BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018290
(358 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255569692|ref|XP_002525811.1| LysM domain GPI-anchored protein 2 precursor, putative [Ricinus
communis]
gi|223534898|gb|EEF36585.1| LysM domain GPI-anchored protein 2 precursor, putative [Ricinus
communis]
Length = 361
Score = 353 bits (905), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 244/344 (70%), Gaps = 10/344 (2%)
Query: 22 LSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ST+ FKC++ +++ C AL+ Y+PPN T++S +++LF+VKNLRSILGANN P TP N
Sbjct: 21 ISTSAPFKCTSSSSSTCHALIDYIPPNTTSLSSLKTLFSVKNLRSILGANNLPLSTPSNN 80
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+VPAQ IK+P CICSNGTG+S+ P+Y V+ D LD IAR +F L+ +Q+I N+I
Sbjct: 81 NVPAQTTIKIPFPCICSNGTGISNSKPIYIVQPGDILDHIAREVFSGLVTFQEIAAVNSI 140
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
+ ++I+ GQ L IPLPCSCD+V +VVHY H+VE GS+ +IA+++GT +D LM LN
Sbjct: 141 PDANVIEAGQKLRIPLPCSCDEVGGERVVHYGHIVESGSTLEVIAEEYGTSKDILMSLNN 200
Query: 202 IHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTL 261
+D+ L+AG+ LDVPL+ACNSS+ S D L V NGTY FTANSCV+C+CD+ NNW L
Sbjct: 201 GVNDTSLLAGQILDVPLQACNSSVTTSSLDYPLLVPNGTYAFTANSCVRCKCDSANNWIL 260
Query: 262 QCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTL 321
QC+PS + NS W TCP M C +++LSIGN+T + CN TTC YAG++N +ILT L
Sbjct: 261 QCEPSGLTIA--NSTWSTCPPMKCDGADNLSIGNSTNA-GCNTTTCAYAGFSNQTILTAL 317
Query: 322 NSLSTCPSPS------NNASRIG-SWNLLLISIFLVLLHFHLIQ 358
++STCP+ + N AS G SW L+IS+ L LL + +Q
Sbjct: 318 ATVSTCPASTPGSGSDNYASSSGMSWKFLIISLHLFLLCVYPLQ 361
>gi|359474985|ref|XP_002278760.2| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis
vinifera]
Length = 353
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 195/366 (53%), Positives = 242/366 (66%), Gaps = 21/366 (5%)
Query: 1 MGNFQLKLVLLLFTVCAALSTLSTAQ-DFKCSAQTAARCQALVGYLPPNKTTISEIQSLF 59
MG+ L L L +V L T AQ FKCS+ C ALVGY+ PN TT+S IQ+LF
Sbjct: 1 MGSATLLLALSFLSV---LITAPRAQASFKCSS--GPTCNALVGYVSPNTTTLSAIQTLF 55
Query: 60 TVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLD 119
VKN R++LGAN+ P TP N SV A+ I +P C CSNGTG+S+ PVYTV+KDDGL
Sbjct: 56 GVKNFRTLLGANSLPASTPTNQSVAAKDKIVIPFRCRCSNGTGISNHRPVYTVQKDDGLY 115
Query: 120 FIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEG 179
IA +F L+ YQ+I NNIS+ +LI++GQ L IPLPCSCD+V+ +KVVHY HVVE G
Sbjct: 116 HIAAEVFAGLVTYQEIQAVNNISDANLIEVGQELWIPLPCSCDEVNESKVVHYGHVVESG 175
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANG 239
SS A IA+K+GT +TL++LN I D L AG+ LDVPLKAC S +K S D L ++NG
Sbjct: 176 SSVAEIAEKYGTTEETLLELNNITDPKNLKAGDVLDVPLKACTSVVKNTSLDYPLLLSNG 235
Query: 240 TYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTS 299
TY +TAN+CVKCQC + NNWTLQC+ S ++ TCPSM CG S LSIGN +TS
Sbjct: 236 TYAYTANNCVKCQCYSANNWTLQCEQSGLNITN-----GTCPSMECGSS-GLSIGN-STS 288
Query: 300 NNCNRTTCEYAGYNNLSILTTLNSLSTCPSPSNN---ASRI----GSWNLLLISIFLVLL 352
CNRTTC YAGY N +I T+L STC S +N AS+I WN + I LV+L
Sbjct: 289 TTCNRTTCAYAGYTNQTIFTSLVE-STCSSTNNAPSYASKITLPSWRWNFVFIVSQLVML 347
Query: 353 HFHLIQ 358
+ H Q
Sbjct: 348 YLHHSQ 353
>gi|297744533|emb|CBI37795.3| unnamed protein product [Vitis vinifera]
Length = 367
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/338 (54%), Positives = 230/338 (68%), Gaps = 17/338 (5%)
Query: 28 FKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQK 87
FKCS+ C ALVGY+ PN TT+S IQ+LF VKN R++LGAN+ P TP N SV A+
Sbjct: 17 FKCSS--GPTCNALVGYVSPNTTTLSAIQTLFGVKNFRTLLGANSLPASTPTNQSVAAKD 74
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
I +P C CSNGTG+S+ PVYTV+KDDGL IA +F L+ YQ+I NNIS+ +LI
Sbjct: 75 KIVIPFRCRCSNGTGISNHRPVYTVQKDDGLYHIAAEVFAGLVTYQEIQAVNNISDANLI 134
Query: 148 QIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSK 207
++GQ L IPLPCSCD+V+ +KVVHY HVVE GSS A IA+K+GT +TL++LN I D
Sbjct: 135 EVGQELWIPLPCSCDEVNESKVVHYGHVVESGSSVAEIAEKYGTTEETLLELNNITDPKN 194
Query: 208 LIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQ 267
L AG+ LDVPLKAC S +K S D L ++NGTY +TAN+CVKCQC + NNWTLQC+ S
Sbjct: 195 LKAGDVLDVPLKACTSVVKNTSLDYPLLLSNGTYAYTANNCVKCQCYSANNWTLQCEQSG 254
Query: 268 FQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLNSLSTC 327
++ TCPSM CG S LSIGN +TS CNRTTC YAGY N +I T+L STC
Sbjct: 255 LNITN-----GTCPSMECGSS-GLSIGN-STSTTCNRTTCAYAGYTNQTIFTSLVE-STC 306
Query: 328 PSPSNN---ASRI----GSWNLLLISIFLVLLHFHLIQ 358
S +N AS+I WN + I LV+L+ H Q
Sbjct: 307 SSTNNAPSYASKITLPSWRWNFVFIVSQLVMLYLHHSQ 344
>gi|225428159|ref|XP_002278742.1| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis
vinifera]
gi|297744534|emb|CBI37796.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 228/325 (70%), Gaps = 14/325 (4%)
Query: 28 FKCSAQT-AARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQ 86
F C++ T + C AL+ Y+ PN TT+S IQ+LF VKNLR++LGAN+ P T N SV A+
Sbjct: 26 FTCNSTTRSTTCSALIDYVSPNTTTLSAIQTLFDVKNLRTLLGANSLPTSTSPNQSVAAK 85
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
I +P C CSNGTG+S+ PVYTV+KDDGL IA +F L+ YQ+I NNIS+ +L
Sbjct: 86 DKIVIPFRCRCSNGTGISNHRPVYTVQKDDGLYHIAAEVFAGLVTYQEIQAVNNISDANL 145
Query: 147 IQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
I++GQ L IPLPCSCD+V+ +KVVHY HVVE GSS LIA+++GT ++TL++LNGI D
Sbjct: 146 IEVGQELWIPLPCSCDEVNGSKVVHYGHVVEAGSSVELIAEEYGTTQETLLRLNGITDPK 205
Query: 207 KLIAGEPLDVPLKACNSSIK-ADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKP 265
L AG LDVPLKAC S + +S D L VANGTY +TANSCV C+CD+ NNWTLQC+P
Sbjct: 206 NLQAGAVLDVPLKACTSMVANNNSLDYPLLVANGTYVYTANSCVMCKCDSANNWTLQCEP 265
Query: 266 SQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLNSLS 325
SQ + S+ +TCPSM C + SL IGN +TS CNRTTC YAGY + ILTTL +
Sbjct: 266 SQLKLSN-----RTCPSMQC-EGSSLYIGN-STSAGCNRTTCAYAGYTSQMILTTLVEGN 318
Query: 326 TCPSPSNNASRIG----SWNLLLIS 346
C S SN+A +IG SW L IS
Sbjct: 319 AC-SASNDAQKIGLQVWSWAFLFIS 342
>gi|224078525|ref|XP_002305553.1| predicted protein [Populus trichocarpa]
gi|222848517|gb|EEE86064.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 228/322 (70%), Gaps = 13/322 (4%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSI 67
L L+LF + L + S++Q FKC+ T C +L+ Y+ PN TT+S I++LF+VKN+ SI
Sbjct: 1 LTLILF---STLHSRSSSQTFKCT--TPTTCHSLIDYISPNATTLSHIKTLFSVKNIHSI 55
Query: 68 LGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFG 127
L ANN P T N ++ A + IK+ C C N TG S+K P+YTV+KDDGL IA +F
Sbjct: 56 LAANNLPLSTLPNSTISANQTIKISFPCTCINNTGHSNKQPIYTVQKDDGLFHIAAEVFS 115
Query: 128 QLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQ 187
L+ YQ+I NNIS+ +LI++GQ L IPLPC+CDDVD KVVHY HVVE GSS LIAQ
Sbjct: 116 GLVTYQEIAAVNNISDVNLIKVGQKLLIPLPCNCDDVDGVKVVHYGHVVEAGSSLELIAQ 175
Query: 188 KFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANS 247
++GT DTL+KLNG+ +DS L+AG+ LDVPL+ACNSS+ +DS D L V N TY FTAN+
Sbjct: 176 EYGTSTDTLVKLNGV-NDSSLLAGQVLDVPLQACNSSVTSDSVDYPLLVPNNTYFFTANN 234
Query: 248 CVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTC 307
CVKC+CDA NNWTLQC+ S +P S W TCP+M C + LSI N+TTS CN TTC
Sbjct: 235 CVKCKCDAANNWTLQCEASGIKP----SNWSTCPAMQC-EGGLLSINNSTTS-GCNITTC 288
Query: 308 EYAGYN-NLSILTTLNSLSTCP 328
YAG+N N SI TTL + STCP
Sbjct: 289 AYAGFNKNQSIFTTLATRSTCP 310
>gi|224105073|ref|XP_002313676.1| predicted protein [Populus trichocarpa]
gi|222850084|gb|EEE87631.1| predicted protein [Populus trichocarpa]
Length = 351
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/362 (54%), Positives = 252/362 (69%), Gaps = 16/362 (4%)
Query: 1 MGNFQLKLVLLLFTVCAALSTLSTAQD-FKCSAQTAARCQALVGYLPPNKTTISEIQSLF 59
MG F + L+ LLF ++ +T+S AQ FKC T C++LVGY PN T+IS IQ LF
Sbjct: 1 MG-FAIILMCLLFY--SSFTTISVAQQAFKCREGTT--CRSLVGYKSPNTTSISSIQKLF 55
Query: 60 TVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLD 119
VKNL S+LGANN T N+ + Q+ IK+PI CIC NGTG S+K+P+YTV+ DDGL
Sbjct: 56 GVKNLHSLLGANNLRSSTSPNYVIQEQQVIKIPIPCICFNGTGASNKMPIYTVQPDDGLY 115
Query: 120 FIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEG 179
+IA +F LL +Q+I + N I NP++I +GQ L IPLPCSC++V+ +VVHYAH+VEEG
Sbjct: 116 YIANNVFMGLLAHQRIQQVNRIENPNVIYVGQELWIPLPCSCEEVEGERVVHYAHLVEEG 175
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANG 239
S+ IA+KFGT DTL +LNGI ++S+LIA DVPLKACNSS++ DS D+ V N
Sbjct: 176 STVEEIAEKFGTTNDTLYRLNGITNNSQLIAATAFDVPLKACNSSVRIDSLDSPFLVPNN 235
Query: 240 TYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTS 299
TY FTAN+CVKC+CDA NNWTLQC+PS +PSS W CP+M C + L+IGNTTTS
Sbjct: 236 TYFFTANNCVKCKCDAANNWTLQCEPSGKKPSS----WSACPAMQC-EGGLLTIGNTTTS 290
Query: 300 NNCNRTTCEYAGYN-NLSILTTLNSLSTCP--SPSNNASRIG-SWNLLLISIFLVLLHFH 355
N TTC YAG++ + +I T L + ST P SP N ASRIG S N L I I ++LL +
Sbjct: 291 GC-NTTTCAYAGFSGDQNIFTALATQSTSPGGSPGNFASRIGLSRNYLFICIHMILLLVY 349
Query: 356 LI 357
L+
Sbjct: 350 LL 351
>gi|297832316|ref|XP_002884040.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329880|gb|EFH60299.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 356
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 183/348 (52%), Positives = 234/348 (67%), Gaps = 11/348 (3%)
Query: 4 FQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKN 63
F L +L+ F+ LS T +F CS T+ C +LVGY N TT+ IQ+LF VKN
Sbjct: 6 FTLINLLVSFSFFLTLSAQMTG-NFNCSGSTST-CLSLVGYSSKNATTLRNIQTLFAVKN 63
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
LRSILGANN P T R+ V + +++PIHC CSNGTGVS++ YT+KKDD L F+A
Sbjct: 64 LRSILGANNLPLNTTRDQRVNPNQVVRIPIHCSCSNGTGVSNRDIEYTIKKDDTLSFVAT 123
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFA 183
IFG L+ YQKI E N I +P+ I+IGQ IPLPCSCD ++ VVHYAHVV+ GSS
Sbjct: 124 EIFGGLVTYQKISEVNKIPDPNKIEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSLR 183
Query: 184 LIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTF 243
IA +FGTD TL +LNGI DS+L+A PL+VPLKAC+SS++ DS D L ++N +Y F
Sbjct: 184 EIAAQFGTDNTTLAQLNGIIGDSQLLADNPLNVPLKACSSSVRNDSLDAPLLLSNNSYAF 243
Query: 244 TANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCN 303
TAN+C+KC CDA NWTL C+PSQ +PS NS W TCP C +ESL +GNTT+S +C
Sbjct: 244 TANTCIKCSCDALKNWTLSCEPSQIRPS--NSTWPTCPPSRCEGAESLFLGNTTSS-SCG 300
Query: 304 RTTCEYAGYNNLSILTTLNSLSTCP---SPSNNASRI-GSWNLLLISI 347
+C YAGY+N +I TTL+ TCP P N AS S+N +++ I
Sbjct: 301 PRSCTYAGYSNQTIFTTLS--PTCPDSAGPGNYASTFSSSFNFVMVLI 346
>gi|449454275|ref|XP_004144881.1| PREDICTED: lysM domain-containing GPI-anchored protein 2-like
[Cucumis sativus]
gi|449473230|ref|XP_004153824.1| PREDICTED: lysM domain-containing GPI-anchored protein 2-like
[Cucumis sativus]
gi|449500176|ref|XP_004161025.1| PREDICTED: lysM domain-containing GPI-anchored protein 2-like
[Cucumis sativus]
Length = 365
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 237/359 (66%), Gaps = 12/359 (3%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSI 67
LL+F+ A LS T F CS + ++C +L+ Y+ PN TTI +Q LF VK+L S+
Sbjct: 11 FTLLVFSAIATLSLAQTPPRFNCS--STSKCHSLIDYISPNATTIGAVQKLFQVKHLLSL 68
Query: 68 LGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFG 127
LGANN P T NFS+PA + IK+P +C C+NGTG+SDK P+YTV+ D LD IA F
Sbjct: 69 LGANNLPANTLSNFSLPASRKIKIPFNCKCNNGTGLSDKRPIYTVQSGDSLDKIAEVTFA 128
Query: 128 QLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQ 187
+L+ + +I AN I +P I +GQ L IPLPCSCD+VD +VVHY H+VE GSS + IA
Sbjct: 129 RLVTFLQIQIANEIPDPRKIDVGQELWIPLPCSCDEVDGNRVVHYGHLVEMGSSISAIAG 188
Query: 188 KFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANS 247
++ +T++KLNGI D L A + LD+PLKAC+S I+ DS D ++N TY +TAN+
Sbjct: 189 RYNVSEETILKLNGIADPKGLQASQVLDIPLKACSSVIRQDSLDFPFLLSNDTYDYTANN 248
Query: 248 CVKCQCDATNNWTLQCKPSQFQP-SSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTT 306
CV CQCDA NW L CKPS +P S +S W +CP+M C + +L +GN+T S +CN TT
Sbjct: 249 CVLCQCDAAKNWILDCKPSPLKPSSVKSSNWSSCPTMAC-EGSNLLLGNSTAS-DCNTTT 306
Query: 307 CEYAGYNNLSILTTLNSLSTCPSPSNN---ASRIGSWNL---LLISIFLVL-LHFHLIQ 358
C YAG++ +I T +++L+TCP PS+N ASR GS L L++I VL L LIQ
Sbjct: 307 CAYAGFSKQTIFTNISTLNTCPGPSDNGNGASRTGSQGLNLAYLVAITHVLALSLLLIQ 365
>gi|338815365|gb|AEJ08745.1| RSI3 [Solanum tuberosum]
Length = 354
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/334 (49%), Positives = 217/334 (64%), Gaps = 11/334 (3%)
Query: 19 LSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP 78
L LS+ + S +A C A++ Y PN TT + ++ LF VKNLRS+LG NN P TP
Sbjct: 14 LVWLSSPAEASFSCTSAGTCDAIIDYTLPNATTFNAVKKLFNVKNLRSLLGVNNLPVNTP 73
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
+ +PA + IK+P C+C NGTG+++K P+YTV D L I IF L Q++
Sbjct: 74 ADHKLPANQTIKIPFPCLCRNGTGIANKRPIYTVVSGDFLSHIVTDIFAGLFTVQELQTV 133
Query: 139 NNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMK 198
NNISNP+LIQ G L IPLPCSCDDVD KVVHY +V G+S IAQ++ ++TL++
Sbjct: 134 NNISNPNLIQPGDKLWIPLPCSCDDVDGEKVVHYGRLVSSGNSIEAIAQQYNVSQETLLR 193
Query: 199 LNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNN 258
LNG+ +L+AG LDVPLKAC S++ S D L V N TY FTA +CV C+CDA +N
Sbjct: 194 LNGLASPRELLAGAVLDVPLKACQSTVSNASLDYPLLVPNDTYVFTAANCVTCKCDAASN 253
Query: 259 WTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSIL 318
WTLQC+PSQ + +S WKTCPSM C ++L IGN TTS+ CN T+C YAGY+N +I
Sbjct: 254 WTLQCQPSQIK----SSLWKTCPSMQCQGLDNLYIGNVTTSSECNSTSCAYAGYSNQTIF 309
Query: 319 TTLNSLSTCPSPSNNA--SRIGS----WNLLLIS 346
TT L TCP+ N+A R G+ WN++L++
Sbjct: 310 TTSTQL-TCPASDNSALGMRPGTWGWRWNVILVA 342
>gi|28207683|gb|AAO32065.1| Erwinia induced protein 1 [Solanum tuberosum]
Length = 354
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/334 (48%), Positives = 216/334 (64%), Gaps = 11/334 (3%)
Query: 19 LSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP 78
L LS+ + S +A C A++ Y PN TT + ++ LF VKNLRS+LG NN P TP
Sbjct: 14 LVWLSSPAEASFSCTSAGTCDAIIDYTLPNATTFNAVKKLFNVKNLRSLLGVNNLPVNTP 73
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
+ +PA + IK+P C+C NGTG+++K P+YTV D L I IF L Q++
Sbjct: 74 ADHKLPANQTIKIPFPCLCRNGTGIANKRPIYTVVSGDFLSHIVTDIFAGLFTVQELQTV 133
Query: 139 NNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMK 198
NNISNP+LIQ G L IPLPCSCDDVD KVVHY +V G+S IAQ++ ++TL++
Sbjct: 134 NNISNPNLIQPGDKLWIPLPCSCDDVDGEKVVHYGRLVISGNSIEAIAQQYNVSQETLLR 193
Query: 199 LNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNN 258
LNG+ +L+AG LDVPLKAC S++ S D L V N TY FTA +CV C+CDA +N
Sbjct: 194 LNGLASPKELLAGAVLDVPLKACQSTVSNASLDYPLLVPNDTYVFTAANCVTCKCDAASN 253
Query: 259 WTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSIL 318
WTLQC+PSQ + +S WKTCPSM C ++L I N TTS+ CN T+C YAGY+N +I
Sbjct: 254 WTLQCQPSQIK----SSLWKTCPSMQCQGLDNLYIENVTTSSECNSTSCAYAGYSNQTIF 309
Query: 319 TTLNSLSTCPSPSNNA--SRIGS----WNLLLIS 346
TT L TCP+ N+A R G+ WN++L++
Sbjct: 310 TTSTQL-TCPASDNSALGMRPGTWGWRWNVILVA 342
>gi|147836328|emb|CAN62195.1| hypothetical protein VITISV_025519 [Vitis vinifera]
Length = 339
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/322 (53%), Positives = 208/322 (64%), Gaps = 25/322 (7%)
Query: 1 MGNFQLKLVLLLFTVCAALSTLSTAQ-DFKCSAQTAARCQALVGYLPPNKTTISEIQSLF 59
MG+ L L L +V L T AQ FKCS+ C ALVGY+ PN TT+S IQ+LF
Sbjct: 1 MGSATLLLALSFLSV---LITAPRAQASFKCSS--GPTCNALVGYVSPNTTTLSAIQTLF 55
Query: 60 TVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLD 119
VKN R++LGAN+ P TP N SV A+ I +P C CSNGTG+S+ PVYTV+KDDGL
Sbjct: 56 GVKNFRTLLGANSLPASTPTNQSVAAKDKIVIPFRCRCSNGTGISNHRPVYTVQKDDGLY 115
Query: 120 FIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEG 179
IA +F L+ YQ+I GQ L IPLPCSCD+V+ +KVVHY HVVE G
Sbjct: 116 HIAAEVFAGLVTYQEI------------SGGQELWIPLPCSCDEVNGSKVVHYGHVVESG 163
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANG 239
SS IA+K+GT + L++LNGI D L AG LDVPLKAC S +K S D L ++NG
Sbjct: 164 SSVKEIAEKYGTTEEKLLELNGITDPKNLQAGAVLDVPLKACTSVVKNTSLDYPLLLSNG 223
Query: 240 TYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTS 299
TY +TAN+CVKCQC + NNWTLQC+ S N TCPSM CG S LSIGN +TS
Sbjct: 224 TYAYTANNCVKCQCHSANNWTLQCEQSGL-----NITNGTCPSMECGSS-GLSIGN-STS 276
Query: 300 NNCNRTTCEYAGYNNLSILTTL 321
CNRTTC YAGY N +I T+L
Sbjct: 277 TTCNRTTCAYAGYTNQTIFTSL 298
>gi|18398317|ref|NP_565406.1| LysM domain-containing GPI-anchored protein 2 [Arabidopsis
thaliana]
gi|38257899|sp|O23006.1|LYM2_ARATH RecName: Full=LysM domain-containing GPI-anchored protein 2;
AltName: Full=Chitin elicitor-binding protein LYM2;
Short=CEBiP LYM2; Flags: Precursor
gi|16226689|gb|AAL16233.1|AF428464_1 delta-8 sphingolipid desaturase [Arabidopsis thaliana]
gi|15810365|gb|AAL07070.1| unknown protein [Arabidopsis thaliana]
gi|21928083|gb|AAM78070.1| At2g17120 [Arabidopsis thaliana]
gi|330251493|gb|AEC06587.1| LysM domain-containing GPI-anchored protein 2 [Arabidopsis
thaliana]
Length = 350
Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 172/350 (49%), Positives = 224/350 (64%), Gaps = 21/350 (6%)
Query: 4 FQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKN 63
F L +L+ + LS T +F CS T+ CQ+LVGY N TT+ IQ+LF VKN
Sbjct: 6 FTLLGLLVSLSFFLTLSAQMTG-NFNCSGSTST-CQSLVGYSSKNATTLRNIQTLFAVKN 63
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
LRSILGANN P T R+ V + ++VPIHC CSNGTGVS++ YT+KKDD L F+A
Sbjct: 64 LRSILGANNLPLNTSRDQRVNPNQVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVAT 123
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFA 183
IFG L+ Y+KI E N I +P+ I+IGQ IPLPCSCD ++ VVHYAHVV+ GSS
Sbjct: 124 EIFGGLVTYEKISEVNKIPDPNKIEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSLG 183
Query: 184 LIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTF 243
IA +FGTD TL +LNGI DS+L+A +PLDVPLKAC+SS++ DS D L ++N +Y F
Sbjct: 184 EIAAQFGTDNTTLAQLNGIIGDSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYVF 243
Query: 244 TANSCVKCQCDATNNWTLQCK-PSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNC 302
TAN+CVKC CDA NWTL C+ S+ +PS+ W+TCP D L+ +C
Sbjct: 244 TANNCVKCTCDALKNWTLSCQSSSEIKPSN----WQTCPPFSQCDGALLNA-------SC 292
Query: 303 NR-TTCEYAGYNNLSILTTLNSLSTCP---SPSNNASRI-GSWNLLLISI 347
+ C YAGY+N +I TT + CP P N AS + S+N +++ I
Sbjct: 293 RQPRDCVYAGYSNQTIFTTAS--PACPDSAGPDNYASTLSSSFNFVIVLI 340
>gi|147805165|emb|CAN68930.1| hypothetical protein VITISV_040617 [Vitis vinifera]
Length = 414
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 165/337 (48%), Positives = 217/337 (64%), Gaps = 25/337 (7%)
Query: 28 FKCSAQT-AARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQ 86
F C++ T + C AL+ Y+ PN TT+S IQ+LF VKNLR++LGAN+ P T N SV A+
Sbjct: 26 FTCNSXTRSTTCSALIDYVSPNTTTLSAIQTLFDVKNLRTLLGANSLPTSTSPNQSVAAK 85
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
I +P C CSNGTG+S+ PVYTV+KDDGL IA +F L+ YQ+I NNIS+ BL
Sbjct: 86 DKIVIPFRCRCSNGTGISNHRPVYTVQKDDGLYHIAAEVFAGLVTYQEIQAVNNISDABL 145
Query: 147 IQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
I++GQ L IPLPCSCD+V+ +KVVHY HVVE GSS LIA+ +GT +T+ K +
Sbjct: 146 IEVGQELWIPLPCSCDEVNGSKVVHYGHVVEXGSSVELIAEXYGTTZETVTKTLFL---- 201
Query: 207 KLIAGEPLDVPLKACNSSIK-ADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKP 265
++ G ++C S + +S D L VABG Y +TANSCV C+CD+ NNWTLQC+P
Sbjct: 202 -IVEG------YESCTSMVANNNSLDYPLLVABGXYVYTANSCVMCKCDSANNWTLQCEP 254
Query: 266 SQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLNSLS 325
SQ + S+ +TCPSM C + SL IGN +TS CN+TTC Y GY + ILTTL +
Sbjct: 255 SQLKLSN-----RTCPSMQC-EGSSLYIGN-STSAGCNQTTCAYXGYTSQMILTTLVEEN 307
Query: 326 TCPSPSNNASRIG----SWNLLLISIFLVLLHFHLIQ 358
TC S N+A +IG SW L IS L+ L
Sbjct: 308 TC-SARNDAQKIGLQVWSWGFLFISCQLLSLGLQFFH 343
>gi|21593990|gb|AAM65912.1| unknown [Arabidopsis thaliana]
Length = 350
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/318 (51%), Positives = 208/318 (65%), Gaps = 19/318 (5%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQ 86
+F CS T+ CQ+LVGY N TT+ IQ+LF VKNLRSILGANN P T R+ V
Sbjct: 28 NFNCSGSTST-CQSLVGYSSKNATTLRNIQTLFAVKNLRSILGANNLPLNTSRDQRVNPN 86
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
+ ++VPIHC CSNGTGVS++ YT+KKDD L F+A IFG L+ Y+KI E N I +P+
Sbjct: 87 QVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIPDPNK 146
Query: 147 IQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
I+IGQ IPLPCSCD ++ VVHYAHVV+ SS IA +FGTD TL +LNGI DS
Sbjct: 147 IEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLXSSLGEIAAQFGTDNTTLAQLNGIIGDS 206
Query: 207 KLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCK-P 265
+L+A +PLDVPLKAC+SS++ DS D L ++N +Y FTAN+CVKC CDA NWTL C+
Sbjct: 207 QLLADKPLDVPLKACSSSVRNDSLDAPLLLSNNSYVFTANNCVKCTCDALKNWTLSCQSS 266
Query: 266 SQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNR-TTCEYAGYNNLSILTTLNSL 324
S+ +PS+ W+TCP D L+ +C R C YAGY+N +I TT +
Sbjct: 267 SEIKPSN----WQTCPPFSQCDRALLNA-------SCRRPRDCVYAGYSNQTIFTTAS-- 313
Query: 325 STCP---SPSNNASRIGS 339
CP P N AS + S
Sbjct: 314 PACPDSAGPGNYASTLSS 331
>gi|84468398|dbj|BAE71282.1| putative receptor-like GPI-anchored protein 2 [Trifolium pratense]
Length = 365
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 221/368 (60%), Gaps = 18/368 (4%)
Query: 2 GNFQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTV 61
GN + L+ V A + +F+C + A C+++ Y PN TT+ EI +LF +
Sbjct: 4 GNKMFPIWLITIAVVVASTQAQPEVNFQCKTENAT-CRSITEYTNPNTTTLKEIATLFGI 62
Query: 62 KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI 121
K+ LGANN P T ++ V IKVP C C+NGTG S+ VP Y +K DGLD I
Sbjct: 63 KHYLDFLGANNLPTNTQNSYKVSPNTVIKVPFPCKCNNGTGKSNHVPKYKIKPGDGLDAI 122
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSS 181
ART F L+KYQ+I AN I + + I G + IPLPCSCD VD V+HYAH+VE GSS
Sbjct: 123 ARTRFAGLVKYQQIQTANKIVDANNITAGDTIWIPLPCSCDKVDGNSVMHYAHIVESGSS 182
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTY 241
IAQ++GT + +L+ +NGI D L AG+ LDVPL CNSS+K+DS D L V NGTY
Sbjct: 183 IDSIAQEYGTTQLSLLTINGIKDPKTLEAGQLLDVPLPVCNSSVKSDSIDFPLLVPNGTY 242
Query: 242 TFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNN 301
+TAN CVKC+CD+ NN+ LQC+PS +P + W CPS C S S+ IGNTT++++
Sbjct: 243 FYTANQCVKCKCDSINNFMLQCEPSNQKPI---NNWSVCPSARC--SASVLIGNTTSTDS 297
Query: 302 CNRTTCEYAGYNNLSILTTLNSLSTCP--------SPSNNASRI----GSWNLLLISIFL 349
CNRT C+Y+GY + +I T L + + C + ASR WN LL+ I
Sbjct: 298 CNRTVCDYSGYTSSNISTVLVTQNACAVTPSSGGGDSDSGASRSILNGWVWNKLLVLIHS 357
Query: 350 VLLHFHLI 357
+L +L+
Sbjct: 358 LLFFVYLL 365
>gi|356512225|ref|XP_003524821.1| PREDICTED: lysM domain-containing GPI-anchored protein 2-like
[Glycine max]
Length = 375
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 198/300 (66%), Gaps = 6/300 (2%)
Query: 28 FKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQK 87
F C++ C+AL+ Y PN TT+ +IQ LF VK++ I+GANN P + ++V +
Sbjct: 36 FNCNSANIPTCRALISYSHPNTTTLGDIQKLFNVKHILDIVGANNLPSNATKTYAVGPNE 95
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
+KVP C CSN TG+SD+VP+Y +KK D L +IA T F L+K+ +I ANNI+N + I
Sbjct: 96 VVKVPFPCRCSNNTGLSDRVPLYRIKKGDTLYYIATTTFAGLMKWPQIQVANNIANANNI 155
Query: 148 QIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSK 207
G L IPLPCSCD+V VVHYAH+V S+ IA++FGT + L+ LNGI D
Sbjct: 156 TTGDMLYIPLPCSCDEVGGKSVVHYAHLVAPQSTVEGIAEEFGTTQQILLNLNGISDPKN 215
Query: 208 LIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQ 267
L AG+ LDVPL+AC+S++K DS D L V N TY +TA+ CVKC+CD++NN+ LQC+PSQ
Sbjct: 216 LQAGQILDVPLQACSSNVKNDSLDYPLLVPNATYAYTAHECVKCKCDSSNNFILQCEPSQ 275
Query: 268 FQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLNSLSTC 327
+P++ W CPSM C S ++ IG T +S++CNRTTC Y GY +I + +TC
Sbjct: 276 LKPTN----WSVCPSMEC--SANVLIGKTISSDSCNRTTCAYTGYRFHNISAEAVTENTC 329
>gi|358348520|ref|XP_003638293.1| LysM domain-containing GPI-anchored protein [Medicago truncatula]
gi|355504228|gb|AES85431.1| LysM domain-containing GPI-anchored protein [Medicago truncatula]
Length = 372
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 200/321 (62%), Gaps = 8/321 (2%)
Query: 9 VLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSIL 68
V+L+ +V ++ +FKC + A C++L Y N TT+ EI +LF VK+ +L
Sbjct: 17 VVLVASVGITVTEAQPEANFKCLTENAT-CRSLTDYTSTNSTTLKEIATLFGVKHFLDLL 75
Query: 69 GANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQ 128
GANN P T ++ V + IKVP C CSN TG S+ VP Y + D LD IAR F
Sbjct: 76 GANNLPSNTNNSYKVNPNQVIKVPFPCKCSNRTGTSNHVPRYKIVPGDTLDAIARVRFAG 135
Query: 129 LLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQK 188
L+KYQ+I AN I + + I G + IPLPCSCD VD V+HYAH+V GSS IAQ+
Sbjct: 136 LVKYQQIQTANKIPDANNITAGATIWIPLPCSCDPVDGTSVMHYAHIVPMGSSIQSIAQQ 195
Query: 189 FGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSC 248
+ + TL+ LN + D L+AG+ LDVPL CNSSIK+DS D L V N TY +TA+ C
Sbjct: 196 YAISQQTLLSLNDLDDPKNLLAGQLLDVPLPVCNSSIKSDSLDFPLLVPNATYFYTAHEC 255
Query: 249 VKCQCDAT-NNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTC 307
VKC+CD+T +N LQC+ S +P + W CPS+ C S S+ +GNTT++++C+R C
Sbjct: 256 VKCKCDSTGDNKNLQCEASNLKPI---NNWSVCPSLKC--SGSVLLGNTTSTDSCSRRVC 310
Query: 308 EYAGY-NNLSILTTLNSLSTC 327
+Y GY ++ +I TTL + +TC
Sbjct: 311 DYTGYTSSRNISTTLATQNTC 331
>gi|358348516|ref|XP_003638291.1| LysM domain-containing GPI-anchored protein [Medicago truncatula]
gi|355504226|gb|AES85429.1| LysM domain-containing GPI-anchored protein [Medicago truncatula]
Length = 333
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 200/321 (62%), Gaps = 8/321 (2%)
Query: 9 VLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSIL 68
V+L+ +V ++ +FKC + A C++L Y N TT+ EI +LF VK+ +L
Sbjct: 17 VVLVASVGITVTEAQPEANFKCLTENAT-CRSLTDYTSTNSTTLKEIATLFGVKHFLDLL 75
Query: 69 GANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQ 128
GANN P T ++ V + IKVP C CSN TG S+ VP Y + D LD IAR F
Sbjct: 76 GANNLPSNTNNSYKVNPNQVIKVPFPCKCSNRTGTSNHVPRYKIVPGDTLDAIARVRFAG 135
Query: 129 LLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQK 188
L+KYQ+I AN I + + I G + IPLPCSCD VD V+HYAH+V GSS IAQ+
Sbjct: 136 LVKYQQIQTANKIPDANNITAGATIWIPLPCSCDPVDGTSVMHYAHIVPMGSSIQSIAQQ 195
Query: 189 FGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSC 248
+ + TL+ LN + D L+AG+ LDVPL CNSSIK+DS D L V N TY +TA+ C
Sbjct: 196 YAISQQTLLSLNDLDDPKNLLAGQLLDVPLPVCNSSIKSDSLDFPLLVPNATYFYTAHEC 255
Query: 249 VKCQCDAT-NNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTC 307
VKC+CD+T +N LQC+ S +P + W CPS+ C S S+ +GNTT++++C+R C
Sbjct: 256 VKCKCDSTGDNKNLQCEASNLKPI---NNWSVCPSLKC--SGSVLLGNTTSTDSCSRRVC 310
Query: 308 EYAGY-NNLSILTTLNSLSTC 327
+Y GY ++ +I TTL + +TC
Sbjct: 311 DYTGYTSSRNISTTLATQNTC 331
>gi|217071778|gb|ACJ84249.1| unknown [Medicago truncatula]
Length = 389
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 200/321 (62%), Gaps = 8/321 (2%)
Query: 9 VLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSIL 68
V+L+ +V ++ +FKC + A C++L Y N TT+ EI +LF VK+ +L
Sbjct: 17 VVLVASVGITVTEAQPEANFKCLTENAT-CRSLTDYTSTNSTTLKEIATLFGVKHFLDLL 75
Query: 69 GANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQ 128
GANN P T ++ V + IKVP C CSN TG S+ VP Y + D LD IAR F
Sbjct: 76 GANNLPSNTNNSYKVNPNQVIKVPFPCKCSNRTGTSNHVPRYKIVPGDTLDAIARVRFAG 135
Query: 129 LLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQK 188
L+KYQ+I AN I + + I G + IPLPCSCD VD V+HYAH+V GSS IAQ+
Sbjct: 136 LVKYQQIQTANKIPDANNITAGATIWIPLPCSCDLVDGTSVMHYAHIVPMGSSIQSIAQQ 195
Query: 189 FGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSC 248
+ + TL+ LN + D L+AG+ LDVPL CNSSIK+DS D L V N TY +TA+ C
Sbjct: 196 YAISQQTLLSLNDLDDPKNLLAGQLLDVPLPVCNSSIKSDSLDFPLLVPNATYFYTAHEC 255
Query: 249 VKCQCDAT-NNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTC 307
VKC+CD+T +N LQC+ S +P + W CPS+ C S S+ +GNTT++++C+R C
Sbjct: 256 VKCKCDSTGDNKNLQCEASNLKPI---NNWSVCPSLKC--SGSVLLGNTTSTDSCSRRVC 310
Query: 308 EYAGY-NNLSILTTLNSLSTC 327
+Y GY ++ +I TTL + +TC
Sbjct: 311 DYTGYTSSRNISTTLATQNTC 331
>gi|115480519|ref|NP_001063853.1| Os09g0548200 [Oryza sativa Japonica Group]
gi|113632086|dbj|BAF25767.1| Os09g0548200 [Oryza sativa Japonica Group]
Length = 373
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 216/373 (57%), Gaps = 33/373 (8%)
Query: 1 MGNFQLKLVLL-LFTVCAALSTLSTAQDFKCSAQT--AARCQALVGYLPPNKTTISEIQS 57
M QL VL+ L V AA A F C+A A+ CQALV Y PPN TT++ +++
Sbjct: 5 MAPPQLVSVLVALLCVAAASPAGVGAARFVCNATAPRASTCQALVAYAPPNATTLAAVRA 64
Query: 58 LFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDG 117
LF +++ R++L +N P TP + P+ +++P C+CS G G + + P Y ++ D
Sbjct: 65 LFQLRSHRALLASNGLPLSTPPSAPAPSPLRVRLP--CLCSGGAGATFQRPTYRIRAGDT 122
Query: 118 LDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVE 177
LD IAR +F L+ YQ I ANN+S+P+ I +GQ L IP+PCSCD V VVHY +VV
Sbjct: 123 LDAIARGVFAGLVTYQDIAAANNVSDPNKIAVGQELWIPVPCSCDPVAGQPVVHYTYVVP 182
Query: 178 EGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVA 237
G+S A IAQ F T T++ LN + D L+AG+ LDVPL+AC+S+I + + D L V
Sbjct: 183 PGASVAAIAQDFATTEATVLALNRMPDAKSLLAGQVLDVPLRACSSAISSTAIDRNLLVP 242
Query: 238 NGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT 297
NG+Y TAN+C+ C C + W L C+P+Q SS CP+ CGD + +GNTT
Sbjct: 243 NGSYILTANNCIMCGCS-SYTWQLDCQPTQGISSS------FCPASKCGD---MFLGNTT 292
Query: 298 TS--NNCNRTTCEYAGYNN---LSILTTLNSLSTCPSPS---------NNASRIGS---- 339
TS ++C T C YAGY N +IL L + STC + + ++A R+ S
Sbjct: 293 TSPTSSCESTACSYAGYTNSTSFTILANLTTSSTCNAAAMSPMAQQAHSSAFRLASTWLR 352
Query: 340 WNLLLISIFLVLL 352
W L++ + ++ L
Sbjct: 353 WTELIVCLHVIFL 365
>gi|222642028|gb|EEE70160.1| hypothetical protein OsJ_30230 [Oryza sativa Japonica Group]
Length = 803
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 215/369 (58%), Gaps = 33/369 (8%)
Query: 5 QLKLVLL-LFTVCAALSTLSTAQDFKCSAQT--AARCQALVGYLPPNKTTISEIQSLFTV 61
QL VL+ L V AA A F C+A A+ CQALV Y PPN TT++ +++LF +
Sbjct: 5 QLVSVLVALLCVAAASPAGVGAARFVCNATAPRASTCQALVAYAPPNATTLAAVRALFQL 64
Query: 62 KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI 121
++ R++L +N P TP + P+ +++P C+CS G G + + P Y ++ D LD I
Sbjct: 65 RSHRALLASNGLPLSTPPSAPAPSPLRVRLP--CLCSGGAGATFQRPTYRIRAGDTLDAI 122
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSS 181
AR +F L+ YQ I ANN+S+P+ I +GQ L IP+PCSCD V VVHY +VV G+S
Sbjct: 123 ARGVFAGLVTYQDIAAANNVSDPNKIAVGQELWIPVPCSCDPVAGQPVVHYTYVVPPGAS 182
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTY 241
A IAQ F T T++ LN + D L+AG+ LDVPL+AC+S+I + + D L V NG+Y
Sbjct: 183 VAAIAQDFATTEATVLALNRMPDAKSLLAGQVLDVPLRACSSAISSTAIDRNLLVPNGSY 242
Query: 242 TFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTS-- 299
TAN+C+ C C + W L C+P+Q SS CP+ CGD + +GNTTTS
Sbjct: 243 ILTANNCIMCGCS-SYTWQLDCQPTQGISSS------FCPASKCGD---MFLGNTTTSPT 292
Query: 300 NNCNRTTCEYAGYNN---LSILTTLNSLSTCPSPS---------NNASRIGS----WNLL 343
++C T C YAGY N +IL L + STC + + ++A R+ S W L
Sbjct: 293 SSCESTACSYAGYTNSTSFTILANLTTSSTCNAAAMSPMAQQAHSSAFRLASTWLRWTEL 352
Query: 344 LISIFLVLL 352
++ + ++ L
Sbjct: 353 IVCLHVIFL 361
>gi|52076021|dbj|BAD46474.1| peptidoglycan-binding LysM domain-containing protein -like [Oryza
sativa Japonica Group]
gi|218202571|gb|EEC84998.1| hypothetical protein OsI_32280 [Oryza sativa Indica Group]
Length = 369
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 216/373 (57%), Gaps = 33/373 (8%)
Query: 1 MGNFQLKLVLL-LFTVCAALSTLSTAQDFKCSAQT--AARCQALVGYLPPNKTTISEIQS 57
M QL VL+ L V AA A F C+A A+ CQALV Y PPN TT++ +++
Sbjct: 1 MAPPQLVSVLVALLCVAAASPAGVGAARFVCNATAPRASTCQALVAYAPPNATTLAAVRA 60
Query: 58 LFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDG 117
LF +++ R++L +N P TP + P+ +++P C+CS G G + + P Y ++ D
Sbjct: 61 LFQLRSHRALLASNGLPLSTPPSAPAPSPLRVRLP--CLCSGGAGATFQRPTYRIRAGDT 118
Query: 118 LDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVE 177
LD IAR +F L+ YQ I ANN+S+P+ I +GQ L IP+PCSCD V VVHY +VV
Sbjct: 119 LDAIARGVFAGLVTYQDIAAANNVSDPNKIAVGQELWIPVPCSCDPVAGQPVVHYTYVVP 178
Query: 178 EGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVA 237
G+S A IAQ F T T++ LN + D L+AG+ LDVPL+AC+S+I + + D L V
Sbjct: 179 PGASVAAIAQDFATTEATVLALNRMPDAKSLLAGQVLDVPLRACSSAISSTAIDRNLLVP 238
Query: 238 NGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT 297
NG+Y TAN+C+ C C + W L C+P+Q SS CP+ CGD + +GNTT
Sbjct: 239 NGSYILTANNCIMCGCS-SYTWQLDCQPTQGISSS------FCPASKCGD---MFLGNTT 288
Query: 298 TS--NNCNRTTCEYAGYNN---LSILTTLNSLSTCPSPS---------NNASRIGS---- 339
TS ++C T C YAGY N +IL L + STC + + ++A R+ S
Sbjct: 289 TSPTSSCESTACSYAGYTNSTSFTILANLTTSSTCNAAAMSPMAQQAHSSAFRLASTWLR 348
Query: 340 WNLLLISIFLVLL 352
W L++ + ++ L
Sbjct: 349 WTELIVCLHVIFL 361
>gi|326504418|dbj|BAJ91041.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506282|dbj|BAJ86459.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 382
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 205/345 (59%), Gaps = 30/345 (8%)
Query: 31 SAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIK 90
+A A+ CQALV Y PPN TT++ +++LF +++ R++L +N P + PA P++
Sbjct: 49 TAPRASTCQALVSYSPPNATTLAAVRALFQLRSHRALLASNALP--LSTPPTAPAPSPVR 106
Query: 91 VPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIG 150
V + C+CS G G + + P Y V+ D LD +AR F L+ Y+ I ANN+S+P+ + +G
Sbjct: 107 VRLPCLCSGGAGATFQRPTYKVRAGDTLDAVARGAFAGLVTYRDIAAANNVSDPNRVAVG 166
Query: 151 QNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
Q L +PLPCSCD V VVH +V GSS A IA+++GT +T++ LN + D L+A
Sbjct: 167 QELWVPLPCSCDPVGGEAVVHLTYVAPAGSSVAGIAEEYGTTEETILALNRMPDAKSLLA 226
Query: 211 GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
G+ LDVPL+AC+S+I + + D LRV N +Y TAN+C+ C C +T W L C+P+Q
Sbjct: 227 GQVLDVPLRACSSAISSTAIDRNLRVPNASYILTANNCIMCGCSST-TWQLDCQPTQGLT 285
Query: 271 SSPNSRWKTCPSMLCGDSESLSIGNTTTS--NNCNRTTCEYAGYNN---LSILTTLNSLS 325
S+ CP+ CGD L +GNT+TS + C TTC YAGY N SIL+ L + S
Sbjct: 286 SN-------CPAAKCGD---LFLGNTSTSATSTCESTTCSYAGYTNGTSFSILSNLTASS 335
Query: 326 TC--------PSPSN-NASRIGS---WNLLLISIFLVLLHFHLIQ 358
C PS+ +ASR+GS W L+ + LL ++
Sbjct: 336 VCNAAGISPAAQPSHSSASRLGSPARWWELIAGFHVALLCLGFLR 380
>gi|357154496|ref|XP_003576802.1| PREDICTED: chitin elicitor-binding protein-like [Brachypodium
distachyon]
Length = 373
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 193/337 (57%), Gaps = 27/337 (8%)
Query: 5 QLKLVLLLFTVCAALS---TLSTAQDFKCSAQT--AARCQALVGYLPPNKT---TISEIQ 56
QL ++ LL AALS + TA F C+A A+ CQAL+ Y PPN T T++ ++
Sbjct: 3 QLTILALLCVSLAALSLSPSPVTAARFACNATAPRASTCQALISYAPPNSTASMTLAGVR 62
Query: 57 SLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDD 116
+LF +++ R++L +NN P TP P I++P C+CS G G + + P Y V+ D
Sbjct: 63 ALFQLRSHRALLASNNLPLSTPPTAPAPTPLRIRLP--CLCSGGAGATFQRPTYRVRAGD 120
Query: 117 GLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVV 176
LD +AR++F L+ Y+ I ANN+S+P + +GQ L IPLPCSCD VD VVHY +VV
Sbjct: 121 TLDAVARSVFAGLVTYRDIAAANNVSDPSKVAVGQELRIPLPCSCDPVDGVPVVHYTYVV 180
Query: 177 EEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRV 236
GSS A IAQ++G ++ LN + D L+AG+ LDVPL+ C+S+I + D L V
Sbjct: 181 PAGSSVAGIAQEYGATEAAILALNRMPDAKSLLAGQVLDVPLRGCSSAISNTAIDRNLIV 240
Query: 237 ANGTYTFTANSCVKCQCDATNNWTLQCKPSQ-FQPSSPNSRWKTCPSMLCGDSESLSIGN 295
N +Y FTAN+C+ C C +T W L C+ + PS CP CGD+ +GN
Sbjct: 241 PNSSYIFTANNCIVCGCSST-TWQLDCQATTGIGPS-------FCPVAKCGDAF---LGN 289
Query: 296 TTTSN--NCNRTTCEYAGYNN---LSILTTLNSLSTC 327
TTS C T C YAGY N +I L + S C
Sbjct: 290 ITTSTAPACETTMCSYAGYTNSTSFAIHANLTTTSVC 326
>gi|357114186|ref|XP_003558881.1| PREDICTED: chitin elicitor-binding protein-like [Brachypodium
distachyon]
Length = 363
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 194/344 (56%), Gaps = 29/344 (8%)
Query: 24 TAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSV 83
+A +F C+AQ + CQ+ +GY+ PN TT E+ + F L +LGANN P TP V
Sbjct: 29 SAANFTCAAQ-GSTCQSAIGYVAPNATTYGELLARFNTSTLADLLGANNLPATTPSTARV 87
Query: 84 PAQKPIKVPIHCICS---NGT---GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVE 137
PA+ +++P C+C+ NG G SD+VPVYTV+ +D +D IAR +F + +Q+I +
Sbjct: 88 PAKATVRIPFRCLCAAAGNGASVVGRSDRVPVYTVQPNDWMDAIARNVFDAFVTFQEIAD 147
Query: 138 ANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLM 197
ANNI PD I +GQ L IPLPCSCD V + V+HYAH V G + + +A KFG TL+
Sbjct: 148 ANNIPKPDQIGVGQKLWIPLPCSCDQVLGSDVLHYAHTVAAGETTSGMAAKFGVLESTLV 207
Query: 198 KLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFD-NYLRVANGTYTFTANSCVKCQCDAT 256
LN I D L+ G+ LDVPL C SSI + S D N LR+ NG Y TA C++C C ++
Sbjct: 208 TLNKIADPKNLLQGQILDVPLPVCASSISSTSADHNLLRLPNGAYALTAQDCIQCSC-SS 266
Query: 257 NNWTLQCKPSQFQPSSPNSRWKTCPSM-LCGDSESLSIGNTTTSNNCNRTTCEY---AGY 312
N + L C +Q K CP++ C + L N T C TTC Y +
Sbjct: 267 NTYQLNCTSTQ---------GKGCPAVPPCNGTLKLGQTNGT---GCGSTTCAYSGYSNS 314
Query: 313 NNLSILTTL--NSLSTCPSPSNNASRIGS--WNLLLISIFLVLL 352
++LSI TTL N + C + + S W ++ IS +VL+
Sbjct: 315 SSLSIQTTLVSNQTTACQNSGSERSEFSGSMWMMVAISFHMVLI 358
>gi|242045486|ref|XP_002460614.1| hypothetical protein SORBIDRAFT_02g031910 [Sorghum bicolor]
gi|241923991|gb|EER97135.1| hypothetical protein SORBIDRAFT_02g031910 [Sorghum bicolor]
Length = 373
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 191/309 (61%), Gaps = 17/309 (5%)
Query: 23 STAQDFKCSAQT--AARCQALVGYLPPNKT---TISEIQSLFTVKNLRSILGANNFPPGT 77
+ A F C+A A+ CQAL+ Y PPN T T++ +++LF +++ R++L AN P T
Sbjct: 28 ARAARFACNATAPRASTCQALISYAPPNGTATPTLAAVRALFQLRSHRALLAANGLPLST 87
Query: 78 PRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVE 137
P PA +++P C+CS G G + + P Y V+ D LD +AR +F L+ YQ I
Sbjct: 88 PPTAPAPAPLRVRLP--CLCSGGAGATFQRPTYRVRAGDTLDAVARGVFAGLVTYQDIAA 145
Query: 138 ANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLM 197
ANN+S+P+ + +GQ L IP+PCSCD V VVH+ +VV G S A IAQ+F T +T++
Sbjct: 146 ANNVSDPNRVAVGQQLWIPVPCSCDPVAGQPVVHFTYVVPTGGSVAGIAQEFSTTEETIL 205
Query: 198 KLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATN 257
+N + D ++AG+ LDVPL+AC S+I + + D L V NG+Y TAN+CV C C +++
Sbjct: 206 AVNKMADSKAIVAGQVLDVPLRACGSAISSTAIDRNLLVPNGSYVLTANNCVMCGC-SSS 264
Query: 258 NWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSI 317
W L C+P+Q SS CP+ CGD + +GNT+++++C TTC YAGY N +
Sbjct: 265 TWQLDCQPTQGLSSS------FCPAAKCGD---MFLGNTSSTSSCESTTCSYAGYTNTTS 315
Query: 318 LTTLNSLST 326
L +++T
Sbjct: 316 FAILANVTT 324
>gi|224035617|gb|ACN36884.1| unknown [Zea mays]
gi|414886638|tpg|DAA62652.1| TPA: hypothetical protein ZEAMMB73_040438 [Zea mays]
Length = 367
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 189/305 (61%), Gaps = 18/305 (5%)
Query: 28 FKCSAQT--AARCQALVGYLPPNKT---TISEIQSLFTVKNLRSILGANNFPPGTPRNFS 82
F C+A A+ CQALV Y PPN T T++ +++LF +++ R++L AN P TP
Sbjct: 31 FACNATAPRASTCQALVSYAPPNGTATPTLAAVRALFQLRSHRALLAANGLPLSTPPTAP 90
Query: 83 VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS 142
P +++P C+CS G G + + P Y V+ D LD +AR +F L+ YQ I ANN+S
Sbjct: 91 APVPLRVRLP--CLCSGGAGATFQRPTYRVRAGDTLDAVARGVFAGLVTYQDIAAANNVS 148
Query: 143 NPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
+P+ + +GQ L IP+PCSCD V VVH+ +VV G S + IA++FGT +T++ LN +
Sbjct: 149 DPNRVAVGQQLWIPVPCSCDLVGGQPVVHFTYVVPAGGSVSSIAEEFGTTEETILTLNKM 208
Query: 203 HDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQ 262
D L+AG+ LDVPL+AC+S+I + + D L V NG+Y TAN+CVKC C +++ W L
Sbjct: 209 PDAKSLLAGQVLDVPLRACSSAISSTAIDRNLLVPNGSYILTANNCVKCGC-SSSTWQLD 267
Query: 263 CKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGN-TTTSNNCNRTTCEYAGYNNLSILTTL 321
C+ +Q SS CP+ CGD + +GN ++++++C T C YAGY N + L
Sbjct: 268 CQSTQGLSSS------FCPAAKCGD---MFLGNTSSSTSSCESTACSYAGYTNSTSFAIL 318
Query: 322 NSLST 326
+++T
Sbjct: 319 ANVTT 323
>gi|108860575|dbj|BAE95828.1| chitin elicitor binding protein [Oryza sativa Japonica Group]
Length = 382
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 181/335 (54%), Gaps = 22/335 (6%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQ 86
+F C+ + C++ + Y PN TT + + F L +LGAN P GT + V A
Sbjct: 56 NFTCAVASGTTCKSAILYTSPNATTYGNLVARFNTTTLPDLLGANGLPDGTLSSAPVAAN 115
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
+K+P C C+ G SD++P+Y V+ DGLD IAR +F + YQ+I ANNI +P+
Sbjct: 116 STVKIPFRCRCNGDVGQSDRLPIYVVQPQDGLDAIARNVFNAFVTYQEIAAANNIPDPNK 175
Query: 147 IQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
I + Q L IPLPCSCD + + V+H A+ V +G + + IA K+G TL+ N I D +
Sbjct: 176 INVSQTLWIPLPCSCDKEEGSNVMHLAYSVGKGENTSAIAAKYGVTESTLLTRNKIDDPT 235
Query: 207 KLIAGEPLDVPLKACNSSIKADSFD-NYLRVANGTYTFTANSCVKCQCDATNNWTLQCKP 265
KL G+ LDVPL C SSI S D N + + +GTY FTA +C++C C +T + L C
Sbjct: 236 KLQMGQILDVPLPVCRSSISDTSADHNLMLLPDGTYGFTAGNCIRCSCSST-TYQLNCTA 294
Query: 266 SQFQPSSPNSRWKTCPSM-LCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLNSL 324
Q K CPS+ LC + L N T C TTC Y+GY+N S L SL
Sbjct: 295 VQN---------KGCPSVPLCNGTLKLGETNGT---GCGSTTCAYSGYSNSSSLIIQTSL 342
Query: 325 ST-----CPSPSNNASRIGS--WNLLLISIFLVLL 352
+T C + S+ W++ +IS +VL+
Sbjct: 343 ATNQTTACQRGGSGRSQFARSMWSMSVISFHMVLI 377
>gi|115450549|ref|NP_001048875.1| Os03g0133400 [Oryza sativa Japonica Group]
gi|75244901|sp|Q8H8C7.1|CEBIP_ORYSJ RecName: Full=Chitin elicitor-binding protein; Short=CEBiP; Flags:
Precursor
gi|22758281|gb|AAN05509.1| Unknown protein [Oryza sativa Japonica Group]
gi|108706038|gb|ABF93833.1| LysM domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113547346|dbj|BAF10789.1| Os03g0133400 [Oryza sativa Japonica Group]
gi|125542274|gb|EAY88413.1| hypothetical protein OsI_09873 [Oryza sativa Indica Group]
gi|125606383|gb|EAZ45419.1| hypothetical protein OsJ_30068 [Oryza sativa Japonica Group]
gi|215706401|dbj|BAG93257.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 356
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 181/335 (54%), Gaps = 22/335 (6%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQ 86
+F C+ + C++ + Y PN TT + + F L +LGAN P GT + V A
Sbjct: 30 NFTCAVASGTTCKSAILYTSPNATTYGNLVARFNTTTLPDLLGANGLPDGTLSSAPVAAN 89
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
+K+P C C+ G SD++P+Y V+ DGLD IAR +F + YQ+I ANNI +P+
Sbjct: 90 STVKIPFRCRCNGDVGQSDRLPIYVVQPQDGLDAIARNVFNAFVTYQEIAAANNIPDPNK 149
Query: 147 IQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
I + Q L IPLPCSCD + + V+H A+ V +G + + IA K+G TL+ N I D +
Sbjct: 150 INVSQTLWIPLPCSCDKEEGSNVMHLAYSVGKGENTSAIAAKYGVTESTLLTRNKIDDPT 209
Query: 207 KLIAGEPLDVPLKACNSSIKADSFD-NYLRVANGTYTFTANSCVKCQCDATNNWTLQCKP 265
KL G+ LDVPL C SSI S D N + + +GTY FTA +C++C C +T + L C
Sbjct: 210 KLQMGQILDVPLPVCRSSISDTSADHNLMLLPDGTYGFTAGNCIRCSCSST-TYQLNCTA 268
Query: 266 SQFQPSSPNSRWKTCPSM-LCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLNSL 324
Q K CPS+ LC + L N T C TTC Y+GY+N S L SL
Sbjct: 269 VQN---------KGCPSVPLCNGTLKLGETNGT---GCGSTTCAYSGYSNSSSLIIQTSL 316
Query: 325 ST-----CPSPSNNASRIGS--WNLLLISIFLVLL 352
+T C + S+ W++ +IS +VL+
Sbjct: 317 ATNQTTACQRGGSGRSQFARSMWSMSVISFHMVLI 351
>gi|414864654|tpg|DAA43211.1| TPA: hypothetical protein ZEAMMB73_202115 [Zea mays]
Length = 356
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLF-TVKNLRSILGANNFPPGTPRNFSVPA 85
+F C A CQ+ +GY PN TT E+ + F L +LGAN P TP + + A
Sbjct: 28 NFTC-ATVGKTCQSAIGYAVPNATTYGELVARFNATTTLAELLGANGLPATTPASTPLAA 86
Query: 86 QKPIKVPIHCIC-SNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
+ ++VP C C SNG G SD P Y V DGLD IAR +FG + YQ+I ANNI+N
Sbjct: 87 KATVRVPFRCRCGSNGVGQSDGGPFYVVYPLDGLDHIAREVFGGFVTYQEIATANNITNV 146
Query: 145 DLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD 204
+LI +GQ L IPLPC+CD VD A V+H+A+ V +G IA +FG TL+ +N I D
Sbjct: 147 NLIVVGQKLRIPLPCTCDQVDGADVMHFAYSVAKGDDPPGIAARFGVTETTLLSVNKITD 206
Query: 205 -DSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQC 263
+ L G+ LDVPL C SS+ S D L V NGTY TA+ C++C C A+N L C
Sbjct: 207 PKTSLQQGQILDVPLPVCKSSVGNASADYNLLVPNGTYVLTADDCIQCSCSASNYEHLDC 266
Query: 264 KPSQFQPSSPNSRWKTCPSM-LCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLN 322
P + CP++ C S L++G C C Y+GY N + LT
Sbjct: 267 TP---------VKGGRCPAVPPC--SGGLTLGQ-VNGTGCASRMCAYSGYTNTTSLTIHT 314
Query: 323 SL 324
SL
Sbjct: 315 SL 316
>gi|293336244|ref|NP_001170126.1| uncharacterized protein LOC100384051 precursor [Zea mays]
gi|224033715|gb|ACN35933.1| unknown [Zea mays]
Length = 356
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLF-TVKNLRSILGANNFPPGTPRNFSVPA 85
+F C A CQ+ +GY PN TT E+ + F L +LGAN P TP + + A
Sbjct: 28 NFTC-ATVGKTCQSAIGYAVPNATTYGELVARFNATTTLAELLGANGLPATTPASTPLAA 86
Query: 86 QKPIKVPIHCIC-SNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
+ ++VP C C SNG G SD P Y V DGLD IAR +FG + YQ+I ANNI+N
Sbjct: 87 KATVRVPFRCRCGSNGVGQSDGGPFYVVYPLDGLDHIAREVFGGFVTYQEIATANNITNV 146
Query: 145 DLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD 204
+LI +GQ L IPLPC+CD VD A V+H+A+ V +G IA +FG TL+ +N I D
Sbjct: 147 NLIVVGQKLRIPLPCTCDQVDGADVMHFAYSVAKGDDPPGIAARFGVTETTLLSVNKITD 206
Query: 205 -DSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQC 263
+ L G+ LDVPL C SS+ S D L V NGTY TA+ C++C C A+N L C
Sbjct: 207 PKTSLQQGQILDVPLPVCKSSVGNASADYNLLVPNGTYVLTADDCIQCSCSASNYEHLDC 266
Query: 264 KPSQFQPSSPNSRWKTCPSM-LCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLN 322
P + CP++ C S L++G C C Y+GY N + LT
Sbjct: 267 TP---------VKGGRCPAVPPC--SGGLTLGQ-VNGTGCASRMCAYSGYTNTTSLTIHT 314
Query: 323 SL 324
SL
Sbjct: 315 SL 316
>gi|326511874|dbj|BAJ92081.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528489|dbj|BAJ93426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 177/325 (54%), Gaps = 23/325 (7%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCIC 97
C + +GY PN TT + + F L +LGAN P T V A + +P C+C
Sbjct: 38 CNSAIGYRVPNATTYGALLARFNTTTLAGLLGANRLPLATSPKRRVAAMATVVIPFTCLC 97
Query: 98 S-NGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
+ NG G SD PVYTV+ DGL IAR F ++ YQ+I AN I++ +LI +GQ L IP
Sbjct: 98 AGNGVGQSDHAPVYTVQPQDGLYAIARDSFDAVVTYQEIATANKIADVNLINVGQKLWIP 157
Query: 157 LPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
LPCSCD V A V H AH+V G + + IA FG DTL+KLN I D L + LDV
Sbjct: 158 LPCSCDPVGGADVFHLAHIVNGGETTSGIAATFGVTEDTLLKLNNIADPKSLKKDQVLDV 217
Query: 217 PLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSR 276
PL C+SSI +S D+ LR+ NGTY TA C++C C ++N + L C Q
Sbjct: 218 PLPVCSSSISNNSADHNLRLPNGTYALTAQDCIQCSC-SSNTFQLDCT---LQGK----- 268
Query: 277 WKTCPSM-LCGDSESLSIGNTTTSNNCNRTTCEYAGYNN---LSILTTLNSLSTCPSPSN 332
K CP++ C + L +G+T+ + C+ T C Y+GY+N SI TTL T P+
Sbjct: 269 -KGCPAVPPC--NGGLKLGDTSGA-GCDSTMCAYSGYSNGSSFSIQTTLFKNQTAPACEK 324
Query: 333 NASR----IGS-WNLLLISIFLVLL 352
S GS W + IS +VL+
Sbjct: 325 GGSSRSVFAGSVWRISAISFHMVLI 349
>gi|242086677|ref|XP_002439171.1| hypothetical protein SORBIDRAFT_09g001743 [Sorghum bicolor]
gi|241944456|gb|EES17601.1| hypothetical protein SORBIDRAFT_09g001743 [Sorghum bicolor]
Length = 357
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 158/298 (53%), Gaps = 31/298 (10%)
Query: 38 CQALVGYLPPNKTTISEIQSLF-TVKNLRSILGANNFPPGTPRNFS---VPAQKPIKVPI 93
C A + Y PN TT SE+ F T + +LGAN PP S + A+ ++VP
Sbjct: 43 CNAAIAYAVPNATTYSELVVRFNTTSTIADLLGANGLPPTYDYEDSSTPITAETVVRVPF 102
Query: 94 HCICS-NGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQN 152
C C NG G S P+Y V+ DGLD IAR +F + YQ+I ANNIS+ +LIQIGQ
Sbjct: 103 RCRCGRNGVGESVGGPIYVVQPMDGLDHIARDVFDAFVTYQEIATANNISDVNLIQIGQK 162
Query: 153 LTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGE 212
L IPLPCSCD VD A V+H A+ V EG IA KFG +TL+ +N I D L G+
Sbjct: 163 LRIPLPCSCDQVDGADVMHLAYSVAEGEDSPGIAAKFGVAENTLLSVNKITDPKSLQQGQ 222
Query: 213 PLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNW----TLQCKPSQF 268
LDVPL CNSSI S D+ L + GTY TA CV+C C + W L C P Q
Sbjct: 223 ILDVPLPVCNSSIDHLSADHNLLLPYGTYAVTAQGCVQCSC-MIDQWNKDQQLDCVPVQD 281
Query: 269 QPSSPNSRWKTCPSM-LCGDSESLSIGNTTTSNNCNRTTCEYAGY----NNLSILTTL 321
+ CP++ +C + +L +G C C Y GY +L+I TTL
Sbjct: 282 E---------KCPAVPVC--TGALKLGQA-----CGSKMCAYEGYVSDSTSLTIYTTL 323
>gi|242042335|ref|XP_002468562.1| hypothetical protein SORBIDRAFT_01g048100 [Sorghum bicolor]
gi|241922416|gb|EER95560.1| hypothetical protein SORBIDRAFT_01g048100 [Sorghum bicolor]
Length = 231
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 121/204 (59%), Gaps = 3/204 (1%)
Query: 24 TAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLF-TVKNLRSILGANNFPPGTPRNFS 82
+A +F C A CQ+ +GY PN TT E+ + F T L +LGAN TP +
Sbjct: 26 SATNFTC-ATVGKMCQSAMGYAVPNATTYGELATRFNTTTTLAGLLGANGLLATTPASTP 84
Query: 83 VPAQKPIKVPIHCIC-SNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+ A+ ++VP C C SNG G SD P+Y V DGLD IAR +F + YQ+I ANNI
Sbjct: 85 LAAKTTVRVPFRCRCGSNGVGQSDGGPIYVVYPLDGLDHIARDVFDAFVTYQEIATANNI 144
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
S+ +LI++GQ L IPLPC+CD VD A V+H+A+ V +G IA KFG TL+ LN
Sbjct: 145 SDVNLIEVGQKLRIPLPCTCDQVDGADVMHFAYSVAKGDDPPGIAAKFGVTESTLLSLNK 204
Query: 202 IHDDSKLIAGEPLDVPLKACNSSI 225
I D L G+ LDVPL C SSI
Sbjct: 205 ITDPKSLQQGQILDVPLPVCQSSI 228
>gi|358348518|ref|XP_003638292.1| LysM domain-containing GPI-anchored protein [Medicago truncatula]
gi|355504227|gb|AES85430.1| LysM domain-containing GPI-anchored protein [Medicago truncatula]
Length = 227
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 125/210 (59%), Gaps = 1/210 (0%)
Query: 9 VLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSIL 68
V+L+ +V ++ +FKC + A C++L Y N TT+ EI +LF VK+ +L
Sbjct: 17 VVLVASVGITVTEAQPEANFKCLTENAT-CRSLTDYTSTNSTTLKEIATLFGVKHFLDLL 75
Query: 69 GANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQ 128
GANN P T ++ V + IKVP C CSN TG S+ VP Y + D LD IAR F
Sbjct: 76 GANNLPSNTNNSYKVNPNQVIKVPFPCKCSNRTGTSNHVPRYKIVPGDTLDAIARVRFAG 135
Query: 129 LLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQK 188
L+KYQ+I AN I + + I G + IPLPCSCD VD V+HYAH+V GSS IAQ+
Sbjct: 136 LVKYQQIQTANKIPDANNITAGATIWIPLPCSCDPVDGTSVMHYAHIVPMGSSIQSIAQQ 195
Query: 189 FGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ + TL+ LN + D L+AG+ LDVPL
Sbjct: 196 YAISQQTLLSLNDLDDPKNLLAGQLLDVPL 225
>gi|326499930|dbj|BAJ90800.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 249
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 144/257 (56%), Gaps = 22/257 (8%)
Query: 105 DKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV 164
D PVYTV+ DGL IAR F ++ YQ+I AN I++ +LI +GQ L IPLPCSCD V
Sbjct: 1 DHAPVYTVQPQDGLYAIARDSFDAVVTYQEIATANKIADVNLINVGQKLWIPLPCSCDPV 60
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSS 224
A V H AH+V G + + IA FG DTL+KLN I D L + LDVPL C+SS
Sbjct: 61 GGADVFHLAHIVNGGETTSGIAATFGVTEDTLLKLNNIADPKSLKKDQVLDVPLPVCSSS 120
Query: 225 IKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSM- 283
I +S D+ LR+ NGTY TA C++C C ++N + L C Q K CP++
Sbjct: 121 ISNNSADHNLRLPNGTYALTAQDCIQCSC-SSNTFQLDCT---LQGK------KGCPAVP 170
Query: 284 LCGDSESLSIGNTTTSNNCNRTTCEYAGYNN---LSILTTLNSLSTCPSPSNNASR---- 336
C + L +G+T+ + C+ T C Y+GY+N SI TTL T P+ S
Sbjct: 171 PC--NGGLKLGDTSGA-GCDSTMCAYSGYSNGSSFSIQTTLFKNQTAPACEKGGSSRSVF 227
Query: 337 IGS-WNLLLISIFLVLL 352
GS W + IS +VL+
Sbjct: 228 AGSVWRISAISFHMVLI 244
>gi|125577461|gb|EAZ18683.1| hypothetical protein OsJ_34204 [Oryza sativa Japonica Group]
Length = 251
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 125/217 (57%), Gaps = 4/217 (1%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPP-GTPRNFSVPA 85
+F C+ AA CQ+ +GY N TT +E+ SLF L +L AN PP P + ++PA
Sbjct: 33 NFTCTTVQAA-CQSAIGYTTRNATTYAELLSLFNTSTLAELLRANGLPPTAMPPDTAIPA 91
Query: 86 QKPIKVPIHCICSNGT--GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISN 143
+ VP C+C+ T G SD P+Y V DGLD IAR +F + YQ+I +A+NI +
Sbjct: 92 AATVTVPFRCLCNVATRVGRSDYRPIYLVGSQDGLDAIARKVFDGFVTYQEIADASNIPD 151
Query: 144 PDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIH 203
P+ I +GQ L IPLPCSCD VD V H+A+ V + + IA KFG TLM++NGI
Sbjct: 152 PNKIFVGQELWIPLPCSCDQVDGHNVTHFAYKVRAVDTTSAIAAKFGVLESTLMRINGIT 211
Query: 204 DDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGT 240
D L+ G+ LDVP+ N S+ S + AN +
Sbjct: 212 DPKNLVQGQILDVPIPGMNFSLYFFSITRKMLPANAS 248
>gi|108864483|gb|ABA94163.2| Protein kinase domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 596
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 117/195 (60%), Gaps = 4/195 (2%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPP-GTPRNFSVPA 85
+F C+ AA CQ+ +GY N TT +E+ SLF L +L AN PP P + ++PA
Sbjct: 33 NFTCTTVQAA-CQSAIGYTTRNATTYAELLSLFNTSTLAELLRANGLPPTAMPPDTAIPA 91
Query: 86 QKPIKVPIHCICSNGT--GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISN 143
+ VP C+C+ T G SD P+Y V DGLD IAR +F + YQ+I +A+NI +
Sbjct: 92 AATVTVPFRCLCNVATRVGRSDYRPIYLVGSQDGLDAIARKVFDGFVTYQEIADASNIPD 151
Query: 144 PDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIH 203
P+ I +GQ L IPLPCSCD VD V H+A+ V + + IA KFG TLM++NGI
Sbjct: 152 PNKIFVGQELWIPLPCSCDQVDGHNVTHFAYKVRAVDTTSAIAAKFGVLESTLMRINGIT 211
Query: 204 DDSKLIAGEPLDVPL 218
D L+ G+ LDVP+
Sbjct: 212 DPKNLVQGQILDVPI 226
>gi|218185905|gb|EEC68332.1| hypothetical protein OsI_36434 [Oryza sativa Indica Group]
Length = 596
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPP-GTPRNFSVPA 85
+F C+ AA CQ+ +GY N TT +E+ SLF L +L AN PP P + ++PA
Sbjct: 33 NFTCTTVQAA-CQSAIGYTTRNATTYAELLSLFNTSTLAELLRANGLPPTAMPPDTAIPA 91
Query: 86 QKPIKVPIHCICSNGT--GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISN 143
+ VP +C+ T G SD P+Y V DGLD IAR +F + YQ+I +A+NI +
Sbjct: 92 AATVTVPFRSLCNVATRVGRSDYRPIYLVGSQDGLDAIARKVFDGFVTYQEIADASNIPD 151
Query: 144 PDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIH 203
P+ I +GQ L IPLPCSCD VD V H+A+ V + + IA KFG TLM++NGI
Sbjct: 152 PNKIFVGQELWIPLPCSCDQVDGHNVTHFAYKVRAVDTTSAIAAKFGVLESTLMRINGIT 211
Query: 204 DDSKLIAGEPLDVPL 218
D L+ G+ LDVP+
Sbjct: 212 DPKNLVQGQILDVPI 226
>gi|222616123|gb|EEE52255.1| hypothetical protein OsJ_34203 [Oryza sativa Japonica Group]
Length = 248
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 116/208 (55%), Gaps = 3/208 (1%)
Query: 23 STAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFS 82
++A +F C+ T CQ+ + Y PP TT E+ S F LR + AN PP TP + +
Sbjct: 23 ASATNFTCTWPTT--CQSAIVYTPPAATTYIELLSSFETTTLRDLFDANGLPPSTPSHTA 80
Query: 83 VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS 142
+P + VP C C G + P + ++ +D + +IA F + YQ+I A+NIS
Sbjct: 81 IPTNATVIVPFRCSCVAGANRPESQPFHIIQINDNMSYIAAQ-FDDFVTYQEIAAASNIS 139
Query: 143 NPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
NPD +++GQ L IPLPCSCD V+ V H+A+ V + + IA +FG TL+K+NGI
Sbjct: 140 NPDFLEVGQELWIPLPCSCDQVEGNNVTHFAYKVRAADNVSKIAARFGVKESTLLKINGI 199
Query: 203 HDDSKLIAGEPLDVPLKACNSSIKADSF 230
D L G+ LDVP+ N + +S+
Sbjct: 200 TDPKNLTQGQILDVPVPGTNDRVFYNSY 227
>gi|449458099|ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
[Cucumis sativus]
gi|449528597|ref|XP_004171290.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
[Cucumis sativus]
Length = 432
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 163/304 (53%), Gaps = 26/304 (8%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ SLF V + SIL AN P N +P+Q IK+PI C
Sbjct: 46 CNALLGYTLYTDLKVSEVGSLFQVDPI-SILTANAIDVSYPDVENHILPSQLFIKIPISC 104
Query: 96 ICSNGT--GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL 153
C +G VS + Y + D L IA +I+ L+ +I EAN+IS+P L+ +GQ L
Sbjct: 105 SCVDGIRKSVSTR---YKTRPSDTLSSIADSIYAGLVSSDQIREANSISDPSLLDVGQTL 161
Query: 154 TIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAG 211
+PLPC+C + DN+ ++ ++VV+ + IA ++ T LM +N + + + + AG
Sbjct: 162 VVPLPCTCFNGTDNSLPAIYLSYVVQPEDTLTGIAFRYSTTITDLMDVNAMGNPA-IKAG 220
Query: 212 EPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPS 271
+ L VPL AC S + + D L V NG+Y TA+ CV+C C N + C P+ F
Sbjct: 221 DILAVPLPACASKFPSYASDFGLIVPNGSYAITASHCVQCSC-GPGNLNMYCMPAPFA-- 277
Query: 272 SPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS--LST 326
+C SM C +S L +GN T +S CN T+C Y G+ N +ILT L+S
Sbjct: 278 ------VSCSSMQCKNSN-LMLGNVTAQQSSAGCNVTSCSYGGFVNGTILTMLSSNLQPR 330
Query: 327 CPSP 330
CP P
Sbjct: 331 CPGP 334
>gi|218185904|gb|EEC68331.1| hypothetical protein OsI_36433 [Oryza sativa Indica Group]
Length = 457
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 123/231 (53%), Gaps = 6/231 (2%)
Query: 23 STAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFS 82
++A +F C+ A CQ+ + Y PP TT E+ S F LR + AN PP TP + +
Sbjct: 23 ASATNFTCTG--PATCQSAIVYTPPAATTYIELLSSFETTTLRDLFDANGLPPSTPSHTA 80
Query: 83 VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS 142
+PA + VP C C G + P + ++ +D + +IA F + YQ+I A+NIS
Sbjct: 81 IPANATVIVPFRCSCVAGANRPESQPFHIIQPNDNMSYIAAQ-FDDFVTYQEIAAASNIS 139
Query: 143 NPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
NPD +++GQ L IPLPCSCD V+ V H+A+ V + + IA +FG TL+K+NGI
Sbjct: 140 NPDFLEVGQELWIPLPCSCDQVEGNNVTHFAYKVRAADNVSKIAARFGVKESTLLKINGI 199
Query: 203 HDDSKLIAGEPLDVPLKACNSSIK---ADSFDNYLRVANGTYTFTANSCVK 250
D L G+ LDVP+ + S + F + +A G S +K
Sbjct: 200 TDPKNLTQGQILDVPVPDRDKSKELGWEKRFKIIIEIARGLEYLHEESRLK 250
>gi|414864655|tpg|DAA43212.1| TPA: hypothetical protein ZEAMMB73_202115 [Zea mays]
Length = 243
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 113/193 (58%), Gaps = 4/193 (2%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLF-TVKNLRSILGANNFPPGTPRNFSVPA 85
+F C A CQ+ +GY PN TT E+ + F L +LGAN P TP + + A
Sbjct: 28 NFTC-ATVGKTCQSAIGYAVPNATTYGELVARFNATTTLAELLGANGLPATTPASTPLAA 86
Query: 86 QKPIKVPIHCIC-SNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
+ ++VP C C SNG G SD P Y V DGLD IAR +FG + YQ+I ANNI+N
Sbjct: 87 KATVRVPFRCRCGSNGVGQSDGGPFYVVYPLDGLDHIAREVFGGFVTYQEIATANNITNV 146
Query: 145 DLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD 204
+LI +GQ L IPLPC+CD VD A V+H+A+ V +G IA +FG TL+ +N I D
Sbjct: 147 NLIVVGQKLRIPLPCTCDQVDGADVMHFAYSVAKGDDPPGIAARFGVTETTLLSVNKITD 206
Query: 205 -DSKLIAGEPLDV 216
+ L G+ LDV
Sbjct: 207 PKTSLQQGQILDV 219
>gi|188509929|gb|ACD56618.1| peptidoglycan-binding LysM domain-containing related protein
[Gossypioides kirkii]
Length = 453
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 179/339 (52%), Gaps = 30/339 (8%)
Query: 3 NFQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVK 62
++ + L ++F+ A +++ ST + CS + C AL+GY ++E+ SLF V
Sbjct: 10 SYYVALCFMIFSNVALVTSKSTIE--PCS--NSDSCNALLGYTLYTDLKVAEVASLFQVD 65
Query: 63 NLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGT--GVSDKVPVYTVKKDDGL 118
+ SIL AN P N +P++ +K+PI C C +G VS K Y + D L
Sbjct: 66 PI-SILTANAIDISYPDVENHILPSKLFLKIPILCSCVDGIRKSVSTK---YKTRPQDTL 121
Query: 119 DFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVV 176
IA +I+ L+ +I EAN+IS+P ++ +G+NL +PLPC+C + DN ++ ++VV
Sbjct: 122 SSIADSIYAGLVSADQIREANSISDPSVLDVGENLVVPLPCTCFNGTDNGLPAIYLSYVV 181
Query: 177 EEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRV 236
+ + A IA + T LM +N + S + AG+ L VPL AC S+ + D L V
Sbjct: 182 KAVDTLAGIAASYSTTITDLMNVNAMGSTS-IKAGDILAVPLSACASNFPRYASDYGLIV 240
Query: 237 ANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNT 296
NG+Y TA+ CV+C C + L C PS S C SM C S +L +GN
Sbjct: 241 PNGSYAITASHCVQCSC-GLGSRNLYCMPSSLAVS--------CSSMQC-KSSNLKLGNV 290
Query: 297 T---TSNNCNRTTCEYAGYNNLSILTTLNS--LSTCPSP 330
T ++ CN T+C Y GY N +I+T L+S CP P
Sbjct: 291 TVQQSTAGCNVTSCAYGGYANGTIITWLSSSLQPRCPGP 329
>gi|77551319|gb|ABA94116.1| LysM domain containing protein [Oryza sativa Japonica Group]
Length = 226
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 23 STAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFS 82
++A +F C+ T CQ+ + Y PP TT E+ S F LR + AN PP TP + +
Sbjct: 23 ASATNFTCTWPTT--CQSAIVYTPPAATTYIELLSSFETTTLRDLFDANGLPPSTPSHTA 80
Query: 83 VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS 142
+P + VP C C G + P + ++ +D + +IA F + YQ+I A+NIS
Sbjct: 81 IPTNATVIVPFRCSCVAGANRPESQPFHIIQINDNMSYIAAQ-FDDFVTYQEIAAASNIS 139
Query: 143 NPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
NPD +++GQ L IPLPCSCD V+ V H+A+ V + + IA +FG TL+K+NGI
Sbjct: 140 NPDFLEVGQELWIPLPCSCDQVEGNNVTHFAYKVRAADNVSKIAARFGVKESTLLKINGI 199
Query: 203 HDDSKLIAGEPLDVPL 218
D L G+ LDVP+
Sbjct: 200 TDPKNLTQGQILDVPV 215
>gi|302770344|ref|XP_002968591.1| hypothetical protein SELMODRAFT_89593 [Selaginella moellendorffii]
gi|300164235|gb|EFJ30845.1| hypothetical protein SELMODRAFT_89593 [Selaginella moellendorffii]
Length = 369
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 39/326 (11%)
Query: 7 KLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRS 66
+ VLLL A++ ++ A+ F S +A++C +LV Y P ++ I +LF + + S
Sbjct: 9 RTVLLL----ASMLAIAAAKSFIQSCNSASQCSSLVAYRTPAAQSLGAIAALFNIDTV-S 63
Query: 67 ILGANNFP------PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF 120
+L ANN PG+P+ P ++ +KVPI C C +G + +Y + D L
Sbjct: 64 LLAANNLDLRSSLDPGSPQLVIAP-RRIVKVPISCSCVDGIWRGNAT-LYKSRPGDTLAS 121
Query: 121 IARTIFGQLLKYQKIVEANNISN--PDLIQIGQNLTIPLPCSCDD--VDNAKVVHYAHVV 176
IA +FG+L+ ++I +AN I+ + G L IP C C D + ++VV
Sbjct: 122 IADALFGKLVTAKQIAQANGIAANFGGAVAAGSTLVIPFSCGCGDSLAGGGTALLMSYVV 181
Query: 177 EEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRV 236
+ G + +A+++G+ M LNG+ + S+L AG+ + VP++AC SS + ++D L V
Sbjct: 182 QGGDTVGELAREYGSLPGDFMALNGVANASELAAGDVVAVPIRACGSSFRRSAYDFGLVV 241
Query: 237 ANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNT 296
ANG+Y TA CV+C C PN + +CP M C +L++G
Sbjct: 242 ANGSYIITAGHCVQCSC------------------LPNLQHGSCPDMRC-LGTNLTVGAM 282
Query: 297 TTS---NNCNRTTCEYAGYNNLSILT 319
T+ CN T+C Y G+ IL+
Sbjct: 283 ATAASVQGCNVTSCLYTGFKKKIILS 308
>gi|302788244|ref|XP_002975891.1| hypothetical protein SELMODRAFT_34145 [Selaginella moellendorffii]
gi|300156167|gb|EFJ22796.1| hypothetical protein SELMODRAFT_34145 [Selaginella moellendorffii]
Length = 301
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 163/316 (51%), Gaps = 28/316 (8%)
Query: 9 VLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSIL 68
VLLL A++ ++ A+ F S +A++C +LV Y P ++ I +LF + + S+L
Sbjct: 1 VLLL----ASMLAIAAAKSFIQSCNSASQCSSLVAYRTPAAQSLGAIAALFNIDTV-SLL 55
Query: 69 GANNFP------PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
ANN PG+P+ P ++ +KVPI C C +G + +Y + D L IA
Sbjct: 56 AANNLDLRSSLDPGSPQLVIAP-RRIVKVPISCSCVDGIWRGNAT-LYKSRPGDTLASIA 113
Query: 123 RTIFGQLLKYQKIVEANNISN--PDLIQIGQNLTIPLPCSCDD--VDNAKVVHYAHVVEE 178
+FG+L+ ++I +AN I+ + G L IP C C D + ++VV+
Sbjct: 114 DALFGKLVTAKQIAQANGIAANFGGAVAAGSTLVIPFSCGCGDPLAGGGTALLMSYVVQG 173
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVAN 238
G + +A+++G+ M LNG+ + S+L AG+ + VP++AC SS + ++D L VAN
Sbjct: 174 GDTVGELAREYGSLPGDFMALNGVANASELAAGDVVAVPIRACGSSFRRSAYDFGLVVAN 233
Query: 239 GTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTT 298
G+Y TA CV+C C N + C P +P +CP M C +L++G T
Sbjct: 234 GSYIITAGHCVQCSC-LPNLQQVYCTP------APGVISGSCPDMRC-LGTNLTVGAMAT 285
Query: 299 S---NNCNRTTCEYAG 311
+ CN T+C Y G
Sbjct: 286 AASVQGCNVTSCLYTG 301
>gi|339777223|gb|AEK05508.1| peptidoglycan-binding LysM domain-containing protein [Dimocarpus
longan]
Length = 326
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 158/302 (52%), Gaps = 22/302 (7%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ SLF V + SIL AN P N +P+Q +K+PI C
Sbjct: 32 CNALLGYTLYTDLKVSEVSSLFNVDPV-SILTANAIDISYPDVENHILPSQLFLKIPISC 90
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S Y + D L IA I+ L+ ++ EAN I +PD++ +G +L +
Sbjct: 91 ACVDGIRKSVSTH-YKTRPSDTLTSIAAQIYSGLVSADQLREANAIQDPDVLDVGASLIV 149
Query: 156 PLPCSC-DDVDN-AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
PLPC+C + DN V+ ++VV++ + A IA + T LM +N + + + AG+
Sbjct: 150 PLPCTCFNGTDNLLPAVYLSYVVKDIDTLAGIAATYRTTLTDLMTVNAMGSPA-IKAGDI 208
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSP 273
L VPL AC S+ + D L V NG+Y TA+ CV+C C N L C P+ S
Sbjct: 209 LAVPLPACASNFPRYASDRGLIVPNGSYAITASHCVQCSC-GPGNLNLYCMPASLAVS-- 265
Query: 274 NSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS--LSTCP 328
C SM C +S L +GN T +S CN TTC Y G+ N +I+T+L++ CP
Sbjct: 266 ------CSSMQCKNSN-LMLGNVTVQQSSAGCNVTTCSYGGFVNGTIITSLSTSLQPRCP 318
Query: 329 SP 330
P
Sbjct: 319 GP 320
>gi|18395044|ref|NP_564153.1| LysM domain-containing GPI-anchored protein 1 [Arabidopsis
thaliana]
gi|38258218|sp|Q93ZH0.1|LYM1_ARATH RecName: Full=LysM domain-containing GPI-anchored protein 1; Flags:
Precursor
gi|15982870|gb|AAL09782.1| At1g21880/T26F17_5 [Arabidopsis thaliana]
gi|53749174|gb|AAU90072.1| At1g21880 [Arabidopsis thaliana]
gi|332192047|gb|AEE30168.1| LysM domain-containing GPI-anchored protein 1 [Arabidopsis
thaliana]
Length = 416
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 176/336 (52%), Gaps = 22/336 (6%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSI 67
L+ + + ++L+ +TA+ + C AL+GY +SE+ SLF V + SI
Sbjct: 10 LIFVSLILASSLTFTATAKSTIEPCSSNDTCNALLGYTLYTDLKVSEVASLFQVDPI-SI 68
Query: 68 LGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTI 125
L AN P N +P++ +K+PI C C +G S Y + D L IA ++
Sbjct: 69 LLANAIDISYPDVENHILPSKLFLKIPITCSCVDGIRKSVST-HYKTRPSDNLGSIADSV 127
Query: 126 FGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFA 183
+G L+ ++I EAN++++P L+ +G +L IPLPC+C + DN+ V+ ++VV+E +
Sbjct: 128 YGGLVSAEQIQEANSVNDPSLLDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLV 187
Query: 184 LIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTF 243
IA+++ T LM +N + + +G+ L VPL AC S + D L V NG+Y
Sbjct: 188 GIARRYSTTITDLMNVNAM-GAPDVSSGDILAVPLSACASKFPRYASDFGLIVPNGSYAL 246
Query: 244 TANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSN 300
A CV+C C A + L C+P+ S +C SM C +S L +GN T TS
Sbjct: 247 AAGHCVQCSC-ALGSRNLYCEPA--------SLAVSCSSMQCRNSN-LMLGNITVQQTSA 296
Query: 301 NCNRTTCEYAGYNNLSILTTL-NSLS-TCPSPSNNA 334
CN TTC+Y G N +ILT L SL CP P A
Sbjct: 297 GCNVTTCDYNGIANGTILTMLTRSLQPRCPGPQQFA 332
>gi|224084870|ref|XP_002307431.1| predicted protein [Populus trichocarpa]
gi|222856880|gb|EEE94427.1| predicted protein [Populus trichocarpa]
Length = 306
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 166/320 (51%), Gaps = 24/320 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLR 65
+ +L+ V A ++ ST + CS + C AL+ Y +SE+ SLF + +
Sbjct: 4 ITFILIFVNVVALVTPKSTIE--PCS--NSDSCNALLAYTLYTDLKVSEVASLFQIDPV- 58
Query: 66 SILGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
++L AN P N +P+Q +K+PI C C +G S Y + D L IA
Sbjct: 59 ALLTANAIDISYPDVENHILPSQLFLKIPITCSCVDGIRKSVSTH-YKTRPSDTLSTIAD 117
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSS 181
+I+ L+ +I EAN+I +P ++ +GQ+L +PLPC+C + DN+ ++ ++VV+E +
Sbjct: 118 SIYAGLVSADQIKEANSIDDPSVLDVGQSLVVPLPCTCFNGTDNSLPAIYLSYVVKEVDT 177
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTY 241
A IA ++ T LM +N + ++AG+ L VPL AC S +FD L V NG+Y
Sbjct: 178 LAAIAARYATTLTDLMNVNAM-GSVAIMAGDILAVPLPACASKFPRYAFDFGLIVPNGSY 236
Query: 242 TFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---T 298
+A+ CV+C C N L C P+ S C SM C +S L +GN T +
Sbjct: 237 AISASHCVQCSC-GPGNLNLYCMPASLAVS--------CSSMQCRNSN-LMLGNVTWQQS 286
Query: 299 SNNCNRTTCEYAGYNNLSIL 318
S C T+C Y GY N +I+
Sbjct: 287 SAGCKVTSCSYGGYVNGTII 306
>gi|357461525|ref|XP_003601044.1| LysM domain-containing GPI-anchored protein [Medicago truncatula]
gi|355490092|gb|AES71295.1| LysM domain-containing GPI-anchored protein [Medicago truncatula]
Length = 412
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 159/295 (53%), Gaps = 20/295 (6%)
Query: 34 TAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKV 91
T+ C +L+GY +SE+ SLF + + S+L AN+ P + +P++ +K+
Sbjct: 30 TSDTCNSLLGYTLYTDLKVSELSSLFQIDPI-SLLTANSIDISYPDVEHHILPSKLYLKI 88
Query: 92 PIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQ 151
PI C C +G S Y ++ D L IA +I+G L+ ++ EAN++++P+++ +GQ
Sbjct: 89 PIQCSCIDGIRKSVST-NYKIRPSDTLSSIADSIYGGLVSSDQLREANSVTDPNVLDVGQ 147
Query: 152 NLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI 209
NL +PLPC+C + DN ++ ++VV+ S IA ++ T LM +N + + +
Sbjct: 148 NLVVPLPCTCFNGSDNGLPAIYMSYVVQPLDSLNNIAARYFTTLTDLMNVNAM-GTTGIS 206
Query: 210 AGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQ 269
AG+ L +P+ AC S DS D L V NG+Y TA CV+C C N L C P+
Sbjct: 207 AGDILAIPIPACASKFPKDSADFGLLVPNGSYAITAGHCVQCSC-GPRNLNLYCMPA--- 262
Query: 270 PSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTL 321
S +C SM C S +L +GN T TS CN T+C Y G N +I TTL
Sbjct: 263 -----SLAVSCSSMQC-KSSNLMLGNVTVQQTSGGCNVTSCTYDGIVNGTIATTL 311
>gi|224063104|ref|XP_002300994.1| predicted protein [Populus trichocarpa]
gi|222842720|gb|EEE80267.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 157/293 (53%), Gaps = 20/293 (6%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C AL+ Y +SE+ SLF + + ++L N P N +P+Q +K+PI C
Sbjct: 35 CNALLAYTLYTDLKVSEVASLFQIDPI-ALLTTNAIDISYPDVENHILPSQLFLKIPITC 93
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S Y + D L IA +I+ L+ +I EAN+I +P ++ +GQ+L +
Sbjct: 94 SCVDGIRKSVST-HYKTRPSDTLSSIADSIYAGLVSADQIKEANSIDDPSVLDVGQSLVV 152
Query: 156 PLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
PLPC+C + DN+ ++ ++VV+E + A IA ++ T LM +N + + + AG+
Sbjct: 153 PLPCTCFNGTDNSLPAIYLSYVVKEVDTLAAIAARYETTLTDLMNVNAM-GSAAIKAGDI 211
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSP 273
L VPL AC S + D L V NG+Y +A+ CV+C C N L C P+
Sbjct: 212 LAVPLPACASKFPRYASDFGLIVPNGSYAISASHCVQCSC-GPGNLNLYCMPA------- 263
Query: 274 NSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS 323
S +C SM C +S L +GN T +S CN T+C Y GY N +I+TTL++
Sbjct: 264 -SLAVSCSSMQCRNSN-LMLGNVTVQQSSAGCNVTSCNYGGYVNGTIMTTLST 314
>gi|30687570|ref|NP_849697.1| LysM domain-containing GPI-anchored protein 1 [Arabidopsis
thaliana]
gi|6552732|gb|AAF16531.1|AC013482_5 T26F17.10 [Arabidopsis thaliana]
gi|332192046|gb|AEE30167.1| LysM domain-containing GPI-anchored protein 1 [Arabidopsis
thaliana]
Length = 316
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 168/319 (52%), Gaps = 20/319 (6%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSI 67
L+ + + ++L+ +TA+ + C AL+GY +SE+ SLF V + SI
Sbjct: 10 LIFVSLILASSLTFTATAKSTIEPCSSNDTCNALLGYTLYTDLKVSEVASLFQVDPI-SI 68
Query: 68 LGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTI 125
L AN P N +P++ +K+PI C C +G S Y + D L IA ++
Sbjct: 69 LLANAIDISYPDVENHILPSKLFLKIPITCSCVDGIRKSVSTH-YKTRPSDNLGSIADSV 127
Query: 126 FGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFA 183
+G L+ ++I EAN++++P L+ +G +L IPLPC+C + DN+ V+ ++VV+E +
Sbjct: 128 YGGLVSAEQIQEANSVNDPSLLDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLV 187
Query: 184 LIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTF 243
IA+++ T LM +N + + +G+ L VPL AC S + D L V NG+Y
Sbjct: 188 GIARRYSTTITDLMNVNAM-GAPDVSSGDILAVPLSACASKFPRYASDFGLIVPNGSYAL 246
Query: 244 TANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSN 300
A CV+C C A + L C+P+ S C SM C +S L +GN T TS
Sbjct: 247 AAGHCVQCSC-ALGSRNLYCEPASLAVS--------CSSMQCRNSN-LMLGNITVQQTSA 296
Query: 301 NCNRTTCEYAGYNNLSILT 319
CN TTC+Y G N +ILT
Sbjct: 297 GCNVTTCDYNGIANGTILT 315
>gi|255545472|ref|XP_002513796.1| LysM domain GPI-anchored protein 1 precursor, putative [Ricinus
communis]
gi|223546882|gb|EEF48379.1| LysM domain GPI-anchored protein 1 precursor, putative [Ricinus
communis]
Length = 410
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 161/302 (53%), Gaps = 22/302 (7%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ SLF + + ++L AN+ P N +P+Q +K+PI C
Sbjct: 35 CNALLGYTLYTDLKVSEVASLFQIDPI-ALLTANSIDISYPDVENHILPSQLFLKIPIIC 93
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S Y + D L IA +I+ L+ +I EAN+I +P ++ +GQ+L +
Sbjct: 94 SCVDGIRKSVSTH-YKTRPSDTLASIADSIYSGLVSADQIKEANSIQDPSVLDVGQSLVV 152
Query: 156 PLPCSC-DDVDN-AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
PLPC+C + DN ++ ++VV++ + A IA ++ T LM +N + + S + A +
Sbjct: 153 PLPCTCFNGTDNLLPAIYLSYVVKDVDTLAGIASRYSTTITDLMNVNAMGNPS-IKADDI 211
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSP 273
L VPL AC S + D L V NG+Y +A+ CV+C C N L C P+
Sbjct: 212 LAVPLPACASKFPRYASDYGLIVPNGSYAISASHCVQCSC-GPGNLDLYCMPA------- 263
Query: 274 NSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS--LSTCP 328
S +C SM C +S L +GN T +S CN T+C Y GY N SI+T L++ CP
Sbjct: 264 -SLAVSCSSMQCRNSN-LMVGNVTWQRSSAGCNVTSCNYGGYVNGSIVTILSTSLQPRCP 321
Query: 329 SP 330
P
Sbjct: 322 GP 323
>gi|225459538|ref|XP_002285848.1| PREDICTED: lysM domain-containing GPI-anchored protein 1 [Vitis
vinifera]
Length = 418
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 155/293 (52%), Gaps = 20/293 (6%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C A+VGY +SE+ +LF V + +IL AN P N +P+Q +K+PI+C
Sbjct: 39 CNAMVGYTLYTDLKVSEVATLFQVDPI-AILTANAIDISYPDVENHILPSQLFLKIPIYC 97
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S Y + D L IA +I+ L+ ++ EAN+IS+P ++ +GQ L +
Sbjct: 98 SCVDGIRKSVTT-RYKTRPSDTLSSIADSIYAGLVSADQLREANSISDPSVLDVGQTLVV 156
Query: 156 PLPCSC-DDVDNAKVVHY-AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
PLPC+C + DN Y ++VV+ + IA ++ T LM +N + + + AG+
Sbjct: 157 PLPCTCFNGTDNLLPATYLSYVVKVDDTLTGIASRYSTTISDLMTVNAMGSPA-IKAGDI 215
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSP 273
L VPL AC S+ + D L V NG+Y TA+ CV+C C + L C P+
Sbjct: 216 LAVPLPACASNFPKYASDYGLAVPNGSYAITASHCVQCSC-GPGSLNLYCMPA------- 267
Query: 274 NSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS 323
S +C SM C ++ L +GN T +S CN T+C Y G+ N +I+ TL +
Sbjct: 268 -SLAVSCSSMQCRNTN-LMLGNVTMQKSSAGCNVTSCSYGGFVNGTIIATLTT 318
>gi|388515603|gb|AFK45863.1| unknown [Medicago truncatula]
Length = 412
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 158/295 (53%), Gaps = 20/295 (6%)
Query: 34 TAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKV 91
T+ C +L+GY +SE+ SLF + + S+L AN+ P + +P++ +K+
Sbjct: 30 TSDTCNSLLGYTLYTDLKVSELSSLFQIDPI-SLLTANSIDISYPDVEHHILPSKLYLKI 88
Query: 92 PIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQ 151
PI C C +G S Y ++ D L IA +I+G L+ ++ EAN++++P+++ +GQ
Sbjct: 89 PIQCSCIDGIRKSVST-NYKIRPSDTLSSIADSIYGGLVSSDQLREANSVTDPNVLDVGQ 147
Query: 152 NLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI 209
NL +PLPC+C + DN ++ ++VV+ S IA ++ T LM +N + + +
Sbjct: 148 NLVVPLPCTCFNGSDNGLPAIYMSYVVQPLDSLNNIAARYFTTLTDLMNVNAM-GTTGIS 206
Query: 210 AGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQ 269
AG+ L +P+ AC S DS D L V NG+Y TA CV+C N L C P+
Sbjct: 207 AGDILAIPIPACASKFPKDSADFGLLVPNGSYAITAGHCVQCS-RGPRNLNLYCMPA--- 262
Query: 270 PSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTL 321
S +C SM C S +L +GN T TS CN T+C Y G N +I TTL
Sbjct: 263 -----SLAVSCSSMQC-KSSNLMLGNVTVQQTSGGCNVTSCTYDGIVNGTIATTL 311
>gi|297845178|ref|XP_002890470.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297336312|gb|EFH66729.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 417
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 162/306 (52%), Gaps = 22/306 (7%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C +L+GY +SE+ SLF V + S+L AN P N +P++ +K+PI C
Sbjct: 40 CNSLLGYTLYTDLKVSEVASLFQVDPI-SVLLANAIDISYPDVENHILPSKLFLKIPITC 98
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S Y + D L IA +++G L+ ++I EAN++++P L+ +G +L I
Sbjct: 99 SCVDGIRKSVST-HYKTRPSDNLGSIADSVYGGLVSAEQIQEANSVNDPSLLDVGTSLVI 157
Query: 156 PLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
PLPC+C + DN+ V+ ++VV E + IA+++ T LM +N + + +G+
Sbjct: 158 PLPCACFNGTDNSLPAVYMSYVVREIDTLVGIARRYSTTITDLMNVNAMG-APDVSSGDI 216
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSP 273
L VPL AC S + D L V NG+Y A CV+C C A + L C+P+
Sbjct: 217 LAVPLSACASKFPRYASDFGLIVPNGSYALAAGHCVQCSC-ALGSRNLYCEPA------- 268
Query: 274 NSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTL-NSLS-TCP 328
S +C SM C +S L +GN T +S CN TTC+Y G N +ILT L SL CP
Sbjct: 269 -SLAVSCSSMQCRNSN-LMLGNITVQQSSAGCNVTTCDYNGIANGTILTLLTRSLQPRCP 326
Query: 329 SPSNNA 334
P A
Sbjct: 327 GPQQFA 332
>gi|302141828|emb|CBI19031.3| unnamed protein product [Vitis vinifera]
Length = 408
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 20/293 (6%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C A+VGY +SE+ +LF V + +IL AN P N +P+Q +K+PI+C
Sbjct: 29 CNAMVGYTLYTDLKVSEVATLFQVDPI-AILTANAIDISYPDVENHILPSQLFLKIPIYC 87
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S Y + D L IA +I+ L+ ++ EAN+IS+P ++ +GQ L +
Sbjct: 88 SCVDGIRKSVTT-RYKTRPSDTLSSIADSIYAGLVSADQLREANSISDPSVLDVGQTLVV 146
Query: 156 PLPCSC-DDVDNAKVVHY-AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
PLPC+C + DN Y ++VV+ + IA ++ T LM +N + + + AG+
Sbjct: 147 PLPCTCFNGTDNLLPATYLSYVVKVDDTLTGIASRYSTTISDLMTVNAMGSPA-IKAGDI 205
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSP 273
L VPL AC S+ + D L V NG+Y TA+ CV+C C + L C P+ S
Sbjct: 206 LAVPLPACASNFPKYASDYGLAVPNGSYAITASHCVQCSC-GPGSLNLYCMPASLAVS-- 262
Query: 274 NSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS 323
C SM C ++ L +GN T +S CN T+C Y G+ N +I+ TL +
Sbjct: 263 ------CSSMQCRNTN-LMLGNVTMQKSSAGCNVTSCSYGGFVNGTIIATLTT 308
>gi|356509418|ref|XP_003523446.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
[Glycine max]
Length = 417
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 20/292 (6%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ SLF + + S+L AN P + +P++ +K+PI C
Sbjct: 36 CNALLGYTLYTDLKVSEVASLFQIDPI-SLLTANAIDISYPDVEHHILPSKLFLKIPISC 94
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S Y + D L IA ++ L+ ++ EAN+IS+P ++ +GQNL +
Sbjct: 95 SCVDGIRKSVAT-HYKTRPSDTLSSIADAVYAGLVSSDQLREANSISDPSVLDVGQNLVV 153
Query: 156 PLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
PLPC+C + DN+ ++ ++VV + A IA ++ T LM +N + + + G+
Sbjct: 154 PLPCTCFNGSDNSLPAIYLSYVVRPVDTLAAIAARYFTTLTDLMNVNAM-GSTAINDGDI 212
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSP 273
L VP+ AC S+ + D L V NG+Y TA CV+C C N L C P+
Sbjct: 213 LAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSC-GPKNLDLYCMPA------- 264
Query: 274 NSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLN 322
S +C SM C S L +GN T TS CN T+C Y G N SI+TTL+
Sbjct: 265 -SLAVSCSSMQCRGSN-LMLGNVTVQQTSGGCNVTSCNYDGIVNGSIVTTLS 314
>gi|218202258|gb|EEC84685.1| hypothetical protein OsI_31607 [Oryza sativa Indica Group]
Length = 401
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 29 KCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGAN--NFPPGTPRNFSVPAQ 86
CS+ TA C AL+ Y ++E+ +LF+ L +IL AN +F P + +PA
Sbjct: 29 SCSSSTA--CPALLSYTLYADLKLAELAALFSADPL-AILAANSIDFAVPDPADRILPAG 85
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI--SNP 144
P++VP+ C CS+G V Y + D L +A +++G L I ++N I + P
Sbjct: 86 LPLRVPVPCACSDGIRRVTTV-RYVARPGDTLASVASSVYGGLTTPDWISDSNGILGAKP 144
Query: 145 DL-IQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
D + G L +PL C+C VDN V+ +V +G + A +AQ++ T LM +N
Sbjct: 145 DAAVDAGTTLFVPLHCACFGGVDNGLPAVYLTYVAGKGDTVAAVAQRYRTTATDLMSVND 204
Query: 202 IHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTL 261
+ +L AG+ + VPL AC SS A + D L VANGTY TAN CV+C C N L
Sbjct: 205 MAT-PELAAGDIIVVPLPACTSSFPAFTADYGLAVANGTYAVTANRCVQCSC-GPGNLDL 262
Query: 262 QCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNN 314
C P+ S TC SM C +S S+ +GN T TS+ C+ T+C Y G+ N
Sbjct: 263 FCVPAPLADS-------TCSSMQCANS-SMMLGNFTLLMTSSGCSVTSCSYGGFVN 310
>gi|115479483|ref|NP_001063335.1| Os09g0452200 [Oryza sativa Japonica Group]
gi|51535933|dbj|BAD38015.1| putative Erwinia induced protein 1 [Oryza sativa Japonica Group]
gi|51536096|dbj|BAD38221.1| putative Erwinia induced protein 1 [Oryza sativa Japonica Group]
gi|113631568|dbj|BAF25249.1| Os09g0452200 [Oryza sativa Japonica Group]
gi|215741031|dbj|BAG97526.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765308|dbj|BAG87005.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641700|gb|EEE69832.1| hypothetical protein OsJ_29593 [Oryza sativa Japonica Group]
Length = 401
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 29 KCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGAN--NFPPGTPRNFSVPAQ 86
CS+ TA C AL+ Y ++E+ +LF+ L +IL AN +F P + +PA
Sbjct: 29 SCSSSTA--CPALLSYTLYADLKLAELAALFSADPL-AILAANSIDFAVPDPADRILPAG 85
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI--SNP 144
P++VP+ C CS+G V Y + D L +A +++G L I ++N I + P
Sbjct: 86 LPLRVPVPCACSDGIRRVTTV-RYVARPGDTLASVASSVYGGLTTPDWISDSNGILGAKP 144
Query: 145 DL-IQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
D + G L +PL C+C VDN V+ +V +G + A +AQ++ T LM +N
Sbjct: 145 DAAVDAGTTLFVPLHCACFGGVDNGLPAVYLTYVAGKGDTVAAVAQRYRTTATDLMSVND 204
Query: 202 IHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTL 261
+ +L AG+ + VPL AC SS A + D L VANGTY TAN CV+C C N L
Sbjct: 205 MAT-PELAAGDIIVVPLPACTSSFPAFTADYGLAVANGTYAVTANRCVQCSC-GPGNLDL 262
Query: 262 QCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNN 314
C P+ S TC SM C +S S+ +GN T TS+ C+ T+C Y G+ N
Sbjct: 263 FCVPAPLADS-------TCSSMQCANS-SMMLGNFTLLMTSSGCSVTSCSYGGFVN 310
>gi|242044884|ref|XP_002460313.1| hypothetical protein SORBIDRAFT_02g026330 [Sorghum bicolor]
gi|241923690|gb|EER96834.1| hypothetical protein SORBIDRAFT_02g026330 [Sorghum bicolor]
Length = 409
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 145/274 (52%), Gaps = 20/274 (7%)
Query: 66 SILGAN--NFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
+IL AN +F P + +PA P++VP+ C CS+G + V Y + D L +A
Sbjct: 71 AILAANAIDFGVPDPADRILPAGLPLRVPVPCACSDGIRKATSV-RYVARAGDTLASVAA 129
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDN-AKVVHYAHVVEEGSS 181
+++G L I ++N + + + G L +PL C+C VD+ A V+ +VV EG +
Sbjct: 130 SVYGGLTTADWIRDSNGMPDDAALDAGTTLFVPLHCACFGGVDSGAPAVYLTYVVAEGDT 189
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTY 241
IA++F T + LM +N + + + AG+ + VPL AC SS A + D L VANGTY
Sbjct: 190 VPAIARRFRTTGNDLMSVNDMAT-ADVAAGDIIVVPLPACASSFPAFTSDAGLAVANGTY 248
Query: 242 TFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---T 298
TAN CV+C C N L C P+ S TC SM C +S S+ +GN T T
Sbjct: 249 AITANRCVQCSC-GPGNLDLFCVPAPLADS-------TCSSMQCSNS-SMMLGNFTLQMT 299
Query: 299 SNNCNRTTCEYAGYNNLSILTTLNS--LSTCPSP 330
S C+ T+C Y GY N +IL TL + CP P
Sbjct: 300 SAGCSVTSCSYGGYVNGTILATLTTSLKPQCPGP 333
>gi|356515884|ref|XP_003526627.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
[Glycine max]
Length = 418
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 20/292 (6%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ SLF + + ++L AN P + +P++ +KVPI C
Sbjct: 37 CNALLGYTLYTDLKVSEVASLFQIDPI-ALLTANAIDISYPDVEHHILPSKLFLKVPISC 95
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S Y + D L IA ++ L+ ++ EAN++S+P ++ +GQNL +
Sbjct: 96 SCVDGIRKSVAT-HYKTRPSDTLSSIADAVYAGLVSSDQLREANSLSDPSVLDVGQNLVV 154
Query: 156 PLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
PLPC+C + DN+ ++ ++VV + A +A ++ T LM +N + + + G+
Sbjct: 155 PLPCTCFNGSDNSLPAIYLSYVVRPVDTLAAVAARYFTTLTDLMNVNAM-GSTAINDGDI 213
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSP 273
L VP+ AC S+ + D + V NG+Y TA CV+C C N L C P+
Sbjct: 214 LAVPIPACASNFPKSASDFGMLVPNGSYAITAGHCVQCSC-GPKNLDLYCMPA------- 265
Query: 274 NSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLN 322
S +C SM C S L +GN T TS CN T C Y G N SI+TTL+
Sbjct: 266 -SLAVSCSSMQCRGSN-LMLGNVTVQQTSGGCNVTACNYDGIVNGSIVTTLS 315
>gi|51091208|dbj|BAD35901.1| putative Erwinia induced protein 1 [Oryza sativa Japonica Group]
gi|218197782|gb|EEC80209.1| hypothetical protein OsI_22104 [Oryza sativa Indica Group]
Length = 409
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 154/306 (50%), Gaps = 27/306 (8%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ +LF + R++L AN +P N +PA P++VP C
Sbjct: 40 CAALLGYTLYADMKVSEVAALFG-ADPRAVLAANALDFASPGAANRILPAGLPLRVPTRC 98
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPDL-IQIGQN 152
CS+G S V Y+ + D L +A +F L +I AN +S +PD + G
Sbjct: 99 ACSDGVRKSVAV-RYSARPADTLASVADVVFAGLASADQIRTANGLSAEDPDAPLDAGAT 157
Query: 153 LTIPLPCSCDDV--DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
L +PLPC+C + +N V+ ++VV G + IA T + +N + S ++A
Sbjct: 158 LVVPLPCACFNSTDNNLPAVYLSYVVRVGDTVQSIAATHATTVTDISNVNAM--GSPIVA 215
Query: 211 -GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQ 269
G+ L +PL AC S + D L VANGTY TA +CV+C C + L C P+
Sbjct: 216 PGDILAIPLPACASMFPNSASDYGLLVANGTYALTAGNCVQCSC-GPGDLKLYCTPASLT 274
Query: 270 PSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS--L 324
+C SM C +S L +GN T TS CN ++C YAG N +I T+L+S
Sbjct: 275 --------ASCSSMQCPNSN-LMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSLSSGLQ 325
Query: 325 STCPSP 330
TCP P
Sbjct: 326 PTCPGP 331
>gi|302796312|ref|XP_002979918.1| hypothetical protein SELMODRAFT_111811 [Selaginella moellendorffii]
gi|300152145|gb|EFJ18788.1| hypothetical protein SELMODRAFT_111811 [Selaginella moellendorffii]
Length = 327
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 40/309 (12%)
Query: 30 CSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPR--NFSVPAQK 87
CS + +C++L+GY T IS + ++F V ILG+NN+ P + + AQ+
Sbjct: 28 CSGED--KCKSLLGYRIVADTRISNVVAMFGVTT-DEILGSNNYEVAIPEPDDVIIQAQE 84
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEAN-NISNPD 145
+++P+ C CSNG +D + VY+V+++ F I+ +FG ++ +I +AN N D
Sbjct: 85 LLRIPVSCACSNGIRRTDSI-VYSVRQEGETLFSISNEVFGGMVTPLQIFQANSNDPGGD 143
Query: 146 L----------IQIGQNLTIPLPCSCD--DVDNAKVVHYAHVVEEGSSFALIAQKFGTDR 193
L + IG+ L IP PC+C+ + + +++V+ G S IA F +
Sbjct: 144 LSERGLNSSTEVAIGKRLLIPFPCACNAGNFKGIPAMFVSYMVQRGESTFEIASLFDSSV 203
Query: 194 DTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQC 253
++++LNG+ S L AG+ L+VP I + D L V NGTYT TA+ CV+C C
Sbjct: 204 SSVVELNGMQKGSSLAAGDVLEVP-------IPGKAVDYGLMVPNGTYTITADRCVQCSC 256
Query: 254 DATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTS---NNCNRTTCEYA 310
N L C P +P+S CP+ C S +L IG TT C T+C Y
Sbjct: 257 ---NYPRLDCTP------APSSSGFPCPAPRCAGS-NLKIGEFTTKASLQGCQVTSCSYN 306
Query: 311 GYNNLSILT 319
G+++ I T
Sbjct: 307 GFHDSVIFT 315
>gi|51243456|gb|AAT99435.1| LysM-domain GPI-anchored protein [Oryza sativa Japonica Group]
Length = 409
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 153/306 (50%), Gaps = 27/306 (8%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ +LF + R++L AN +P N +PA P++VP C
Sbjct: 40 CAALLGYTLYADMKVSEVAALFG-ADPRAVLAANALDFASPGAANRILPAGLPLRVPTRC 98
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPDL-IQIGQN 152
CS+G S V Y+ + D L +A +F L +I AN +S +PD + G
Sbjct: 99 ACSDGVRKSVAV-RYSARPADTLASVADVVFAGLASADQIRTANGLSAEDPDAPLDAGAT 157
Query: 153 LTIPLPCSCDDV--DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
L +PLPC+C + +N V+ ++VV G + IA T + +N + S ++A
Sbjct: 158 LVVPLPCACFNSTDNNLPAVYLSYVVRVGDTVQSIAATHATTVTDISNVNAM--GSPIVA 215
Query: 211 -GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQ 269
G+ L +PL AC S + D L VANGTY TA +CV+ C + L C P+
Sbjct: 216 PGDILAIPLPACASMFPNSASDYGLLVANGTYALTAGNCVQSSC-GPGDLKLYCTPASLT 274
Query: 270 PSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS--L 324
+C SM C +S L +GN T TS CN ++C YAG N +I T+L+S
Sbjct: 275 --------ASCSSMQCPNSN-LMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSLSSGLQ 325
Query: 325 STCPSP 330
TCP P
Sbjct: 326 PTCPGP 331
>gi|302811420|ref|XP_002987399.1| hypothetical protein SELMODRAFT_126058 [Selaginella moellendorffii]
gi|300144805|gb|EFJ11486.1| hypothetical protein SELMODRAFT_126058 [Selaginella moellendorffii]
Length = 327
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 40/309 (12%)
Query: 30 CSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPR--NFSVPAQK 87
CS + +C++L+GY T IS + ++F V ILG+NN+ P + + AQ+
Sbjct: 28 CSGED--KCKSLLGYRIVADTRISNVVAMFGVTT-DEILGSNNYEVAIPEPDDVIIQAQE 84
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEAN------N 140
+++P+ C CSNG +D + VY+V+++ F I+ +FG ++ +I +AN +
Sbjct: 85 LLRIPVSCACSNGIRRTDSI-VYSVRQEGETLFSISNEVFGGMVTPLQIFQANSNDPAGD 143
Query: 141 ISNPDL-----IQIGQNLTIPLPCSCD--DVDNAKVVHYAHVVEEGSSFALIAQKFGTDR 193
+S L + IG+ L IP PC+C+ + + +++V+ G S IA F +
Sbjct: 144 LSERGLNSSTEVAIGKRLMIPFPCACNAGNFKGIPAMFVSYMVQRGESTFEIASLFDSSV 203
Query: 194 DTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQC 253
++++LNG+ S L AG+ L+VP I + D L V NGTYT TA+ CV+C C
Sbjct: 204 SSVVELNGMQKGSSLAAGDVLEVP-------IPGKAVDYGLMVPNGTYTITADRCVQCSC 256
Query: 254 DATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTS---NNCNRTTCEYA 310
N L C P +P+S CP+ C S +L IG TT C T+C Y
Sbjct: 257 ---NYPRLDCTP------APSSSGCPCPAPRCAGS-NLKIGEFTTKASLQGCQVTSCSYN 306
Query: 311 GYNNLSILT 319
G+++ I
Sbjct: 307 GFHDSVIFV 315
>gi|242092364|ref|XP_002436672.1| hypothetical protein SORBIDRAFT_10g006860 [Sorghum bicolor]
gi|241914895|gb|EER88039.1| hypothetical protein SORBIDRAFT_10g006860 [Sorghum bicolor]
Length = 407
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 154/309 (49%), Gaps = 27/309 (8%)
Query: 35 AARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVP 92
A C AL+GY +SE+ +LF + ++L AN +P N +P P++VP
Sbjct: 34 ADACPALLGYTLYADMKVSEVAALFG-ADPAAVLAANALDFASPGAANRILPKGTPLRVP 92
Query: 93 IHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPDL-IQI 149
C C++G S V Y + D L IA +F L +I AN ++ +PD +
Sbjct: 93 TRCACADGVRKSVAV-RYAARPSDTLGSIAEVVFAGLPSADQIRTANGLAAEDPDAPLSP 151
Query: 150 GQNLTIPLPCSCDDV--DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSK 207
GQ L +PLPC C + +N V+ ++VV+ G + IA T + +N + S
Sbjct: 152 GQKLVVPLPCVCFNSTDNNLPAVYLSYVVQVGDTVESIAASHTTTVTDISNVNAM--GSP 209
Query: 208 LIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPS 266
++A G+ L +PL AC S+ + D L VANGTY TA +CV+C C + L C P+
Sbjct: 210 IVAPGDILAIPLPACASAFPNSASDYGLLVANGTYALTAGNCVECSCGPA-DLNLYCTPA 268
Query: 267 QFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS 323
+C SM C +S SL +GN T T+ C ++C YAGY N +I T+L+S
Sbjct: 269 SLT--------ASCSSMQCSNS-SLILGNVTTQPTTGGCGVSSCNYAGYVNGTIATSLSS 319
Query: 324 --LSTCPSP 330
CP P
Sbjct: 320 GLQPMCPGP 328
>gi|297839623|ref|XP_002887693.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297333534|gb|EFH63952.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 425
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 176/341 (51%), Gaps = 22/341 (6%)
Query: 7 KLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRS 66
K ++L + ++L +++TA+ T C +L+GY ++E+ SLF V + S
Sbjct: 6 KPLILFLILASSLVSMATAKSTIEPCSTKETCNSLLGYTLYTDLKVTEVASLFQVDPV-S 64
Query: 67 ILGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
+L +N+ P N +PA+ +K+PI C C +G S Y + D L IA +
Sbjct: 65 MLLSNSIDISYPDVENHVLPAKLFLKIPITCSCVDGIRKSLSTH-YKTRTSDTLGSIADS 123
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSF 182
++G L+ ++I AN+ ++ ++ +G L IPLPC+C + D + ++ ++VV +
Sbjct: 124 VYGGLVSPEQIQVANSETDLSVLDVGTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTM 183
Query: 183 ALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYT 242
A IA++F T L +N + + G+ L VPL AC+S+ + D L + NG+Y
Sbjct: 184 AGIAKRFSTTVTDLTNVNAM-GAPDINPGDILAVPLLACSSNFPKYATDYGLIIPNGSYA 242
Query: 243 FTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TS 299
TA CV+C C + ++ C+P+ S C SM C +S + +GN T +S
Sbjct: 243 LTAGHCVQCSC-VLGSRSMYCEPASISVS--------CSSMRCRNSNYM-LGNITSQQSS 292
Query: 300 NNCNRTTCEYAGYNNLSILTTLN-SLS-TCPSPSNNASRIG 338
+ C TTC Y G+ + +ILTTL+ SL CP P A I
Sbjct: 293 SGCKLTTCSYNGFASGTILTTLSMSLQPRCPGPQQLAPLIA 333
>gi|219887641|gb|ACL54195.1| unknown [Zea mays]
Length = 343
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 163/328 (49%), Gaps = 32/328 (9%)
Query: 5 QLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNL 64
+L L +LL + + LS + C++ +A C AL+ Y ++E+
Sbjct: 13 RLALFVLLLSGSGVPTALSKSTLESCASSSA--CPALLSYTLYADLKLAEL--------- 61
Query: 65 RSILGAN--NFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+IL AN +F P + +PA ++VP+ C CS+G + Y + D L +A
Sbjct: 62 -AILAANAMDFAVPDPGDRILPAGLALRVPVPCACSDGIRKATSA-RYVARAGDTLASVA 119
Query: 123 RTIFGQLLKYQKIVEANNISNPD--LIQIGQNLTIPLPCSC-DDVDN-AKVVHYAHVVEE 178
+++G L I ++N ++ + + G L +PL C+C D+ A V + V E
Sbjct: 120 GSVYGGLTTADWIRDSNGMAEEEDAALDAGTTLFVPLHCACFGGADSGAPAVFLTYPVAE 179
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVAN 238
G + IA++F T + LM +N + + + AG+ + VPL AC SS A + D L VAN
Sbjct: 180 GDTVPAIARRFRTTGNDLMSVNDLAT-ADVAAGDIIVVPLPACASSFPAFASDAGLAVAN 238
Query: 239 GTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT- 297
GTY TAN CV+C C N L C P+ S TC SM C +S S+ +GN T
Sbjct: 239 GTYAVTANRCVQCSC-GPGNLDLFCVPAPLADS-------TCSSMQCSNS-SMMLGNFTL 289
Query: 298 --TSNNCNRTTCEYAGYNNLSILTTLNS 323
TS C+ T+C Y GY N +IL TL +
Sbjct: 290 LMTSAGCSVTSCSYGGYANGTILATLTT 317
>gi|30699276|ref|NP_177886.2| LysM domain-containing GPI-anchored protein 2 [Arabidopsis
thaliana]
gi|75223282|sp|Q6NPN4.1|LYM3_ARATH RecName: Full=LysM domain-containing GPI-anchored protein 2; Flags:
Precursor
gi|38603836|gb|AAR24663.1| At1g77630 [Arabidopsis thaliana]
gi|51971735|dbj|BAD44532.1| predicted GPI-anchored protein [Arabidopsis thaliana]
gi|332197881|gb|AEE36002.1| LysM domain-containing GPI-anchored protein 2 [Arabidopsis
thaliana]
Length = 423
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 177/341 (51%), Gaps = 22/341 (6%)
Query: 7 KLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRS 66
K +LL + ++L++++TA+ + C +L+GY ++E+ SLF V + S
Sbjct: 6 KPLLLFLILASSLASMATAKSTIEPCSSKDTCNSLLGYTLYTDLKVTEVASLFQVDPV-S 64
Query: 67 ILGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
+L +N+ P N +PA+ +K+PI C C +G S Y + D L IA +
Sbjct: 65 MLLSNSIDISYPDVENHVLPAKLFLKIPITCSCVDGIRKSLSTH-YKTRTSDTLGSIADS 123
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSF 182
++G L+ ++I AN+ ++ ++ +G L IPLPC+C + D + ++ ++VV +
Sbjct: 124 VYGGLVSPEQIQVANSETDLSVLDVGTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTM 183
Query: 183 ALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYT 242
A IA++F T L +N + + G+ L VPL AC+S+ + D L + NG+Y
Sbjct: 184 AGIAKRFSTSVTDLTNVNAM-GAPDINPGDILAVPLLACSSNFPKYATDYGLIIPNGSYA 242
Query: 243 FTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TS 299
TA CV+C C + ++ C+P+ S C SM C +S + +GN T +S
Sbjct: 243 LTAGHCVQCSC-VLGSRSMYCEPASISVS--------CSSMRCRNSNFM-LGNITSQQSS 292
Query: 300 NNCNRTTCEYAGYNNLSILTTLN-SLS-TCPSPSNNASRIG 338
+ C TTC Y G+ + +ILTTL+ SL CP P A I
Sbjct: 293 SGCKLTTCSYNGFASGTILTTLSMSLQPRCPGPQQLAPLIA 333
>gi|356527809|ref|XP_003532499.1| PREDICTED: lysM domain-containing GPI-anchored protein 2-like
[Glycine max]
Length = 328
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 156/300 (52%), Gaps = 18/300 (6%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFS--VPAQKPIKVPIHC 95
C +L+ YL P + +SEI + F V N IL +N+ P TP + + A+ +K+PI C
Sbjct: 41 CPSLLSYLLPWDSKLSEIATRFNV-NFFDILASNSLFPITPSSAHQILSAKSQVKIPISC 99
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQ-KIVEANNISNPDLIQIGQNLT 154
C +G S +YTV D L I+ G + Q KIV A N +NP + L
Sbjct: 100 SCVDGIRRSMST-IYTVHAADTLASISEGYGGLVSAEQIKIVNAINATNP--LTYRGTLV 156
Query: 155 IPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGE 212
IPLPC+C D+V+N ++ ++VV+ S IA KFGT L +NG ++ + G+
Sbjct: 157 IPLPCTCFDNVNNGGNAIYMSYVVQRRESLGSIATKFGTTVSDLETVNGF-GEATVDPGD 215
Query: 213 PLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSS 272
L +P+ AC SS + +D + V NG+YT TA +C+KC C+ T + TLQC PS
Sbjct: 216 ILSIPIAAC-SSATLNWYDESMIVPNGSYTLTATNCIKCTCEPT-DITLQCVPSGLDVPC 273
Query: 273 PNSRWKTCPSMLCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLNSLSTCPSPSN 332
N R K +++ GD + + + T CN + C Y G+ IL+++ S P N
Sbjct: 274 YNLRCKG-SNLIIGD-QCVDLSQTA----CNVSQCVYRGHRGGKILSSMKKSSYLECPGN 327
>gi|225455922|ref|XP_002276124.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
[Vitis vinifera]
Length = 408
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 25/291 (8%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFS--VPAQKPIKVPIHC 95
C +L+ YL P + +SEI S F V N+ IL N+ P P + S +PA+ +KVPI C
Sbjct: 43 CNSLLSYLLPWDSKLSEIASRFQV-NISDILATNSMDPTRPSSASQIIPAKSLVKVPILC 101
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S YTVK D +D I+ +G L+ +I N GQ+L I
Sbjct: 102 PCVDGIRRSLST-TYTVKAADTMDLISEG-YGGLVSADQIRSVNGGKGAGY---GQSLVI 156
Query: 156 PLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
PLPC+C + + A V+ ++VV+ G S I ++ T L +NG+ + G+
Sbjct: 157 PLPCTCFGNTNNGATAVYMSYVVQRGESLGSIGARYHTTVTDLAAVNGL-GQPVINPGDI 215
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSP 273
L +P+ AC SS ++ L VANG+Y TAN+C++C C T + LQC PS +
Sbjct: 216 LAIPIPAC-SSANLRWYNESLIVANGSYALTANNCIRCSCTPT-HLNLQCFPSGIMVA-- 271
Query: 274 NSRWKTCPSMLCGDSESLSIGN---TTTSNNCNRTTCEYAGYNNLSILTTL 321
C + C S L IG+ T T CN TTC Y G+ I +L
Sbjct: 272 ------CNRLQCKASH-LFIGDVVVTKTPAGCNITTCVYRGHGGRKIFRSL 315
>gi|219885227|gb|ACL52988.1| unknown [Zea mays]
Length = 412
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 170/337 (50%), Gaps = 25/337 (7%)
Query: 5 QLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNL 64
+L L +LL + + LS + C++ +A C AL+ Y ++E+ +LF L
Sbjct: 13 RLALFVLLLSGSGVPTALSKSTLESCASSSA--CPALLSYTLYADLKLAELAALFAADPL 70
Query: 65 RSILGAN--NFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+IL AN +F P + +PA ++VP+ C CS+G + Y + D L +A
Sbjct: 71 -AILAANAMDFAVPDPGDRILPAGLALRVPVPCACSDGIRKATSA-RYVARAGDTLASVA 128
Query: 123 RTIFGQLLKYQKIVEANNISNPD--LIQIGQNLTIPLPCSC-DDVDN-AKVVHYAHVVEE 178
+++G L I ++N ++ + + G L +PL C+C D+ A V + V E
Sbjct: 129 GSVYGGLTTADWIRDSNGMAEEEDAALDAGTTLFVPLHCACFGGADSGAPAVFLTYPVAE 188
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVAN 238
G + IA++F T + LM +N + + + AG+ + VPL AC SS A + D L VAN
Sbjct: 189 GDTVPAIARRFRTTGNDLMSVNDLAT-ADVAAGDIIVVPLPACASSFPAFASDAGLAVAN 247
Query: 239 GTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT- 297
GTY TAN CV+C C N L C P+ S TC SM C +S S+ +GN T
Sbjct: 248 GTYAVTANRCVQCSC-GPGNLDLFCVPAPLADS-------TCSSMQCSNS-SMMLGNFTL 298
Query: 298 --TSNNCNRTTCEYAGYNNLSILTTLNS--LSTCPSP 330
TS C+ T+C Y GY N +IL TL + CP P
Sbjct: 299 LMTSAGCSVTSCSYGGYANGTILATLTTSLKPQCPGP 335
>gi|414885719|tpg|DAA61733.1| TPA: erwinia induced protein 1 [Zea mays]
Length = 723
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 170/337 (50%), Gaps = 25/337 (7%)
Query: 5 QLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNL 64
+L L +LL + + LS + C++ +A C AL+ Y ++E+ +LF L
Sbjct: 324 RLALFVLLLSGSGVPTALSKSTLESCASSSA--CPALLSYTLYADLKLAELAALFAADPL 381
Query: 65 RSILGAN--NFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+IL AN +F P + +PA ++VP+ C CS+G + Y + D L +A
Sbjct: 382 -AILAANAMDFAVPDPGDRILPAGLALRVPVPCACSDGIRKATSA-RYVARAGDTLASVA 439
Query: 123 RTIFGQLLKYQKIVEANNISNPD--LIQIGQNLTIPLPCSC-DDVDN-AKVVHYAHVVEE 178
+++G L I ++N ++ + + G L +PL C+C D+ A V + V E
Sbjct: 440 GSVYGGLTTADWIRDSNGMAEEEDAALDAGTTLFVPLHCACFGGADSGAPAVFLTYPVAE 499
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVAN 238
G + IA++F T + LM +N + + + AG+ + VPL AC SS A + D L VAN
Sbjct: 500 GDTVPAIARRFRTTGNDLMSVNDLAT-ADVAAGDIIVVPLPACASSFPAFASDAGLAVAN 558
Query: 239 GTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT- 297
GTY TAN CV+C C N L C P+ S TC SM C +S S+ +GN T
Sbjct: 559 GTYAVTANRCVQCSC-GPGNLDLFCVPAPLADS-------TCSSMQCSNS-SMMLGNFTL 609
Query: 298 --TSNNCNRTTCEYAGYNNLSILTTLNS--LSTCPSP 330
TS C+ T+C Y GY N +IL TL + CP P
Sbjct: 610 LMTSAGCSVTSCSYGGYANGTILATLTTSLKPQCPGP 646
>gi|326514248|dbj|BAJ92274.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 151/311 (48%), Gaps = 27/311 (8%)
Query: 33 QTAARCQALVGYLPPNKTTISEIQSLF--TVKNLRSILGANNFPPGTPRNFSVPAQKPIK 90
TA C AL+GY +SE+ +LF L + + PG N +PA ++
Sbjct: 30 STADSCAALLGYSLYADMKVSEVAALFGADPAALLAANALDFASPGA-ANRILPAGLLLR 88
Query: 91 VPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPD---LI 147
VP C C++G S V Y + D L +A +F L +I AN ++ D L+
Sbjct: 89 VPTRCACADGVRKSVSV-RYAARPADTLATVADVVFAGLASADQIRNANGLAEADPDALL 147
Query: 148 QIGQNLTIPLPCSCDDV--DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDD 205
GQ L +P PC C + +N V+ ++VV G + IA T L +N +
Sbjct: 148 DAGQILVVPFPCVCLNSTDNNLPAVYLSYVVRVGDTVESIAASHATTVTDLSNVNAM--G 205
Query: 206 SKLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCK 264
S ++A G+ L +PL AC S+ + D L VANGTY TA +CV+C C + L C
Sbjct: 206 SPIVAPGDILAIPLSACASTFPNFASDYGLLVANGTYALTAGNCVECSC-GPGDLNLYCT 264
Query: 265 PSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTL 321
P+ S +C SM C +S SL +GN T TS C ++C YAG+ N SI T+L
Sbjct: 265 PA--------SLGTSCSSMQCSNS-SLMLGNMTSQPTSGGCGVSSCSYAGFINGSIATSL 315
Query: 322 NS--LSTCPSP 330
+S TCP P
Sbjct: 316 SSGLQPTCPGP 326
>gi|255585434|ref|XP_002533411.1| LysM domain GPI-anchored protein 1 precursor, putative [Ricinus
communis]
gi|223526740|gb|EEF28969.1| LysM domain GPI-anchored protein 1 precursor, putative [Ricinus
communis]
Length = 405
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 153/309 (49%), Gaps = 23/309 (7%)
Query: 34 TAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNF-PPGTP--RNFSVPAQKPIK 90
++ C +L+ YL P + + I F V N+ IL N+ P P N + A +K
Sbjct: 34 SSDSCPSLLSYLLPFDSQLPAIAYRFGV-NISDILATNSIDPEALPSINNQILHANSLVK 92
Query: 91 VPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIG 150
+PI C C G YTVK D +D I+ FG L+ ++I N I+ + + IG
Sbjct: 93 IPISCPCVEGIRRLMST-SYTVKPADTVDSISLG-FGGLVSGEQITSTNGINANNPLMIG 150
Query: 151 QNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKL 208
Q L IPLPCSC D+ DN V+ ++VV+ G S IA +F T L +NG ++
Sbjct: 151 QKLVIPLPCSCFDNNDNGVAAVYMSYVVQNGESLEKIAMEFDTTVLDLENVNGF-GQPQV 209
Query: 209 IAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQF 268
G+ L VP+ AC SS + ++ L V NG+Y TAN+C+KC C N +LQC PS
Sbjct: 210 DPGDILAVPISAC-SSTNLNWYNQSLLVPNGSYALTANNCIKCLC-LPRNLSLQCLPSGI 267
Query: 269 QPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNSLS 325
+C + C DS +L IG+ T+ CN T C Y GY+ IL L S
Sbjct: 268 --------GDSCSHLQCKDS-NLFIGDQYVQHTATACNITACVYRGYSGRKILRKLLKSS 318
Query: 326 TCPSPSNNA 334
P N++
Sbjct: 319 NVQCPGNHS 327
>gi|357118400|ref|XP_003560943.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
[Brachypodium distachyon]
Length = 397
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 152/309 (49%), Gaps = 27/309 (8%)
Query: 35 AARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVP 92
A C AL+GY +SE+ +LF + +L AN +P N +PA ++VP
Sbjct: 32 ADTCAALLGYTLYADMKVSEVAALFG-ADPAGLLAANALDFASPGSSNRILPAGLALRVP 90
Query: 93 IHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPDL-IQI 149
C CS+G S V Y + D L +A +F L +I AN ++ +PD +
Sbjct: 91 TRCACSDGVRRSVSV-RYAARPADTLASVADVVFSGLASADQIRNANGLAEEDPDAQLDP 149
Query: 150 GQNLTIPLPCSCDDV--DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSK 207
GQ L IP PC C + +N V+ ++V G + IA T L +N + S
Sbjct: 150 GQMLVIPFPCICFNSTDNNLPAVYLSYVARVGDTVESIAASHATTVTDLSNVNAM--GSP 207
Query: 208 LIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPS 266
++A G+ L +PL AC S+ + D L VANGTY TA +CV+C C + L C P+
Sbjct: 208 VVAPGDILAIPLPACASTFPNSASDYGLLVANGTYALTAGNCVECSC-GPGDLNLYCTPA 266
Query: 267 QFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS 323
S TC SM C +S L +GN T T++ C+ ++C YAG N SI T+L+S
Sbjct: 267 --------SLTATCSSMQCPNSN-LMLGNVTAQSTTSGCSVSSCNYAGLVNGSIATSLSS 317
Query: 324 --LSTCPSP 330
TCP P
Sbjct: 318 GLQPTCPGP 326
>gi|302821935|ref|XP_002992628.1| hypothetical protein SELMODRAFT_45167 [Selaginella moellendorffii]
gi|300139592|gb|EFJ06330.1| hypothetical protein SELMODRAFT_45167 [Selaginella moellendorffii]
Length = 301
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 154/319 (48%), Gaps = 26/319 (8%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKT-TISEIQSLFTVKNLRS 66
L++LL A L + + + C A CQAL+ Y + + TI+ I SLF++ +++
Sbjct: 2 LIVLLLGSIAPLQLHAASFNESCRATVDPPCQALLAYRSSSLSPTIANISSLFSIP-VQA 60
Query: 67 ILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIF 126
IL AN F P + + + +++P+ C C+ G YT+ D L IA +
Sbjct: 61 ILAANAFSPSDDPSARLSTGETLRIPVPCSCA-ANGQRSGNTTYTIAPGDFLFQIANNRY 119
Query: 127 GQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFAL 184
G L+ ++I AN I + D I GQNLTIP PCSC + + A+VV++G S
Sbjct: 120 GGLVTIEEIAAANGIVDLDKILAGQNLTIPYPCSCRGNSFGGRDALFMAYVVQDGESREG 179
Query: 185 IAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFT 244
+ + ++ +LN + L+ AC + + D+ L VA+G Y T
Sbjct: 180 FYRSYNLSQEEFDRLNPSVNLDDLVV-----CMCVACRARFNRSALDSNLTVASGGYAIT 234
Query: 245 ANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNN--- 301
AN CV+C CD T L C + P++P + C S+ C +S L IGN +T N
Sbjct: 235 ANGCVQCNCDGTE---LHCTRA---PTAP----RNC-SLGCRNSR-LQIGNFSTGANSSG 282
Query: 302 -CNRTTCEYAGYNNLSILT 319
C +C Y GYNN I T
Sbjct: 283 GCTIESCLYDGYNNRQIFT 301
>gi|414885720|tpg|DAA61734.1| TPA: hypothetical protein ZEAMMB73_174964 [Zea mays]
Length = 663
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 167/328 (50%), Gaps = 23/328 (7%)
Query: 5 QLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNL 64
+L L +LL + + LS + C++ +A C AL+ Y ++E+ +LF L
Sbjct: 324 RLALFVLLLSGSGVPTALSKSTLESCASSSA--CPALLSYTLYADLKLAELAALFAADPL 381
Query: 65 RSILGAN--NFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+IL AN +F P + +PA ++VP+ C CS+G + Y + D L +A
Sbjct: 382 -AILAANAMDFAVPDPGDRILPAGLALRVPVPCACSDGIRKATSA-RYVARAGDTLASVA 439
Query: 123 RTIFGQLLKYQKIVEANNISNPD--LIQIGQNLTIPLPCSC-DDVDN-AKVVHYAHVVEE 178
+++G L I ++N ++ + + G L +PL C+C D+ A V + V E
Sbjct: 440 GSVYGGLTTADWIRDSNGMAEEEDAALDAGTTLFVPLHCACFGGADSGAPAVFLTYPVAE 499
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVAN 238
G + IA++F T + LM +N + + + AG+ + VPL AC SS A + D L VAN
Sbjct: 500 GDTVPAIARRFRTTGNDLMSVNDLAT-ADVAAGDIIVVPLPACASSFPAFASDAGLAVAN 558
Query: 239 GTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT- 297
GTY TAN CV+C C N L C P+ S TC SM C +S S+ +GN T
Sbjct: 559 GTYAVTANRCVQCSC-GPGNLDLFCVPAPLADS-------TCSSMQCSNS-SMMLGNFTL 609
Query: 298 --TSNNCNRTTCEYAGYNNLSILTTLNS 323
TS C+ T+C Y GY N +IL TL +
Sbjct: 610 LMTSAGCSVTSCSYGGYANGTILATLTT 637
>gi|195612126|gb|ACG27893.1| erwinia induced protein 1 [Zea mays]
Length = 412
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 169/337 (50%), Gaps = 25/337 (7%)
Query: 5 QLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNL 64
+L L +LL + + LS + C++ +A C AL+ Y ++E+ +LF L
Sbjct: 13 RLALFVLLLSGSGVPTALSKSTLESCASSSA--CPALLSYTLYADLKLAELAALFAADPL 70
Query: 65 RSILGAN--NFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+IL AN +F P + +PA ++VP+ C CS+G + Y + D L +A
Sbjct: 71 -AILAANAMDFAVPDPGDRILPAGLALRVPVPCACSDGIRKATSA-RYVARAGDTLASVA 128
Query: 123 RTIFGQLLKYQKIVEANNISNPD--LIQIGQNLTIPLPCSC-DDVDN-AKVVHYAHVVEE 178
+++G L I ++N ++ + + G L +PL +C D+ A V + V E
Sbjct: 129 GSVYGGLTTADWIRDSNGMAEEEDAALDAGTTLFVPLHXACFGGADSGAPAVFLTYPVAE 188
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVAN 238
G + IA++F T + LM +N + + + AG+ + VPL AC SS A + D L VAN
Sbjct: 189 GDTVPAIARRFRTTGNDLMSVNDLAT-ADVAAGDIIVVPLPACASSFPAFASDAGLAVAN 247
Query: 239 GTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT- 297
GTY TAN CV+C C N L C P+ S TC SM C +S S+ +GN T
Sbjct: 248 GTYAVTANRCVQCSC-GPGNLDLFCVPAPLADS-------TCSSMQCSNS-SMMLGNFTL 298
Query: 298 --TSNNCNRTTCEYAGYNNLSILTTLNS--LSTCPSP 330
TS C+ T+C Y GY N +IL TL + CP P
Sbjct: 299 LMTSAGCSVTSCSYGGYANGTILATLTTSLKPQCPGP 335
>gi|218191645|gb|EEC74072.1| hypothetical protein OsI_09086 [Oryza sativa Indica Group]
Length = 437
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 151/306 (49%), Gaps = 27/306 (8%)
Query: 38 CQALVGYLPPNKTTISEIQSLF-TVKNLRSILGANNF-PPGTPRNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ +LF T A +F PG +P ++VP C
Sbjct: 42 CSALLGYTLYADMKVSEVAALFGTDPAALLAANALDFGAPGAAHRI-LPMGLFVRVPTRC 100
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPDL-IQIGQN 152
C++G S V Y + D L +A +F L +I AN ++ +PD + GQ
Sbjct: 101 SCTDGVRKSVSV-RYAARPADTLATVADGVFAGLASADQIRNANALASADPDTPLDPGQK 159
Query: 153 LTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
L +PLPC C +N V+ ++VV+ G + IA + T +M +N + S + A
Sbjct: 160 LVVPLPCVCFNSSDNNLPAVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAM--GSPIAA 217
Query: 211 -GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQ 269
G+ L +PL AC S+ + D+ L VANGTY TA +CV+C C N L C P+
Sbjct: 218 PGDILAIPLPACTSAFPKSASDHGLIVANGTYALTAGNCVQCSC-GPGNLNLYCTPA--- 273
Query: 270 PSSPNSRWKTCPSMLCGDSESLSIGNT---TTSNNCNRTTCEYAGYNNLSILTTLNS--L 324
S +CPSM C +S L +GN +TS CN ++C Y G+ N +I T L++
Sbjct: 274 -----SLTGSCPSMQCSNSNVL-LGNVSARSTSAGCNVSSCSYGGFVNGTITTLLSTGLQ 327
Query: 325 STCPSP 330
S CP P
Sbjct: 328 SKCPGP 333
>gi|326505886|dbj|BAJ91182.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 424
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 147/307 (47%), Gaps = 29/307 (9%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNF---PPGTPRNFSVPAQKPIKVPIH 94
C AL+GY +SE+ +LF ++L AN PG +P ++VP
Sbjct: 38 CPALLGYTLYADMKVSEVAALFATAP-SALLAANALDFAAPGAAHRI-LPMGLFLRVPTR 95
Query: 95 CICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQI---GQ 151
C C++G S V Y + D L +A +F L +I AN +++ D GQ
Sbjct: 96 CACADGVRKSVAV-RYAARPADTLATVADVVFAGLASADQIRGANGLADADADAPLDAGQ 154
Query: 152 NLTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI 209
L +PLPC C N V+ ++VV+ G + IA + T +M +N + S +
Sbjct: 155 PLVVPLPCVCFNSSDSNLPAVYLSYVVQVGDTVPAIAAAYETTVTDVMNVNAM--GSPVA 212
Query: 210 A-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQF 268
A G+ L +PL AC SS + D+ L VANGTY TA +CV+C C N L C P+
Sbjct: 213 APGDILAIPLPACASSFPKTASDHGLLVANGTYALTAGNCVQCSC-GPGNLNLYCTPASL 271
Query: 269 QPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS-- 323
+CPS C +S L +GN + TS CN ++C Y G+ N +I T LN+
Sbjct: 272 S--------GSCPSTQCSNSNVL-LGNASTHATSAGCNVSSCSYGGFVNGTITTLLNTGL 322
Query: 324 LSTCPSP 330
TCP P
Sbjct: 323 QPTCPGP 329
>gi|226507308|ref|NP_001150175.1| erwinia induced protein 1 precursor [Zea mays]
gi|195637310|gb|ACG38123.1| erwinia induced protein 1 [Zea mays]
Length = 406
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 157/314 (50%), Gaps = 29/314 (9%)
Query: 30 CSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQK 87
CS A C AL+GY +SE+ +LF + ++L AN +P N +PA
Sbjct: 30 CSGADA--CPALLGYKLYADMKVSEVAALFG-ADPAAVLAANALDFASPGAANRILPAGT 86
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPD 145
P++VP C C++G S + Y + D L I+ +F L +I AN ++ +PD
Sbjct: 87 PLRVPTRCACADGVRKSVAI-RYAARPSDTLGSISEVVFAGLPSADQIRTANGLAAEDPD 145
Query: 146 L-IQIGQNLTIPLPCSCDDV--DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
+ GQ L IPLPC C + +N V+ ++VV+ G + IA T + +N +
Sbjct: 146 APLNPGQELVIPLPCVCFNSTDNNLPAVYLSYVVQVGDTVESIAASHTTTVTDISNVNAM 205
Query: 203 HDDSKLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTL 261
S ++A G+ L +PL AC S+ + D L VANGTY TA +CV+C C N L
Sbjct: 206 --GSPIVAPGDILAIPLSACASAFPNSASDYGLLVANGTYALTAGNCVECSCGPA-NLNL 262
Query: 262 QCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSIL 318
C PS +C SM C +S SL +GN T T+ C+ ++C Y GY N +I
Sbjct: 263 YCMPSSLS--------ASCSSMQCSNS-SLILGNVTAQPTTGGCSVSSCNYGGYVNGTIA 313
Query: 319 TTLNS--LSTCPSP 330
T+L+S CP P
Sbjct: 314 TSLSSGLQPMCPGP 327
>gi|356550857|ref|XP_003543799.1| PREDICTED: LOW QUALITY PROTEIN: lysM domain-containing GPI-anchored
protein 1-like [Glycine max]
Length = 404
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 155/293 (52%), Gaps = 21/293 (7%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHC 95
C AL+GY SE+ SLF + + ++L AN P + +P++ +KVPI
Sbjct: 16 CNALLGYTLYTDLKASEVASLFQIDPI-ALLTANAIDISYPDVEHHILPSKLFLKVPITR 74
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISN-PDLIQIGQNLT 154
C +G S Y + D L IA +I+G L+ ++ EAN+I + P ++ +G NL
Sbjct: 75 SCVDGIRKSMST-HYRTRPSDTLSSIANSIYGGLVSPDQLREANSIGDDPSVLDVGLNLV 133
Query: 155 IPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGE 212
+PLPC+C ++ DN+ ++ ++VV+ + A IA ++ T LM +N + + + G+
Sbjct: 134 VPLPCTCFNESDNSLPSIYLSYVVQPIDTLAAIAARYFTTFTDLMNVNDM-GTTAISDGD 192
Query: 213 PLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSS 272
L VP+ AC S+ + D L V NG+YT TA CV+C C + L C PS S
Sbjct: 193 ILVVPIPACASNFPKYASDYGLLVPNGSYTITAGHCVQCSC-GPQDLNLYCMPSSLAVS- 250
Query: 273 PNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLN 322
C SM C +S L +GN T +S+ CN T+C Y G+ + + +T+L+
Sbjct: 251 -------CSSMRCKNSN-LMLGNVTVQRSSSGCNVTSCNYDGFVSGTTITSLS 295
>gi|413944030|gb|AFW76679.1| erwinia induced protein 1 [Zea mays]
Length = 406
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 159/314 (50%), Gaps = 29/314 (9%)
Query: 30 CSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQK 87
CS A C AL+GY +SE+ +LF + ++L AN +P N +PA
Sbjct: 30 CSGADA--CPALLGYKLYADMKVSEVAALFG-ADPAAVLAANALDFASPGAANRILPAGT 86
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPD 145
P++VP C C++G S + Y + D L I+ +F L +I AN ++ +PD
Sbjct: 87 PLRVPTRCACADGVRKSVAI-RYAARPSDTLGSISEVVFAGLPSADQIRTANGLAAEDPD 145
Query: 146 L-IQIGQNLTIPLPCSCDDV--DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
+ GQ L IPLPC C + +N V+ ++VV+ G + IA T + +N +
Sbjct: 146 APLNPGQELVIPLPCVCFNSTDNNLPAVYLSYVVQVGDTVESIAASHTTTVTDISNVNAM 205
Query: 203 HDDSKLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTL 261
S ++A G+ L +PL AC S+ + D L VANGTY TA +CV+C C N L
Sbjct: 206 --GSPIVAPGDILAIPLSACASAFPNSASDYGLLVANGTYALTAGNCVECSCGPA-NLNL 262
Query: 262 QCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSIL 318
C +P+S +C SM C +S SL +GN T T+ C+ ++C Y GY N +I
Sbjct: 263 YC--------TPSSLSASCSSMQCSNS-SLILGNVTAQPTTGGCSVSSCNYDGYVNGTIA 313
Query: 319 TTLNS--LSTCPSP 330
T+L+S CP P
Sbjct: 314 TSLSSGLQPMCPGP 327
>gi|219888165|gb|ACL54457.1| unknown [Zea mays]
Length = 406
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 159/315 (50%), Gaps = 29/315 (9%)
Query: 29 KCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQ 86
CS A C AL+GY +SE+ +LF + ++L AN +P N +PA
Sbjct: 29 PCSGADA--CPALLGYKLYADMKVSEVAALFG-ADPAAVLAANALDFASPGAANRILPAG 85
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NP 144
P++VP C C++G S + Y + D L I+ +F L +I AN ++ +P
Sbjct: 86 TPLRVPTRCACADGVRKSVAI-RYAARPSDTLGSISEVVFAGLPSADQIRTANGLAAEDP 144
Query: 145 DL-IQIGQNLTIPLPCSCDDV--DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
D + GQ L IPLPC C + +N V+ ++VV+ G + IA T + +N
Sbjct: 145 DAPLNPGQELVIPLPCVCFNPTDNNLPAVYLSYVVQVGDTVESIAASHTTTVTDISNVNA 204
Query: 202 IHDDSKLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWT 260
+ S ++A G+ L +PL AC S+ + D L VANGTY TA +CV+C C N
Sbjct: 205 M--GSPIVAPGDILAIPLSACASAFPNSASDYGLLVANGTYALTAGNCVECSCGPA-NLN 261
Query: 261 LQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSI 317
L C +P+S +C SM C +S SL +GN T T+ C+ ++C Y GY N +I
Sbjct: 262 LYC--------TPSSLSASCSSMQCSNS-SLILGNVTAQPTTGGCSVSSCNYDGYVNGTI 312
Query: 318 LTTLNS--LSTCPSP 330
T+L+S CP P
Sbjct: 313 ATSLSSGLQPMCPGP 327
>gi|12323377|gb|AAG51658.1|AC010704_2 unknown protein; 84247-85908 [Arabidopsis thaliana]
Length = 409
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 170/340 (50%), Gaps = 36/340 (10%)
Query: 7 KLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRS 66
K +LL + ++L++++TA+ + C +L+GY ++E+ SLF V + S
Sbjct: 6 KPLLLFLILASSLASMATAKSTIEPCSSKDTCNSLLGYTLYTDLKVTEVASLFQVDPV-S 64
Query: 67 ILGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
+L +N+ P N +PA+ +K+PI C C +G S Y + D L IA +
Sbjct: 65 MLLSNSIDISYPDVENHVLPAKLFLKIPITCSCVDGIRKSLST-HYKTRTSDTLGSIADS 123
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSF 182
++G L+ ++I AN+ ++ ++ +G L IPLPC+C + D + ++ ++VV +
Sbjct: 124 VYGGLVSPEQIQVANSETDLSVLDVGTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTM 183
Query: 183 ALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYT 242
A IA++F T L +N + + G+ L VPL AC+S+ + D L + NG+Y
Sbjct: 184 AGIAKRFSTSVTDLTNVNAM-GAPDINPGDILAVPLLACSSNFPKYATDYGLIIPNGSYA 242
Query: 243 FTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TS 299
TA CV+C C + +++C+ S F +GN T +S
Sbjct: 243 LTAGHCVQCSC-VLGSRSMRCRNSNFM-----------------------LGNITSQQSS 278
Query: 300 NNCNRTTCEYAGYNNLSILTTLN-SLS-TCPSPSNNASRI 337
+ C TTC Y G+ + +ILTTL+ SL CP P A I
Sbjct: 279 SGCKLTTCSYNGFASGTILTTLSMSLQPRCPGPQQLAPLI 318
>gi|357143754|ref|XP_003573038.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
[Brachypodium distachyon]
Length = 556
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 151/319 (47%), Gaps = 34/319 (10%)
Query: 30 CSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQK 87
CS A CQAL+GY +SE+ +LF + ++L AN G P + +P
Sbjct: 155 CSGSDA--CQALLGYTLYADMKVSEVAALFGGVDPAALLAANALDFGAPGAAHRILPMGL 212
Query: 88 PIKVPIHCICSNGT--GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--- 142
++VP C CS+G VS + Y + D L +A +F L +I +AN +
Sbjct: 213 FLRVPARCACSDGVRKSVSTR---YAARPGDTLAAVADVVFAGLASADQIRDANGLGASG 269
Query: 143 ----NPDLIQIGQNLTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTL 196
N + GQ L +PLPC C + N V+ ++VV+ G + +A + T +
Sbjct: 270 DADPNDAPLDAGQKLVVPLPCVCFNNSDSNLPAVYLSYVVQVGDTVPAVAASYETTVTDI 329
Query: 197 MKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDAT 256
M +N + G+ L +PL AC S+ + D+ L VANGTY TA +CV+C C
Sbjct: 330 MNVNAM-GGPVAAPGDILAIPLPACASTFPKSASDHGLLVANGTYALTAGNCVQCSC-GP 387
Query: 257 NNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYN 313
N L C P+ +CPS C +S L +GN + TS CN ++C Y G+
Sbjct: 388 GNLDLYCTPASLS--------GSCPSTQCSNSNVL-LGNVSTHATSAGCNVSSCGYGGFI 438
Query: 314 NLSILTTLNS--LSTCPSP 330
N +I T LN+ CP P
Sbjct: 439 NGTITTLLNTGLQPKCPGP 457
>gi|226532846|ref|NP_001150342.1| erwinia induced protein 1 precursor [Zea mays]
gi|195638552|gb|ACG38744.1| erwinia induced protein 1 [Zea mays]
Length = 424
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 148/310 (47%), Gaps = 35/310 (11%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSI------LGANNFPPGTPRNFSVPAQKPIKV 91
C AL+GY +SE+ +LF V + GA PG +P ++V
Sbjct: 40 CPALLGYTLYADMKVSEVAALFAVDPAALLAANALDFGA----PGAAHRI-LPMGLFVRV 94
Query: 92 PIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI--SNPDL-IQ 148
P C C++G S V Y + D L ++ +F L +I N + ++PD +
Sbjct: 95 PTRCSCADGVRKSVSV-RYAARPADTLATVSDVVFAGLASSDQIRNENGLTSADPDAPLD 153
Query: 149 IGQNLTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
GQ L IPLPC C +N V+ ++VV+ G + IA + T +M +N + S
Sbjct: 154 AGQKLAIPLPCVCFNSSDNNLPAVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAM--GS 211
Query: 207 KLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKP 265
+ A G+ L +PL AC S+ + D+ L VANGTY TA++CV+C C + L C P
Sbjct: 212 PVAAPGDILAIPLPACASTFPKSASDHGLIVANGTYALTASNCVQCSC-GPGSLNLYCTP 270
Query: 266 SQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLN 322
+ TCPSM C +S+ + +GN + T CN + C Y G+ N +I +L
Sbjct: 271 TSLS--------GTCPSMQCPNSDVM-LGNVSTHPTGAGCNVSACSYGGFVNGTITASLT 321
Query: 323 S--LSTCPSP 330
+ + CP P
Sbjct: 322 AGLQARCPGP 331
>gi|302768741|ref|XP_002967790.1| hypothetical protein SELMODRAFT_65369 [Selaginella moellendorffii]
gi|300164528|gb|EFJ31137.1| hypothetical protein SELMODRAFT_65369 [Selaginella moellendorffii]
Length = 298
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 141/299 (47%), Gaps = 32/299 (10%)
Query: 29 KCSAQTAARCQALVGYLPPNK--TTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQ 86
C A CQAL+ Y ++ TI+ I SLF++ +++IL AN F P + +
Sbjct: 24 SCRATVDPPCQALLAYRSSSQFSPTIANISSLFSIP-VQAILAANAFSPSDDPSSRLSTG 82
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
+ +++P+ C C+ G YT+ D L IA +G L+ Q+I AN + + D
Sbjct: 83 ETLRIPVPCSCA-ANGQRSGNTTYTIAPGDFLFQIANNRYGGLVTIQEIAAANGVVDLDK 141
Query: 147 IQIGQNLTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD 204
I GQNLTIP PCSC + + A+V+++G S + + ++ +LN +
Sbjct: 142 ILAGQNLTIPYPCSCRGNSFGGRDALFMAYVIQDGESREGFYRSYNLSQEEFDRLNPSVN 201
Query: 205 DSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCK 264
L+ AC + + D+ L VA+G Y TAN CV+C CD T
Sbjct: 202 LDDLVV-----CMCVACRARFNRSALDSNLTVASGGYAITANGCVQCNCDGTE------- 249
Query: 265 PSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNN----CNRTTCEYAGYNNLSILT 319
P++P + C S+ C +S L IGN +T N C +C Y GYNN I T
Sbjct: 250 ----APTAP----RNC-SLGCRNSR-LQIGNFSTGANSSGGCTIESCLYDGYNNRQIFT 298
>gi|293337038|ref|NP_001169903.1| uncharacterized protein LOC100383798 precursor [Zea mays]
gi|224032255|gb|ACN35203.1| unknown [Zea mays]
gi|413939092|gb|AFW73643.1| erwinia induced protein 1 [Zea mays]
Length = 429
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 148/310 (47%), Gaps = 35/310 (11%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSI------LGANNFPPGTPRNFSVPAQKPIKV 91
C AL+GY +SE+ +LF V + GA PG +P ++V
Sbjct: 45 CPALLGYTLYADMKVSEVAALFAVDPAALLAANALDFGA----PGAAHRI-LPMGLFVRV 99
Query: 92 PIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI--SNPDL-IQ 148
P C C++G S V Y + D L ++ +F L +I N + ++PD +
Sbjct: 100 PTRCSCADGVRKSVSV-RYAARPADTLATVSDVVFAGLASSDQIRNENGLTSADPDAPLD 158
Query: 149 IGQNLTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
GQ L IPLPC C +N V+ ++VV+ G + IA + T +M +N + S
Sbjct: 159 AGQKLAIPLPCVCFNSSDNNLPAVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAM--GS 216
Query: 207 KLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKP 265
+ A G+ L +PL AC S+ + D+ L V+NGTY TA++CV+C C + L C P
Sbjct: 217 PVAAPGDILAIPLPACASTFPKSASDHGLIVSNGTYALTASNCVQCSC-GPGSLNLYCTP 275
Query: 266 SQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLN 322
+ TCPSM C +S+ + +GN + T CN + C Y G+ N +I +L
Sbjct: 276 TSLS--------GTCPSMQCPNSDVM-LGNVSTHPTGAGCNVSACSYGGFVNGTITASLT 326
Query: 323 S--LSTCPSP 330
+ + CP P
Sbjct: 327 AGLQARCPGP 336
>gi|242066660|ref|XP_002454619.1| hypothetical protein SORBIDRAFT_04g034400 [Sorghum bicolor]
gi|241934450|gb|EES07595.1| hypothetical protein SORBIDRAFT_04g034400 [Sorghum bicolor]
Length = 429
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 24/253 (9%)
Query: 89 IKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPDL 146
++VP C C++G S V Y + D L +A +F L +I N ++ +PD
Sbjct: 97 VRVPTRCSCTDGVRKSVSV-RYAARPADTLATVADVVFAGLASSDQIRNENGLTSTDPDA 155
Query: 147 -IQIGQNLTIPLPCSCDDVD--NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIH 203
+ GQ L +PLPC C + N V+ ++VV+ G + IA + T +M +N +
Sbjct: 156 PLDAGQKLVVPLPCVCFNSSDYNLPAVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAM- 214
Query: 204 DDSKLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQ 262
S + A G+ L +PL AC S+ + D+ L VANGTY TA++CV+C C + L
Sbjct: 215 -GSPVAAPGDILAIPLPACASTFPKSASDHGLIVANGTYALTASNCVQCSC-GPGSLNLY 272
Query: 263 CKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILT 319
C P+ +CPSM C +S + +GN + TS CN +TC Y G+ N +I
Sbjct: 273 CTPTSLS--------GSCPSMQCPNSNVM-LGNVSTHPTSAGCNVSTCSYGGFVNGTITA 323
Query: 320 TLNS--LSTCPSP 330
+LN+ CP+P
Sbjct: 324 SLNAGLQPKCPAP 336
>gi|222623738|gb|EEE57870.1| hypothetical protein OsJ_08523 [Oryza sativa Japonica Group]
Length = 342
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 118/231 (51%), Gaps = 23/231 (9%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPDL-IQIGQNLTIPLPCSC--DDVD 165
T++ G D + + L KI AN ++ +PD + GQ L +PLPC C +
Sbjct: 32 TIEPCTGSDSCSALLGYTLYADMKIRNANAVASADPDAPLDPGQKLVVPLPCVCFNSSDN 91
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA-GEPLDVPLKACNSS 224
N V+ ++VV+ G + IA + T +M +N + S + A G+ L +PL AC S+
Sbjct: 92 NLPAVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAM--GSPIAAPGDILAIPLPACTSA 149
Query: 225 IKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSML 284
+ D+ L VANGTY TA +CV+C C N L C P+ S +CPSM
Sbjct: 150 FPKSASDHGLIVANGTYALTAGNCVQCSC-GPGNLNLYCTPA--------SLTGSCPSMQ 200
Query: 285 CGDSESLSIGNT---TTSNNCNRTTCEYAGYNNLSILTTLNS--LSTCPSP 330
C +S L +GN +TS CN ++C Y G+ N +I T L++ S CP P
Sbjct: 201 CSNSNVL-LGNVSARSTSAGCNVSSCSYGGFVNGTITTLLSTGLQSRCPGP 250
>gi|259490474|ref|NP_001159028.1| erwinia induced protein 1 precursor [Zea mays]
gi|195641026|gb|ACG39981.1| erwinia induced protein 1 [Zea mays]
Length = 426
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 135/305 (44%), Gaps = 25/305 (8%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTV-KNLRSILGANNFPPGTPRNFS--VPAQKPIKVPIH 94
C AL+GY +SE+ +LF+V A +F G P + +P ++VP
Sbjct: 42 CPALLGYTLYADMKVSEVAALFSVDPAALLAANALDF--GAPGCGARILPMGLFVRVPTR 99
Query: 95 CICSNGTG-VSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL-IQIGQN 152
C C++G+ S + + A+ +PD + GQ
Sbjct: 100 CSCADGSASPSPSATPRARPXRSPPSPXSSSXGSPPPTRSATRTASPTXDPDAPLDAGQK 159
Query: 153 LTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
L IPLPC C +N V+ ++VV+ G + IA + T +M +N +
Sbjct: 160 LAIPLPCVCFNSSDNNLPAVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAMGSPVA-AP 218
Query: 211 GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
G+ L +PL AC S+ + D+ L VANGTY TA++CV+C C + L C P+
Sbjct: 219 GDILAIPLPACASAFPKSASDHGLIVANGTYALTASNCVQCSC-GPGSLNLYCTPTSLS- 276
Query: 271 SSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS--LS 325
TCPSM C +S + +GN + T CN + C Y G+ N +I +L +
Sbjct: 277 -------GTCPSMQCPNSNVM-LGNVSTHPTGAGCNVSACSYGGFVNGTITASLTGGLQA 328
Query: 326 TCPSP 330
CP P
Sbjct: 329 RCPGP 333
>gi|224084868|ref|XP_002307430.1| predicted protein [Populus trichocarpa]
gi|222856879|gb|EEE94426.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 116/217 (53%), Gaps = 11/217 (5%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLR 65
+ +L+ V A ++ ST + CS + C AL+ Y +SE+ SLF + +
Sbjct: 7 ITFILIFVNVVALVTPKSTIE--PCS--NSDSCNALLAYTLYTDLKVSEVASLFQIDPV- 61
Query: 66 SILGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
++L AN P N +P+Q +K+PI C C +G S Y + D L IA
Sbjct: 62 ALLTANAIDISYPDVENHILPSQLFLKIPITCSCVDGIRKSVSTH-YKTRPSDTLSTIAD 120
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSS 181
+I+ L+ +I EAN+I +P ++ +GQ+L +PLPC+C + DN+ ++ ++VV+E +
Sbjct: 121 SIYAGLVSADQIKEANSIDDPSVLDVGQSLVVPLPCTCFNGTDNSLPAIYLSYVVKEVDT 180
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
A IA ++ T LM +N + ++AG+ L VPL
Sbjct: 181 LAAIAARYATTLTDLMNVNAMG-SVAIMAGDILAVPL 216
>gi|222635170|gb|EEE65302.1| hypothetical protein OsJ_20541 [Oryza sativa Japonica Group]
Length = 332
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 134/299 (44%), Gaps = 67/299 (22%)
Query: 52 ISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQK---PIKV------PIHCICSNGTG 102
+SE+ +LF + R++L AN +F+ P ++ P +V P C CS+G
Sbjct: 3 VSEVAALFGA-DPRAVLAANAL------DFAFPGRRQPHPPRVGSRSASPPRCACSDG-- 53
Query: 103 VSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPDL-IQIGQNLTIPLPC 159
+ K I AN +S +PD + G L +PLPC
Sbjct: 54 --------------------------VRKSVAIRTANGLSAEDPDAPLDAGATLVVPLPC 87
Query: 160 SC-DDVD-NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA-GEPLDV 216
+C + D N V+ G++ IA T + +N + S ++A G+ L +
Sbjct: 88 ACFNSTDYNLPAVYSPMSCGSGTTVQSIAATHATTVTDISNVNAM--GSPIVAPGDILAI 145
Query: 217 PLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSR 276
PL AC S + D L VANGTY TA +CV+C C + L C P+ S
Sbjct: 146 PLPACASMFPNSASDYGLLVANGTYALTAGNCVQCSC-GPGDLKLYCTPA--------SL 196
Query: 277 WKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAGYNNLSILTTLNS--LSTCPSP 330
+C SM C +S L +GN T TS CN ++C YAG N +I T+L+S TCP P
Sbjct: 197 TASCSSMQCPNSN-LMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSLSSGLQPTCPGP 254
>gi|388500350|gb|AFK38241.1| unknown [Lotus japonicus]
Length = 226
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSI 67
LV LL +V + ST + CS+ C +L+ Y+ P + +SEI + F+V N+ +I
Sbjct: 13 LVFLLLSVSYQVEAKSTIE--PCSS--GFPCPSLLSYILPWDSKLSEIATRFSV-NVSNI 67
Query: 68 LGANNFPPGTPRNFS--VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTI 125
L AN+ P TP + + A+ +K+P C C +G S +Y V+ D L I+
Sbjct: 68 LAANSVFPITPSSGHQILSAKSIVKIPFSCPCVDGIRRSIST-IYNVEASDTLASISEG- 125
Query: 126 FGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNAK-VVHYAHVVEEGSSFA 183
+G L+ ++I N+I+ + + G ++ IPLPC C ++V+N V+ ++VV++G S
Sbjct: 126 YGGLVGAEQIKTMNSINETNPLTYGSSIVIPLPCKCLNNVNNGDTTVYMSYVVQKGQSLG 185
Query: 184 LIAQKFGTDRDTLMKLNGI 202
IA +GT L +NG+
Sbjct: 186 SIATMYGTTVSDLESVNGL 204
>gi|224111082|ref|XP_002315740.1| predicted protein [Populus trichocarpa]
gi|222864780|gb|EEF01911.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 4 FQLKLVLLLFTVCAALSTLSTAQDFKCSA-QTAARCQALVGY--LPPNKTTISEIQSLFT 60
F L + T+ L + Q F C+A Q++ CQ Y PN +S I LF+
Sbjct: 9 FSLLFFIYYSTILHHLQAQPSTQGFTCTANQSSFPCQTYAFYRATAPNFLDLSSIGDLFS 68
Query: 61 VKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICS--NGTGVSDKVPVYTVKKDDGL 118
V L +N P +P +P Q P+ VP+ C C+ NGT +S YT+K +D
Sbjct: 69 VSRLMISKPSNISSPASPL---IPNQ-PLFVPLSCSCNTMNGTSISFANITYTIKPNDTF 124
Query: 119 DFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDD---VDNAKVVHYAHV 175
++ FG L YQ + N P L+QIG + P+ C C + + N ++V
Sbjct: 125 YLVSTEYFGNLTTYQSVQLVNPTLIPTLLQIGVEVIFPIFCKCPNQTQLQNKVNYLVSYV 184
Query: 176 VEEGSSFALIAQKFGTDRDTLMKLNG 201
+ + + +A FG + +++ NG
Sbjct: 185 FQPSDNLSSVASTFGVETQSIVDANG 210
>gi|306020741|gb|ADM79424.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020743|gb|ADM79425.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020753|gb|ADM79430.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020765|gb|ADM79436.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020771|gb|ADM79439.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020773|gb|ADM79440.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020775|gb|ADM79441.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020793|gb|ADM79450.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020795|gb|ADM79451.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020797|gb|ADM79452.1| LysM domain-containing protein-like protein [Picea sitchensis]
Length = 151
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 76/140 (54%), Gaps = 18/140 (12%)
Query: 196 LMKLNGIHDDSKLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCD 254
LM +N + S LIA G+ L VPL AC+S+I S D L VANG+Y TA+ C++C C
Sbjct: 7 LMSVNSL--GSSLIAPGDILAVPLSACSSNISNKSADRNLLVANGSYAITASHCLQCSC- 63
Query: 255 ATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAG 311
+ L C P+ S C SM C +S L +GN T TS CN T C Y G
Sbjct: 64 GPRDLDLYCAPAPLAAS--------CSSMQCKNSN-LMVGNVTAQQTSGGCNVTKCLYNG 114
Query: 312 YNNLSILTTL-NSLS-TCPS 329
Y N +ILT L NSL CP+
Sbjct: 115 YVNNTILTLLENSLQPQCPA 134
>gi|306020737|gb|ADM79422.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020739|gb|ADM79423.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020745|gb|ADM79426.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020747|gb|ADM79427.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020749|gb|ADM79428.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020751|gb|ADM79429.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020755|gb|ADM79431.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020757|gb|ADM79432.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020759|gb|ADM79433.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020761|gb|ADM79434.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020763|gb|ADM79435.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020767|gb|ADM79437.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020769|gb|ADM79438.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020777|gb|ADM79442.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020779|gb|ADM79443.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020781|gb|ADM79444.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020783|gb|ADM79445.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020789|gb|ADM79448.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020791|gb|ADM79449.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020799|gb|ADM79453.1| LysM domain-containing protein-like protein [Picea sitchensis]
Length = 151
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 76/140 (54%), Gaps = 18/140 (12%)
Query: 196 LMKLNGIHDDSKLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCD 254
LM +N + S LIA G+ L VPL AC+S+I S D L VANG+Y TA+ C++C C
Sbjct: 7 LMSVNSL--GSSLIAPGDILAVPLSACSSNISNKSADRNLLVANGSYAITASHCLQCSC- 63
Query: 255 ATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAG 311
+ L C P+ S C SM C +S L +GN T TS CN T C Y G
Sbjct: 64 GPRDLDLYCAPAPLAAS--------CSSMQCKNSN-LMVGNVTAQQTSGGCNVTKCLYNG 114
Query: 312 YNNLSILTTL-NSLS-TCPS 329
Y N +ILT L NSL CP+
Sbjct: 115 YVNNTILTLLENSLQPQCPA 134
>gi|413944031|gb|AFW76680.1| hypothetical protein ZEAMMB73_461578 [Zea mays]
Length = 246
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 30 CSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTP--RNFSVPAQK 87
CS A C AL+GY +SE+ +LF + ++L AN +P N +PA
Sbjct: 30 CSGADA--CPALLGYKLYADMKVSEVAALFGA-DPAAVLAANALDFASPGAANRILPAGT 86
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPD 145
P++VP C C++G S + Y + D L I+ +F L +I AN ++ +PD
Sbjct: 87 PLRVPTRCACADGVRKSVAI-RYAARPSDTLGSISEVVFAGLPSADQIRTANGLAAEDPD 145
Query: 146 L-IQIGQNLTIPLPCSCDDV--DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
+ GQ L IPLPC C + +N V+ ++VV+ G + IA T + +N +
Sbjct: 146 APLNPGQELVIPLPCVCFNSTDNNLPAVYLSYVVQVGDTVESIAASHTTTVTDISNVNAM 205
Query: 203 HDDSKLIA-GEPLDVPLKACNSSI 225
S ++A G+ L +PL S I
Sbjct: 206 --GSPIVAPGDILAIPLSGKQSLI 227
>gi|356547173|ref|XP_003541991.1| PREDICTED: LOW QUALITY PROTEIN: lysM domain-containing GPI-anchored
protein 1-like [Glycine max]
Length = 174
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 12/168 (7%)
Query: 57 SLFTVKNLRSILGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTG--VSDKVPVYTV 112
SLF + NL ++L AN P + +P++ +KVPI C C + V+ + Y
Sbjct: 10 SLFQI-NLIALLTANAIDISYPDVEHHILPSKLFLKVPISCSCVDNIRKFVATQ---YKT 65
Query: 113 KKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVV 170
+ D L IA ++ L+ ++ EAN+IS+P ++ +GQNL +PLPC+C + DN+ +
Sbjct: 66 RPSDTLXDIADAVYAGLVSSNQLHEANSISDPSILDVGQNLVVPLPCTCFNGSDNSLPAI 125
Query: 171 HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ ++VV ++ +A ++ T LM +N + S I G+ L VP+
Sbjct: 126 YLSYVVRLVNTLTAVAARYFTTLTDLMNVNAM--GSIAINGDILGVPI 171
>gi|356544876|ref|XP_003540873.1| PREDICTED: LOW QUALITY PROTEIN: lysM domain-containing GPI-anchored
protein 1-like [Glycine max]
Length = 208
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 6/161 (3%)
Query: 57 SLFTVKNLRSILG-ANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV-YTVKK 114
SLF + + + ANN + +P++ +KVPI C C NG + V Y +
Sbjct: 48 SLFQIDPIALLTANANNISYPNVEHHILPSKLFLKVPISCSCVNG--IRKFVATHYKTRP 105
Query: 115 DDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHY 172
D L FI + L+ ++ EAN+I +P ++ +GQNL IPLPC+C + DN+ ++
Sbjct: 106 SDTLXFITDVAYAGLVSSDQLREANSIFDPSVLDVGQNLVIPLPCTCFNSSDNSLPAIYL 165
Query: 173 AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
++VV + A IA ++ T M I+DD L P
Sbjct: 166 SYVVRLVDTLAAIAARYFTMNVNAMGSTAINDDDILTVPIP 206
>gi|306020785|gb|ADM79446.1| LysM domain-containing protein-like protein [Picea sitchensis]
gi|306020787|gb|ADM79447.1| LysM domain-containing protein-like protein [Picea sitchensis]
Length = 151
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 75/140 (53%), Gaps = 18/140 (12%)
Query: 196 LMKLNGIHDDSKLIA-GEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCD 254
LM +N + S LIA G+ L VPL AC+S+I S D L VAN +Y TA+ C++C C
Sbjct: 7 LMSVNSL--GSSLIAPGDILAVPLSACSSNISNKSADRNLLVANWSYAITASHCLQCSC- 63
Query: 255 ATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSNNCNRTTCEYAG 311
+ L C P+ S C SM C +S L +GN T TS CN T C Y G
Sbjct: 64 GPRDLDLYCAPAPLAAS--------CSSMQCKNSN-LMVGNVTAQQTSGGCNVTKCLYNG 114
Query: 312 YNNLSILTTL-NSLS-TCPS 329
Y N +ILT L NSL CP+
Sbjct: 115 YVNNTILTLLENSLQPQCPA 134
>gi|147767409|emb|CAN77911.1| hypothetical protein VITISV_014762 [Vitis vinifera]
Length = 211
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFS--VPAQKPIKVPIHC 95
C +L+ YL P + +SEI S F V N+ IL N+ P P + S +PA+ +KVPI C
Sbjct: 43 CNSLLSYLLPWDSKLSEIASRFQV-NISDILAXNSMDPTRPSSASQIIPAKSLVKVPILC 101
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C +G S YT +G L+ +I N GQ+L I
Sbjct: 102 PCVDGIRRSLST-TYTRG------------YGGLVSADQIRSVNGGKGAGY---GQSLVI 145
Query: 156 PLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
PLPC+C + + A V+ ++VV+ G S I ++ T L +NG+
Sbjct: 146 PLPCTCFGNTNNGATAVYMSYVVQRGESLGSIGARYRTTVTDLAAVNGL 194
>gi|297734200|emb|CBI15447.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 173 AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDN 232
++VV+ G S I ++ T L +NG+ + G+ L +P+ AC SS ++
Sbjct: 2 SYVVQRGESLGSIGARYHTTVTDLAAVNGL-GQPVINPGDILAIPIPAC-SSANLRWYNE 59
Query: 233 YLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLS 292
L VANG+Y TAN+C++C C T + LQC PS + C + C S L
Sbjct: 60 SLIVANGSYALTANNCIRCSCTPT-HLNLQCFPSGIMVA--------CNRLQCKASH-LF 109
Query: 293 IGN---TTTSNNCNRTTCEYAGYNNLSILTTL 321
IG+ T T CN TTC Y G+ I +L
Sbjct: 110 IGDVVVTKTPAGCNITTCVYRGHGGRKIFRSL 141
>gi|326534404|dbj|BAJ89552.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 23 STAQDFKCSAQTAARCQALVGY------LPPNKTTISEIQSLFTVKNLRSILGANNFPPG 76
++ + F CSA CQA Y +PP+ +S LF V + ANN
Sbjct: 36 ASVEGFNCSANGTYPCQAYALYRAGLAGVPPD---LSAAGDLFGVSRF-MLAHANNLSTS 91
Query: 77 TPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIV 136
+ A +P+ VP+ C C +G+ + Y + D ++ T L +YQ +
Sbjct: 92 A----APAAGQPLLVPLQCGCPSGSPNAYAPTQYQISSGDTFWIVSVTKLQNLTQYQAVE 147
Query: 137 EANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTL 196
N P +++G +T P+ C C +V+++G ++A IA F D +L
Sbjct: 148 RVNPTVVPTKLEVGDMVTFPIFCQCPTAAQNATALVTYVMQQGDTYASIAAAFAVDAQSL 207
Query: 197 MKLNGIHDDSKLIAGEPLDVPLK 219
+ LNG ++L + + VPL+
Sbjct: 208 VSLNGPEQGTQLFS--EILVPLR 228
>gi|428277634|ref|YP_005559369.1| hypothetical protein BSNT_00396 [Bacillus subtilis subsp. natto
BEST195]
gi|291482591|dbj|BAI83666.1| hypothetical protein BSNT_00396 [Bacillus subtilis subsp. natto
BEST195]
Length = 556
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 51 TISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVY 110
T+SEIQSL + N P V + +KV S G + K Y
Sbjct: 211 TLSEIQSLNNISN--------------PDKIQVG--QVLKVYASGNDSGSDGSTRKTTTY 254
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVV 170
TVK D L IA+ FG L +I NNISNPD IQ+GQ L + + D +
Sbjct: 255 TVKSGDNLGSIAQR-FGMTLS--EIQSLNNISNPDKIQVGQVLKVYASGNDSGSDGSTRK 311
Query: 171 HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKAD 228
+ V+ G + IAQ+FG + LN I + K+ G+ L V N K D
Sbjct: 312 TTTYTVKSGDNLGSIAQRFGMTLSEIQSLNNISNPDKIQVGQVLKVYDNGSNDDTKDD 369
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 51 TISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVY 110
T+SEIQSL + N P V + +KV S G + K Y
Sbjct: 28 TLSEIQSLNNISN--------------PDKIQVG--QVLKVYASGNDSGSDGSTRKTTTY 71
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVV 170
TVK D L IA+ FG L +I NNISNPD IQ+GQ L + + D +
Sbjct: 72 TVKSGDNLGSIAQR-FGMTLS--EIQSLNNISNPDKIQVGQVLKVYASGNDSGSDGSTRK 128
Query: 171 HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V+ G + IAQ+FG + LN I + K+ G+ L V
Sbjct: 129 TTTYTVKSGDNLGSIAQRFGMTLSEIQSLNNISNPDKIQVGQVLKV 174
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 51 TISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVY 110
T+SEIQSL + N P V + +KV S G + K Y
Sbjct: 89 TLSEIQSLNNISN--------------PDKIQVG--QVLKVYASGNDSGSDGSTRKTTTY 132
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVV 170
TVK D L IA+ FG L +I NNISNPD IQ+GQ L + + D +
Sbjct: 133 TVKSGDNLGSIAQR-FGMTLS--EIQSLNNISNPDKIQVGQVLKVYASGNDSGSDGSTRK 189
Query: 171 HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V+ G + IAQ+FG + LN I + K+ G+ L V
Sbjct: 190 TTTYTVKSGDNLGSIAQRFGMTLSEIQSLNNISNPDKIQVGQVLKV 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 112 VKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH 171
VK D L IA+ FG L +I NNISNPD IQ+GQ L + + D +
Sbjct: 12 VKSGDNLGSIAQR-FGMTLS--EIQSLNNISNPDKIQVGQVLKVYASGNDSGSDGSTRKT 68
Query: 172 YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V+ G + IAQ+FG + LN I + K+ G+ L V
Sbjct: 69 TTYTVKSGDNLGSIAQRFGMTLSEIQSLNNISNPDKIQVGQVLKV 113
>gi|326525559|dbj|BAJ88826.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 717
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 23 STAQDFKCSAQTAARCQALVGY------LPPNKTTISEIQSLFTVKNLRSILGANNFPPG 76
++ + F CSA CQA Y +PP+ +S LF V + ANN
Sbjct: 103 ASVEGFNCSANGTYPCQAYALYRAGLAGVPPD---LSAAGDLFGVSRF-MLAHANNLS-- 156
Query: 77 TPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIV 136
+ + A +P+ VP+ C C +G+ + Y + D ++ T L +YQ +
Sbjct: 157 --TSAAPAAGQPLLVPLQCGCPSGSPNAYAPTQYQISSGDTFWIVSVTKLQNLTQYQAVE 214
Query: 137 EANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTL 196
N P +++G +T P+ C C +V+++G ++A IA F D +L
Sbjct: 215 RVNPTVVPTKLEVGDMVTFPIFCQCPTAAQNATALVTYVMQQGDTYASIAAAFAVDAQSL 274
Query: 197 MKLNGIHDDSKLIAGEPLDVPLK 219
+ LNG ++L + + VPL+
Sbjct: 275 VSLNGPEQGTQLFS--EILVPLR 295
>gi|297721505|ref|NP_001173115.1| Os02g0681632 [Oryza sativa Japonica Group]
gi|222623452|gb|EEE57584.1| hypothetical protein OsJ_07938 [Oryza sativa Japonica Group]
gi|255671168|dbj|BAH91844.1| Os02g0681632 [Oryza sativa Japonica Group]
Length = 262
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGY------LPPNKTTISEIQSLFTVKNLRSILGA 70
AA ++ + F C+A CQA Y +P ++ I LF + A
Sbjct: 29 AATPAPASNEGFNCTANATYPCQAYALYRAGFGGVP---LELAAIGDLFAASRFM-VAHA 84
Query: 71 NNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLL 130
NN + + A++P+ VP+ C C + + + Y + D ++ T L
Sbjct: 85 NNLS----TSAVLAARQPLLVPLQCGCPSRSPNAYAPMQYQINAGDTYWIVSTTKLQNLT 140
Query: 131 KYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFG 190
+YQ + N P + IGQ +T P+ C C + +V++ G ++A IA F
Sbjct: 141 QYQAVERVNPTLVPTNLDIGQIVTFPIFCQCPTAADNATALVTYVMQPGDTYASIATAFA 200
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
D +L+ LNG ++ ++ + VPL+
Sbjct: 201 VDAQSLVSLNGPEQGTRNLSSPEILVPLR 229
>gi|215415879|dbj|BAG85170.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ +D Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFADIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415865|dbj|BAG85163.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + A C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPASCETYVPYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|351589821|gb|AEQ49631.1| Nod-factor receptor 5, partial [Galega orientalis]
Length = 283
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A + LS +F C + C+ V Y+ PN +++ I +LF + +
Sbjct: 15 LALMLFLTNISAQIQQLSRT-NFTCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDISS 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTENRSFANIS--YSIKTDDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ +AN NP+L+ + + PL C C + K + Y +V E
Sbjct: 127 TLFQNLTNYLEMEDANPSLNPNLLPLDAKVVAPLFCRCPSKNQLNKGIKYLITYVWEAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +++ KF + ++ N D + L P+ +P+
Sbjct: 187 NVTIVSSKFSASQGDMLTQNNFTDAANL----PILIPV 220
>gi|351589825|gb|AEQ49633.1| Nod-factor receptor 5, partial [Galega orientalis]
gi|351589835|gb|AEQ49638.1| Nod-factor receptor 5, partial [Galega orientalis]
Length = 283
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF + +
Sbjct: 15 LALMLFLTNISAQTQQLSRT-NFTCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDISS 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTENRSFANIS--YSIKTDDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ +AN NP+L+ + + PL C C + K + Y +V +
Sbjct: 127 TLFQNLTNYLEMEDANPSLNPNLLPLDAKVVAPLFCRCPSKNQLNKGIKYLITYVWKAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +++ KFG + ++ N D + L P+ +P+
Sbjct: 187 NVTIVSSKFGASQGDMLTQNNFTDAANL----PILIPV 220
>gi|351589823|gb|AEQ49632.1| Nod-factor receptor 5, partial [Galega orientalis]
Length = 281
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF + +
Sbjct: 15 LALMLFLTNISAQTQQLSRT-NFTCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDISS 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTENRSFANIS--YSIKTDDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ +AN NP+L+ + + PL C C + K + Y +V +
Sbjct: 127 TLFQNLTNYLEMEDANPSLNPNLLPLDAKVVAPLFCRCPSKNQLNKGIKYLITYVWKAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +++ KFG + ++ N D + L P+ +P+
Sbjct: 187 NVTIVSSKFGASQGDMLTQNNFTDAANL----PILIPV 220
>gi|351589829|gb|AEQ49635.1| Nod-factor receptor 5, partial [Galega orientalis]
Length = 283
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF + +
Sbjct: 15 LALMLFLTNISAQTQQLSRT-NFTCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDISS 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTENRSFANIS--YSIKTDDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ +AN NP+L+ + + PL C C + K + Y +V +
Sbjct: 127 TLFQNLTNYLEMEDANPSLNPNLLPLDAKVVAPLFCRCPSKNQLNKGIKYLITYVWKAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +++ KFG + ++ N D + L P+ +P+
Sbjct: 187 NVTIVSSKFGASQGDMLTQNNFTDAANL----PILIPV 220
>gi|215415833|dbj|BAG85147.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANTS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|351589837|gb|AEQ49639.1| Nod-factor receptor 5, partial [Galega orientalis]
Length = 283
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 6 LKLVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVK 62
L L L+LF T +A S + +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 13 LFLALMLFLTNISAQSQQLSRTNFTCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDIS 72
Query: 63 NLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 73 SL-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTENRSFANIS--YSIKTDDYYKLIS 125
Query: 123 RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEG 179
T+F L Y ++ +AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 126 ATLFQNLTNYLEMEDANPSLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKAN 185
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ L++ KFG + ++ N + L P+ +P+
Sbjct: 186 DNVTLVSSKFGASQGDMLTENNFTASANL----PIVIPV 220
>gi|215415883|dbj|BAG85172.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNPPVLIPV 223
>gi|351589839|gb|AEQ49640.1| Nod-factor receptor 5, partial [Galega orientalis]
Length = 283
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF + +
Sbjct: 15 LALMLFLTNISAQTQQLSRT-NFTCPVDSPPSCETYVTYIAQSPNFLSLTNIANLFDISS 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTENRSFANIS--YSIKTDDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ +AN NP+L+ + + PL C C + K + Y +V +
Sbjct: 127 TLFQNLTNYLEMEDANPSLNPNLLPLDAKVVAPLFCRCPSKNQLNKGIKYLITYVWKAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +++ KFG + ++ N D + L P+ +P+
Sbjct: 187 NVTIVSSKFGASQGDMLTQNNFTDAANL----PILIPV 220
>gi|215415827|dbj|BAG85144.1| Nod factor receptor protein, partial [Glycine soja]
gi|215415829|dbj|BAG85145.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 13/223 (5%)
Query: 3 NFQ-LKLVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSL 58
+FQ L LV++LF T A S +F C + + C+ V Y+ PN +++ I ++
Sbjct: 7 HFQILCLVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNI 66
Query: 59 FTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGL 118
F L SI A+N P + + + + VP+ C C+ ++ Y + + D
Sbjct: 67 FDTSPL-SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSF 120
Query: 119 DFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHV 175
F+A T + L ++ +++ N + +P+ + IG + PL C C + +D +V
Sbjct: 121 YFVATTSYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYV 180
Query: 176 VEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ G + +L++ KFG + +M N + P+ +P+
Sbjct: 181 WKPGDNVSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415841|dbj|BAG85151.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFETSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415871|dbj|BAG85166.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 12/219 (5%)
Query: 6 LKLVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVK 62
L LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F
Sbjct: 11 LCLVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTS 70
Query: 63 NLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
L SI A+N P + + + + VP+ C C+ ++ Y + + D F+A
Sbjct: 71 PL-SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVA 124
Query: 123 RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEG 179
T + L ++ +++ N + +P+ + IG + PL C C + +D +V + G
Sbjct: 125 TTSYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIRYLITYVWKPG 184
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +L++ KFG + +M N + P+ +P+
Sbjct: 185 DNVSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415831|dbj|BAG85146.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|351589809|gb|AEQ49625.1| Nod-factor receptor 5, partial [Galega officinalis]
Length = 283
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A LS +F C + C+ V Y+ PN ++++I +LF + +
Sbjct: 15 LALMLFLTNISAQSQQLSRT-NFTCPVDSPPSCKTYVTYIAQSPNFLSLTDISNLFDISS 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTGNRSFANIS--YSIKTDDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 127 TLFQNLTNYLEMEAANPSLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ L++ KFG + ++ N + L P+ +P+
Sbjct: 187 NVTLVSSKFGASQGDMLTQNNFTAAANL----PILIPV 220
>gi|215415885|dbj|BAG85173.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415843|dbj|BAG85152.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415873|dbj|BAG85167.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLANISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415895|dbj|BAG85178.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTNPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415867|dbj|BAG85164.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415825|dbj|BAG85143.1| Nod factor receptor protein, partial [Glycine soja]
gi|215415837|dbj|BAG85149.1| Nod factor receptor protein, partial [Glycine soja]
gi|215415851|dbj|BAG85156.1| Nod factor receptor protein, partial [Glycine soja]
gi|215415857|dbj|BAG85159.1| Nod factor receptor protein, partial [Glycine max]
gi|215415859|dbj|BAG85160.1| Nod factor receptor protein, partial [Glycine max]
gi|215415861|dbj|BAG85161.1| Nod factor receptor protein, partial [Glycine max]
gi|215415863|dbj|BAG85162.1| Nod factor receptor protein, partial [Glycine max]
gi|215415869|dbj|BAG85165.1| Nod factor receptor protein, partial [Glycine max]
gi|215415875|dbj|BAG85168.1| Nod factor receptor protein, partial [Glycine max]
gi|215415881|dbj|BAG85171.1| Nod factor receptor protein, partial [Glycine max]
gi|215415887|dbj|BAG85174.1| Nod factor receptor protein, partial [Glycine max]
gi|215415893|dbj|BAG85177.1| Nod factor receptor protein, partial [Glycine max]
gi|215415897|dbj|BAG85179.1| Nod factor receptor protein, partial [Glycine max]
gi|215415899|dbj|BAG85180.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415839|dbj|BAG85150.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYFAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415853|dbj|BAG85157.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415847|dbj|BAG85154.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVPFPLFCKCPSKNQLDKEIKYLITYVWKPGDD 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYDQNFTAANNLPVLIPV 223
>gi|299481068|gb|ADJ19109.1| truncated Nod-factor receptor 5A [Glycine max]
Length = 337
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 17 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 76
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 77 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 130
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 131 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 190
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 191 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 227
>gi|351589799|gb|AEQ49620.1| Nod-factor receptor 5 [Galega orientalis]
Length = 592
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF + +
Sbjct: 15 LALMLFLTNISAQTQQLSRT-NFTCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDISS 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDSKL---IPNQ-VLLVPVTCGCTENRSFAN--ISYSIKTDDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ +AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 127 TLFQNLTNYLEMEDANPSLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ L++ KFG + ++ N + L P+ +P+
Sbjct: 187 NVTLVSSKFGASQGDMLTENNFTASANL----PIVIPV 220
>gi|215415835|dbj|BAG85148.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
S+ A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SVARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|351589803|gb|AEQ49622.1| Nod-factor receptor 5, partial [Galega officinalis]
Length = 283
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 6 LKLVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVK 62
L L L+LF T +A S + +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 13 LFLALMLFLTNISAQSQQLSRTNFTCPVDSPPSCKTYVTYIAQSPNFLSLTNISNLFDIS 72
Query: 63 NLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 73 SL-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTGNRSFANIS--YSIKTDDYYKLIS 125
Query: 123 RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEG 179
T+F L Y ++ AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 126 ATLFQNLTNYLEMEAANPSLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKAN 185
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ L++ KFG + ++ N + L P+ +P+
Sbjct: 186 DNVTLVSSKFGASQGDMLTQNNFTAAANL----PILIPV 220
>gi|215415855|dbj|BAG85158.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLN 200
+L++ KFG + +M N
Sbjct: 187 VSLVSDKFGASPEDIMSEN 205
>gi|351589811|gb|AEQ49626.1| Nod-factor receptor 5, partial [Galega officinalis]
Length = 283
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 6 LKLVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVK 62
L L L+LF T +A S + +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 13 LFLALMLFLTNISAQSQQLSRTNFTCPVDSPPSCKTYVTYIAQSPNFLSLTNISNLFDIS 72
Query: 63 NLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 73 SL-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTGNRSFANIS--YSIKTDDYYKLIS 125
Query: 123 RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEG 179
T+F L Y ++ AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 126 ATLFQNLTNYLEMEAANPSLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKAN 185
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ L++ KFG + ++ N + L P+ +P+
Sbjct: 186 DNVTLVSSKFGASQGDMLTQNNFTAAANL----PILIPV 220
>gi|351589831|gb|AEQ49636.1| Nod-factor receptor 5, partial [Galega orientalis]
Length = 283
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 15 LALMLFLTNISAQTQQLSRT-NFTCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDISP 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + + + + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDS----KLTPNQVLLVPVTCGCTENRSFANIS--YSIKADDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ +AN NP+L+ + + PL C C + K + Y +V +
Sbjct: 127 TLFQNLTNYLEMEDANPSLNPNLLPLDAKVVAPLFCRCPSKNQLNKGIKYLITYVWKAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +++ KFG + ++ N D + L P+ +P+
Sbjct: 187 NVTIVSSKFGASQGDMLTQNNFTDAANL----PILIPV 220
>gi|215415889|dbj|BAG85175.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTKFTCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|299481070|gb|ADJ19110.1| truncated Nod-factor receptor 5A [Glycine max]
Length = 501
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 17 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 76
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 77 -SIARASNLEPMDDK---LVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 130
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 131 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 190
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 191 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 227
>gi|351589813|gb|AEQ49627.1| Nod-factor receptor 5, partial [Galega officinalis]
Length = 283
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 6 LKLVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVK 62
L L L+LF T +A S + +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 13 LFLALMLFLTNISAQSQQLSRTNFTCPVDSPPSCKTYVTYIAQSPNFLSLTNISNLFDIS 72
Query: 63 NLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 73 SL-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTGNRSFANIS--YSIKTDDYYKLIS 125
Query: 123 RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEG 179
T+F L Y ++ AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 126 ATLFQNLTDYLEMEAANPSLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKAN 185
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ L++ KFG + ++ N + L P+ +P+
Sbjct: 186 DNVTLVSSKFGASQGDMLTQNNFTAAANL----PILIPV 220
>gi|351589801|gb|AEQ49621.1| Nod-factor receptor 5, partial [Galega officinalis]
Length = 283
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 6 LKLVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVK 62
L L L+LF T +A S + +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 13 LFLALMLFLTNISAQSQQLSRTNFTCPVDSPPSCKTYVTYIAQSPNFLSLTNISNLFDIS 72
Query: 63 NLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 73 SL-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTGNRSFANIS--YSIKTDDYYKLIS 125
Query: 123 RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEG 179
T+F L Y ++ AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 126 ATLFQNLTNYLEMEAANPSLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKAN 185
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKL 208
+ L++ KFG + ++ N + L
Sbjct: 186 DNVTLVSSKFGASQGDMLTQNNFTAAANL 214
>gi|215415823|dbj|BAG85142.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
L++ KFG + +M N + P+ +P+
Sbjct: 187 VFLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|356537980|ref|XP_003537484.1| PREDICTED: Nod factor receptor protein [Glycine max]
gi|148362061|gb|ABQ59609.1| NFR5a [Glycine max]
gi|299481060|gb|ADJ19105.1| Nod-factor receptor 5A [Glycine max]
gi|299481066|gb|ADJ19108.1| Nod-factor receptor 5A [Glycine max]
Length = 598
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 17 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 76
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 77 -SIARASNLEPMDDK---LVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 130
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 131 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 190
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 191 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 227
>gi|299481062|gb|ADJ19106.1| Nod-factor receptor 5A [Glycine max]
Length = 598
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 17 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 76
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 77 -SIARASNLEPMDDK---LVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 130
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 131 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 190
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 191 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 227
>gi|299481064|gb|ADJ19107.1| Nod-factor receptor 5A [Glycine max]
Length = 598
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 17 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 76
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 77 -SIARASNLEPMDDK---LVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 130
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 131 SYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 190
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 191 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 227
>gi|351589833|gb|AEQ49637.1| Nod-factor receptor 5, partial [Galega orientalis]
Length = 283
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF + +
Sbjct: 15 LALMLFLTNISAQTQQLSRT-NFTCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDISS 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTENRSFANIS--YSIKTDDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ +A+ NP+L+ + + PL C C + K + Y +V +
Sbjct: 127 TLFQNLTNYLEMEDASPSLNPNLLPLDAKVVAPLFCRCPSKNQLNKGIKYLITYVWKAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +++ KFG + ++ N D + L P+ +P+
Sbjct: 187 NVTIVSSKFGASQGDMLTQNNFTDAANL----PILIPV 220
>gi|115448925|ref|NP_001048242.1| Os02g0769200 [Oryza sativa Japonica Group]
gi|113537773|dbj|BAF10156.1| Os02g0769200 [Oryza sativa Japonica Group]
gi|215741335|dbj|BAG97830.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 254
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 38 CQALVGYLPPNKTTISEIQSLF-TVKNLRSILGANNF-PPGTPRNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ +LF T A +F PG +P ++VP C
Sbjct: 42 CSALLGYTLYADMKVSEVAALFGTDPAALLAANALDFGAPGAAHRI-LPMGLFVRVPTRC 100
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS--NPDL-IQIGQN 152
C++G S V Y + D L +A +F L +I AN ++ +PD + GQ
Sbjct: 101 SCTDGVRKSVSV-RYAARPADTLATVADGVFAGLAFADQIRNANAVASADPDAPLDPGQK 159
Query: 153 LTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
L +PLPC C +N V+ ++VV+ G + IA + T +M +N + S + A
Sbjct: 160 LVVPLPCVCFNSSDNNLPAVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAMG--SPIAA 217
Query: 211 -GEPLDVPLKACNSS 224
G+ L +PL SS
Sbjct: 218 PGDILAIPLPGTCSS 232
>gi|355000200|gb|AER51030.1| Nod-factor receptor 5, partial [Lotus subbiflorus]
gi|355000202|gb|AER51031.1| Nod-factor receptor 5, partial [Lotus subbiflorus]
Length = 587
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGTDFSCPVDSPPSCETYVTYTAQSPNFLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D DF+A T++ L ++
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCTGNHSFANTS--YQIQLGDSYDFVATTLYENLTNWKI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
+ ++N NP L+ G + PL C C + ++N +V + + +L++ KFG
Sbjct: 139 VQDSNTGVNPYLLPEGIKVVFPLFCRCPSKNQLNNGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILAENRYGQDFTAATNLPVLIPV 225
>gi|351589827|gb|AEQ49634.1| Nod-factor receptor 5, partial [Galega orientalis]
Length = 283
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKN 63
L L+L L + A LS +F C + C+ V Y+ P +++ I +LF + +
Sbjct: 15 LALMLFLTNISAQTQQLSRT-NFTCPVDSPPSCETYVTYIAQSPKFLSLTNISNLFDISS 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I+
Sbjct: 74 L-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTENRSFANIS--YSIKTDDYYKLISA 126
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGS 180
T+F L Y ++ +AN NP+L+ + + PL C C + K + Y +V +
Sbjct: 127 TLFQNLTNYLEMDDANPSLNPNLLPLDAKVVAPLFCRCPSKNQLNKGIKYLITYVWKAND 186
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +++ KFG + ++ N D + L P+ +P+
Sbjct: 187 NVTIVSSKFGASQGDMLTQNNFTDAANL----PILIPV 220
>gi|215415877|dbj|BAG85169.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L + +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNRRAVMDLNPVLSPNKLPIGIQVVFPLFCECPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|215415891|dbj|BAG85176.1| Nod factor receptor protein, partial [Glycine max]
Length = 327
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD--NAKVVHY-AHVVEEGSS 181
+ L ++ + + N + +P+ + IG + PL C C + + ++ H +V + G +
Sbjct: 127 SYENLTNWRAVRDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKHLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|254443434|ref|ZP_05056910.1| LysM domain protein [Verrucomicrobiae bacterium DG1235]
gi|198257742|gb|EDY82050.1| LysM domain protein [Verrucomicrobiae bacterium DG1235]
Length = 419
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 104 SDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDD 163
S+ V V+ V+K + L IA+ + Q I AN ISN + I++GQ LTIP+P S D
Sbjct: 19 SEAVTVHRVRKGETLTEIAQ---AYKVTAQAIKNANKISNANRIKVGQELTIPVP-SSDT 74
Query: 164 VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
V+ AH V +G + IAQ + + + N I + ++++AG+ L +P A
Sbjct: 75 VETTATT--AHRVRKGETLTEIAQAYKVTVEAIKSANQITNANQIVAGQQLTIPAAA 129
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 30/175 (17%)
Query: 51 TISEIQSLFTV-----KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSD 105
T++EI + V KN I AN G VP S+ T +
Sbjct: 32 TLTEIAQAYKVTAQAIKNANKISNANRIKVGQELTIPVP-------------SSDTVETT 78
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
+ V+K + L IA+ + + I AN I+N + I GQ LTIP
Sbjct: 79 ATTAHRVRKGETLTEIAQ---AYKVTVEAIKSANQITNANQIVAGQQLTIPAAAPS---- 131
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
V+ Y + G + + IA+K+G L LN I + +K+ G+ + +P+ A
Sbjct: 132 ---VIEYK--IRRGDNLSDIAKKYGASLSELKALNAIRNSNKISIGQVIRIPVSA 181
>gi|115377454|ref|ZP_01464657.1| glycoside hydrolase, family 19 [Stigmatella aurantiaca DW4/3-1]
gi|310823954|ref|YP_003956312.1| glycoside hydrolase [Stigmatella aurantiaca DW4/3-1]
gi|115365552|gb|EAU64584.1| glycoside hydrolase, family 19 [Stigmatella aurantiaca DW4/3-1]
gi|309397026|gb|ADO74485.1| Glycoside hydrolase, family 19 [Stigmatella aurantiaca DW4/3-1]
Length = 374
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA+ FG + +ANNISNP+LI++GQ LTIP +
Sbjct: 63 YTVRAGDTLSGIAQK-FGTTTG--ALAKANNISNPNLIRVGQKLTIPGASASRPPSPPPS 119
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
Y V G + + IAQ+FGT + L K N I + + + G+ L +P S D
Sbjct: 120 QSY--TVRSGDTLSGIAQRFGTTTNALAKANNISNPNLIRVGQKLTIPGGTKPGS--QDG 175
Query: 230 FD 231
FD
Sbjct: 176 FD 177
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 122 ARTIFGQLLKYQ----KIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVE 177
T+ G KY K+ + N I+NPD IQ+GQ L + S +Y V
Sbjct: 9 GETLTGIARKYNTTVNKLAQDNGIANPDKIQVGQKLNVSGSASAARPGTDSPQNY--TVR 66
Query: 178 EGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
G + + IAQKFGT L K N I + + + G+ L +P
Sbjct: 67 AGDTLSGIAQKFGTTTGALAKANNISNPNLIRVGQKLTIP 106
>gi|357143160|ref|XP_003572823.1| PREDICTED: proline-rich receptor-like protein kinase PERK8-like
[Brachypodium distachyon]
Length = 658
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 24 TAQDFKCSAQTAARCQALVGY---LPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRN 80
+ + F CSA + CQA Y +S + LF V I ANN
Sbjct: 43 SVEGFNCSANSTYPCQAYALYRAGFAGVPLDLSAVGDLFGVSRF-MIAHANNLS-----T 96
Query: 81 FSVPAQ-KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN 139
+ PA +P+ VP+ C C + + + Y + D ++ T L +YQ + N
Sbjct: 97 TAAPAAGQPLLVPLQCGCPSRSPNAYAPTQYQIDSGDTYWIVSVTKLQNLTQYQAVERVN 156
Query: 140 NISNPDLIQIGQNLTIPLPCSCDDV---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTL 196
P +++G +T P+ C C DNA + +V+++G ++A IA F + +L
Sbjct: 157 PTLTPTKLEVGDMVTFPIFCQCPAAAGNDNATAL-VTYVMQQGDTYASIADAFAVNAQSL 215
Query: 197 MKLNGIHDDSKLIAGEPLDVPLK 219
+ LNG +KL + + VPL+
Sbjct: 216 VSLNGPEQGTKLFS--EILVPLR 236
>gi|300115511|ref|YP_003762086.1| lytic transglycosylase [Nitrosococcus watsonii C-113]
gi|299541448|gb|ADJ29765.1| Lytic transglycosylase catalytic [Nitrosococcus watsonii C-113]
Length = 503
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 83 VPAQKPIKVPIHCICSNGTGVS---------DKVP--VYTVKKDDGLDFIARTIFGQLLK 131
+P +++P CS ++ +++P V+ V++ L IAR +K
Sbjct: 354 LPRGYRLRIPCTPTCSGAKALTYLAPWERFEEQIPNRVHKVQQGQTLSHIARRYH---IK 410
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCD-DVDNAKVVHYAHVVEEGSSFALIAQKFG 190
K+++ N ++N I+IGQ L +P P + D + +K HY V+ G + + IA +FG
Sbjct: 411 VHKLIKLNKLANRHHIRIGQILQLPFPATADGNHARSKTGHY--TVQRGDTLSRIAHRFG 468
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPL 214
+ L+K N I D ++ AG+ L
Sbjct: 469 ITQQALLKSNNITDKHRIYAGQNL 492
>gi|404369519|ref|ZP_10974853.1| hypothetical protein CSBG_03362 [Clostridium sp. 7_2_43FAA]
gi|404301769|gb|EEH99736.2| hypothetical protein CSBG_03362 [Clostridium sp. 7_2_43FAA]
Length = 438
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 100 GTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPC 159
G+ + YTVK+ D L IA+ +G +++ E NNISNP+LI GQ L I
Sbjct: 326 GSTLGGTATTYTVKEGDTLSEIAQR-YGTTT--ERLAEINNISNPNLIYPGQVLKISSNS 382
Query: 160 SCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
S + Y +V+EG + + IAQ++GT + L ++N I D + + GE + +
Sbjct: 383 SAGNTSGGTATTY--IVKEGDTLSEIAQRYGTTTERLAQINNISDPNLIYPGEVIRI 437
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK+ D L IA+ +G +++ + NNISNP+LI GQ L I S +
Sbjct: 218 YTVKEGDTLSEIAQR-YGTTT--ERLAQINNISNPNLIYPGQVLKISSNSSAGNTSGGTA 274
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
Y V+EG + + IAQ++GT + L ++N I + + + G+ L +
Sbjct: 275 TTY--TVKEGDTLSEIAQRYGTTTERLAEINNISNPNLIYPGQVLRI 319
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 80 NFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN 139
N P Q +K+ + N +G YTVK+ D L IA+ +G +++ E N
Sbjct: 250 NLIYPGQ-VLKISSNSSAGNTSG--GTATTYTVKEGDTLSEIAQR-YGTTT--ERLAEIN 303
Query: 140 NISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKL 199
NISNP+LI GQ L I Y V+EG + + IAQ++GT + L ++
Sbjct: 304 NISNPNLIYPGQVLRISSNSLTGSTLGGTATTY--TVKEGDTLSEIAQRYGTTTERLAEI 361
Query: 200 NGIHDDSKLIAGEPLDV 216
N I + + + G+ L +
Sbjct: 362 NNISNPNLIYPGQVLKI 378
>gi|215415849|dbj|BAG85155.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATP 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + +P+ + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSPNKLPIGIQVEFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|444918081|ref|ZP_21238162.1| Membrane-bound lytic murein transglycosylase D precursor
[Cystobacter fuscus DSM 2262]
gi|444710289|gb|ELW51274.1| Membrane-bound lytic murein transglycosylase D precursor
[Cystobacter fuscus DSM 2262]
Length = 369
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 89 IKVPIHCICS-------NGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
IK P H + G+ S YTV+ D L IA+ + +AN I
Sbjct: 32 IKNPNHILAGQKLTVPGGGSAPSAGAGSYTVRSGDTLSGIAQR---HGTTVSALAQANGI 88
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYA-HVVEEGSSFALIAQKFGTDRDTLMKLN 200
NPDLIQ+GQ L+IP + V G + + IAQ++GT L + N
Sbjct: 89 KNPDLIQVGQKLSIPGKGGTSAPSAPSAPATGSYTVRSGDTLSGIAQRYGTTVSALAQAN 148
Query: 201 GIHDDSKLIAGEPLDVP 217
GI + + + G+ L VP
Sbjct: 149 GISNPNHIQVGQKLRVP 165
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 109 VYTVKKDDGLDFIAR---TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
Y+V+ D L IA+ T G L +AN I NP+ I GQ LT+P S
Sbjct: 3 TYSVRSGDTLSAIAQRYHTTVGAL------AQANGIKNPNHILAGQKLTVPGGGSAPSAG 56
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
++ V G + + IAQ+ GT L + NGI + + G+ L +P K
Sbjct: 57 AG-----SYTVRSGDTLSGIAQRHGTTVSALAQANGIKNPDLIQVGQKLSIPGKGG 107
>gi|302873143|ref|YP_003841776.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307688692|ref|ZP_07631138.1| glycoside hydrolase family 25 [Clostridium cellulovorans 743B]
gi|302576000|gb|ADL50012.1| glycoside hydrolase family 25 [Clostridium cellulovorans 743B]
Length = 426
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
+ S+G G + Y V+ +D L IA FG +Q + E N I+NPDLIQIGQ L I
Sbjct: 308 LASSGQGTA----TYIVQGEDTLSTIAEQ-FG--TSWQALAEINGIANPDLIQIGQVLRI 360
Query: 156 ----PLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAG 211
+ D+ + ++V+ G + + IAQ+FGT ++L +LNG+ + + G
Sbjct: 361 SKASAIAQGGTSPDSGGQGNTTYIVQGGDTLSAIAQRFGTSWESLAQLNGLANPDLIYEG 420
Query: 212 EPLDV 216
+ L +
Sbjct: 421 QVLRI 425
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 25/129 (19%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI---------PLPCS 160
Y V+ D L IA FG +Q + E N ISNPDLIQIGQ L I + +
Sbjct: 235 YIVQGGDTLSAIAEQ-FG--TSWQVLAEINGISNPDLIQIGQALRISKTQNISQGEVSAA 291
Query: 161 CDDVDNAKVVHYA-------------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSK 207
+ + V ++V+ + + IA++FGT L ++NGI +
Sbjct: 292 IAQGETSAAVAQGGTPLASSGQGTATYIVQGEDTLSTIAEQFGTSWQALAEINGIANPDL 351
Query: 208 LIAGEPLDV 216
+ G+ L +
Sbjct: 352 IQIGQVLRI 360
>gi|414885721|tpg|DAA61735.1| TPA: hypothetical protein ZEAMMB73_174964 [Zea mays]
Length = 618
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 11/220 (5%)
Query: 5 QLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNL 64
+L L +LL + + LS + C++ +A C AL+ Y ++E+ +LF L
Sbjct: 324 RLALFVLLLSGSGVPTALSKSTLESCASSSA--CPALLSYTLYADLKLAELAALFAADPL 381
Query: 65 RSILGAN--NFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+IL AN +F P + +PA ++VP+ C CS+G + Y + D L +A
Sbjct: 382 -AILAANAMDFAVPDPGDRILPAGLALRVPVPCACSDGIRKATSA-RYVARAGDTLASVA 439
Query: 123 RTIFGQLLKYQKIVEANNISNPD--LIQIGQNLTIPLPCSC-DDVDN-AKVVHYAHVVEE 178
+++G L I ++N ++ + + G L +PL C+C D+ A V + V E
Sbjct: 440 GSVYGGLTTADWIRDSNGMAEEEDAALDAGTTLFVPLHCACFGGADSGAPAVFLTYPVAE 499
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
G + IA++F T + LM +N + + + AG+ + VPL
Sbjct: 500 GDTVPAIARRFRTTGNDLMSVNDLA-TADVAAGDIIVVPL 538
>gi|215415845|dbj|BAG85153.1| Nod factor receptor protein, partial [Glycine soja]
Length = 327
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 8 LVLLLF-TVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNL 64
LV++LF T A S +F C + + C+ V Y+ PN +++ I ++F L
Sbjct: 13 LVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPL 72
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + + + VP+ C C+ ++ Y + + D F+A T
Sbjct: 73 -SIARASNL---EPMDDKLVKDQVLLVPVTCGCTGNRSFANIS--YEINQGDSFYFVATT 126
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N + + + + IG + PL C C + +D +V + G +
Sbjct: 127 SYENLTNWRAVMDLNPVLSSNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDN 186
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L++ KFG + +M N + P+ +P+
Sbjct: 187 VSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 223
>gi|125540687|gb|EAY87082.1| hypothetical protein OsI_08480 [Oryza sativa Indica Group]
Length = 651
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 10/207 (4%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPG 76
AA ++ + F C+A C A Y + + F + + A+ F
Sbjct: 29 AATPAPASNEGFNCTANATYPCPAYALY----RAGFGGVPLEFAA--IGDLFAASRFMVA 82
Query: 77 TPRNFS----VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKY 132
N S + A++P+ VP+ C C + + + Y + D ++ T L +Y
Sbjct: 83 HANNLSTSAVLAARQPLLVPLQCGCPSRSPNAYAPMQYQINAGDTYWIVSTTKLQNLTQY 142
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
Q + N P + IGQ +T P+ C C ++ +V++ G ++A IA F D
Sbjct: 143 QAVERVNPTLVPTNLDIGQIVTFPIFCQCPTAEDNATALVTYVMQPGDTYASIATAFAVD 202
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+L+ LNG ++ ++ + VPL+
Sbjct: 203 AQSLVSLNGPEQGTRNLSSPEILVPLR 229
>gi|414880521|tpg|DAA57652.1| TPA: hypothetical protein ZEAMMB73_254886 [Zea mays]
Length = 233
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVK-NLRSILGANNF-PPGTPRNFSVPAQKPIKVPIHC 95
C AL+GY +SE+ +LF V A +F PG +P ++VP C
Sbjct: 44 CPALLGYTLYADMKVSEVAALFAVDPAALLAANALDFGAPGAAHRI-LPMGLFVRVPTRC 102
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI--SNPDL-IQIGQN 152
C++G S V Y + D L ++ +F L +I N + ++PD + GQ
Sbjct: 103 SCADGVRKSVSV-RYAARPADTLATVSDVVFAGLASSDQIRNENGLTSADPDAPLDAGQK 161
Query: 153 LTIPLPCSC--DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
L IPLPC C +N V+ ++VV+ G + IA + T +M +N + S + A
Sbjct: 162 LAIPLPCVCFNSSDNNLPAVYLSYVVQVGDTVPAIAASYETTVTDVMNVNAMG--SPVAA 219
Query: 211 -GEPLDVPL 218
G+ L +PL
Sbjct: 220 PGDILAIPL 228
>gi|351589797|gb|AEQ49619.1| Nod-factor receptor 5 [Galega officinalis]
Length = 592
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 10 LLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSI 67
+L T +A S + +F C + C+ V Y+ PN +++ I +LF + +L SI
Sbjct: 18 MLFLTNISAQSQQLSRTNFTCPVDSPPSCKTYVTYIAQSPNFLSLTNISNLFDISSL-SI 76
Query: 68 LGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFG 127
A+N + +P Q + VP+ C C+ ++ Y++K DD I+ T+F
Sbjct: 77 SKASNIDEDSKL---IPNQ-VLLVPVTCGCTGNRSFAN--ISYSIKTDDYYKLISATLFQ 130
Query: 128 QLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFAL 184
L Y ++ AN NP+L+ + + +PL C C + K + Y +V + + L
Sbjct: 131 NLTNYLEMEAANPSLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKANDNVTL 190
Query: 185 IAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ KFG + ++ N + L P+ +P+
Sbjct: 191 VSSKFGASQGDMLTQNNFTAAANL----PILIPV 220
>gi|212274699|ref|NP_001130858.1| uncharacterized protein LOC100191962 precursor [Zea mays]
gi|194690286|gb|ACF79227.1| unknown [Zea mays]
Length = 307
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 11/220 (5%)
Query: 5 QLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNL 64
+L L +LL + + LS + C++ +A C AL+ Y ++E+ +LF L
Sbjct: 13 RLALFVLLLSGSGVPTALSKSTLESCASSSA--CPALLSYTLYADLKLAELAALFAADPL 70
Query: 65 RSILGAN--NFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
+IL AN +F P + +PA ++VP+ C CS+G + Y + D L +A
Sbjct: 71 -AILAANAMDFAVPDPGDRILPAGLALRVPVPCACSDGIRKATSA-RYVARAGDTLASVA 128
Query: 123 RTIFGQLLKYQKIVEANNISNPD--LIQIGQNLTIPLPCSC-DDVDN-AKVVHYAHVVEE 178
+++G L I ++N ++ + + G L +PL C+C D+ A V + V E
Sbjct: 129 GSVYGGLTTADWIRDSNGMAEEEDAALDAGTTLFVPLHCACFGGADSGAPAVFLTYPVAE 188
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
G + IA++F T + LM +N + + + AG+ + VPL
Sbjct: 189 GDTVPAIARRFRTTGNDLMSVNDLA-TADVAAGDIIVVPL 227
>gi|225386511|ref|ZP_03756275.1| hypothetical protein CLOSTASPAR_00258 [Clostridium asparagiforme
DSM 15981]
gi|225047370|gb|EEG57616.1| hypothetical protein CLOSTASPAR_00258 [Clostridium asparagiforme
DSM 15981]
Length = 385
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IAR FG + Q +V ANNI++P+LI GQ LTIP DD+
Sbjct: 238 YTVRPGDTLWAIARR-FGTTV--QDLVRANNIADPNLIYPGQVLTIP---GHDDM----- 286
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V G + IAQ+FGT L+ LNGI D + G+ L +P
Sbjct: 287 -QAVYTVRPGDTLWAIAQRFGTTVQELVNLNGIADPDLIYPGQVLRLP 333
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 104 SDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
S V VY V + D L IA FG + Q + AN+I+NP+LI +GQ L IP
Sbjct: 335 SSSVLVYRVVRGDTLSGIALR-FGTTV--QALARANHIANPNLIDVGQTLVIP 384
>gi|356523459|ref|XP_003530356.1| PREDICTED: LOW QUALITY PROTEIN: lysM domain-containing GPI-anchored
protein 1-like [Glycine max]
Length = 208
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 89 IKVPIHCICSNGTGVSDKVPV-YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
+KVPI C S G+ V Y + D L I ++ L+ ++ EAN+IS+P ++
Sbjct: 80 LKVPISC--SYVDGICKSVATHYKTRPSDTLXSIVDAVYASLVSSDQLPEANSISDPLVL 137
Query: 148 QIGQNLTIPLPCSC-DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
+GQNL +PLPC+C + DN+ Y V+ +FA++A ++ T LM +N
Sbjct: 138 DVGQNLVVPLPCTCFNGSDNSLPAIYLSYVD---TFAVVAARYFTTLTDLMNVN 188
>gi|449107163|ref|ZP_21743820.1| hypothetical protein HMPREF9729_02085 [Treponema denticola ASLM]
gi|451968859|ref|ZP_21922088.1| hypothetical protein HMPREF9728_01272 [Treponema denticola US-Trep]
gi|448962964|gb|EMB43649.1| hypothetical protein HMPREF9729_02085 [Treponema denticola ASLM]
gi|451702312|gb|EMD56734.1| hypothetical protein HMPREF9728_01272 [Treponema denticola US-Trep]
Length = 301
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC--DDVDNAKV--VHYAHVVEEGSSFALIAQKFG 190
I++ NN+S+P I+IGQ L IP+ S D NAK HV+++G + +A+KFG
Sbjct: 48 ILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTGPEEITHVIQKGDTLYALAKKFG 107
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++KLNG+++ + L G+ L +P
Sbjct: 108 VKFSDILKLNGLNEKTSLKIGQILKIP 134
>gi|221632505|ref|YP_002521726.1| LysM domain-containing protein [Thermomicrobium roseum DSM 5159]
gi|221155362|gb|ACM04489.1| LysM domain protein [Thermomicrobium roseum DSM 5159]
Length = 464
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 7/124 (5%)
Query: 103 VSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP-LPCSC 161
VS++V + V+ + L IA+ +G + + I +AN + +PD I +GQ L IP +P +
Sbjct: 162 VSERV--HRVRPGERLTSIAQR-YG--VSVESIRQANRLPDPDRILVGQMLVIPSVPETA 216
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
D +A +VV+ G + + +A +FG TL+K NGI D +L+AG+ L +P +
Sbjct: 217 MDT-SASSSARRYVVQPGDTLSALAVRFGVPLSTLVKANGITDPDRLLAGQTLVIPRREL 275
Query: 222 NSSI 225
+ +
Sbjct: 276 GAGV 279
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
+ AN +SNPD I +G L IP + V H V G IAQ++G +
Sbjct: 136 LARANELSNPDRILVGAVLRIP--------ASLLVSERVHRVRPGERLTSIAQRYGVSVE 187
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
++ + N + D +++ G+ L +P
Sbjct: 188 SIRQANRLPDPDRILVGQMLVIP 210
>gi|449109614|ref|ZP_21746248.1| hypothetical protein HMPREF9722_01944 [Treponema denticola ATCC
33520]
gi|448958857|gb|EMB39585.1| hypothetical protein HMPREF9722_01944 [Treponema denticola ATCC
33520]
Length = 301
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC--DDVDNAK--VVHYAHVVEEGSSFALIAQKFG 190
I++ NN+S+P I+IGQ L IP+ S D NAK + HVV++G + +A+KFG
Sbjct: 48 ILKKNNLSDPSKIKIGQKLIIPVENSAKNDKKTNAKTNLEEITHVVQKGDTLYALAKKFG 107
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++KLNG+++ + L G+ L +P
Sbjct: 108 VKFSDILKLNGLNEKTPLKIGQILKIP 134
>gi|449131056|ref|ZP_21767273.1| hypothetical protein HMPREF9724_01938 [Treponema denticola SP37]
gi|448940402|gb|EMB21308.1| hypothetical protein HMPREF9724_01938 [Treponema denticola SP37]
Length = 301
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC--DDVDNAKV--VHYAHVVEEGSSFALIAQKFG 190
I++ NN+S+P I+IGQ L IP+ S D NAK HV+++G + +A+KFG
Sbjct: 48 ILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTGSEEITHVIQKGDTLYALAKKFG 107
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++KLNG+++ + L G+ L +P
Sbjct: 108 VKFSDILKLNGLNEKTPLKIGQILKIP 134
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL-------KACNSSIK 226
H++E+G + I++K+ T D+++K N + D SK+ G+ L +P+ K N+
Sbjct: 26 HIIEKGDTLYSISKKYNTPIDSILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTG 85
Query: 227 ADSFDNYLRVANGTYTFTANSCVK 250
++ + ++ + Y VK
Sbjct: 86 SEEITHVIQKGDTLYALAKKFGVK 109
>gi|449120293|ref|ZP_21756679.1| hypothetical protein HMPREF9725_02144 [Treponema denticola H1-T]
gi|449122698|ref|ZP_21759031.1| hypothetical protein HMPREF9727_01791 [Treponema denticola MYR-T]
gi|448947688|gb|EMB28532.1| hypothetical protein HMPREF9727_01791 [Treponema denticola MYR-T]
gi|448948437|gb|EMB29274.1| hypothetical protein HMPREF9725_02144 [Treponema denticola H1-T]
Length = 301
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC--DDVDNAK--VVHYAHVVEEGSSFALIAQKFG 190
I++ NN+S+P I+IGQ L IP+ S + NAK + HVV++G + +A+KFG
Sbjct: 48 ILKKNNLSDPSKIKIGQKLIIPVESSAKNEKKTNAKTNLEEITHVVQKGDTLYALAKKFG 107
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++KLNG+++ + L G+ L +P
Sbjct: 108 VKFSDILKLNGLNEKTSLKIGQILKIP 134
>gi|42526805|ref|NP_971903.1| LysM/M23/M37 peptidase [Treponema denticola ATCC 35405]
gi|449112130|ref|ZP_21748685.1| hypothetical protein HMPREF9735_01734 [Treponema denticola ATCC
33521]
gi|449113066|ref|ZP_21749581.1| hypothetical protein HMPREF9721_00099 [Treponema denticola ATCC
35404]
gi|41817120|gb|AAS11814.1| LysM domain/M23/M37 peptidase domain protein [Treponema denticola
ATCC 35405]
gi|448956411|gb|EMB37172.1| hypothetical protein HMPREF9735_01734 [Treponema denticola ATCC
33521]
gi|448960646|gb|EMB41355.1| hypothetical protein HMPREF9721_00099 [Treponema denticola ATCC
35404]
Length = 301
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC--DDVDNAKV--VHYAHVVEEGSSFALIAQKFG 190
I++ NN+S+P I+IGQ L IP+ S D NAK HV+++G + +A+KFG
Sbjct: 48 ILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTGSEEITHVIQKGDTLYALAKKFG 107
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++KLNG+++ + L G+ L +P
Sbjct: 108 VKFSDILKLNGLNEKTPLKIGQILKIP 134
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL-------KACNSSIK 226
H++E+G + I++K+ T D+++K N + D SK+ G+ L +P+ K N+
Sbjct: 26 HIIEKGDTLYSISKKYNTPIDSILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTG 85
Query: 227 ADSFDNYLRVANGTYTFTANSCVK 250
++ + ++ + Y VK
Sbjct: 86 SEEITHVIQKGDTLYALAKKFGVK 109
>gi|449102837|ref|ZP_21739584.1| hypothetical protein HMPREF9730_00481 [Treponema denticola AL-2]
gi|449126041|ref|ZP_21762335.1| hypothetical protein HMPREF9723_02379 [Treponema denticola OTK]
gi|448938755|gb|EMB19682.1| hypothetical protein HMPREF9723_02379 [Treponema denticola OTK]
gi|448965639|gb|EMB46300.1| hypothetical protein HMPREF9730_00481 [Treponema denticola AL-2]
Length = 301
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC--DDVDNAKV--VHYAHVVEEGSSFALIAQKFG 190
I++ NN+S+P I+IGQ L IP+ S D NAK HV+++G + +A+KFG
Sbjct: 48 ILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTGSEEITHVIQKGDTLYALAKKFG 107
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++KLNG+++ + L G+ L +P
Sbjct: 108 VKFSDILKLNGLNEKTPLKIGQILKIP 134
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL-------KACNSSIK 226
H++E+G + I++K+ T D+++K N + D SK+ G+ L +P+ K N+
Sbjct: 26 HIIEKGDTLYSISKKYNTPIDSILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTG 85
Query: 227 ADSFDNYLRVANGTYTFTANSCVK 250
++ + ++ + Y VK
Sbjct: 86 SEEITHVIQKGDTLYALAKKFGVK 109
>gi|224071527|ref|XP_002335938.1| predicted protein [Populus trichocarpa]
gi|222836450|gb|EEE74857.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 24 TAQDFKCSA-QTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRN 80
+ Q F C A Q++ CQ Y PN ++ I LF+V L +N P +P
Sbjct: 29 STQGFTCPANQSSFPCQTYAFYRASAPNFLDLASIGDLFSVSRLMISKPSNISSPTSPL- 87
Query: 81 FSVPAQKPIKVPIHCICS--NGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
+P Q P+ VP+ C C+ N T +S YT++ + ++ F L YQ +
Sbjct: 88 --IPNQ-PLFVPLSCSCNPINSTSISSANITYTIEAGNTFYIVSTEYFQNLTTYQSVELF 144
Query: 139 NNISNPDLIQIGQNLTIPLPCSCDD---VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDT 195
N P+L+ IG + P+ C C + + N ++V + + + +A FG + +
Sbjct: 145 NPTLIPELLDIGVEVIFPIFCKCPNQTQLQNKVNYLVSYVFQPSDNLSSVASTFGVETQS 204
Query: 196 LMKLNG 201
++ +NG
Sbjct: 205 IVDVNG 210
>gi|422341795|ref|ZP_16422735.1| LysM domain/M23/M37 peptidase domain-containing protein [Treponema
denticola F0402]
gi|449115650|ref|ZP_21752110.1| hypothetical protein HMPREF9726_00095 [Treponema denticola H-22]
gi|325473863|gb|EGC77051.1| LysM domain/M23/M37 peptidase domain-containing protein [Treponema
denticola F0402]
gi|448955136|gb|EMB35903.1| hypothetical protein HMPREF9726_00095 [Treponema denticola H-22]
Length = 301
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC--DDVDNAKV--VHYAHVVEEGSSFALIAQKFG 190
I++ NN+S+P I+IGQ L IP+ S D NAK HV+++G + +A+KFG
Sbjct: 48 ILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTGSEEITHVIQKGDTLYALAKKFG 107
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++KLNG+++ + L G+ L +P
Sbjct: 108 VKFSDILKLNGLNEKTPLKIGQILKIP 134
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL-------KACNSSIK 226
H++E+G + I++K+ T D+++K N + D SK+ G+ L +P+ K N+
Sbjct: 26 HIIEKGDTLYSISKKYNTPIDSILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTG 85
Query: 227 ADSFDNYLRVANGTYTFTANSCVK 250
++ + ++ + Y VK
Sbjct: 86 SEEITHVIQKGDTLYALAKKFGVK 109
>gi|255551969|ref|XP_002517029.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223543664|gb|EEF45192.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 615
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 33 QTAARCQALVGY--LPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIK 90
QT+ CQ Y + PN ++ + LF+V L + + +P + +P Q +
Sbjct: 39 QTSNPCQTYAFYRAMAPNFLDLASVGDLFSVSRL---MISEPSNISSPSSPLIPNQ-SLF 94
Query: 91 VPIHCIC---SNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
VPI C C ++ T +S YT+KKDD ++ T F L YQ + N P L+
Sbjct: 95 VPISCSCRAINSTTNLSYANLSYTIKKDDTFYLVSTTQFQNLTTYQAVQVVNPTLVPTLL 154
Query: 148 QIGQNLTIPLPCSCDD---VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
+IGQ + P+ C C + + N ++V + + +L+A FGT+ +++ +NG
Sbjct: 155 EIGQEVIFPVFCKCPNQTQLQNQVNFMISYVFQPSDNLSLVASSFGTNTQSIVDVNG 211
>gi|386855701|ref|YP_006259878.1| hypothetical protein DGo_CA0493 [Deinococcus gobiensis I-0]
gi|379999230|gb|AFD24420.1| hypothetical protein DGo_CA0493 [Deinococcus gobiensis I-0]
Length = 262
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 33/48 (68%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VYTVK D L IA+ +G ++Y+KI NNISNPDLIQ GQ L IP
Sbjct: 214 VYTVKPGDSLSAIAQKYYGDAMEYKKIAHYNNISNPDLIQPGQRLRIP 261
>gi|220931939|ref|YP_002508847.1| peptidase M23B [Halothermothrix orenii H 168]
gi|219993249|gb|ACL69852.1| peptidase M23B [Halothermothrix orenii H 168]
Length = 274
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VYTVK+ D L IA + +KI+ N I+NPD+I+IGQ + IP+ K
Sbjct: 28 VYTVKRGDTLSKIAHYFDVNI---EKIISLNKINNPDVIRIGQKIKIPV----------K 74
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA--CNSSIK 226
V Y V+ G S IA+KF + TL+K+N I + + AG+ + +P + ++
Sbjct: 75 KVTYQ--VKRGDSLWEIAKKFRVNIKTLIKINQIKNPRVIYAGQKIMIPTNSGEVRYTLA 132
Query: 227 ADSFDNYL 234
+ S+D++
Sbjct: 133 SRSYDSHF 140
>gi|355000258|gb|AER51059.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGTDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|255585150|ref|XP_002533280.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223526905|gb|EEF29112.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 620
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 20 STLSTAQ-----DFKCSAQTAARCQALVGYL--PPNKTTISEIQSLFTVKNLRSILGANN 72
+T TAQ +F CS + CQ V Y PPN + I LF V L SI A+N
Sbjct: 23 TTYVTAQSPQGTNFSCSVDLPSPCQTYVAYYAQPPNFLNLGNISDLFAVSRL-SIASASN 81
Query: 73 FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKY 132
+ + + + VPI C C+ + ++ Y +K D F++ T F L K+
Sbjct: 82 L---VSEDIPLMPNQLLLVPITCGCTGNSSFANIT--YQIKPGDSFYFVSTTYFENLAKW 136
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
Q + N +P L+ G + PL C C + K
Sbjct: 137 QAVESFNPNLDPTLLHPGDKVVFPLFCKCPSKNQMK 172
>gi|355000224|gb|AER51042.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 587
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGTDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000232|gb|AER51046.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGSHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000220|gb|AER51040.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGTDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000254|gb|AER51057.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000246|gb|AER51053.1| Nod-factor receptor 5, partial [Lotus corniculatus]
gi|355000248|gb|AER51054.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000190|gb|AER51025.1| Nod-factor receptor 5, partial [Lotus tenuis]
gi|355000192|gb|AER51026.1| Nod-factor receptor 5, partial [Lotus tenuis]
gi|355000270|gb|AER51065.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000186|gb|AER51023.1| Nod-factor receptor 5 [Lotus filicaulis]
Length = 595
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000250|gb|AER51055.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000222|gb|AER51041.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000262|gb|AER51061.1| Nod-factor receptor 5, partial [Lotus corniculatus]
gi|355000264|gb|AER51062.1| Nod-factor receptor 5, partial [Lotus corniculatus]
gi|355000266|gb|AER51063.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000216|gb|AER51038.1| Nod-factor receptor 5, partial [Lotus corniculatus]
gi|355000276|gb|AER51068.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000188|gb|AER51024.1| Nod-factor receptor 5, partial [Lotus tenuis]
Length = 588
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGSHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPGRVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000252|gb|AER51056.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000236|gb|AER51048.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000244|gb|AER51052.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGSHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPGRVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000238|gb|AER51049.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000226|gb|AER51043.1| Nod-factor receptor 5, partial [Lotus alpinus]
Length = 588
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000242|gb|AER51051.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 587
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|413938261|gb|AFW72812.1| putative lysM-domain receptor-like protein kinase family protein
[Zea mays]
Length = 647
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 21/213 (9%)
Query: 14 TVCAALSTLSTAQDFKCSAQTAARCQALVGY------LPPNKTTISEIQSLFTVKNLRSI 67
TV AA +++ + F CS CQA Y +P N ++ I LF +
Sbjct: 29 TVTAAPASV---EGFNCSVNRTYPCQAYALYRAGFAGVPLN---LAAIGDLFAASRFM-V 81
Query: 68 LGANNFPPGTPRNFSVPAQ-KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIF 126
ANN + PA +P+ VP+ C C +G+ S Y + D I+ T
Sbjct: 82 AHANNLSTA-----AAPATGQPLLVPLQCGCPSGSPNSYAPMQYQIASGDTYWIISTTKL 136
Query: 127 GQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIA 186
L +YQ + N P + +G +T P+ C C + +V++ G +++ IA
Sbjct: 137 QNLTQYQAVERVNPTLVPTNLDVGTMVTFPIFCQCPAAADNATALVTYVMQPGDTYSTIA 196
Query: 187 QKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
F D +L+ LNG ++ A + VPL+
Sbjct: 197 AAFSVDAQSLVSLNGPEPRTQQFA--EILVPLR 227
>gi|227529951|ref|ZP_03960000.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Lactobacillus vaginalis ATCC 49540]
gi|227350136|gb|EEJ40427.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Lactobacillus vaginalis ATCC 49540]
Length = 652
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQ--NLTIPLPCSCDDVDNA 167
YTVK D L IA +G + Y+ + NNISNP+ I +GQ NL S ++
Sbjct: 547 YTVKSGDSLSAIA-ARYG--MSYETLARLNNISNPNRIYVGQTLNLGTSGYTSHHYAASS 603
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
++ ++ G + + IA ++G +TL +LN I D ++++AG+ +
Sbjct: 604 SSNGGSYTIQAGDTLSAIAARYGMSYETLARLNNISDPNRIVAGQRI 650
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 29 KCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQ-- 86
+ S+QT + + + T +QS T+ + + G N + N S P +
Sbjct: 393 QASSQTNTNTSSNTANISSSATGTYTVQSGDTLSGIANKFGTNYESLASLNNISNPNRIY 452
Query: 87 --KPIKVPIHCICSNGTG----VSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN 140
+ +K+ + +N T + YTVK D L IA +G + Y+ + NN
Sbjct: 453 VGQVLKLSANSTTANSTHQVTTSTTSAGSYTVKAGDSLSAIA-ARYG--MSYETLARLNN 509
Query: 141 ISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYA-------HVVEEGSSFALIAQKFGTDR 193
I+NP+ I +GQ L + S V N VV+++ + V+ G S + IA ++G
Sbjct: 510 IANPNRIYVGQVLRLG-SGSTSTVSN--VVNHSTASSAGSYTVKSGDSLSAIAARYGMSY 566
Query: 194 DTLMKLNGIHDDSKLIAGEPLDV 216
+TL +LN I + +++ G+ L++
Sbjct: 567 ETLARLNNISNPNRIYVGQTLNL 589
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEA----NNISNPDLIQIGQNLTIPLPCSCDDVD 165
YTV+ D L IA +Y V N+ISNP+ I +GQ L + S
Sbjct: 348 YTVQSGDTLSGIAN-------RYSTTVNHLASLNDISNPNRIYVGQRLLVRQQASSQTNT 400
Query: 166 N-----AKVVHYA---HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
N A + A + V+ G + + IA KFGT+ ++L LN I + +++ G+ L +
Sbjct: 401 NTSSNTANISSSATGTYTVQSGDTLSGIANKFGTNYESLASLNNISNPNRIYVGQVLKLS 460
>gi|355000272|gb|AER51066.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNFLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGSHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPGRVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPVLIPV 225
>gi|355000240|gb|AER51050.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + +P+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLIPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|356542003|ref|XP_003539461.1| PREDICTED: LOW QUALITY PROTEIN: lysM domain-containing GPI-anchored
protein 1-like [Glycine max]
Length = 197
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 83 VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS 142
+P++ +KVPI C C S Y + + L I + L+ ++ EAN+IS
Sbjct: 62 LPSKLFLKVPISCSCIENIRKSVATH-YKTRPSNTLXSIVDVAYVGLVSSDQLREANSIS 120
Query: 143 NPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
+PD +GQNL +PLPC+C + DN+ ++ ++VV + A++A ++ T LM +N
Sbjct: 121 DPD---VGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDTLAVVAVRYFTTFTDLMNVN 177
Query: 201 GI 202
+
Sbjct: 178 SM 179
>gi|356542007|ref|XP_003539463.1| PREDICTED: LOW QUALITY PROTEIN: lysM domain-containing GPI-anchored
protein 1-like [Glycine max]
Length = 175
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 83 VPAQKPIKVPIHCICSNGTG--VSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN 140
+P + +KVPI C C + V+ Y + D L IA T++ L+ ++ EAN+
Sbjct: 40 LPLKLFLKVPISCSCDDDFHKFVATH---YKTQPSDALXSIADTVYVGLVSSNQLCEANS 96
Query: 141 ISNPDLIQIGQNLTIPLPCSCDDVDNAKV--VHYAHVVEEGSSFALIAQKFGTDRDTLMK 198
ISNPD + QNL +PLPC+ + N + ++ ++VV + ++A ++ T LM
Sbjct: 97 ISNPD---VSQNLIVPLPCTYFNGSNNSLPAIYLSYVVRPVDTLVVVAARYFTTLTYLMN 153
Query: 199 LN-----GIHDDSKLIA 210
+N I+DD L+
Sbjct: 154 VNAMGSTAINDDDILVV 170
>gi|355000234|gb|AER51047.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y + K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCTGNHSSANTS--YQIHKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000230|gb|AER51045.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGTDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ N D P+ +P+
Sbjct: 199 SPADIFTENRYGQDFTAATNLPILIPV 225
>gi|357462213|ref|XP_003601388.1| Receptor-like protein kinase [Medicago truncatula]
gi|355490436|gb|AES71639.1| Receptor-like protein kinase [Medicago truncatula]
Length = 701
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 38 CQALVGYL--PPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHC 95
CQ+ + + PP+ T + I L + I ANN P +P I VP++C
Sbjct: 100 CQSYLTFKSSPPHYNTPATIAYLLN-STVPLIANANNISYVDP----IPTDTMITVPVNC 154
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEANNISNPDLIQIGQNLT 154
CS + YT+K +D F +A + L Q + +A NI + G N+
Sbjct: 155 YCSGHYYQHNSS--YTLKTEDENYFTLANNTYESLTTCQAL-DAQNIYGLTNLTAGLNMH 211
Query: 155 IPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAG 211
+PL C+C ++N ++V EG LIA+ FG D +++ N + +D +
Sbjct: 212 VPLRCACPTSKQIENGFKYILTYLVSEGEYPELIAEIFGVDSQSVLDANKLIEDQVIFYF 271
Query: 212 EPLDVPLK 219
PL VPLK
Sbjct: 272 TPLMVPLK 279
>gi|169832309|ref|YP_001718291.1| peptidase M23B [Candidatus Desulforudis audaxviator MP104C]
gi|169639153|gb|ACA60659.1| peptidase M23B [Candidatus Desulforudis audaxviator MP104C]
Length = 284
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 36/257 (14%)
Query: 61 VKNLRSIL--GANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGL 118
V L S+L G+ +P G + +PA +P + P S+ Y VK+ D L
Sbjct: 8 VTGLASVLLAGSYLYPAGARLDEWIPADRPYEYPAARTLSS---------RYVVKEGDSL 58
Query: 119 DFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEE 178
IA + ++E N+I NPD I+ GQ LT+P + H+V+E
Sbjct: 59 WKIAVE---HRVDVDTLLELNSIRNPDYIRPGQLLTVP------------GIRLQHLVQE 103
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNS-SIKADSFDNYLRVA 237
G + +IA + L++ NG+ + +L G+ L VP+ A ++ A + + L
Sbjct: 104 GENLTVIAVMYRVTVADLVRENGLDNPDRLFPGQRLSVPVHAHGGPAVPAAGWKSLLMPT 163
Query: 238 NGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSI---- 293
G T S + D ++ + P + + G L I
Sbjct: 164 AGHLT----SGFGVREDGQPHYGIDIAADHGAPVRAAEAGRVVFAGPAGTFGLLVILDHG 219
Query: 294 -GNTTTSNNCNRTTCEY 309
G TT +C+ T Y
Sbjct: 220 DGLTTYYAHCSEITVSY 236
>gi|355000204|gb|AER51032.1| Nod-factor receptor 5, partial [Lotus pedunculatus]
gi|355000206|gb|AER51033.1| Nod-factor receptor 5, partial [Lotus pedunculatus]
Length = 588
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGTDFSCPVDSPPSCETYVSYTAQSPNFLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D +FIA T + L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCTGNHSFANTS--YQIQLGDSYNFIATTSYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ ++N NP L+ G + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQDSNPGVNPYLLPEGIKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPVLIPV 225
>gi|355000260|gb|AER51060.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQIGGTDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + +P+ C C+ ++ Y ++K D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLIPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000208|gb|AER51034.1| Nod-factor receptor 5, partial [Lotus pedunculatus]
Length = 588
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGTDFSCPVDSPPSCETYVSYTAQSPNFLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D +FIA T + L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCTGNHSFANTS--YQIQLGDSYNFIATTSYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ ++N NP L+ G + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQDSNPGVNPYLLPEGIKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPVLIPV 225
>gi|371940170|dbj|BAL45522.1| glycoside hydrolase [Bacillus licheniformis]
Length = 317
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 21/124 (16%)
Query: 103 VSDKVPV-----YTVKKDDGLDFIARTIFGQLLKYQKIVEA----NNISNPDLIQIGQNL 153
VS+K PV YTVKK D L IA+ KY V+A NNI +P+ I +GQ L
Sbjct: 206 VSNKKPVKTETVYTVKKGDALSVIAK-------KYNTTVKALQSLNNIKDPNKIYVGQKL 258
Query: 154 TIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
I S N K Y + ++ G + + I+++F T TL NGI + +K+ AG+
Sbjct: 259 KIS--SSASTASNKK--QY-YTIKSGDTLSGISKRFNTSIKTLQNWNGIKNANKIYAGQK 313
Query: 214 LDVP 217
+ V
Sbjct: 314 IRVK 317
>gi|315455199|emb|CAZ66917.1| Nod-factor receptor 5 [Lotus pedunculatus]
Length = 595
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGTDFSCPVDSPPSCETYVSYTAQSPNFLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D +FIA T + L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCTGNHSFANTS--YQIQLGDSYNFIATTSYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ ++N NP L+ G + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQDSNPGVNPYLLPEGIKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPVLIPV 225
>gi|15805913|ref|NP_294612.1| hypothetical protein DR_0888 [Deinococcus radiodurans R1]
gi|32363430|sp|Q9RVY3.1|Y888_DEIRA RecName: Full=Uncharacterized protein DR_0888
gi|6458609|gb|AAF10467.1|AE001941_20 hypothetical protein DR_0888 [Deinococcus radiodurans R1]
Length = 253
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 32/48 (66%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VYTVK D L IA +G ++Y+KI NNISNPDLIQ GQ L IP
Sbjct: 205 VYTVKPGDSLSKIAEHYYGDQMEYKKIAHYNNISNPDLIQPGQKLRIP 252
>gi|357518439|ref|XP_003629508.1| LysM-domain containing receptor-like kinase [Medicago truncatula]
gi|355523530|gb|AET03984.1| LysM-domain containing receptor-like kinase [Medicago truncatula]
Length = 590
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 10 LLLFTVCAALSTLSTA--QDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLR 65
L+ F+ L L A ++F C+ ++ C V Y PN T++ I +F +
Sbjct: 9 LIFFSATHILLQLPQANGKNFSCTLNSSPSCDTYVAYFANSPNFLTLTAISDIFDTSP-Q 67
Query: 66 SILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTI 125
SI A+N N ++ + + +PI C C+ S + +K+ + +++
Sbjct: 68 SIARASNIKD---ENMNLIHGQLLLIPITCGCNGNGNYSFANISHLIKESESYYYLSTIS 124
Query: 126 FGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHY--AHVVEEGSSFA 183
+ L +Q + ++N NP L++IG + IPL C C AK + Y +V + +
Sbjct: 125 YQNLTNWQTVEDSNPNLNPYLLKIGTKINIPLFCRCPSNYFAKGIEYLITYVWQPNDNLT 184
Query: 184 LIAQKFGTDRDTLMKLN 200
L+A K G ++ N
Sbjct: 185 LVASKLGASPKDIITAN 201
>gi|355000274|gb|AER51067.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 27 DFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVP 84
DF C + C+ V Y PN +++ I +F + L SI A+N G ++ VP
Sbjct: 35 DFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNIDAG--KDKLVP 91
Query: 85 AQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
Q + VP+ C C+ ++ Y ++K D DF+A T++ L + + +N NP
Sbjct: 92 GQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNIVQASNPGVNP 148
Query: 145 DLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
L+ + PL C C + K + Y +V + + +L++ KFG ++ N
Sbjct: 149 YLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGASPADILTENR 208
Query: 202 IHDDSKLIAGEPLDVPL 218
D P+ +P+
Sbjct: 209 YGQDFTAATNLPILIPV 225
>gi|355000228|gb|AER51044.1| Nod-factor receptor 5, partial [Lotus alpinus]
Length = 588
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 27 DFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVP 84
DF C + C+ V Y PN +++ I +F + L SI A+N G ++ VP
Sbjct: 35 DFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNIDAG--KDKLVP 91
Query: 85 AQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
Q + VP+ C C+ ++ Y ++K D DF+A T++ L + + +N NP
Sbjct: 92 GQV-LLVPVTCGCAGNHSSANTS--YQIQKGDSYDFVATTLYENLTNWNIVQASNPGVNP 148
Query: 145 DLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
L+ + PL C C + K + Y +V + + +L++ KFG ++ N
Sbjct: 149 YLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGASPADILTENR 208
Query: 202 IHDDSKLIAGEPLDVPL 218
D P+ +P+
Sbjct: 209 YGQDFTAATNLPILIPV 225
>gi|449128385|ref|ZP_21764631.1| hypothetical protein HMPREF9733_02034 [Treponema denticola SP33]
gi|448940793|gb|EMB21697.1| hypothetical protein HMPREF9733_02034 [Treponema denticola SP33]
Length = 301
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC--DDVDNAKV--VHYAHVVEEGSSFALIAQKFG 190
I++ NN+S+P I+IGQ L IP+ S D N K HV+++G + +A+KFG
Sbjct: 48 ILKKNNLSDPSKIKIGQKLIIPVGSSEKNDKKTNTKTNSEELTHVIQKGDTLYALAKKFG 107
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++KLNG+++ + L G+ L +P
Sbjct: 108 VKFSDILKLNGLNEKTPLKIGQILKIP 134
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL-------KACNSSIK 226
H++E+G + I++K+ T D+++K N + D SK+ G+ L +P+ K N+
Sbjct: 26 HIIEKGDTLYSISKKYNTSVDSILKKNNLSDPSKIKIGQKLIIPVGSSEKNDKKTNTKTN 85
Query: 227 ADSFDNYLRVANGTYTFTANSCVK 250
++ + ++ + Y VK
Sbjct: 86 SEELTHVIQKGDTLYALAKKFGVK 109
>gi|292490505|ref|YP_003525944.1| lytic transglycosylase [Nitrosococcus halophilus Nc4]
gi|291579100|gb|ADE13557.1| Lytic transglycosylase catalytic [Nitrosococcus halophilus Nc4]
Length = 722
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 130 LKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKF 189
+K +++VE N +SN I++GQ L +PLP D HY V+ G + + IA++F
Sbjct: 409 IKLRQLVELNGLSNRHHIRVGQVLQLPLPA-----DGLPTGHY--TVQRGDTLSGIARRF 461
Query: 190 GTDRDTLMKLNGIHDDSKLIAGEPLDV 216
G L+K+NGI + ++ AG+ L +
Sbjct: 462 GITEQALLKINGITNKHRIYAGQNLRL 488
>gi|355000210|gb|AER51035.1| Nod-factor receptor 5, partial [Lotus pedunculatus]
gi|355000212|gb|AER51036.1| Nod-factor receptor 5, partial [Lotus pedunculatus]
Length = 588
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGTDFSCPVDSPPSCETYVSYTAQSPNFLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D +F+A T + L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCTGNHSFANTS--YQIQLGDSYNFVATTSYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ ++N NP L+ G + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQDSNPGVNPYLLPEGIKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPVLIPV 225
>gi|429765336|ref|ZP_19297635.1| glycosyl hydrolase family 25 [Clostridium celatum DSM 1785]
gi|429186616|gb|EKY27554.1| glycosyl hydrolase family 25 [Clostridium celatum DSM 1785]
Length = 439
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
V Y V+ D L IA FG Q++V+ N+ISNP+LI +GQ L I DN
Sbjct: 216 VKYYIVRSGDTLSKIASR-FGTTT--QELVKLNDISNPNLIYVGQVLKIYTNRQVQKDDN 272
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP-LKACNSSI 225
+VV G + + IA +FGT L+KLN I + + + GE L +P + + S
Sbjct: 273 N--FSSTYVVVAGDTLSKIASRFGTTTQELVKLNDISNPNLIYVGEILKIPVINSVKSGA 330
Query: 226 KADSFDNYLRVANG 239
+ + + V NG
Sbjct: 331 SSKQYQSTYVVQNG 344
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V D L IA FG Q++V+ N+ISNP+LI +G+ L IP+ S ++K
Sbjct: 278 YVVVAGDTLSKIASR-FGTTT--QELVKLNDISNPNLIYVGEILKIPVINSVKSGASSKQ 334
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+VV+ G + + IA +F T L ++NGI + + + G+ L +
Sbjct: 335 YQSTYVVQNGDTLSKIASRFDTTVQYLARINGIKNPNLIYTGQVLKIE 382
>gi|290490576|dbj|BAI79275.1| LysM type receptor kinase [Lotus japonicus]
gi|290490596|dbj|BAI79285.1| LysM type receptor kinase [Lotus japonicus]
Length = 591
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 14/221 (6%)
Query: 6 LKLVLLLFTVCAALSTLS--TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTV 61
L L++ T L+ LS +F C + C V Y PN T++ I LF
Sbjct: 13 LALMMFFSTTHHILAQLSHTNGTNFSCPVDSPPSCDTYVTYFAQSPNFLTLTSISDLFDT 72
Query: 62 KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI 121
L SI A+N +N VP Q + VP+ C CS S+ + +K+ + ++
Sbjct: 73 SPL-SIARASNIKDEN-QNL-VPGQL-LLVPVTCACSGSNSFSN--ISHMIKEGESYYYL 126
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNAKVVHY--AHVVEE 178
+ T + L ++ + ++N NP L+ +G + IPL C C + K + Y +V
Sbjct: 127 STTSYENLTNWETVQDSNPNYNPYLLPVGIKVVIPLFCKCPSNYHLNKGIEYLITYVWHN 186
Query: 179 GSSFALIAQKFG-TDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +L+A KFG + +D + + N H + P+ +P+
Sbjct: 187 NDNVSLVASKFGVSTQDIISENNFSHQNFTAATNFPILIPV 227
>gi|262195395|ref|YP_003266604.1| peptidoglycan-binding lysin domain-containing protein [Haliangium
ochraceum DSM 14365]
gi|262078742|gb|ACY14711.1| Peptidoglycan-binding lysin domain protein [Haliangium ochraceum
DSM 14365]
Length = 954
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPC---------S 160
YTVK D L IA + G ++++I N I+NP +++GQ L +P S
Sbjct: 631 YTVKSGDTLSAIAGRLLGDQDRWREIATLNGITNPRALRVGQVLQVPSSSESAAPEGGQS 690
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKF--GTDR-DTLMKLNGIHDDSKLIAGEPLDVP 217
+ A V A+VV G + IA +F T+R + LNGI D +L G+ L +P
Sbjct: 691 EPEAPAAAPVETAYVVRSGDTLGSIAARFLGSTNRWREIATLNGISDPRRLSVGQRLRIP 750
Query: 218 LKACNSS 224
+
Sbjct: 751 TGGAQQA 757
>gi|355000214|gb|AER51037.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQLGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SSADILTENRYGQDFTAATNLPILIPV 225
>gi|225571199|ref|ZP_03780197.1| hypothetical protein CLOHYLEM_07287 [Clostridium hylemonae DSM
15053]
gi|225160030|gb|EEG72649.1| hypothetical protein CLOHYLEM_07287 [Clostridium hylemonae DSM
15053]
Length = 325
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
V +YTVK D L IA +G YQ + NNI NP+LI GQ + IP V +
Sbjct: 226 VIIYTVKPGDNLSSIAAR-YG--TTYQTLASYNNIENPNLIYAGQKIRIP-------VGH 275
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ + ++ G + + IA +FGT L +LNGI + + + AG + V
Sbjct: 276 YETSARYYTIKSGDTLSGIALRFGTTVAELQRLNGIQNPNLIYAGTTIRV 325
>gi|357493275|ref|XP_003616926.1| Wall-associated receptor kinase-like protein [Medicago truncatula]
gi|355518261|gb|AES99884.1| Wall-associated receptor kinase-like protein [Medicago truncatula]
Length = 715
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEANN 140
++P I VPI+C CSN YT++ F +A + L Q ++ A N
Sbjct: 93 TLPTDTIITVPINCTCSNNNTYYQHNTSYTIQNTGETYFTVANNTYQALSTCQALI-AQN 151
Query: 141 ISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLM 197
N I G NLT+PL C+C D ++V EG S + IA+ F D ++
Sbjct: 152 PYNERKIVRGNNLTVPLRCACPTKKQSDEGFKYLLTYLVSEGESVSSIAEIFNVDPQSIN 211
Query: 198 KLNGIHDDSKLIAGEPLDVPLK 219
+ N + S + PL +PLK
Sbjct: 212 EANELSSTSFIFYFTPLLIPLK 233
>gi|355000256|gb|AER51058.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQLGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|37651074|emb|CAE02597.1| Nod-factor receptor 5 [Lotus japonicus]
gi|37651076|emb|CAE02598.1| Nod-factor receptor 5 [Lotus japonicus]
gi|355000194|gb|AER51027.1| Nod-factor receptor 5 [Lotus japonicus]
gi|357394668|gb|AET75796.1| NFR5 [Cloning vector pHUGE-LjMtNFS]
Length = 595
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQLGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000184|gb|AER51022.1| Nod-factor receptor 5 [Lotus burttii]
gi|355000196|gb|AER51028.1| Nod-factor receptor 5 [Lotus japonicus]
gi|355000198|gb|AER51029.1| Nod-factor receptor 5 [Lotus japonicus]
Length = 595
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQLGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|355000268|gb|AER51064.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEQISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQLGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|406964799|gb|EKD90502.1| N-acetylmuramoyl-L-alanine amidase [uncultured bacterium]
Length = 245
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV++ D L I+ +G +++YQKI +ANNI NP+LI+IGQ L +P
Sbjct: 198 YTVQQGDWLSTISGRAYGDIMQYQKIAQANNIQNPNLIEIGQTLKLP 244
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTVK+ D L IA+ + KY ++V+AN + N D I GQ + IP
Sbjct: 93 YTVKEGDTLFSIAQNYYDDGYKYPELVKANELENEDQISAGQVIKIP 139
>gi|355000218|gb|AER51039.1| Nod-factor receptor 5, partial [Lotus corniculatus]
Length = 588
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 17 AALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFP 74
AA S + DF C + C+ V Y PN +++ I +F + L SI A+N
Sbjct: 25 AARSEKISGPDFSCPVDSPPSCETYVTYTAQSPNLLSLTNISDIFDISPL-SIARASNID 83
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
G ++ VP Q + VP+ C C+ ++ Y ++ D DF+A T++ L +
Sbjct: 84 AG--KDKLVPGQV-LLVPVTCGCAGNHSSANTS--YQIQLGDSYDFVATTLYENLTNWNI 138
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGT 191
+ +N NP L+ + PL C C + K + Y +V + + +L++ KFG
Sbjct: 139 VQASNPGVNPYLLPERVKVVFPLFCRCPSKNQLNKGIQYLITYVWKPNDNVSLVSAKFGA 198
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ N D P+ +P+
Sbjct: 199 SPADILTENRYGQDFTAATNLPILIPV 225
>gi|255539382|ref|XP_002510756.1| kinase, putative [Ricinus communis]
gi|223551457|gb|EEF52943.1| kinase, putative [Ricinus communis]
Length = 634
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGY--LPPNKTTISEIQSLFTVKNLRSILGA-NNFPPGTPRN 80
T + F+C+ ++ CQ+ + + PP TT I LF++++ S++ + NN
Sbjct: 44 TTKGFECNGLRSS-CQSYLTFRSAPPYYTTPVTISYLFSLQDSASLIASLNNISSDVS-- 100
Query: 81 FSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEAN 139
S+P Q + +P++C C G YT+K F +A + L Q ++ N
Sbjct: 101 -SIPPQSQLFIPVNCSCFGGQFYQHNAS-YTLKFSSETYFSVANDTYQGLSTCQALMSQN 158
Query: 140 NISNPDLIQIGQNLTIPLPCSCDDVDNAKV-VHY--AHVVEEGSSFALIAQKFGTDRDTL 196
+ +L +G L +PL C+C + + Y ++V G + + IA+ FG ++
Sbjct: 159 PYGDRNL-SVGMRLQVPLRCACPTSNQTALGFRYLLTYMVTWGDTISSIAELFGVRPQSI 217
Query: 197 MKLNGIHDDSKLIAGEPLDVPLKACNSSIKA 227
+ N + S + P+ VPL ++IKA
Sbjct: 218 LDANQLSSTSIIFPFTPILVPLTTPPTTIKA 248
>gi|290490590|dbj|BAI79282.1| LysM type receptor kinase [Lotus japonicus]
Length = 486
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 80 NFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN 139
N +P+ K + VP+ C CS G P YTV K+D + +T + L Q ++ N
Sbjct: 94 NDKIPSNKSVIVPVFCSCS-GNIYQHSTP-YTVVKNDTYYMLVKTTYQGLTTCQAMMGQN 151
Query: 140 NISNPDLIQIGQNLTIPLPCSCDDVD-NAKVVHY--AHVVEEGSSFALIAQKFGTDRDTL 196
+ I +G LT+P+ C+C + K V + H+V +G + I + +G D ++
Sbjct: 152 YYAAVS-IAVGAELTVPVLCACPTSNLTTKGVSFLLVHMVRDGETVKSIGEAYGVDEQSM 210
Query: 197 MKLNGI-------HDDSKLIAGEPLDVPLKACNSSIKADSF 230
+ NG+ ++ L A P+ VPL+ + D F
Sbjct: 211 GEANGLPVVPSSANNSVILNALTPILVPLRGQSCKENPDKF 251
>gi|357507635|ref|XP_003624106.1| Wall-associated receptor kinase-like protein [Medicago truncatula]
gi|87162780|gb|ABD28575.1| Protein kinase [Medicago truncatula]
gi|355499121|gb|AES80324.1| Wall-associated receptor kinase-like protein [Medicago truncatula]
Length = 679
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 78 PRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVE 137
P N +P+ K I VP+ C C + Y+VK++D + + + L Q ++
Sbjct: 91 PLNEKIPSNKSIIVPVFCSCDG--NIYQHSTSYSVKQNDTYYELVKETYQGLTTCQALM- 147
Query: 138 ANNISNPDLIQIGQNLTIPLPCSCDDVD-NAKVVH--YAHVVEEGSSFALIAQKFGTDRD 194
N P IQ+ LT+P+ C+C + AK V H+V G + I + +G D
Sbjct: 148 GQNYYAPVSIQLDAELTVPILCACPTANLTAKGVTSLLVHMVNYGETVKSIGEAYGVDEH 207
Query: 195 TLM---KLNGIHDDSK---LIAGEPLDVPLKACNSSIKADSF 230
++ +L+G+ + L A P+ VPL+ N +D F
Sbjct: 208 SMREANELSGLQSANSSVILFASTPILVPLRRKNCKENSDRF 249
>gi|325295360|ref|YP_004281874.1| peptidase M23 [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065808|gb|ADY73815.1| Peptidase M23 [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 343
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK+ D + IA+ +G +K I++ANN+ P +I++GQ L IP + K
Sbjct: 23 YVVKRGDSIAKIAKN-YGVSVK--DIIKANNLKRPYIIRVGQKLKIPNKSRRIE---KKF 76
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
V+Y V++G S + IA++F T L+K+N + + G+ L VP+K
Sbjct: 77 VYYT--VKKGDSLSKIAKRFRTSIKKLIKINNLKKPYIIRPGQKLKVPVKKS 126
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 40 ALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSN 99
A + Y+ +I++I + V +++ I+ ANN R + + + +K+P +
Sbjct: 19 ADITYVVKRGDSIAKIAKNYGV-SVKDIIKANNLK----RPYIIRVGQKLKIP-----NK 68
Query: 100 GTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPC 159
+ K YTVKK D L IA+ + +K+++ NN+ P +I+ GQ L +P+
Sbjct: 69 SRRIEKKFVYYTVKKGDSLSKIAKRFRTSI---KKLIKINNLKKPYIIRPGQKLKVPVKK 125
Query: 160 SCDDVDN---------------------AKV-VHYAHVVEEGSSFALIAQKFGTDRDTLM 197
S N +KV V+ + V +G S IA+KF ++
Sbjct: 126 SYLVKRNLKKKSSKKKKNSQFVYKSSLLSKVPVYKYYRVRKGDSVLKIAKKFRVSPRMII 185
Query: 198 KLNGIHDDSKLIAGEPLDV 216
+ N + L G+ L +
Sbjct: 186 RENHLRKPYILRPGQKLKI 204
>gi|77166435|ref|YP_344960.1| lytic transglycosylase [Nitrosococcus oceani ATCC 19707]
gi|254436204|ref|ZP_05049711.1| LysM domain protein [Nitrosococcus oceani AFC27]
gi|76884749|gb|ABA59430.1| Lytic transglycosylase [Nitrosococcus oceani ATCC 19707]
gi|207089315|gb|EDZ66587.1| LysM domain protein [Nitrosococcus oceani AFC27]
Length = 503
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD-NAK 168
+ V++ L IAR + ++V+ N ++N I++GQ L +P P + + +K
Sbjct: 392 HKVQQGQTLSHIARRY---RINVHQLVKLNGLTNRHHIRMGQTLQLPFPATANRNHIRSK 448
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
HY V+ G + + IAQ+FG + L+K N I D ++ AG+ L
Sbjct: 449 TGHY--TVQRGDTLSRIAQRFGMTQQALLKSNDITDKHRIYAGQNL 492
>gi|402077044|gb|EJT72393.1| intracellular hyphae protein 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 181
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL-PCSCDDV---- 164
YTV DD L I++ + + IV+A+N+ NP+ I++G+ L +P PC D+V
Sbjct: 64 YTVVSDDTLTTISQKMQSGICN---IVKASNLQNPNFIKLGEVLKVPTNPCKLDNVSCLA 120
Query: 165 ---DNAKVVHYA---HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+N V + + G +F L+AQKF D + L+K N D L G+ + VP+
Sbjct: 121 KPTENLSCVKGGASTYTIASGDTFFLVAQKFNLDVNALLKANQGVDPLLLEVGQTIKVPV 180
>gi|351589819|gb|AEQ49630.1| Nod-factor receptor 5, partial [Galega officinalis]
Length = 283
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 4 FQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTV 61
F L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 13 FFLALMLFLTNISAQSQQLSRT-NFSCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDI 71
Query: 62 KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI 121
+L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I
Sbjct: 72 SSL-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTGNRSFANIS--YSIKTDDYYKLI 124
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEE 178
+ T+F L Y ++ AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 125 STTLFQNLTNYLEMEAANPNLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKA 184
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ L++ KFG + ++ N + L P+ +P+
Sbjct: 185 NDNITLVSSKFGASQGDMLTQNNFTAAANL----PIVIPV 220
>gi|254430507|ref|ZP_05044210.1| alginate regulatory protein AlgP [Cyanobium sp. PCC 7001]
gi|197624960|gb|EDY37519.1| alginate regulatory protein AlgP [Cyanobium sp. PCC 7001]
Length = 521
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK + L IA T F +++++ N +SNPDL+ G L IP +
Sbjct: 149 YTVKSGETLSDIA-TRFD--TTPERLIQINGLSNPDLLLAGSRLRIPSRPGSAAAPRSAA 205
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAG 211
HVV G S IA+++GT + L+ LN + D + AG
Sbjct: 206 SAKEHVVSPGESLGAIAERYGTSVERLVALNNVEDPDVVHAG 247
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 134 KIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDR 193
++++AN ISNPD ++ GQ L IP V V+ G + + IA++ G
Sbjct: 49 RLMQANGISNPDHVEAGQTLVIPGGARRTTTSRGASV----TVQPGETLSEIAEREGVSM 104
Query: 194 DTLMKLNGIHDDSKLIAGEPLDVP 217
L + NG+ + ++ G+ L +P
Sbjct: 105 SQLQQANGLGNADLVMVGQRLVIP 128
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP---LPCSCDDVDNA 167
TV+ + L IA + + ++ +AN + N DL+ +GQ L IP +
Sbjct: 86 TVQPGETLSEIAER---EGVSMSQLQQANGLGNADLVMVGQRLVIPGRARSAAAAATTAR 142
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+ + V+ G + + IA +F T + L+++NG+ + L+AG L +P +
Sbjct: 143 AMPTAPYTVKSGETLSDIATRFDTTPERLIQINGLSNPDLLLAGSRLRIPSR 194
>gi|255547604|ref|XP_002514859.1| conserved hypothetical protein [Ricinus communis]
gi|223545910|gb|EEF47413.1| conserved hypothetical protein [Ricinus communis]
Length = 541
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 81 FSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEAN 139
F+ ++K I VPI C C+ + + Y ++ F IA + L Q I++ N
Sbjct: 40 FTFLSEKSIIVPISCSCT--SSIYHHNTSYFIQDSTDTYFTIANNTYQGLTTCQAIMDQN 97
Query: 140 NISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTL 196
N + L +G L +PL C+C + +N + H+V G + A IA FG D ++
Sbjct: 98 NYPSQGL-PVGSELIVPLRCACPTQNQTENGVISLLVHMVTWGDTIASIANSFGVDEASI 156
Query: 197 MKLNGIHDDSKLIAGEPLDVPL 218
+ N + ++S + P+ VPL
Sbjct: 157 LAANKLSENSTIYPFTPILVPL 178
>gi|168019734|ref|XP_001762399.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686477|gb|EDQ72866.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 51 TISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVY 110
T+ +I +LF N R +GA N P T NF + P+ +P C C N + Y
Sbjct: 59 TLVKIGTLFQTTNER--IGAVN-PVITDLNF-IDQNVPLYIPFRCDCINDQLLQKFQ--Y 112
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDD----VDN 166
V+ D ++ I ++ L + + N+IS+P+ ++ + L IP+ CSC + D
Sbjct: 113 QVQATDTIENITAIVYENLTQLNWVTGLNSISDPNYVETDRFLVIPVNCSCGNPTVSSDY 172
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
+ Y V G + + IA +F D + KLN
Sbjct: 173 GLFLTYPVVAGTGGNLSGIASEFNASEDLVRKLN 206
>gi|325840871|ref|ZP_08167206.1| glycosyl hydrolase family 25 [Turicibacter sp. HGF1]
gi|325490128|gb|EGC92466.1| glycosyl hydrolase family 25 [Turicibacter sp. HGF1]
Length = 451
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK D L IA +G + ++V+ N+ISNP++I +G+ L +P S V
Sbjct: 246 YVVKAGDTLWAIANK-YGTTV--SELVKLNDISNPNVIYVGEVLQMPGESSG-------V 295
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP-----LKACNSS 224
+ V+ G + IA K+GT L+KLN I D S + GE L +P ++A +
Sbjct: 296 ETTEYTVKAGDTLWAIANKYGTTVSELVKLNDISDPSVIYVGEVLQMPGESSGVEATEYT 355
Query: 225 IKADSFDNYLRVANGTYTFTANSCVKC 251
+KA D +AN Y T + VK
Sbjct: 356 VKAG--DTLWGIAN-KYGTTVSELVKL 379
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA +G + ++V+ N+ISNP++I +G+ L IP S V
Sbjct: 354 YTVKAGDTLWGIANK-YGTTV--SELVKLNDISNPNVIYVGEVLQIPGESSG-------V 403
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
+ V+ G + IA K+GT L+KLNGI + + + G+ L
Sbjct: 404 EATEYTVKAGDTLWGIATKYGTTVSELVKLNGITNPNMIYVGKAL 448
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA +G + ++V+ N+IS+P +I +G+ L +P S V
Sbjct: 300 YTVKAGDTLWAIANK-YGTTV--SELVKLNDISDPSVIYVGEVLQMPGESSG-------V 349
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP-----LKACNSS 224
+ V+ G + IA K+GT L+KLN I + + + GE L +P ++A +
Sbjct: 350 EATEYTVKAGDTLWGIANKYGTTVSELVKLNDISNPNVIYVGEVLQIPGESSGVEATEYT 409
Query: 225 IKA 227
+KA
Sbjct: 410 VKA 412
>gi|351589805|gb|AEQ49623.1| Nod-factor receptor 5, partial [Galega officinalis]
gi|351589807|gb|AEQ49624.1| Nod-factor receptor 5, partial [Galega officinalis]
Length = 283
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 4 FQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTV 61
F L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 13 FFLALMLFLTNISAQSQQLSRT-NFSCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDI 71
Query: 62 KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI 121
+L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I
Sbjct: 72 SSL-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTGNRSFANIS--YSIKTDDYYKLI 124
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEE 178
+ T+F L Y ++ AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 125 STTLFQNLTNYLEMEAANPNLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKA 184
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ L++ KFG + ++ N + L P+ +P+
Sbjct: 185 NDNITLVSSKFGASQGDMLTQNNFTAAANL----PILIPV 220
>gi|290490602|dbj|BAI79288.1| LysM type receptor kinase [Lotus japonicus]
Length = 678
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 80 NFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN 139
N +P K + VP+ C CS G P YTV K+D + +T + L Q ++ N
Sbjct: 94 NGKIPTNKSVIVPVFCSCS-GNIYQHSTP-YTVVKNDTYYMLVKTTYQGLTTCQAMMGQN 151
Query: 140 NISNPDLIQIGQNLTIPLPCSCDDVD-NAKVVHY--AHVVEEGSSFALIAQKFGTDRDTL 196
+ I +G LT+P+ C+C + AK V + H+V +G I + +G D ++
Sbjct: 152 YYAAVS-IAVGAELTVPVLCACPTSNLIAKGVSFLLVHMVRDGEMVNSIGEAYGVDEQSM 210
Query: 197 MKLNGI-------HDDSKLIAGEPLDVPLKACNSSIKADSF 230
+ NG+ ++ L A P+ VPL+ + D F
Sbjct: 211 REANGLPVVPSSANNSVTLNALTPILVPLRGQSCKENPDKF 251
>gi|290490588|dbj|BAI79281.1| LysM type receptor kinase [Lotus japonicus]
Length = 678
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 80 NFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN 139
N +P K + VP+ C CS G P YTV K+D + +T + L Q ++ N
Sbjct: 94 NGKIPTNKSVIVPVFCSCS-GNIYQHSTP-YTVVKNDTYYMLVKTTYQGLTTCQAMMGQN 151
Query: 140 NISNPDLIQIGQNLTIPLPCSCDDVD-NAKVVHY--AHVVEEGSSFALIAQKFGTDRDTL 196
+ I +G LT+P+ C+C + AK V + H+V +G I + +G D ++
Sbjct: 152 YYAAVS-IAVGAELTVPVLCACPTSNLIAKGVSFLLVHMVRDGEMVNSIGEAYGVDEQSM 210
Query: 197 MKLNGI-------HDDSKLIAGEPLDVPLKACNSSIKADSF 230
+ NG+ ++ L A P+ VPL+ + D F
Sbjct: 211 REANGLPVVPSSANNSVTLNALTPILVPLRGQSCKENPDKF 251
>gi|359491196|ref|XP_002276830.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At1g53420-like [Vitis vinifera]
Length = 604
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 20/191 (10%)
Query: 38 CQALVGYLPP-NKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCI 96
CQ + Y N T+S I SLF N+ + NN N P Q+ I +P+ C
Sbjct: 36 CQTYIVYRAQHNFRTLSSISSLFNA-NISELFTTNNMVEANSSNLR-PGQE-IIIPVTCS 92
Query: 97 CSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQN---L 153
C + S+ + +Y D L IA T+F L+K Q ++E NPD G N L
Sbjct: 93 CPDR--FSEAMFIYNCSHSDSLLIIACTVFEGLVKAQSLIE----ENPDF--GGDNPGDL 144
Query: 154 TIPLPCSCD-----DVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKL 208
TI +P C + DN + V +G S L+A+KFG + + N + + +
Sbjct: 145 TIKVPVRCACLAKFERDNGVRYLVTYPVIQGDSTDLMARKFGVPEEMIRAANKLDRYAAI 204
Query: 209 IAGEPLDVPLK 219
L +P K
Sbjct: 205 YPQTTLLIPTK 215
>gi|351589815|gb|AEQ49628.1| Nod-factor receptor 5, partial [Galega officinalis]
Length = 283
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 4 FQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTV 61
F L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 13 FFLALMLFLTDISAQSQQLSRT-NFSCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDI 71
Query: 62 KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI 121
+L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I
Sbjct: 72 SSL-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTGNRSFANIS--YSIKTDDYYKLI 124
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEE 178
+ T+F L Y ++ AN NP+L+ + + +PL C C + K + Y +V +
Sbjct: 125 STTLFQNLTNYLEMEAANPNLNPNLLPLDAKVVVPLFCRCPSKNQLNKGIKYLITYVWKA 184
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ L++ KFG + ++ N + L P+ +P+
Sbjct: 185 NDNITLVSSKFGASQGDMLTQNNFTAAANL----PILIPV 220
>gi|259502220|ref|ZP_05745122.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus antri DSM 16041]
gi|259169838|gb|EEW54333.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus antri DSM 16041]
Length = 615
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI------PLPCSCDD 163
YTV+ D L IA + FG + Y ++ + NNI+NP+ I +GQ L + P+
Sbjct: 446 YTVQSGDTLSGIA-SQFG--MSYSQLAQINNIANPNRIYVGQVLRVGGTQSTPVNTVSQP 502
Query: 164 VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNS 223
N ++ V+ G + + IA + G + L + NGI + +++ G+ L V
Sbjct: 503 RHNNASASGSYTVQSGDTLSGIASRLGVSYEQLAQSNGIANPNRIYVGQVLRV------- 555
Query: 224 SIKADSFDNYLRVANGTYT 242
S +A S+ A G YT
Sbjct: 556 SGQATSYQAPAAAARGGYT 574
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 82/190 (43%), Gaps = 29/190 (15%)
Query: 44 YLPPNKTTISEIQSLF-----TVKNLRSILGANNFPPGTP---RNFSVPAQKPIKVPIHC 95
Y N T+S I + F T+ +L I N G R S PA V H
Sbjct: 311 YTVQNGDTLSGIANQFSTTVNTLAHLNDIQNVNQIYVGQRLLVRQASQPATPSQPVVNHN 370
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQ---- 151
SN S YTV+ D L IA + FG + Y ++ + NNI+NP+ I +GQ
Sbjct: 371 QQSNNGQSS-----YTVQSGDTLSGIA-SQFG--MNYSQLAQINNIANPNQIYVGQVLQL 422
Query: 152 -----NLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
N T P + NA ++ V+ G + + IA +FG L ++N I + +
Sbjct: 423 RAAAVNHTTTTPTNS----NANTGASSYTVQSGDTLSGIASQFGMSYSQLAQINNIANPN 478
Query: 207 KLIAGEPLDV 216
++ G+ L V
Sbjct: 479 RIYVGQVLRV 488
>gi|356569523|ref|XP_003552949.1| PREDICTED: LOW QUALITY PROTEIN: lysM domain-containing GPI-anchored
protein 1-like [Glycine max]
Length = 164
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 83 VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS 142
+P++ +KVPI C + S + Y + D L I ++ L+ + ++ E N+IS
Sbjct: 38 LPSKFFLKVPISYSCVDDICKSVAIH-YKTRPSDTLXSIVDVVYAGLVSFDQLREVNSIS 96
Query: 143 NPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
+PD +GQNL +PLPC+C + DN+ ++ ++ V + +IA ++ M +N
Sbjct: 97 DPD---VGQNLIVPLPCTCFNGSDNSLPAIYLSYAVRPVDTLVVIAARYFITLTDSMNVN 153
Query: 201 GI 202
+
Sbjct: 154 AM 155
>gi|325264310|ref|ZP_08131041.1| putative endolysin [Clostridium sp. D5]
gi|324030381|gb|EGB91665.1| putative endolysin [Clostridium sp. D5]
Length = 323
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+ D L IA +G YQ + N I+NP+LI GQ + IP D
Sbjct: 227 YVVQPGDTLSGIAAR-YG--TTYQTLAALNGITNPNLIYAGQTIRIP-------EDGTST 276
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
Y + ++ G + + IAQKFGT L +LNGI + + + AG + +
Sbjct: 277 ARY-YTIQSGDTLSGIAQKFGTTVSELQRLNGISNPNLIYAGNTIRI 322
>gi|226315069|ref|YP_002774965.1| hypothetical protein BBR47_54840 [Brevibacillus brevis NBRC 100599]
gi|226098019|dbj|BAH46461.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 300
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 17/122 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY V++ D L IA+ +G LK +VEAN+I+NP L+ +G L I D+V
Sbjct: 48 VYAVRQGDTLSSIAQR-YGLSLK--NLVEANSITNPHLLSVGMKLII----KRDEV---- 96
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD--DSKLIAGEPLDVPLKACNSSIK 226
H+V++G + IA+++G R++L++ N + L G+ + VP+ N +
Sbjct: 97 ----GHMVKQGETLDYIARRYGVSRESLIERNPLLKWLSDNLYVGQVVYVPIAKGNPMLG 152
Query: 227 AD 228
D
Sbjct: 153 ND 154
>gi|356566933|ref|XP_003551679.1| PREDICTED: wall-associated receptor kinase-like 2-like [Glycine
max]
Length = 667
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
RN +P+ K I VP+ C CS G P YT K+D + + F L Q ++
Sbjct: 93 RNDKIPSNKSIIVPVFCSCS-GNIYQHNTP-YTASKNDTYYELVKETFQGLTTCQAMMGQ 150
Query: 139 NNISNPDLIQIGQNLTIPLPCSC-DDVDNAKVVH--YAHVVEEGSSFALIAQKFGTDRDT 195
N ++ + I IG LT+P+ C+C + A+ V H+V G + I + +G D +
Sbjct: 151 NYYASIN-IAIGAELTVPMLCACPTENQTARGVTSLLVHLVNYGDTIKSIGRAYGVDEQS 209
Query: 196 LMKLNGI------HDDSKLIAGEPLDVPL--KACNS 223
+++ N + + L+A P+ VPL K+C
Sbjct: 210 VLEANKLAVSQSKNSSMDLLALTPIIVPLIGKSCKE 245
>gi|328957413|ref|YP_004374799.1| putative polysaccharide deacetylase [Carnobacterium sp. 17-4]
gi|328673737|gb|AEB29783.1| putative polysaccharide deacetylase [Carnobacterium sp. 17-4]
Length = 394
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA+ + Q++V N +SNP++++IGQ L IP S + N
Sbjct: 288 YTVKAGDTLIKIAQ---AHKVTVQQLVAINQLSNPNILKIGQVLKIPAKASTPTIPNPVP 344
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+ V+ G + IA+K+G ++ N + + + + G+ L +P K
Sbjct: 345 TTTNYTVKSGDTLYSIAKKYGITVQQIVTANKLANANVIKVGQVLKIPTK 394
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+ VK D L IA ++G ++ Q++ AN ++N +LI++GQ LTIP
Sbjct: 241 HIVKPGDTLTKIA-ALYGVIV--QQLATANKLTNTNLIRVGQLLTIPTTN---------- 287
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI 225
+ V+ G + IAQ L+ +N + + + L G+ L +P KA +I
Sbjct: 288 ----YTVKAGDTLIKIAQAHKVTVQQLVAINQLSNPNILKIGQVLKIPAKASTPTI 339
>gi|374814086|ref|ZP_09717823.1| LysM domain/M23/M37 peptidase domain-containing protein [Treponema
primitia ZAS-1]
Length = 289
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 22/134 (16%)
Query: 84 PAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISN 143
PA+ P + IH + T +Y++ + G++F Q+I+ N I N
Sbjct: 24 PAKLPAEETIHIVQGGDT-------IYSLARTYGVNF------------QEILNLNGIDN 64
Query: 144 PDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIH 203
I++GQ + IP S +D+ +V H V G + IA+++G TL+ NG+
Sbjct: 65 AGRIRVGQRIRIPGTASVSSIDH-RVTD--HRVTRGETLYGIARQYGVSMQTLLSANGLS 121
Query: 204 DDSKLIAGEPLDVP 217
+ L G+ L +P
Sbjct: 122 ERYTLKIGDVLHIP 135
>gi|452975591|gb|EME75409.1| phage glycoside hydrolase [Bacillus sonorensis L12]
Length = 314
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 24/124 (19%)
Query: 103 VSDKVPV-----YTVKKDDGLDFIARTIFGQLLKYQKIVEA----NNISNPDLIQIGQNL 153
VS+K PV YTVKK D L IA+ KY V+A NNI +P+ I +GQ L
Sbjct: 206 VSNKKPVKTETVYTVKKGDTLSEIAQ-------KYNMTVKALQSLNNIKDPNKIYVGQKL 258
Query: 154 TIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
I S N K Y + ++ G + + I++KF T TL NGI + +K+ AG+
Sbjct: 259 KIGGSSS-----NKK--QY-YTIKSGDTLSGISKKFNTSIKTLQAWNGIKNANKIYAGQK 310
Query: 214 LDVP 217
+ V
Sbjct: 311 IRVK 314
>gi|317127627|ref|YP_004093909.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
gi|315472575|gb|ADU29178.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
Length = 376
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 104 SDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDD 163
+ + YTVK D L IAR I NN+S DLI+IGQ L IP +
Sbjct: 71 AQQARTYTVKSGDSLSVIARN---HNTTVNAIRSLNNLS-SDLIRIGQVLQIPSSSNVQQ 126
Query: 164 VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V N ++ V+ G S ++IA+ + T L LNG++ D + G+ L VP
Sbjct: 127 VSNNTQNVGSYTVKSGDSLSVIARNYNTTVAELRSLNGLNSD-LIRVGQVLQVP 179
>gi|297735222|emb|CBI17584.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 27 DFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVP 84
+F C+ + A CQ V Y P + I LF + L SI A+N R +
Sbjct: 31 NFSCTTDSPASCQTYVIYRAQAPGFLDVGNISDLFGISRL-SIAEASNLASEEAR---LS 86
Query: 85 AQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
+ + VPI C C+ ++ Y +K DD F++ T+F L Y + N P
Sbjct: 87 PDQLLLVPILCSCTGNHYFANIT--YKIKTDDSFYFVSVTVFENLTNYNAVEALNPGLEP 144
Query: 145 DLIQIGQNLTIPLPCSC 161
+Q+G + PL C C
Sbjct: 145 TTLQVGVEVVFPLFCKC 161
>gi|365870254|ref|ZP_09409798.1| putative mannose-specific lectin precursor [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|414580060|ref|ZP_11437201.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-1215]
gi|418420464|ref|ZP_12993643.1| putative mannose-specific lectin precursor [Mycobacterium abscessus
subsp. bolletii BD]
gi|420877428|ref|ZP_15340797.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0304]
gi|420882926|ref|ZP_15346289.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0421]
gi|420888289|ref|ZP_15351643.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0422]
gi|420894159|ref|ZP_15357501.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0708]
gi|420899043|ref|ZP_15362377.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0817]
gi|420904677|ref|ZP_15367996.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-1212]
gi|420971437|ref|ZP_15434632.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0921]
gi|421049315|ref|ZP_15512310.1| putative mannose-specific lectin [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|363997443|gb|EHM18655.1| putative mannose-specific lectin precursor [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|363999237|gb|EHM20442.1| putative mannose-specific lectin precursor [Mycobacterium abscessus
subsp. bolletii BD]
gi|392088919|gb|EIU14739.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0304]
gi|392089896|gb|EIU15712.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0421]
gi|392092849|gb|EIU18654.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0422]
gi|392101702|gb|EIU27490.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0817]
gi|392102749|gb|EIU28536.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0708]
gi|392107142|gb|EIU32925.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-1212]
gi|392119884|gb|EIU45651.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-1215]
gi|392168148|gb|EIU93827.1| putative mannose-specific lectin [Mycobacterium abscessus 5S-0921]
gi|392241228|gb|EIV66718.1| putative mannose-specific lectin [Mycobacterium massiliense CCUG
48898]
Length = 188
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA +G +YQKI +A+ I+NPDLIQ GQ LTIP
Sbjct: 141 YTVESGDTLWAIAERFYGDGNQYQKIADASGIANPDLIQPGQVLTIP 187
>gi|366165694|ref|ZP_09465449.1| M24/M37 family peptidase [Acetivibrio cellulolyticus CD2]
Length = 640
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 36/169 (21%)
Query: 68 LGANNFPPGTPRNF------SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI 121
LG + P P F S+P+ K +K + V+ +V Y VK D L I
Sbjct: 302 LGNTDSKPIDPMPFLKGKVTSIPSSKDVKPDVT--------VTSRVKEYKVKSGDTLGKI 353
Query: 122 ARTIFGQLLKYQ----KIVEANNISNPDLIQIGQNLTIPLPCSCDDV---------DNAK 168
A KY ++V N ISNP+LI +GQ + I P ++V D+ K
Sbjct: 354 A-------AKYSTTVAELVRINKISNPNLIYVGQVIKITDPGKLNNVKPKESNSGKDSGK 406
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V Y VV+ G + + IA K+G + L K N I + + + G+ + VP
Sbjct: 407 TVKY--VVKSGDTLSKIAAKYGVTVNELAKYNNIANPNLIYVGQVIKVP 453
>gi|169629459|ref|YP_001703108.1| putative mannose-specific lectin [Mycobacterium abscessus ATCC
19977]
gi|419707939|ref|ZP_14235411.1| putative mannose-specific lectin [Mycobacterium abscessus M93]
gi|419715585|ref|ZP_14242986.1| putative mannose-specific lectin [Mycobacterium abscessus M94]
gi|420861731|ref|ZP_15325127.1| putative mannose-specific lectin [Mycobacterium abscessus 4S-0303]
gi|420868576|ref|ZP_15331958.1| putative mannose-specific lectin [Mycobacterium abscessus
4S-0726-RA]
gi|420873020|ref|ZP_15336397.1| putative mannose-specific lectin [Mycobacterium abscessus
4S-0726-RB]
gi|420909966|ref|ZP_15373279.1| putative mannose-specific lectin [Mycobacterium abscessus
6G-0125-R]
gi|420916421|ref|ZP_15379725.1| putative mannose-specific lectin [Mycobacterium abscessus
6G-0125-S]
gi|420921587|ref|ZP_15384884.1| putative mannose-specific lectin [Mycobacterium abscessus
6G-0728-S]
gi|420927247|ref|ZP_15390529.1| putative mannose-specific lectin [Mycobacterium abscessus 6G-1108]
gi|420966747|ref|ZP_15429952.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0810-R]
gi|420977586|ref|ZP_15440765.1| putative mannose-specific lectin [Mycobacterium abscessus 6G-0212]
gi|420982967|ref|ZP_15446136.1| putative mannose-specific lectin [Mycobacterium abscessus
6G-0728-R]
gi|420988858|ref|ZP_15452014.1| putative mannose-specific lectin [Mycobacterium abscessus 4S-0206]
gi|421007403|ref|ZP_15470514.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0119-R]
gi|421012888|ref|ZP_15475973.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0122-R]
gi|421017794|ref|ZP_15480854.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0122-S]
gi|421023369|ref|ZP_15486416.1| putative mannose-specific lectin [Mycobacterium abscessus 3A-0731]
gi|421029059|ref|ZP_15492093.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0930-R]
gi|421033389|ref|ZP_15496411.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0930-S]
gi|421037635|ref|ZP_15500647.1| putative mannose-specific lectin [Mycobacterium abscessus
4S-0116-R]
gi|421043374|ref|ZP_15506375.1| putative mannose-specific lectin [Mycobacterium abscessus
4S-0116-S]
gi|169241426|emb|CAM62454.1| Putative mannose-specific lectin precursor [Mycobacterium
abscessus]
gi|382942484|gb|EIC66799.1| putative mannose-specific lectin [Mycobacterium abscessus M94]
gi|382944991|gb|EIC69294.1| putative mannose-specific lectin [Mycobacterium abscessus M93]
gi|392068046|gb|EIT93893.1| putative mannose-specific lectin [Mycobacterium abscessus
4S-0726-RA]
gi|392072048|gb|EIT97889.1| putative mannose-specific lectin [Mycobacterium abscessus
4S-0726-RB]
gi|392076892|gb|EIU02723.1| putative mannose-specific lectin [Mycobacterium abscessus 4S-0303]
gi|392120561|gb|EIU46327.1| putative mannose-specific lectin [Mycobacterium abscessus
6G-0125-S]
gi|392122340|gb|EIU48105.1| putative mannose-specific lectin [Mycobacterium abscessus
6G-0125-R]
gi|392131423|gb|EIU57169.1| putative mannose-specific lectin [Mycobacterium abscessus
6G-0728-S]
gi|392134480|gb|EIU60221.1| putative mannose-specific lectin [Mycobacterium abscessus 6G-1108]
gi|392166786|gb|EIU92469.1| putative mannose-specific lectin [Mycobacterium abscessus 6G-0212]
gi|392172447|gb|EIU98118.1| putative mannose-specific lectin [Mycobacterium abscessus
6G-0728-R]
gi|392183137|gb|EIV08788.1| putative mannose-specific lectin [Mycobacterium abscessus 4S-0206]
gi|392198856|gb|EIV24466.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0119-R]
gi|392204682|gb|EIV30269.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0122-R]
gi|392210580|gb|EIV36147.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0122-S]
gi|392214338|gb|EIV39890.1| putative mannose-specific lectin [Mycobacterium abscessus 3A-0731]
gi|392228564|gb|EIV54076.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0930-R]
gi|392229316|gb|EIV54827.1| putative mannose-specific lectin [Mycobacterium abscessus
4S-0116-R]
gi|392229930|gb|EIV55440.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0930-S]
gi|392237226|gb|EIV62720.1| putative mannose-specific lectin [Mycobacterium abscessus
4S-0116-S]
gi|392252188|gb|EIV77657.1| putative mannose-specific lectin [Mycobacterium abscessus
3A-0810-R]
Length = 188
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA +G +YQKI +A+ I+NPDLIQ GQ LTIP
Sbjct: 141 YTVESGDTLWAIAERFYGDGNQYQKIADASGIANPDLIQPGQVLTIP 187
>gi|242041683|ref|XP_002468236.1| hypothetical protein SORBIDRAFT_01g042230 [Sorghum bicolor]
gi|241922090|gb|EER95234.1| hypothetical protein SORBIDRAFT_01g042230 [Sorghum bicolor]
Length = 631
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 47 PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPI-HCICSNGTGVSD 105
P + I LF R I AN + + + +P+ VP+ C C+ G ++
Sbjct: 55 PGYQDLGSISDLFGTSQAR-IASANGL---SSEDGVLQPGQPLLVPVSKCGCTGGWSFAN 110
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDV 164
Y +++ D +AR + L YQ I N S P +Q+GQ +T+PL C C
Sbjct: 111 VT--YPIRQGDTFFNLARVSYENLTLYQLIQNLNPRSVPTSLQVGQEVTVPLFCRCPAPA 168
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDD--SKLIAGEPLDVPLK 219
+ + + Y V + G + + +++ T D + + N + S + G+P+ +P++
Sbjct: 169 ERSSFITY--VWQAGDTMSQVSKLMNTTEDEIAEANNVTSSSASASLVGQPMLIPVQ 223
>gi|225851379|ref|YP_002731613.1| lipoprotein [Persephonella marina EX-H1]
gi|225645776|gb|ACO03962.1| lipoprotein [Persephonella marina EX-H1]
Length = 403
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 14/115 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D LD IAR FG + Q I+ NN+ P I GQ L IP D +
Sbjct: 24 YTVRSGDSLDRIARK-FG--VSVQDIIRENNLKKPYRIYPGQKLKIP---QTDFI----- 72
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSS 224
H V+ G + + IA+K+ ++++ NG+ + G+ L +P K+ SS
Sbjct: 73 ---YHRVKYGENLSYIAKKYKVSVKSIIRANGLKKPYVIRTGQILKIPKKSVKSS 124
>gi|226498436|ref|NP_001140876.1| uncharacterized protein LOC100272952 [Zea mays]
gi|194701550|gb|ACF84859.1| unknown [Zea mays]
Length = 568
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
+P+ VP+ C C +G+ S Y + D I+ T L +YQ + N P
Sbjct: 18 QPLLVPLQCGCPSGSPNSYAPMQYQIASGDTYWIISTTKLQNLTQYQAVERVNPTLVPTN 77
Query: 147 IQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
+ +G +T P+ C C + +V++ G +++ IA F D +L+ LNG
Sbjct: 78 LDVGTMVTFPIFCQCPAAADNATALVTYVMQPGDTYSTIAAAFSVDAQSLVSLNG 132
>gi|148362068|gb|ABQ59614.1| LYK8 [Glycine max]
Length = 663
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEANN 140
++PA + VP++C CS + YT+K F IA + L Q + N
Sbjct: 97 TLPADTLVTVPVNCSCSGPYYQHNAS--YTIKVQGETYFSIANNTYQALTTCQALELQNT 154
Query: 141 ISNPDLIQIGQNLTIPLPCSCDDVDNAKV-VHY--AHVVEEGSSFALIAQKFGTDRDTLM 197
+ DL++ GQNL +PL C+C + Y ++V +G S + I FG D +++
Sbjct: 155 VGMRDLLK-GQNLHVPLRCACPTQKQREAGFKYLLTYLVSQGESVSAIGDIFGVDEQSIL 213
Query: 198 KLNGIHDDSKLIAGEPLDVPLK 219
N + S + P+ VPLK
Sbjct: 214 DANELSTSSVIFYFTPISVPLK 235
>gi|359476733|ref|XP_002269472.2| PREDICTED: probable receptor-like protein kinase At1g49730 [Vitis
vinifera]
Length = 608
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 27 DFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVP 84
+F C+ + A CQ V Y P + I LF + L SI A+N R +
Sbjct: 31 NFSCTTDSPASCQTYVIYRAQAPGFLDVGNISDLFGISRL-SIAEASNLASEEAR---LS 86
Query: 85 AQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
+ + VPI C C+ ++ Y +K DD F++ T+F L Y + N P
Sbjct: 87 PDQLLLVPILCSCTGNHYFANIT--YKIKTDDSFYFVSVTVFENLTNYNAVEALNPGLEP 144
Query: 145 DLIQIGQNLTIPLPCSC 161
+Q+G + PL C C
Sbjct: 145 TTLQVGVEVVFPLFCKC 161
>gi|147798981|emb|CAN60025.1| hypothetical protein VITISV_006908 [Vitis vinifera]
Length = 501
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 38 CQALVGYLPPNK-TTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCI 96
CQ V Y TI I LF + N +L NN P +P +P K + +PI+C
Sbjct: 50 CQTFVVYRASEYFQTILSISELFHM-NPDDLLHLNNLP--SPSEVLMPG-KGVLIPINCS 105
Query: 97 CSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLT 154
CS ++ Y V + IA +F LLK + EAN +++P ++ L
Sbjct: 106 CSGQXFEANFS--YXVPRTTXFSXIACGVFEGLLKPHTLGEANPSQVNDP---KVDSKLH 160
Query: 155 IPLPCSC-DDVDNAKVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAG 211
+PL C+C D+ ++ V Y + + EG + QKFG DT+ N + +
Sbjct: 161 VPLKCACPDNFTSSDGVKYLXTYPLREGDGTLKLGQKFGIPPDTIWVANHLVPRPTVYPN 220
Query: 212 EPLDVPLK 219
L VPL+
Sbjct: 221 XSLLVPLR 228
>gi|418248515|ref|ZP_12874901.1| putative mannose-specific lectin [Mycobacterium abscessus 47J26]
gi|420931426|ref|ZP_15394701.1| putative mannose-specific lectin [Mycobacterium massiliense
1S-151-0930]
gi|420939104|ref|ZP_15402373.1| putative mannose-specific lectin [Mycobacterium massiliense
1S-152-0914]
gi|420941683|ref|ZP_15404941.1| putative mannose-specific lectin [Mycobacterium massiliense
1S-153-0915]
gi|420947566|ref|ZP_15410816.1| putative mannose-specific lectin [Mycobacterium massiliense
1S-154-0310]
gi|420951937|ref|ZP_15415181.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0626]
gi|420956107|ref|ZP_15419344.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0107]
gi|420961300|ref|ZP_15424526.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-1231]
gi|420992075|ref|ZP_15455223.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0307]
gi|420997913|ref|ZP_15461051.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0912-R]
gi|421002351|ref|ZP_15465477.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0912-S]
gi|353453008|gb|EHC01402.1| putative mannose-specific lectin [Mycobacterium abscessus 47J26]
gi|392136185|gb|EIU61922.1| putative mannose-specific lectin [Mycobacterium massiliense
1S-151-0930]
gi|392144619|gb|EIU70344.1| putative mannose-specific lectin [Mycobacterium massiliense
1S-152-0914]
gi|392151165|gb|EIU76877.1| putative mannose-specific lectin [Mycobacterium massiliense
1S-153-0915]
gi|392154596|gb|EIU80302.1| putative mannose-specific lectin [Mycobacterium massiliense
1S-154-0310]
gi|392157249|gb|EIU82946.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0626]
gi|392186689|gb|EIV12335.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0307]
gi|392187625|gb|EIV13266.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0912-R]
gi|392197564|gb|EIV23179.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0912-S]
gi|392251334|gb|EIV76806.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-1231]
gi|392253006|gb|EIV78474.1| putative mannose-specific lectin [Mycobacterium massiliense
2B-0107]
Length = 188
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA +G +YQKI +A+ ++NPDLIQ GQ LTIP
Sbjct: 141 YTVESGDTLWAIAERFYGDGNQYQKIADASGVANPDLIQPGQVLTIP 187
>gi|445431469|ref|ZP_21438823.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC021]
gi|444759572|gb|ELW84038.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC021]
Length = 1074
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQNL +P S
Sbjct: 782 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQNLKVPAGVSV 838
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL------D 215
D HY VV+ G S IA K+ L LNG+ + + AG+ L +
Sbjct: 839 PD-------HY--VVQSGDSLHAIAAKYNLQTSYLADLNGLSRTAGVRAGQRLKLTGEVE 889
Query: 216 VPLKACNSSIKADSFDNY 233
P KA ++K ++ + Y
Sbjct: 890 TPSKATTKNVKEETPETY 907
>gi|320335212|ref|YP_004171923.1| peptidoglycan-binding lysin domain-containing protein [Deinococcus
maricopensis DSM 21211]
gi|319756501|gb|ADV68258.1| Peptidoglycan-binding lysin domain protein [Deinococcus
maricopensis DSM 21211]
Length = 250
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 30/48 (62%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VYTVK D L IA +G Y++I ANNIS+PD IQ GQ L IP
Sbjct: 200 VYTVKAGDTLSAIALRYYGDANAYRQIAHANNISDPDRIQAGQRLRIP 247
>gi|312143852|ref|YP_003995298.1| peptidase M23 [Halanaerobium hydrogeniformans]
gi|311904503|gb|ADQ14944.1| Peptidase M23 [Halanaerobium hydrogeniformans]
Length = 410
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
+ +K+P++ + N + + YTV++ D L IA LK ++I+ AN+IS+ +
Sbjct: 139 QTLKIPVNGVGGNEHNQNQESSTYTVRRGDTLSQIAAR---NNLKAEEIIAANDISS-EF 194
Query: 147 IQIGQNLTIPLPCSC-------DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKL 199
I+ GQ LT+P + DD + H V+ G + ++IAQ +GT + +
Sbjct: 195 IREGQELTLPNSSTNQQSSSNRDDSGESSDSTITHEVQPGEAISVIAQIYGTKASEIREN 254
Query: 200 NGIHDDSKLIAGEPL 214
N + D ++ AG+ L
Sbjct: 255 NDLEGD-RIYAGQEL 268
>gi|325283392|ref|YP_004255933.1| Peptidoglycan-binding lysin domain protein [Deinococcus
proteolyticus MRP]
gi|324315201|gb|ADY26316.1| Peptidoglycan-binding lysin domain protein [Deinococcus
proteolyticus MRP]
Length = 246
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VYTVK D L IA+ +G L Y KI + N I+NPD I++GQ + IP
Sbjct: 198 VYTVKAGDTLSKIAQRYYGDLNAYHKIAQYNGIANPDHIEVGQKIRIP 245
>gi|433542762|ref|ZP_20499185.1| hypothetical protein D478_03499 [Brevibacillus agri BAB-2500]
gi|432185953|gb|ELK43431.1| hypothetical protein D478_03499 [Brevibacillus agri BAB-2500]
Length = 300
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 15/92 (16%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY V++ D L IA +G LK K+VE N ISNP L+ +G L I + D+V
Sbjct: 48 VYAVRQGDTLSGIAER-YGLTLK--KLVEMNKISNPHLLSVGMKLII----TKDEV---- 96
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
H+V+ G + IA+++G R+ L++ N
Sbjct: 97 ----THMVKRGETLDYIARRYGVSRELLLERN 124
>gi|422848415|ref|ZP_16895091.1| endolysin [Streptococcus sanguinis SK115]
gi|325690457|gb|EGD32460.1| endolysin [Streptococcus sanguinis SK115]
Length = 316
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 36/168 (21%)
Query: 53 SEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTV 112
+ S + ++LRS+ VP +P +VP TG YTV
Sbjct: 180 GRVDSNYMYRDLRSVYTGQ-----------VPEPRP-EVPQQATAPASTGT------YTV 221
Query: 113 KKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI----PLPCSCDDVDNAK 168
++ D L IA ++G YQ++ N I+NPDLI GQ L + P S
Sbjct: 222 QEGDTLSAIA-ALYG--TSYQELAAINGIANPDLIYPGQVLQVTGSAQAPSST------- 271
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ VE G + + IA +GT+ L +NGI + + G+ L +
Sbjct: 272 ----TYTVENGDTLSAIADMYGTNYQHLAAINGIENPDLIYPGQVLRI 315
>gi|225435361|ref|XP_002282490.1| PREDICTED: receptor-like protein kinase ANXUR1-like [Vitis
vinifera]
Length = 605
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 15/188 (7%)
Query: 38 CQALVGYLPPNK-TTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCI 96
CQ V Y TI I LF + N +L NN P +P +P K + +PI+C
Sbjct: 46 CQTFVVYRASEYFQTILSISELFHM-NPDDLLHLNNLP--SPSEVLMPG-KGVLIPINCS 101
Query: 97 CSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLT 154
CS ++ YTV + IA +F LLK + EAN +++P ++ L
Sbjct: 102 CSGQFFEANFS--YTVPRTTTFSDIACGVFEGLLKPHTLGEANPSQVNDP---KVDSKLH 156
Query: 155 IPLPCSC-DDVDNAKVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAG 211
+PL C+C D+ ++ V Y + + EG + +KFG DT+ N + +
Sbjct: 157 VPLKCACPDNFTSSDGVKYLVTYPLREGDGTLKLGKKFGIPPDTIWVANHLVPRPTVYPN 216
Query: 212 EPLDVPLK 219
L VPL+
Sbjct: 217 TSLLVPLR 224
>gi|114567912|ref|YP_755066.1| peptidase M23B [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338847|gb|ABI69695.1| peptidase M23B [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 283
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
GVS ++ Y ++K D L IAR +G +K + ++ N + ++ +G+NL IP
Sbjct: 42 GVSQEI-TYRIQKGDTLWSIARH-YG--VKMETLMMINRLDENSILTVGKNLQIP----- 92
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
NA+V H+V+ G +F IA +G D L +LN +KL G+ L +P +A
Sbjct: 93 --GTNARV----HIVKSGETFWQIASSYGIGLDELQRLNSDKPANKLQVGDRLSLPARA 145
>gi|374313162|ref|YP_005059592.1| peptidoglycan-binding lysin domain-containing protein [Granulicella
mallensis MP5ACTX8]
gi|358755172|gb|AEU38562.1| Peptidoglycan-binding lysin domain protein [Granulicella mallensis
MP5ACTX8]
Length = 130
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
YT+K D L +++ +G KYQ+I AN I NPD IQ+GQ + IP+
Sbjct: 81 YTIKAGDNLSKVSKLFYGHANKYQEIASANGIDNPDHIQVGQEINIPV 128
>gi|383762045|ref|YP_005441027.1| hypothetical protein CLDAP_10900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382313|dbj|BAL99129.1| hypothetical protein CLDAP_10900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 338
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP----LPCSCDDV 164
++TV + L IAR +G + Q++ N I NP+L+ +GQ L IP P +
Sbjct: 27 IHTVASGENLSTIARR-YG--VSMQELAAYNGIVNPNLLFVGQKLQIPGRGSAPQTLTSA 83
Query: 165 DNAKVVHYA--HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
+ + HVV G + + +A+++G LM+LNG+ D + + G+ L V +
Sbjct: 84 GQEPLPGNSGYHVVLRGQTLSEVARRYGMTTGDLMRLNGLTDPNFIWVGQKLRVSARVAP 143
Query: 223 SSIKADS 229
+ A S
Sbjct: 144 VAGSAAS 150
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 135 IVEANNISNPDLIQIGQNLTI-----PLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKF 189
++ N +++P+ I +GQ L + P+ S V H+V+ G + A IAQ++
Sbjct: 117 LMRLNGLTDPNFIWVGQKLRVSARVAPVAGSAASTAKPAVADEIHIVQPGDTLAGIAQQY 176
Query: 190 GTDRDTLMKLNGIHDDSKLIAGEPLDV 216
T L+ NG+ + + + G+ L +
Sbjct: 177 KTTVQALLAANGLPNPNFIWVGQRLRI 203
>gi|306830689|ref|ZP_07463854.1| endolysin [Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|304427197|gb|EFM30304.1| endolysin [Streptococcus gallolyticus subsp. gallolyticus TX20005]
Length = 427
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA FG YQ + N ISNP+LI +GQ L + S V
Sbjct: 331 YTVQSGDTLSGIASK-FG--TSYQTLASLNGISNPNLIYVGQVLQVTGSESTGSV----- 382
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V G + + IA ++GT ++ LNG+ + + + AG+ L +
Sbjct: 383 ---YYTVRAGDNLSSIASRYGTSYQSIAALNGLANPNLIYAGQTLKI 426
>gi|357472137|ref|XP_003606353.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]
gi|355507408|gb|AES88550.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]
Length = 603
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 27/240 (11%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSA---------------QTAARCQALVGYLP-PNKTT 51
++ L F +C +++ + Q + S T C+ + Y N T
Sbjct: 14 MIHLWFIICICINSCYSQQPYDSSNCYSNETSPGSRYTCNSTHDTCKTFLVYRANQNFQT 73
Query: 52 ISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYT 111
IS+I +LF KN IL NN T + + K + +PI C CSN K+
Sbjct: 74 ISQISNLFN-KNTNEILHINNL---TSSSQILKQGKEVLIPIECTCSN-QFYQAKLSYKN 128
Query: 112 VKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA---K 168
++ IA +F LLK+ + + N + + + G + +PL CSC ++
Sbjct: 129 LESSTTFSNIACEVFEGLLKHVTLSDQNE-NQGNEPKFGDVIHVPLRCSCPKNYSSIMKG 187
Query: 169 VVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIK 226
V+ Y + + +G +F +++KFG D ++ N + S + + +P++ N IK
Sbjct: 188 VIKYFVTYPLIQGDNFDKLSKKFGISLDDFLEANQLQPLSSVFPQTVVLIPIRDANGPIK 247
>gi|383459930|ref|YP_005373919.1| class I chitinase [Corallococcus coralloides DSM 2259]
gi|380734347|gb|AFE10349.1| class I chitinase [Corallococcus coralloides DSM 2259]
Length = 370
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 106 KVPVYTVKKDDGLDFIAR---TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP------ 156
K YTV+ D L IA T G L K AN+I+NP+ I +GQ LTIP
Sbjct: 56 KAGSYTVRSGDTLSGIAGRHGTTVGALAK------ANHIANPNKIYVGQRLTIPGAGGGA 109
Query: 157 LPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
P + + ++ V G + + IA ++GT L + N I D +K+ G+ L +
Sbjct: 110 APVTSKPPPSGGA---SYTVRSGDTLSGIAGRYGTTVGALQQANHIADPNKIYVGQKLTI 166
Query: 217 P 217
P
Sbjct: 167 P 167
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y+V+ D L +A+ + QK N+I+N +LI++GQ LT+P D A
Sbjct: 4 YSVRSGDTLSGLAQRFNTSVASLQKT---NHIANANLIRVGQRLTVP-----DGFQAAPS 55
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ V G + + IA + GT L K N I + +K+ G+ L +P
Sbjct: 56 KAGSYTVRSGDTLSGIAGRHGTTVGALAKANHIANPNKIYVGQRLTIP 103
>gi|317506143|ref|ZP_07963966.1| D-mannose binding lectin [Segniliparus rugosus ATCC BAA-974]
gi|316255565|gb|EFV14812.1| D-mannose binding lectin [Segniliparus rugosus ATCC BAA-974]
Length = 183
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
Y V+ D L IA+ +G Y +I EAN I+NPDLI +GQ LTIP
Sbjct: 135 YVVESGDTLSAIAQKFYGDANLYPQIAEANGIANPDLINVGQELTIP 181
>gi|425741700|ref|ZP_18859840.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-487]
gi|425491524|gb|EKU57806.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-487]
Length = 1074
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQNL +P S
Sbjct: 782 GPSYKTESYKVQRGDTLSSIA---IKSKISLAELAELNNLKANSHVQLGQNLKVPAGVSV 838
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL------D 215
D HY VV+ G S IA K+ L LNG+ + + AG+ L +
Sbjct: 839 PD-------HY--VVQSGDSLHAIAAKYNVQTSYLADLNGLSRTAGVRAGQRLKLTGEVE 889
Query: 216 VPLKACNSSIKADSFDNY 233
P K ++K ++ + Y
Sbjct: 890 TPSKTSTKNVKEETPETY 907
>gi|168062898|ref|XP_001783413.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665056|gb|EDQ51753.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 554
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 6/146 (4%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
S+ A I +P C+C NG V YTV +D + + + +L + A+N
Sbjct: 19 SIQAGTNIYLPFDCLCLNGELVHRFS--YTVTTNDTAEKVVDVTYQKLTTVGAVRSASNS 76
Query: 142 SNPDLIQIGQNLTIPLPCSCDD--VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKL 199
+ I GQ+LTIP+ C C D VD + +VV+ ++ F D D + K
Sbjct: 77 GDLSSIYSGQSLTIPVRCYCGDPNVDPKYGLFSTYVVQADDQLTSLSTNFSVDADVISKF 136
Query: 200 NGIHDDSKLIAGEPLDVPLKACNSSI 225
N D L + +P KA N S
Sbjct: 137 NS--DTRNLSPDSIIFIPSKAANGSF 160
>gi|375266405|ref|YP_005023848.1| membrane-bound lytic murein transglycosylase D [Vibrio sp. EJY3]
gi|369841725|gb|AEX22869.1| membrane-bound lytic murein transglycosylase D [Vibrio sp. EJY3]
Length = 526
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 79/190 (41%), Gaps = 25/190 (13%)
Query: 61 VKNLRSILGANN---FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDG 117
VK L+S A N P P+ +P +K + G GV KV Y VK D
Sbjct: 294 VKELQSYNPAYNQWSTSPNGPQKLLIPIEKKDAFLAQVAENRGKGV--KVARYKVKSGDS 351
Query: 118 LDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA---------- 167
L +AR +G K I AN +SN D I+IGQ+L IP + DD A
Sbjct: 352 LGVLARK-YGTTTKV--IRRANGLSN-DNIRIGQHLLIPT-STKDDSKYALSASNRLSKT 406
Query: 168 -----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
+ HVV+ G S IA+ +L K NG+ L G+ + + KA +
Sbjct: 407 QSTARGQLKLTHVVQSGESLWSIARDNNVSYKSLAKWNGMGPKDTLRKGQKIVIWKKAAD 466
Query: 223 SSIKADSFDN 232
S+ F N
Sbjct: 467 DSVIRTVFYN 476
>gi|399054363|ref|ZP_10742894.1| metalloendopeptidase-like membrane protein [Brevibacillus sp.
CF112]
gi|398047866|gb|EJL40368.1| metalloendopeptidase-like membrane protein [Brevibacillus sp.
CF112]
Length = 300
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 15/92 (16%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY V++ D L IA +G LK K+VE N ISNP L+ +G L I + D+V
Sbjct: 48 VYAVRQGDTLSGIAER-YGLTLK--KLVEMNKISNPHLLSVGMKLII----TKDEV---- 96
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
H+V+ G + IA+++G R+ +++ N
Sbjct: 97 ----THMVKRGETLDYIARRYGVSRELMLERN 124
>gi|386712884|ref|YP_006179206.1| polysaccharide deacetylase family protein [Halobacillus halophilus
DSM 2266]
gi|384072439|emb|CCG43929.1| polysaccharide deacetylase family protein [Halobacillus halophilus
DSM 2266]
Length = 388
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA+ L ++EAN ISNP I+IGQNL IP D+ N
Sbjct: 296 YTVKAGDTLYSIAKRYNVSL---NDLIEANQISNPTYIRIGQNLVIP-----QDMKN--- 344
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V+ G + IA++ GT L ++N I + S + G L +P
Sbjct: 345 ----YTVKAGDTLYSIARRNGTTVQRLAEVNNISNTSLIYPGRTLVLP 388
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQ----KIVEANNISNPDLIQIGQNLTIPLPCSCDDV 164
++TVK D T++ KY+ +IV+ANN+ N ++IQIGQ L+IP D
Sbjct: 238 IHTVKAGD-------TLYSLAGKYEVTVNQIVKANNLVNANVIQIGQRLSIP----GDTP 286
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSS 224
+ ++ V+ G + IA+++ + L++ N I + + + G+ L +P N +
Sbjct: 287 NPPPAQGESYTVKAGDTLYSIAKRYNVSLNDLIEANQISNPTYIRIGQNLVIPQDMKNYT 346
Query: 225 IKADSFDNYLRVANGT 240
+KA + NGT
Sbjct: 347 VKAGDTLYSIARRNGT 362
>gi|337286292|ref|YP_004625765.1| lytic transglycosylase catalytic subunit [Thermodesulfatator
indicus DSM 15286]
gi|335359120|gb|AEH44801.1| Lytic transglycosylase catalytic [Thermodesulfatator indicus DSM
15286]
Length = 559
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 29/199 (14%)
Query: 46 PPNKTTISEIQSLFTVKNLRSILGAN-----NFPPGTPRNFSVPAQKPIKVP------IH 94
PP K ++ + +K++ +G + ++ P R PA +KVP +
Sbjct: 369 PPLKYETVKVNKQYRLKDIAKAIGVSAKLLADYNPEL-RYKITPANYVLKVPKGKGPQLV 427
Query: 95 CICSNGTGVSDKVP------VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQ 148
+ G+ + VP Y +++ + L +AR ++ I+ N ISNP ++
Sbjct: 428 ALLEKGS-IKPWVPRKTYYVYYRLRRGETLSHLARRYKTSVVA---IMRINGISNPRRLR 483
Query: 149 IGQNLTIPLP----CSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD 204
GQ L IP+ KV+ Y +V+ G S +IA+KF T ++M++N +
Sbjct: 484 AGQRLKIPVGKKYVAYSSKRKKQKVITY--IVKRGDSLWVIARKFKTSTKSIMRINNLK- 540
Query: 205 DSKLIAGEPLDVPLKACNS 223
+L G+ L +P++ +S
Sbjct: 541 THRLQVGQILKIPVRYSSS 559
>gi|224094680|ref|XP_002310198.1| predicted protein [Populus trichocarpa]
gi|222853101|gb|EEE90648.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 11 LLFTVCAALSTLSTAQ-----DFKCSAQTAARCQALVGYL--PPNKTTISEIQSLFTVKN 63
L F V ST TAQ +F C + C + YL PP+ + +I LF +
Sbjct: 14 LFFLVLVFFSTYVTAQAPPGTNFSCPVDSPTSCPTYISYLAQPPDFLDLGKISHLFGISR 73
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV-YTVKKDDGLDFIA 122
+N TP P Q + VPI C C TG V + Y +++ D + ++
Sbjct: 74 TLIASASNLVSEDTPL---FPNQL-LLVPIRCGC---TGSQSFVNITYQIQQGDSIYSVS 126
Query: 123 RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
F L ++Q++ N P L+ G + PL C C
Sbjct: 127 TISFENLTRWQEVEALNRSLTPTLLHAGDEVIFPLFCKC 165
>gi|390565864|ref|ZP_10246442.1| Peptidase M23 [Nitrolancetus hollandicus Lb]
gi|390170878|emb|CCF85781.1| Peptidase M23 [Nitrolancetus hollandicus Lb]
Length = 556
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 105 DKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV 164
+++ Y V+ D L IA FG L+ I+ AN I P LI GQ LTIP P +
Sbjct: 208 ERIVTYDVRPGDTLGAIAGR-FG--LEPNAILSANEIDEPTLIYAGQALTIPPPHTM--- 261
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG--IHDDSKLIAGEPLDVPLKACN 222
AK V+ G S +A ++G D +T+ G I D ++AG+ L +P++
Sbjct: 262 -VAK-------VQPGDSLNSLAARWGVDPETIATYPGNDITDPDTVVAGQSLVIPIEQAP 313
Query: 223 SSIKADSFD 231
+ K S D
Sbjct: 314 GTPKGASPD 322
>gi|336322736|ref|YP_004602703.1| lytic transglycosylase catalytic subunit [Flexistipes sinusarabici
DSM 4947]
gi|336106317|gb|AEI14135.1| Lytic transglycosylase catalytic [Flexistipes sinusarabici DSM
4947]
Length = 537
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY VKK D L IA FG L ++ N NP LI G + + D V AK
Sbjct: 432 VYIVKKGDNLYDIAHR-FG--LSLNDLLAMNKGINPRLIHPGDTVVVSKRTEFDYVRVAK 488
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+VV G + IA++FGT + +M++NG+ +++KL+ G L VP
Sbjct: 489 NGSAKYVVRRGDTLWDIAKRFGTSVNRIMRVNGL-ENAKLMPGNVLVVP 536
>gi|296393095|ref|YP_003657979.1| curculin [Segniliparus rotundus DSM 44985]
gi|296180242|gb|ADG97148.1| Curculin domain protein (mannose-binding) lectin [Segniliparus
rotundus DSM 44985]
Length = 179
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
Y V D L IA+ +G Y KI EAN I+NPDLI +GQ LTIP
Sbjct: 131 YVVAGGDTLSAIAQKFYGDANLYPKIAEANGIANPDLINVGQELTIP 177
>gi|357507639|ref|XP_003624108.1| Wall-associated receptor kinase-like protein [Medicago truncatula]
gi|355499123|gb|AES80326.1| Wall-associated receptor kinase-like protein [Medicago truncatula]
Length = 776
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
RN +P K I VPI C CS G P YTV+K D + + L Q + +
Sbjct: 106 RNEKLPTNKTIIVPILCSCS-GNIYQHNTP-YTVQKGDTYFHLVNETYQSLTTCQAL-KG 162
Query: 139 NNISNPDLIQIGQNLTIPLPCSCDDVDN-AKVVH--YAHVVEEGSSFALIAQKFGTDRDT 195
N + I IG +T+P+ C+C AK + ++V G + I + +G D +
Sbjct: 163 QNYYASENIAIGAEVTVPVLCACPTTTQMAKGITSLLVYIVNYGETVKSIGEAYGVDEQS 222
Query: 196 LMKLNGIHDDSK----LIAGEPLDVPLKACNSSIKADSF 230
+++ N + L A P+ +PL+ + DSF
Sbjct: 223 ILEANELQPSENRSVILFALTPILLPLRGKSCKEDPDSF 261
>gi|253576758|ref|ZP_04854084.1| spore peptidoglycan hydrolase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843789|gb|EES71811.1| spore peptidoglycan hydrolase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 428
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
Y+ IVEAN + NP+ + +GQ L IP+ S + V G S IAQ+FG
Sbjct: 23 YEDIVEANELPNPEQLVVGQTLVIPIVGSY------------YWVRPGDSLWSIAQRFGL 70
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGT 240
L ++N I + L G L +P + S+ F+ Y+ GT
Sbjct: 71 SYQELARVNAISVERPLSIGFRLYIPPRPRRSA----EFNAYVEPRGGT 115
>gi|260550749|ref|ZP_05824957.1| soluble lytic murein transglycosylase [Acinetobacter sp. RUH2624]
gi|424056341|ref|ZP_17793862.1| hypothetical protein W9I_02711 [Acinetobacter nosocomialis Ab22222]
gi|260406255|gb|EEW99739.1| soluble lytic murein transglycosylase [Acinetobacter sp. RUH2624]
gi|407441381|gb|EKF47887.1| hypothetical protein W9I_02711 [Acinetobacter nosocomialis Ab22222]
Length = 1074
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQNL +P S
Sbjct: 782 GPSYKTESYKVQRGDTLSSIA---IKSKISLAELAELNNLKANSHVQLGQNLKVPAGVSV 838
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL------D 215
D HY VV+ G S IA K+ L LNG+ + + AG+ L +
Sbjct: 839 PD-------HY--VVQSGDSLHAIAAKYNLQTSYLADLNGLSRTAGVRAGQRLKLTGEVE 889
Query: 216 VPLKACNSSIKADSFDNY 233
P K ++K ++ + Y
Sbjct: 890 TPSKTSTKNVKEETPETY 907
>gi|33862463|ref|NP_894023.1| LysM domain-containing protein [Prochlorococcus marinus str. MIT
9313]
gi|33640576|emb|CAE20365.1| possible LysM domain [Prochlorococcus marinus str. MIT 9313]
Length = 481
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 51 TISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVY 110
T+SEI + + V +LR+++ N N + + +K+P + G S +
Sbjct: 31 TLSEIAARYQV-SLRALMRLNGL--ANADNLFI--GQTLKLPGSASGTGPAGASR----H 81
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVV 170
TV+ + L IA ++ Q ++ N +SN D + IGQ L +P S A
Sbjct: 82 TVRSGETLSTIA---VRYRVRQQDLITLNGLSNADNLYIGQTLKLPGGASGAIRAGAS-- 136
Query: 171 HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
H V G + ++IA ++ + L+ LNG+ + L G+ L +P A +++A +
Sbjct: 137 --RHTVRSGETLSIIAARYRVRQQDLVALNGLANADNLFIGQTLKLPGSASG-TVRASAT 193
Query: 231 DNYLRVANGTYTFTANSCVKCQ 252
+ +R T V+ Q
Sbjct: 194 RHTVRSGETLSTIAVRYRVRQQ 215
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+TV+ + L IA ++ Q +V N ++N D + IGQ T+ LP S A
Sbjct: 138 HTVRSGETLSIIAARYR---VRQQDLVALNGLANADNLFIGQ--TLKLPGSASGTVRASA 192
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
H V G + + IA ++ + L+ LNG+ + + + G+ L +P
Sbjct: 193 TR--HTVRSGETLSTIAVRYRVRQQDLITLNGLANANHVERGQTLKLP 238
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD---- 165
+TV+ + L IA ++ Q ++ N ++N + ++ GQ L +P
Sbjct: 195 HTVRSGETLSTIA---VRYRVRQQDLITLNGLANANHVERGQTLKLPQGAVVPKPKAAAK 251
Query: 166 ------NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
A +H V G + IA + TL+K+NGI++ +KL+ G L + +K
Sbjct: 252 PKPVAIQANPNATSHTVARGQTLNQIAGAYQIPVATLIKINGINNPNKLLVGSKLSLRVK 311
>gi|398817005|ref|ZP_10575640.1| metalloendopeptidase-like membrane protein [Brevibacillus sp. BC25]
gi|398031517|gb|EJL24903.1| metalloendopeptidase-like membrane protein [Brevibacillus sp. BC25]
Length = 300
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY V++ D L IA+ +G LK +VEAN+++NP L+ +G L I D+V
Sbjct: 48 VYAVRQGDTLSGIAQR-YGLSLK--NLVEANSLTNPHLLSVGMKLII----KRDEV---- 96
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD--DSKLIAGEPLDVPLKACNSSIK 226
H+V+ G + IA+++G R++L++ N + L G+ + +P+ N +
Sbjct: 97 ----GHMVKRGETLDYIARRYGVSRESLIERNPLLKWLSDNLYVGQVVYIPIAKGNPMLG 152
Query: 227 AD 228
D
Sbjct: 153 ND 154
>gi|15224061|ref|NP_179957.1| lysin motif receptor-like kinase [Arabidopsis thaliana]
gi|75318503|sp|O64825.1|LYK4_ARATH RecName: Full=LysM domain receptor-like kinase 4;
Short=LysM-containing receptor-like kinase 4; Flags:
Precursor
gi|3152607|gb|AAC17086.1| putative protein kinase [Arabidopsis thaliana]
gi|330252395|gb|AEC07489.1| lysin motif receptor-like kinase [Arabidopsis thaliana]
Length = 612
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 38 CQALVGYLP-PNKTTISEIQSLFTVK-NLRSILGANNFPPGTPRNFSVPAQKPIKVPIHC 95
CQA V + P+ +T++ I SLF+V +L S L N+ P T S P+ + + +P+ C
Sbjct: 55 CQAYVIFRSTPSFSTVTSISSLFSVDPSLVSSL--NDASPST----SFPSGQQVIIPLTC 108
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C+ S+ YT++ +D IA L Q + + NN+S+ L G + +
Sbjct: 109 SCTGDDSQSN--ITYTIQPNDSYFAIANDTLQGLSTCQALAKQNNVSSQSLFP-GMRIVV 165
Query: 156 PLPCSCD-----DVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI-HDDSKLI 209
P+ C+C + D K + VV E + A+I+ +FG + +K N + ++S++
Sbjct: 166 PIRCACPTAKQINEDGVKYLMSYTVVFE-DTIAIISDRFGVETSKTLKANEMSFENSEVF 224
Query: 210 AGEPLDVPL 218
+ +PL
Sbjct: 225 PFTTILIPL 233
>gi|87303071|ref|ZP_01085869.1| Peptidoglycan-binding LysM [Synechococcus sp. WH 5701]
gi|87282238|gb|EAQ74198.1| Peptidoglycan-binding LysM [Synechococcus sp. WH 5701]
Length = 390
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 108 PVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA 167
P + VK + L IA +G + +++++ N I +P+L++ G L +P
Sbjct: 28 PQHVVKSGETLSEIAER-YG--VSVKRLLQLNGIKDPNLVEAGTRLKLP---------EG 75
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+H V G + + IA+++G LM+LNG+ D + G+ L VP
Sbjct: 76 SPAQASHTVSAGETLSEIAERYGLSVQKLMELNGLKDADLVQVGQRLKVP 125
>gi|87162779|gb|ABD28574.1| Protein kinase; Peptidoglycan-binding LysM [Medicago truncatula]
Length = 684
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
RN +P K I VPI C CS G P YTV+K D + + L Q + +
Sbjct: 106 RNEKLPTNKTIIVPILCSCS-GNIYQHNTP-YTVQKGDTYFHLVNETYQSLTTCQAL-KG 162
Query: 139 NNISNPDLIQIGQNLTIPLPCSC-DDVDNAKVVH--YAHVVEEGSSFALIAQKFGTDRDT 195
N + I IG +T+P+ C+C AK + ++V G + I + +G D +
Sbjct: 163 QNYYASENIAIGAEVTVPVLCACPTTTQMAKGITSLLVYIVNYGETVKSIGEAYGVDEQS 222
Query: 196 LMKLNGIHDDSK----LIAGEPLDVPLKACNSSIKADSF 230
+++ N + L A P+ +PL+ + DSF
Sbjct: 223 ILEANELQPSENRSVILFALTPILLPLRGKSCKEDPDSF 261
>gi|339498978|ref|YP_004697013.1| peptidase M23 [Spirochaeta caldaria DSM 7334]
gi|338833327|gb|AEJ18505.1| Peptidase M23 [Spirochaeta caldaria DSM 7334]
Length = 311
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+K D + IA+ FG L ++ NNI N LIQIGQ L+IP N
Sbjct: 78 YVVEKGDTIGDIAKK-FG--LNQDTLLSVNNIKNSRLIQIGQKLSIP---------NQDG 125
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S A +++K+ D + + +NG+ DD+ ++ G L +P
Sbjct: 126 ILYT--VKSGDSLAAVSEKYSVDSEIVKTINGLADDT-ILTGNKLFLP 170
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 163 DVDNAKVVHYA-HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+++ V+ Y+ +VVE+G + IA+KFG ++DTL+ +N I + + G+ L +P
Sbjct: 66 ELNRTMVLSYSEYVVEKGDTIGDIAKKFGLNQDTLLSVNNIKNSRLIQIGQKLSIP 121
>gi|422858189|ref|ZP_16904839.1| glycoside hydrolase family 25 [Streptococcus sanguinis SK1057]
gi|327461160|gb|EGF07493.1| glycoside hydrolase family 25 [Streptococcus sanguinis SK1057]
Length = 316
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 36/168 (21%)
Query: 53 SEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTV 112
+ S + ++LRS+ P PR+ VP Q V S GT YTV
Sbjct: 180 GRVDSNYMYRDLRSVY-TGQVP--EPRS-EVPQQATAPV------STGT--------YTV 221
Query: 113 KKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI----PLPCSCDDVDNAK 168
++ D L IA ++G YQ++ N I+NPDLI GQ L + P S
Sbjct: 222 QEGDTLSAIA-ALYG--TSYQELAAINGIANPDLIYPGQVLQVTGNPQAPSST------- 271
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
A+ VE G + + IA +GT+ L +NGI + + G+ L +
Sbjct: 272 ----AYTVESGDTLSAIAAMYGTNYQHLAAINGIENPDLIYPGQVLRI 315
>gi|326334134|ref|ZP_08200361.1| peptidoglycan hydrolase [Nocardioidaceae bacterium Broad-1]
gi|325948110|gb|EGD40223.1| peptidoglycan hydrolase [Nocardioidaceae bacterium Broad-1]
Length = 270
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+TV+ + L IA +G +K + N I++P I+ G L + P AK
Sbjct: 56 HTVQPGETLSGIAEK-YG--VKVADLATWNKIADPAKIRAGAELVVSPP--------AKP 104
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V G +F+ IA+KFG D LM NG D +KL+AG + +P
Sbjct: 105 AEKTYTVAPGDTFSGIAKKFGVDVAELMAHNGYEDPTKLLAGSEIKIP 152
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D IA+ FG + +++ N +P + G + IP + + KV
Sbjct: 109 YTVAPGDTFSGIAKK-FG--VDVAELMAHNGYEDPTKLLAGSEIKIP--AAKPKLKKYKV 163
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
V G +F IA+KFG D LM NG D +KL+AG +++
Sbjct: 164 V-------AGDTFFSIAKKFGVTADELMAHNGYTDPTKLLAGSTIEI 203
>gi|405371970|ref|ZP_11027272.1| Membrane-bound lytic murein transglycosylase D precursor
[Chondromyces apiculatus DSM 436]
gi|397088607|gb|EJJ19581.1| Membrane-bound lytic murein transglycosylase D precursor
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 374
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
Y+V+ D L +A+ + + + N ISNP+LI GQ L +P
Sbjct: 3 TYSVRSGDTLGALAKRFNTSV---SSLAKTNGISNPNLIFTGQKLRVPDGFDAPRASGGG 59
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ V+ G + + IA + GT L K N I + +++ AG+ L +P
Sbjct: 60 RAASSYTVKSGDTLSGIAGRHGTTVSALAKANNISNPNRIYAGQKLTIP 108
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 5/131 (3%)
Query: 89 IKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQ 148
++VP +G YTVK D L IA + +ANNISNP+ I
Sbjct: 44 LRVPDGFDAPRASGGGRAASSYTVKSGDTLSGIAGR---HGTTVSALAKANNISNPNRIY 100
Query: 149 IGQNLTIPLPCSCDDVD--NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
GQ LTIP + ++ V+ G + + IA + GT L + N I + +
Sbjct: 101 AGQKLTIPGSGGAAPTKPSSGGGGGGSYTVKSGDTLSGIASRHGTTVSALARANNISNPN 160
Query: 207 KLIAGEPLDVP 217
+ G+ L +P
Sbjct: 161 LIHVGQRLTIP 171
>gi|312870414|ref|ZP_07730539.1| putative muramidase-2 [Lactobacillus oris PB013-T2-3]
gi|417885985|ref|ZP_12530134.1| putative muramidase-2 [Lactobacillus oris F0423]
gi|311094115|gb|EFQ52434.1| putative muramidase-2 [Lactobacillus oris PB013-T2-3]
gi|341594189|gb|EGS36992.1| putative muramidase-2 [Lactobacillus oris F0423]
Length = 613
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL-----TIPLPCSCDDV 164
YTV+ D L IA + FG + Y ++ + NNI+NP+ I +GQ L T+ +
Sbjct: 378 YTVQSGDTLSGIA-SQFG--MSYSQLAQINNITNPNRIYVGQVLQLRTATVNHQTTAPTN 434
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
N ++ V+ G + + IA +FG L ++N I + +++ G+ L V
Sbjct: 435 TNTSSAAASYTVQSGDTLSGIASQFGMSYSQLAQINNIANPNRIYVGQVLRV 486
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI--PLP 158
T S YTV+ D L IA + FG + Y ++ + NNI+NP+ I +GQ L +
Sbjct: 435 TNTSSAAASYTVQSGDTLSGIA-SQFG--MSYSQLAQINNIANPNRIYVGQVLRVGGTQA 491
Query: 159 CSCDDVDNAKVVHY----AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
S + V + + ++ V+ G + + IA + G + L + NGI + +++ G+ L
Sbjct: 492 SSVNTVSQPQRSNTSAAGSYTVQSGDTLSGIASRLGVSYEQLAQSNGIANPNRIYVGQVL 551
Query: 215 DVPLKAC 221
V +A
Sbjct: 552 RVNGQAT 558
>gi|229490029|ref|ZP_04383882.1| mannose-binding lectin [Rhodococcus erythropolis SK121]
gi|453066990|ref|ZP_21970280.1| mannose-binding protein [Rhodococcus qingshengii BKS 20-40]
gi|229323130|gb|EEN88898.1| mannose-binding lectin [Rhodococcus erythropolis SK121]
gi|452767377|gb|EME25617.1| mannose-binding protein [Rhodococcus qingshengii BKS 20-40]
Length = 185
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA +G +YQ+I +AN I NPDLI GQ LTIP
Sbjct: 138 YTVESGDTLWAIAERFYGDGNQYQRIADANGIPNPDLINAGQVLTIP 184
>gi|226186617|dbj|BAH34721.1| putative mannose-binding protein [Rhodococcus erythropolis PR4]
Length = 185
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA +G +YQ+I +AN I NPDLI GQ LTIP
Sbjct: 138 YTVESGDTLWAIAERFYGDGNQYQRIADANGIPNPDLINAGQVLTIP 184
>gi|115469022|ref|NP_001058110.1| Os06g0625200 [Oryza sativa Japonica Group]
gi|51091047|dbj|BAD35689.1| receptor protein kinase-like [Oryza sativa Japonica Group]
gi|51535717|dbj|BAD37734.1| receptor protein kinase-like [Oryza sativa Japonica Group]
gi|113596150|dbj|BAF20024.1| Os06g0625200 [Oryza sativa Japonica Group]
gi|125597909|gb|EAZ37689.1| hypothetical protein OsJ_22029 [Oryza sativa Japonica Group]
Length = 630
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 91 VPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIG 150
VP+ C C+ TG Y +++ D IA F L YQ I+ N S I
Sbjct: 103 VPVPCSCNRATGYYQHNTTYAIQELDTFFLIANNTFQGLTTYQSIIANNPASEAMSPVIN 162
Query: 151 QNLTIPLPCSCDDVDNAKVVH-YAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
L +PL C+C ++ + +VV+EG + IA++F + ++ N
Sbjct: 163 GPLAVPLRCACPSATTGRINNLLTYVVQEGDNVTSIARRFNSTHGDVLAAN 213
>gi|115467012|ref|NP_001057105.1| Os06g0208800 [Oryza sativa Japonica Group]
gi|113595145|dbj|BAF19019.1| Os06g0208800, partial [Oryza sativa Japonica Group]
Length = 163
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 241 YTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT--- 297
Y TA +CV+C C + L C P+ S +C SM C +S L +GN T
Sbjct: 1 YALTAGNCVQCSCG-PGDLKLYCTPA--------SLTASCSSMQCPNSN-LMLGNVTAQS 50
Query: 298 TSNNCNRTTCEYAGYNNLSILTTLNS--LSTCPSP 330
TS CN ++C YAG N +I T+L+S TCP P
Sbjct: 51 TSGGCNVSSCSYAGLVNGTIATSLSSGLQPTCPGP 85
>gi|302824269|ref|XP_002993779.1| hypothetical protein SELMODRAFT_31503 [Selaginella moellendorffii]
gi|300138375|gb|EFJ05145.1| hypothetical protein SELMODRAFT_31503 [Selaginella moellendorffii]
Length = 525
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 91 VPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIG 150
+P C C + P D L IA+ F L + I EA + + + I G
Sbjct: 1 IPFDCQCVRKV-LQHNFPYEIAPDDTTLFIIAQEKFQGLTRDDWIAEATPLKDKNTIFAG 59
Query: 151 QNLTIPLPCSCD--DVDNAKVVHYAHVVEEGSSFALIAQKFGT-DRDTLMKLNGIHDDSK 207
N+ +P+ CSC DVD + + +VV+ G + + I+ +F D+ L + N D +
Sbjct: 60 LNVKVPVNCSCGNPDVDRSYGLFATYVVQPGDTLSTISARFKVPDQQLLQRFNPHIDFQR 119
Query: 208 LIAGEPLDVPLKACN 222
LIA + VP K N
Sbjct: 120 LIAQSIVFVPAKDSN 134
>gi|258404225|ref|YP_003196967.1| Lytic transglycosylase catalytic [Desulfohalobium retbaense DSM
5692]
gi|257796452|gb|ACV67389.1| Lytic transglycosylase catalytic [Desulfohalobium retbaense DSM
5692]
Length = 620
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V++ D L +AR + + K ++ ANN+ N L ++GQ LTIP
Sbjct: 449 YVVQRGDSLWELARRMDTTVTKLRR---ANNLQNTTL-RVGQRLTIPGGSQKAKTRQIAQ 504
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI-KAD 228
+ V++G + ++++FG +TL++ NGI S L G+ L +P + + + KA
Sbjct: 505 RRSNYTVKKGDTLWELSRRFGLSLNTLVQANGIGRSSALQVGQKLYIPDRGRTTQVAKAR 564
Query: 229 SFDNYLR-----VANGTYTFTANSCVKCQCDATNNW 259
+ R V G +T DA +W
Sbjct: 565 EKAAHQRLVRYTVRQGDNLWTIARRFGVSADALQDW 600
>gi|400533519|ref|ZP_10797057.1| hypothetical protein MCOL_V203975 [Mycobacterium colombiense CECT
3035]
gi|400331821|gb|EJO89316.1| hypothetical protein MCOL_V203975 [Mycobacterium colombiense CECT
3035]
Length = 191
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 30/47 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV D L IA +G +YQ I +A+ ISNPDLIQ GQ LTIP
Sbjct: 145 YTVASGDTLWAIAERFYGDGNRYQAIADASGISNPDLIQPGQVLTIP 191
>gi|408355594|ref|YP_006844125.1| peptidase M23 family protein [Amphibacillus xylanus NBRC 15112]
gi|407726365|dbj|BAM46363.1| peptidase M23 family protein [Amphibacillus xylanus NBRC 15112]
Length = 252
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVKK D L IA+ +G + K+V+ NNI NP+LI GQ L +V + V
Sbjct: 157 YTVKKGDTLSAIAKK-YGTTV--AKLVKDNNIKNPNLIHPGQKL---------NVSGSAV 204
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
HY V+ G + ++IA+ G D + KLN
Sbjct: 205 KHY--TVKRGDNLSVIAKNHGISLDQIKKLN 233
>gi|410458398|ref|ZP_11312157.1| glycoside hydrolase family protein [Bacillus azotoformans LMG 9581]
gi|409931279|gb|EKN68263.1| glycoside hydrolase family protein [Bacillus azotoformans LMG 9581]
Length = 468
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+ D L IA FG + Q+IV+AN +++P + IGQ LTIP V
Sbjct: 53 YVVQPGDTLWSIAYR-FG--VSIQEIVKANQLTDPSRLYIGQVLTIP------------V 97
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
++ H V+ G + LIA ++G +++ N + + L G+ L +P + +++ ++
Sbjct: 98 IY--HSVQSGETLWLIANRYGVSVSAIVQANQLQNPEMLYIGQRLRIPETSMKKAMEVNA 155
Query: 230 F 230
+
Sbjct: 156 Y 156
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
+Y V++ D L I+ FG Q+IV AN + +P+ + +G+ L IP P
Sbjct: 3 IYVVQRGDTLSRISHK-FG--TTNQQIVFANGLEDPNRLVVGEALVIPAP---------- 49
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ +VV+ G + IA +FG ++K N + D S+L G+ L +P+
Sbjct: 50 --YQQYVVQPGDTLWSIAYRFGVSIQEIVKANQLTDPSRLYIGQVLTIPV 97
>gi|108761372|ref|YP_635494.1| class I chitinase [Myxococcus xanthus DK 1622]
gi|108465252|gb|ABF90437.1| chitinase, class I [Myxococcus xanthus DK 1622]
Length = 364
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
+Y+V++ D L +A+ + + ++N ISNPDLI GQ L IP D D +
Sbjct: 3 IYSVRRGDTLSALAQRFNTSV---SSLAKSNGISNPDLIYAGQQLRIP-----DGFDAPR 54
Query: 169 VVHYA-HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V+ G + + IA + GT L K N I + ++ AG+ L +
Sbjct: 55 ASGGGSYTVKSGDTLSGIAGRHGTSVGALAKANNISNPDRIYAGQRLTI 103
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 110 YTVKKDDGLDFIAR---TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
YTVK D L IA T G L K ANNISNPD I GQ LTI
Sbjct: 61 YTVKSGDTLSGIAGRHGTSVGALAK------ANNISNPDRIYAGQRLTI----PGAGGAA 110
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIK 226
++ V+ G + + IA ++GT L + N I + + + AG+ L +P S +
Sbjct: 111 PSSGGGSYTVKPGDTLSGIAGRYGTSVGALAQANNISNPNLIYAGQRLTIPGGGGASPTR 170
>gi|359413415|ref|ZP_09205880.1| Peptidoglycan-binding lysin domain containing protein [Clostridium
sp. DL-VIII]
gi|357172299|gb|EHJ00474.1| Peptidoglycan-binding lysin domain containing protein [Clostridium
sp. DL-VIII]
Length = 256
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 78 PRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVE 137
P N + P + + + GT YTV+ D L IA FG + ++ E
Sbjct: 128 PVNRNQPQRGVWAEQWYSTLAGGTTPPPSGTTYTVQAGDTLSGIAAK-FG--VTVAQLQE 184
Query: 138 ANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLM 197
N ISNP+LI +GQ L + S + V+ G + + IA KFGT L
Sbjct: 185 WNGISNPNLIYVGQVLKVSAGSSGGTT--------TYTVQSGDTLSGIAAKFGTTVAQLQ 236
Query: 198 KLNGIHDDSKLIAGEPLDV 216
NGI + + + G+ L V
Sbjct: 237 AWNGISNPNLIYVGQVLRV 255
>gi|413956471|gb|AFW89120.1| putative lysM-domain receptor-like protein kinase family protein
[Zea mays]
Length = 638
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Query: 47 PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDK 106
P + I LF R I AN + + + +P+ VP+ C C+ ++
Sbjct: 57 PGYLDLGSISDLFGTSQAR-IASANGL---SSEDGVLQPGQPLLVPVRCGCTGAWSFANA 112
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
Y +++ D +AR + L +Y I + N S P +QIGQ +T+PL C C
Sbjct: 113 T--YPIRQGDTFYNLARLSYENLTEYHLIHDLNPRSEPTSLQIGQEVTVPLLCRCPP--- 167
Query: 167 AKVVH--YAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
A+ V +V + G + + +++ D + + N +
Sbjct: 168 ARAVQSFITYVWQPGDTLSQVSKLMNATADEIAEANNV 205
>gi|357966797|gb|AET97541.1| Nod factor perception protein [Parasponia andersonii]
Length = 614
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 15/220 (6%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAA-RCQALVGYL--PPNKTTISEIQSLFTVK 62
L L+L T +A S + A +F CS ++ C+ V Y PP + I +LF V
Sbjct: 5 LYLLLFFITHISAQSPPTLATNFSCSTNSSQPSCKTYVAYFAQPPLFMDLKSISNLFGVS 64
Query: 63 NLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIA 122
SI A+N + + + + + +P+ C C NG+ V Y + D ++
Sbjct: 65 P-SSISEASNLVSESTK---LTRGQLLLIPLSCSC-NGSHYFSNV-TYNITMGDSYYLVS 118
Query: 123 RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK-VVHY--AHVVEEG 179
F L + + + N NP+L+QIG + PL C C ++K + Y +V +
Sbjct: 119 IHSFENLTNWPLVRDTNPTLNPNLLQIGTKVIFPLYCGCPSKSHSKNGIKYLITYVWQPS 178
Query: 180 SSFALIAQKF-GTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ F ++ D +++ N + D K G P+ +P+
Sbjct: 179 DDIYRVSAMFNASEVDIIIENN--YQDFKAAVGYPVLIPV 216
>gi|395225451|ref|ZP_10403974.1| putative glycosyl hydrolase [Thiovulum sp. ES]
gi|394446386|gb|EJF07215.1| putative glycosyl hydrolase [Thiovulum sp. ES]
Length = 410
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 21/136 (15%)
Query: 90 KVPI-----HCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
K+P+ H + NG VY VK D L I FG + Y++I + N + N
Sbjct: 286 KLPVFRKMYHEVTENGL-------VYVVKSGDSLYEIGHR-FG--IPYREIQKRNALLNS 335
Query: 145 DLIQIGQNLTIPLPCSCDDVDNAKVVHYA----HVVEEGSSFALIAQKFGTDRDTLMKLN 200
+L IGQ L IP+ + + +KVV +A + V+ G + IA++F D ++LM+ N
Sbjct: 336 NLF-IGQKLIIPIVYNSESEKESKVVRFAKQSEYNVQRGDTLYSIAREFRIDVESLMEKN 394
Query: 201 GIHDDSKLIAGEPLDV 216
+H + I GE L V
Sbjct: 395 NLHSPTIQI-GEKLIV 409
>gi|147679169|ref|YP_001213384.1| membrane protein [Pelotomaculum thermopropionicum SI]
gi|146275266|dbj|BAF61015.1| membrane protein [Pelotomaculum thermopropionicum SI]
Length = 294
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+ D L IAR L + + AN + + D I+ GQ L +P C+
Sbjct: 60 YEVRPGDTLWSIARE---NGLTVEALAAANGLLDRDRIKAGQLLALPAGCAT-------- 108
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI 225
H V G + IA+ + D T+ NG+ D + ++AG+ L VPL A +++
Sbjct: 109 ----HRVRPGETLWDIARMYRVDVGTIAARNGLADSNSILAGQQLFVPLDASGAAM 160
>gi|297624226|ref|YP_003705660.1| peptidase M23 [Truepera radiovictrix DSM 17093]
gi|297165406|gb|ADI15117.1| Peptidase M23 [Truepera radiovictrix DSM 17093]
Length = 374
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IART+ L ++++ NN+++ I IGQ L + P + + A +
Sbjct: 73 YTVRSGDTLSGIARTVG---LPVEELMALNNLTD-TRITIGQTLVVQRPSAASEAAAAPL 128
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKAD 228
V G S +IA + G + L + NG+ +++L G+ L VP+ S+ AD
Sbjct: 129 TVE---VARGESLWVIANRHGVSVEALARANGLSPEARLRVGDRLTVPVAYAGSAGTAD 184
>gi|148909410|gb|ABR17803.1| unknown [Picea sitchensis]
Length = 536
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI----QIGQNLTIPLPCSC---D 162
YT+ D I+ F L Y + ++NP L+ QIG TIP+ C C
Sbjct: 11 YTIYGGDTFYLISTRKFENLTTYPAV----EVTNPTLVVTNLQIGSLATIPIRCKCPSNA 66
Query: 163 DVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
V N + +VV G + I+QKFG D L LNGI +S LI L VP+
Sbjct: 67 QVTNGTKMLITYVVHPGDTLLNISQKFGADLQNLKSLNGI--NSTLIPYSTLLVPV 120
>gi|222636776|gb|EEE66908.1| hypothetical protein OsJ_23753 [Oryza sativa Japonica Group]
Length = 135
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 93 IHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQN 152
I I ++G G + + P Y + + LD IAR + L+ YQ A+NISNP+ I + Q
Sbjct: 13 IKYIVTSGPGATFQRPTYCICAGNTLDTIARGVSAGLVPYQGHRCASNISNPNKIAVAQE 72
Query: 153 LTIPLP 158
L IP+P
Sbjct: 73 LWIPVP 78
>gi|289579097|ref|YP_003477724.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
gi|289528810|gb|ADD03162.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
Ab9]
Length = 336
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL-------TIPLPCSCD 162
YTV+ D L IA+ + Y+ I+ NN++ P I GQ L +P P
Sbjct: 57 YTVQPGDTLYLIAQKFN---VPYEAIIYTNNLTYPYTIYPGQKLFIPGVKIVVPQPSLFP 113
Query: 163 DVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
K + V+ G + +IAQKFG D L+K N + + + + AG+ L +P C+
Sbjct: 114 QPPLQKPCPTYYTVQPGDTLWIIAQKFGVSLDELIKANYLLNPNMIYAGQTLIIP---CS 170
Query: 223 SS 224
+S
Sbjct: 171 TS 172
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+ D L IA+ + I+ NNI NP LI GQ L IP+ S
Sbjct: 8 YVVQPGDTLFSIAKKFNTSV---DAIITRNNIINPSLIYPGQRLIIPVQGSY-------- 56
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V+ G + LIAQKF + ++ N + + G+ L +P
Sbjct: 57 ----YTVQPGDTLYLIAQKFNVPYEAIIYTNNLTYPYTIYPGQKLFIP 100
>gi|414865624|tpg|DAA44181.1| TPA: putative lysM-domain receptor-like protein kinase family
protein [Zea mays]
Length = 636
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 47 PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDK 106
P + I LF R I AN + + + +P+ VP+ C C+ ++
Sbjct: 59 PGYLDLGSISDLFGTSQAR-IASANGL---SSEDGVLQPGQPLLVPVRCGCAGAWSFAN- 113
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVD 165
Y +++ D +A+ + L +Y I N S P +QIGQ +T+PL C C +
Sbjct: 114 -VTYPIRQGDTFYNLAKASYENLTEYHLIQNLNPGSEPTSLQIGQEVTVPLLCRCPARAE 172
Query: 166 NAKVVH--YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA---GEPLDVPLK 219
++ V ++ + G + + +++ D + + N + ++ A G+P+ +P++
Sbjct: 173 RSRGVQSLITYMWQAGDTMSQVSKLMNATVDEIAEANNVTANTSASASFVGQPMLIPVR 231
>gi|333369314|ref|ZP_08461439.1| lytic transglycosylase [Psychrobacter sp. 1501(2011)]
gi|332973002|gb|EGK10941.1| lytic transglycosylase [Psychrobacter sp. 1501(2011)]
Length = 1070
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQL-LKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTVK D L +A GQ + ++ AN +SN +QIGQ +TIP A
Sbjct: 976 YTVKSGDSLIALA----GQYGVSVSQLASANGLSNNAQLQIGQKITIP----------AT 1021
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+Y V+ G S +A+K+G L +LNGI + L G+ + VP++
Sbjct: 1022 TTNYK--VQSGDSLIGLAKKYGISPQKLAELNGISSTAMLQLGQTIKVPVQ 1070
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD---N 166
YTVK D L IA + + + +I + NN S +Q GQ I LP + + V N
Sbjct: 756 YTVKSGDTLIGIANKLG---VAHTQIADINNFSATTQLQRGQT--IKLPVAKEQVARNLN 810
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ + Y V+ G S +A K+ L K N + S L+ G+ + +P
Sbjct: 811 NQTIKYK--VQSGDSLTALANKYDLSISDLAKANNLSVTSNLLVGQVITIP 859
>gi|383825382|ref|ZP_09980532.1| mannose-binding lectin [Mycobacterium xenopi RIVM700367]
gi|383335112|gb|EID13544.1| mannose-binding lectin [Mycobacterium xenopi RIVM700367]
Length = 200
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 30/47 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA +G KYQ I +A+ ISNPDLI GQ LTIP
Sbjct: 154 YTVESGDTLWAIAERFYGDGSKYQVIADASGISNPDLIHPGQVLTIP 200
>gi|422846921|ref|ZP_16893604.1| glycoside hydrolase family 25 [Streptococcus sanguinis SK72]
gi|325687729|gb|EGD29750.1| glycoside hydrolase family 25 [Streptococcus sanguinis SK72]
Length = 316
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 36/168 (21%)
Query: 53 SEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTV 112
+ S + ++LRS+ VP + ++VP TG YTV
Sbjct: 180 GRVDSNYMYRDLRSVYTGQ-----------VPEPR-LEVPQQATAPVSTGT------YTV 221
Query: 113 KKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI----PLPCSCDDVDNAK 168
++ D L IA ++G YQ++ N I+NPDLI GQ L + P S
Sbjct: 222 QEGDTLSAIA-ALYG--TSYQELAAVNGIANPDLIYPGQVLQVTGNPQAPSST------- 271
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ VE G + + IA +GT+ L +NGI + + G+ L +
Sbjct: 272 ----TYTVESGDTLSAIAAMYGTNYQHLAAINGIENPDLVYPGQVLRI 315
>gi|255577064|ref|XP_002529416.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223531093|gb|EEF32942.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 607
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 51 TISEIQSLFTVKNLRSILGANN--FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVP 108
TIS + LF ++ +L NN FP + + + VP+ C C G +V
Sbjct: 60 TISNVSRLFQ-RDSEELLRLNNLSFPSEI-----LEQGREVLVPVTCSC---IGTFFQVS 110
Query: 109 V-YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDN 166
+ Y V L IA ++F L+K ++E N N D I++ L IPL C+C D +
Sbjct: 111 ISYKVPDKTTLSEIACSLFEGLVKLHTLIEENPSENND-IKVDSELDIPLRCACPDKLST 169
Query: 167 AKVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
V Y + + EG + +++QKFG L N + + + VPLK
Sbjct: 170 RSEVQYLVTYPLLEGDALNVLSQKFGISTIDLWAANHLEPLPTVYPNTTILVPLK 224
>gi|154684535|ref|YP_001419696.1| hypothetical protein RBAM_000210 [Bacillus amyloliquefaciens FZB42]
gi|154350386|gb|ABS72465.1| YaaH [Bacillus amyloliquefaciens FZB42]
Length = 426
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I EAN + NP+ + +GQ L IP+ + V++G + A IA +F
Sbjct: 21 IAEANKLPNPNTLVVGQTLVIPIEGQY------------YEVKQGDTLAAIAGRFHISAA 68
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
L ++NGI + L AG L +P +A I+++++
Sbjct: 69 ELARVNGIQPGTTLRAGTRLYIPQQANKPDIESNAY 104
>gi|394992660|ref|ZP_10385434.1| YaaH [Bacillus sp. 916]
gi|452854079|ref|YP_007495762.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|393806491|gb|EJD67836.1| YaaH [Bacillus sp. 916]
gi|452078339|emb|CCP20089.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 426
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I EAN + NP+ + +GQ L IP+ + V++G + A IA +F
Sbjct: 21 IAEANKLPNPNTLVVGQTLVIPIEGQY------------YEVKQGDTLAAIAGRFHISAA 68
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
L ++NGI + L AG L +P +A I+++++
Sbjct: 69 ELARVNGIQPGTTLRAGTRLYIPQQANKPDIESNAY 104
>gi|422465792|ref|ZP_16542373.1| LysM domain protein, partial [Propionibacterium acnes HL110PA4]
gi|315092207|gb|EFT64183.1| LysM domain protein [Propionibacterium acnes HL110PA4]
Length = 283
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ +D L IA +G ++++I EA+ I +++GQ L +P+P +N
Sbjct: 164 YTVRANDYLWKIAEHYYGDGAQFRRIAEASGIDPHSELKVGQKLVLPVP------ENTAA 217
Query: 170 VHYAHVVEEGSSFALIAQKF---GTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V H V+ G IA+ + G + + +GI S L G+ L +P
Sbjct: 218 V---HSVKAGEYLWEIAEHYYGDGAQYHKIAEASGIDAHSDLAVGQKLVIP 265
>gi|163791146|ref|ZP_02185565.1| polysaccharide deacetylase family protein [Carnobacterium sp. AT7]
gi|159873618|gb|EDP67703.1| polysaccharide deacetylase family protein [Carnobacterium sp. AT7]
Length = 386
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA+ + Q++V+ N ++NP+L++IGQ L IP + ++
Sbjct: 288 YTVKAGDILIKIAK---AHNVTVQQLVDTNKLTNPNLLKIGQILKIPAKLAATTMN---- 340
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+ V+ G + IA K+G +++ N + + + G+ L +P K
Sbjct: 341 ----YKVKSGDTLYSIANKYGVKVQSIVTANKLASANVITVGQVLKIPTK 386
>gi|228990237|ref|ZP_04150205.1| Cell wall hydrolase [Bacillus pseudomycoides DSM 12442]
gi|228769476|gb|EEM18071.1| Cell wall hydrolase [Bacillus pseudomycoides DSM 12442]
Length = 265
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
PI + SN G +D VYTVKK+D L I+ +G + Q I +AN+ +N D I
Sbjct: 11 PISAATITLVSN-QGTADAATVYTVKKNDTLGGIS-IHYG--VSVQAIKQANHKTN-DRI 65
Query: 148 QIGQNLTIPL-PCSCDDVDNAKVV---HYAHV---VEEGSSFALIAQKFGTDRDTLMKLN 200
IG+ LTIP+ P S + V H A + V+ G + IA+++ ++ + N
Sbjct: 66 YIGEQLTIPVSPSSSESTQQKDVAASNHSAQIVYQVQRGDTLEAIAKRYNVSIQSIRQAN 125
Query: 201 GIHDDSKLIAGEPL 214
+ D ++ AG+ L
Sbjct: 126 NTNGD-RIYAGQHL 138
>gi|188997353|ref|YP_001931604.1| Peptidase M23 [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932420|gb|ACD67050.1| Peptidase M23 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 509
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS--------- 160
YTV+K D L+ IAR + ++I + NNI + I+ G L IP +
Sbjct: 25 YTVQKGDTLEKIARKFN---VSVEEIKKVNNIKDERKIRDGMKLEIPTKETNSKKETKKE 81
Query: 161 ---CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ + +VV++G + IA+K+G LM NG+ D+ K+ AG+ L +P
Sbjct: 82 IKKTSKKESERNKELTYVVQKGDTLETIAKKYGFTVKELMDYNGMKDE-KIFAGDELKIP 140
Query: 218 LKACN 222
K
Sbjct: 141 PKGAK 145
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNS 223
+ V++G + IA+KF + + K+N I D+ K+ G L++P K NS
Sbjct: 25 YTVQKGDTLEKIARKFNVSVEEIKKVNNIKDERKIRDGMKLEIPTKETNS 74
>gi|303249292|ref|ZP_07335524.1| Lytic transglycosylase catalytic [Desulfovibrio fructosovorans JJ]
gi|302489298|gb|EFL49255.1| Lytic transglycosylase catalytic [Desulfovibrio fructosovorans JJ]
Length = 673
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+ V K + + IAR +G + ++++ AN + + +G L IP S + A
Sbjct: 412 HRVNKGESIGSIARK-YG--VSTKELMAANRMKRAGRLTLGAWLVIPQSASSRSIQTASA 468
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+H V+ G + + IA K+ D D LM N + L+AG+ L +P
Sbjct: 469 ---SHTVQRGETISGIADKYNVDPDALMAANHLRSARDLLAGQKLSIP 513
>gi|256848450|ref|ZP_05553892.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Lactobacillus coleohominis 101-4-CHN]
gi|256714717|gb|EEU29696.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Lactobacillus coleohominis 101-4-CHN]
Length = 618
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP-----LPCSCDDV 164
YTV+ D L IA Q I + N+I+NP+ I +GQ L I +
Sbjct: 320 YTVQSGDTLSGIANQF---ATTVQNIAQLNDIANPNRIYVGQRLLIKQPSSSTTTNTPSS 376
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
+ V ++ V+ G + + IA KFGT+ TL +LN + + +++ G+ L
Sbjct: 377 NTGNTVASSYTVQSGENLSEIAAKFGTNWQTLAQLNNLSNPNRIYVGQVL 426
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 112 VKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH 171
VK D L IA FG Y+ + + NNI+NP+ I +GQ + I + + +
Sbjct: 517 VKSGDTLSGIAAK-FG--TSYEALAQRNNIANPNTIYVGQVIQISGSVNNNRSYQSTNSQ 573
Query: 172 YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V+ G + + IA GT +L NGI + G+ + +
Sbjct: 574 GTYTVKSGDTLSGIAAAHGTSWTSLANKNGIRAPYTIYVGQRISL 618
>gi|299481072|gb|ADJ19111.1| Nod-factor receptor 5B [Glycine max]
Length = 599
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARC-QALVGYLP--PNKTTISEIQSLFTVKNL 64
+++L FT A S + +F C + + + V Y+ PN +++ I ++F L
Sbjct: 18 VLMLFFTNIVAQSQQTNETNFSCPSDSPPPSCETYVTYIAQSPNFLSLTSISNIFDTSPL 77
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + A + + +P+ C C+ ++ Y + D F+A T
Sbjct: 78 -SIARASNLEPEDDK---LIADQVLLIPVTCGCTGNRSFANIS--YEINPGDSFYFVATT 131
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N +P+ + IG + PL C C + +D +V + +
Sbjct: 132 SYENLTNWRVVMDLNPSLSPNTLPIGIQVVFPLFCKCPSKNQLDKGIKYLITYVWQPSDN 191
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L+++KFG + ++ N + P+ +P+
Sbjct: 192 VSLVSEKFGASPEDILSENNYGQNFTAANNLPVLIPV 228
>gi|221316553|ref|ZP_03598358.1| Lyzozyme M1 (1,4-beta-N-acetylmuramidase) [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
Length = 353
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQ----KIVEANNISNPDLIQIGQNLTIPLPCSC 161
K Y VK D L IA LKY+ K+V N + NP+ + +GQ L +P S
Sbjct: 248 KTSTYKVKSGDTLSEIA-------LKYKTSVLKLVSLNKLKNPNKLYVGQKLKVPAKTSV 300
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+K + V++G S + IA K+ T + LN + + +++ G+ L V
Sbjct: 301 TKKAASKTY---YTVKKGDSVSKIAVKYKTTVSKIKSLNKLKNPNRIYVGQKLRV 352
>gi|299481074|gb|ADJ19112.1| Nod-factor receptor 5B [Glycine max]
Length = 599
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARC-QALVGYLP--PNKTTISEIQSLFTVKNL 64
+++L FT A S + +F C + + + V Y+ PN +++ I ++F L
Sbjct: 18 VLMLFFTNIVAQSQQTNETNFSCPSDSPPPSCETYVTYIAQSPNFLSLTSISNIFDTSPL 77
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
SI A+N P + + A + + +P+ C C+ ++ Y + D F+A T
Sbjct: 78 -SIARASNLEPEDDK---LIADQVLLIPVTCGCTGNRSFANIS--YEINPGDSFYFVATT 131
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSS 181
+ L ++ +++ N +P+ + IG + PL C C + +D +V + +
Sbjct: 132 SYENLTNWRVVMDLNPSLSPNTLPIGIQVVFPLFCKCPSKNQLDKGIKYLITYVWQPSDN 191
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+L+++KFG + ++ N + P+ +P+
Sbjct: 192 VSLVSEKFGASPEDILSENNYGQNFTAANNLPVLIPV 228
>gi|225848886|ref|YP_002729050.1| lipoprotein [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643593|gb|ACN98643.1| lipoprotein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 440
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY VKK D L+ IA+ + + I +ANNI + ++ G L IP+ S +
Sbjct: 24 VYEVKKGDTLEKIAKKYN---VSIEDIKKANNIKDEKKLREGMKLKIPVKTSKQEKKKKV 80
Query: 169 VVHY-AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
V + V++G + IA+K+G +M N + D+ K+ AG+ L +PLK
Sbjct: 81 EVVEETYTVKKGDTLETIAKKYGITVKEIMDYNNMKDE-KIFAGDELKIPLKG 132
>gi|356542639|ref|XP_003539774.1| PREDICTED: proline-rich receptor-like protein kinase PERK8-like
[Glycine max]
Length = 630
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 51 TISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVY 110
TISE+ LF N +L NN P + + + K + +P++C CS G + Y
Sbjct: 60 TISEVSKLFNT-NSDEVLLKNNLTPLSLFD-ELKQGKEVLIPVNCTCSGGYFQASLS--Y 115
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN---- 166
V + IA +F LLK+ + E NIS + + G L +PL C+C D N
Sbjct: 116 KVLNNTTYSEIACGVFEGLLKHLTLAE-ENISQGNKPEAGSELRVPLMCACPDSYNFTRS 174
Query: 167 ---AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+V Y ++ G +++KFG + +N ++ S + + VP+K
Sbjct: 175 MKVKYLVTYPLIL--GDDPDKLSEKFGISTEEFYAVNSLNPFSTVYPDTVVFVPIK 228
>gi|156744067|ref|YP_001434196.1| peptidoglycan-binding protein LysM [Roseiflexus castenholzii DSM
13941]
gi|156235395|gb|ABU60178.1| Peptidoglycan-binding LysM [Roseiflexus castenholzii DSM 13941]
Length = 250
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V++ D L IA+ +F + I N I+NP + IGQ L IP
Sbjct: 151 YVVQRGDTLYTIAK-LFN--VSVDDIQAYNTIANPSSLTIGQTLRIP---------TGDG 198
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+ +VV+ G IA++FG + ++ +N I + S L G+ L +P +
Sbjct: 199 TYVDYVVQRGDLLVTIARRFGVSVEDILAINDIRNPSSLTIGQTLRIPRR 248
>gi|424780566|ref|ZP_18207439.1| Aggregation promoting factor [Catellicoccus marimammalium M35/04/3]
gi|422842968|gb|EKU27415.1| Aggregation promoting factor [Catellicoccus marimammalium M35/04/3]
Length = 237
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VYTV+K D L I+R G Q IVE NNI+NP++I +G+ +TIP
Sbjct: 32 VYTVQKGDTLYKISRKFAGDASLVQAIVEKNNIANPNMIFVGEKVTIP 79
>gi|356531931|ref|XP_003534529.1| PREDICTED: wall-associated receptor kinase-like 2-like [Glycine
max]
Length = 666
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
RN +P+ K I VP+ C CS G P YT K+D + + F L Q ++
Sbjct: 93 RNDKIPSNKSIIVPVFCSCS-GNIYQHNTP-YTASKNDTYYELVKETFQGLTTCQAMM-G 149
Query: 139 NNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDT 195
N P I IG LT+P C+C + ++V G + I + +G D +
Sbjct: 150 RNYYAPVNIVIGAELTVPKLCACPTENQTARGITSLLVYLVNYGDTIKSIGRAYGVDEQS 209
Query: 196 LMKLNGIHD------DSKLIAGEPLDVPL--KACNS 223
+++ N + + L A P+ VPL K+C
Sbjct: 210 VLEANKLAEPQSSNRSMDLFALTPILVPLIGKSCKE 245
>gi|229003995|ref|ZP_04161800.1| Cell wall hydrolase [Bacillus mycoides Rock1-4]
gi|228757271|gb|EEM06511.1| Cell wall hydrolase [Bacillus mycoides Rock1-4]
Length = 265
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
PI + SN G +D VYTVKK+D L I+ +G + Q I +AN+ +N D I
Sbjct: 11 PISAATITLVSN-QGTADAATVYTVKKNDTLGDIS-IHYG--VSVQAIKQANHKTN-DRI 65
Query: 148 QIGQNLTIPL-PCSCDDVDNAKVV---HYAHV---VEEGSSFALIAQKFGTDRDTLMKLN 200
IG+ LTIP+ P S + V H A + V+ G + IA+++ ++ + N
Sbjct: 66 YIGEQLTIPVSPSSSESTQQKDVAASNHSAQIVYQVQRGDTLEAIAKRYNVSIQSIRQAN 125
Query: 201 GIHDDSKLIAGEPL 214
+ D ++ AG+ L
Sbjct: 126 NTNGD-RIYAGQHL 138
>gi|452990758|emb|CCQ97995.1| Spore germination protein yaaH [Clostridium ultunense Esp]
Length = 425
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
+ V + D L IAR FG + ++V+AN +++P+ + GQ L +P
Sbjct: 3 IVVVHQGDSLWTIARR-FG--VSVDEMVQANALTHPERLVPGQALLVPQKN--------- 50
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
H V+ G S LIA+++G D+L+++N I D ++++ G + +P K
Sbjct: 51 ----IHRVQPGESLWLIARRYGVSLDSLLQINRIEDPNRIMPGMSIIIPEK 97
>gi|290490584|dbj|BAI79279.1| LysM type receptor kinase [Lotus japonicus]
gi|290490606|dbj|BAI79290.1| LysM type receptor kinase [Lotus japonicus]
Length = 603
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 51 TISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNG---TGVSDKV 107
TIS+I +LF + + R +L NN + + K + +P+ C CS +S KV
Sbjct: 66 TISDISNLFNMSS-RQVLHINNLISSSE---ILKQGKEVLIPVDCTCSGEFYQASLSYKV 121
Query: 108 PVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDN 166
P T + I+ +F LLK Q + N+S + ++G L +PL C+C + +
Sbjct: 122 PEITTFSE-----ISCGVFEALLK-QLTMAEENLSQGESPEVGSELQVPLRCACPGNFSS 175
Query: 167 AKVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
K V Y + V G + QKFG + ++ N ++ S L + VP+
Sbjct: 176 GKKVKYLVTYPVILGDDLDQLTQKFGISPEGFLEQNHLNSLSTLYPQTVVLVPI 229
>gi|334143604|ref|YP_004536760.1| cell wall hydrolase/autolysin [Thioalkalimicrobium cyclicum ALM1]
gi|333964515|gb|AEG31281.1| cell wall hydrolase/autolysin [Thioalkalimicrobium cyclicum ALM1]
Length = 566
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+ +++ D L IA I+G + ++++ N + NP+ + +G++L IP + +
Sbjct: 458 HQIQRGDNLSTIA-DIYG--VSSRELMRLNGLRNPNQLVVGRSLRIP-------ITDKMT 507
Query: 170 VHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
VHY + V+ G + +LIAQ+ G +M++N + + ++L G L +P++
Sbjct: 508 VHYHRTYRVQPGDTLSLIAQRHGVTVPQVMQMNNLTNANQLRVGTELRIPIR 559
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 135 IVEANNISNPD----LI------QIGQNLTIPLPCSCDDVDN----AKVVHYAHVVEEGS 180
+VEA ISNP+ L+ Q Q+LTI L ++ + + + H ++ G
Sbjct: 405 LVEAAFISNPEDERLLVNPRFQRQFAQSLTIGLQAFLEESGHKPNWGEPLFVRHQIQRGD 464
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ + IA +G LM+LNG+ + ++L+ G L +P+
Sbjct: 465 NLSTIADIYGVSSRELMRLNGLRNPNQLVVGRSLRIPI 502
>gi|406906146|gb|EKD47393.1| peptidase M23 [uncultured bacterium]
Length = 407
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
+ GT +V YT++ D L IA G L ++ ANN+S +++ G LTI
Sbjct: 144 VIEAGTSERSQVETYTIQSGDSLSSIAS---GYDLSINTLLWANNLSVSSVLRPGNTLTI 200
Query: 156 PLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
LP VD K H V+ G + I++ + D+ T++ NG+ + L G+ L
Sbjct: 201 -LP-----VDGVK-----HTVKSGDTIGGISRTYDVDQVTILSYNGLDNSDVLSIGDELL 249
Query: 216 VPLKACNSSIKADS 229
+P A ++ ++ S
Sbjct: 250 IPGGAVQATTRSTS 263
>gi|338531550|ref|YP_004664884.1| class I chitinase [Myxococcus fulvus HW-1]
gi|337257646|gb|AEI63806.1| class I chitinase [Myxococcus fulvus HW-1]
Length = 311
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
Y+V++ D L +A+ + + N ISNP+LI GQ L IP
Sbjct: 3 TYSVRRGDTLSALAQRF---KTSVSSLAKTNGISNPNLIYAGQQLRIPDGFDAPRASGGG 59
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ V+ G + + IA + GT L K N I + + + G+ L +P
Sbjct: 60 RAASSYTVKSGDTLSGIAGRHGTSVGALAKANNISNPNLIYVGQRLTIP 108
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 85 AQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR---TIFGQLLKYQKIVEANNI 141
A + +++P +G YTVK D L IA T G L K ANNI
Sbjct: 40 AGQQLRIPDGFDAPRASGGGRAASSYTVKSGDTLSGIAGRHGTSVGALAK------ANNI 93
Query: 142 SNPDLIQIGQNLTIP 156
SNP+LI +GQ LTIP
Sbjct: 94 SNPNLIYVGQRLTIP 108
>gi|418964143|ref|ZP_13515964.1| LysM domain protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383341754|gb|EID20002.1| LysM domain protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 159
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI----PLPCSCDDVD 165
YTV++ D L IA ++G YQ++ N I+NPDLI GQ L + P S
Sbjct: 62 YTVQEGDTLSAIA-ALYG--TSYQELAAINGIANPDLIYPGQVLQVTGNPQAPSST---- 114
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ VE G + + IA +GT+ L +NGI + + G+ L +
Sbjct: 115 -------TYTVESGDTLSAIADMYGTNYQHLAAINGIENPDLIYPGQVLQI 158
>gi|386715450|ref|YP_006181773.1| spore germination protein [Halobacillus halophilus DSM 2266]
gi|384075006|emb|CCG46499.1| spore germination protein [Halobacillus halophilus DSM 2266]
Length = 470
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 134 KIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDR 193
+IV N ++NPD + IGQ+L IP P +VV+ G S IAQ+ G
Sbjct: 25 QIVLLNQLTNPDNLVIGQSLVIPDPVR------------EYVVQPGDSVYAIAQRIGVSI 72
Query: 194 DTLMKLNGIHDDSKLIAGEPLDVP 217
+ L ++N I + +++ AGE L P
Sbjct: 73 EELAEMNNITNPAQIYAGEMLIFP 96
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 92 PIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQ 151
P + + + D V Y V+ D + IA+ I + +++ E NNI+NP I G+
Sbjct: 35 PDNLVIGQSLVIPDPVREYVVQPGDSVYAIAQRIG---VSIEELAEMNNITNPAQIYAGE 91
Query: 152 NLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAG 211
L P +++H V+ G + IA ++GT + L ++N I + + + G
Sbjct: 92 MLIFP--------------YFSHEVKPGENLWSIASRYGTTVNQLAQVNSIANPALIYPG 137
Query: 212 EPLDVPLK 219
+ L +P +
Sbjct: 138 QTLRIPAR 145
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
HVV++G S I+QK+G+D + ++ LN + + L+ G+ L +P
Sbjct: 4 HVVDQGESLWRISQKYGSDMNQIVLLNQLTNPDNLVIGQSLVIP 47
>gi|242042333|ref|XP_002468561.1| hypothetical protein SORBIDRAFT_01g048095 [Sorghum bicolor]
gi|241922415|gb|EER95559.1| hypothetical protein SORBIDRAFT_01g048095 [Sorghum bicolor]
Length = 124
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 231 DNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSM-LCGDSE 289
D L V NGTY TA+ C++C+C A+N L C P Q + CP++ C
Sbjct: 2 DYNLLVPNGTYVLTADDCIQCKCSASNYEHLDCSPVQ---------GRRCPAVPTCSGGL 52
Query: 290 SLSIGNTTTSNNCNRTTCEYAGYNN---LSILTTLNSLSTCPSPSNNASR---IGS-WNL 342
+L N T +C C Y+GY N L+I T+L + A+R GS W
Sbjct: 53 TLGRNNGT---DCASRMCVYSGYTNTTSLAIHTSLVPANETACQKGGAARSEFAGSMWRT 109
Query: 343 LLISIFLVLL 352
I+ + L+
Sbjct: 110 SAIAFLMALI 119
>gi|383807025|ref|ZP_09962586.1| hypothetical protein IMCC13023_05480 [Candidatus Aquiluna sp.
IMCC13023]
gi|383299455|gb|EIC92069.1| hypothetical protein IMCC13023_05480 [Candidatus Aquiluna sp.
IMCC13023]
Length = 1028
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+ D L IA + FG + + N+ISNP+ I IGQ L IP +V A+
Sbjct: 918 YRVQSGDTLLRIA-SKFG--ISSSALQSFNSISNPNRISIGQLLKIPTSTDNTNVPQARE 974
Query: 170 -----VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V + V G + I++K G L KLNGI++ + + G+ L VP
Sbjct: 975 PDEPEVQKTYTVVSGDTIWGISRKLGVSSSALAKLNGINNSNYIRIGQVLKVP 1027
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-- 167
Y V D L+ IA + FG + + E N+ISNP+LI +GQ + IP S + A
Sbjct: 842 YRVVSGDSLNKIAAS-FG--VTAALLQEYNSISNPNLISVGQLIRIPKSGSTSQQEQAPD 898
Query: 168 ---------------KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGE 212
VV Y V+ G + IA KFG L N I + +++ G+
Sbjct: 899 VAPEQEPTPEPEPAATVVEYR--VQSGDTLLRIASKFGISSSALQSFNSISNPNRISIGQ 956
Query: 213 PLDVPLKACNSSI 225
L +P N+++
Sbjct: 957 LLKIPTSTDNTNV 969
>gi|383763893|ref|YP_005442875.1| hypothetical protein CLDAP_29380 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384161|dbj|BAM00978.1| hypothetical protein CLDAP_29380 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 315
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 21/117 (17%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP---LP------CS 160
+TV+ + L IA +G + Q I++AN I NP+ I GQ L IP +P C+
Sbjct: 56 HTVRYGETLSKIAAQ-YGVTI--QAIMQANGIWNPNRIYAGQRLCIPGAVMPPIGGPGCA 112
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
C H+V G + + IA+ +G + + NGI + + ++AG L +P
Sbjct: 113 CRTW---------HLVRHGETLSSIARWYGVSMQAIAQCNGIWNWNHIVAGTRLCIP 160
>gi|326512838|dbj|BAK03326.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 681
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 14/206 (6%)
Query: 23 STAQDFKCSAQTAAR-CQALVGYL--PPNKTTISEIQSLFTVKNLRSILGANNFPPGTPR 79
S+ + C+A A R C + V + PP ++ I+ L T ++ AN P +
Sbjct: 54 SSVLGYTCNATAAVRPCASYVVFRSSPPYESPITISYLLNTTPA--ALADANAVPTVS-- 109
Query: 80 NFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKY-QKIVEA 138
SV A + + P++C C+ G G YT++ + FI I Q L Q ++
Sbjct: 110 --SVAASRLVLAPLNCGCAPG-GYYQHNASYTLQFSNETYFITANITYQGLTTCQALMAQ 166
Query: 139 NNISNPDLIQIGQNLTIPLPCSCDDVDNAK--VVH-YAHVVEEGSSFALIAQKFGTDRDT 195
N + + +G NLT+P+ C+C A V H ++V G + A IA +F D
Sbjct: 167 NPNHDSRNLVVGNNLTVPIRCACPSPAQAASGVRHLLTYLVASGDTIADIATRFRVDAQA 226
Query: 196 LMKLNGIHDDSKLIAGEPLDVPLKAC 221
+++ N + D + L +PLK+
Sbjct: 227 VLRANRLTDSENIYPFTTLLIPLKSA 252
>gi|118468679|ref|YP_887965.1| mannose-binding lectin [Mycobacterium smegmatis str. MC2 155]
gi|399987984|ref|YP_006568333.1| LysM domain-containing protein [Mycobacterium smegmatis str. MC2
155]
gi|118169966|gb|ABK70862.1| mannose-binding lectin [Mycobacterium smegmatis str. MC2 155]
gi|399232545|gb|AFP40038.1| LysM domain protein [Mycobacterium smegmatis str. MC2 155]
Length = 208
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV D L IA +G KYQ+I +A+ I+NPDLI GQ LTIP
Sbjct: 162 YTVVSGDTLWAIAERFYGDGSKYQQIADASGIANPDLIHPGQVLTIP 208
>gi|124023865|ref|YP_001018172.1| LysM domain-containing protein [Prochlorococcus marinus str. MIT
9303]
gi|123964151|gb|ABM78907.1| possible LysM domain [Prochlorococcus marinus str. MIT 9303]
Length = 499
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+TV+ + L IA ++ Q +V N ++N D + IGQ T+ LP S A
Sbjct: 152 HTVRSGETLSIIATRYR---VRQQDLVALNGLANADTLFIGQ--TLKLPGSSSGTVRAGA 206
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKA 227
H V G + + IA ++ + LM LNG+ + + + G+ L +P A KA
Sbjct: 207 SR--HTVRSGETLSTIASRYRVRQQDLMALNGLANANHVERGQTLKLPQGAVVPKPKA 262
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 51 TISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVY 110
T+SEI + + V +LR+++ N N + + +K+P + G S +
Sbjct: 45 TLSEIATRYQV-SLRALMRLNGL--ANADNLFI--GQTLKLPGSASGTVTAGASR----H 95
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVV 170
TV+ + L IA ++ Q ++ N +SN + + IGQ L +P S A
Sbjct: 96 TVRSGETLSTIAARYR---VRQQDLIALNGLSNANNLYIGQTLKLPGAASGAIRAGAS-- 150
Query: 171 HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
H V G + ++IA ++ + L+ LNG+ + L G+ L +P + + +++A +
Sbjct: 151 --RHTVRSGETLSIIATRYRVRQQDLVALNGLANADTLFIGQTLKLP-GSSSGTVRAGAS 207
Query: 231 DNYLRVANGTYTFTANSCVKCQ 252
+ +R T + V+ Q
Sbjct: 208 RHTVRSGETLSTIASRYRVRQQ 229
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP----LPCSCDDVD 165
+TV+ + L IA ++ Q ++ N ++N + ++ GQ L +P +P
Sbjct: 209 HTVRSGETLSTIASRYR---VRQQDLMALNGLANANHVERGQTLKLPQGAVVPKPKAAAK 265
Query: 166 NAKVVHYA------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+ V A H V G + + IA + TL+K+NGI++ +KL+ G L + +K
Sbjct: 266 SKPVAIKANPNATSHTVARGQTLSQIAGAYQIPVATLIKINGINNPNKLLVGSKLALQVK 325
>gi|441210455|ref|ZP_20974606.1| mannose-binding lectin [Mycobacterium smegmatis MKD8]
gi|440626747|gb|ELQ88574.1| mannose-binding lectin [Mycobacterium smegmatis MKD8]
Length = 205
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV D L IA +G KYQ+I +A+ I+NPDLI GQ LTIP
Sbjct: 159 YTVVSGDTLWAIAERFYGDGSKYQQIADASGIANPDLIHPGQVLTIP 205
>gi|351589817|gb|AEQ49629.1| mutant Nod-factor receptor 5 [Galega officinalis]
Length = 168
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 4 FQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTV 61
F L L+L L + A LS +F C + C+ V Y+ PN +++ I +LF +
Sbjct: 13 FFLALMLFLTNISAQSQQLSRT-NFSCPVDSPPSCETYVTYIAQSPNFLSLTNISNLFDI 71
Query: 62 KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI 121
+L SI A+N + +P Q + VP+ C C+ ++ Y++K DD I
Sbjct: 72 SSL-SISKASNIDEDSKL---IPNQV-LLVPVTCGCTGNRSFANIS--YSIKTDDYYKLI 124
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
+ T+F L Y ++ AN NP+L+ + + +PL C C
Sbjct: 125 STTLFQNLTNYLEMEAANPNLNPNLLPLDAKVVVPLFCRC 164
>gi|428314632|ref|YP_007125525.1| subtilisin-like serine protease [Microcoleus sp. PCC 7113]
gi|428256230|gb|AFZ22186.1| subtilisin-like serine protease [Microcoleus sp. PCC 7113]
Length = 986
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 105 DKVPVYTVKKDDGLDFIARTIFG--QLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCD 162
D VP YTV+ D L IA+T G Y I E N I+NP L+Q GQ + IP S
Sbjct: 680 DWVP-YTVQSGDTLSEIAQTTMGNGSAPYYSFIAEHNGIANPHLLQAGQQILIPTGISAP 738
Query: 163 DVDNAKVVHYA-HVVEEGSSFALIAQKFGTDRDT-----LMKLNGIHDDSKLIAGEPLDV 216
K ++ + ++ G + + IAQ + + + NGI D + + AG+ + V
Sbjct: 739 TEFMGKYYNWVPYTIQSGDTLSEIAQTTMGNSSAPYYNFIAQKNGIADPNVIDAGQQILV 798
Query: 217 PLKAC 221
P +
Sbjct: 799 PAEVA 803
>gi|339006932|ref|ZP_08639507.1| hypothetical protein BRLA_c06820 [Brevibacillus laterosporus LMG
15441]
gi|421873340|ref|ZP_16304954.1| lysM domain protein [Brevibacillus laterosporus GI-9]
gi|338776141|gb|EGP35669.1| hypothetical protein BRLA_c06820 [Brevibacillus laterosporus LMG
15441]
gi|372457666|emb|CCF14503.1| lysM domain protein [Brevibacillus laterosporus GI-9]
Length = 302
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 17/118 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+K D L I+ FG L Q++++ N + NP+++ IG L I N K
Sbjct: 53 YTVQKGDTLSRISEQ-FGITL--QQLIQDNKLRNPNMVGIGMKLVI----------NTKE 99
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSK--LIAGEPLDVPLKACNSSI 225
+ H VE G S LIA+++ +D ++ N + L G+ L +P++A S++
Sbjct: 100 M--THTVEAGESLELIARRYQVSKDEIINHNRLLKAIPDCLYQGQRLTIPVEASGSAL 155
>gi|325953931|ref|YP_004237591.1| peptidoglycan-binding lysin domain protein [Weeksella virosa DSM
16922]
gi|323436549|gb|ADX67013.1| Peptidoglycan-binding lysin domain protein [Weeksella virosa DSM
16922]
Length = 151
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+YTVKK D L IA+ ++G ++KY KI EAN + +PD I GQ L IP
Sbjct: 100 LYTVKKGDTLSKIAKEVYGDMMKYPKIFEANKPMLKDPDKIYPGQVLYIP 149
>gi|297545285|ref|YP_003677587.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296843060|gb|ADH61576.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 333
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL-------TIPLPCSCD 162
YTV+ D L IA+ + Y+ I+ NN++ P I GQ L +P P
Sbjct: 57 YTVQPGDTLYLIAQKFN---VPYEAIIYINNLTYPYTIYPGQKLFIPGVKIVVPQPSLFP 113
Query: 163 DVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
K + V+ G + IAQKFG D L+K N + + + + AG+ L +P C+
Sbjct: 114 QPPLQKPCPTYYTVQPGDTLWTIAQKFGVSLDELIKANYLLNPNMIYAGQTLIIP---CS 170
Query: 223 SS 224
+S
Sbjct: 171 TS 172
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+ D L IA+ + I+ NNI NP LI GQ L IP+ S
Sbjct: 8 YVVQPGDTLFSIAKKFNTSV---DAIITRNNIINPSLIYPGQRLIIPVQGSY-------- 56
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V+ G + LIAQKF + ++ +N + + G+ L +P
Sbjct: 57 ----YTVQPGDTLYLIAQKFNVPYEAIIYINNLTYPYTIYPGQKLFIP 100
>gi|350564815|ref|ZP_08933631.1| cell wall hydrolase/autolysin [Thioalkalimicrobium aerophilum AL3]
gi|349777517|gb|EGZ31881.1| cell wall hydrolase/autolysin [Thioalkalimicrobium aerophilum AL3]
Length = 582
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+ +++ D L IA T +G + +++++ N + NP+ + +G+ L IP + +
Sbjct: 474 HQIQRGDNLSSIADT-YG--VSTRELMQLNGLRNPNQLVVGRTLRIP-------ITDKMT 523
Query: 170 VHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
VHY + V+ G + + IAQ+ G + +M++N + + ++L G L +P++
Sbjct: 524 VHYHRTYRVQSGDTLSRIAQRHGVSVNEIMQMNNLTNANQLRVGTELRIPIR 575
>gi|379008093|ref|YP_005257544.1| NLP/P60 protein [Sulfobacillus acidophilus DSM 10332]
gi|361054355|gb|AEW05872.1| NLP/P60 protein [Sulfobacillus acidophilus DSM 10332]
Length = 382
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEA----NNISNPDLIQIGQNLTIPLPCSCDDVD 165
YTV+ D T+FG K+ V+ N+++NP+ + +GQ LT+P S
Sbjct: 115 YTVEPGD-------TLFGIAQKFHTTVDTLVSLNHLANPNWLMVGQTLTVPAGLSASAFQ 167
Query: 166 NAKVVHYA---------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
A +VV+ G++ A IA F T L LN + + + + GE L V
Sbjct: 168 PAVTASGGAQSQSGTEKYVVQAGNTLAGIAALFHTSWQNLAALNHLGNPNVIWVGETLTV 227
Query: 217 P 217
P
Sbjct: 228 P 228
>gi|302338743|ref|YP_003803949.1| peptidase M23 [Spirochaeta smaragdinae DSM 11293]
gi|301635928|gb|ADK81355.1| Peptidase M23 [Spirochaeta smaragdinae DSM 11293]
Length = 275
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IAR+ L ++ N I +P +QIGQ L +P +
Sbjct: 27 YTVRPGDTLYSIARSFS---LSPDALMMENGIKDPTTLQIGQKLMLP---------QIEK 74
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
+ H V G + IA+++ D D L +NGI DS L G L VP+ + ++A
Sbjct: 75 EYTIHEVARGDTLYGIAREYEVDIDRLCSINGISKDSLLKIGMELKVPIVSKLPVLEAGK 134
Query: 230 FDN 232
D+
Sbjct: 135 EDD 137
>gi|339627532|ref|YP_004719175.1| peptidoglycan hydrolase [Sulfobacillus acidophilus TPY]
gi|339285321|gb|AEJ39432.1| peptidoglycan hydrolase [Sulfobacillus acidophilus TPY]
Length = 375
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEA----NNISNPDLIQIGQNLTIPLPCSCDDVD 165
YTV+ D T+FG K+ V+ N+++NP+ + +GQ LT+P S
Sbjct: 108 YTVEPGD-------TLFGIAQKFHTTVDTLVSLNHLANPNWLMVGQTLTVPAGLSASAFQ 160
Query: 166 NAKVVHYA---------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
A +VV+ G++ A IA F T L LN + + + + GE L V
Sbjct: 161 PAVTASGGAQSQSGTEKYVVQAGNTLAGIAALFHTSWQNLAALNHLGNPNVIWVGETLTV 220
Query: 217 P 217
P
Sbjct: 221 P 221
>gi|323490249|ref|ZP_08095465.1| polysaccharide deacetylase [Planococcus donghaensis MPA1U2]
gi|323396089|gb|EGA88919.1| polysaccharide deacetylase [Planococcus donghaensis MPA1U2]
Length = 398
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPLPCSCDDVD 165
YTVK D L IA+ KY V +ANNI+N +LI++GQ LTIP +
Sbjct: 242 YTVKAGDTLYSIAK-------KYNVTVSALAKANNITNYNLIRVGQVLTIPGKTTTPPAT 294
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK------ 219
K + V+ G + IA+K+ L K N I + + + G+ L +P K
Sbjct: 295 AVK-----YTVKAGDTLYGIARKYNVTVSALAKANNITNYNLIHVGQVLTIPGKSTTPPA 349
Query: 220 -ACNSSIKA-DSFDNYLRVANGT 240
+ N ++KA D+ + R N T
Sbjct: 350 TSVNYTVKAGDTLYSIARKYNST 372
>gi|169831258|ref|YP_001717240.1| cell wall hydrolase SleB [Candidatus Desulforudis audaxviator
MP104C]
gi|169638102|gb|ACA59608.1| cell wall hydrolase, SleB [Candidatus Desulforudis audaxviator
MP104C]
Length = 304
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L +A+ FG + Q + AN + N I GQ L IP+
Sbjct: 76 YTVRPGDSLFKVAQR-FG--VTVQALRTANGLGNLTTIYPGQVLNIPIASGT-------- 124
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI 225
+VV G S IA ++GTD LM+LNG+ +++ G+ L VP +++
Sbjct: 125 ----YVVRPGDSLFKIASRYGTDYRELMRLNGL-AKAEIYPGQTLRVPAGGFPAAV 175
>gi|429503548|ref|YP_007184732.1| hypothetical protein B938_00085 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485138|gb|AFZ89062.1| hypothetical protein B938_00085 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 426
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I EAN + NP+ + +GQ L IP+ + V++G + A IA +F
Sbjct: 21 IAEANKLPNPNTLVVGQTLVIPIEGQY------------YEVKQGDTLAAIAGRFHISAA 68
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
L ++NGI + L G L +P +A I+++++
Sbjct: 69 ELARVNGIQPGTTLRVGTSLYIPQQANKPDIESNAY 104
>gi|297529414|ref|YP_003670689.1| peptidoglycan-binding lysin domain-containing protein [Geobacillus
sp. C56-T3]
gi|297252666|gb|ADI26112.1| Peptidoglycan-binding lysin domain protein [Geobacillus sp. C56-T3]
Length = 470
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 15/111 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
V+ VK+ + L +A+ +G L ++IV AN +S+P+ + +GQ L IP+P
Sbjct: 3 VHVVKRGETLWQLAQR-YGVPL--ERIVAANELSDPNRLAVGQALVIPVPYRY------- 52
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
H V G + IA+++G + +++ N I + S L G L +P +
Sbjct: 53 -----HTVRTGETLWQIARQYGVAVEAIIQANRITNPSLLYPGTTLFIPAR 98
>gi|448238699|ref|YP_007402757.1| spore coat protein [Geobacillus sp. GHH01]
gi|445207541|gb|AGE23006.1| spore coat protein [Geobacillus sp. GHH01]
Length = 470
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 15/111 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
V+ VK+ + L +A+ +G L ++IV AN +S+P+ + +GQ L IP+P
Sbjct: 3 VHVVKRGETLWQLAQR-YGVPL--ERIVAANELSDPNRLAVGQALVIPVPYRY------- 52
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
H V G + IA+++G + +++ N I + S L G L +P +
Sbjct: 53 -----HTVRTGETLWQIARQYGVAVEAIIQANRITNPSLLYPGTTLFIPAR 98
>gi|261417721|ref|YP_003251403.1| peptidoglycan-binding lysin domain protein [Geobacillus sp.
Y412MC61]
gi|319767467|ref|YP_004132968.1| glycoside hydrolase family protein [Geobacillus sp. Y412MC52]
gi|261374178|gb|ACX76921.1| Peptidoglycan-binding lysin domain protein [Geobacillus sp.
Y412MC61]
gi|317112333|gb|ADU94825.1| glycoside hydrolase family 18 [Geobacillus sp. Y412MC52]
Length = 470
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 15/111 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
V+ VK+ + L +A+ +G L ++IV AN +S+P+ + +GQ L IP+P
Sbjct: 3 VHVVKRGETLWQLAQR-YGVPL--ERIVAANELSDPNRLAVGQALVIPVPYRY------- 52
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
H V G + IA+++G + +++ N I + S L G L +P +
Sbjct: 53 -----HTVRTGETLWQIARQYGVAVEAIIQANRITNPSLLYPGTTLFIPAR 98
>gi|373124002|ref|ZP_09537844.1| hypothetical protein HMPREF0982_02773 [Erysipelotrichaceae
bacterium 21_3]
gi|371659834|gb|EHO25094.1| hypothetical protein HMPREF0982_02773 [Erysipelotrichaceae
bacterium 21_3]
Length = 324
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 93 IHCICSNGTGVSDK--VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIG 150
I I + GV+ K +TV K D L IA+ +G KY +I ANNI+NP++I +G
Sbjct: 259 IQSIVNARLGVTPKPSAKYHTVVKGDTLWAIAKKYYGDGNKYPEIARANNIANPNIISVG 318
Query: 151 QNLTIP 156
Q L IP
Sbjct: 319 QKLLIP 324
>gi|147677358|ref|YP_001211573.1| hypothetical protein PTH_1023 [Pelotomaculum thermopropionicum SI]
gi|146273455|dbj|BAF59204.1| hypothetical protein PTH_1023 [Pelotomaculum thermopropionicum SI]
Length = 301
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 97 CSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
C GT + YTV + D L IA +G ++ K E N + N D IQ+GQNL IP
Sbjct: 24 CFPGTAAAAGSFTYTVAEGDCLWLIAGR-YGTTVETLK--ELNGL-NSDFIQVGQNLIIP 79
Query: 157 -LPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
P S D + + V G LIA K GT + + + NG+ D L G+ L
Sbjct: 80 GEPSSAQDNYGSNSATACYTVTSGDCLWLIASKTGTTVEAIKEANGLESD-MLQVGQVLV 138
Query: 216 VP 217
+P
Sbjct: 139 IP 140
>gi|56420953|ref|YP_148271.1| spore peptidoglycan hydrolase [Geobacillus kaustophilus HTA426]
gi|56380795|dbj|BAD76703.1| spore peptidoglycan hydrolase (N-acetylglucosaminidase)
[Geobacillus kaustophilus HTA426]
Length = 470
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 15/111 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
V+ VK+ + L +A+ +G L ++IV AN +S+P+ + +GQ L IP+P
Sbjct: 3 VHVVKRGETLWQLAQR-YGVPL--ERIVAANELSDPNRLAVGQALVIPVPYRY------- 52
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
H V G + IA+++G + +++ N I + S L G L +P +
Sbjct: 53 -----HTVRTGETLWQIARQYGVAVEAIIQANRITNPSLLYPGTTLFIPAR 98
>gi|328949038|ref|YP_004366375.1| peptidase M23 [Treponema succinifaciens DSM 2489]
gi|328449362|gb|AEB15078.1| Peptidase M23 [Treponema succinifaciens DSM 2489]
Length = 333
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 59 FTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGL 118
F V + ++ G F T + S +P+ N +G+S Y VKK D +
Sbjct: 46 FGVVHFKNSSGQGGFDSNTSSHISTEIFSGEDIPVQP-EYNDSGLS--YISYRVKKGDMI 102
Query: 119 DFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP-LPCSCDDVDNAKVVHYAHVVE 177
FIA FG + I+ NNI LIQIGQ L IP +P + YA V E
Sbjct: 103 GFIADE-FG--VTQDTIISVNNIHASRLIQIGQYLKIPSMPG----------ILYA-VRE 148
Query: 178 EGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+G + I++K+ D +N + KL AG+ L VP
Sbjct: 149 DGETVESISKKYNVDAQKCSSVNNLGLSEKLSAGKSLFVP 188
>gi|385267042|ref|ZP_10045129.1| Glycosyl hydrolases family 18 [Bacillus sp. 5B6]
gi|385151538|gb|EIF15475.1| Glycosyl hydrolases family 18 [Bacillus sp. 5B6]
Length = 426
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I EAN + NP+ + +GQ L IP+ + V++G + A IA +F
Sbjct: 21 IAEANKLPNPNTLVVGQTLVIPIEGQY------------YEVKQGDTLAAIAGRFHISAA 68
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
L ++NGI + L G L +P +A I+++++
Sbjct: 69 ELARVNGIQPGTTLRVGTRLYIPQQANKPDIESNAY 104
>gi|426403053|ref|YP_007022024.1| membrane-bound lytic murein transglycosylase D [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425859721|gb|AFY00757.1| membrane-bound lytic murein transglycosylase D precursor
[Bdellovibrio bacteriovorus str. Tiberius]
Length = 520
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 30/234 (12%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLF--TVKNLR 65
L+L + A S ++ ++ F Q A Y + T+S + + TV LR
Sbjct: 288 LILRIPPGTAEQSKVAASESFVSRVQFVADTGDTQTYRIRHGDTLSTVARRYRTTVAFLR 347
Query: 66 SILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV---------------Y 110
+ N+ P P + Q P + P+ + + V+ K V Y
Sbjct: 348 DL---NDLPRRKPLRVGMRIQVPDRTPLKDRSQSRSMVAKKSAVEAPRNTVTVSSDGRYY 404
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA--- 167
V+ D L IAR + + Q++ NNI +++G L +P P S + A
Sbjct: 405 IVQSGDSLFTIARKYSTSVSELQRM---NNIRRGRTLKVGMKLKVPTPGSSSAREVATEV 461
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
K HVV G + ++IA K+ + + N I + + L+ G + +P
Sbjct: 462 AQSKKTKSKVHVVRRGENLSVIAAKYNVAVSDIKEKNNIRNPASLMVGARIVIP 515
>gi|375009500|ref|YP_004983133.1| peptidoglycan-binding lysin domain-containing protein [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359288349|gb|AEV20033.1| Peptidoglycan-binding lysin domain protein [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 470
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 15/111 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
V+ VK+ + L +A+ +G L ++IV AN +S+P+ + +GQ L IP+P
Sbjct: 3 VHVVKRGETLWQLAQR-YGVPL--ERIVAANELSDPNRLAVGQALVIPVPYRY------- 52
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
H V G + IA+++G + +++ N I + S L G L +P +
Sbjct: 53 -----HTVRTGETLWQIARQYGVAVEAIIQANRITNPSLLYPGTTLFIPAR 98
>gi|254413069|ref|ZP_05026841.1| M23 peptidase domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196180233|gb|EDX75225.1| M23 peptidase domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 819
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 85 AQKPIKVPI--HCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS 142
AQ P P+ + +N + Y VK D +D IAR +G L ++++AN ++
Sbjct: 397 AQPPTPQPVVMETVVANRAATN----TYEVKPGDTVDAIARR-YG--LSRSELIQANGLN 449
Query: 143 NPDLIQIGQNLTIPLPCSCDDVD 165
NP+LI++ Q LTIP P S + +
Sbjct: 450 NPNLIRVNQQLTIPTPPSAESSE 472
>gi|154253473|ref|YP_001414297.1| peptidase M23B [Parvibaculum lavamentivorans DS-1]
gi|154157423|gb|ABS64640.1| peptidase M23B [Parvibaculum lavamentivorans DS-1]
Length = 328
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 24/133 (18%)
Query: 92 PIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQ 151
PI + GT Y VK+ D + IAR + + I++ N + P I++GQ
Sbjct: 52 PIERVSPGGT--------YVVKRGDTVYSIARA---HDVPLRSIIDTNGLRPPYDIRVGQ 100
Query: 152 NLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAG 211
L+IP HVV+ G + I++ + D +L LN I + G
Sbjct: 101 KLSIP-------------AGRFHVVQRGETVYSISRLYNVDTTSLTSLNRIQPPYTIKVG 147
Query: 212 EPLDVPLKACNSS 224
E L VP +A ++
Sbjct: 148 EKLQVPSRATQTA 160
>gi|357483205|ref|XP_003611889.1| LysM-domain containing receptor-like kinase [Medicago truncatula]
gi|94982942|gb|ABF50224.1| Nod factor perception protein [Medicago truncatula]
gi|355513224|gb|AES94847.1| LysM-domain containing receptor-like kinase [Medicago truncatula]
gi|357394655|gb|AET75784.1| NFP [Cloning vector pHUGE-MtNFS]
Length = 595
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 27 DFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVP 84
+F C + C+ V Y PN ++S I +F + LR I A+N + +P
Sbjct: 36 NFTCPVDSPPSCETYVAYRAQSPNFLSLSNISDIFNLSPLR-IAKASNIEAEDKK--LIP 92
Query: 85 AQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
Q + VP+ C C+ ++ Y++K+ D ++ T + L Y + N +P
Sbjct: 93 DQL-LLVPVTCGCTKNHSFAN--ITYSIKQGDNFFILSITSYQNLTNYLEFKNFNPNLSP 149
Query: 145 DLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLN 200
L+ + +++PL C C + K + Y +V ++ + L++ KFG + ++ N
Sbjct: 150 TLLPLDTKVSVPLFCKCPSKNQLNKGIKYLITYVWQDNDNVTLVSSKFGASQVEMLAEN 208
>gi|374854634|dbj|BAL57511.1| lyzozyme [uncultured Chloroflexi bacterium]
Length = 324
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 131 KYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFG 190
KY V ++NP L+++G+ LTIP P + ++A +VV+ G + IA KF
Sbjct: 239 KYGVTVRELVMANPQLLKVGEKLTIPAPLAIPQ-ESASPGPKTYVVQPGDTLTSIAIKFN 297
Query: 191 TDRDTLMKLNGIHDDSKLIAGEPLDVP 217
T L+ N + D + ++ G+ L +P
Sbjct: 298 TTIPALVAANRLSDPNTIVVGQTLVIP 324
>gi|303245716|ref|ZP_07331999.1| Peptidoglycan-binding lysin domain protein [Desulfovibrio
fructosovorans JJ]
gi|302492979|gb|EFL52844.1| Peptidoglycan-binding lysin domain protein [Desulfovibrio
fructosovorans JJ]
Length = 716
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 102 GVSDKVPVYTVKKDDGLDFIAR-----TIFGQL-LKYQKIVEANNISNPDLIQIGQNLTI 155
G + PV+ DDG +A +I +L + + +AN NP +Q GQ L++
Sbjct: 440 GAASGAPVHVA--DDGRYVVADGDNFWSIAHRLGIDVAALTQANAAVNPQKLQPGQVLSL 497
Query: 156 PLPCSCDDVDNAKVVHYAHV-------VEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKL 208
P D D+A + V V +G + ++++FG D DTL+ +NG D S+L
Sbjct: 498 PGVSKADSGDHAPALESRTVGDAALYPVAKGDTLWGLSRRFGVDLDTLLTVNGEVDPSRL 557
Query: 209 IAGEPLDVP 217
G+ + +P
Sbjct: 558 QVGQLVTIP 566
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 74/190 (38%), Gaps = 9/190 (4%)
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
+P K P + + YTV D L +A+ + + + +AN +P
Sbjct: 307 RPAKTPEVAVAAAKPASPATAAAYTVADGDTLWSVAKRLG---VSADALTQANPGVDPRR 363
Query: 147 IQIGQNLTIPLPCSCDDVDNAKVVH-----YAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
+ IGQ+L++P + + + H+V EG ++ +A+++ L N
Sbjct: 364 MSIGQSLSVPAGGAMVAAAASATQSALAAGHGHIVAEGDNYWSVARRYDVSVAALTAANP 423
Query: 202 IHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTL 261
D ++L G+ L +P A + + Y+ VA+G ++ + A
Sbjct: 424 GVDPTRLRIGQELVIPGAASGAPVHVADDGRYV-VADGDNFWSIAHRLGIDVAALTQANA 482
Query: 262 QCKPSQFQPS 271
P + QP
Sbjct: 483 AVNPQKLQPG 492
>gi|84685499|ref|ZP_01013397.1| LysM domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666656|gb|EAQ13128.1| LysM domain protein [Rhodobacterales bacterium HTCC2654]
Length = 284
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+YTV+ D L +IA + +Y++I EAN ++NP LI++GQ L IP
Sbjct: 234 IYTVESGDSLAYIALVFYRDAAQYERIYEANRDVLANPSLIRVGQKLRIP 283
>gi|228996331|ref|ZP_04155975.1| Cell wall hydrolase [Bacillus mycoides Rock3-17]
gi|228763435|gb|EEM12338.1| Cell wall hydrolase [Bacillus mycoides Rock3-17]
Length = 265
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
PI + SN G ++ VYTVKK+D L + T +G L Q I +AN+ +N D I
Sbjct: 11 PISAATITLVSN-QGTANAATVYTVKKNDTL-WDLSTHYGVSL--QAIKQANHKTN-DRI 65
Query: 148 QIGQNLTIPL-PCSCDDVDNAKVV---HYAHV---VEEGSSFALIAQKFGTDRDTLMKLN 200
IG+ LTIP+ P S + V H A + V+ G + IA+++ ++ + N
Sbjct: 66 YIGEQLTIPVSPSSSESTQQKDVAASNHSAQIVYQVQRGDTLEAIAKRYNVSIQSIRQAN 125
Query: 201 GIHDDSKLIAGEPL 214
+ D ++ AG+ L
Sbjct: 126 NTNGD-RIYAGQHL 138
>gi|333994311|ref|YP_004526924.1| LysM domain/M23/M37 peptidase domain-containing protein [Treponema
azotonutricium ZAS-9]
gi|333734557|gb|AEF80506.1| LysM domain/M23/M37 peptidase domain protein [Treponema
azotonutricium ZAS-9]
Length = 262
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
HVV++G + IA+ F D+D LMK NGI D +KL AG+ L +P
Sbjct: 8 HVVQKGDTIYSIARAFFVDKDELMKYNGITDPTKLQAGQRLRIP 51
>gi|220933035|ref|YP_002509943.1| Peptidoglycan-binding LysM [Halothermothrix orenii H 168]
gi|219994345|gb|ACL70948.1| Peptidoglycan-binding LysM [Halothermothrix orenii H 168]
Length = 409
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 93 IHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQN 152
I I N TG + YTVK D L +A+ + + +V+ NN+ I IGQ
Sbjct: 80 IITIGDNQTGQNQNTHKYTVKPGDTLWKLAQKFNTSITE---LVDLNNLEQYS-IYIGQK 135
Query: 153 LTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGE 212
L IP + ++ +N ++Y ++ G IAQK+ T + L++LN I D L G
Sbjct: 136 LQIPSSNAPENDNN--FIYYT--IQPGDILWNIAQKYDTTVEQLIELNNIKDAYDLYPGR 191
Query: 213 PLDVPLKACNS 223
L VPL N+
Sbjct: 192 KLLVPLSGGNT 202
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKY----QK 134
+S+ + +++P SN + YT++ D L IA+ KY ++
Sbjct: 126 EQYSIYIGQKLQIP----SSNAPENDNNFIYYTIQPGDILWNIAQ-------KYDTTVEQ 174
Query: 135 IVEANNISNPDLIQIGQNLTIPL-----PCSCDDVDNAKV---VHYAHVVEEGSSFALIA 186
++E NNI + + G+ L +PL P + + + V +Y + ++EG IA
Sbjct: 175 LIELNNIKDAYDLYPGRKLLVPLSGGNTPAGQETSNPSSVPYTAYYFYKIQEGDKIWKIA 234
Query: 187 QKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNS----SIKADSFDNYLRVAN 238
FG L+ N I + +++ G+ L +PL+ A NY RV N
Sbjct: 235 DTFGVRVSELVGYNNIENINQIQTGQILIIPLEKSTKLSYVQKAAAKLKNYYRVKN 290
>gi|421184095|ref|ZP_15641522.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB318]
gi|399968329|gb|EJO02781.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB318]
Length = 489
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI--------PLPCSC 161
YTV D L IA+ +G + I ANNISNPD I +G+ LTI P S
Sbjct: 378 YTVASGDTLTSIAKA-YGTTVS--AIATANNISNPDYIYVGEVLTIGSSTSTSTSTPTSS 434
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ ++ V G + A IA+ +G TL KLN I + + + AG L +
Sbjct: 435 TSSSSTSSSSKSYTVASGDTLASIAKAYGVSISTLAKLNNISNTNLIYAGTTLKI 489
>gi|333990551|ref|YP_004523165.1| mannose-binding lectin [Mycobacterium sp. JDM601]
gi|333486519|gb|AEF35911.1| mannose-binding lectin [Mycobacterium sp. JDM601]
Length = 190
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV D L IA +G KY +I EA+ I+NPDLI GQ LTIP
Sbjct: 144 YTVVSGDTLFAIAERFYGDGNKYPQIAEASGIANPDLIHPGQELTIP 190
>gi|222148101|ref|YP_002549058.1| hypothetical protein Avi_1474 [Agrobacterium vitis S4]
gi|221735089|gb|ACM36052.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 663
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 112 VKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+++ D L I+R ++GQ ++Y I AN ISNPDLI+ GQ T+P D D A+
Sbjct: 595 IRRGDTLWQISRRVYGQGVRYTTIYVANAEQISNPDLIEPGQTFTVPDQSMPD--DEAEK 652
Query: 170 VHYAHVVE 177
+H ++E
Sbjct: 653 IHRKWMLE 660
>gi|297825285|ref|XP_002880525.1| hypothetical protein ARALYDRAFT_481239 [Arabidopsis lyrata subsp.
lyrata]
gi|297326364|gb|EFH56784.1| hypothetical protein ARALYDRAFT_481239 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 38 CQALVGYLP-PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCI 96
CQA V + P +T+S I SLF+V S+L + N + S P+ + + +P+ C
Sbjct: 53 CQAYVIFRSTPPFSTVSSISSLFSVD--PSLLSSLN---AASTSTSFPSGQQVIIPLTCS 107
Query: 97 CSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
C ++ YT+K +D IA L Q + + NN+S+ L+ G + +P
Sbjct: 108 CFGDNSQANLT--YTIKPNDSYFAIANDTLQGLSTCQALEKQNNVSSQSLLP-GMRIVVP 164
Query: 157 LPCSCDDVD--NAKVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGI-HDDSKLIAG 211
+ C+C N V Y ++ V + A+I+++FG + ++ N + ++S++
Sbjct: 165 IRCACPTAKQVNEDGVKYLMSYTVVFDDTIAIISERFGVETSKTLEANEMSFENSEVFPF 224
Query: 212 EPLDVPL 218
+ +PL
Sbjct: 225 TTILIPL 231
>gi|291542497|emb|CBL15607.1| Predicted glycosyl hydrolase [Ruminococcus bromii L2-63]
Length = 101
Score = 47.8 bits (112), Expect = 0.009, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 18/110 (16%)
Query: 110 YTVKKDDGLDFIAR---TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
YTV+ + L IA+ T +LKY NNI PD I +GQ LT+P +
Sbjct: 6 YTVRPGNTLFGIAQFFQTTVNDILKY------NNIQTPDAIFVGQVLTVP-------AGS 52
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
A+ + HV G S +IAQ GT + L +LNG+ + + + G+ + V
Sbjct: 53 AETQY--HVARPGDSLWIIAQMHGTTVENLSRLNGLSNPNVIYPGQIIKV 100
>gi|144899897|emb|CAM76761.1| Peptidase M23B [Magnetospirillum gryphiswaldense MSR-1]
Length = 358
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 30/190 (15%)
Query: 92 PIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQ 151
P+ + G S V VY D L IAR + + ++E NN++ P +I G
Sbjct: 48 PVSRGAPSSQGCSGAVTVYV---GDTLYSIARRCN---VSVRDLIEINNLAAPYVISPGM 101
Query: 152 NLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAG 211
L +P +VV+ G + +LIA++ G + TL +LNG + G
Sbjct: 102 QLRMPGGGE-------------YVVQRGDALSLIARRLGVEFQTLARLNGKAAPYTIFVG 148
Query: 212 EPLDVPLKACNSSIKADSFDNYLRVAN------GTYTFTANSCVKCQC-----DATNNWT 260
E L +P +++ L +A+ G TA++ V+ Q A N
Sbjct: 149 EKLRLPGGRGGATVATTGTGGALVIASPNSTRKGAEPSTASTRVQSQAAAPVGTAEGNTA 208
Query: 261 LQCKPSQFQP 270
+ + F+P
Sbjct: 209 PEARHPAFEP 218
>gi|299535506|ref|ZP_07048827.1| spore germination protein [Lysinibacillus fusiformis ZC1]
gi|298728706|gb|EFI69260.1| spore germination protein [Lysinibacillus fusiformis ZC1]
Length = 469
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
+YTV+K D L IA+ L Q I+ N+++NPDL+ G L IP P
Sbjct: 52 IYTVQKGDTLWSIAQKFSVPL---QSIIIENHLTNPDLLTPGTKLIIP-PI--------- 98
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKAD 228
H V+ G + IAQ++GT + N +++ + L G L +P K + A
Sbjct: 99 ----VHNVQPGETLWQIAQRYGTTVQAIAVENNLNNPNMLYVGSQLMIPRKLPMIEVNAY 154
Query: 229 SF 230
S+
Sbjct: 155 SY 156
>gi|375360707|ref|YP_005128746.1| Spore germination protein yaaH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371566701|emb|CCF03551.1| Spore germination protein yaaH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 426
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I EAN + NP+ + +GQ L IP+ + V++G + A IA +F
Sbjct: 21 IAEANKLPNPNTLVVGQTLVIPIEGQY------------YEVKQGDTLASIAGRFHISAA 68
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
L ++NGI + L G L +P +A I+++++
Sbjct: 69 ELARVNGIQPGTTLRVGTRLYIPQQANKPDIESNAY 104
>gi|421729489|ref|ZP_16168620.1| Spore germination protein yaaH [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451348594|ref|YP_007447225.1| Spore germination protein yaaH [Bacillus amyloliquefaciens IT-45]
gi|407076655|gb|EKE49637.1| Spore germination protein yaaH [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449852352|gb|AGF29344.1| Spore germination protein yaaH [Bacillus amyloliquefaciens IT-45]
Length = 426
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I EAN + NP+ + +GQ L IP+ + V++G + A IA +F
Sbjct: 21 IAEANKLPNPNTLVVGQTLVIPIEGQY------------YEVKQGDTLASIAGRFHISAA 68
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
L ++NGI + L G L +P +A I+++++
Sbjct: 69 ELARVNGIQPGTTLRVGTRLYIPQQANKPDIESNAY 104
>gi|422428818|ref|ZP_16505726.1| LysM domain protein [Propionibacterium acnes HL072PA2]
gi|314980652|gb|EFT24746.1| LysM domain protein [Propionibacterium acnes HL072PA2]
Length = 1036
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ +D L IA +G ++++I EA+ I +++GQ L +P+P +N
Sbjct: 164 YTVRANDYLWKIAEHYYGDGAQFRRIAEASGIDPHSELKVGQKLILPVP------ENTAA 217
Query: 170 VHYAHVVEEGSSFALIAQKF---GTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
VH V+ G IA+ + G + + +GI S L G+ L +P
Sbjct: 218 VHS---VKAGEYLWEIAEHYYGDGAQYHKIAEASGIDAHSDLAVGQKLVIP 265
>gi|383761491|ref|YP_005440473.1| hypothetical protein CLDAP_05360 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381759|dbj|BAL98575.1| hypothetical protein CLDAP_05360 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 145
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
V + V+ + L I+R I+G + I + N I NP LI +GQ L IP
Sbjct: 38 VAFHWVRPGENLTRISR-IYG--VSVWHIAQVNGIRNPSLIYVGQVLCIPSTYHPPAPPP 94
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V+ G + + IA++ G +L+ LNGI + + + AG+ L +
Sbjct: 95 PAFCGQYYTVQLGDTLSRIARRCGVTVRSLVSLNGISNPNYIRAGQVLRI 144
>gi|404424307|ref|ZP_11005898.1| mannose-binding lectin [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403651776|gb|EJZ06875.1| mannose-binding lectin [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 204
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV D L IA +G +YQ+I +A+ I+NPDLI GQ LTIP
Sbjct: 158 YTVVSGDTLWAIAERFYGDGNRYQQIADASGIANPDLIHPGQVLTIP 204
>gi|420864732|ref|ZP_15328121.1| lysM domain protein [Mycobacterium abscessus 4S-0303]
gi|420869521|ref|ZP_15332903.1| lysM domain protein [Mycobacterium abscessus 4S-0726-RA]
gi|420873966|ref|ZP_15337342.1| lysM domain protein [Mycobacterium abscessus 4S-0726-RB]
gi|420988243|ref|ZP_15451399.1| lysM domain protein [Mycobacterium abscessus 4S-0206]
gi|421041929|ref|ZP_15504937.1| lysM domain protein [Mycobacterium abscessus 4S-0116-R]
gi|421044320|ref|ZP_15507320.1| lysM domain protein [Mycobacterium abscessus 4S-0116-S]
gi|392063448|gb|EIT89297.1| lysM domain protein [Mycobacterium abscessus 4S-0303]
gi|392065441|gb|EIT91289.1| lysM domain protein [Mycobacterium abscessus 4S-0726-RB]
gi|392068991|gb|EIT94838.1| lysM domain protein [Mycobacterium abscessus 4S-0726-RA]
gi|392182522|gb|EIV08173.1| lysM domain protein [Mycobacterium abscessus 4S-0206]
gi|392222857|gb|EIV48380.1| lysM domain protein [Mycobacterium abscessus 4S-0116-R]
gi|392233773|gb|EIV59271.1| lysM domain protein [Mycobacterium abscessus 4S-0116-S]
Length = 229
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L ++ +G +Y+ I N++S+PDLI++GQ L IP
Sbjct: 15 YTVRSGDTLWKLSEMFYGDGRRYRVIAVVNDLSDPDLIEVGQELEIPY------------ 62
Query: 170 VHYAHVVEEGSSFALIAQKF 189
V Y + V+ G + + IA+ F
Sbjct: 63 VTYRYQVKAGDTKSSIAEHF 82
>gi|183983753|ref|YP_001852044.1| hypothetical protein MMAR_3773 [Mycobacterium marinum M]
gi|183177079|gb|ACC42189.1| conserved protein [Mycobacterium marinum M]
Length = 209
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV D L IA +G KYQ I EA+ ++NPDLI G+ LTIP
Sbjct: 163 YTVVSGDTLWAIAERFYGDGSKYQVIAEASGVANPDLIHPGEVLTIP 209
>gi|169829519|ref|YP_001699677.1| spore germination protein [Lysinibacillus sphaericus C3-41]
gi|168994007|gb|ACA41547.1| Spore germination protein [Lysinibacillus sphaericus C3-41]
Length = 469
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA+ FG L + I+ N+++NPD++ G L IP P
Sbjct: 53 YTVKSGDTLWAIAQQ-FGVPL--EAIIADNHLTNPDMLTPGTKLIIP-PI---------- 98
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
H+VE G + IAQ++ T ++ +N I++ + + G L +P K + A S
Sbjct: 99 ---IHIVEPGETLWQIAQEYETTIQAIVAVNHINNPNMIYVGAQLIIPRKLPLIEVNAYS 155
Query: 230 F 230
+
Sbjct: 156 Y 156
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
Q I N ++ PD + IGQ+L IP P + + V+ G + IAQ+FG
Sbjct: 24 QSITLLNALATPDQLAIGQSLVIPSPYTT------------YTVKSGDTLWAIAQQFGVP 71
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVP 217
+ ++ N + + L G L +P
Sbjct: 72 LEAIIADNHLTNPDMLTPGTKLIIP 96
>gi|118618981|ref|YP_907313.1| hypothetical protein MUL_3720 [Mycobacterium ulcerans Agy99]
gi|443491996|ref|YP_007370143.1| conserved LysM domain protein [Mycobacterium liflandii 128FXT]
gi|118571091|gb|ABL05842.1| conserved protein [Mycobacterium ulcerans Agy99]
gi|442584493|gb|AGC63636.1| conserved LysM domain protein [Mycobacterium liflandii 128FXT]
Length = 207
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV D L IA +G KYQ I EA+ ++NPDLI G+ LTIP
Sbjct: 161 YTVVSGDTLWAIAERFYGDGSKYQVIAEASGVANPDLIHPGEVLTIP 207
>gi|392941010|ref|ZP_10306654.1| spore coat assembly protein SafA [Thermoanaerobacter siderophilus
SR4]
gi|392292760|gb|EIW01204.1| spore coat assembly protein SafA [Thermoanaerobacter siderophilus
SR4]
Length = 199
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNA 167
+YTVK D + IA +FG + ++ AN IS+P+LI GQ + IP C +
Sbjct: 93 IYTVKPGDSMWSIAN-MFG--ISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETC 149
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI 209
K + + V+ G S IA FG D L++ N D LI
Sbjct: 150 KTI---YTVKPGDSMWSIANMFGVSLDALIRANPQIPDPNLI 188
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTV+ D + IA +FG + ++ AN IS+P+LI GQ + IP C + K
Sbjct: 35 YTVQPGDTMWSIAN-MFG--ISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETCK 91
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG-IHDDSKLIAGEPLDVPL-------KA 220
+ + V+ G S IA FG D L++ N I D + + G+ + +P +
Sbjct: 92 TI---YTVKPGDSMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPET 148
Query: 221 CNSSIKADSFDNYLRVAN 238
C + D+ +AN
Sbjct: 149 CKTIYTVKPGDSMWSIAN 166
>gi|354725200|ref|ZP_09039415.1| LysM domain/BON superfamily protein [Enterobacter mori LMG 25706]
Length = 146
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
T D+ YTVK D L I++T++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 87 TDAEDEATYYTVKSGDTLSAISKTVYGNANQYNKIFEANRPMLSSPDKIYPGQTLRIP 144
>gi|242243355|ref|ZP_04797800.1| autolysin (N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis W23144]
gi|416127725|ref|ZP_11597042.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
FRI909]
gi|418329663|ref|ZP_12940717.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
14.1.R1.SE]
gi|418613714|ref|ZP_13176715.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU118]
gi|418631197|ref|ZP_13193666.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU128]
gi|418634878|ref|ZP_13197269.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU129]
gi|420176563|ref|ZP_14682983.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM061]
gi|420178399|ref|ZP_14684731.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM057]
gi|420179152|ref|ZP_14685452.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM053]
gi|420190549|ref|ZP_14696490.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM037]
gi|420200166|ref|ZP_14705828.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM031]
gi|420205831|ref|ZP_14711354.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM015]
gi|420235827|ref|ZP_14740361.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH051475]
gi|242233304|gb|EES35616.1| autolysin (N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis W23144]
gi|319399751|gb|EFV87999.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
FRI909]
gi|365229911|gb|EHM71036.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
14.1.R1.SE]
gi|374822829|gb|EHR86842.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU118]
gi|374835583|gb|EHR99182.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU128]
gi|374836420|gb|EHS00008.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU129]
gi|394241107|gb|EJD86528.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM061]
gi|394246589|gb|EJD91845.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM057]
gi|394254540|gb|EJD99508.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM053]
gi|394258482|gb|EJE03362.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM037]
gi|394269516|gb|EJE14050.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM015]
gi|394270215|gb|EJE14736.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM031]
gi|394302139|gb|EJE45588.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH051475]
Length = 324
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRTKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTATY--TVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
>gi|420192552|ref|ZP_14698411.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM023]
gi|394261282|gb|EJE06082.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM023]
Length = 324
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRTKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTATY--TVKYGDSLSTIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
>gi|335040114|ref|ZP_08533251.1| NLP/P60 protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180008|gb|EGL82636.1| NLP/P60 protein [Caldalkalibacillus thermarum TA2.A1]
Length = 334
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDD-- 163
+ YTVK D L IAR + + + + NN+ + DLI++GQ L IP P S +
Sbjct: 89 QAATYTVKSGDSLWKIARNYNTTVAQLKSL---NNLRS-DLIRVGQVLKIPGPTSSTNAS 144
Query: 164 -----VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
V++ V + V+ G S IA+++ T + L LN + D+ + G+ L VP
Sbjct: 145 KSSVTVESKPVSATTYKVKPGDSLWKIAREYNTSVNQLKALNKLTSDT-IYVGQVLKVPS 203
Query: 219 KACNS 223
+ S
Sbjct: 204 QTGQS 208
>gi|221633912|ref|YP_002523138.1| lipoprotein [Thermomicrobium roseum DSM 5159]
gi|221157221|gb|ACM06348.1| lipoprotein precursor [Thermomicrobium roseum DSM 5159]
Length = 542
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 16/115 (13%)
Query: 105 DKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV 164
D+V +YTV++ D L IA+ FG LK Q I AN++ +P+LI GQ L I LP V
Sbjct: 290 DRVVMYTVQEGDTLWKIAQR-FG--LKVQTITWANSLPDPELIYPGQQLAI-LPTDGVMV 345
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTL--MKLNGIHDDSKLIAGEPLDVP 217
V+EG + +A+ +G + D + +NGI + L G+ + +P
Sbjct: 346 K----------VKEGDTIESLAKYWGVEPDAIRNYPMNGIGPNGVLRVGQLVMIP 390
>gi|317500984|ref|ZP_07959194.1| glycosyl hydrolase, family 25 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089061|ref|ZP_08337966.1| hypothetical protein HMPREF1025_01549 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439271|ref|ZP_08618886.1| hypothetical protein HMPREF0990_01280 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316897687|gb|EFV19748.1| glycosyl hydrolase, family 25 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330406222|gb|EGG85744.1| hypothetical protein HMPREF1025_01549 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336016188|gb|EGN45977.1| hypothetical protein HMPREF0990_01280 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 324
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YT++ D L IA FG + + N IS+P+LI G L IP N+
Sbjct: 227 YTIQPGDTLSEIAER-FGTTVS--SLSALNGISDPNLIYAGNTLRIP------QGGNSAS 277
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
V+Y ++ G + + IA++FGT +L LNGI D + + AG L
Sbjct: 278 VYY--TIQPGDTLSEIAERFGTTVASLSALNGISDPNLIYAGNTL 320
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI 225
+ ++ G + + IA++FGT +L LNGI D + + AG L +P ++S+
Sbjct: 227 YTIQPGDTLSEIAERFGTTVSSLSALNGISDPNLIYAGNTLRIPQGGNSASV 278
>gi|164686315|ref|ZP_02210345.1| hypothetical protein CLOBAR_02753 [Clostridium bartlettii DSM
16795]
gi|164601917|gb|EDQ95382.1| glycosyl hydrolase family 25 [Clostridium bartlettii DSM 16795]
Length = 454
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKY----QKIVEANNISNPDLIQIGQNLTIPLPCSCD 162
V YTV++ D L IA+ KY +I N+I NP+LI +G+ L I P +
Sbjct: 228 VIYYTVQEGDTLTSIAQ-------KYDTTVHEITVTNSIVNPNLIYVGEVLKI-YPGNRS 279
Query: 163 DVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ KV ++V+ G + IA KF T + +LN + + + + GE L +P
Sbjct: 280 IIKRKKVFTTTYIVQSGDTLTSIAIKFDTTVQAIAELNDLQNPNLIYVGEILKIP 334
>gi|383636321|ref|ZP_09950727.1| cell-wall-binding phage-encoded protein [Streptomyces chartreusis
NRRL 12338]
Length = 310
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 30/168 (17%)
Query: 63 NLRSILGANNFPPGT--PRNFSVPAQKPI------KVPIHCICSNGTGVSDKVPVYTVKK 114
N RS++G + PG PR F++ + + K P S GV+ YTV+K
Sbjct: 162 NERSVIGHLEWQPGKVDPRGFTMTSMRSRIRARLGKKPTPGGSSGSAGVT-----YTVRK 216
Query: 115 DDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAH 174
D L IAR ++ IV+AN++ +P I +GQ L IP + +
Sbjct: 217 GDTLWSIARA---HVVTVPAIVDANDLDDPSSISVGQKLKIPGGTTT-----------TY 262
Query: 175 VVEEGSSFALIAQKF---GTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
V G + IA G+ + LN + D L G+ L +P K
Sbjct: 263 RVTRGDTLWSIAASRLGDGSRWREIATLNRLKDADDLSIGQTLKLPKK 310
>gi|318042464|ref|ZP_07974420.1| LysM domain-containing protein [Synechococcus sp. CB0101]
Length = 448
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 112 VKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH 171
VK + L IA +G + Q++++ NN+ +P + G + +P +
Sbjct: 26 VKPGETLSEIAER-YGTSV--QRLMQLNNLRSPQDLWAGSRIQVP---GAGGTTSRGGGS 79
Query: 172 YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V+ G + + IA+++GT LM+LNG+H L AG + VP
Sbjct: 80 GNYTVKPGETLSEIAERYGTSVQRLMQLNGLHSPQDLWAGSRIQVP 125
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK + L IA +G + Q++++ N + +P + G + +P +
Sbjct: 82 YTVKPGETLSEIAER-YGTSV--QRLMQLNGLHSPQDLWAGSRIQVPGAAGASSGGGTRT 138
Query: 170 --VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIK 226
V + V+ G + + +A+++GT LM++N + L AG + VP+ ++ K
Sbjct: 139 TTVKANYTVKPGETLSELAERYGTSVQRLMEMNNLRSAQDLWAGSRIQVPVTRTAAAPK 197
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL---PCSCDDVDN 166
YTVK + L +A +G + Q+++E NN+ + + G + +P+ + N
Sbjct: 145 YTVKPGETLSELAER-YGTSV--QRLMEMNNLRSAQDLWAGSRIQVPVTRTAAAPKPAVN 201
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGE 212
H V+ G S ++IA ++G L+ +NGI D ++++ G+
Sbjct: 202 KNATQ--HKVQSGESLSVIANRYGVSLQNLIAINGISDPNQVVVGQ 245
>gi|384263648|ref|YP_005419355.1| spore coat and germination protein YaaH [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387896541|ref|YP_006326837.1| spore germination protein [Bacillus amyloliquefaciens Y2]
gi|380497001|emb|CCG48039.1| spore coat and germination protein YaaH [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387170651|gb|AFJ60112.1| spore germination protein [Bacillus amyloliquefaciens Y2]
Length = 426
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I EAN + NP+ + +GQ L IP+ + V++G + A IA +F
Sbjct: 21 IAEANKLPNPNTLVVGQTLVIPIEGQY------------YEVKQGDTLASIAGRFHISAA 68
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
L ++NGI + L G L +P +A I+++++
Sbjct: 69 ELARVNGIQPGTTLRVGTRLYIPQQANKPDIESNAY 104
>gi|410668172|ref|YP_006920543.1| spore cortex-lytic enzyme SleB [Thermacetogenium phaeum DSM 12270]
gi|409105919|gb|AFV12044.1| spore cortex-lytic enzyme SleB [Thermacetogenium phaeum DSM 12270]
Length = 424
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 16/179 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDD---VDN 166
YTVKK D L IAR I+ NN+ L ++GQ LT LP S DD V
Sbjct: 130 YTVKKGDTLYLIARD---HGTSVDAIISLNNLKTTHL-EVGQVLT--LPESGDDGSSVPP 183
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIK 226
+ + V+ G + LIA +GT + +M LN + +++ G+ L +P S+
Sbjct: 184 GSGSTFQYTVKSGDTLYLIAVSYGTTVEEIMSLNNLR-TTEIYPGQVLTIPGNGGGSTPS 242
Query: 227 ADSFDNYLRVANGTYTFTA--NSCVKCQCDATNNWTLQCKPSQ--FQPSSPNSRWKTCP 281
S+ ++ + Y + V+ A ++ + P Q P S + + +T P
Sbjct: 243 GTSYT--VQYGDSLYLIARAYGTTVEALMAANGLYSTEIYPGQTILIPGSRSGQTQTNP 299
>gi|420265119|ref|ZP_14767702.1| phage lysin, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394428818|gb|EJF01313.1| phage lysin, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 203
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA + Y ++ NNI +P +I +G+ L + V +
Sbjct: 106 YTVKSGDTLSKIAASYN---TTYTRLATLNNIKSPYIIYVGEKLKV-----SGSVTTSSK 157
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V+Y V++G + ++I++ +GT ++ LNG+ + + + G+ L V
Sbjct: 158 VYYT--VKKGDTLSVISKNYGTTVASIKTLNGLKNVNYIYVGQSLRVK 203
>gi|295097539|emb|CBK86629.1| LysM domain./Putative phospholipid-binding domain [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 146
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
T D+ YTVK D L I++T++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 87 TDAKDEATYYTVKSGDTLSAISKTVYGDANQYNKIFEANRPMLSSPDKIYPGQTLRIP 144
>gi|404419294|ref|ZP_11001054.1| hypothetical protein MFORT_02839 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403661286|gb|EJZ15811.1| hypothetical protein MFORT_02839 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 1474
Score = 47.4 bits (111), Expect = 0.012, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 93 IHCICSNGTG-VSDKVPV---YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQ 148
+ C S+ TG V PV Y V+ D L IA + KY I +AN+++NP LI
Sbjct: 339 VGCRLSSATGAVPTPTPVADTYVVRAGDTLWDIAEHFYHDPFKYHLIAKANHLTNPHLIG 398
Query: 149 IGQNLTIP 156
IGQ LTIP
Sbjct: 399 IGQRLTIP 406
>gi|419857876|ref|ZP_14380577.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB202]
gi|410497028|gb|EKP88506.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB202]
Length = 359
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI--------PLPCSC 161
YTV D L IA+ +G + I ANNISNPD I +G+ LTI P S
Sbjct: 248 YTVASGDTLTSIAKA-YGTTVS--AIATANNISNPDYIYVGEVLTIGSSTSTSTSTPTSS 304
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ ++ V G + A IA+ +G TL KLN I + + + AG L +
Sbjct: 305 TSSSSTSSSSKSYTVASGDTLASIAKAYGVSISTLAKLNNISNTNLIYAGTTLKI 359
>gi|27469237|ref|NP_765874.1| autolysin (N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis ATCC 12228]
gi|57866082|ref|YP_187697.1| LysM domain-containing protein [Staphylococcus epidermidis RP62A]
gi|251811260|ref|ZP_04825733.1| autolysin (N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis BCM-HMP0060]
gi|282874617|ref|ZP_06283499.1| LysM domain protein [Staphylococcus epidermidis SK135]
gi|293367682|ref|ZP_06614334.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417657482|ref|ZP_12307143.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU028]
gi|417659164|ref|ZP_12308774.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU045]
gi|417909580|ref|ZP_12553316.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU037]
gi|417912542|ref|ZP_12556233.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU105]
gi|417913543|ref|ZP_12557208.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU109]
gi|418607139|ref|ZP_13170389.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU057]
gi|418609096|ref|ZP_13172264.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU065]
gi|418612319|ref|ZP_13175363.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU117]
gi|418622227|ref|ZP_13184982.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU123]
gi|418624187|ref|ZP_13186864.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU125]
gi|418626606|ref|ZP_13189204.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU126]
gi|418628051|ref|ZP_13190610.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU127]
gi|418664908|ref|ZP_13226371.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU081]
gi|419767967|ref|ZP_14294108.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus aureus
subsp. aureus IS-250]
gi|419770534|ref|ZP_14296608.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus aureus
subsp. aureus IS-K]
gi|420163740|ref|ZP_14670482.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM095]
gi|420166164|ref|ZP_14672852.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM088]
gi|420168016|ref|ZP_14674667.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM087]
gi|420170855|ref|ZP_14677411.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM070]
gi|420172993|ref|ZP_14679490.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM067]
gi|420188972|ref|ZP_14694971.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM039]
gi|420195608|ref|ZP_14701398.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM021]
gi|420197500|ref|ZP_14703223.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM020]
gi|420202881|ref|ZP_14708468.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM018]
gi|420207874|ref|ZP_14713360.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM008]
gi|420210526|ref|ZP_14715951.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM003]
gi|420211585|ref|ZP_14716944.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM001]
gi|420222677|ref|ZP_14727592.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH08001]
gi|420224735|ref|ZP_14729574.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH06004]
gi|420227620|ref|ZP_14732384.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH05003]
gi|420230793|ref|ZP_14735472.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH04003]
gi|421608534|ref|ZP_16049750.1| LysM domain-containing protein [Staphylococcus epidermidis AU12-03]
gi|81675443|sp|Q5HRU2.1|SLE1_STAEQ RecName: Full=N-acetylmuramoyl-L-alanine amidase sle1; Flags:
Precursor
gi|81842411|sp|Q8CMN2.1|SLE1_STAES RecName: Full=N-acetylmuramoyl-L-alanine amidase sle1; Flags:
Precursor
gi|27316786|gb|AAO05961.1|AE016751_256 autolysin (N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis ATCC 12228]
gi|57636740|gb|AAW53528.1| LysM domain protein [Staphylococcus epidermidis RP62A]
gi|251805221|gb|EES57878.1| autolysin (N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis BCM-HMP0060]
gi|281296541|gb|EFA89053.1| LysM domain protein [Staphylococcus epidermidis SK135]
gi|291318252|gb|EFE58646.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329734345|gb|EGG70659.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU028]
gi|329736092|gb|EGG72365.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU045]
gi|341650583|gb|EGS74402.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU105]
gi|341652884|gb|EGS76659.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU037]
gi|341655237|gb|EGS78969.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU109]
gi|374405633|gb|EHQ76552.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU057]
gi|374408969|gb|EHQ79774.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU065]
gi|374409837|gb|EHQ80607.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU081]
gi|374819621|gb|EHR83741.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU117]
gi|374827201|gb|EHR91066.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU123]
gi|374827911|gb|EHR91761.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU125]
gi|374831676|gb|EHR95413.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU126]
gi|374838810|gb|EHS02344.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU127]
gi|383361393|gb|EID38766.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus aureus
subsp. aureus IS-250]
gi|383363403|gb|EID40737.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus aureus
subsp. aureus IS-K]
gi|394234029|gb|EJD79618.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM095]
gi|394234219|gb|EJD79804.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM088]
gi|394237410|gb|EJD82900.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM087]
gi|394239462|gb|EJD84903.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM070]
gi|394241259|gb|EJD86677.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM067]
gi|394253784|gb|EJD98779.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM039]
gi|394263107|gb|EJE07851.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM021]
gi|394265601|gb|EJE10252.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM020]
gi|394268900|gb|EJE13447.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM018]
gi|394275107|gb|EJE19499.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM008]
gi|394276138|gb|EJE20488.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM003]
gi|394280920|gb|EJE25191.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM001]
gi|394288631|gb|EJE32535.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH08001]
gi|394294415|gb|EJE38098.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH06004]
gi|394296215|gb|EJE39845.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH04003]
gi|394296471|gb|EJE40096.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH05003]
gi|406655694|gb|EKC82117.1| LysM domain-containing protein [Staphylococcus epidermidis AU12-03]
Length = 324
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRAKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTATY--TVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
>gi|418325158|ref|ZP_12936366.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU071]
gi|365228762|gb|EHM69940.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU071]
Length = 324
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRAKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTATY--TVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
>gi|332298227|ref|YP_004440149.1| peptidase M23 [Treponema brennaborense DSM 12168]
gi|332181330|gb|AEE17018.1| Peptidase M23 [Treponema brennaborense DSM 12168]
Length = 284
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP------LPCSCDD 163
+TV K + L I+RT + ++ ANNI +L++ GQ L IP P
Sbjct: 25 HTVAKGETLYSISRTY---RVSVAELCAANNIKQTELLKAGQKLIIPDEAGATAPSRSAA 81
Query: 164 VD--NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
+ A+ + V++G +F IA+K G D L++LNG+ L G+ + +P+ A
Sbjct: 82 ANPIGAEPAAEPYTVQKGDTFYGIARKNGISVDDLLELNGLSASDTLKVGQIVKIPVPA 140
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 22 LSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
L +A+ F ++ T A+ + L + +++E+ + +K +L A +
Sbjct: 14 LFSARTFGATSHTVAKGETLYSISRTYRVSVAELCAANNIKQTE-LLKAG-------QKL 65
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P + P +N G YTV+K D IAR + ++E N +
Sbjct: 66 IIPDEAGATAPSRSAAANPIGAEPAAEPYTVQKGDTFYGIARK---NGISVDDLLELNGL 122
Query: 142 SNPDLIQIGQNLTIPLPC 159
S D +++GQ + IP+P
Sbjct: 123 SASDTLKVGQIVKIPVPA 140
>gi|422536831|ref|ZP_16612731.1| LysM domain protein [Propionibacterium acnes HL078PA1]
gi|315081092|gb|EFT53068.1| LysM domain protein [Propionibacterium acnes HL078PA1]
Length = 1036
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ +D L IA +G ++++I EA+ I +++GQ L +P+P +N
Sbjct: 164 YTVRANDYLWKIAEHYYGDGAQFRRIAEASGIDPHSELKVGQKLVLPVP------ENTAA 217
Query: 170 VHYAHVVEEGSSFALIAQKF---GTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+H V+ G IA+ + G + + +GI S L G+ L +P
Sbjct: 218 IHS---VKAGEYLWEIAEHYYGDGAQYHKIAEASGIDAHSDLAVGQKLVIP 265
>gi|226493122|ref|NP_001147981.1| protein kinase precursor [Zea mays]
gi|195614968|gb|ACG29314.1| protein kinase [Zea mays]
gi|413926296|gb|AFW66228.1| putative lysM-domain receptor-like protein kinase family protein
[Zea mays]
Length = 680
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 66 SILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVK-KDDGLDFIART 124
++ AN P +P + A + VP+ C C+ G G YT++ + + IA
Sbjct: 93 TVAAANAVPTVSP----LAASSLVLVPVPCACTPG-GYYQHNSSYTIEFQSETYFIIANI 147
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNAKVVHY--AHVVEEGSS 181
+ L Q ++ N + + + G NLT+PL C+C AK Y +++V G
Sbjct: 148 TYQGLTTCQALIAQNPLHDSRGLVAGNNLTVPLRCACPSPAQAAKGFRYLLSYLVMWGDG 207
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
IA +F D ++ N + D + L +PLKA
Sbjct: 208 VPSIAARFRVDPQAVLDANSLTADDIIFPFTTLLIPLKAA 247
>gi|406588369|ref|ZP_11062982.1| hypothetical protein GMD1S_09427 [Streptococcus sp. GMD1S]
gi|419815855|ref|ZP_14340264.1| hypothetical protein GMD2S_09414 [Streptococcus sp. GMD2S]
gi|419819252|ref|ZP_14343007.1| hypothetical protein GMD4S_11196 [Streptococcus sp. GMD4S]
gi|404456036|gb|EKA02812.1| hypothetical protein GMD4S_11196 [Streptococcus sp. GMD4S]
gi|404464831|gb|EKA10346.1| hypothetical protein GMD2S_09414 [Streptococcus sp. GMD2S]
gi|404468382|gb|EKA13372.1| hypothetical protein GMD1S_09427 [Streptococcus sp. GMD1S]
Length = 315
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI----PLPCSCDDVD 165
YTV++ D L I ++G YQ++ N I+NPDLI GQ L + P S
Sbjct: 218 YTVQEGDTLSAIG-ALYGT--SYQELAAINGIANPDLIYPGQVLKVTGNPQAPSSI---- 270
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ VE G + + IA +GT+ L LNGI + + G+ L +
Sbjct: 271 -------TYTVESGDTLSAIAAMYGTNYQHLAALNGIENPDLIYPGQVLRI 314
>gi|420185122|ref|ZP_14691221.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM040]
gi|394255504|gb|EJE00454.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM040]
Length = 324
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRAKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTTTY--TVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
>gi|334125616|ref|ZP_08499605.1| LysM domain protein [Enterobacter hormaechei ATCC 49162]
gi|333387079|gb|EGK58283.1| LysM domain protein [Enterobacter hormaechei ATCC 49162]
Length = 146
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
T D+ YTVK D L I++T++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 87 TDAQDEATYYTVKSGDTLSAISKTVYGDANQYNKIFEANRPMLSSPDKIYPGQTLRIP 144
>gi|427704186|ref|YP_007047408.1| LysM repeat-containing protein [Cyanobium gracile PCC 6307]
gi|427347354|gb|AFY30067.1| LysM repeat-containing protein [Cyanobium gracile PCC 6307]
Length = 359
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 111 TVKKDDGL-DFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
TVK + L D AR + +++ N IS+PDL++ G+ LT+P + +
Sbjct: 24 TVKPGETLSDIAAR----HRVSVTTLMKMNGISDPDLVEAGRTLTLPGGAARPRASGGSL 79
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V G + + IA++ G LM+LNG+ + AG+ L VP
Sbjct: 80 -----TVAPGETLSEIAERHGITVSRLMQLNGLSKADHIEAGQKLVVP 122
>gi|419959886|ref|ZP_14475934.1| LysM domain/BON superfamily protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388605166|gb|EIM34388.1| LysM domain/BON superfamily protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 146
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
T D+ YTVK D L I++T++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 87 TDAKDEATYYTVKSGDTLSAISKTVYGDANQYNKIFEANRPMLSSPDKIYPGQTLRIP 144
>gi|296104679|ref|YP_003614825.1| hypothetical protein ECL_04347 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059138|gb|ADF63876.1| hypothetical protein ECL_04347 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 146
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
T D+ YTVK D L I++T++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 87 TDAKDEATYYTVKSGDTLSAISKTVYGDANQYNKIFEANRPMLSSPDKIYPGQTLRIP 144
>gi|383505724|gb|AFH37456.1| LysM domain protein [Propionibacterium acnes]
Length = 1037
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ +D L IA +G ++++I EA+ I +++GQ L +P+P + V + K
Sbjct: 164 YTVRANDYLWKIAEHYYGDGAQFRRIAEASGIDPHSELKVGQKLILPVPKNTAAVHSVKA 223
Query: 170 VHY-----AHVVEEGSSFALIAQKFGTD 192
Y H +G+ + IA+ G D
Sbjct: 224 GEYLWEIAEHYYGDGAQYHKIAEASGID 251
>gi|94986500|ref|YP_594433.1| membrane-bound lytic murein transglycosylase D (MltD) [Lawsonia
intracellularis PHE/MN1-00]
gi|442555314|ref|YP_007365139.1| lytic transglycosylase [Lawsonia intracellularis N343]
gi|94730749|emb|CAJ54111.1| membrane-bound lytic murein transglycosylase D (MltD) [Lawsonia
intracellularis PHE/MN1-00]
gi|441492761|gb|AGC49455.1| lytic transglycosylase [Lawsonia intracellularis N343]
Length = 555
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL----PCSC 161
KV +TVKK D L IA+ +G + +V ANN+S+ D I +GQ L IP+ P +
Sbjct: 439 KVQFHTVKKGDTLFSIAK-YYG--ITQDCLVTANNLSHTD-ISVGQQLYIPIEKISPMAM 494
Query: 162 -----DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V ++V Y V++G S IA+KF L+ LN + SKL G+ + V
Sbjct: 495 LKKDPEQVQPKRIVQYQ--VQQGDSLWSIARKFNVPPIDLLSLNNLSRQSKLRPGDYVQV 552
Query: 217 PL 218
+
Sbjct: 553 AI 554
>gi|347756707|ref|YP_004864270.1| flagellum-specific muramidase [Candidatus Chloracidobacterium
thermophilum B]
gi|347589224|gb|AEP13753.1| Muramidase (flagellum-specific) [Candidatus Chloracidobacterium
thermophilum B]
Length = 611
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA+ ++V NNI NP+LI GQ L +P
Sbjct: 328 YTVRPGDTLSQIAQR---HGTTVDELVRLNNIRNPNLIYPGQELRLPART---------- 374
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
+ V G + + IAQ+ GT D L++LN I + + + G+ L
Sbjct: 375 ----YTVRPGDTLSQIAQRHGTTVDELVRLNNIRNPNLIYPGQEL 415
>gi|295695771|ref|YP_003589009.1| peptidoglycan-binding lysin domain-containing protein [Kyrpidia
tusciae DSM 2912]
gi|295411373|gb|ADG05865.1| Peptidoglycan-binding lysin domain protein [Kyrpidia tusciae DSM
2912]
Length = 169
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 22/129 (17%)
Query: 92 PIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQ 151
PI+ C G YT++ D L IA+ L ++EAN +P +++GQ
Sbjct: 60 PIYPACPEGN-------YYTIRPGDTLAAIAQFFNVSL---ADLIEANPGIDPYHLRVGQ 109
Query: 152 NLTIPL---PCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKL 208
+ IPL P +C + ++V+ G +F IAQ+F D LM++N L
Sbjct: 110 IICIPLAVPPVTCP---------HRYIVQPGDTFYSIAQRFNISVDALMRMNPHVRPEAL 160
Query: 209 IAGEPLDVP 217
+ G+ + +P
Sbjct: 161 LIGQTICLP 169
>gi|456013915|gb|EMF47552.1| N-acetylmuramoyl-L-alanine amidase [Planococcus halocryophilus Or1]
Length = 398
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPLPCSCDDVD 165
YTVK D L IAR KY V +ANNI+N +LI +GQ LTIP +
Sbjct: 242 YTVKAGDTLYGIAR-------KYNVTVSALAKANNITNYNLIYVGQVLTIPGKTTTPPAI 294
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
K + V+ G + IA+K+ L K N I + + + G+ L +P K
Sbjct: 295 AVK-----YTVKAGDTLYSIARKYNVTISELAKANNITNYNLIHVGQVLTIPGK 343
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKY----QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
YTVK D L IAR KY ++ +ANNI+N +LI +GQ LTIP +
Sbjct: 298 YTVKAGDTLYSIAR-------KYNVTISELAKANNITNYNLIHVGQVLTIPGKTTTPP-- 348
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
A V+Y V+ G + IA K+ T + N I + + + G+ L +P
Sbjct: 349 -ASSVNY--TVKAGDTLYSIASKYNTTVAKIAAANNISNVNAIAVGQVLVIP 397
>gi|261342458|ref|ZP_05970316.1| LysM domain protein [Enterobacter cancerogenus ATCC 35316]
gi|288315096|gb|EFC54034.1| LysM domain protein [Enterobacter cancerogenus ATCC 35316]
Length = 146
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
T D+ YTVK D L I++T++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 87 TDAKDEATYYTVKSGDTLSAISKTVYGDANQYNKIFEANRPMLSSPDKIYPGQTLRIP 144
>gi|153816048|ref|ZP_01968716.1| hypothetical protein RUMTOR_02294 [Ruminococcus torques ATCC 27756]
gi|145846695|gb|EDK23613.1| glycosyl hydrolase family 25 [Ruminococcus torques ATCC 27756]
Length = 356
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YT++ D L IA FG + + N IS+P+LI G L IP N+
Sbjct: 259 YTIQPGDTLSEIAER-FGTTVS--SLSALNGISDPNLIYAGNTLRIP------QGGNSAS 309
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
V+Y ++ G + + IA++FGT +L LNGI D + + AG L
Sbjct: 310 VYY--TIQPGDTLSEIAERFGTTVASLSALNGISDPNLIYAGNTL 352
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI 225
+ ++ G + + IA++FGT +L LNGI D + + AG L +P ++S+
Sbjct: 259 YTIQPGDTLSEIAERFGTTVSSLSALNGISDPNLIYAGNTLRIPQGGNSASV 310
>gi|225430257|ref|XP_002282620.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At1g51810-like [Vitis vinifera]
Length = 593
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 33/218 (15%)
Query: 2 GNFQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTV 61
G ++ + ++FT+ A + C+ A C A + Y+P + T++ SLF V
Sbjct: 7 GIKKILVAFMIFTLLACIGHCFHVSSLPCNVSLAQSCPASLYYVPNSPKTLAAAASLFHV 66
Query: 62 KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI 121
+ N + V ++C C G YTV+ D + I
Sbjct: 67 DS----------------NLVRQTVEGYLVNVNCSCPAGHTAFTWHMDYTVQPGDTWERI 110
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQI-GQNLTIPLPCSCDDVDNAKVVHYAHVVEEGS 180
+ + FG + + D + I QN+T+ L C C DN +V Y V+ G
Sbjct: 111 SSS-FGSFV----------VKKTDKMLISSQNVTLDLLCGCSK-DNKVIVTYR--VKHGD 156
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIA-GEPLDVP 217
+ I +F D + ++LNGI D+S LI G+ + +P
Sbjct: 157 TLYTICSRFSADLNQTVQLNGI-DNSGLIHDGDVIFIP 193
>gi|401765226|ref|YP_006580233.1| LysM domain/BON superfamily protein [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400176760|gb|AFP71609.1| LysM domain/BON superfamily protein [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 146
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
T D+ YTVK D L I++T++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 87 TDAKDEATYYTVKSGDTLSAISKTVYGDANQYNKIFEANRPMLSSPDKIYPGQTLRIP 144
>gi|229015055|ref|ZP_04172120.1| Cell wall hydrolase [Bacillus mycoides DSM 2048]
gi|228746251|gb|EEL96189.1| Cell wall hydrolase [Bacillus mycoides DSM 2048]
Length = 265
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
P+ + I SN G + YTV+K+D L+ I++ +G + Q I +AN+ +N D I
Sbjct: 11 PLSAAMITIVSNPVGAAASTD-YTVQKNDTLEAISKQ-YG--VSVQLIKQANSKAN-DQI 65
Query: 148 QIGQNLTIPLPCSCDD-------VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
IG+N+TIP + ++ D+ + V+ G + + I+Q++ ++ + N
Sbjct: 66 NIGENVTIPSSSTTNEYVQKNNSTDSTNTYQAIYQVKSGDTLSSISQQYKVSIQSIKQTN 125
Query: 201 GIHDDSKLIAGEPLDV 216
+ D S++ G+ L +
Sbjct: 126 NV-DGSQIFVGQHLKI 140
>gi|357039179|ref|ZP_09100974.1| Peptidase M23 [Desulfotomaculum gibsoniae DSM 7213]
gi|355358643|gb|EHG06409.1| Peptidase M23 [Desulfotomaculum gibsoniae DSM 7213]
Length = 301
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY V+K D L IA +G L ++ E NN+ + + I GQ L +P
Sbjct: 67 VYVVQKGDTLSHIALQ-YG--LDADQLAETNNLRDGNHIIKGQVLMLP----------GT 113
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V+ Y V +G + +LIA +FG LM++N + D L+AG+ + +P
Sbjct: 114 VIPYR--VSKGETLSLIALRFGCSEKKLMEMNELRDPDCLLAGQQIMIP 160
>gi|417646358|ref|ZP_12296218.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU144]
gi|329727992|gb|EGG64439.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU144]
Length = 324
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRAKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTATY--TVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
>gi|419858446|ref|ZP_14381119.1| LysM repeat-containing muramidase [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|410498882|gb|EKP90327.1| LysM repeat-containing muramidase [Oenococcus oeni DSM 20252 =
AWRIB129]
Length = 487
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L IA+ +G + I ANNISNPD I +G+ LTI S ++
Sbjct: 378 YTVASGDTLTSIAKA-YGTTVS--AIATANNISNPDYIYVGEVLTIGSSTSTSTSTSSTS 434
Query: 170 VHY------AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
++ V G + IA+ +G TL KLN I + + + AG L +
Sbjct: 435 SSSTSSSSKSYTVASGDTLTSIAKAYGVSISTLAKLNNISNTNLIYAGTTLKI 487
>gi|42522673|ref|NP_968053.1| membrane-bound lytic murein transglycosylase D precursor
[Bdellovibrio bacteriovorus HD100]
gi|39573869|emb|CAE79046.1| membrane-bound lytic murein transglycosylase D precursor
[Bdellovibrio bacteriovorus HD100]
Length = 526
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 28/220 (12%)
Query: 20 STLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLF--TVKNLRSILGANNFPPGT 77
S ++ A+ F Q A Y + T+S + + TV LR + N+ P
Sbjct: 308 SKVAAAESFVSRVQFVADTGDTQTYRIRHGDTLSTVARRYRTTVAFLRDL---NDLPRRK 364
Query: 78 PRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV-------------YTVKKDDGLDFIART 124
P + Q P + P+ + V+ K Y V+ D L IAR
Sbjct: 365 PLKVGMRIQVPDRTPLKDRSQTRSMVAKKSDAPKNTVTISSDGRYYIVQSGDSLFTIARK 424
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-------KVVHYAHVVE 177
+ + Q++ NNI +++G L +P P S + A K HVV
Sbjct: 425 YATSVSELQRM---NNIKRGRTLKVGMKLKVPTPGSSSAREVATEVAQSKKAKSKVHVVR 481
Query: 178 EGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
G + ++IA K+ + + N I + + L+ G + +P
Sbjct: 482 RGENLSVIAAKYNVAVSDIKERNKIRNPASLVVGARIVIP 521
>gi|52079879|ref|YP_078670.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|404488762|ref|YP_006712868.1| phage glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683891|ref|ZP_17658730.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52003090|gb|AAU23032.1| Glycoside Hydrolase Family 25 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52347753|gb|AAU40387.1| phage putative glycoside hydrolase [Bacillus phage BLi_Pp3]
gi|383440665|gb|EID48440.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 317
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 103 VSDKVPV-----YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
VS+K PV YTVKK D L IA+ + Q + NNI + + I +GQ L I
Sbjct: 206 VSNKKPVKTETVYTVKKGDTLSEIAQKNNTTVKALQNL---NNIKDANKIYVGQKLKIS- 261
Query: 158 PCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
S N K Y + ++ G + + I+++F T TL NGI + +K+ AG+ + V
Sbjct: 262 -GSPSTASNKK--QY-YTIKSGDTLSGISKRFNTSIKTLQAWNGIKNANKIYAGQKIRV 316
>gi|406665825|ref|ZP_11073596.1| Putative sporulation-specific glycosylase ydhD [Bacillus isronensis
B3W22]
gi|405386344|gb|EKB45772.1| Putative sporulation-specific glycosylase ydhD [Bacillus isronensis
B3W22]
Length = 418
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 12/85 (14%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
Q +VEAN I P + +GQ L +PL ++V+ G S I Q+F +
Sbjct: 13 QSLVEANQIPEPARLVVGQALVVPLKGQY------------YIVQPGDSLWSIGQRFQVN 60
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVP 217
TL + NG++ D+ L+ G L +P
Sbjct: 61 YLTLAQANGLNPDALLMIGTSLYIP 85
>gi|421193236|ref|ZP_15650486.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB553]
gi|399972915|gb|EJO07108.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB553]
Length = 483
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L IA+ +G + I ANNISNPD I +G+ LTI S ++
Sbjct: 374 YTVASGDTLTSIAKA-YGTTVS--AIATANNISNPDYIYVGEVLTIGSSTSTSTSTSSTS 430
Query: 170 VHY------AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
++ V G + IA+ +G TL KLN I + + + AG L +
Sbjct: 431 SSSTSSSSKSYTVASGDTLTSIAKSYGVSISTLAKLNNISNTNLIYAGTTLKI 483
>gi|393200059|ref|YP_006461901.1| glycosyl hydrolase [Solibacillus silvestris StLB046]
gi|327439390|dbj|BAK15755.1| predicted glycosyl hydrolase [Solibacillus silvestris StLB046]
Length = 418
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 12/85 (14%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
Q +VEAN I P + +GQ L +PL ++V+ G S I Q+F +
Sbjct: 13 QSLVEANQIPEPARLVVGQALVVPLKGQY------------YIVQPGDSLWSIGQRFQVN 60
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVP 217
TL + NG++ D+ L+ G L +P
Sbjct: 61 YLTLAQANGLNPDALLMIGTSLYIP 85
>gi|116491213|ref|YP_810757.1| LysM repeat-containing muramidase [Oenococcus oeni PSU-1]
gi|116091938|gb|ABJ57092.1| Muramidase with LysM repeats [Oenococcus oeni PSU-1]
Length = 390
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L IA+ +G + I ANNISNPD I +G+ LTI S ++
Sbjct: 281 YTVASGDTLTSIAKA-YGTTV--SAIATANNISNPDYIYVGEVLTIGSSTSTSTSTSSTS 337
Query: 170 VHY------AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
++ V G + IA+ +G TL KLN I + + + AG L +
Sbjct: 338 SSSTSSSSKSYTVASGDTLTSIAKAYGVSISTLAKLNNISNTNLIYAGTTLKI 390
>gi|296111097|ref|YP_003621478.1| hypothetical protein LKI_04840 [Leuconostoc kimchii IMSNU 11154]
gi|339491685|ref|YP_004706190.1| hypothetical protein LGMK_07585 [Leuconostoc sp. C2]
gi|295832628|gb|ADG40509.1| hypothetical protein LKI_04840 [Leuconostoc kimchii IMSNU 11154]
gi|338853357|gb|AEJ31567.1| hypothetical protein LGMK_07585 [Leuconostoc sp. C2]
Length = 390
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
+++ +AN+IS+ +LI GQ LT+ P + + + V+ G + + +AQ+ G D
Sbjct: 51 EELAKANHISDKNLIIAGQKLTVSAPTATSISADGTT----YTVQAGDTLSKVAQQTGID 106
Query: 193 RDTLMKLNGIHDDSKLIAGEPL 214
TL+ LN + D+ ++AG+ L
Sbjct: 107 VTTLVSLNNLSSDNFVLAGQEL 128
>gi|418412896|ref|ZP_12986146.1| N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus epidermidis
BVS058A4]
gi|410883756|gb|EKS31591.1| N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus epidermidis
BVS058A4]
Length = 324
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI---PLPCSCDDVD 165
VYTVK D L IA +G YQKI++ N ++N LI GQ L + S
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVFGKATSSSRAKAS 140
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ + V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTATYTVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
>gi|378823508|ref|ZP_09846133.1| LysM domain protein [Sutterella parvirubra YIT 11816]
gi|378597686|gb|EHY30949.1| LysM domain protein [Sutterella parvirubra YIT 11816]
Length = 674
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS-CDDV 164
K +Y V++ D L IA +G + K+ AN + + I+IGQ L IP +
Sbjct: 571 KSEIYVVRQGDTLSEIA-DRYG--VGLSKLRAANGLRG-NAIRIGQRLVIPATAKRLQEA 626
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+AK HVV G + + IA+++GT + + NG+ S L GE L +P
Sbjct: 627 ASAKT----HVVRSGDTLSAIARRYGTSVSAIQRANGM-TGSSLRVGERLKLP 674
>gi|242060824|ref|XP_002451701.1| hypothetical protein SORBIDRAFT_04g006280 [Sorghum bicolor]
gi|241931532|gb|EES04677.1| hypothetical protein SORBIDRAFT_04g006280 [Sorghum bicolor]
Length = 679
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 9/156 (5%)
Query: 70 ANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFI-ARTIFGQ 128
AN P +P + A + VP+ C C+ G G YT++ FI A +
Sbjct: 93 ANAVPTVSP----LAASSLVLVPVPCACTPG-GYYQHNSSYTIQFLGETYFIIANITYQG 147
Query: 129 LLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNAKVVHY--AHVVEEGSSFALI 185
L Q +++ N + + + G NLT+PL C+C A Y +++V G I
Sbjct: 148 LTTCQALIDQNPLHDSRGLVAGNNLTVPLRCACPSPAQAASGFRYLLSYLVMWGDGVTSI 207
Query: 186 AQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
A +F D ++ NG+ D + L +PLKA
Sbjct: 208 AARFRADPQDVLDANGLTADDIIFPFTTLLIPLKAA 243
>gi|443245425|ref|YP_007378650.1| putative peptidoglycan-binding protein, LysM family [Nonlabens
dokdonensis DSW-6]
gi|442802824|gb|AGC78629.1| putative peptidoglycan-binding protein, LysM family [Nonlabens
dokdonensis DSW-6]
Length = 125
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLTIP 156
+TVK + L IA+ F +KY++I EAN + NPDLI GQ LTIP
Sbjct: 75 HTVKSGESLSLIAKHYFKDPMKYKQIFEANTDQLKNPDLIHPGQELTIP 123
>gi|168016701|ref|XP_001760887.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687896|gb|EDQ74276.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 7/184 (3%)
Query: 38 CQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCIC 97
C+ Y ++ I +LF I A++ P N + P+ +P+ C C
Sbjct: 144 CETYALYRTQGSQSLQSIATLFNTTAAE-IANASDINPANSTNL-LSDLTPLYIPLSCGC 201
Query: 98 SNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
+ G + V V+ + + I+ + L + I AN P +Q GQ L IPL
Sbjct: 202 AGGIYQAPTSNV--VEAGETMYIISNKTYQGLTTDEAIAAANPTVVPTEMQPGQVLKIPL 259
Query: 158 PCSCDDV---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
C+C N + + + +I +FG L N + D + L+A L
Sbjct: 260 RCACPSTAQRGNNSTLLLTYAIFPDEILDVIGSRFGLTASELQFANNVTDPTSLLAFTTL 319
Query: 215 DVPL 218
+PL
Sbjct: 320 LIPL 323
>gi|418605189|ref|ZP_13168518.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU041]
gi|418618454|ref|ZP_13181325.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU120]
gi|420182152|ref|ZP_14688293.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM049]
gi|420214812|ref|ZP_14720087.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH05005]
gi|420217951|ref|ZP_14723076.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH05001]
gi|420220719|ref|ZP_14725677.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH04008]
gi|374402887|gb|EHQ73902.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU041]
gi|374815952|gb|EHR80173.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
VCU120]
gi|394250482|gb|EJD95667.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIHLM049]
gi|394282940|gb|EJE27120.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH05005]
gi|394285758|gb|EJE29828.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH04008]
gi|394286190|gb|EJE30216.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH05001]
Length = 324
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRAKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTAIY--TVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
>gi|297567176|ref|YP_003686148.1| peptidoglycan-binding lysin domain-containing protein [Meiothermus
silvanus DSM 9946]
gi|296851625|gb|ADH64640.1| Peptidoglycan-binding lysin domain protein [Meiothermus silvanus
DSM 9946]
Length = 233
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLK--YQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA +G + Y KI +ANNI +PDLI++GQ L IP
Sbjct: 184 YTVQPGDTLSQIALKFYGDGSRESYMKIAKANNIQDPDLIRVGQKLQIP 232
>gi|420233242|ref|ZP_14737859.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH051668]
gi|394300450|gb|EJE43954.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus epidermidis
NIH051668]
Length = 324
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRAKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTAIY--TVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
>gi|407648686|ref|YP_006812445.1| hypothetical protein O3I_037620 [Nocardia brasiliensis ATCC 700358]
gi|407311570|gb|AFU05471.1| hypothetical protein O3I_037620 [Nocardia brasiliensis ATCC 700358]
Length = 189
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA +G +YQ+I A+ I NPDLI GQ LTIP
Sbjct: 143 YTVEPGDTLWAIAERFYGDGNRYQEIANASGIDNPDLINPGQVLTIP 189
>gi|326391085|ref|ZP_08212632.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus JW
200]
gi|325992870|gb|EGD51315.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus JW
200]
Length = 199
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTV+ D + IA +FG + ++ AN IS+P+LI GQ + IP C + K
Sbjct: 35 YTVQPGDTMWSIAN-MFG--ISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETCK 91
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG-IHDDSKLIAGEPLDVPL-------KA 220
+ + V+ G S IA FG D L++ N I D + + G+ + +P +A
Sbjct: 92 TI---YTVKPGDSMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPEA 148
Query: 221 CNSSIKADSFDNYLRVAN 238
C + D+ +AN
Sbjct: 149 CKTIYTVKPGDSMWSIAN 166
>gi|293376882|ref|ZP_06623100.1| glycosyl hydrolase family 25 [Turicibacter sanguinis PC909]
gi|292644492|gb|EFF62584.1| glycosyl hydrolase family 25 [Turicibacter sanguinis PC909]
Length = 343
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK D L IA +G + ++V+ N+ISNP++I +G+ L +P S V
Sbjct: 246 YVVKAGDTLWAIANK-YGTTVS--ELVKLNDISNPNVIYVGEVLQMPGESSG-------V 295
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
+ V+ G + IA K+GT L+KLNGI + + + G+ L
Sbjct: 296 ETTEYTVKAGDTLWGIAAKYGTTVSELVKLNGITNPNMIYVGKAL 340
>gi|224133708|ref|XP_002321641.1| predicted protein [Populus trichocarpa]
gi|222868637|gb|EEF05768.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 80 NFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN 139
N+S+P + I +PI C C G S + +Y + K D +A IF L+K Q ++E N
Sbjct: 7 NWSLPLGQDIIIPITCHCLGG--FSKFIFMYNMSKQDSFASVACKIFAGLVKVQSLIEEN 64
Query: 140 NISNPDLIQIGQNLTIPLPCSC 161
+ + +G + +P+ C+C
Sbjct: 65 ADFDGHDVPVGSLINVPIRCAC 86
>gi|390934164|ref|YP_006391669.1| Peptidoglycan-binding lysin domain-containing protein
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389569665|gb|AFK86070.1| Peptidoglycan-binding lysin domain-containing protein
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 295
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK D L IA+ + + I+ NNI NP LI GQ L IP V
Sbjct: 8 YVVKSGDTLFSIAKKFNTSV---EAIISRNNIVNPSLIYPGQTLIIP------------V 52
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V G + LI QKFG ++++ +N I + G+ L +P
Sbjct: 53 TGVYYTVMPGDTIYLIGQKFGVPYESIIYVNNILYPYTIYPGQMLFIP 100
>gi|260435396|ref|ZP_05789366.1| peptidoglycan-binding LysM [Synechococcus sp. WH 8109]
gi|260413270|gb|EEX06566.1| peptidoglycan-binding LysM [Synechococcus sp. WH 8109]
Length = 327
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
++ N I NPDL+Q G+ L +P P H V G + ++IA+++
Sbjct: 46 LMRMNEIRNPDLVQAGRRLQVPGPTVTAGSGR-------HRVNSGETLSIIARRYQVRSR 98
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKAC 221
LM LN + + + + G+ L +P A
Sbjct: 99 DLMALNNLRNANHVEIGQTLRLPSNAV 125
>gi|379732184|ref|YP_005324380.1| peptidoglycan-binding lysin domain protein [Saprospira grandis str.
Lewin]
gi|378577795|gb|AFC26796.1| peptidoglycan-binding lysin domain protein [Saprospira grandis str.
Lewin]
Length = 181
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
V VYTVK D +AR +GQ +Y++++EAN ++ ++++GQ LTIP
Sbjct: 130 VYVYTVKAGDSPIRLARFFYGQDEEYKRLLEANELALDAMLKVGQKLTIP 179
>gi|168063256|ref|XP_001783589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664918|gb|EDQ51621.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 637
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
S+ + + VP+ C C N S +T+ K D ++ T +G L +YQ ++ +N
Sbjct: 66 SLKQTQALYVPLDCRCLNAR--SQMQVSHTIVKGDTFWLLSVTEYGGLTRYQAMMASNPS 123
Query: 142 SNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMK 198
+ + IG +T+P+ C+C V N V + +I+ +FG L +
Sbjct: 124 KDVYNLTIGDTITVPIFCACPTAAQVANGTNYLVTTTVYPSETLDIISARFGISTTDLSR 183
Query: 199 LNGIHDDSKLIAGEPLDVPL 218
N ++ S L L VPL
Sbjct: 184 ANNVNSSSILDVNTTLLVPL 203
>gi|160931317|ref|ZP_02078717.1| hypothetical protein CLOLEP_00154 [Clostridium leptum DSM 753]
gi|156869701|gb|EDO63073.1| LysM domain protein [Clostridium leptum DSM 753]
Length = 1036
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ +D L IA +G ++++I EA+ I +++GQ L +P+P + + + K
Sbjct: 164 YTVRANDYLWKIAEHYYGDGAQFRRIAEASGIDPHSELKVGQKLILPVPKNTAAIHSVKA 223
Query: 170 VHY-----AHVVEEGSSFALIAQKFGTD 192
Y H +G+ + IA+ G D
Sbjct: 224 GEYLWKIAEHYYGDGAQYHKIAEASGID 251
>gi|449460652|ref|XP_004148059.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At1g67720-like [Cucumis sativus]
gi|449528128|ref|XP_004171058.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At1g67720-like [Cucumis sativus]
Length = 604
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLR 65
+VL F++C S++ + C ++ C+ V + P+ + + LF V+
Sbjct: 13 VVLFFFSLCYLNSSVVGST---CDLKSV--CKTYVTFFAKSPDFLDLESVSDLFGVRP-S 66
Query: 66 SILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTI 125
I A+N R P + + +P++C C NG V Y +K+ D +A T
Sbjct: 67 LIADASNLNAEDGRRDLFPGEL-LLIPVNCTC-NGNQYFANV-TYQIKEGDVYYTLAMTS 123
Query: 126 FGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSF 182
F L ++ + +N +P+L+ G +T PL C C D++ ++ + +
Sbjct: 124 FQNLTEWHVVNASNPNLDPNLLHKGDEVTFPLYCKCPSKTDIEKHTNYFITYIWQPTDNI 183
Query: 183 ALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++++ +F D+++ N + + K A P+ +PL
Sbjct: 184 SVVSNEFNVSSDSVLAENN-YTNMKDAANLPVFIPL 218
>gi|356550539|ref|XP_003543643.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
kinase CES101-like [Glycine max]
Length = 463
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 288 SESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLNSLSTCPS---PSNNASRIGSWNLLL 344
S ++ IG+TT S++ N C YAGY +I TTL ++ P + SR +W +++
Sbjct: 8 SSNMYIGDTTYSSSHNLAICAYAGYGTQTIFTTLTAVYIPPGLVHAHHTKSRWWAWLIVI 67
Query: 345 ISIFLVLLHFHL 356
+F+VL+ +L
Sbjct: 68 AGVFVVLIFGYL 79
>gi|433654167|ref|YP_007297875.1| putative glycosyl hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292356|gb|AGB18178.1| putative glycosyl hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 303
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 33/174 (18%)
Query: 53 SEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTV 112
SEI ++ + I + PP +VP Q H C Y V
Sbjct: 110 SEIHQMYYTPPMTPIGEMYDMPP------TVPTQ-------HMPCPT---------YYVV 147
Query: 113 KKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL-------TIPLPCSCDDVD 165
+ D L I+ FG + +I+ AN +P++I GQ + T+P+P S +
Sbjct: 148 QPGDTLWSISNR-FG--ISLDEIIRANYFMDPNMIYPGQTIIIPCPSKTVPMPPSPPVYE 204
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN-GIHDDSKLIAGEPLDVPL 218
+ K +VV+ G + IA +F T D ++K N I + S + G+ + +P+
Sbjct: 205 HPKEGRMVYVVKPGDTLYTIAMRFNTTVDAILKANPDIQNPSLIYPGQRIIIPV 258
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK D L IA+ + + I+ NNI NP LI GQ L IP V
Sbjct: 8 YVVKSGDTLFSIAKKFNTSV---ESIISRNNIVNPSLIYPGQTLIIP------------V 52
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
+ V G + +I QKFG ++++ +N I + G+ L +P N ++++S
Sbjct: 53 TGVYYTVMPGDTVYIIGQKFGIPYESIIYVNNILYPYTIYPGQMLFIP--GANKLMQSES 110
>gi|160878650|ref|YP_001557618.1| alginate lyase 2 [Clostridium phytofermentans ISDg]
gi|160427316|gb|ABX40879.1| Alginate lyase 2 [Clostridium phytofermentans ISDg]
Length = 1556
Score = 46.2 bits (108), Expect = 0.024, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
+Y +K D + IA + I++ NNI N ++ G+ +P
Sbjct: 38 MYQIKDGDTIKKIADRYNTSI---DSIMKLNNIKNSNVFYSGKETKVP------------ 82
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ +VV++G + + IA+ GT DT+ KLNGI D++K+ G+ L V
Sbjct: 83 IASVTYVVKKGDTLSKIARTHGTTVDTIAKLNGIKDENKIQTGQKLIV 130
>gi|148653381|ref|YP_001280474.1| lytic transglycosylase subunit [Psychrobacter sp. PRwf-1]
gi|148572465|gb|ABQ94524.1| Lytic transglycosylase, catalytic [Psychrobacter sp. PRwf-1]
Length = 1079
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L +A L ++ AN +S+ ++IGQ +TIP +
Sbjct: 985 YTVKSGDSLIGLANQ---NGLSVSQLASANGLSSTAQLRIGQKITIPATTTT-------- 1033
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+ V+ G S +A+K+G + +LNGI + L G+ L VP++
Sbjct: 1034 ----YKVKSGDSLIGLAKKYGMTPEKFAELNGISSTAMLQLGQTLKVPVQ 1079
>gi|410667168|ref|YP_006919539.1| peptidoglycan-binding LysM [Thermacetogenium phaeum DSM 12270]
gi|409104915|gb|AFV11040.1| peptidoglycan-binding LysM [Thermacetogenium phaeum DSM 12270]
Length = 169
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
+YT++ D +A+ FG + I+ AN +P+ +QIGQ + IP P +
Sbjct: 10 LYTIRAGDTFFLLAQR-FG--VSLDAILAANPGVDPNNLQIGQVVCIPAPAP----PKPE 62
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
+ + ++ G + + +A++FGT +++ +N D LI G+ + +P + C
Sbjct: 63 CPGFFYTIQPGDTLSELAKRFGTTVKSIIDVNPGIDPRNLIVGQKICIPERRC 115
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP-LPCSCDDVDNAK 168
YT++ D L +A+ FG +K I++ N +P + +GQ + IP C V
Sbjct: 68 YTIQPGDTLSELAKR-FGTTVK--SIIDVNPGIDPRNLIVGQKICIPERRCPRGTV---- 120
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+ +++G + IA+KF T ++K N D LI GE + VP +
Sbjct: 121 ----PYTIKQGDTLEAIARKFHTSVQRILKENPSLDPKNLIVGERICVPAR 167
>gi|359774048|ref|ZP_09277430.1| putative mannose-binding protein [Gordonia effusa NBRC 100432]
gi|359308883|dbj|GAB20208.1| putative mannose-binding protein [Gordonia effusa NBRC 100432]
Length = 215
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA +G +Y+ I AN I++PD+I GQ L IP
Sbjct: 5 YTVQPGDTLWKIAGMHYGDARRYRAISAANKIADPDVIAAGQVLEIP------------D 52
Query: 170 VHYAHVVEEGSSFALIAQKFGTD 192
V Y + V+ G + A +AQ+F D
Sbjct: 53 VTYRYQVKPGDAKAELAQRFYND 75
>gi|374340525|ref|YP_005097261.1| metalloendopeptidase-like membrane protein [Marinitoga piezophila
KA3]
gi|372102059|gb|AEX85963.1| metalloendopeptidase-like membrane protein [Marinitoga piezophila
KA3]
Length = 274
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 15/78 (19%)
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
+ + P QK IK+P + V +YTVK D L +IA+++F L +++
Sbjct: 57 KKYIYPGQK-IKIP-----------EEPVFIYTVKSGDNLSYIAKSMFTDL---NLLIKY 101
Query: 139 NNISNPDLIQIGQNLTIP 156
N+I+NP+ I +GQ L IP
Sbjct: 102 NHITNPEKIYVGQKLLIP 119
>gi|255035773|ref|YP_003086394.1| peptidoglycan-binding LysM [Dyadobacter fermentans DSM 18053]
gi|254948529|gb|ACT93229.1| Peptidoglycan-binding LysM [Dyadobacter fermentans DSM 18053]
Length = 154
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+TV K D L IA+T++G ++KY I EAN + +PDLI GQ L IP
Sbjct: 103 HTVVKGDTLSKIAQTVYGDMMKYPIIFEANKPMLKDPDLIYPGQVLRIP 151
>gi|317968878|ref|ZP_07970268.1| peptidoglycan-binding LysM [Synechococcus sp. CB0205]
Length = 370
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 89 IKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQ 148
IKVP + G+G YTVK + L IA +G + ++V+ N + + + +
Sbjct: 64 IKVPGNVYSGGGSGN------YTVKAGETLSEIA-DRYGTSV--NRLVQLNGLRDANDLW 114
Query: 149 IGQNLTIPLPCSCDDV---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDD 205
G + +P + V NAK H V+ G S + IA ++G L+ +NGI +
Sbjct: 115 AGSRIQVPGASARPQVAVNKNAKT----HRVQPGESLSSIADRYGVSMQRLIAINGISNP 170
Query: 206 SKLIAGEPL 214
++++AG L
Sbjct: 171 NQVMAGSTL 179
>gi|425450745|ref|ZP_18830568.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389768310|emb|CCI06566.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 271
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YT+K D L IA +G K+ I EAN+I+NP+ I +GQ L IP +D + K
Sbjct: 4 YTIKSGDTLRGIALKFYGDASKFVVIQEANDIANPNQISVGQVLEIPELADDNDNNPLKD 63
Query: 170 VHYA 173
H A
Sbjct: 64 FHRA 67
>gi|291460113|ref|ZP_06599503.1| putative LysM domain protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417454|gb|EFE91173.1| putative LysM domain protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 229
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTV+K D L IA+ ++G +Y KI EAN I NP+LI GQ LTIP
Sbjct: 180 YTVRKGDCLWKIAKRLYGNGAQYAKIFEANRDKIKNPNLIYAGQVLTIP 228
>gi|123965597|ref|YP_001010678.1| LysM domain-containing protein [Prochlorococcus marinus str. MIT
9515]
gi|123199963|gb|ABM71571.1| possible LysM domain [Prochlorococcus marinus str. MIT 9515]
Length = 253
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 98 SNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
S T +SD ++ V+ D + I++ LK I++ NN+ + + I +GQNL I
Sbjct: 41 STKTEISDFNKIHIVQVGDTITSISKFY---SLKKDLIIKLNNLKDENYIYVGQNLKISD 97
Query: 158 PCS----CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
P D +DN+ H+V+EG S I+ K+G + L+++N + + L
Sbjct: 98 PSQEIKHNDGLDNS-----YHIVQEGESLTEISAKYGLNFKDLIEINNLKNPDSLQVSSK 152
Query: 214 L-----DVPLKACNSSIKADSFDNYLRVANGTY 241
L ++ K +S K + D + Y
Sbjct: 153 LFLRKKNIISKKVKASYKEEEIDQLISKKKKNY 185
>gi|389820405|ref|ZP_10209705.1| polysaccharide deacetylase [Planococcus antarcticus DSM 14505]
gi|388462909|gb|EIM05295.1| polysaccharide deacetylase [Planococcus antarcticus DSM 14505]
Length = 340
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPLPCSCDDVD 165
YTVK D L IA+ KY V +ANNI N +LIQ+GQ LTIP + V
Sbjct: 240 YTVKAGDTLYSIAK-------KYNVTVAALAKANNIINYNLIQVGQVLTIPNQTTAPPVT 292
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ K + V+ G + IA+ + T + N I + + + G+ L +P
Sbjct: 293 SVK-----YTVKAGDTLYSIARTYNTTVSIIAAANKITNVNAISVGQVLVIP 339
>gi|425434073|ref|ZP_18814545.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|425471777|ref|ZP_18850628.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389678092|emb|CCH93026.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389882281|emb|CCI37246.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 271
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YT+K D L IA +G K+ I EAN+I+NP+ I +GQ L IP +D + K
Sbjct: 4 YTIKSGDTLRGIALKFYGDASKFVVIQEANDIANPNQISVGQVLEIPELADDNDNNPLKD 63
Query: 170 VHYA 173
H A
Sbjct: 64 FHRA 67
>gi|289578334|ref|YP_003476961.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
gi|289528047|gb|ADD02399.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
Length = 199
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNA 167
+YTVK D + IA +FG + ++ AN IS+P+LI GQ + IP C +
Sbjct: 93 IYTVKPGDTMWSIAN-MFG--ISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETC 149
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI-AGEPLDVP 217
K + + V+ G + IA FG D L++ N D LI G+ + +P
Sbjct: 150 KTI---YTVKPGDTMWSIANMFGVSLDALIRANPQISDPNLIYPGQQICIP 197
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTV+ D + IA FG + ++ AN IS+P+LI GQ + IP C + K
Sbjct: 35 YTVQPGDTMWSIANK-FG--ISLDCLIRANPQISDPNLIYPGQRICIPYYCPPVFPETCK 91
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI-AGEPLDVPL-------KA 220
+ + V+ G + IA FG D L++ N D LI G+ + +P +
Sbjct: 92 TI---YTVKPGDTMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPET 148
Query: 221 CNSSIKADSFDNYLRVAN 238
C + D +AN
Sbjct: 149 CKTIYTVKPGDTMWSIAN 166
>gi|149182701|ref|ZP_01861168.1| spore peptidoglycan hydrolase (N-acetylglucosaminidase) [Bacillus
sp. SG-1]
gi|148849611|gb|EDL63794.1| spore peptidoglycan hydrolase (N-acetylglucosaminidase) [Bacillus
sp. SG-1]
Length = 434
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 123 RTIFGQLLKY----QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEE 178
+++FG Y + IVEAN++ NPD + +GQ L IP +V + V+
Sbjct: 17 QSLFGIAQTYNSTTEDIVEANDLPNPDNLVVGQTLVIP------------IVGLFYFVQP 64
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
G S I+ +FG L ++NGI + L G L +P +
Sbjct: 65 GDSLWSISNRFGISYQELAQINGISVNQGLQVGFRLYIPER 105
>gi|418324088|ref|ZP_12935340.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus
pettenkoferi VCU012]
gi|365227746|gb|EHM68935.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus
pettenkoferi VCU012]
Length = 341
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI--------PLPCSC 161
YTVK+ D L IAR +G + YQ+++ NN+SN LI GQNL + P +
Sbjct: 93 YTVKRGDTLFGIARR-YG--VNYQQLMRNNNLSNT-LIYPGQNLKVSGRAISSTPNQTTT 148
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ A + V+ G S IA + G + LM LNG+ + + G+ L V
Sbjct: 149 NRTPAANNNSSVYTVQRGDSLYGIASRHGMNLQRLMALNGL-SNYFIYPGQKLKV 202
>gi|83593102|ref|YP_426854.1| peptidase M23B [Rhodospirillum rubrum ATCC 11170]
gi|83576016|gb|ABC22567.1| peptidase M23B [Rhodospirillum rubrum ATCC 11170]
Length = 465
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 25/139 (17%)
Query: 95 CICSNGTGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPD 145
+ S G G SD P YTV + D + ++R FG + I++ N +S P
Sbjct: 55 AVASCGGGSSDFGPTPDSERQARSYTVAQGDTVYAVSRR-FG--IPVPAIIKENALSPPF 111
Query: 146 LIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDD 205
++ IGQ L +P K+ H V G + IA+++ D + L +LN I D
Sbjct: 112 ILHIGQVLRLP---------GQKI----HTVARGDTLYSIAKRYSIDMNRLARLNAIDDT 158
Query: 206 SKLIAGEPLDVPLKACNSS 224
+ + G+ L +P + S
Sbjct: 159 NLIKVGQALSIPGEEAPPS 177
>gi|421191462|ref|ZP_15648736.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB548]
gi|399971580|gb|EJO05820.1| LysM repeat-containing muramidase [Oenococcus oeni AWRIB548]
Length = 469
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI--------PLPCSC 161
YTV D L IA+ +G + I ANNISNPD I +G+ LTI P S
Sbjct: 358 YTVASGDTLTSIAKA-YGTTVS--AIATANNISNPDYIYVGEVLTIGSSTSTSTSTPTSS 414
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ ++ V G + IA+ +G TL KLN I + + + AG L +
Sbjct: 415 TSSSSTSSSSKSYTVASGDTLTSIAKAYGVSISTLAKLNNISNTNLIYAGTTLKI 469
>gi|297544613|ref|YP_003676915.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842388|gb|ADH60904.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 199
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNA 167
+YTVK D + IA +FG + ++ AN IS+P+LI GQ + IP C +
Sbjct: 93 IYTVKPGDTMWSIAN-MFG--ISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETC 149
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG-IHDDSKLIAGEPLDVP 217
K + + V+ G + IA FG D L++ N I D + + G+ + +P
Sbjct: 150 KTI---YTVKPGDTMWSIANMFGVSLDALIRANPQISDPNLIYPGQQICIP 197
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTV+ D + IA FG L ++ AN IS+P+LI GQ + IP C + K
Sbjct: 35 YTVQPGDTMWSIANK-FGVSLD--CLIRANPQISDPNLIYPGQRICIPYYCPPVFPETCK 91
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG-IHDDSKLIAGEPLDVPL-------KA 220
+ + V+ G + IA FG D L++ N I D + + G+ + +P +
Sbjct: 92 TI---YTVKPGDTMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPET 148
Query: 221 CNSSIKADSFDNYLRVAN 238
C + D +AN
Sbjct: 149 CKTIYTVKPGDTMWSIAN 166
>gi|317130884|ref|YP_004097166.1| glycoside hydrolase family protein [Bacillus cellulosilyticus DSM
2522]
gi|315475832|gb|ADU32435.1| glycoside hydrolase family 18 [Bacillus cellulosilyticus DSM 2522]
Length = 1328
Score = 45.8 bits (107), Expect = 0.033, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 94 HCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL 153
H + +K VYTVK+ D L IAR + Q + +AN + + D+I IGQ L
Sbjct: 83 HATTPSQISTEEKYDVYTVKRGDSLSVIARD---HDITVQALKDANGLKS-DIIFIGQQL 138
Query: 154 TIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
+P Y + V +G S IA+ F D ++ N + D ++ G+
Sbjct: 139 KLPF--------------YTYTVLQGDSLFTIARHFQVTVDDIIATNRLTSD-RIFPGQK 183
Query: 214 LDVPLKACNSSIKADSFDNYLRVANGTYTF 243
L +P + +K D T+T+
Sbjct: 184 LRLP--TTSKGVKVDEPQPIKATVEPTFTY 211
Score = 43.1 bits (100), Expect = 0.20, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 18/121 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL-----------P 158
YTV D L IA+ + I + NN+S+ D+I+IGQ+L IP+ P
Sbjct: 285 YTVVSGDSLSVIAKRFNTTV---TAIKQENNLSS-DIIRIGQSLKIPVIKQEDNITENPP 340
Query: 159 CSCDDVDNAKVVH--YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
++++ ++ V G S ++IA+++GT D + LN + D + G+ L +
Sbjct: 341 TDGENIERGDETQNTISYTVVSGDSLSVIAKRYGTSVDAIRTLNNLTSD-LIRVGQVLHI 399
Query: 217 P 217
P
Sbjct: 400 P 400
>gi|255547606|ref|XP_002514860.1| kinase, putative [Ricinus communis]
gi|223545911|gb|EEF47414.1| kinase, putative [Ricinus communis]
Length = 594
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEANNISNPDL 146
P PI G+ P YT+K F IA + L Q + N +P+
Sbjct: 67 PYDTPISIAYVLGSIYQHNTP-YTIKNLTESYFTIANNTYQGLTTCQALT-GQNYYDPEH 124
Query: 147 IQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIH 203
+Q+G L +PL C+C + + + ++V G + + I Q FG D ++++ N +
Sbjct: 125 LQVGMELMVPLRCACPSRNQTADGVISLLMYMVTWGDTLSSIGQAFGADAASILEANRLS 184
Query: 204 DDSKLIAGEPLDVPLK 219
+S + P+ VPL+
Sbjct: 185 QNSIIFPFTPILVPLR 200
>gi|452980475|gb|EME80236.1| carbohydrate-binding module family 50 protein [Pseudocercospora
fijiensis CIRAD86]
Length = 413
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPL-PCS-CDDVD 165
Y ++ D L IA+ + I+ AN NI+NPDLIQ+GQ L I + P S CD V
Sbjct: 301 AYNIRSGDTLTAIAKDFN---ITLASILAANPNITNPDLIQVGQQLKITVCPNSRCDSVG 357
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGE 212
+++++ G F +A K+ + LN D SK G+
Sbjct: 358 -------SYIIKSGDLFVDLATKYKATVGQIKALNPTVDPSKTAPGD 397
>gi|373853966|ref|ZP_09596764.1| Peptidoglycan-binding lysin domain protein [Opitutaceae bacterium
TAV5]
gi|372471833|gb|EHP31845.1| Peptidoglycan-binding lysin domain protein [Opitutaceae bacterium
TAV5]
Length = 383
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+K D L IAR +K ++ ANNIS ++IGQ L +P+ + ++
Sbjct: 124 YEVQKGDSLWTIARK---HGIKTTELAAANNISGNATLRIGQKLVVPVASTAAPSADSPT 180
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ V G + IA+K G L N + D+ L G+ L +P
Sbjct: 181 GSMSYTVVSGDTLGAIARKHGVKLAALRSANNLRGDN-LRVGQVLTIP 227
>gi|224086140|ref|XP_002307830.1| predicted protein [Populus trichocarpa]
gi|222857279|gb|EEE94826.1| predicted protein [Populus trichocarpa]
Length = 659
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 10/200 (5%)
Query: 24 TAQDFKCSAQTAARCQALVGY--LPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
T + F C+ + CQ+ + + +PP + + L ++ I NN T
Sbjct: 46 TTKGFLCNG-VQSSCQSYLTFRSMPPYNSPVLIAYLLGVPQSATRIASINNLSSDTA--- 101
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
++P + VP++C C K + +A + L Q ++ N
Sbjct: 102 TIPTNTQVVVPVNCSCYARQYYQHNSTYQLKDKSETYFSVANNTYQGLTTCQSLMSQNPY 161
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVD-NAKVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
+ +L +G L IPL C+C + NA +++ ++V G S + IAQ FG D+ ++
Sbjct: 162 GDRNL-SLGLTLQIPLRCACPTSNQNASGINHLLTYMVTWGDSISSIAQLFGVDKQRVLD 220
Query: 199 LNGIHDDSKLIAGEPLDVPL 218
N + + + P+ VPL
Sbjct: 221 ANKLSSSNIIFPFTPILVPL 240
>gi|260365585|ref|ZP_05778114.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus K5030]
gi|308111316|gb|EFO48856.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus K5030]
Length = 248
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 80/211 (37%), Gaps = 25/211 (11%)
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
P P +P +K + G G+ KV Y VK D L +A+ +G K
Sbjct: 33 PEGPHQLLIPVEKKDAFLTQVESNRGKGM--KVARYKVKPGDSLSMLAKK-YGTTSKV-- 87
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH---------------YAHVVEEG 179
I AN +SN + I+IGQ L IP + DD A +HVV+ G
Sbjct: 88 IRRANGLSNNN-IRIGQYLLIP-TSTKDDSKYALTAQNRLNKTQSQARGQLKLSHVVQSG 145
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANG 239
S IA+ +L K NG+ L G+ L + K+ ++ F N V +G
Sbjct: 146 ESLWSIARDNKVSHKSLAKWNGMGPKDTLRVGQKLVIWKKSDQGAVIRTVFYN---VRSG 202
Query: 240 TYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
S K + + W K +P
Sbjct: 203 DTISGIASKFKVKSNDIVKWNSLHKQKYLKP 233
>gi|397691582|ref|YP_006528836.1| Membrane-bound lytic murein transglycosylase D [Melioribacter
roseus P3M]
gi|395813074|gb|AFN75823.1| Membrane-bound lytic murein transglycosylase D [Melioribacter
roseus P3M]
Length = 918
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVKK D + IA FG ++ I E NN+ N +LI++GQNL I DN
Sbjct: 749 YTVKKGDTISEIADK-FG--VRVSNIKEWNNLRN-NLIRVGQNLKIYQKNENLPNDNKSS 804
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSS 224
+VV+ G S IA KF D L N ++ + K+ G+ L V N+S
Sbjct: 805 NSEYYVVKRGDSLIEIADKFNVTVDDLKNWNRLNSN-KIFVGQKLTVKNGVENNS 858
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%)
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
D+AKV + H V+ G S IA K+ L N I SKL G L +P+ + N
Sbjct: 421 DDAKVQYTVHTVKSGESLWQIASKYNVSISQLASYNNISPRSKLSVGTELKIPVSSIN 478
>gi|269966273|ref|ZP_06180362.1| Membrane-bound lytic murein transglycosylase D [Vibrio
alginolyticus 40B]
gi|269829188|gb|EEZ83433.1| Membrane-bound lytic murein transglycosylase D [Vibrio
alginolyticus 40B]
Length = 527
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 86/230 (37%), Gaps = 28/230 (12%)
Query: 59 FTVKNLRSILGANN---FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKD 115
+VK L+S A N P P +PA+K + G G+ KV Y VK
Sbjct: 293 ISVKELQSYNPAYNQWSTAPEGPHQLLIPAEKKETFLTKVEKNRGKGM--KVARYKVKSG 350
Query: 116 DGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH---- 171
D L +A +G K I AN +SN + I+IGQ L IP + DD A
Sbjct: 351 DSLSVLANK-YGTTTKV--IRRANGLSNNN-IRIGQYLLIPT-STKDDAKYALTAQNRLN 405
Query: 172 -----------YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
HVV+ G S IA+ +L K NG+ L G+ L + +
Sbjct: 406 KTQSRARGQLKLTHVVQSGESLWSIARNNKVSYKSLAKWNGMGPKDPLRVGQKLVIWKDS 465
Query: 221 CNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
S+ F N V +G S K + + W K QP
Sbjct: 466 DKGSVIRTVFYN---VRSGDTISGIASKFKVKTNDIVKWNSLHKKKYLQP 512
>gi|159896766|ref|YP_001543013.1| peptidoglycan-binding LysM [Herpetosiphon aurantiacus DSM 785]
gi|159889805|gb|ABX02885.1| Peptidoglycan-binding LysM [Herpetosiphon aurantiacus DSM 785]
Length = 242
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNI---SNPDLIQIGQNLTIPLPCSCDDVDN 166
YTV+ D L I+ +G ++++I EAN +NPD+I +GQ IP D
Sbjct: 132 YTVQGGDTLGKISARFYGDAAQWRRIYEANRAIIGNNPDVISVGQEFVIP------DAST 185
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTD 192
V + V G + IAQ+F D
Sbjct: 186 PLPVQRTYTVRSGDTMRAIAQRFYGD 211
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLTIP 156
YTV+ D + IA+ +G +++++I +AN I NPD+I +GQ IP
Sbjct: 193 YTVRSGDTMRAIAQRFYGDEMQWKRIYQANRDRIPNPDVIHVGQEFIIP 241
>gi|386825555|ref|ZP_10112677.1| LysM domain/BON superfamily protein [Serratia plymuthica PRI-2C]
gi|386377558|gb|EIJ18373.1| LysM domain/BON superfamily protein [Serratia plymuthica PRI-2C]
Length = 148
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
+GV DKV V YTVKK D L +++ ++G Y KI EAN +S+PD I
Sbjct: 81 SGVEDKVSVAQSAAESRFYTVKKGDTLSAVSKEVYGNANLYNKIFEANKPMLSSPDKIYP 140
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 141 GQVLRIP 147
>gi|333368237|ref|ZP_08460447.1| peptidoglycan-binding LysM [Psychrobacter sp. 1501(2011)]
gi|332977627|gb|EGK14395.1| peptidoglycan-binding LysM [Psychrobacter sp. 1501(2011)]
Length = 167
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIPLP 158
+YTVK D L IA+ ++G +Y KI EAN +S+PD I GQ L IP P
Sbjct: 116 MYTVKSGDSLSKIAQEVYGSANEYNKIFEANKPMLSSPDKIYPGQVLRIPKP 167
>gi|229084243|ref|ZP_04216526.1| Cell wall hydrolase [Bacillus cereus Rock3-44]
gi|228699043|gb|EEL51745.1| Cell wall hydrolase [Bacillus cereus Rock3-44]
Length = 265
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
PI + SN GV+D ++TV K+D L + T++G + Q I +AN+ +N D I
Sbjct: 11 PIPAATITLVSN-QGVADAATIHTVNKNDTL-WDLSTLYG--VSVQAIKQANHKTN-DRI 65
Query: 148 QIGQNLTIPLPCSCDDV----DNAKVVHYAHV---VEEGSSFALIAQKFGTDRDTLMKLN 200
IG+ LTIP+ S ++ D A H A V++G + IA+++ + + N
Sbjct: 66 YIGEQLTIPISYSTNESTPQKDIAASNHSAQTVYQVQQGDTLGAIAERYNVSIQAIKQAN 125
Query: 201 GIHDDSKLIAGEPL 214
+ D ++ G+ L
Sbjct: 126 HTNGD-RIYTGQHL 138
>gi|167040221|ref|YP_001663206.1| peptidoglycan-binding LysM [Thermoanaerobacter sp. X514]
gi|300914305|ref|ZP_07131621.1| spore coat assembly protein SafA [Thermoanaerobacter sp. X561]
gi|307724459|ref|YP_003904210.1| spore coat assembly protein SafA [Thermoanaerobacter sp. X513]
gi|166854461|gb|ABY92870.1| Peptidoglycan-binding LysM [Thermoanaerobacter sp. X514]
gi|300889240|gb|EFK84386.1| spore coat assembly protein SafA [Thermoanaerobacter sp. X561]
gi|307581520|gb|ADN54919.1| spore coat assembly protein SafA [Thermoanaerobacter sp. X513]
Length = 142
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTV+ D + IA +FG + ++ AN IS+P+LI GQ + IP C + K
Sbjct: 35 YTVQPGDTMWSIAN-MFG--ISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETCK 91
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI-AGEPLDVPLKAC 221
+ + V+ G S IA FG D L++ N D LI G+ + +P C
Sbjct: 92 TI---YTVKPGDSMWSIANMFGVSLDALIRANPQIPDPNLIYPGQQICIPSANC 142
>gi|148652271|ref|YP_001279364.1| LysM domain/BON superfamily protein [Psychrobacter sp. PRwf-1]
gi|148571355|gb|ABQ93414.1| Peptidoglycan-binding LysM [Psychrobacter sp. PRwf-1]
Length = 168
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIPLP 158
+YTVK D L IA+ ++G +Y KI EAN +S+PD I GQ L IP P
Sbjct: 117 MYTVKSGDSLSKIAQEVYGSANEYNKIFEANKPMLSSPDKIYPGQVLRIPKP 168
>gi|448242615|ref|YP_007406668.1| hypothetical protein SMWW4_v1c28540 [Serratia marcescens WW4]
gi|445212979|gb|AGE18649.1| hypothetical protein SMWW4_v1c28540 [Serratia marcescens WW4]
Length = 148
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
+GV DKV V YTVKK D L I++ ++G Y KI EAN +S+PD I
Sbjct: 81 SGVEDKVAVAQSDAESRFYTVKKGDTLSAISKEMYGNANLYNKIFEANKPMLSSPDKIYP 140
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 141 GQVLRIP 147
>gi|410658545|ref|YP_006910916.1| putative glycosyl hydrolase [Dehalobacter sp. DCA]
gi|410661532|ref|YP_006913903.1| putative glycosyl hydrolase [Dehalobacter sp. CF]
gi|409020900|gb|AFV02931.1| putative glycosyl hydrolase [Dehalobacter sp. DCA]
gi|409023888|gb|AFV05918.1| putative glycosyl hydrolase [Dehalobacter sp. CF]
Length = 426
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
QK++ N ++NP + +GQ L I L S H V G S LIAQK G
Sbjct: 24 QKMIADNELTNPSQLVVGQTLVI-LESSG-----------THTVAAGESLYLIAQKHGVT 71
Query: 193 RDTLMKLN-GIHDDSKLIAGEPLDVPLKACN 222
+ L+ N I D S++ AG+ + +P A +
Sbjct: 72 VNALLAANPRITDPSRIYAGQTIAIPAAAAS 102
>gi|417319203|ref|ZP_12105761.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus 10329]
gi|328474393|gb|EGF45198.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus 10329]
Length = 528
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 87/228 (38%), Gaps = 28/228 (12%)
Query: 61 VKNLRSILGANN---FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDG 117
VK L+S A N P P +P +K + G G+ KV Y VK D
Sbjct: 296 VKELQSYNPAYNQWSTAPEGPHQLLIPVEKKDAFLTQVESNRGKGM--KVARYKVKSGDS 353
Query: 118 LDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH------ 171
L +A+ +G K I AN +SN + I+IGQ L IP + DD A
Sbjct: 354 LSMLAKK-YGTTSKV--IRRANGLSNNN-IRIGQYLLIPT-STKDDSKYALTAQNRLNKT 408
Query: 172 ---------YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
+HVV+ G S IA+ +L K NG+ L G+ L + K+
Sbjct: 409 QSQARGQLKLSHVVQSGESLWSIARDNKLSHKSLAKWNGMGPKDTLRVGQKLVIWKKSDQ 468
Query: 223 SSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
++ F N V +G S K + + W K +P
Sbjct: 469 GAVIRTVFYN---VRSGDTISGIASKFKVKSNDIVKWNSLHKQKYLKP 513
>gi|366052197|ref|ZP_09449919.1| hypothetical protein LsueK3_01574 [Lactobacillus suebicus KCTC
3549]
Length = 782
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA +G + + N ISN + I +GQ + + S ++
Sbjct: 680 YTVKSGDTLSAIAAK-YG--VSVSTLASLNGISNANSILVGQTIKLSGSSSSSKTSSSSS 736
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
A+ V+ G + + IA K+G TL LNGI D + ++ G+ + +
Sbjct: 737 SS-AYTVKSGDTLSAIAAKYGVSVSTLASLNGISDTNTILIGQKIKL 782
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA +G + + N ISN + I +GQ + + S ++
Sbjct: 618 YTVKSGDTLSAIAAK-YG--VSVSTLASINGISNANSILVGQTIKLSGSSSSSSSTSSSS 674
Query: 170 VHY-AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
A+ V+ G + + IA K+G TL LNGI + + ++ G+ + +
Sbjct: 675 SSSSAYTVKSGDTLSAIAAKYGVSVSTLASLNGISNANSILVGQTIKL 722
>gi|166363067|ref|YP_001655340.1| hypothetical protein MAE_03260 [Microcystis aeruginosa NIES-843]
gi|166085440|dbj|BAG00148.1| hypothetical protein MAE_03260 [Microcystis aeruginosa NIES-843]
Length = 196
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
YT+K D L IA +G K+ I EAN+I+NP+ I +GQ L I P DD DN
Sbjct: 4 YTIKSGDTLRGIALKFYGDASKFVVIQEANDIANPNQISVGQVLEI--PELADDNDN 58
>gi|422559985|ref|ZP_16635685.1| LysM domain protein, partial [Propionibacterium acnes HL005PA1]
gi|314984748|gb|EFT28840.1| LysM domain protein [Propionibacterium acnes HL005PA1]
Length = 903
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ +D L IA +G ++++I EA+ I ++ GQ L +P+P + V + K
Sbjct: 163 YTVRANDYLWKIAEHYYGDGAQFRRIAEASGIDPHSELKAGQKLILPVPKNTAAVHSVKA 222
Query: 170 VHY-----AHVVEEGSSFALIAQKFGTD 192
Y H +G+ + IA+ G D
Sbjct: 223 GEYLWKIAEHYYGDGAQYHKIAEASGID 250
>gi|308187320|ref|YP_003931451.1| phage-like element PBSX protein xkdP [Pantoea vagans C9-1]
gi|308057830|gb|ADO10002.1| Phage-like element PBSX protein xkdP [Pantoea vagans C9-1]
Length = 85
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 98 SNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTI 155
++ + SD+ YTVK D L IA+ + KY KI EAN +SNPD I GQ LTI
Sbjct: 26 TDASAASDRT--YTVKSGDTLSAIAKQFYNDASKYMKIFEANKNILSNPDNIAPGQVLTI 83
Query: 156 P 156
P
Sbjct: 84 P 84
>gi|419758757|ref|ZP_14285071.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB304]
gi|399904587|gb|EJN92041.1| LysM repeat-containing muramidase, partial [Oenococcus oeni
AWRIB304]
Length = 366
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI--------PLPCSC 161
YTV D L IA+ +G + I ANNISNPD I +G+ LTI P S
Sbjct: 255 YTVASGDTLTSIAKA-YGTTVS--AIATANNISNPDYIYVGEVLTIGSSTSTSTSTPTSS 311
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ ++ V G + IA+ +G TL KLN I + + + AG L +
Sbjct: 312 TSSSSTSSSSKSYTVASGDTLTSIAKAYGVSISTLAKLNNISNTNLIYAGTTLKI 366
>gi|424739190|ref|ZP_18167611.1| spore germination protein [Lysinibacillus fusiformis ZB2]
gi|422946828|gb|EKU41233.1| spore germination protein [Lysinibacillus fusiformis ZB2]
Length = 469
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
+YTV+ D L IA+ L Q I+ N+++NPDL+ G L IP P
Sbjct: 52 IYTVQNGDTLWSIAQKFSVPL---QSIIIENHLTNPDLLTPGTKLIIP-PI--------- 98
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKAD 228
H V+ G + IAQ++GT + N +++ + L G L +P K + A
Sbjct: 99 ----VHNVQPGETLWQIAQRYGTTVQAIAVENNLNNPNMLYVGSQLMIPRKLPMIEVNAY 154
Query: 229 SF 230
S+
Sbjct: 155 SY 156
>gi|381208539|ref|ZP_09915610.1| glycoside hydrolase family protein [Lentibacillus sp. Grbi]
Length = 470
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 17/111 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+ D L IA+ +FG + Q++ ANNI++P LI IGQ L P
Sbjct: 53 YVVQSGDTLWQIAQ-MFG--VTAQELAVANNITDPSLIFIGQMLINP------------- 96
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
++ H V+ G IAQ++ + ++ +N I + G+ L +P+ A
Sbjct: 97 -YFIHTVQAGEFIWGIAQQYDVSAEQIIAVNDIGQSGLIFPGQTLRIPVAA 146
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 134 KIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDR 193
+IV N + NPD++ +GQ+L IP P +VV+ G + IAQ FG
Sbjct: 25 QIVLLNELGNPDVLVVGQSLVIPEPGRD------------YVVQSGDTLWQIAQMFGVTA 72
Query: 194 DTLMKLNGIHDDSKLIAGEPL 214
L N I D S + G+ L
Sbjct: 73 QELAVANNITDPSLIFIGQML 93
>gi|28899070|ref|NP_798675.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus RIMD 2210633]
gi|153839748|ref|ZP_01992415.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus AQ3810]
gi|260876848|ref|ZP_05889203.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus AN-5034]
gi|260897329|ref|ZP_05905825.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus Peru-466]
gi|28807294|dbj|BAC60559.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus RIMD 2210633]
gi|149746732|gb|EDM57720.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus AQ3810]
gi|308088240|gb|EFO37935.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus Peru-466]
gi|308091446|gb|EFO41141.1| membrane-bound lytic murein transglycosylase D [Vibrio
parahaemolyticus AN-5034]
Length = 528
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 87/228 (38%), Gaps = 28/228 (12%)
Query: 61 VKNLRSILGANN---FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDG 117
VK L+S A N P P +P +K + G G+ KV Y VK D
Sbjct: 296 VKELQSYNPAYNQWSTAPEGPHQLLIPVEKKDAFLTQVESNRGKGM--KVARYKVKPGDS 353
Query: 118 LDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH------ 171
L +A+ +G K I AN +SN + I+IGQ L IP + DD A
Sbjct: 354 LSMLAKK-YGTTSKV--IRRANGLSNNN-IRIGQYLLIPT-STKDDSKYALTAQNRLNKT 408
Query: 172 ---------YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
+HVV+ G S IA+ +L K NG+ L G+ L + K+
Sbjct: 409 QSQARGQLKLSHVVQSGESLWSIARDNKVSHKSLAKWNGMGPKDTLRVGQKLVIWKKSDQ 468
Query: 223 SSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
++ F N V +G S K + + W K +P
Sbjct: 469 GAVIRTVFYN---VRSGDTISGIASKFKVKSNDIVKWNSLHKQKYLKP 513
>gi|125538440|gb|EAY84835.1| hypothetical protein OsI_06201 [Oryza sativa Indica Group]
Length = 689
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 83 VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLD---FIARTIFGQLLKYQKIVEAN 139
V A + + P+ C CS G G +T++ D G++ IA + L Q ++ N
Sbjct: 110 VAADRLVLAPVPCGCSPG-GYYQHNASHTIR-DTGVETYFIIANLTYQGLSTCQALIAQN 167
Query: 140 NISNPDLIQIGQNLTIPLPCSCDDVDNAK--VVHYA-HVVEEGSSFALIAQKFGTDRDTL 196
+ + + G NLT+PL C+C A V H ++V G + + IA +F D +
Sbjct: 168 PLHDSRGLVAGDNLTVPLRCACPSPPQAAAGVKHMVTYLVTWGDTVSAIAARFRVDAQEV 227
Query: 197 MKLNGIHDDSKLIAGEPLDVPLK 219
+ N + + S + L VPLK
Sbjct: 228 LDANTLAESSIIYPFTTLLVPLK 250
>gi|421784027|ref|ZP_16220470.1| lysM domain protein [Serratia plymuthica A30]
gi|407753890|gb|EKF64030.1| lysM domain protein [Serratia plymuthica A30]
Length = 148
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
+GV DKV V YTVKK D L +++ ++G Y KI EAN +S+PD I
Sbjct: 81 SGVEDKVSVAQSEAESRFYTVKKGDTLSAVSKEVYGNANLYNKIFEANKPMLSSPDRIYP 140
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 141 GQVLRIP 147
>gi|386283643|ref|ZP_10060867.1| hypothetical protein SULAR_00285 [Sulfurovum sp. AR]
gi|385345186|gb|EIF51898.1| hypothetical protein SULAR_00285 [Sulfurovum sp. AR]
Length = 335
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V D L IA+ FG L Q+I + N I ++IGQ L +P D V
Sbjct: 123 YRVVSGDALSKIAKK-FG--LTTQEIAKMNGIRIQSPLRIGQKLKLPFEQKRIDA----V 175
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
+ + EG + IA+KF + + LM+ N I ++ + G + +PL + +K
Sbjct: 176 SSGNYFIREGDTIISIAKKFDLEPEDLMQFNKIKRNAIIRTGRMIRLPLPHILAHLKT-- 233
Query: 230 FDNYLRVANGTYT 242
+ LRV YT
Sbjct: 234 -EKRLRVTATAYT 245
>gi|307103161|gb|EFN51424.1| hypothetical protein CHLNCDRAFT_141036 [Chlorella variabilis]
Length = 139
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
SVP + +H C+ G P YT+K D LD IA++ + + NNI
Sbjct: 8 SVPEALTYRRKLHASCACG-------PSYTIKPGDSLDAIAKSCGSTV---DDLAATNNI 57
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNAK---VVHYAHVVEEGSSFALIAQKFGTDRDTLMK 198
N D+I +G LTIP S + ++ ++ G S IA+ G+ L
Sbjct: 58 PNIDIITVGTVLTIPGCGSGGQTASTSSSCTCGPSYTIKPGDSLDAIAKSCGSTVADLAA 117
Query: 199 LNGIHDDSKLIAGEPLDVP 217
N I + + AG L +P
Sbjct: 118 TNNISNIDLITAGTVLTIP 136
>gi|323651026|ref|YP_004243669.1| lyzozyme M1 [Bacillus subtilis subsp. natto]
gi|323461666|dbj|BAJ77082.1| lyzozyme M1 [Bacillus subtilis subsp. natto]
Length = 451
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQ----KIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
Y VK D L IA KY+ K+V N I NP+ + I Q L +P S
Sbjct: 350 YKVKSGDTLSEIA-------AKYKTSVSKLVSLNKIKNPNKLYISQKLKVPTKASVAKKA 402
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+K + V++G S + IA K+ T + LN + + +K+ G+ L V
Sbjct: 403 ASKTY---YTVKKGDSVSKIAVKYKTTVSKIKSLNKLKNPNKIYVGQKLRV 450
>gi|251798380|ref|YP_003013111.1| peptidoglycan-binding LysM [Paenibacillus sp. JDR-2]
gi|247546006|gb|ACT03025.1| Peptidoglycan-binding LysM [Paenibacillus sp. JDR-2]
Length = 778
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNA 167
++ VKK D L FIA+ + + I++ N +I+NPD++ +G L +P S ++V
Sbjct: 3 IHVVKKGDTLYFIAQK---HNVSIEDILKLNPSITNPDMLDVGMKLKVP---SANEVGGG 56
Query: 168 KV---VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG-IHDDSKLIAGEPLDVPLKACNS 223
+ + HVV++G + +++ +G ++K N + + + L+ GE +++P A +
Sbjct: 57 TGGLDIMHQHVVKQGDTLWKLSKAWGVPLADMIKANPQLKNPNVLLTGEIVNIPKTATPT 116
Query: 224 SIKADSF 230
++
Sbjct: 117 EVQGGGV 123
>gi|333395629|ref|ZP_08477446.1| phage-related lysin [Lactobacillus coryniformis subsp. coryniformis
KCTC 3167]
Length = 485
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 55/135 (40%), Gaps = 17/135 (12%)
Query: 94 HCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA----NNISNPDLIQI 149
+ GT + YTV+ D L IA KY V A N ISN D I I
Sbjct: 319 EILSVTGTIATSSGSTYTVQSGDTLSGIA-------AKYGTSVSALASLNGISNADYIYI 371
Query: 150 GQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI 209
GQ LT+ + A V Y + V+ G + + IA G TL NGI + + +
Sbjct: 372 GQKLTVKGNATA-----ASVTSY-YTVKSGDTLSAIAAAHGLTTATLAAYNGITNYNMIY 425
Query: 210 AGEPLDVPLKACNSS 224
G+ L A +S
Sbjct: 426 TGQQLKFSGGATATS 440
>gi|290490580|dbj|BAI79277.1| LysM type receptor kinase [Lotus japonicus]
gi|290490600|dbj|BAI79287.1| LysM type receptor kinase [Lotus japonicus]
Length = 667
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 89 IKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEANNISNPDLI 147
+ VP+ C CS G + Y +KK F IA + L Q ++ N +L
Sbjct: 110 VTVPVTCSCSGGRYQHN--ATYNLKKTGETYFSIANNTYQSLTTCQALMAQNPYDAKNLF 167
Query: 148 QIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD 204
G +L +PL C+C D ++V +G S IA+ FG D +++ N +
Sbjct: 168 A-GDDLHVPLRCACPTKKQSDAGFKYLLTYLVSQGESPDSIAEIFGVDTQSVLDANELDS 226
Query: 205 DSKLIAGEPLDVPLK 219
S + PL VPLK
Sbjct: 227 KSVVFYFTPLLVPLK 241
>gi|116749475|ref|YP_846162.1| LysM domain/BON superfamily protein [Syntrophobacter fumaroxidans
MPOB]
gi|116698539|gb|ABK17727.1| Peptidoglycan-binding LysM [Syntrophobacter fumaroxidans MPOB]
Length = 143
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIPL 157
KV Y +KK D L IA+ G Y KI EAN I +P+LI +GQ + IPL
Sbjct: 89 KVEYYVIKKGDTLSAIAKQFLGNANDYPKIFEANREVIRDPNLIFVGQKIRIPL 142
>gi|126652690|ref|ZP_01724851.1| spore peptidoglycan hydrolase (N-acetylglucosaminidase) [Bacillus
sp. B14905]
gi|126590539|gb|EAZ84657.1| spore peptidoglycan hydrolase (N-acetylglucosaminidase) [Bacillus
sp. B14905]
Length = 469
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA+ FG L Q I+ N+++NPD++ G L IP P
Sbjct: 53 YTVKSGDTLWSIAQQ-FGVPL--QAILADNHLTNPDMLTPGTKLIIP-PV---------- 98
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
H+V+ G + IAQ + T ++ N I++ + + G L +P K + A S
Sbjct: 99 ---VHIVQPGETLWQIAQNYDTTIQAIIAANHINNPNMIYVGAQLIIPRKLPLIEVNAYS 155
Query: 230 F 230
+
Sbjct: 156 Y 156
>gi|359420167|ref|ZP_09212108.1| putative mannose-binding protein [Gordonia araii NBRC 100433]
gi|358243861|dbj|GAB10177.1| putative mannose-binding protein [Gordonia araii NBRC 100433]
Length = 176
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV D L IA G +Y ++ +AN I+NPDLI +GQ +TIP
Sbjct: 130 YTVVAGDTLFAIAERFLGDGNRYPELAKANGIANPDLINVGQVITIP 176
>gi|227555459|ref|ZP_03985506.1| endolysin, partial [Enterococcus faecalis HH22]
gi|227175399|gb|EEI56371.1| endolysin [Enterococcus faecalis HH22]
Length = 270
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK P + V+ + L IA +G YQ++ N ++NP+LI GQ L +
Sbjct: 168 VPDKQPEATHVVQYGETLSSIAYQ-YGT--NYQRLAALNGLTNPNLIYPGQILKV----- 219
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
N VV + V+ G + + IA K GT TL LNG+ + + + +G+ L
Sbjct: 220 -----NGSVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYSGQTL 268
>gi|389639574|ref|XP_003717420.1| intracellular hyphae protein 1 [Magnaporthe oryzae 70-15]
gi|351643239|gb|EHA51101.1| intracellular hyphae protein 1 [Magnaporthe oryzae 70-15]
gi|440475457|gb|ELQ44130.1| intracellular hyphae protein 1 [Magnaporthe oryzae Y34]
gi|440484117|gb|ELQ64261.1| intracellular hyphae protein 1 [Magnaporthe oryzae P131]
Length = 162
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 83 VPAQKPIKVPIHCICSNGTGVSDKVPV--YTVKKDDGLDFIARTIFGQLLKYQKIVEANN 140
V A P P + T PV YTV+ +D L +++ + + I NN
Sbjct: 14 VAAAMPQATPTSAAPPSATSTCTPGPVVDYTVQGNDTLTIVSQKLNSGICN---IATLNN 70
Query: 141 ISNPDLIQIGQNLTIP-LPCSCDDV-------DNAKVVHYA---HVVEEGSSFALIAQKF 189
++NP+ I +G L +P PC D++ DN V + + G +F L+AQKF
Sbjct: 71 LANPNFIALGAVLKVPTAPCVIDNISCLAKQSDNNTCVSGVSPYYTIVSGDTFFLVAQKF 130
Query: 190 GTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
D L N D L + +++P+
Sbjct: 131 NLSVDALQAANVGADPLLLQLNQVINIPI 159
>gi|365925873|ref|ZP_09448636.1| hypothetical protein LmalK35_08260, partial [Lactobacillus mali
KCTC 3596 = DSM 20444]
Length = 618
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEA----NNISNPDLIQIGQNLTIPLPCSCDDVD 165
YTVK D L IA+T Y V A N+ISN +LI +GQ L + S
Sbjct: 241 YTVKSGDTLSSIAKT-------YSTTVSALASLNSISNTNLIYVGQVLKLKSSSSSTTSS 293
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V+ G + + IA+ +GT L LN I + S + G+ L +
Sbjct: 294 ATSSAS-TYTVKSGDTLSAIAKTYGTTVSALASLNSISNTSLIYVGQVLKL 343
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI------PLPCSCDD 163
YTVK D L IA+T +G + + N+ISN LI +GQ L + S
Sbjct: 301 YTVKSGDTLSAIAKT-YGTTV--SALASLNSISNTSLIYVGQVLKLNSSSSSATSSSSST 357
Query: 164 VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+A + V+ G + + IA+ +GT L LN I + S + G+ L +
Sbjct: 358 TSSATSSASTYTVKSGDTLSAIAKTYGTTVSALASLNSISNTSLIYVGQVLKL 410
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI-----------PLP 158
YTVK D L IA+ +G + I N+ISN LI +GQ L +
Sbjct: 436 YTVKSGDTLSAIAKA-YGTTV--STIASLNSISNTSLIYVGQVLKLNSSSSSASSSGSSS 492
Query: 159 CSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
S ++ + ++ G + + IA+ +GT L LN I + S + G+ L +
Sbjct: 493 TSSSSTSSSSSSSATYTIKSGDTLSSIAKTYGTTVSALASLNSISNTSLIYVGQVLKL 550
>gi|293395681|ref|ZP_06639963.1| LysM domain protein [Serratia odorifera DSM 4582]
gi|291421618|gb|EFE94865.1| LysM domain protein [Serratia odorifera DSM 4582]
Length = 148
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
+GV DKV V +TVKK D L I++ ++G +Y KI EAN +S+PD I
Sbjct: 81 SGVEDKVTVAQGGTESKFHTVKKGDTLSAISKQVYGDANQYNKIFEANKPMLSSPDKIYP 140
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 141 GQVLRIP 147
>gi|312900493|ref|ZP_07759794.1| LysM domain protein, partial [Enterococcus faecalis TX0470]
gi|311292394|gb|EFQ70950.1| LysM domain protein [Enterococcus faecalis TX0470]
Length = 133
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 96 ICSNGTGVSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL 153
+ + T V DK P + V+ + L IA +G YQ++ N ++NP+LI GQ L
Sbjct: 24 LLPDATVVPDKQPEATHVVQYGETLSSIAYQ-YGT--NYQRLAALNGLANPNLIYPGQVL 80
Query: 154 TIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
+ N VV + V+ G + + IA K GT L LNG+ + + + G+
Sbjct: 81 KV----------NGSVVSNVYTVQYGDNLSSIAAKLGTTYQALAALNGLSNPNLIYPGQT 130
Query: 214 LD 215
L+
Sbjct: 131 LN 132
>gi|254478688|ref|ZP_05092059.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
gi|214035375|gb|EEB76078.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 155
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNA 167
+YTV+ D L IA +FG + +++AN IS+P+LI GQ + IP C
Sbjct: 51 IYTVRPGDSLWSIA-NMFG--VSLDCLIKANPQISDPNLIYPGQQICIPFYCPPPSPQTC 107
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI-AGEPLDVP 217
+ ++ A + G S IA FG + L+K N D LI G+ + +P
Sbjct: 108 RTIYTA---KAGDSLWSIANMFGVSLEALIKANPQIPDPNLIYPGQQICIP 155
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 135 IVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDR 193
+++AN I +P+LI GQ + IP C + + + + V G S IA FG
Sbjct: 15 LIKANPQIRDPNLIYPGQQICIPFYCPPVSYEQCRTI---YTVRPGDSLWSIANMFGVSL 71
Query: 194 DTLMKLNGIHDDSKLI-AGEPLDVPL-------KACNSSIKADSFDNYLRVAN 238
D L+K N D LI G+ + +P + C + A + D+ +AN
Sbjct: 72 DCLIKANPQISDPNLIYPGQQICIPFYCPPPSPQTCRTIYTAKAGDSLWSIAN 124
>gi|125974304|ref|YP_001038214.1| peptidoglycan-binding LysM [Clostridium thermocellum ATCC 27405]
gi|256003477|ref|ZP_05428467.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|385779772|ref|YP_005688937.1| Peptidoglycan-binding lysin domain [Clostridium thermocellum DSM
1313]
gi|419722347|ref|ZP_14249491.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum AD2]
gi|419725949|ref|ZP_14252983.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum YS]
gi|125714529|gb|ABN53021.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum ATCC 27405]
gi|255992501|gb|EEU02593.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|316941452|gb|ADU75486.1| Peptidoglycan-binding lysin domain [Clostridium thermocellum DSM
1313]
gi|380770725|gb|EIC04611.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum YS]
gi|380781532|gb|EIC11186.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum AD2]
Length = 503
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L I++ FG + +I AN +++ D+I +GQ L IP+ V
Sbjct: 3 YTVQPGDSLYTISQR-FGVTIA--QIKSANQLTS-DIIYVGQRLYIPIGIQAPVV----- 53
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ V G + LIA+++ T D+LM LN + ++L G+ L +PL
Sbjct: 54 ----YTVRPGDTLYLIARRYNTTVDSLMALNNL-SSTELRIGQQLTIPL 97
>gi|54026958|ref|YP_121200.1| hypothetical protein nfa49840 [Nocardia farcinica IFM 10152]
gi|54018466|dbj|BAD59836.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 212
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA +G +YQ+I +A+ I NPD I GQ LTIP
Sbjct: 166 YTVEPGDTLWAIAERFYGDGNRYQEIADASGIPNPDAINPGQVLTIP 212
>gi|270262286|ref|ZP_06190558.1| hypothetical protein SOD_b04940 [Serratia odorifera 4Rx13]
gi|333927781|ref|YP_004501360.1| peptidoglycan-binding lysin domain-containing protein [Serratia sp.
AS12]
gi|333932735|ref|YP_004506313.1| peptidoglycan-binding lysin domain-containing protein [Serratia
plymuthica AS9]
gi|386329604|ref|YP_006025774.1| peptidoglycan-binding lysin domain-containing protein [Serratia sp.
AS13]
gi|270044162|gb|EFA17254.1| hypothetical protein SOD_b04940 [Serratia odorifera 4Rx13]
gi|333474342|gb|AEF46052.1| Peptidoglycan-binding lysin domain protein [Serratia plymuthica
AS9]
gi|333491841|gb|AEF51003.1| Peptidoglycan-binding lysin domain protein [Serratia sp. AS12]
gi|333961937|gb|AEG28710.1| Peptidoglycan-binding lysin domain protein [Serratia sp. AS13]
Length = 148
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
+GV DKV V YTVKK D L +++ ++G Y KI EAN +S+PD I
Sbjct: 81 SGVEDKVSVAQSEAESRFYTVKKGDTLSAVSKEVYGNANLYNKIFEANKPMLSSPDKIYP 140
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 141 GQVLRIP 147
>gi|157371076|ref|YP_001479065.1| LysM domain/BON superfamily protein [Serratia proteamaculans 568]
gi|157322840|gb|ABV41937.1| Peptidoglycan-binding LysM [Serratia proteamaculans 568]
Length = 148
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
+GV DKV V YTVKK D L +++ ++G Y KI EAN +S+PD I
Sbjct: 81 SGVEDKVSVEQAAAESRFYTVKKGDTLSAVSKEVYGNANLYNKIFEANKPMLSSPDKIYP 140
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 141 GQVLRIP 147
>gi|333896232|ref|YP_004470106.1| peptidoglycan-binding lysin domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111497|gb|AEF16434.1| Peptidoglycan-binding lysin domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 291
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK D L IA+ + + I+ NNI NP LI GQ L +P V
Sbjct: 8 YVVKSGDTLFSIAKKFNTSV---EAIISRNNIINPSLIYPGQTLIVP------------V 52
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V G + LI QKFG ++++ +N I + G+ L +P
Sbjct: 53 TGVYYTVMPGDTIYLIGQKFGIPYESIIYVNNILYPYTIYPGQMLFIP 100
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV----- 164
Y V+ D L IA FG L +I+ AN +P++I GQ + IP P
Sbjct: 143 YIVQPGDTLWSIANK-FGVPL--DEILRANYFMDPNMIYPGQTVVIPCPPKTSPTMPYNP 199
Query: 165 --DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN-GIHDDSKLIAGEPLDVP 217
++ K +VV+ G + IA +F T D +++ N I + S + G+ + +P
Sbjct: 200 PFEHHKEGRMVYVVKPGDTLYNIAARFNTTVDAILRANPDIQNPSLIYPGQRIIIP 255
>gi|381405467|ref|ZP_09930151.1| LysM domain/BON superfamily protein [Pantoea sp. Sc1]
gi|380738666|gb|EIB99729.1| LysM domain/BON superfamily protein [Pantoea sp. Sc1]
Length = 145
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
T V DKV V YTVKK D L I++ ++G +Y KI EAN +S+PD I
Sbjct: 78 TKVEDKVTVTDSAAESELYTVKKGDTLSAISKQVYGNANEYNKIFEANKPMLSHPDKIYP 137
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 138 GQVLRIP 144
>gi|386349834|ref|YP_006048082.1| peptidase M23B [Rhodospirillum rubrum F11]
gi|346718270|gb|AEO48285.1| peptidase M23B [Rhodospirillum rubrum F11]
Length = 412
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 25/139 (17%)
Query: 95 CICSNGTGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPD 145
+ S G G SD P YTV + D + ++R FG + I++ N +S P
Sbjct: 2 AVASCGGGSSDFGPTPDSERQARSYTVAQGDTVYAVSRR-FG--IPVPAIIKENALSPPF 58
Query: 146 LIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDD 205
++ IGQ L +P K+ H V G + IA+++ D + L +LN I D
Sbjct: 59 ILHIGQVLRLP---------GQKI----HTVARGDTLYSIAKRYSIDMNRLARLNAIDDT 105
Query: 206 SKLIAGEPLDVPLKACNSS 224
+ + G+ L +P + S
Sbjct: 106 NLIKVGQALSIPGEEAPPS 124
>gi|414153786|ref|ZP_11410108.1| Cell wall hydrolase SleB [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454807|emb|CCO08012.1| Cell wall hydrolase SleB [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 276
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP-LPCSCDDVDNAK 168
YTV D L I++ + KI ANN++ DLI GQ L++P + + + AK
Sbjct: 31 YTVAAGDSLYLISQKTG---IPVSKIRAANNLTG-DLIFPGQVLSLPEVKPAVAALPPAK 86
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSS 224
A+ V+ G S LIAQK+ T + LM N + + + G+ L +P+ A S+
Sbjct: 87 SPSTAYTVKPGDSLYLIAQKYNTRVEALMLANSL-SGTLIYPGQQLILPVTASRSA 141
>gi|424698342|ref|ZP_18134638.1| LysM domain protein, partial [Enterococcus faecalis ERV41]
gi|402372761|gb|EJV06866.1| LysM domain protein, partial [Enterococcus faecalis ERV41]
Length = 151
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 49 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 100
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L+
Sbjct: 101 -----NGLVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQSLN 150
>gi|357419421|ref|YP_004932413.1| peptidase M23 [Thermovirga lienii DSM 17291]
gi|355396887|gb|AER66316.1| Peptidase M23 [Thermovirga lienii DSM 17291]
Length = 473
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 37/157 (23%)
Query: 78 PRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVE 137
P S+PA++ K I S G + D Y++ D I +
Sbjct: 141 PSEDSLPAEEEEKRWIEYYVSPGDTLYDLGKRYSISPD------------------LIAK 182
Query: 138 ANNISNPDLIQIGQNLTIPLPCSCDDVDNAK-----------------VVHYAHVVEEGS 180
AN++ NPD + GQ L IPL S DDV+ K V ++ V EG
Sbjct: 183 ANDLKNPDRLSEGQELLIPL--SPDDVEATKEEVKARKEKDSKTEARKVEVTSYTVREGD 240
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
S IA KF D +TL N + + + L G L +P
Sbjct: 241 SLWSIANKFNLDINTLFGCNEMKNPNYLRVGMTLRIP 277
>gi|290490582|dbj|BAI79278.1| LysM type receptor kinase [Lotus japonicus]
Length = 666
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 89 IKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEANNISNPDLI 147
+ VP+ C CS G + Y +KK F IA + L Q ++ N +L
Sbjct: 113 VTVPVTCSCSGGRYQHN--ATYNLKKTGETYFSIANNTYQSLTTCQALMAQNPYDAKNLF 170
Query: 148 QIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD 204
G +L +PL C+C D ++V +G S IA+ FG D +++ N +
Sbjct: 171 A-GDDLHVPLRCACPTKKQSDAGFKYLLTYLVSQGESPDSIAEIFGVDTQSVLDANELDS 229
Query: 205 DSKLIAGEPLDVPLK 219
S + PL VPLK
Sbjct: 230 KSVVFYFTPLLVPLK 244
>gi|254446846|ref|ZP_05060321.1| LysM domain protein [Verrucomicrobiae bacterium DG1235]
gi|198256271|gb|EDY80580.1| LysM domain protein [Verrucomicrobiae bacterium DG1235]
Length = 411
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA Q + ++ AN +SN D+I+IGQ L +P ++A +
Sbjct: 240 YTVKAGDSLSRIASR---QGVTVAELKAANGLSN-DMIRIGQELVVPT-----RTNSAAL 290
Query: 170 VHYAH-----VVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA-GEPLDVPLKACN 222
V H VE G + A +G LMKLN I D+ +LI G+ L +P K +
Sbjct: 291 VSKQHRGPKVTVEAGDTLDKYAAIYGVSIADLMKLNNI-DNPRLIRIGQTLLIPEKTSS 348
>gi|85716187|ref|ZP_01047162.1| Peptidase M23B [Nitrobacter sp. Nb-311A]
gi|85697020|gb|EAQ34903.1| Peptidase M23B [Nitrobacter sp. Nb-311A]
Length = 446
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Query: 112 VKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD------ 165
V D L+ ++R +G + +I++AN P +Q GQ L IP S D
Sbjct: 142 VGTSDTLEGLSRR-YG--VSTAEILKANGYRGPRRLQPGQRLIIPKRASVADSQTTPAAK 198
Query: 166 --NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
NA+ H V G + IA++ L + NG+ +KL G + VP K
Sbjct: 199 PANARTASGTHYVNRGDTLMSIARRNQISVGELARANGLQPKAKLKVGMKITVPTKVA 256
>gi|256959304|ref|ZP_05563475.1| lysin [Enterococcus faecalis DS5]
gi|422711443|ref|ZP_16768372.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0027]
gi|256949800|gb|EEU66432.1| lysin [Enterococcus faecalis DS5]
gi|315034546|gb|EFT46478.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0027]
Length = 419
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 15/121 (12%)
Query: 96 ICSNGTGVSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL 153
+ + T V DK P + V+ + L IA +G YQK+ N ++NP+LI GQ L
Sbjct: 310 LLPDATVVPDKQPEATHVVQYGETLSSIAYQ-YGTY--YQKLAALNGLANPNLIYPGQVL 366
Query: 154 TIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
+ N VV + V+ G + + IA K GT TL LNG+ + + + G+
Sbjct: 367 KV----------NGSVVSKIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQT 416
Query: 214 L 214
L
Sbjct: 417 L 417
>gi|395205085|ref|ZP_10395877.1| Peptidoglycan-binding LysM [Propionibacterium humerusii P08]
gi|328906791|gb|EGG26562.1| Peptidoglycan-binding LysM [Propionibacterium humerusii P08]
Length = 1026
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 35/230 (15%)
Query: 2 GNFQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP-----PNKTTISEIQ 56
G+ + LV L+ +C A TL+ A A T A + L ++P P I
Sbjct: 52 GSVLVWLVSLIGWICWAWFTLAVA----AEAVTMASGRRLRLHMPGPRVVPRVAAGLLIA 107
Query: 57 SLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGT------GVSDKVPVY 110
+ SI A P + +V AQ P H ++ + G +
Sbjct: 108 AFAAAPAATSIAHAAEAP-----HVAVTAQV---APAHAATTHNSHGPHTPGAPKIWKTH 159
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVV 170
TV+ D L IA +G +++I EA+ I + +GQ L +P+P +N V
Sbjct: 160 TVRPGDYLWEIAEHYYGDGSHFRRIAEASGIDPHSELTVGQKLVLPVP------ENTAAV 213
Query: 171 HYAHVVEEGSSFALIAQKFGTDRDTLMKL---NGIHDDSKLIAGEPLDVP 217
H V+ G IA+ + D K+ +GI S L G+ L +P
Sbjct: 214 HS---VQAGEYLWEIAEHYYGDGSQFHKIAEASGIDAHSDLAVGQKLIIP 260
>gi|296140197|ref|YP_003647440.1| Curculin domain-containing protein (mannose-binding) lectin
[Tsukamurella paurometabola DSM 20162]
gi|296028331|gb|ADG79101.1| Curculin domain protein (mannose-binding) lectin [Tsukamurella
paurometabola DSM 20162]
Length = 190
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
+TV D L IA G +Y +I + NNI+NPDLI +GQ +TIP
Sbjct: 144 HTVASGDTLWAIAEQYLGDGNRYTEIAQLNNIANPDLINVGQVITIP 190
>gi|108756914|ref|YP_633621.1| LysM domain-containing protein [Myxococcus xanthus DK 1622]
gi|108460794|gb|ABF85979.1| LysM domain protein [Myxococcus xanthus DK 1622]
Length = 86
Score = 45.1 bits (105), Expect = 0.056, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLTIP 156
V+ + P +YTVK D L +A+ I+G + Y KI EAN + +PD I++GQ L +P
Sbjct: 22 VTHETPYGLYTVKSGDTLSKLAKDIYGDMKLYPKIFEANKDQLKDPDKIKVGQVLKLP 79
>gi|403738064|ref|ZP_10950792.1| hypothetical protein AUCHE_05_04750 [Austwickia chelonae NBRC
105200]
gi|403192176|dbj|GAB77562.1| hypothetical protein AUCHE_05_04750 [Austwickia chelonae NBRC
105200]
Length = 108
Score = 45.1 bits (105), Expect = 0.057, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 100 GTGVSDKVPV--YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
G + D + Y V + D L IA +G +Y +I E+N I+NPD+I +GQ L IP+
Sbjct: 49 GEDIGDAISAEQYVVSEGDTLWDIAERYYGDGSQYLRIAESNQIANPDMIYVGQVLAIPV 108
>gi|56750934|ref|YP_171635.1| peptidase [Synechococcus elongatus PCC 6301]
gi|81299409|ref|YP_399617.1| peptidoglycan-binding LysM [Synechococcus elongatus PCC 7942]
gi|56685893|dbj|BAD79115.1| putative peptidase [Synechococcus elongatus PCC 6301]
gi|81168290|gb|ABB56630.1| Peptidoglycan-binding LysM [Synechococcus elongatus PCC 7942]
Length = 590
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 97 CSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
S T +S + YTV+ D L IA T FG L Q +++ N +SNP+LI +GQ LTIP
Sbjct: 271 LSPATELSPEPQAYTVQPGDSLSRIA-TRFG--LDLQDLLQVNRLSNPNLIFVGQRLTIP 327
>gi|326200954|ref|ZP_08190826.1| Peptidoglycan-binding lysin domain [Clostridium papyrosolvens DSM
2782]
gi|325988522|gb|EGD49346.1| Peptidoglycan-binding lysin domain [Clostridium papyrosolvens DSM
2782]
Length = 320
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTI 155
G DKV YTVK D L I+ +G KY+KI EAN I NP++I +GQ + I
Sbjct: 265 GSGDKV--YTVKAGDTLGKISAKFYGNSSKYKKIYEANKNRIKNPNMIYVGQKIVI 318
>gi|406956933|gb|EKD84954.1| hypothetical protein ACD_38C00130G0006 [uncultured bacterium]
Length = 219
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
Y VK+ D L I+ +G + ++KI +ANNI NP+ I++G L IP
Sbjct: 172 YNVKEGDWLSSISGRAYGDIFAFEKIAKANNIQNPNQIEVGSVLIIP 218
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+TVK+ D L +A+ + K+ +I +ANN+ N DLI+ GQ L IP ++D ++
Sbjct: 84 HTVKEGDTLYILAQKYYNDGFKFSEIAKANNLKNVDLIEAGQVLDIP------ELDKTQI 137
Query: 170 VH 171
V
Sbjct: 138 VQ 139
>gi|308171908|ref|YP_003918613.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|384157628|ref|YP_005539701.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens TA208]
gi|384162421|ref|YP_005543800.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens LL3]
gi|384166642|ref|YP_005548020.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens XH7]
gi|307604772|emb|CBI41143.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|328551716|gb|AEB22208.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens TA208]
gi|328909976|gb|AEB61572.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens LL3]
gi|341825921|gb|AEK87172.1| spore peptidoglycan hydrolase [Bacillus amyloliquefaciens XH7]
Length = 426
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I EAN + NP+ + +GQ L IP+ + V +G + A IA +F
Sbjct: 21 IAEANKLPNPNTLVVGQTLVIPIEGQY------------YEVRQGDTLAAIAGRFHISAA 68
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
L ++NGI S + G L +P + I+++++
Sbjct: 69 ELARVNGIQLSSTVQVGTRLYIPEQTNKPDIESNAY 104
>gi|15639036|ref|NP_218482.1| hypothetical protein TP0042 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025276|ref|YP_001933048.1| hypothetical protein TPASS_0042 [Treponema pallidum subsp. pallidum
SS14]
gi|378972539|ref|YP_005221143.1| LysM domain-containing protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|378973605|ref|YP_005222211.1| LysM domain-containing protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|378974669|ref|YP_005223277.1| hypothetical protein TPADAL_0042 [Treponema pallidum subsp.
pallidum DAL-1]
gi|378981514|ref|YP_005229819.1| LysM domain-containing protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|384421591|ref|YP_005630950.1| putative LysM domain protein [Treponema pallidum subsp. pallidum
str. Chicago]
gi|408501946|ref|YP_006869390.1| hypothetical protein TPAMA_0042 [Treponema pallidum subsp. pallidum
str. Mexico A]
gi|3322297|gb|AAC65036.1| hypothetical protein TP_0042 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017851|gb|ACD70469.1| hypothetical protein TPASS_0042 [Treponema pallidum subsp. pallidum
SS14]
gi|291059457|gb|ADD72192.1| putative LysM domain protein [Treponema pallidum subsp. pallidum
str. Chicago]
gi|374676862|gb|AEZ57155.1| LysM domain protein [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|374677931|gb|AEZ58223.1| LysM domain protein [Treponema pallidum subsp. pertenue str. CDC2]
gi|374679000|gb|AEZ59291.1| LysM domain protein [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|374680067|gb|AEZ60357.1| hypothetical protein TPADAL_0042 [Treponema pallidum subsp.
pallidum DAL-1]
gi|408475309|gb|AFU66074.1| hypothetical protein TPAMA_0042 [Treponema pallidum subsp. pallidum
str. Mexico A]
Length = 310
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
+ +G+G S KV YTVK+ D L +AR+ + +Y +I E N + NPD I G ++ I
Sbjct: 249 VEESGSG-SVKVVRYTVKRGDTLWDLARSYYKTPWRYMRIAEFNRLKNPDHIVAGTSIEI 307
Query: 156 P 156
P
Sbjct: 308 P 308
>gi|414580664|ref|ZP_11437804.1| hypothetical protein MA5S1215_4222 [Mycobacterium abscessus
5S-1215]
gi|420880988|ref|ZP_15344355.1| hypothetical protein MA5S0304_4268 [Mycobacterium abscessus
5S-0304]
gi|420886791|ref|ZP_15350151.1| hypothetical protein MA5S0421_4503 [Mycobacterium abscessus
5S-0421]
gi|420891553|ref|ZP_15354900.1| hypothetical protein MA5S0422_5444 [Mycobacterium abscessus
5S-0422]
gi|420897506|ref|ZP_15360845.1| hypothetical protein MA5S0708_4196 [Mycobacterium abscessus
5S-0708]
gi|420901227|ref|ZP_15364558.1| hypothetical protein MA5S0817_3817 [Mycobacterium abscessus
5S-0817]
gi|420905868|ref|ZP_15369186.1| hypothetical protein MA5S1212_3953 [Mycobacterium abscessus
5S-1212]
gi|420974960|ref|ZP_15438150.1| hypothetical protein MA5S0921_5229 [Mycobacterium abscessus
5S-0921]
gi|392078813|gb|EIU04640.1| hypothetical protein MA5S0422_5444 [Mycobacterium abscessus
5S-0422]
gi|392082554|gb|EIU08380.1| hypothetical protein MA5S0421_4503 [Mycobacterium abscessus
5S-0421]
gi|392085897|gb|EIU11722.1| hypothetical protein MA5S0304_4268 [Mycobacterium abscessus
5S-0304]
gi|392096818|gb|EIU22613.1| hypothetical protein MA5S0708_4196 [Mycobacterium abscessus
5S-0708]
gi|392098588|gb|EIU24382.1| hypothetical protein MA5S0817_3817 [Mycobacterium abscessus
5S-0817]
gi|392103772|gb|EIU29558.1| hypothetical protein MA5S1212_3953 [Mycobacterium abscessus
5S-1212]
gi|392115816|gb|EIU41584.1| hypothetical protein MA5S1215_4222 [Mycobacterium abscessus
5S-1215]
gi|392160078|gb|EIU85771.1| hypothetical protein MA5S0921_5229 [Mycobacterium abscessus
5S-0921]
Length = 449
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L +A +G Y+ I A+ IS+P I +GQ L IP DV
Sbjct: 56 YTVAAGDTLSALALRFYGDAELYRLIAAASGISDPGAIGVGQRLVIP------DVTR--- 106
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRD---TLMKLNGIHDDSKLIAGEPL 214
+ V G + + +A +F D + + +NGI D + + AG L
Sbjct: 107 ----YTVAAGDTLSALALRFYGDAELYRLIAAVNGISDSAAVHAGRAL 150
>gi|290490598|dbj|BAI79286.1| LysM type receptor kinase [Lotus japonicus]
Length = 633
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
+N + K + VP+ C C+ ++ Y + D IA F L Q ++
Sbjct: 97 QNTTFETNKLVIVPVQCSCAGEYYQANTS--YAFQNTDTPFSIANNTFEGLTTCQALMHE 154
Query: 139 NNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDT 195
N+ NP + +G+ LT+PL C+C + K + Y +++V G S ++I++KFG +
Sbjct: 155 NH--NPGHLYLGRELTVPLRCACPTKNQTEKGIKYLLSYLVNWGDSISVISEKFGVSCNN 212
Query: 196 LMKLNGIH-DDSKLIAGEPLDVPL 218
++ N + +K+ L VPL
Sbjct: 213 TLEANSLSLTKAKIYPFTTLLVPL 236
>gi|400286845|ref|ZP_10788877.1| LysM domain/BON superfamily protein [Psychrobacter sp. PAMC 21119]
Length = 169
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIPLP 158
+YTVK D L IA+ ++G Y KI EAN +S+PD I GQ L IP P
Sbjct: 118 MYTVKSGDSLSKIAKDVYGSSGDYTKIFEANKPMLSDPDKIYPGQVLRIPKP 169
>gi|390435691|ref|ZP_10224229.1| LysM domain/BON superfamily protein [Pantoea agglomerans IG1]
Length = 145
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
T V DKV V YTVKK D L I++ ++G +Y KI EAN +S+PD I
Sbjct: 78 TKVEDKVTVTDSAAESELYTVKKGDTLSAISKQVYGNANEYNKIFEANKPMLSHPDKIYP 137
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 138 GQVLRIP 144
>gi|289548217|ref|YP_003473205.1| peptidase M23 [Thermocrinis albus DSM 14484]
gi|289181834|gb|ADC89078.1| Peptidase M23 [Thermocrinis albus DSM 14484]
Length = 419
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 110 YTVKKDDGLDFIARTI---FGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
+ V+K D L+ IAR + +Y K ++ N + ++GQ + IP+ +
Sbjct: 25 HKVRKGDTLESIAREYGVSLSDIKRYNKNLKENRL------KVGQQICIPVKTKAE---- 74
Query: 167 AKVVHYA-HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI 225
K YA + V++G + IAQKFG D L K NG+ + G+ L +P ++ +
Sbjct: 75 KKQGDYAIYRVKKGDTLEEIAQKFGVDVKELAKFNGLKSHV-IKEGQELKIPARSHGEKV 133
>gi|78062165|ref|YP_372073.1| peptidoglycan-binding LysM [Burkholderia sp. 383]
gi|77970050|gb|ABB11429.1| amino acid ABC transporter substrate-binding protein, PAAT family
[Burkholderia sp. 383]
Length = 377
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
Y VK D L+ IA + G +Y++I NN++NP+LI GQ+L IP+
Sbjct: 329 YVVKAGDTLNMIAASKLGSGQRYREIQRRNNLANPNLILAGQHLVIPV 376
>gi|372276407|ref|ZP_09512443.1| LysM domain/BON superfamily protein [Pantoea sp. SL1_M5]
Length = 145
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
T V DKV V YTVKK D L I++ ++G +Y KI EAN +S+PD I
Sbjct: 78 TKVEDKVTVTDSATESELYTVKKGDTLSAISKQVYGNANEYNKIFEANKPMLSHPDKIYP 137
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 138 GQVLRIP 144
>gi|194467915|ref|ZP_03073901.1| glycoside hydrolase family 25 [Lactobacillus reuteri 100-23]
gi|194452768|gb|EDX41666.1| glycoside hydrolase family 25 [Lactobacillus reuteri 100-23]
Length = 368
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
TG + Y V+ D L IA T FG + +V N+I+NP++I +GQ L +
Sbjct: 266 TGKASNENTYFVQSGDTLSGIA-TKFGTTVS--DLVSRNHIANPNVIYVGQKLYLAGNGQ 322
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ A+ V+ G + + IA KFG TL + NGI + + + G+ + +
Sbjct: 323 SN----------AYTVQRGDTLSGIAAKFGKTWQTLAQKNGIANPNVIYVGQTIQI 368
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 22/132 (16%)
Query: 83 VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS 142
+P KP++ H ++GT Y V+ D L IA +G YQ + N I
Sbjct: 206 IPEPKPVQHVGHP--ASGT--------YIVQPGDTLSGIAEK-YG--TTYQNLAAINGIG 252
Query: 143 NPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
NP++I +GQ L + S ++ + V+ G + + IA KFGT L+ N I
Sbjct: 253 NPNMINVGQVLKVTGKASNENT---------YFVQSGDTLSGIATKFGTTVSDLVSRNHI 303
Query: 203 HDDSKLIAGEPL 214
+ + + G+ L
Sbjct: 304 ANPNVIYVGQKL 315
>gi|322437260|ref|YP_004219472.1| peptidoglycan-binding lysin domain protein [Granulicella tundricola
MP5ACTX9]
gi|321164987|gb|ADW70692.1| Peptidoglycan-binding lysin domain protein [Granulicella tundricola
MP5ACTX9]
Length = 130
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
YT+ D L +++ +G Y+ I +A++I+NPD IQ+GQ +T+P+
Sbjct: 81 YTIAPGDNLSKVSKLFYGNANHYEGIAKASHIANPDKIQVGQKVTVPV 128
>gi|304315986|ref|YP_003851131.1| peptidoglycan-binding lysin domain [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777488|gb|ADL68047.1| Peptidoglycan-binding lysin domain [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 303
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 53 SEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTV 112
SEI ++ + I + PP P H C Y V
Sbjct: 110 SEIHQMYYTPPMTPIGEMYDMPPTAPTQ-------------HMPCPT---------YYVV 147
Query: 113 KKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL-------TIPLPCSCDDVD 165
+ D L I+ FG + +I+ AN +P++I GQ + T+P+P S +
Sbjct: 148 QPGDTLWSISNR-FG--ISLDEIIRANYFMDPNMIYPGQTIIIPCPSKTVPMPPSPPVYE 204
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN-GIHDDSKLIAGEPLDVPL 218
+ K +VV+ G + IA +F T D ++K N I + S + G+ + +P+
Sbjct: 205 HPKEGRMVYVVKPGDTLYTIAMRFNTTVDAILKANPDIQNPSLIYPGQRIIIPV 258
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK D L IA+ + + I+ NNI NP LI GQ L IP V
Sbjct: 8 YVVKSGDTLFSIAKKFNTSV---ESIISRNNIVNPSLIYPGQTLIIP------------V 52
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
+ V G + +I QKFG ++++ +N I + G+ L +P N ++++S
Sbjct: 53 TGVYYTVMPGDTVYIIGQKFGIPYESIIYVNNILYPYTIYPGQMLFIP--GANKLMQSES 110
>gi|444909595|ref|ZP_21229786.1| Peptidoglycan-binding LysM Polysaccharide deacetylase [Cystobacter
fuscus DSM 2262]
gi|444720544|gb|ELW61328.1| Peptidoglycan-binding LysM Polysaccharide deacetylase [Cystobacter
fuscus DSM 2262]
Length = 547
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP---- 156
TGVS+ Y V+ D L IA + + + ++N I NPD I GQ L +P
Sbjct: 2 TGVSN----YKVRSGDTLSAIAARYHTTVAE---LAKSNGIKNPDKIAAGQTLKVPDNFE 54
Query: 157 ------LPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
LP D A ++ V G + + IA+ T L K N I + ++ +
Sbjct: 55 SKPRASLPKDGDGAPQAPSRGGSYTVRAGDTLSDIAKNLHTTVSALAKANHIQNPDRISS 114
Query: 211 GEPLDVP 217
G+ L VP
Sbjct: 115 GQKLTVP 121
>gi|402568667|ref|YP_006618011.1| peptidoglycan-binding LysM [Burkholderia cepacia GG4]
gi|402249864|gb|AFQ50317.1| peptidoglycan-binding LysM [Burkholderia cepacia GG4]
Length = 377
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
Y VK D L+ IA + G +Y++I NN++NP+LI GQ+L IP+
Sbjct: 329 YVVKAGDTLNLIAASKLGSGQRYREIQRRNNLANPNLILAGQHLVIPV 376
>gi|269219434|ref|ZP_06163288.1| putative LysM domain protein [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211130|gb|EEZ77470.1| putative LysM domain protein [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 348
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y D L+ +A+ + I +AN ++ P ++ GQ L IP S + A +
Sbjct: 72 YRAASHDTLETVAKRTG---VSPTAIAQANELTGP--LRTGQRLKIP---SIPEAPKAPL 123
Query: 170 -----VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSS 224
+H V+ G + + IA++ GT + + NGI D +++ AG+ L +P A +S
Sbjct: 124 PAEPSSSLSHTVQRGDTLSGIARQHGTTVAAIAQANGIADPARIYAGKTLTIPGAATEAS 183
>gi|239826709|ref|YP_002949333.1| NLP/P60 protein [Geobacillus sp. WCH70]
gi|239807002|gb|ACS24067.1| NLP/P60 protein [Geobacillus sp. WCH70]
Length = 338
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 103 VSDKVPVYTVKKDDGLDFIAR---TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPC 159
V++ Y VK D L IA+ T LLK ISNP+ I+ GQ + +
Sbjct: 67 VNESEDTYVVKAGDTLSKIAKQFNTTVAALLKMNP-----EISNPNFIKAGQTIRLSGSA 121
Query: 160 SCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN-GIHDDSKLIAGEPLDV-- 216
S + Y ++V+EG +F+ IA+ F T +L+ LN I + + + AG+ + V
Sbjct: 122 SVPSTKESGASGY-YIVKEGDTFSGIAKMFHTTVRSLLALNPEITNPNFIRAGQSIKVAG 180
Query: 217 ---PLKACNSSIKADS 229
P ++ N I S
Sbjct: 181 EKAPAQSSNQKISKSS 196
>gi|319891408|ref|YP_004148283.1| Autolysin [Staphylococcus pseudintermedius HKU10-03]
gi|386320242|ref|YP_006016405.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus
pseudintermedius ED99]
gi|317161104|gb|ADV04647.1| Autolysin precursor [Staphylococcus pseudintermedius HKU10-03]
gi|323465413|gb|ADX77566.1| N-acetylmuramoyl-L-alanine amidase Sle1 [Staphylococcus
pseudintermedius ED99]
Length = 335
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VYTV+ D L IA +G YQ I++ N ++N LI GQ L + P + AK
Sbjct: 93 VYTVRYGDTLSGIAAR-YG--TTYQNIMKWNGLNN-FLILPGQKLNVSGPSTTPSRSTAK 148
Query: 169 V---------VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
Y + V+ G S +LIA K+GT +M+LNG+
Sbjct: 149 KPAPKTSSRNASY-YTVQPGDSLSLIASKYGTTYQHIMELNGL 190
>gi|357049495|ref|ZP_09110715.1| hypothetical protein HMPREF9478_00698 [Enterococcus saccharolyticus
30_1]
gi|355383338|gb|EHG30422.1| hypothetical protein HMPREF9478_00698 [Enterococcus saccharolyticus
30_1]
Length = 199
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA FG KIVEAN I+N +LI +G+ L +P
Sbjct: 32 YTVQSGDTLSTIAYNYFGTSEAVDKIVEANGITNKNLIYVGETLVLP 78
>gi|257868594|ref|ZP_05648247.1| peptidoglycan-binding protein LysM [Enterococcus gallinarum EG2]
gi|257802758|gb|EEV31580.1| peptidoglycan-binding protein LysM [Enterococcus gallinarum EG2]
Length = 199
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IA FG KIVEAN I+N +LI +G+ L +P
Sbjct: 32 YTVQSGDTLSTIAYNYFGTSEAVDKIVEANGITNKNLIYVGETLVLP 78
>gi|423390509|ref|ZP_17367735.1| hypothetical protein ICG_02357 [Bacillus cereus BAG1X1-3]
gi|401639075|gb|EJS56816.1| hypothetical protein ICG_02357 [Bacillus cereus BAG1X1-3]
Length = 265
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
P+ + I SN G + VYTV+K+D L+ I++ + Q + +ANN +N D I
Sbjct: 11 PLSAAMITIVSNPVGAAAST-VYTVQKNDTLEAISKQY---EVSVQSLKQANNKAN-DRI 65
Query: 148 QIGQNLTIPLPCSCDDV---DNAKV----VHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
IG+ LTIP + ++ +N+ V + V+ G + + I+Q++ ++ + N
Sbjct: 66 NIGERLTIPGSSAANEYVQKNNSTVSTNTYQAIYQVKSGDTLSSISQQYKVSIHSIKQNN 125
Query: 201 GIHDDSKLIAGEPLDV 216
+ D S++ G+ L +
Sbjct: 126 NV-DGSQIFVGQHLKI 140
>gi|339499648|ref|YP_004697683.1| peptidase M23 [Spirochaeta caldaria DSM 7334]
gi|338833997|gb|AEJ19175.1| Peptidase M23 [Spirochaeta caldaria DSM 7334]
Length = 281
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
Y++++E NNI+N I +GQ + IP ++V+ G + IA+ F
Sbjct: 64 YKELLEYNNITNASKIFVGQKIKIPESSDTQ----------MYIVKRGDTLFSIARTFSV 113
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
D + K+NG+ + S + G L +P +K D+
Sbjct: 114 SIDGIRKINGLTEKSIIKEGMSLKIPNGVKPVEMKQDTI 152
>gi|226357341|ref|YP_002787081.1| metalloendopeptidase [Deinococcus deserti VCD115]
gi|226319331|gb|ACO47327.1| putative metalloendopeptidase [Deinococcus deserti VCD115]
Length = 271
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
TG ++ VY VK D L IA G + K V + + N D +Q+G L +P
Sbjct: 10 TGAAEGATVYRVKPGDTLSAIA-VRAGVSMASIKAVNPS-LRNTDRLQLGHALRLP---- 63
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSK-LIAGEPLDVPLK 219
N +V H V+ G + +IA+K+G L++ N + + L AG L +P +
Sbjct: 64 -----NRQVAARTHTVKGGQNLTVIARKYGLSLSQLLRANPKYAGGQPLWAGAKLTIPAR 118
>gi|304395474|ref|ZP_07377357.1| Peptidoglycan-binding lysin domain protein [Pantoea sp. aB]
gi|440759479|ref|ZP_20938616.1| hypothetical protein F385_2506 [Pantoea agglomerans 299R]
gi|304356768|gb|EFM21132.1| Peptidoglycan-binding lysin domain protein [Pantoea sp. aB]
gi|436426797|gb|ELP24497.1| hypothetical protein F385_2506 [Pantoea agglomerans 299R]
Length = 145
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
T V DKV V YTVKK D L I++ ++G +Y KI EAN +S+PD I
Sbjct: 78 TKVEDKVTVTDTAVESELYTVKKGDTLSAISKQVYGNANEYNKIFEANKPMLSHPDKIYP 137
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 138 GQVLRIP 144
>gi|258514523|ref|YP_003190745.1| Peptidoglycan-binding LysM [Desulfotomaculum acetoxidans DSM 771]
gi|257778228|gb|ACV62122.1| Peptidoglycan-binding LysM [Desulfotomaculum acetoxidans DSM 771]
Length = 179
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 36/156 (23%)
Query: 97 CSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI----QIGQN 152
C+ GT VYT++ D L +A ++ VEA +NP ++ QIGQ
Sbjct: 13 CTGGT-------VYTIRPGDSLLSLAS-------RFNTTVEAITNANPGIVPTNLQIGQQ 58
Query: 153 LTIPL---PCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI 209
+ IP+ P C + + ++ G +F +A +FG D+L+ N D +KL
Sbjct: 59 ICIPVKPVPGKCQG-------GFLYSIKPGDTFYNLANRFGIAVDSLIAANPGVDFNKLA 111
Query: 210 AGEPLDVP-----LKACNSSIKA---DSFDNYLRVA 237
G+ + +P C S A S D Y R+A
Sbjct: 112 VGQEICIPSTPPTPTKCPSGTFAYTIQSGDTYFRLA 147
>gi|403386535|ref|ZP_10928592.1| phage protein [Clostridium sp. JC122]
Length = 219
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
KV YTV D L I++ G +Y++I + NNISNP+LI +GQ L +P
Sbjct: 169 KVKTYTVVNGDTLWHISKKFLGDGNRYKEIAKLNNISNPNLIYVGQVLKLP 219
>gi|20807784|ref|NP_622955.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
MB4]
gi|20516340|gb|AAM24559.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
MB4]
Length = 185
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNA 167
+YTV+ D L IA +FG L +++AN IS+P+LI GQ + IP C
Sbjct: 81 IYTVRPGDSLWSIA-NMFGVSLD--CLIKANPQISDPNLIYPGQQICIPFYCPPPSPQTC 137
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI 209
+ ++ A + G S IA FG + L+K N D LI
Sbjct: 138 RTIYTA---KAGDSLWSIANMFGVSLEALIKANPQIPDPNLI 176
>gi|410454770|ref|ZP_11308679.1| glycoside hydrolase family protein [Bacillus bataviensis LMG 21833]
gi|409930032|gb|EKN67058.1| glycoside hydrolase family protein [Bacillus bataviensis LMG 21833]
Length = 428
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
++ +K ++ L IART + Q I+EAN + NP+ + +GQ++ IP
Sbjct: 3 IHVIKSNETLTTIARTYHTTV---QDIMEANELPNPNNLVVGQSIVIP------------ 47
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ + + V+ G + + I +K G L K+N I + L G L +P
Sbjct: 48 IIGHFYFVQSGDTLSSIGRKVGVPYQELAKINRISVNQPLNVGLRLYIP 96
>gi|118586314|ref|ZP_01543767.1| hypothetical protein, LysM-repeat domain [Oenococcus oeni ATCC
BAA-1163]
gi|118433240|gb|EAV39953.1| hypothetical protein, LysM-repeat domain [Oenococcus oeni ATCC
BAA-1163]
Length = 256
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L IA+ +G + I ANNISNPD I +G+ LTI S ++
Sbjct: 80 YTVASGDTLTSIAKA-YGTTV--SAIATANNISNPDYIYVGEVLTIGSSTSTSTSTSSTS 136
Query: 170 VHY------AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
++ V G + IA+ +GT + N I + + GE L +
Sbjct: 137 SSSTSSSSKSYTVASGDTLTSIAKAYGTTVSAIATANNISNPDYIYVGEVLTI 189
>gi|427394138|ref|ZP_18887640.1| hypothetical protein HMPREF9698_01275, partial [Alloiococcus otitis
ATCC 51267]
gi|425730126|gb|EKU92969.1| hypothetical protein HMPREF9698_01275, partial [Alloiococcus otitis
ATCC 51267]
Length = 278
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCD-DVDNAK 168
YTV+ D L IAR L ++V N + NP+ + +GQ L + L V K
Sbjct: 174 YTVRPGDTLSAIARRYN---LSVNQLVAWNKLENPNHLSVGQTLVLNLRTDAKTSVKPQK 230
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGE 212
+ V+ G + IA++ GT L LNG+ D L+ E
Sbjct: 231 ANRSTYTVKAGDTLYHIARQHGTSVANLKALNGLTSDLILVGQE 274
>gi|383763631|ref|YP_005442613.1| hypothetical protein CLDAP_26760 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383899|dbj|BAM00716.1| hypothetical protein CLDAP_26760 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 463
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDD-VDNAK 168
YTV D L IA +G L +Q I ANN+ DL+ IGQ L +P P V+ A
Sbjct: 208 YTVAPGDTLWGIA-VRYG--LDWQDIAIANNLKENDLLWIGQVLRLPSPGGVGGPVETAS 264
Query: 169 VV--HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V + V G + I ++G L +NG+ + L G+ L +P
Sbjct: 265 VAPGQQRYTVVAGDTLISIGLRYGVAWQELAAVNGLREFDLLQIGQELILP 315
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCS----CDDVDNAKV-----VHYAHVVEEGSSFA 183
Q ++ AN +S D++QIGQ L IP S NA V + V G +
Sbjct: 370 QALLRANALSERDILQIGQVLVIPEVESENPPVGSTGNAPVTQSTSTQRTYTVRAGDTVF 429
Query: 184 LIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
IA + G + ++++N + + S L G+ L VP
Sbjct: 430 AIAMRLGVNWQEMLRVNQLTEHSLLQPGQVLIVP 463
>gi|443474517|ref|ZP_21064492.1| Peptidoglycan-binding lysin domain protein [Pseudanabaena biceps
PCC 7429]
gi|443020775|gb|ELS34696.1| Peptidoglycan-binding lysin domain protein [Pseudanabaena biceps
PCC 7429]
Length = 386
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
Y VK D L IA+ G +++I NNI+NP +QIGQ LTIP S
Sbjct: 4 YIVKAGDTLSAIAKRFLGVNGDWREIARINNITNPASLQIGQRLTIPTTSS 54
>gi|239616724|ref|YP_002940046.1| Peptidase M23 [Kosmotoga olearia TBF 19.5.1]
gi|239505555|gb|ACR79042.1| Peptidase M23 [Kosmotoga olearia TBF 19.5.1]
Length = 286
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+ D L IAR + I++ N+I NP L+++G+ L IP P
Sbjct: 26 YEVQPGDTLYEIARRFDVHI---STILDFNDIENPRLLRVGEQLIIPQPDGL-------- 74
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
+ V++G + IA+ F T + L+K N + DS + G+ + +P N
Sbjct: 75 ---LYEVKKGDTLTYIAKLFFTPLEPLLKANNLTRDSWVFPGQKIFIPASIIN 124
>gi|167037559|ref|YP_001665137.1| peptidoglycan-binding LysM [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115974|ref|YP_004186133.1| spore coat assembly protein SafA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856393|gb|ABY94801.1| Peptidoglycan-binding LysM [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319929065|gb|ADV79750.1| spore coat assembly protein SafA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 142
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTV+ D + IA +FG + ++ AN IS+P+LI GQ + IP C + K
Sbjct: 35 YTVQPGDTMWSIAN-MFG--ISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETCK 91
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI-AGEPLDVPLKAC 221
+ + V+ G + IA FG D L++ N D LI G+ + +P C
Sbjct: 92 TI---YTVKPGDTMWSIANMFGVSLDALIRANPQIPDPNLIYPGQQICIPSANC 142
>gi|345017645|ref|YP_004819998.1| spore coat assembly protein SafA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032988|gb|AEM78714.1| spore coat assembly protein SafA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 140
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTV+ D + IA +FG + ++ AN IS+P+LI GQ + IP C + K
Sbjct: 35 YTVQPGDSMWSIAN-MFG--ISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVSPETCK 91
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI 209
+ + V+ G S IA FG D L++ N D LI
Sbjct: 92 TI---YTVKPGDSMWSIANMFGVSLDALIRANPQIPDPNLI 129
>gi|239503329|ref|ZP_04662639.1| LysM domain protein [Acinetobacter baumannii AB900]
gi|421677699|ref|ZP_16117590.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC111]
gi|410393035|gb|EKP45390.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC111]
Length = 1071
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|421624906|ref|ZP_16065766.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC098]
gi|408700099|gb|EKL45563.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC098]
Length = 1071
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|421674488|ref|ZP_16114419.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC065]
gi|421692927|ref|ZP_16132576.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-116]
gi|404559190|gb|EKA64455.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-116]
gi|410384337|gb|EKP36849.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC065]
Length = 1071
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|417547002|ref|ZP_12198088.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC032]
gi|421669615|ref|ZP_16109634.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC099]
gi|400384890|gb|EJP43568.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC032]
gi|410388000|gb|EKP40440.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC099]
Length = 1071
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|424843743|ref|ZP_18268368.1| LysM domain-containing protein [Saprospira grandis DSM 2844]
gi|395321941|gb|EJF54862.1| LysM domain-containing protein [Saprospira grandis DSM 2844]
Length = 181
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
V VYTVK D +AR +G+ +Y++++EAN ++ ++++GQ LTIP
Sbjct: 130 VYVYTVKAGDSPIRLARFFYGRDEEYKRLLEANELALDAMLKVGQQLTIP 179
>gi|357487233|ref|XP_003613904.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]
gi|355515239|gb|AES96862.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]
Length = 660
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 38 CQALVGY--LPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHC 95
CQ V Y PPN ++ I LF L ++ + +P + +P Q P+ +P+ C
Sbjct: 51 CQTYVYYKATPPNYLDLATISDLF---QLSRLMISKPSNISSPSSPLLPNQ-PLLIPLTC 106
Query: 96 ICS--NGT--GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI---- 147
C+ N T +S YT+K +D ++ F L Y + + NP+L+
Sbjct: 107 SCNFINTTFGSISYSNITYTIKPNDTFFLVSTINFQNLTTYPSV----QVVNPNLVATNL 162
Query: 148 QIGQNLTIPLPCSC-DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
IG N P+ C C D ++VV+ + + IA FGT +++ +NG
Sbjct: 163 SIGDNAVFPIFCKCPDKTKTNSSFMISYVVQPHDNVSSIASMFGTSEKSIVDVNG 217
>gi|332875094|ref|ZP_08442930.1| LysM domain protein [Acinetobacter baumannii 6014059]
gi|417567926|ref|ZP_12218792.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC189]
gi|417578505|ref|ZP_12229338.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-17]
gi|417872817|ref|ZP_12517707.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ABNIH2]
gi|421630874|ref|ZP_16071571.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC180]
gi|424053145|ref|ZP_17790677.1| hypothetical protein W9G_01834 [Acinetobacter baumannii Ab11111]
gi|425754870|ref|ZP_18872703.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-113]
gi|332736711|gb|EGJ67702.1| LysM domain protein [Acinetobacter baumannii 6014059]
gi|342233051|gb|EGT97805.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ABNIH2]
gi|395558250|gb|EJG24247.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC189]
gi|395567643|gb|EJG28317.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-17]
gi|404670675|gb|EKB38561.1| hypothetical protein W9G_01834 [Acinetobacter baumannii Ab11111]
gi|408696647|gb|EKL42179.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC180]
gi|425495813|gb|EKU61982.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-113]
Length = 1068
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 776 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 832
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 833 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 878
>gi|256752037|ref|ZP_05492905.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256749047|gb|EEU62083.1| spore coat assembly protein SafA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 142
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTV+ D + IA +FG + ++ AN IS+P+LI GQ + IP C + K
Sbjct: 35 YTVQPGDSMWSIAN-MFG--ISLDCLIRANPQISDPNLIYPGQQICIPFYCPPVAPETCK 91
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI-AGEPLDVPLKAC 221
+ + V+ G + IA FG D L++ N D LI G+ + +P C
Sbjct: 92 TI---YTVKPGDTMWSIANMFGVSLDALIRANPQIPDPNLIYPGQQICIPSANC 142
>gi|94309862|ref|YP_583072.1| LysM domain/BON superfamily protein [Cupriavidus metallidurans
CH34]
gi|93353714|gb|ABF07803.1| putative peptidoglycan binding protein containing LysM domain
[Cupriavidus metallidurans CH34]
Length = 166
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 81 FSVPAQKPIKVPIHCICSNGTGV------------SDKVPVYTVKKDDGLDFIARTIFGQ 128
F V A + + I C N GV SD+ +TV K D L I++ +G
Sbjct: 75 FGVAADQATREKIILCCGNVEGVDSVEDKMSVNVESDESQWHTVVKGDTLWAISQAAYGN 134
Query: 129 LLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+Y KI EAN +SNPD I GQ L IP
Sbjct: 135 GAEYNKIFEANKPMLSNPDKIYPGQKLRIP 164
>gi|29376513|ref|NP_815667.1| endolysin [Enterococcus faecalis V583]
gi|256964737|ref|ZP_05568908.1| phage lysin [Enterococcus faecalis HIP11704]
gi|307272816|ref|ZP_07554063.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0855]
gi|307295892|ref|ZP_07575724.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0411]
gi|422713301|ref|ZP_16770054.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0309A]
gi|422717163|ref|ZP_16773853.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0309B]
gi|424672827|ref|ZP_18109770.1| glycosyl hydrolase family 25 [Enterococcus faecalis 599]
gi|29343977|gb|AAO81737.1| endolysin [Enterococcus faecalis V583]
gi|256955233|gb|EEU71865.1| phage lysin [Enterococcus faecalis HIP11704]
gi|306496223|gb|EFM65802.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0411]
gi|306510430|gb|EFM79453.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0855]
gi|315574538|gb|EFU86729.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0309B]
gi|315581820|gb|EFU94011.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0309A]
gi|402353333|gb|EJU88165.1| glycosyl hydrolase family 25 [Enterococcus faecalis 599]
Length = 413
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ++ N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 339 YQRLAALNGLTNPNLIYPGQILKV----------NGSVVSNIYTVQYGDNLSSIAAKLGT 388
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + +G+ L
Sbjct: 389 TYQTLAALNGLANPNLIYSGQTL 411
>gi|403674996|ref|ZP_10937199.1| LysM domain protein [Acinetobacter sp. NCTC 10304]
Length = 1071
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|290490578|dbj|BAI79276.1| LysM type receptor kinase [Lotus japonicus]
Length = 633
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
+N + K + VP+ C C+ ++ Y + D IA F L Q ++
Sbjct: 97 QNTTFETNKLVIVPVQCSCAGEYYQANTS--YAFQNTDTPFSIANNTFEGLTTCQALMHE 154
Query: 139 NNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDT 195
N+ NP + +G+ LT+PL C+C + K + Y +++V G S ++I++KFG +
Sbjct: 155 NH--NPGHLYLGRELTVPLRCACPTKNQTEKGIKYLLSYLVNWGDSVSVISEKFGVSCNN 212
Query: 196 LMKLNGIH-DDSKLIAGEPLDVPL 218
++ N + +K+ L VPL
Sbjct: 213 TLEANSLSLTKAKIYPFTTLLVPL 236
>gi|189219423|ref|YP_001940064.1| glycosyl hydrolase [Methylacidiphilum infernorum V4]
gi|189186281|gb|ACD83466.1| Predicted glycosyl hydrolase [Methylacidiphilum infernorum V4]
Length = 235
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 57 SLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDD 116
S+F +K LGA+ PG + VP + + + + G +YTV++ D
Sbjct: 120 SIFEIKKYNPNLGAS-LVPG--QKLLVPVIEKEQEDVSALLKEAEGKR----IYTVRQGD 172
Query: 117 GLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLP 158
L IAR L ++IV+AN I +P ++IGQ+L IP P
Sbjct: 173 SLWKIARRFH---LSVKEIVDANQIKDPTKLKIGQDLIIPYP 211
>gi|430805937|ref|ZP_19433052.1| LysM domain/BON superfamily protein [Cupriavidus sp. HMR-1]
gi|429501765|gb|ELA00092.1| LysM domain/BON superfamily protein [Cupriavidus sp. HMR-1]
Length = 166
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 81 FSVPAQKPIKVPIHCICSNGTGV------------SDKVPVYTVKKDDGLDFIARTIFGQ 128
F V A + + I C N GV SD+ +TV K D L I++ +G
Sbjct: 75 FGVAADQATREKIILCCGNVEGVDSVEDKMSVNVESDESQWHTVVKGDTLWAISQAAYGN 134
Query: 129 LLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+Y KI EAN +SNPD I GQ L IP
Sbjct: 135 GAEYNKIFEANKPMLSNPDKIYPGQKLRIP 164
>gi|420266685|ref|ZP_14769133.1| Phage lysin, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394424869|gb|EJE97926.1| Phage lysin, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 203
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA + Y K+ NNI +P I +G+ L + V +
Sbjct: 106 YTVKLGDTLSKIAASYN---TTYTKLATLNNIKSPYTIYVGEKLKV-----SGFVTTSSK 157
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V+Y V++G + ++I++ +GT ++ LNG+ + + + G+ L V
Sbjct: 158 VYYT--VKKGDTLSVISKNYGTTVASIKTLNGLKNVNYIYVGQSLRVK 203
>gi|440231299|ref|YP_007345092.1| putative phospholipid-binding protein,LysM domain-containing
protein [Serratia marcescens FGI94]
gi|440053004|gb|AGB82907.1| putative phospholipid-binding protein,LysM domain-containing
protein [Serratia marcescens FGI94]
Length = 148
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
+GV D + V YTVKK D L I++ ++G +Y KI EAN +S+PD I
Sbjct: 81 SGVEDHITVAQAAGESTFYTVKKGDTLSAISKEVYGDANQYNKIFEANKPMLSSPDKIYP 140
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 141 GQVLRIP 147
>gi|421666899|ref|ZP_16106981.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC087]
gi|410386371|gb|EKP38842.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC087]
Length = 1071
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|421651191|ref|ZP_16091562.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC0162]
gi|408508593|gb|EKK10274.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC0162]
Length = 1071
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK + L+ IA + + +++ E N + +Q GQN+ IP V
Sbjct: 977 YTVKAGESLNAIASRVG---ISVRELAEMNALKANANLQRGQNIVIP----------KTV 1023
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V Y V+ G + +A K+G + L +LN + ++L G+ + VP
Sbjct: 1024 VEYK--VKRGDTLIGLASKYGLETTLLAELNNLTPSTQLRIGDIIKVP 1069
>gi|260557364|ref|ZP_05829579.1| soluble lytic murein transglycosylase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|260408990|gb|EEX02293.1| soluble lytic murein transglycosylase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|452947141|gb|EME52631.1| lytic murein transglycosylase [Acinetobacter baumannii MSP4-16]
Length = 1071
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|425749485|ref|ZP_18867462.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-348]
gi|445456343|ref|ZP_21445789.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC047]
gi|425488831|gb|EKU55156.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-348]
gi|444778289|gb|ELX02307.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC047]
Length = 1071
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK + L+ IA + + +++ E N + +Q GQN+ IP V
Sbjct: 977 YTVKAGESLNAIASRVG---ISVRELAEMNALKANANLQRGQNIVIP----------KTV 1023
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V Y V+ G + +A K+G + L +LN + ++L G+ + VP
Sbjct: 1024 VEYK--VKRGDTLIGLASKYGLETTLLAELNNLTPSTQLRIGDIIKVP 1069
>gi|424060618|ref|ZP_17798109.1| hypothetical protein W9K_01732 [Acinetobacter baumannii Ab33333]
gi|404668570|gb|EKB36479.1| hypothetical protein W9K_01732 [Acinetobacter baumannii Ab33333]
Length = 1071
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|421661292|ref|ZP_16101468.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC110]
gi|421696141|ref|ZP_16135731.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-692]
gi|404563077|gb|EKA68288.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-692]
gi|408715704|gb|EKL60826.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC110]
Length = 1071
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|184157415|ref|YP_001845754.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ACICU]
gi|384131075|ref|YP_005513687.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
1656-2]
gi|384142490|ref|YP_005525200.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
MDR-ZJ06]
gi|385236817|ref|YP_005798156.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
TCDC-AB0715]
gi|387124632|ref|YP_006290514.1| lytic murein transglycosylase [Acinetobacter baumannii MDR-TJ]
gi|407932157|ref|YP_006847800.1| lytic murein transglycosylase [Acinetobacter baumannii TYTH-1]
gi|416149171|ref|ZP_11602732.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
AB210]
gi|417869350|ref|ZP_12514341.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ABNIH1]
gi|417877391|ref|ZP_12522105.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ABNIH3]
gi|417883513|ref|ZP_12527750.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ABNIH4]
gi|421203373|ref|ZP_15660513.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
AC12]
gi|421536200|ref|ZP_15982450.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
AC30]
gi|421686490|ref|ZP_16126242.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-143]
gi|421702939|ref|ZP_16142410.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ZWS1122]
gi|421709192|ref|ZP_16148554.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ZWS1219]
gi|421790515|ref|ZP_16226720.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-2]
gi|445468925|ref|ZP_21450988.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC338]
gi|445483181|ref|ZP_21456384.1| transglycosylase SLT domain / LysM domain multi-domain protein
[Acinetobacter baumannii Naval-78]
gi|183209009|gb|ACC56407.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ACICU]
gi|322507295|gb|ADX02749.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
1656-2]
gi|323517314|gb|ADX91695.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
TCDC-AB0715]
gi|333364587|gb|EGK46601.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
AB210]
gi|342230913|gb|EGT95735.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ABNIH1]
gi|342235719|gb|EGU00297.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ABNIH4]
gi|342235811|gb|EGU00375.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ABNIH3]
gi|347592983|gb|AEP05704.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
MDR-ZJ06]
gi|385879124|gb|AFI96219.1| soluble lytic murein transglycosylase-like protein [Acinetobacter
baumannii MDR-TJ]
gi|398327121|gb|EJN43259.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
AC12]
gi|404568200|gb|EKA73305.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-143]
gi|407188483|gb|EKE59729.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ZWS1219]
gi|407193315|gb|EKE64482.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
ZWS1122]
gi|407900738|gb|AFU37569.1| lytic murein transglycosylase [Acinetobacter baumannii TYTH-1]
gi|409985867|gb|EKO42070.1| soluble lytic murein transglycosylase [Acinetobacter baumannii
AC30]
gi|410406068|gb|EKP58093.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-2]
gi|444768878|gb|ELW93083.1| transglycosylase SLT domain / LysM domain multi-domain protein
[Acinetobacter baumannii Naval-78]
gi|444774566|gb|ELW98643.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC338]
Length = 1071
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|421807580|ref|ZP_16243440.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC035]
gi|445486967|ref|ZP_21457588.1| transglycosylase SLT domain protein [Acinetobacter baumannii
AA-014]
gi|410416561|gb|EKP68333.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC035]
gi|444769194|gb|ELW93391.1| transglycosylase SLT domain protein [Acinetobacter baumannii
AA-014]
Length = 1071
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|424064514|ref|ZP_17801999.1| hypothetical protein W9M_01797 [Acinetobacter baumannii Ab44444]
gi|404673250|gb|EKB41049.1| hypothetical protein W9M_01797 [Acinetobacter baumannii Ab44444]
Length = 1071
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|417551269|ref|ZP_12202347.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-18]
gi|417565537|ref|ZP_12216411.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC143]
gi|395557293|gb|EJG23294.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC143]
gi|400385724|gb|EJP48799.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-18]
Length = 1071
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L+ IA + +++ E N + +Q GQN+ IP V
Sbjct: 977 YTVKAGDSLNAIASRAG---ISVRELAEMNALKANANLQRGQNIVIP----------KTV 1023
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V Y V+ G + +A K+G + L +LN + ++L G+ + VP
Sbjct: 1024 VEYK--VKRGDTLIGLASKYGLETTLLAELNNLTPSTQLRIGDIIKVP 1069
>gi|296132169|ref|YP_003639416.1| peptidoglycan-binding lysin domain-containing protein [Thermincola
potens JR]
gi|296030747|gb|ADG81515.1| Peptidoglycan-binding lysin domain protein [Thermincola potens JR]
Length = 176
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YT+K D IAR L ++ AN + D + +GQ + IP+P C D
Sbjct: 74 YTIKPGDTFYSIARRYNISL---DDLLAANPGVDSDRLLVGQVICIPVPTECPDGTRP-- 128
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+ + G +F IA +FG D L+ N D L GE + VP +
Sbjct: 129 ----YKIRRGDTFYSIAVRFGISLDALLAANPGVDPDALQVGEQICVPRR 174
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQ----KIVEANNISNPDLIQIGQNLTIPL-----PCS 160
Y +K D T + L+Y ++ AN NP+ +QIGQ + +P+ PC
Sbjct: 17 YIIKAGD-------TYYSIALRYNTSVPALIAANPGVNPNFLQIGQTICVPVRPQLPPCP 69
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ + ++ G +F IA+++ D L+ N D +L+ G+ + +P+
Sbjct: 70 GGNY---------YTIKPGDTFYSIARRYNISLDDLLAANPGVDSDRLLVGQVICIPV 118
>gi|169796678|ref|YP_001714471.1| bifunctional lytic murein transglycosylase C, membrane-bound
(MtlD)/cell wall hydrolase [Acinetobacter baumannii AYE]
gi|213156098|ref|YP_002318518.1| lytic transglycosylase [Acinetobacter baumannii AB0057]
gi|215484166|ref|YP_002326391.1| LysM domain protein [Acinetobacter baumannii AB307-0294]
gi|301344774|ref|ZP_07225515.1| LysM domain protein [Acinetobacter baumannii AB056]
gi|301510947|ref|ZP_07236184.1| LysM domain protein [Acinetobacter baumannii AB058]
gi|301595380|ref|ZP_07240388.1| LysM domain protein [Acinetobacter baumannii AB059]
gi|332852351|ref|ZP_08434136.1| LysM domain protein [Acinetobacter baumannii 6013150]
gi|332870149|ref|ZP_08439061.1| LysM domain protein [Acinetobacter baumannii 6013113]
gi|417574276|ref|ZP_12225130.1| transglycosylase SLT domain protein [Acinetobacter baumannii Canada
BC-5]
gi|421622729|ref|ZP_16063627.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC074]
gi|421643591|ref|ZP_16084085.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-235]
gi|421646204|ref|ZP_16086656.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-251]
gi|421660501|ref|ZP_16100691.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-83]
gi|421700224|ref|ZP_16139741.1| transglycosylase SLT domain protein [Acinetobacter baumannii IS-58]
gi|421795914|ref|ZP_16231988.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-21]
gi|421801839|ref|ZP_16237796.1| transglycosylase SLT domain protein [Acinetobacter baumannii Canada
BC1]
gi|445401054|ref|ZP_21430355.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-57]
gi|445451868|ref|ZP_21444861.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-A-92]
gi|169149605|emb|CAM87495.1| putative bifunctional protein [Includes: lytic murein
transglycosylase C, membrane-bound (MtlD); cell wall
hydrolase] [Acinetobacter baumannii AYE]
gi|213055258|gb|ACJ40160.1| lytic transglycosylase [Acinetobacter baumannii AB0057]
gi|213988759|gb|ACJ59058.1| LysM domain protein [Acinetobacter baumannii AB307-0294]
gi|332729294|gb|EGJ60635.1| LysM domain protein [Acinetobacter baumannii 6013150]
gi|332732416|gb|EGJ63672.1| LysM domain protein [Acinetobacter baumannii 6013113]
gi|400209844|gb|EJO40814.1| transglycosylase SLT domain protein [Acinetobacter baumannii Canada
BC-5]
gi|404570606|gb|EKA75679.1| transglycosylase SLT domain protein [Acinetobacter baumannii IS-58]
gi|408508274|gb|EKK09960.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-235]
gi|408517591|gb|EKK19129.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-251]
gi|408694563|gb|EKL40133.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC074]
gi|408704286|gb|EKL49657.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-83]
gi|410400741|gb|EKP52908.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-21]
gi|410405096|gb|EKP57149.1| transglycosylase SLT domain protein [Acinetobacter baumannii Canada
BC1]
gi|444754911|gb|ELW79516.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-A-92]
gi|444783181|gb|ELX07043.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-57]
Length = 1071
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|421789663|ref|ZP_16225912.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-82]
gi|410397902|gb|EKP50139.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-82]
Length = 1071
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L+ IA + +++ E N + +Q GQN+ IP V
Sbjct: 977 YTVKAGDSLNAIASRAG---ISVRELAEMNALKANANLQRGQNIVIP----------KTV 1023
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V Y V+ G + +A K+G + L +LN + ++L G+ + VP
Sbjct: 1024 VEYK--VKRGDTLIGLASKYGLETTLLAELNNLTPSTQLRIGDIIKVP 1069
>gi|392980682|ref|YP_006479270.1| LysM domain/BON superfamily protein [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392326615|gb|AFM61568.1| LysM domain/BON superfamily protein [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 146
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
T D+ YTVK D L I++T++G +Y KI EAN + +PD I GQ L IP
Sbjct: 87 TDAKDEATYYTVKSGDTLSAISKTVYGDANQYNKIFEANRPMLFSPDKIYPGQTLRIP 144
>gi|312171546|emb|CBX79804.1| Uncharacterized protein ygaU [Erwinia amylovora ATCC BAA-2158]
Length = 147
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I+++++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 98 YTVKSGDTLSAISQSVYGDASQYNKIFEANKPMLSHPDKIYPGQKLRIP 146
>gi|408356326|ref|YP_006844857.1| hypothetical protein AXY_09630 [Amphibacillus xylanus NBRC 15112]
gi|407727097|dbj|BAM47095.1| hypothetical protein AXY_09630 [Amphibacillus xylanus NBRC 15112]
Length = 538
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP-------LPCSCD 162
+TV+ D L +A+ +G + I EANN+S+ DL+++GQ L IP P +
Sbjct: 153 HTVQTGDYLSVLAKR-YG--VTVDSIKEANNLSS-DLVRLGQKLIIPTLVNDTAAPAQTE 208
Query: 163 DVDNAKVVHYA------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ + + V G S LIAQKFGT D + N + D L G+ L +
Sbjct: 209 QIQQPEQAEQTEQKATTYTVVSGDSLFLIAQKFGTTIDAIKSANKL-DSVVLQIGQKLTI 267
Query: 217 P 217
P
Sbjct: 268 P 268
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEA---NNISNPDLIQIGQNLTIPLPCSCD---D 163
YTVK D L IA+ ++ V A NN N DLI++GQ L I + +
Sbjct: 287 YTVKAGDTLSAIAK-------RFNVTVSALKSNNNLNSDLIRVGQVLIIADEQTGETQQQ 339
Query: 164 VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC-N 222
+ KV + H V G + ++ ++G + L+++N + S L G+ L VP+
Sbjct: 340 TEEKKVTYTTHTVVSGDNIWNLSIQYGIPQKELLEVNNLTTRSMLSIGQQLKVPVHHIPV 399
Query: 223 SSIKADSFDNYLR-VANGTYTFTANSCVKC 251
S+ ++ YL Y FT K
Sbjct: 400 KSVVSEKHGEYLDWWTEAQYLFTIGKTAKV 429
>gi|193076773|gb|ABO11487.2| hypothetical protein A1S_1055 [Acinetobacter baumannii ATCC 17978]
Length = 1071
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|402571360|ref|YP_006620703.1| glycosyl hydrolase [Desulfosporosinus meridiei DSM 13257]
gi|402252557|gb|AFQ42832.1| putative glycosyl hydrolase [Desulfosporosinus meridiei DSM 13257]
Length = 427
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
++ VK D L +AR +G + Q+IV+AN IS+P + +GQ IP+
Sbjct: 3 IHVVKPGDTLSKVARA-YG--ISAQEIVDANQISDPSRLVVGQTFVIPIRGRY------- 52
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
H ++ G S I+ ++ + L+++N I + + L G L +P +
Sbjct: 53 -----HFLQPGESLWSISHQYNVSVEELVRINNIQNPNNLPVGLRLYLPQR 98
>gi|239825601|ref|YP_002948225.1| glycoside hydrolase family protein [Geobacillus sp. WCH70]
gi|239805894|gb|ACS22959.1| glycoside hydrolase family 18 [Geobacillus sp. WCH70]
Length = 428
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
++I+ AN + NP+ + +GQ + IP+ S + V+ G S I++KF
Sbjct: 24 EEIIRANELPNPNDLVVGQAIVIPIVGSF------------YWVQRGDSLWSISRKFSIP 71
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTFTANSCVKCQ 252
L ++N I +S L G+ L +P KA + F+ Y+ GT T + ++
Sbjct: 72 AQRLAEINRISLNSPLQVGQRLYIPPKAKRRA----EFNGYIE-PRGT---TVSPALEAS 123
Query: 253 CDATNNWTLQCKPSQFQ 269
+ P QFQ
Sbjct: 124 ARQAAPYLTYLAPFQFQ 140
>gi|413936259|gb|AFW70810.1| putative lysM-domain receptor-like protein kinase family protein
[Zea mays]
Length = 684
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 82 SVPAQKPIK------VPIHCICSNGTGVSDKVPVYTVK-KDDGLDFIARTIFGQLLKYQK 134
+VP+ P+ VP+ C C+ G G YT++ + + IA + L Q
Sbjct: 100 AVPSVSPLAPSSLVLVPVPCACTPG-GYYQHNSSYTIQFRGETYFIIANITYQGLTTCQA 158
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNAKVVHY--AHVVEEGSSFALIAQKFGT 191
++ N + + + G NLT+PL C+C AK Y ++++ G IA +F
Sbjct: 159 LIAHNPLHDSRGLVAGNNLTVPLRCACPSPAQAAKGFKYLLSYLIMWGDDVTSIAARFRA 218
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
D ++ N + D + L +PLK
Sbjct: 219 DPQAVLDANSLTADDIIFPFTTLLIPLK 246
>gi|356570127|ref|XP_003553242.1| PREDICTED: putative proline-rich receptor-like protein kinase
PERK11-like [Glycine max]
gi|148362066|gb|ABQ59611.1| LYK10 [Glycine max]
Length = 684
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
Query: 60 TVKNLRSILGANNFPPGTPRNFSVPAQ-----KPIKVPIHCICSNGTGVSDKVPVYTVKK 114
++ NL S LG N F FS + +P+ VPIHC C G S T K
Sbjct: 63 SLSNLTSYLGLNKFVIAQANGFSADTEFLSQDQPLLVPIHCKCIG--GFSQAELTKTTVK 120
Query: 115 DDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVH 171
+ IA+++ G L + I + N +P + L +PL CSC V +
Sbjct: 121 GESFYGIAQSLEG-LTTCKAIRDNNPGVSPWNLDDKVRLVVPLRCSCPFSSQVRPQPKLL 179
Query: 172 YAHVVEEGSSFALIAQKFGTDRDTLMKLNGI 202
++ V EG + + +A KF ++ ++ N I
Sbjct: 180 LSYPVSEGDTISNLASKFNITKEAIVYANNI 210
>gi|406989440|gb|EKE09224.1| peptidase M23 [uncultured bacterium]
Length = 355
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
+ ++ ANN+ P +++GQ L IP+P H+V +G + IA+ +G +
Sbjct: 49 RSLISANNLKPPYTLKVGQTLIIPMPSQ-------------HIVGKGETSQSIAETYGVN 95
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKA 227
D L + N I + S + G L +P + + KA
Sbjct: 96 VDVLAQENNITNPSYIAPGTALIIPSRDTTTMTKA 130
>gi|126641105|ref|YP_001084089.1| hypothetical protein A1S_1055 [Acinetobacter baumannii ATCC 17978]
Length = 999
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 707 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 763
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 764 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 809
>gi|226530653|ref|NP_001147941.1| protein kinase precursor [Zea mays]
gi|195614730|gb|ACG29195.1| protein kinase [Zea mays]
Length = 683
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 82 SVPAQKPIK------VPIHCICSNGTGVSDKVPVYTVK-KDDGLDFIARTIFGQLLKYQK 134
+VP+ P+ VP+ C C+ G G YT++ + + IA + L Q
Sbjct: 99 AVPSVSPLAPSSLVLVPVPCACTPG-GYYQHNSSYTIQFRGETYFIIANITYQGLTTCQA 157
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNAKVVHY--AHVVEEGSSFALIAQKFGT 191
++ N + + + G NLT+PL C+C AK Y ++++ G IA +F
Sbjct: 158 LIAHNPLHDSRGLVAGNNLTVPLRCACPSPAQAAKGFKYLLSYLIMWGDDVTSIAARFRA 217
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
D ++ N + D + L +PLK
Sbjct: 218 DPQAVLDANSLTADDIIFPFTTLLIPLK 245
>gi|406920863|gb|EKD58855.1| CHAP protein [uncultured bacterium]
Length = 346
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
V +Y V+ D L IA + I+ AN+I N D I G L I LP S
Sbjct: 102 VKMYIVQSGDTLGSIASK---NKVSINTILWANDIDNVDSIMPGDTLFI-LPVSG----- 152
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+VV++G S IA KF ++D ++ N + + KL AGE + +P
Sbjct: 153 -----IKYVVKDGDSIDAIASKFKAEKDKIIAFNDLPANGKLEAGEEIVIP 198
>gi|365924746|ref|ZP_09447509.1| phage-related lysin, partial [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 349
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA + Y ++ NNI +P +I +G+ L + V +
Sbjct: 252 YTVKSGDTLSKIAASYN---TTYTRLATLNNIKSPYIIYVGEKLKV-----SGSVTTSSK 303
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
V+Y V++G + ++I++ +GT ++ LNG+ + + + G+ L V
Sbjct: 304 VYY--TVKKGDTLSVISKNYGTTVASIKTLNGLKNVNYIYVGQSLRV 348
>gi|269837785|ref|YP_003320013.1| peptidoglycan-binding LysM [Sphaerobacter thermophilus DSM 20745]
gi|269787048|gb|ACZ39191.1| Peptidoglycan-binding LysM [Sphaerobacter thermophilus DSM 20745]
Length = 479
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 139 NNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMK 198
N I +PD I G LTI + D +A V Y V+EG + + IAQ+FG D ++
Sbjct: 109 NGIPDPDFILAGTTLTIEPDTTLDP--DAAVARYE--VQEGDTLSAIAQQFGVTVDAIVA 164
Query: 199 LNGIHDDSKLIAGEPLDVP 217
NGI + + G L +P
Sbjct: 165 ANGIANPDLITVGAVLLIP 183
>gi|188589965|ref|YP_001920289.1| peptidoglycan-binding LysM [Clostridium botulinum E3 str. Alaska
E43]
gi|188500246|gb|ACD53382.1| peptidoglycan-binding LysM [Clostridium botulinum E3 str. Alaska
E43]
Length = 220
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
K+ ++ V + D L IA+ G +Y++I E NNISNPDLI GQ + IP
Sbjct: 170 KINIHKVVEGDTLWHIAKKYLGDGNRYKEIAELNNISNPDLIYPGQVINIP 220
>gi|292487443|ref|YP_003530315.1| hypothetical protein EAMY_0957 [Erwinia amylovora CFBP1430]
gi|292898685|ref|YP_003538054.1| phospholipid-binding protein [Erwinia amylovora ATCC 49946]
gi|428784377|ref|ZP_19001868.1| hypothetical protein EaACW_0966 [Erwinia amylovora ACW56400]
gi|291198533|emb|CBJ45641.1| putative phospholipid-binding protein [Erwinia amylovora ATCC
49946]
gi|291552862|emb|CBA19907.1| Uncharacterized protein ygaU [Erwinia amylovora CFBP1430]
gi|426275939|gb|EKV53666.1| hypothetical protein EaACW_0966 [Erwinia amylovora ACW56400]
Length = 147
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I+++++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 98 YTVKSGDTLSAISQSVYGDASQYNKIFEANKPMLSHPDKIYPGQKLRIP 146
>gi|427424527|ref|ZP_18914650.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-136]
gi|425698827|gb|EKU68460.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-136]
Length = 1071
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
T VS K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 TSVSYKTEGYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGLS 835
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 VPE---------QYVVQSGDSLNAIASKYNLQTSYLADLNGLSRTAGLRAGQRLKL 882
>gi|378724795|gb|AFC35173.1| LysM-domain containing receptor-like kinase, partial [Melilotus
albus]
Length = 275
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 29 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 85
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 86 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTSYLEWENFNPG 142
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C D K + Y +V + + L++ KFG + ++
Sbjct: 143 LRPTLLSKDIKIVVPLSCKCPSKDQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 202
Query: 199 LN 200
N
Sbjct: 203 EN 204
>gi|333997996|ref|YP_004530608.1| LysM domain/M23/M37 peptidase domain-containing protein [Treponema
primitia ZAS-2]
gi|333740665|gb|AEF86155.1| LysM domain/M23/M37 peptidase domain protein [Treponema primitia
ZAS-2]
Length = 304
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
++ V++ D + +ART +G + +Q I+ N I + IQIGQ + IP S D A
Sbjct: 12 IHIVQRGDTIYSLART-YG--VNFQDILVLNGIDDARRIQIGQRIRIPGSSSPDLSRMAP 68
Query: 169 VVH--YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V H V G + I++ +G TL+ N + + L G+ L +P
Sbjct: 69 QVQSFLEHRVVRGETLYGISRLYGLSLQTLLSANNLSEKYMLKTGDTLRIP 119
>gi|224133922|ref|XP_002327712.1| predicted protein [Populus trichocarpa]
gi|222836797|gb|EEE75190.1| predicted protein [Populus trichocarpa]
Length = 630
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
S P+ + + VP++C CS S Y V+ +D L IA + L Q +
Sbjct: 83 SFPSNQLVIVPVNCSCSGE--YSQANASYIVQPNDTLFLIANNTYQGLSTCQALQNQKTT 140
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNAKV-VHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
D++ G+ LT+PL C+C + + + + Y +++V G I+++FG ++
Sbjct: 141 RTDDILS-GETLTVPLRCACPTKNQSDLGIRYLLSYLVTPGDDVPAISEQFGAATGRTLE 199
Query: 199 LNGI 202
NG+
Sbjct: 200 ANGL 203
>gi|307280654|ref|ZP_07561702.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0860]
gi|421512717|ref|ZP_15959516.1| endolysin [Enterococcus faecalis ATCC 29212]
gi|306504020|gb|EFM73237.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0860]
gi|401674173|gb|EJS80532.1| endolysin [Enterococcus faecalis ATCC 29212]
Length = 412
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ++ N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 338 YQRLAALNGLTNPNLIYPGQILKV----------NGSVVSNIYTVQYGDNLSSIAAKLGT 387
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + +G+ L
Sbjct: 388 TYQTLAALNGLANPNLIYSGQTL 410
>gi|293608834|ref|ZP_06691137.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829407|gb|EFF87769.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 1071
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
T VS K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 TSVSYKTEGYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGLS 835
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 VPE---------QYVVQSGDSLNAIASKYNLQTSYLADLNGLSRTAGLRAGQRLKL 882
>gi|91223496|ref|ZP_01258761.1| membrane-bound lytic murein transglycosylase D [Vibrio
alginolyticus 12G01]
gi|91191582|gb|EAS77846.1| membrane-bound lytic murein transglycosylase D [Vibrio
alginolyticus 12G01]
Length = 527
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 85/230 (36%), Gaps = 28/230 (12%)
Query: 59 FTVKNLRSILGANN---FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKD 115
+VK L+S A N P P +P +K + G G+ KV Y VK
Sbjct: 293 ISVKELQSYNPAYNQWSTAPEGPHQLLIPVEKKETFLTKVEKNRGKGM--KVARYKVKSG 350
Query: 116 DGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH---- 171
D L +A +G K I AN +SN + I+IGQ L IP + DD A
Sbjct: 351 DSLSVLANK-YGTTTKV--IRRANGLSNNN-IRIGQYLLIPT-STKDDAKYALTAQNRLN 405
Query: 172 -----------YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
HVV+ G S IA+ +L K NG+ L G+ L + +
Sbjct: 406 KTQSRARGQLKLTHVVQSGESLWSIARNNKVSYKSLAKWNGMSPKDPLRVGQKLVIWKDS 465
Query: 221 CNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
S+ F N V +G S K + + W K QP
Sbjct: 466 DKGSVIRTVFYN---VRSGDTISGIASKFKVKTNDIVKWNSLHKKKYLQP 512
>gi|397680826|ref|YP_006522361.1| hypothetical protein MYCMA_2627 [Mycobacterium massiliense str. GO
06]
gi|420934058|ref|ZP_15397331.1| hypothetical protein MM1S1510930_4898 [Mycobacterium massiliense
1S-151-0930]
gi|420935391|ref|ZP_15398661.1| hypothetical protein MM1S1520914_0116 [Mycobacterium massiliense
1S-152-0914]
gi|420944317|ref|ZP_15407572.1| hypothetical protein MM1S1530915_4447 [Mycobacterium massiliense
1S-153-0915]
gi|420949694|ref|ZP_15412943.1| hypothetical protein MM1S1540310_4452 [Mycobacterium massiliense
1S-154-0310]
gi|420954421|ref|ZP_15417663.1| hypothetical protein MM2B0626_4666 [Mycobacterium massiliense
2B-0626]
gi|420958597|ref|ZP_15421831.1| hypothetical protein MM2B0107_4008 [Mycobacterium massiliense
2B-0107]
gi|420963546|ref|ZP_15426770.1| hypothetical protein MM2B1231_4731 [Mycobacterium massiliense
2B-1231]
gi|420994534|ref|ZP_15457680.1| hypothetical protein MM2B0307_3962 [Mycobacterium massiliense
2B-0307]
gi|420995490|ref|ZP_15458633.1| hypothetical protein MM2B0912R_0116 [Mycobacterium massiliense
2B-0912-R]
gi|392132470|gb|EIU58215.1| hypothetical protein MM1S1510930_4898 [Mycobacterium massiliense
1S-151-0930]
gi|392145923|gb|EIU71647.1| hypothetical protein MM1S1530915_4447 [Mycobacterium massiliense
1S-153-0915]
gi|392146898|gb|EIU72619.1| hypothetical protein MM1S1520914_0116 [Mycobacterium massiliense
1S-152-0914]
gi|392150735|gb|EIU76448.1| hypothetical protein MM1S1540310_4452 [Mycobacterium massiliense
1S-154-0310]
gi|392153334|gb|EIU79041.1| hypothetical protein MM2B0626_4666 [Mycobacterium massiliense
2B-0626]
gi|392180636|gb|EIV06288.1| hypothetical protein MM2B0307_3962 [Mycobacterium massiliense
2B-0307]
gi|392191310|gb|EIV16935.1| hypothetical protein MM2B0912R_0116 [Mycobacterium massiliense
2B-0912-R]
gi|392246459|gb|EIV71936.1| hypothetical protein MM2B1231_4731 [Mycobacterium massiliense
2B-1231]
gi|392248323|gb|EIV73799.1| hypothetical protein MM2B0107_4008 [Mycobacterium massiliense
2B-0107]
gi|395459091|gb|AFN64754.1| Uncharacterized protein MYCMA_2627 [Mycobacterium massiliense str.
GO 06]
Length = 449
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L +A +G Y+ I A+ IS+P I +GQ L IP DV
Sbjct: 56 YTVAAGDTLSALALRFYGDAELYRLIAAASGISDPGAIGVGQRLVIP------DVTR--- 106
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRD---TLMKLNGIHDDSKLIAGEPL 214
+ V G + + +A +F D + + +NGI D + + AG L
Sbjct: 107 ----YTVAAGDTLSALALRFYGDAELYRLIAAVNGISDPAAVHAGRAL 150
>gi|385787543|ref|YP_005818652.1| Putative LysM domain containing protein [Erwinia sp. Ejp617]
gi|310766815|gb|ADP11765.1| Putative LysM domain containing protein [Erwinia sp. Ejp617]
Length = 147
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I+++++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 98 YTVKSGDTLSAISKSVYGDANQYNKIFEANKPMLSHPDKIYPGQKLRIP 146
>gi|229549670|ref|ZP_04438395.1| endolysin [Enterococcus faecalis ATCC 29200]
gi|255972367|ref|ZP_05422953.1| phage lysin [Enterococcus faecalis T1]
gi|397700223|ref|YP_006538011.1| lysM domain protein [Enterococcus faecalis D32]
gi|422725219|ref|ZP_16781687.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0312]
gi|229305150|gb|EEN71146.1| endolysin [Enterococcus faecalis ATCC 29200]
gi|255963385|gb|EET95861.1| phage lysin [Enterococcus faecalis T1]
gi|315159905|gb|EFU03922.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0312]
gi|397336862|gb|AFO44534.1| lysM domain protein [Enterococcus faecalis D32]
Length = 412
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ++ N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 338 YQRLAALNGLTNPNLIYPGQILKV----------NGSVVSNIYTVQYGDNLSSIAAKLGT 387
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + +G+ L
Sbjct: 388 TYQTLAALNGLANPNLIYSGQTL 410
>gi|451970889|ref|ZP_21924113.1| membrane-bound lytic murein transglycosylase D [Vibrio
alginolyticus E0666]
gi|451933306|gb|EMD80976.1| membrane-bound lytic murein transglycosylase D [Vibrio
alginolyticus E0666]
Length = 527
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 85/230 (36%), Gaps = 28/230 (12%)
Query: 59 FTVKNLRSILGANN---FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKD 115
+VK L+S A N P P +P +K + G G+ KV Y VK
Sbjct: 293 ISVKELQSYNPAYNQWSTAPEGPHQLLIPVEKKETFLTKVEKNRGKGM--KVARYKVKSG 350
Query: 116 DGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH---- 171
D L +A +G K I AN +SN + I+IGQ L IP + DD A
Sbjct: 351 DSLSVLANK-YGTTTKV--IRRANGLSNNN-IRIGQYLLIPT-STKDDAKYALTAQNRLN 405
Query: 172 -----------YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
HVV+ G S IA+ +L K NG+ L G+ L + +
Sbjct: 406 KTQSRARGQLKLTHVVQSGESLWSIARNNKVSYKSLAKWNGMSPKDPLRVGQKLVIWKDS 465
Query: 221 CNSSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
S+ F N V +G S K + + W K QP
Sbjct: 466 DKGSVIRTVFYN---VRSGDTISGIASKFKVKTNDIVKWNSLHKKKYLQP 512
>gi|345302081|ref|YP_004823983.1| Lytic transglycosylase catalytic [Rhodothermus marinus
SG0.5JP17-172]
gi|345111314|gb|AEN72146.1| Lytic transglycosylase catalytic [Rhodothermus marinus
SG0.5JP17-172]
Length = 733
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 89 IKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQ 148
I+V + V+ + VYTV++ D L IA+ FG + I NN+ + + IQ
Sbjct: 615 IRVGQELVLYLSEPVTPERVVYTVRRGDTLSEIAQR-FG--VSVTAIKRWNNLDD-NTIQ 670
Query: 149 IGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKL 208
IGQ LTI P D + H V G + + IA++FG + + NG+ S++
Sbjct: 671 IGQRLTI-YP-EAGDTQGYTIYH----VRPGDTLSEIAKRFGVSVRDIQRWNGLR-SSRI 723
Query: 209 IAGEPLDV 216
G+ L +
Sbjct: 724 YPGQRLKI 731
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VYTV++ D L IA+ +G + I NN+S + I++GQ L + L + V +
Sbjct: 581 VYTVRRGDALSEIAQK-YG--VSVADIKRWNNLSG-NTIRVGQELVLYL---SEPVTPER 633
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNS 223
VV+ V G + + IAQ+FG + + N + DD+ + G+ L + +A ++
Sbjct: 634 VVY---TVRRGDTLSEIAQRFGVSVTAIKRWNNL-DDNTIQIGQRLTIYPEAGDT 684
>gi|333983126|ref|YP_004512336.1| peptidoglycan-binding lysin domain-containing protein [Methylomonas
methanica MC09]
gi|333807167|gb|AEF99836.1| Peptidoglycan-binding lysin domain protein [Methylomonas methanica
MC09]
Length = 154
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 93 IHCICSNGTGVS-------DKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISN 143
I + GTGV V Y ++ D L IA+ +G Y KI EAN I +
Sbjct: 80 IDIVDDGGTGVDATAALEPQNVEYYLIQSGDSLSKIAKKYYGNGNDYPKIFEANREVIKD 139
Query: 144 PDLIQIGQNLTIPLP 158
PDLI GQ + IPLP
Sbjct: 140 PDLIFPGQKIRIPLP 154
>gi|443288151|ref|ZP_21027245.1| Peptidoglycan-binding protein with lysM domain [Micromonospora
lupini str. Lupac 08]
gi|385881728|emb|CCH22338.1| Peptidoglycan-binding protein with lysM domain [Micromonospora
lupini str. Lupac 08]
Length = 472
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKV-PVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN 140
S P + P+ + G G D+ PVY V + D L +A + Y+++ + N
Sbjct: 172 SGPVRAAGSGPLGLVAPPGPGGGDQAAPVYRVARGDYLGEVAERYLDEFGDYRQLAKLNR 231
Query: 141 ISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH 171
+ +PD I+ GQ L +P + D H
Sbjct: 232 LDDPDRIRPGQLLRLP----AEATDQGARTH 258
>gi|392393391|ref|YP_006429993.1| LysM domain-containing protein [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390524469|gb|AFM00200.1| LysM domain-containing protein [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 543
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
VYTVK D L IA+ ++G Y KI EAN + NP+LI GQ L IP
Sbjct: 493 VYTVKSGDTLGTIAKQMYGDGSLYTKIYEANKERLKNPNLIFEGQKLVIP 542
>gi|423719284|ref|ZP_17693466.1| glycoside hydrolase, family 18 [Geobacillus thermoglucosidans
TNO-09.020]
gi|383368187|gb|EID45462.1| glycoside hydrolase, family 18 [Geobacillus thermoglucosidans
TNO-09.020]
Length = 469
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+TV+ + L IAR +G + IV+AN ISNP ++ G L IP P +
Sbjct: 53 HTVRSGETLWTIARR-YG--ISQDAIVQANRISNPSVLYPGTVLLIP-PRT--------- 99
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
H V+ G + + IA+++GT +++ N I D + + G L +P
Sbjct: 100 ----HTVQRGETLSQIAERYGTTVQDILRANRIADPNVIFPGMVLTIP 143
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKA 227
H+V+ G + IAQ++G + ++ NG+ D ++L AG+ L +P+ ++++
Sbjct: 4 HIVQRGENLWAIAQRYGVPLEQIVTANGLRDANRLTAGQALVIPVPYRYHTVRS 57
>gi|377556326|ref|ZP_09786039.1| Extracellular surface protein [Lactobacillus gastricus PS3]
gi|376168550|gb|EHS87305.1| Extracellular surface protein [Lactobacillus gastricus PS3]
Length = 197
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 103 VSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCD 162
V++ YTVK D L+ I++ G IV+ANNIS+ ++I +G+ LTIP D
Sbjct: 29 VANADTTYTVKSGDTLNSISQQYVGDKSLVSSIVKANNISDQNVIYVGEQLTIP----TD 84
Query: 163 DVDNA 167
DNA
Sbjct: 85 SSDNA 89
>gi|408672307|ref|YP_006872055.1| Peptidoglycan-binding lysin domain-containing protein [Emticicia
oligotrophica DSM 17448]
gi|387853931|gb|AFK02028.1| Peptidoglycan-binding lysin domain-containing protein [Emticicia
oligotrophica DSM 17448]
Length = 152
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+TV+K D L IA+ +G ++KY I EAN + +PDLI GQ L IP
Sbjct: 102 HTVEKGDTLSKIAKQYYGDMMKYPVIFEANKPMLKDPDLIYPGQVLRIP 150
>gi|310779415|ref|YP_003967748.1| Peptidoglycan-binding lysin domain-containing protein [Ilyobacter
polytropus DSM 2926]
gi|309748738|gb|ADO83400.1| Peptidoglycan-binding lysin domain protein [Ilyobacter polytropus
DSM 2926]
Length = 279
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 53 SEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVP-VYT 111
SE+ + T K GA S + + + ++ T +++P Y
Sbjct: 176 SEMTGVVTEKATEMKEGATEMTGAVGEKASEMTEAVSEKASEMMGTSETAAMEELPSTYI 235
Query: 112 VKKDDGLDFIARTIFGQL--LKYQKIVEANNISNPDLIQIGQNLTIP 156
VKK D L I GQ + ++K+ E NNI NPD + +GQ + IP
Sbjct: 236 VKKGDSLFEI-----GQKYNMSWEKLAEENNIENPDYLHVGQEIRIP 277
>gi|399887359|ref|ZP_10773236.1| hypothetical protein CarbS_02300 [Clostridium arbusti SL206]
Length = 428
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIK-ADSFDN 232
+VV+ G S IA+++G + + ++K+NG+ L++GE L VP N ++K DS N
Sbjct: 4 YVVKPGDSLWSIARRYGANYNDIIKINGLEHRKYLVSGEALLVPTTGVNYTVKPGDSIWN 63
>gi|422517791|ref|ZP_16593871.1| LysM domain protein, partial [Propionibacterium acnes HL074PA1]
gi|313773049|gb|EFS39015.1| LysM domain protein [Propionibacterium acnes HL074PA1]
Length = 470
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ +D L IA G ++++I EA+ I ++ GQ L +P+P + V
Sbjct: 129 YTVRANDYLWKIAEHYCGDGAQFRRIAEASGIDPHSELKAGQKLILPVPKNTAAV----- 183
Query: 170 VHYAHVVEEGSSFALIAQKF---GTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
H V+ G IA+ + G + + +GI S L G+ L +P
Sbjct: 184 ----HSVKAGEYLWKIAEHYYGDGAQYHKIAEASGIDAHSDLAVGQKLVIP 230
>gi|444424936|ref|ZP_21220385.1| membrane-bound lytic murein transglycosylase D [Vibrio campbellii
CAIM 519 = NBRC 15631]
gi|444241721|gb|ELU53241.1| membrane-bound lytic murein transglycosylase D [Vibrio campbellii
CAIM 519 = NBRC 15631]
Length = 528
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 61 VKNLRSILGANN---FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDG 117
VK L+S A N P P +P +K + + G G+ KV Y VK+ D
Sbjct: 296 VKELQSYNPAYNQWSTAPDGPHQLLIPIEKKDQFLAQVKKNRGKGM--KVARYKVKRGDS 353
Query: 118 LDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH------ 171
L +A+ +G K I AN ++N + I++GQ L IP + DD A
Sbjct: 354 LSVLAQK-YGTTTKV--IQRANGLTNNN-IRVGQYLMIPT-STKDDAKYALTAENRLNKT 408
Query: 172 ---------YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
HVV+ G S IA++ +L K NG+ L G+ L
Sbjct: 409 QSKSRGQFKLTHVVQSGESLWSIAKENKVSHKSLAKWNGMGPKDTLRIGQKL 460
>gi|259909283|ref|YP_002649639.1| LysM domain-containing protein [Erwinia pyrifoliae Ep1/96]
gi|387872244|ref|YP_005803625.1| hypothetical protein EPYR_02874 [Erwinia pyrifoliae DSM 12163]
gi|224964905|emb|CAX56428.1| Putative LysM domain containing protein [Erwinia pyrifoliae Ep1/96]
gi|283479338|emb|CAY75254.1| Uncharacterized protein ygaU [Erwinia pyrifoliae DSM 12163]
Length = 147
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I+++++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 98 YTVKSGDTLSAISKSVYGDANQYNKIFEANKPMLSHPDKIYPGQKLRIP 146
>gi|312110257|ref|YP_003988573.1| glycoside hydrolase family protein [Geobacillus sp. Y4.1MC1]
gi|311215358|gb|ADP73962.1| glycoside hydrolase family 18 [Geobacillus sp. Y4.1MC1]
Length = 469
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+TV+ + L IAR +G + IV+AN ISNP ++ G L IP P +
Sbjct: 53 HTVRSGETLWTIARR-YG--ISQDAIVQANRISNPSVLYPGTVLLIP-PRT--------- 99
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
H V+ G + + IA+++GT +++ N I D + + G L +P
Sbjct: 100 ----HTVQRGETLSQIAERYGTTVQDILRANRIADPNVIFPGMVLTIP 143
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKA 227
H+V+ G + IAQ++G + ++ NG+ D ++L AG+ L +P+ ++++
Sbjct: 4 HIVQRGENLWAIAQRYGVPLEQIVTANGLRDANRLTAGQALVIPVPYRYHTVRS 57
>gi|45597397|ref|NP_996722.1| LysB [Lactococcus phage phiLC3]
gi|530798|gb|AAA20878.1| lysin [Lactococcus phage phiLC3]
Length = 429
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK+ D L IA + +Q++ N++SNP++I GQ +++ S
Sbjct: 333 YIVKQGDTLSGIASNLG---TNWQELARQNSLSNPNMIYSGQVISLTGGQSG-------A 382
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
+ V+ G + + IA++ GT +L+ +NGI + + + AG+ L+
Sbjct: 383 TARTYTVQSGDNLSSIARRLGTTVQSLVSMNGISNPNLIYAGQTLN 428
>gi|442803854|ref|YP_007372003.1| glycoside hydrolase family 18 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739704|gb|AGC67393.1| glycoside hydrolase family 18 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 508
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP-LPCSCDDVDNAK 168
YTV D L IAR FG + + +VEAN + + DL IGQ + IP +P
Sbjct: 3 YTVVAGDSLYQIARR-FGTTV--ETLVEANKLQSTDL-NIGQGIYIPPVPGRA------- 51
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ + V G + +A+ FGT L +LNGI +++ + AG+ + +P
Sbjct: 52 ---FQYTVRAGDTLYGLARLFGTTIQALAELNGI-ENTTIYAGQRILIPF 97
>gi|336234719|ref|YP_004587335.1| glycoside hydrolase family protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|335361574|gb|AEH47254.1| glycoside hydrolase family 18 [Geobacillus thermoglucosidasius
C56-YS93]
Length = 469
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+TV+ + L IAR +G + IV+AN ISNP ++ G L IP P +
Sbjct: 53 HTVRSGETLWTIARR-YG--ISQDAIVQANRISNPSVLYPGTVLLIP-PRT--------- 99
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
H V+ G + + IA+++GT +++ N I D + + G L +P
Sbjct: 100 ----HTVQRGETLSQIAERYGTTVQDILRANRIADPNVIFPGMVLTIP 143
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKA 227
H+V+ G + IAQ++G + ++ NG+ D ++L AG+ L +P+ ++++
Sbjct: 4 HIVQRGENLWAIAQRYGVPLEQIVTANGLRDANRLTAGQALVIPVPYRYHTVRS 57
>gi|254511233|ref|ZP_05123300.1| LysM domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534944|gb|EEE37932.1| LysM domain protein [Rhodobacteraceae bacterium KLH11]
Length = 475
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 24/117 (20%)
Query: 42 VGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGT 101
V + P+ T S +++ F + + ++ A PG PAQ P I +
Sbjct: 380 VDEVAPDGTVASRLETPFKREPVETLRAAETAQPG-----ETPAQTPS---IRSV----- 426
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
TV+K D L I+R FG + Y K+ EAN I +PDLI GQ TIP
Sbjct: 427 ---------TVQKGDTLWAISRDRFGDGVLYVKLFEANKDAIRDPDLIYPGQIFTIP 474
>gi|430376995|ref|ZP_19431128.1| LysM domain/BON superfamily protein [Moraxella macacae 0408225]
gi|429540132|gb|ELA08161.1| LysM domain/BON superfamily protein [Moraxella macacae 0408225]
Length = 172
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+YTVK D L IA+ ++G +Y KI AN +S+PD I +GQ L IP
Sbjct: 122 MYTVKSGDTLSKIAKEMYGNANEYHKIFAANQPLLSHPDKIYVGQVLRIP 171
>gi|188586674|ref|YP_001918219.1| polysaccharide deacetylase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351361|gb|ACB85631.1| polysaccharide deacetylase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 368
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY V+ D L +A + +++ N I PD + GQ + +P +
Sbjct: 45 VYRVESGDNLYSLASEFETSI---DELISLNPIEKPDHLLEGQVMVVP----------GR 91
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
V + +E G + + IA+ + D D L + N + D+ LI+G+ L++PL
Sbjct: 92 VTE-EYTIESGDTLSQIAEDYEVDMDMLAEYNNLKDEDILISGQTLEIPL 140
>gi|388602543|ref|ZP_10160939.1| membrane-bound lytic murein transglycosylase D [Vibrio campbellii
DS40M4]
Length = 528
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
P P +P +K + + G G+ KV Y VK+ D L +A+ +G K
Sbjct: 313 PDGPHQLLIPIEKKDQFLAQVKKNRGKGM--KVARYKVKRGDSLSVLAQK-YGTTTKV-- 367
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH---------------YAHVVEEG 179
I AN ++N + I++GQ L IP + DD A HVV+ G
Sbjct: 368 IQRANGLTNNN-IRVGQYLMIPT-STKDDAKYALTAENRLNKTQSKSRGQFKLTHVVQSG 425
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
S IA++ +L K NG+ L G+ L
Sbjct: 426 ESLWSIAKENKVSHKSLAKWNGMGPKDTLRIGQKL 460
>gi|308185882|ref|YP_003930013.1| hypothetical protein Pvag_0351 [Pantoea vagans C9-1]
gi|308056392|gb|ADO08564.1| Uncharacterized protein ygaU [Pantoea vagans C9-1]
Length = 145
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 101 TGVSDKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQI 149
T V DKV V YTVKK D L I++ ++G +Y KI EAN +++PD I
Sbjct: 78 TKVEDKVTVTDSAAESELYTVKKGDTLSAISKQVYGNANEYNKIFEANKPMLTHPDKIYP 137
Query: 150 GQNLTIP 156
GQ L IP
Sbjct: 138 GQVLRIP 144
>gi|262379329|ref|ZP_06072485.1| soluble lytic murein transglycosylase [Acinetobacter radioresistens
SH164]
gi|262298786|gb|EEY86699.1| soluble lytic murein transglycosylase [Acinetobacter radioresistens
SH164]
Length = 1041
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 99 NGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLP 158
N +G YTVK + L+ IA + + +++ E NN+ + + GQNL IP
Sbjct: 936 NSSGSHRDTERYTVKNGESLNTIASRVG---ISVKELAELNNLESRAGLLRGQNLLIPKT 992
Query: 159 CSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ ++ V+ G + +A K+G + L ++N I ++L GE + VP
Sbjct: 993 VT------------SYTVKRGDTLIGLANKYGMNTSELAEMNDIQPSTQLRIGEVIKVP 1039
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
K Y V++ D L IA + ++ + NNI+ ++IGQ L +P S D
Sbjct: 814 KTESYKVQRGDTLTSIAAQ---SKVSVSELAQLNNINTGSGVRIGQTLKVPAGASMPD-- 868
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
++V+ G + +A K+ + L LNG++ +S L G+ + +
Sbjct: 869 -------EYIVQPGDTLTSVAGKYHLQVNFLAGLNGLNRNSGLRVGQKIKL 912
>gi|33239825|ref|NP_874767.1| LysM repeat-containing protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237351|gb|AAP99419.1| LysM repeats containing protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 291
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
+ +++ N I N D +++GQ I LP V++ + + H V G S A I+ + +
Sbjct: 44 RSLMDTNGIYNADNLKVGQ--KIKLPKDASKVND--IASFTHTVTAGQSIAKISDIYEVN 99
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI 225
++KLN I D + L+ G+ L +P A +++
Sbjct: 100 ELDIIKLNNIKDANILLLGQVLKLPKSAKKTAL 132
>gi|421656465|ref|ZP_16096771.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-72]
gi|408505151|gb|EKK06877.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-72]
Length = 1071
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKVNSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|421854780|ref|ZP_16287165.1| putative lytic transglycosylase [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
gi|403189795|dbj|GAB73366.1| putative lytic transglycosylase [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
Length = 1017
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 99 NGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLP 158
N +G YTVK + L+ IA + + +++ E NN+ + + GQNL IP
Sbjct: 912 NSSGSHRDTERYTVKNGESLNTIASRVG---ISVKELAELNNLESRAGLLRGQNLLIPKT 968
Query: 159 CSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ + V+ G + +A K+G + L ++N I ++L GE + VP
Sbjct: 969 VTS------------YTVKRGDTLIGLANKYGMNTSELAEMNNIQPSTQLRIGEVIKVP 1015
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
K Y V++ D L IA + + + NNI+ ++IGQ L +P S D
Sbjct: 790 KTESYKVQRGDTLTSIAAQ---SKVSVSDLAQLNNINTGSGVRIGQTLKVPAGASMPD-- 844
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
++V+ G + +A K+ + L LNGI+ +S L G+ + +
Sbjct: 845 -------EYIVQPGDTLTSVAGKYHLQVNFLAGLNGINRNSGLRVGQKIKL 888
>gi|163257385|emb|CAO02956.1| LysM-domain containing receptor-like kinase [Medicago truncatula
var. truncatula]
Length = 498
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 30 CSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPI 89
C A R Q+ PN ++S I +F + LR I A+N + +P Q +
Sbjct: 6 CETYVAYRAQS------PNFLSLSNISDIFNLSPLR-IAKASNIEAEDKK--LIPDQLLL 56
Query: 90 KVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQI 149
VP+ C C+ ++ Y++K+ D ++ T + L Y + N +P L+ +
Sbjct: 57 -VPVTCGCTKNHSFAN--ITYSIKQGDNFFILSITSYQNLTNYLEFKNFNPNLSPTLLPL 113
Query: 150 GQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLN 200
+++PL C C + K + Y +V ++ + L++ KFG + ++ N
Sbjct: 114 DTKVSVPLFCKCPSKNQLNKGIKYLITYVWQDNDNVTLVSSKFGASQVEMLAEN 167
>gi|415885924|ref|ZP_11547747.1| spore peptidoglycan hydrolase [Bacillus methanolicus MGA3]
gi|387588577|gb|EIJ80898.1| spore peptidoglycan hydrolase [Bacillus methanolicus MGA3]
Length = 470
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Query: 134 KIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDR 193
+IV AN + N D + IGQ L IP+ H V G + IAQ++G
Sbjct: 25 QIVTANELPNADRLVIGQALVIPVAAR------------QHTVRTGETLWQIAQRYGIPI 72
Query: 194 DTLMKLNGIHDDSKLIAGEPLDVPLK 219
++++ N I D S L G L +P +
Sbjct: 73 RSILQANQISDPSVLYPGMVLFIPAR 98
>gi|423422165|ref|ZP_17399253.1| hypothetical protein IE3_05636 [Bacillus cereus BAG3X2-1]
gi|401094929|gb|EJQ02998.1| hypothetical protein IE3_05636 [Bacillus cereus BAG3X2-1]
Length = 265
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
P+ + I SN G + VYTV+K+D L+ I++ + Q + +AN+ +N D I
Sbjct: 11 PLSAAMIAIVSNPVGAAAST-VYTVQKNDTLEAISKQY---EVSVQSLKQANSKAN-DRI 65
Query: 148 QIGQNLTIPLPCSCDDV---DNAKV----VHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
IG+ LTIP + ++ +N+ V + V+ G + + I+Q++ ++ + N
Sbjct: 66 NIGERLTIPGSSAANEYVQKNNSTVSTNTYQAIYQVKSGDTLSSISQQYKVSIQSIKQNN 125
Query: 201 GIHDDSKLIAGEPLDV 216
+ D S++ G+ L +
Sbjct: 126 NV-DGSQIFVGQHLKI 140
>gi|376262255|ref|YP_005148975.1| LysM domain-containing protein [Clostridium sp. BNL1100]
gi|373946249|gb|AEY67170.1| LysM domain-containing protein [Clostridium sp. BNL1100]
Length = 319
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTI 155
G DKV YTVK D L I+ +G KY+KI EAN I NP++I GQ + I
Sbjct: 264 GSGDKV--YTVKAGDTLSKISAKFYGDSSKYKKIYEANKARIKNPNMIYEGQKIVI 317
>gi|336428709|ref|ZP_08608685.1| hypothetical protein HMPREF0994_04691 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336004556|gb|EGN34617.1| hypothetical protein HMPREF0994_04691 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 142
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 92 PIHCICSNGTGVSDKVPV-YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIG 150
P I S+ S ++P Y V+ D L I R +G L K +I E N+ISNP+ + G
Sbjct: 76 PASDITSDAVAASAQIPSSYIVQSGDSLALICRRFYGNLDKMDEICELNSISNPNRLTPG 135
Query: 151 QNLTIP 156
Q + +P
Sbjct: 136 QKILLP 141
>gi|119900059|ref|YP_935272.1| LysM domain/BON superfamily protein [Azoarcus sp. BH72]
gi|119672472|emb|CAL96386.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 164
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTV + D L I++ +G KYQKI EAN +S+PD I GQ L IP
Sbjct: 113 YTVARGDTLSAISKKHYGDANKYQKIFEANRPMLSHPDKIYPGQVLRIP 161
>gi|158520711|ref|YP_001528581.1| lytic transglycosylase catalytic subunit [Desulfococcus oleovorans
Hxd3]
gi|158509537|gb|ABW66504.1| Lytic transglycosylase catalytic [Desulfococcus oleovorans Hxd3]
Length = 595
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 18/161 (11%)
Query: 71 NNFPPGTPRNFSVPAQKPIKVPIH----CICS-NGTGVSD----KVPVYTVKKDDGLDFI 121
N P +N P+ P++VP + S N V++ + + V+ + L I
Sbjct: 380 NELNPELRQNILPPSAYPLRVPAEKSEAVVASINSLPVTEPAQTQFAYHRVRSGETLSTI 439
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL-----PCSCDDVDNAKVVHYAHVV 176
AR + I ANNI + I G+ L IPL + A + +H V
Sbjct: 440 ARRYRTSV---SNIARANNIYKRNFIVAGKILKIPLSSNWVATKTQKFEKASEIPASHRV 496
Query: 177 EEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
G S ++A ++ T + + +LNG+ S L G+ L +P
Sbjct: 497 RSGESLWILANRYSTTVNAIQRLNGLSGTS-LRVGQVLKIP 536
>gi|378948239|ref|YP_005205727.1| hypothetical protein PSF113_0299 [Pseudomonas fluorescens F113]
gi|359758253|gb|AEV60332.1| Hypothetical protein PSF113_0299 [Pseudomonas fluorescens F113]
Length = 146
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 103 VSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
V+ + TV+K D L I++ ++G KYQKI EAN +S+PD I GQ L IP
Sbjct: 90 VAKEAKFVTVEKGDTLSAISKRVYGDANKYQKIFEANKPMLSHPDKIYPGQVLRIP 145
>gi|433658372|ref|YP_007275751.1| Membrane-bound lytic murein transglycosylase D precursor [Vibrio
parahaemolyticus BB22OP]
gi|432509060|gb|AGB10577.1| Membrane-bound lytic murein transglycosylase D precursor [Vibrio
parahaemolyticus BB22OP]
Length = 528
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 86/228 (37%), Gaps = 28/228 (12%)
Query: 61 VKNLRSILGANN---FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDG 117
VK L+S A N P P +P +K + G G+ KV Y VK D
Sbjct: 296 VKELQSYNPAYNQWSTAPEGPHQLLIPVEKKDAFLTQVESNRGKGM--KVARYKVKSGDS 353
Query: 118 LDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH------ 171
L +A+ +G K I AN + N + I+IGQ L IP + DD A
Sbjct: 354 LSMLAKK-YGTTSKV--IRRANGLPNNN-IRIGQYLLIPT-STKDDSKYALTAQNRLNKT 408
Query: 172 ---------YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
+HVV+ G S IA+ +L K NG+ L G+ L + K+
Sbjct: 409 QSQARGQLKLSHVVQSGESLWSIARDNKVSHKSLAKWNGMGPKDTLRVGQKLVIWKKSDQ 468
Query: 223 SSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
++ F N V +G S K + + W K +P
Sbjct: 469 GAVIRTVFYN---VRSGDTISGIASKFKVKSNDIVKWNSLHKQKYLKP 513
>gi|403669737|ref|ZP_10934917.1| hypothetical protein KJC8E_12897 [Kurthia sp. JC8E]
Length = 412
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 108 PVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI----PLPCSCDD 163
YTVK D L IA +G Y +++ NN+S+ +I GQ LT+ S
Sbjct: 32 ATYTVKSGDNLSTIASK-YGT--SYTNLMKQNNLSST-VIYPGQTLTVNGKMASTSSSTS 87
Query: 164 VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ + V+ G + + IA K+GT +MKLN +H + + AG+ L V
Sbjct: 88 TNSTSTNSSTYTVKSGDTLSAIASKYGTSYTNIMKLNNLH-STMIYAGQKLKVS 140
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA Y I++ N++ N +I +GQ L + S + ++
Sbjct: 162 YTVKSGDTLSSIASK---HGTSYTNIMKLNSL-NSTMIYVGQKLKVSGSASTNSTSSSSS 217
Query: 170 VHYA-----HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ H V+ G S IA ++ T LM+LNG+ + + + G+ L V
Sbjct: 218 NSSSSSTSTHTVKAGESLGKIASQYNTTYAKLMQLNGL-NSTLIFVGQKLKVS 269
>gi|28211616|ref|NP_782560.1| CLV1 receptor kinase [Clostridium tetani E88]
gi|28204058|gb|AAO36497.1| CLV1 receptor kinase [Clostridium tetani E88]
Length = 690
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 47 PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDK 106
PN +I+E + L KN +++ + P P + +K IK P +DK
Sbjct: 595 PNVASITE-KDLENAKNNKAVKPVDKKPTTKPDSKDSKDKKVIK-P-----------ADK 641
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VYTVK D L I + + Y+KI +ANNI N +LI +GQ L IP
Sbjct: 642 KTVYTVKSGDCLYLIGQKYN---VSYKKIAKANNIKNVNLIFVGQRLIIP 688
>gi|357483207|ref|XP_003611890.1| Wall-associated receptor kinase-like protein [Medicago truncatula]
gi|355513225|gb|AES94848.1| Wall-associated receptor kinase-like protein [Medicago truncatula]
Length = 637
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 26 QDFKCSAQTAARCQALVGY-LPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVP 84
+ + C+ +T CQA + + P +++S I SL N + N+ N +
Sbjct: 50 RGYTCNGKTQT-CQAYLTFRTQPIYSSVSTISSLLG-SNPSQLAEINS----VSLNETFE 103
Query: 85 AQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
K + VP++C CS ++ Y + D +A F L Q ++ N+ NP
Sbjct: 104 TNKMVIVPVNCSCSGNYYQAN--TSYVFQNTDTYFIVANNTFEGLSTCQALMHENH--NP 159
Query: 145 DLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLN 200
+ G+ L +PL C+C + K + Y +++V+ G S + I+ KFG + T ++ N
Sbjct: 160 GDVYPGRKLLVPLRCACPTKNQTQKNIKYLLSYLVDWGDSVSFISDKFGVNFRTTLEAN 218
>gi|302385807|ref|YP_003821629.1| peptidoglycan-binding lysin domain-containing protein [Clostridium
saccharolyticum WM1]
gi|302196435|gb|ADL04006.1| Peptidoglycan-binding lysin domain protein [Clostridium
saccharolyticum WM1]
Length = 220
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIP 156
YTVKK D L IA+T +G + KI AN I NP++I IGQ L IP
Sbjct: 172 YTVKKGDTLWGIAKTFYGNGALFTKIAAANPGIKNPNVISIGQVLVIP 219
>gi|295398640|ref|ZP_06808665.1| endopeptidase LytF [Aerococcus viridans ATCC 11563]
gi|294973128|gb|EFG48930.1| endopeptidase LytF [Aerococcus viridans ATCC 11563]
Length = 518
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 65/167 (38%), Gaps = 33/167 (19%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI-----PLPCSCDD 163
VYT++ D L I+R L ++E N I N DLI G L I P+ S
Sbjct: 32 VYTIETGDTLTAISRKFD---LSIADLLEVNTIDNQDLIFAGHTLNIPTVDAPVVASTKR 88
Query: 164 VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNS 223
V +A V + V G + IA F T L LNGI D L+ G+ L V +
Sbjct: 89 VADATNV---YTVVAGDTLNKIAADFDTTAQNLRDLNGISGDLILV-GQQLKVKGEVAQE 144
Query: 224 S---------------------IKADSFDNYLRVANGTYTFTANSCV 249
+ + ++ +NY+ NG YT A +
Sbjct: 145 TTVEQTAPVAEETVETEVEATPVVEETVNNYVADENGIYTVVAGDSI 191
>gi|416357767|ref|ZP_11682141.1| hypothetical protein CBCST_13387 [Clostridium botulinum C str.
Stockholm]
gi|338194845|gb|EGO87218.1| hypothetical protein CBCST_13387 [Clostridium botulinum C str.
Stockholm]
Length = 211
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
YTVKK D L IA+ +G ++Y+ I NNI NP+LI GQ L +
Sbjct: 166 YTVKKGDCLWNIAKRFYGNGMRYKSIARKNNIKNPNLIYPGQVLNL 211
>gi|338209548|ref|YP_004653595.1| peptidoglycan-binding lysin domain-containing protein [Runella
slithyformis DSM 19594]
gi|336303361|gb|AEI46463.1| Peptidoglycan-binding lysin domain protein [Runella slithyformis
DSM 19594]
Length = 152
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+ VKK D L IA+ +G ++KY I EAN +S+PD I GQ L IP
Sbjct: 102 HEVKKGDTLSLIAKEYYGDMMKYPVIFEANKPMLSHPDKIYPGQILRIP 150
>gi|323702005|ref|ZP_08113674.1| cell wall hydrolase SleB [Desulfotomaculum nigrificans DSM 574]
gi|323533091|gb|EGB22961.1| cell wall hydrolase SleB [Desulfotomaculum nigrificans DSM 574]
Length = 280
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP---------LPCS 160
YTV D L I++ + I AN + DLI GQ L IP +P +
Sbjct: 31 YTVVPGDSLYSISQKFH---VTVNDIRSANGVKG-DLIYPGQVLNIPDGKATSSPAVPVN 86
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
N+ +VV+ G S LIAQK+ T + LM +N + S ++ G+ L+VP+ A
Sbjct: 87 AQTHQNSSF----YVVKPGDSLYLIAQKYNTTVEALMAVNNLQ-SSLIVPGQQLNVPVAA 141
>gi|255536947|ref|XP_002509540.1| ATP binding protein, putative [Ricinus communis]
gi|223549439|gb|EEF50927.1| ATP binding protein, putative [Ricinus communis]
Length = 681
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 60 TVKNLRSILGANNFPPGTPRNFS-----VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKK 114
++ NL LG N F FS +P +P+ +PI C C NG +V T+K
Sbjct: 67 SLSNLSFYLGFNRFVIAEANGFSADTEFLPKDQPLLIPIDCKC-NGNFFRAEVTKTTIKG 125
Query: 115 DDGLDFIARTIFGQLLKYQKIVEANNIS-NPDLIQIGQNLTIPLPCSC---DDVDNAKVV 170
++ IA ++ G L K ++ NN+ +P + L +PL C+C V A
Sbjct: 126 ENFYG-IAESLEG--LTTCKAIQENNLGVSPWNLADKARLLVPLRCACPSSSQVTLATRF 182
Query: 171 HYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
++ V EG + + IA KF T + ++ N
Sbjct: 183 LLSYPVSEGDTISNIAIKFNTTPEAIISAN 212
>gi|307268854|ref|ZP_07550221.1| LysM domain protein, partial [Enterococcus faecalis TX4248]
gi|306514858|gb|EFM83406.1| LysM domain protein [Enterococcus faecalis TX4248]
Length = 138
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 96 ICSNGTGVSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL 153
+ + T V DK P + V+ + L IA +G YQ + N +SNP+LI GQ L
Sbjct: 29 LLPDATAVPDKQPESTHVVQYGETLSSIAYQ-YGT--DYQILASLNGLSNPNLIYPGQVL 85
Query: 154 TIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
+ N V A+ V+ G + + IA K GT L + NG+ + + + G+
Sbjct: 86 KV----------NGSAVSNAYTVQYGDNLSSIAAKLGTTYQALAQRNGLANPNLIYPGQT 135
Query: 214 LD 215
L+
Sbjct: 136 LN 137
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNY 233
HVV+ G + + IA ++GTD L LNG+ + + + G+ L V A +++ DN
Sbjct: 45 HVVQYGETLSSIAYQYGTDYQILASLNGLSNPNLIYPGQVLKVNGSAVSNAYTVQYGDNL 104
Query: 234 LRVA 237
+A
Sbjct: 105 SSIA 108
>gi|302823168|ref|XP_002993238.1| hypothetical protein SELMODRAFT_21370 [Selaginella moellendorffii]
gi|300138908|gb|EFJ05659.1| hypothetical protein SELMODRAFT_21370 [Selaginella moellendorffii]
Length = 448
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 126 FGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCD--DVDNAKVVHYAHVVEEGSSFA 183
F L + I EA + + + I G N+ +P+ CSC DVD + + +VV+ G + +
Sbjct: 1 FQGLTRDDWIAEATPLKDKNTIFAGLNVKVPVNCSCGNPDVDRSYGLFATYVVQPGDTLS 60
Query: 184 LIAQKFGT-DRDTLMKLNGIHDDSKLIAGEPLDVPLKACNS----SIKADSFDNYLRVAN 238
I+ +F D+ L + N D +LIA + VP K + S A S + LR A+
Sbjct: 61 TISARFKVPDQQLLQRFNPHIDFQRLIAQSIVFVPAKDEKNDRLPSPVASSTVSALRKAS 120
Query: 239 GTYT 242
GT T
Sbjct: 121 GTPT 124
>gi|290490570|dbj|BAI79272.1| LysM type receptor kinase [Lotus japonicus]
Length = 665
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 34/220 (15%)
Query: 5 QLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNL 64
Q K +LL T S + T+ C + + + P K T++EIQS+F V
Sbjct: 8 QWKFLLLFLVFIHFKRTSSYPMEPMNCTDTSRVCTSFMAFKPQPKQTLAEIQSMFDV--- 64
Query: 65 RSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVP--VYTVKKDDG--LDF 120
P + +V + I CS G+ V +TVK ++G D
Sbjct: 65 ------------LPGDITVEGNGWDYMFIRKNCSCAAGIKKYVSNTTFTVKSNEGWVYDL 112
Query: 121 IARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHY--AHVVEE 178
+ G ++ A N G +++ L C C ++ + +Y ++V+ +
Sbjct: 113 VMDAYDGLVILPNTTRRARN---------GAVISLRLFCGC----SSGLWNYLMSYVMTD 159
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
G S +A +FG ++ +NGI D + G +P+
Sbjct: 160 GDSVESLASRFGVSMGSIESVNGIGDPDNVTVGSLYYIPM 199
>gi|424705218|ref|ZP_18141299.1| LysM domain protein, partial [Enterococcus faecalis ERV63]
gi|402379860|gb|EJV13642.1| LysM domain protein, partial [Enterococcus faecalis ERV63]
Length = 183
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 81 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 132
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L+
Sbjct: 133 -----NGLVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQSLN 182
>gi|390956466|ref|YP_006420223.1| LysM domain-containing protein [Terriglobus roseus DSM 18391]
gi|390411384|gb|AFL86888.1| LysM domain-containing protein [Terriglobus roseus DSM 18391]
Length = 130
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
YTVK D L +A+ +G Y IV+AN+++NPD ++ G+ LTIP+
Sbjct: 81 YTVKPGDMLSKVAQHFYGDGNLYPLIVKANSLANPDALKAGEKLTIPV 128
>gi|333922756|ref|YP_004496336.1| cell wall hydrolase SleB [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333748317|gb|AEF93424.1| cell wall hydrolase SleB [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 280
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP---------LPCS 160
YTV D L I++ + I AN + DLI GQ L IP +P +
Sbjct: 31 YTVVPGDSLYSISQKFH---VTVNDIRSANGVKG-DLIYPGQVLNIPDGKATSSPAVPVN 86
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
N+ +VV+ G S LIAQK+ T + LM +N + S ++ G+ L+VP+ A
Sbjct: 87 AQTHQNSSF----YVVKPGDSLYLIAQKYNTTVEALMAVNNLQ-SSLIVPGQQLNVPVAA 141
>gi|290490586|dbj|BAI79280.1| LysM type receptor kinase [Lotus japonicus]
Length = 672
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 60 TVKNLRSILGANNFPPGTPRNFS-----VPAQKPIKVPIHCICSNGTGVSDKVPVYTVKK 114
++ NL LG N F FS +P P+ +PI C C G ++ T+K
Sbjct: 69 SLSNLTFYLGLNRFVIAEANGFSAETEFLPQNHPLLIPIDCRC-KGEFFQAELTKTTIKG 127
Query: 115 DDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAH 174
+ IA ++ G L + I E N +P + L IPL C+C +++ ++
Sbjct: 128 ESFYS-IAESLEG-LTTCKAIRENNPDVSPWNLDDNLRLIIPLRCACPFSSEPRIL-LSY 184
Query: 175 VVEEGSSFALIAQKFGTDRDTLMKLNGI 202
+V EG + + +A KF ++ ++ N I
Sbjct: 185 IVREGDTISNLASKFNITKEAIVSANNI 212
>gi|408379324|ref|ZP_11176918.1| hypothetical protein QWE_17048 [Agrobacterium albertimagni AOL15]
gi|407746808|gb|EKF58330.1| hypothetical protein QWE_17048 [Agrobacterium albertimagni AOL15]
Length = 685
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 112 VKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+++ D L I+R ++GQ ++Y I AN I+NPDLI+ GQ T+P D + NA+
Sbjct: 618 IRRGDTLWQISRRVYGQGVRYTTIYLANENQINNPDLIEPGQIFTVP----RDALPNAEE 673
Query: 170 VHYAHVVEE 178
+H + E
Sbjct: 674 IHRKRLRGE 682
>gi|320160621|ref|YP_004173845.1| hypothetical protein ANT_12110 [Anaerolinea thermophila UNI-1]
gi|319994474|dbj|BAJ63245.1| hypothetical protein ANT_12110 [Anaerolinea thermophila UNI-1]
Length = 517
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 57 SLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVP-------- 108
S+F ++ + + PPGTP+ P + PI P + +P
Sbjct: 38 SIFDIRAVSTPQPTLFVPPGTPQLVETPVEIPISTPAMQ-------AEEDIPPFEPTPQP 90
Query: 109 -VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
Y V++ D L IAR L ++ AN +SNPD I +GQ L IP+
Sbjct: 91 KTYIVQQGDTLGNIARQFNVDL---ALLIAANKLSNPDRIDVGQELIIPM 137
>gi|188534659|ref|YP_001908456.1| LysM domain-containing protein [Erwinia tasmaniensis Et1/99]
gi|188029701|emb|CAO97580.1| Putative LysM domain containing protein [Erwinia tasmaniensis
Et1/99]
Length = 147
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I+++++G +Y KI EAN +S+PD I GQ L IP
Sbjct: 98 YTVKSGDTLSAISKSVYGDANQYNKIFEANKPMLSHPDKIYPGQKLRIP 146
>gi|424721167|ref|ZP_18150261.1| LysM domain protein, partial [Enterococcus faecalis ERV72]
gi|402391837|gb|EJV25115.1| LysM domain protein, partial [Enterococcus faecalis ERV72]
Length = 197
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 95 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 146
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L+
Sbjct: 147 -----NGLVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQSLN 196
>gi|451817614|ref|YP_007453815.1| LysM domain-containing protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783593|gb|AGF54561.1| LysM domain-containing protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 225
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV + D L IA+ G +Y +I NNISNPD+I +GQ L +P
Sbjct: 179 YTVIEGDTLWHIAKRFLGDGNRYGEIAALNNISNPDIIYVGQVLNLP 225
>gi|424725476|ref|ZP_18154171.1| LysM domain protein, partial [Enterococcus faecalis ERV73]
gi|402391674|gb|EJV24960.1| LysM domain protein, partial [Enterococcus faecalis ERV73]
Length = 182
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 80 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 131
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L+
Sbjct: 132 -----NGLVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQSLN 181
>gi|410583930|ref|ZP_11321035.1| spore coat assembly protein SafA [Thermaerobacter subterraneus DSM
13965]
gi|410504792|gb|EKP94302.1| spore coat assembly protein SafA [Thermaerobacter subterraneus DSM
13965]
Length = 345
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNA 167
+YTV+ D L IA+ FG + Q ++ AN I NP LI GQ + +P +
Sbjct: 72 IYTVQPGDTLFLIAQR-FG--VTLQALIAANPQIPNPSLIFPGQQICVPTGVTLPPPPPC 128
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG-IHDDSKLIAGEPLDVPL 218
+ + V+ G + LIAQ+FG L+ N I + S + G+ + VP+
Sbjct: 129 PN-GFIYTVQPGDTLFLIAQRFGVSLQALIAANPQIPNPSLIFPGQQICVPV 179
>gi|258516576|ref|YP_003192798.1| molybdenum ABC transporter periplasmic molybdate-binding protein
[Desulfotomaculum acetoxidans DSM 771]
gi|257780281|gb|ACV64175.1| molybdenum ABC transporter, periplasmic molybdate-binding protein
[Desulfotomaculum acetoxidans DSM 771]
Length = 335
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YT+ K+D L IA FG + I+ AN I N D I GQ +TIP+ + K
Sbjct: 3 YTIMKNDTLAGIAER-FGTTVS--AIMNANPQIKNQDFIVEGQIITIPVSGAPSPPAGQK 59
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN-GIHDDSKLIAGEPLDVPLKA-----CN 222
++V+ G + I+QK+G + +TL+ N I + + G+ +++P ++
Sbjct: 60 T----YIVQAGDTMFTISQKYGIELETLIAANPQIKNPDLIFPGQVINIPGRSSLTVYAA 115
Query: 223 SSIKADSFDN----YLRVANG---TYTFTANSCVKCQCD 254
+S+K D+F+ YL+ G +Y F A+ ++ + +
Sbjct: 116 ASLK-DAFEELKRLYLKQNPGVDISYNFGASGTLQREIE 153
>gi|378724775|gb|AFC35163.1| LysM-domain containing receptor-like kinase, partial [Melilotus
albus]
Length = 274
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F+V L I A+N +
Sbjct: 28 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSVSPL-PIAKASNIEAEDSK-- 84
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 85 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTNYLEWENFNPG 141
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 142 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 201
Query: 199 LN 200
N
Sbjct: 202 EN 203
>gi|338706019|ref|YP_004672787.1| hypothetical protein TPCCA_0042 [Treponema paraluiscuniculi
Cuniculi A]
gi|335344080|gb|AEH39996.1| hypothetical protein TPCCA_0042 [Treponema paraluiscuniculi
Cuniculi A]
Length = 310
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
KV YTVK+ D L +AR+ + +Y +I E N + NPD I G ++ IP
Sbjct: 258 KVVRYTVKRGDTLWDLARSYYKTPWRYMRIAEFNRLKNPDHIVAGTSIEIP 308
>gi|313680035|ref|YP_004057774.1| peptidase m23 [Oceanithermus profundus DSM 14977]
gi|313152750|gb|ADR36601.1| Peptidase M23 [Oceanithermus profundus DSM 14977]
Length = 387
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 58 LFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDG 117
L RS LG G R+ P Q +KVPI + + V VYTV+ D
Sbjct: 64 LLIAARYRSDLGEIKKLSGLKRDLLKPGQT-LKVPIEVKQKDEPRLPPGVQVYTVRPGDS 122
Query: 118 LDFIARTIFGQL-LKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHV 175
L+ IA GQ L+ +V AN ++++ D + +G L +P + ++
Sbjct: 123 LERIA----GQFGLRIIDLVSANLDLASLDRLSVGTKLFVP------TGERGLLI----T 168
Query: 176 VEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI 225
V EG + IA+++ D L + NG+ + L G+ + +P A ++
Sbjct: 169 VGEGENLETIARRYRIDMARLARANGLDNPLDLKPGDRVLIPGIAAREAM 218
>gi|255320389|ref|ZP_05361573.1| soluble lytic murein transglycosylase [Acinetobacter radioresistens
SK82]
gi|255302584|gb|EET81817.1| soluble lytic murein transglycosylase [Acinetobacter radioresistens
SK82]
Length = 1017
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 99 NGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLP 158
N +G YTVK + L+ IA + + +++ E NN+ + + GQNL IP
Sbjct: 912 NSSGSHRDTERYTVKNGESLNTIASRVG---ISVKELAELNNLESRAGLLRGQNLLIPKT 968
Query: 159 CSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ + V+ G + +A K+G + L ++N I ++L GE + VP
Sbjct: 969 VTS------------YTVKRGDTLIGLANKYGMNTSELAEMNDIQPSTQLRIGEVIKVP 1015
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
K Y V++ D L IA + ++ + NNI+ ++IGQ L +P S D
Sbjct: 790 KTESYKVQRGDTLTSIAAQ---SKVSVSELAQLNNINTGSGVRIGQTLKVPAGASMPD-- 844
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
++V+ G + +A K+ + L LNG++ +S L G+ + +
Sbjct: 845 -------EYIVQPGDTLTSVAGKYHLQVNFLAGLNGLNRNSGLRVGQKIKL 888
>gi|134032232|gb|ABN50364.2| LysM-domain containing receptor-like kinase [Sesbania rostrata]
Length = 630
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
K + VP++C C+ ++ Y + D IA F L Q ++ N+ NP
Sbjct: 102 KLVLVPVNCSCAGQYYQANTS--YVFQNTDTYLLIANNTFEGLSTCQALMHENH--NPGD 157
Query: 147 IQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGIH 203
I G+ L +PL C+C + K + Y +++V+ G S + I+ +FG T ++ N +
Sbjct: 158 IYPGRKLMVPLRCACPTKNQTEKGIKYLLSYLVDWGDSVSFISNRFGVKTKTTLEANTLS 217
Query: 204 DDSKLIAGEPLDVPLKACNSS 224
S + L VPL SS
Sbjct: 218 LTSIIYPFTTLLVPLHDKPSS 238
>gi|452966741|gb|EME71749.1| metalloendopeptidase-like membrane protein, partial
[Magnetospirillum sp. SO-1]
Length = 326
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 120 FIARTIFGQLLKY----QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHV 175
+ T++G +Y + ++EAN++ P +Q G L +P V +HV
Sbjct: 41 YAGDTVYGIARRYSLAVRDLIEANSLQPPYQLQPGTVLRLPG------------VGSSHV 88
Query: 176 VEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V++G + +++A++F D +TL NG L GE L +P
Sbjct: 89 VQKGDTLSVLARRFKVDFNTLAATNGKRAPYVLHVGERLTIP 130
>gi|425744933|ref|ZP_18862988.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-323]
gi|425490529|gb|EKU56829.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-323]
Length = 1086
Score = 43.5 bits (101), Expect = 0.17, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 104 SDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDD 163
S K YTV++ D L IA + ++ E NN+ +++GQ+L IP + D
Sbjct: 794 SYKTENYTVQRGDTLSSIATK---SKISLSELAELNNLKTNSGVRLGQSLKIPAGSTVPD 850
Query: 164 VDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL----DVPLK 219
+VV+ G S IA K+ + LNG+ + L G+ L DVP K
Sbjct: 851 ---------QYVVQSGDSLNAIAAKYNLQLSYVADLNGLERTAGLRVGQRLKLTGDVPAK 901
Query: 220 AC---NSSIKADSFDNYLRVANG 239
N+ + DS V +G
Sbjct: 902 TATGSNTKSREDSTPEVYTVKSG 924
>gi|345105366|gb|AEN71536.1| LysM-domain containing receptor-like kinase [Melilotus dentatus]
Length = 275
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 29 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 85
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 86 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYSILSTISYQNLTNYLEWENFNPG 142
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 143 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 202
Query: 199 LN 200
N
Sbjct: 203 EN 204
>gi|333896948|ref|YP_004470822.1| cell wall hydrolase SleB [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333112213|gb|AEF17150.1| cell wall hydrolase SleB [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 274
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L I +G Y +I++ NNISN +I GQ L +P DN
Sbjct: 30 YTVKPGDSLYKIGLN-YGT--TYNQIMKLNNISNT-VIYPGQVLVVP------GSDNT-- 77
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDD 205
+ V++G S LIA K+GT D L +NG+ D
Sbjct: 78 ----YTVQKGDSLYLIAMKYGTTVDALKNVNGLTGD 109
>gi|405354594|ref|ZP_11023955.1| LysM domain protein [Chondromyces apiculatus DSM 436]
gi|397092309|gb|EJJ23083.1| LysM domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 130
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLTIP 156
+YTVK D L +A+ I+G + Y KI EAN + +PD I++GQ L +P
Sbjct: 74 LYTVKSGDTLSKLAKDIYGDMKLYPKIFEANKDQLKDPDKIKVGQVLKLP 123
>gi|269836237|ref|YP_003318465.1| peptidase M23 [Sphaerobacter thermophilus DSM 20745]
gi|269785500|gb|ACZ37643.1| Peptidase M23 [Sphaerobacter thermophilus DSM 20745]
Length = 363
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
+++ AN+ NPDLI GQ++ IP + V V V+ G + L+AQ++G
Sbjct: 101 HEVIAANDFPNPDLIYPGQHVNIPGEDAEGGVGGGLTVE----VKPGDTVFLLAQRYGVS 156
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVP 217
++++ N + + + G+ L +P
Sbjct: 157 MESIIAANKLANPHLIYPGDVLTIP 181
>gi|218132560|ref|ZP_03461364.1| hypothetical protein BACPEC_00419 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992286|gb|EEC58289.1| LysM domain protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 450
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 103 VSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VS Y V + D L I +T +G KY+ I+E N + NPD I IGQ L +P
Sbjct: 397 VSQPARTYIVVQGDTLMSICKTAYGDTQKYKDIMEINRMDNPDKIFIGQELLLP 450
>gi|421465616|ref|ZP_15914303.1| LysM domain protein [Acinetobacter radioresistens WC-A-157]
gi|400203883|gb|EJO34868.1| LysM domain protein [Acinetobacter radioresistens WC-A-157]
Length = 333
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 99 NGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLP 158
N +G YTVK + L+ IA + + +++ E NN+ + + GQNL IP
Sbjct: 228 NSSGSHRDTERYTVKNGESLNTIASRVG---ISVKELAELNNLESRAGLLRGQNLLIPKT 284
Query: 159 CSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ ++ V+ G + +A K+G + L ++N I ++L GE + VP
Sbjct: 285 VT------------SYTVKRGDTLIGLANKYGMNTSELAEMNDIQPSTQLRIGEVIKVP 331
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
K Y V++ D L IA + ++ + NNI+ ++IGQ L +P S D
Sbjct: 106 KTESYKVQRGDTLTSIAAQ---SKVSVSELAQLNNINTGSGVRIGQTLKVPAGASMPD-- 160
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
++V+ G + +A K+ + L LNG++ +S L G+ + +
Sbjct: 161 -------EYIVQPGDTLTSVAGKYHLQVNFLAGLNGLNRNSGLRVGQKIKL 204
>gi|398938999|ref|ZP_10668218.1| putative phospholipid-binding protein [Pseudomonas sp. GM41(2012)]
gi|398164635|gb|EJM52765.1| putative phospholipid-binding protein [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
TVKK D L IA+ +G KY KI EAN +S+PD I GQ+L IP
Sbjct: 98 TVKKGDTLSAIAKAEYGDANKYNKIFEANKPMLSHPDKIYPGQSLRIP 145
>gi|378724781|gb|AFC35166.1| LysM-domain containing receptor-like kinase, partial [Melilotus
albus]
Length = 274
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F+V L I A+N +
Sbjct: 28 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSVSPL-PIAKASNIEAEDSK-- 84
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 85 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTNYLEWENFNPG 141
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 142 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 201
Query: 199 LN 200
N
Sbjct: 202 EN 203
>gi|332980907|ref|YP_004462348.1| peptidoglycan-binding lysin domain-containing protein [Mahella
australiensis 50-1 BON]
gi|332698585|gb|AEE95526.1| Peptidoglycan-binding lysin domain protein [Mahella australiensis
50-1 BON]
Length = 178
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKY----QKIVEANNISNPDLIQIGQNLTIPLPCSCDDV 164
+YT++ D TI+ L++ I+ AN NPD +QIGQ + IP
Sbjct: 19 IYTIQPGD-------TIYRLSLRFNVSMDAILRANPGINPDNLQIGQQICIPAGTPVPQC 71
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN-GIHDDSKLIAGEPLDVPLK 219
N + +V+ +G + +AQ+FG D+++ N GI+ D+ L G+ + +P+K
Sbjct: 72 PNGIL----YVIRQGDTLYRLAQRFGISVDSIIAANPGINPDN-LQIGQVICIPIK 122
>gi|156975483|ref|YP_001446391.1| membrane-bound lytic murein transglycosylase D [Vibrio harveyi ATCC
BAA-1116]
gi|156527077|gb|ABU72163.1| hypothetical protein VIBHAR_03214 [Vibrio harveyi ATCC BAA-1116]
Length = 528
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
P P +P +K + + G G+ KV Y VK+ D L +A+ +G K
Sbjct: 313 PDGPHQLLIPIEKKDQFLAQVKKNRGKGM--KVARYKVKRGDSLSVLAQK-YGTTTKV-- 367
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH---------------YAHVVEEG 179
I AN ++N + I++GQ L IP + DD A HVV+ G
Sbjct: 368 IQRANGLTNNN-IRVGQYLMIPT-STKDDAKYALTAENRLNKTQSKSRGQFKLTHVVQPG 425
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
S IA++ +L K NG+ L G+ L
Sbjct: 426 ESLWSIAKENKVSHKSLAKWNGMGPKDTLRIGQKL 460
>gi|297180518|gb|ADI16731.1| FOG: lysm repeat-protein [uncultured Verrucomicrobiales bacterium
HF0010_05E02]
Length = 306
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VKK D L IA + ++ ANN+ N DLIQ+GQ LTIP + + +
Sbjct: 33 YKVKKGDTLGKIALRLN---TSTSELKRANNL-NSDLIQVGQKLTIPTSGNTNLAGYNPI 88
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSS 224
++V +G + IAQ+ L N + D L+ G+ L +P A +
Sbjct: 89 AMSNYIVVKGDTLGKIAQRHAISIHELKAANNLSRDLILV-GQNLRIPRSAVRQT 142
>gi|159902908|ref|YP_001550252.1| hypothetical protein P9211_03671 [Prochlorococcus marinus str. MIT
9211]
gi|159888084|gb|ABX08298.1| Hypothetical protein P9211_03671 [Prochlorococcus marinus str. MIT
9211]
Length = 287
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 37/178 (20%)
Query: 51 TISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVP-----------IHCICSN 99
T+S+I SL+ V ++RSI+ N ++ + IK+P I I +
Sbjct: 30 TLSKIASLYEV-SIRSIMDLNQIYDAD----ALQVGQRIKLPENAKSSLIASDISHIVKS 84
Query: 100 GTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP--- 156
G + + Y VK +D I+ N I+NP+ + IGQ L +P
Sbjct: 85 GESIEEIASNYNVKGED------------------IIRLNRINNPNYLYIGQKLIMPQGA 126
Query: 157 LPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
L + + K HV+ +G S +I++ + L+ N I++ + + G L
Sbjct: 127 LGQRTSNSNKKKSYKAYHVISKGESLGMISKAYNIPIKDLISNNNIYNPNVIQPGSKL 184
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK----VVHYAHVVEEGSSFALIAQK 188
+ I++ N I + D +Q+GQ + +P +NAK +H+V+ G S IA
Sbjct: 43 RSIMDLNQIYDADALQVGQRIKLP--------ENAKSSLIASDISHIVKSGESIEEIASN 94
Query: 189 FGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA----CNSSIKADSFDNYLRVANG 239
+ + +++LN I++ + L G+ L +P A ++S K S+ Y ++ G
Sbjct: 95 YNVKGEDIIRLNRINNPNYLYIGQKLIMPQGALGQRTSNSNKKKSYKAYHVISKG 149
>gi|392377409|ref|YP_004984568.1| protein of unknown function [Azospirillum brasilense Sp245]
gi|356878890|emb|CCC99782.1| protein of unknown function [Azospirillum brasilense Sp245]
Length = 501
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
++E N++S P +Q+GQ L +P V ++V+ G + I++ F D
Sbjct: 98 LLEVNHLSPPYQLQVGQRLVLP-------------VSRQYIVQRGDTLYGISRMFSADMS 144
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
L +LNG+ + AG+PL +P
Sbjct: 145 ELTRLNGLTAPYAVQAGQPLRLP 167
>gi|261417367|ref|YP_003251050.1| Lytic transglycosylase catalytic [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385789283|ref|YP_005820406.1| putative membrane-bound lytic murein transglycosylase D
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373823|gb|ACX76568.1| Lytic transglycosylase catalytic [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327771|gb|ADL26972.1| putative membrane-bound lytic murein transglycosylase D
[Fibrobacter succinogenes subsp. succinogenes S85]
Length = 792
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 100 GTGVSDKVPV-----YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLT 154
T S K PV YTV+ D L I++ + + + E N SN I++GQ L
Sbjct: 668 ATKTSKKAPVNTTIIYTVEPGDNLFAISKKFSTTVAAIRDMNEMGNSSN---IKVGQKLK 724
Query: 155 IPLPCSCDDVDNA-KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD 204
IP S +A KV HVV++G I++++G + ++K NG+ D
Sbjct: 725 IP--GSAAPAPSAPKVEEITHVVKKGEGLWDISRQYGVTIEDIVKWNGLKD 773
>gi|397661921|ref|YP_006502621.1| putative cell wall degrading peptidase [Taylorella equigenitalis
ATCC 35865]
gi|394350100|gb|AFN36014.1| putative cell wall degrading peptidase [Taylorella equigenitalis
ATCC 35865]
gi|399115763|emb|CCG18566.1| putative cell wall degrading peptidase [Taylorella equigenitalis
14/56]
Length = 229
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 160 SCDDVDNAKVVHYA-----HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
+C NA V Y H VE G + +LIA+K+ T + L +LN I D S++ G+ L
Sbjct: 20 ACTSTHNAPVEDYTQTYPPHTVERGETLSLIARKYNTSVEELARLNNIQDISRIFPGQVL 79
Query: 215 DVPLKA 220
+ K+
Sbjct: 80 RISAKS 85
>gi|229156097|ref|ZP_04284196.1| Cell wall hydrolase [Bacillus cereus ATCC 4342]
gi|228627418|gb|EEK84146.1| Cell wall hydrolase [Bacillus cereus ATCC 4342]
Length = 265
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
P+ + + SN G + VYTV+K+D L+ I++ + Q + + NN +N D I
Sbjct: 11 PLSAAMITVVSNPVGTAAST-VYTVQKNDTLEAISKQY---EVSVQSLKQENNKAN-DQI 65
Query: 148 QIGQNLTIPLPCSCDDV---DNAKV----VHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
IG+ LTIP+ + + +N+ V + V+ G + + I+Q++ +L + N
Sbjct: 66 NIGERLTIPISSTANKYVQKNNSPVSTNTYQAIYQVKSGDTLSSISQQYKVSIQSLKQNN 125
Query: 201 GIHDDSKLIAGEPLDV 216
+ D++ + G+ L +
Sbjct: 126 KV-DENHIFVGQHLKI 140
>gi|297617242|ref|YP_003702401.1| NLP/P60 protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145079|gb|ADI01836.1| NLP/P60 protein [Syntrophothermus lipocalidus DSM 12680]
Length = 291
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS--------- 160
Y VK D L IA+ +G + K++ NN+ + L QIG L +P S
Sbjct: 28 YVVKSGDSLWGIAKK-YGTSV--DKLIALNNLKSERL-QIGDKLRLPSATSEISSASTRN 83
Query: 161 -CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
N + +VV++G S IA++ GT LM+LNG+ D KL G+ L V
Sbjct: 84 PVSRGSNRSISTKEYVVQKGDSLWSIARRCGTTVQELMRLNGLQSD-KLKPGDKLVV 139
>gi|256830492|ref|YP_003159220.1| lytic transglycosylase subunit [Desulfomicrobium baculatum DSM
4028]
gi|256579668|gb|ACU90804.1| Lytic transglycosylase catalytic [Desulfomicrobium baculatum DSM
4028]
Length = 547
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 135 IVEANNISNPDLIQIGQNLTIP---LPCSCDDVDNAKVV---HYAHVVEEGSSFALIAQK 188
+ +ANN S +++GQ+L IP L V +A+ ++V +G + IA++
Sbjct: 391 LQKANNGSRTKTLRVGQSLRIPGRGLASESGSVADARKWASKRANYLVRQGDTLWSIAKQ 450
Query: 189 FGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
F TD +L+K NG+ S L G+ L VP
Sbjct: 451 FKTDPSSLLKANGLKSSSVLKIGQKLYVP 479
>gi|148362073|gb|ABQ59613.1| NFR5b [Glycine max]
Length = 515
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 91 VPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIG 150
+P+ C C+ ++ Y + D +F+A T + L ++ +++ N +P+ + IG
Sbjct: 16 IPVTCGCTGNRSFAN--ISYEINPGDSFNFVATTSYENLTNWRVVMDLNPSLSPNTLPIG 73
Query: 151 QNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSK 207
+ PL C C + +D +V + + +L+++KFG + ++ N +
Sbjct: 74 IQVVFPLFCKCPSKNQLDKGIKYLITYVWQPSDNVSLVSEKFGASPEDILSENNYGQNFT 133
Query: 208 LIAGEPLDVPL 218
P+ +P+
Sbjct: 134 AANNLPVLIPV 144
>gi|424047426|ref|ZP_17784985.1| lysM domain protein [Vibrio cholerae HENC-03]
gi|408883919|gb|EKM22682.1| lysM domain protein [Vibrio cholerae HENC-03]
Length = 528
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
P P +P +K + + G G+ KV Y VK D L +A+ +G K
Sbjct: 313 PNGPHQLLIPIEKKDQFLAQVKKNRGKGM--KVARYQVKSGDSLSVLAQK-YGTTTKV-- 367
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH---------------YAHVVEEG 179
I AN + N + I++GQ L IP + DD A HVV+ G
Sbjct: 368 IQRANGLKNSN-IRVGQYLMIPT-STKDDAKYALTAENRLNKTQSQARGQFKLTHVVQSG 425
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
S IA++ +L K NG+ L G+ L
Sbjct: 426 ESLWSIAKENKVSHKSLAKWNGMGPKDTLRVGQKL 460
>gi|422690694|ref|ZP_16748741.1| LysM domain protein, partial [Enterococcus faecalis TX0630]
gi|315576385|gb|EFU88576.1| LysM domain protein [Enterococcus faecalis TX0630]
Length = 106
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 4 VPDKQPEATHVVQYGETLSSIAYQ-YGT--DYQTLAALNGLANPNLIYPGQVLKV----- 55
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
N VV + V+ G + + IA K GT L LNG+ + + + G+ L+
Sbjct: 56 -----NGSVVSNVYTVQYGDNLSNIAAKLGTTYQALAALNGLANPNLIYPGQTLN 105
>gi|319779694|ref|YP_004130607.1| lipoprotein NlpD [Taylorella equigenitalis MCE9]
gi|317109718|gb|ADU92464.1| Lipoprotein NlpD [Taylorella equigenitalis MCE9]
Length = 229
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 160 SCDDVDNAKVVHYA-----HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
+C NA V Y H VE G + +LIA+K+ T + L +LN I D S++ G+ L
Sbjct: 20 ACTSTHNAPVEDYTQTYPPHTVERGETLSLIARKYNTSVEELARLNNIQDISRIFPGQVL 79
Query: 215 DVPLKA 220
+ K+
Sbjct: 80 RISAKS 85
>gi|453051161|gb|EME98676.1| hypothetical protein H340_20338 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 174
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV D L +A +G +Y+ I A+ I NPD++ +GQ LTIP
Sbjct: 128 YTVAPGDTLWAVAERFYGDGNRYRDIAAASGIDNPDVVSVGQVLTIP 174
>gi|403050836|ref|ZP_10905320.1| LysM domain protein [Acinetobacter bereziniae LMG 1003]
Length = 1095
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK + L+ IA + L Q++ E N++S +Q GQ++ IP V
Sbjct: 1001 YAVKAGESLNVIASRVG---LSVQELAEMNDLSPRAGLQRGQSIRIP----------KTV 1047
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
Y V+ G S +A KFG D L ++N + ++ L G + VP
Sbjct: 1048 TEYK--VKSGDSLIRLASKFGIDTGALAEMNDLKPNAALRIGSIIKVP 1093
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 16/132 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L +A L+ +I E N ++ + +GQ L + D A
Sbjct: 854 YTVQSGDSLIAVANKYN---LQVNQIAELNGLTTTSGLLVGQKLKLTGTPESSAKDRAHS 910
Query: 170 VHYA---------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL----DV 216
A HVV+ G + A IA+K+ L LNG+ + L G+ L D+
Sbjct: 911 KSEAKSEASSKDIHVVKSGETLASIAKKYKLQLSYLSDLNGLSRNQALDVGQRLKIDGDL 970
Query: 217 PLKACNSSIKAD 228
P K+ S K D
Sbjct: 971 PSKSSLSKEKED 982
>gi|378724797|gb|AFC35174.1| LysM-domain containing receptor-like kinase, partial [Melilotus
albus]
Length = 274
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 15/197 (7%)
Query: 9 VLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRS 66
+L+ FT +ALS F C A + C+ V Y PN + + I +F++ L +
Sbjct: 17 LLVFFTNISALS----GTKFTCPADSPPSCETYVTYRAKSPNFLSPTNISDIFSMSPLPT 72
Query: 67 ILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIF 126
+N + +P Q + +P+ C C+ ++ YT+K+ D ++ +
Sbjct: 73 AKASNIEAEDSKL---IPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISY 126
Query: 127 GQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFA 183
L Y + N P L+ + +PL C C + K + Y +V + +
Sbjct: 127 QNLTNYLEWENFNPGLRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVT 186
Query: 184 LIAQKFGTDRDTLMKLN 200
L++ KFG + ++ N
Sbjct: 187 LVSSKFGASQADMLTEN 203
>gi|440287579|ref|YP_007340344.1| putative phospholipid-binding protein,LysM domain-containing
protein [Enterobacteriaceae bacterium strain FGI 57]
gi|440047101|gb|AGB78159.1| putative phospholipid-binding protein,LysM domain-containing
protein [Enterobacteriaceae bacterium strain FGI 57]
Length = 147
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 104 SDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+D+ YTVK D L I++ ++G Y KI EAN +S+PD I GQ L IP
Sbjct: 91 ADEATYYTVKSGDTLSAISKNVYGNANLYNKIFEANRPMLSHPDKIYPGQTLRIP 145
>gi|326804610|ref|YP_004327481.1| conserved uncharacterised protein [Salmonella phage Vi01]
gi|301795260|emb|CBW37978.1| conserved uncharacterised protein [Salmonella phage Vi01]
Length = 102
Score = 43.1 bits (100), Expect = 0.21, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLP 158
Y VK D L IA ++G +Y KI NNI NP I +GQ + +P P
Sbjct: 5 YIVKPGDTLSSIALKLYGDAQQYIKIARFNNIQNPGHITVGQVICLPTP 53
>gi|126640876|ref|YP_001083860.1| peptidoglycan-binding LysM [Acinetobacter baumannii ATCC 17978]
gi|213156605|ref|YP_002318266.1| peptidoglycan-binding LysM, partial [Acinetobacter baumannii
AB0057]
gi|213055765|gb|ACJ40667.1| peptidoglycan-binding LysM [Acinetobacter baumannii AB0057]
Length = 108
Score = 43.1 bits (100), Expect = 0.21, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L IA+ +G +YQKI EAN + +PD I GQ L IP
Sbjct: 59 YTVKSGDNLSKIAKEFYGDANQYQKIFEANKPMLKDPDEIFPGQVLRIP 107
>gi|383761887|ref|YP_005440869.1| hypothetical protein CLDAP_09320 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382155|dbj|BAL98971.1| hypothetical protein CLDAP_09320 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 648
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
Y VK D L IAR I+G YQ+I NNI++ + I++GQ L +P
Sbjct: 398 YVVKAGDTLALIARDIYGDFRLYQQICTFNNIADCNRIEVGQVLNLP 444
>gi|357513513|ref|XP_003627045.1| Protein kinase family protein [Medicago truncatula]
gi|355521067|gb|AET01521.1| Protein kinase family protein [Medicago truncatula]
Length = 667
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 6 LKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLR 65
L+ VL LF + S+ + C+ T C + + Y P ++ IQS+F V
Sbjct: 12 LQFVLFLFYLNFNRSSSNQMAPMNCT-DTRRVCTSFLAYKPQQNQSLGVIQSMFDV---- 66
Query: 66 SILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVP--VYTVKKDDGL--DFI 121
P + +V + I CS +G+ V +TVK ++G D +
Sbjct: 67 -----------LPSDITVEGNGWDYIFIRKNCSCASGIKKYVSNTTFTVKTNEGFVDDLV 115
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHY--AHVVEEG 179
G +L +A N G +++ L C C ++ + +Y ++V+ +G
Sbjct: 116 MDAYDGLILLPNTSRKARN---------GAVISLRLFCGC----SSGLWNYLLSYVLRDG 162
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
S +A +FG D++ +NG+ + G +PL +
Sbjct: 163 DSVESLASRFGVSMDSIEGVNGLDGPDNVTVGSLYYIPLDS 203
>gi|253576623|ref|ZP_04853951.1| peptidoglycan-binding LysM [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251844037|gb|EES72057.1| peptidoglycan-binding LysM [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 226
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L+ IA F +I+ AN +P+ +QIGQ ++IP SC
Sbjct: 17 YTVQPGDTLNIIA---FRLESSVTRILAANPGLDPNNLQIGQVISIP---SCPPN----- 65
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
H + ++E G + IAQ++G ++++ N D + L G+ L +P
Sbjct: 66 -HVSRIIERGDTLYQIAQEYGVTVASILEANPGVDPNSLRVGQRLCIP 112
>gi|424033749|ref|ZP_17773160.1| lysM domain protein [Vibrio cholerae HENC-01]
gi|424042742|ref|ZP_17780417.1| lysM domain protein [Vibrio cholerae HENC-02]
gi|408873862|gb|EKM13045.1| lysM domain protein [Vibrio cholerae HENC-01]
gi|408887432|gb|EKM26024.1| lysM domain protein [Vibrio cholerae HENC-02]
Length = 528
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 22/155 (14%)
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
P P +P +K + + G GV KV Y VK D L +A+ +G K
Sbjct: 313 PEGPHQLLIPIEKKDQFLAQVKKNRGKGV--KVARYKVKSGDSLSVLAQK-YGTTTKV-- 367
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA--------KVVHYA-------HVVEEG 179
I AN +SN + I++GQ L IP + DD A K+ A H V+ G
Sbjct: 368 IQRANGLSNNN-IRVGQYLMIPT-STKDDSKYALSAENRLNKMQSQARGQYKLTHTVQSG 425
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
S IA++ +L K NG+ L G+ L
Sbjct: 426 ESLWSIARENKVSHKSLAKWNGMGPKDTLRVGQKL 460
>gi|406996211|gb|EKE14651.1| hypothetical protein ACD_12C00363G0003, partial [uncultured
bacterium]
Length = 199
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 74 PPGTPRNFSVPAQKPIKVPIHCICSNG-TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKY 132
P TPR +V I I S+ T V +K Y V+ D L IA+ ++G L +
Sbjct: 125 PQVTPRQSTVGE-------ISAISSDQVTYVENK---YIVQPGDSLSIIAQKVYGDLFAW 174
Query: 133 QKIVEANNISNPDLIQIGQNLTIP 156
KI+ ANN+ PD I+ G L IP
Sbjct: 175 PKIMNANNLLTPDSIEAGMVLIIP 198
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 12/133 (9%)
Query: 97 CSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
N V + Y V++ D L I+ +G I AN IS+ ++IG+ L IP
Sbjct: 66 VKNVIEVKKPLKTYVVQEGDDLWNISEKFYGSGFNAYDISIANKISDSSNLEIGKKLIIP 125
Query: 157 L---------PCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDR---DTLMKLNGIHD 204
S D V ++V+ G S ++IAQK D +M N +
Sbjct: 126 QVTPRQSTVGEISAISSDQVTYVENKYIVQPGDSLSIIAQKVYGDLFAWPKIMNANNLLT 185
Query: 205 DSKLIAGEPLDVP 217
+ AG L +P
Sbjct: 186 PDSIEAGMVLIIP 198
>gi|359770544|ref|ZP_09274018.1| hypothetical protein GOEFS_014_00380 [Gordonia effusa NBRC 100432]
gi|359312346|dbj|GAB16796.1| hypothetical protein GOEFS_014_00380 [Gordonia effusa NBRC 100432]
Length = 963
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+TV D L IA+ +GQ + I AN I++P++I +GQ LT+P D +V
Sbjct: 5 HTVAPGDTLSAIAQRFYGQAGLFGFIAAANRIADPNMINVGQVLTLP--------DLGRV 56
Query: 170 VHYAHVVEEGSSFALIAQKFGTD 192
H V G + + +AQ+F D
Sbjct: 57 ----HPVVAGDTLSGLAQRFYGD 75
>gi|422349975|ref|ZP_16430863.1| hypothetical protein HMPREF9465_01753 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657824|gb|EKB30706.1| hypothetical protein HMPREF9465_01753 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 716
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL--------- 157
V V+TV+K D L IA +++ ++ AN ++ + +++GQ L IP
Sbjct: 538 VRVHTVRKGDTLSEIADHYDVSVVRLKR---ANRLTG-NALRVGQRLEIPTGSEPKAPAV 593
Query: 158 -PCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
P D+ A + + V+ G + IA +FG + L +NG+ S L AG+ L +
Sbjct: 594 QPSRADESPEAGL----YRVKSGDTLYEIAGRFGVSVNALKAVNGL-SGSSLRAGQKLVI 648
Query: 217 PLKACNSSIKADS 229
P A +ADS
Sbjct: 649 PATAKTQPSRADS 661
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 18/121 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+K D L IAR + + IV+AN + + +L ++GQ L + +P +V+ A +
Sbjct: 421 YRVRKGDTLSGIARRWH---ITKKSIVQANRLRSQNL-RVGQRLILTVP----NVERAPI 472
Query: 170 V---------HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
H H V+ G + I++++G L N I ++ + AG+ L +P A
Sbjct: 473 RTVSTDSGAKHVIHAVKAGETLGSISRRYGVSTAILRATNRISGNT-IRAGQRLRIPTVA 531
Query: 221 C 221
Sbjct: 532 S 532
>gi|295688848|ref|YP_003592541.1| peptidase M23 [Caulobacter segnis ATCC 21756]
gi|295430751|gb|ADG09923.1| Peptidase M23 [Caulobacter segnis ATCC 21756]
Length = 622
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 77/203 (37%), Gaps = 30/203 (14%)
Query: 84 PAQKPIKVPIHCICSNGT--GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
PA +P V + G V+ K V+TVK D L IA+ + + E NNI
Sbjct: 282 PAAEPTTVSTTSLSVTGAVVEVAGKRQVHTVKSGDTLTSIAKKFD---VNVNDLAEDNNI 338
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG 201
+++GQ + P A+V + G + A I ++FG L NG
Sbjct: 339 KKGQTLRLGQKIKGPA-----------SEQKAYVAQSGDTLAEIGKRFGVTARALAAENG 387
Query: 202 IHDDSKLIAGEPLDV--------PLKACNSSIK---ADSFDNYLRVANGTYTFTANSCVK 250
+ + + G+ + + PLK + + A+ + Y RV T A S
Sbjct: 388 LRATATIKKGQKIRLPDGFRDKGPLKTTTTVARPAPAEPSNTYARVETPT---PAPSTPS 444
Query: 251 CQCDATNNWTLQCKPSQFQPSSP 273
T ++ P QP SP
Sbjct: 445 APVPYTPSYPRPSAPVAAQPVSP 467
>gi|326202471|ref|ZP_08192340.1| Peptidoglycan-binding lysin domain [Clostridium papyrosolvens DSM
2782]
gi|325987589|gb|EGD48416.1| Peptidoglycan-binding lysin domain [Clostridium papyrosolvens DSM
2782]
Length = 215
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 89 IKVPIHCICSNGTGVSDKVPV----YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
IK P+ I G G PV Y VKK D L I + G KY +I + N I NP
Sbjct: 145 IKYPVEGIKPKG-GTKKSTPVKPKSYKVKKGDTLWGICKKYLGDGSKYPQIAKLNGIKNP 203
Query: 145 DLIQIGQNLTI 155
+LI++GQ + +
Sbjct: 204 NLIRVGQVIKL 214
>gi|220932226|ref|YP_002509134.1| Peptidoglycan-binding LysM [Halothermothrix orenii H 168]
gi|219993536|gb|ACL70139.1| Peptidoglycan-binding LysM [Halothermothrix orenii H 168]
Length = 175
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 148 QIGQ--NLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDD 205
Q GQ NL I +P +D + ++V G + + IA++F TD DTL++LN I D
Sbjct: 109 QPGQIINLPIEIPEPPED-------SFRYIVRRGDTLSAIARRFNTDVDTLVRLNNIGDP 161
Query: 206 SKLIAGEPLDVP 217
+ G L +P
Sbjct: 162 DVIFPGRILIIP 173
>gi|383764409|ref|YP_005443391.1| hypothetical protein CLDAP_34540 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384677|dbj|BAM01494.1| hypothetical protein CLDAP_34540 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 390
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 172 YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
Y HVV EG + A IA +GT +++LN I D ++ AG+ L VP
Sbjct: 182 YVHVVREGETLASIASAYGTSLRRILELNKIADARQVKAGQRLIVP 227
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDN 232
H V G + IA+++ TD TLM+LNGI + + G+ L VP S S
Sbjct: 42 HTVAPGETLTSIARRYDTDVATLMRLNGIQNPELIRVGQRLAVPSNVAGSGAGRSSLQG 100
>gi|93005348|ref|YP_579785.1| LysM domain/BON superfamily protein [Psychrobacter cryohalolentis
K5]
gi|92393026|gb|ABE74301.1| Peptidoglycan-binding LysM [Psychrobacter cryohalolentis K5]
Length = 168
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+YTVK D L IA+ ++G Y KI EAN +S+PD I GQ L IP
Sbjct: 118 MYTVKSGDSLSKIAKDVYGSTGDYMKIFEANKPMLSDPDKIYPGQVLRIP 167
>gi|307275930|ref|ZP_07557063.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX2134]
gi|306507260|gb|EFM76397.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX2134]
Length = 413
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 311 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 362
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L
Sbjct: 363 -----NGSVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQTL 411
>gi|328545119|ref|YP_004305228.1| phospholipid-binding family protein [Polymorphum gilvum
SL003B-26A1]
gi|326414861|gb|ADZ71924.1| Putative phospholipid-binding domain family [Polymorphum gilvum
SL003B-26A1]
Length = 145
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+TVKK D L +A +G KYQKI EAN +S+PD I GQ L IP
Sbjct: 94 HTVKKGDTLWKVAEAAYGDGSKYQKIFEANRPMLSHPDKIYPGQVLRIP 142
>gi|326331496|ref|ZP_08197786.1| putative LysM domain protein [Nocardioidaceae bacterium Broad-1]
gi|325950752|gb|EGD42802.1| putative LysM domain protein [Nocardioidaceae bacterium Broad-1]
Length = 1046
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN---ISNPDLIQIGQNLTIPLPCSCDDVDN 166
Y VK+ D L IA+T G+ +Y +IVE N + PD + G +L IP+ D+
Sbjct: 169 YQVKRGDSLWKIAQTHLGRGSRYTEIVELNREVLATQPDWLIAGTDLLIPV----DEAPE 224
Query: 167 AKVVHYA-HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
+V A +VVE G + + IA+ D D ++ +D+
Sbjct: 225 VEVQETATYVVEPGDTLSEIAETELGDADAYPRIVEASEDT 265
>gi|429331142|ref|ZP_19211908.1| LysM domain/BON superfamily protein [Pseudomonas putida CSV86]
gi|428764115|gb|EKX86264.1| LysM domain/BON superfamily protein [Pseudomonas putida CSV86]
Length = 146
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
TV+K D L I++ ++G KYQKI EAN +S+PD I GQ L IP
Sbjct: 98 TVEKRDTLSAISKRVYGNSNKYQKIFEANKPLLSHPDKIYPGQVLRIP 145
>gi|78212046|ref|YP_380825.1| peptidoglycan-binding LysM [Synechococcus sp. CC9605]
gi|78196505|gb|ABB34270.1| Peptidoglycan-binding LysM [Synechococcus sp. CC9605]
Length = 337
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
++ N I NPDL+Q G L +P P H V G + + IA ++
Sbjct: 46 LMRMNGIRNPDLVQAGSRLRVPGPTVTAGPGR-------HRVNSGETLSSIANRYQVRSR 98
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKAC 221
LM LN + + + + G+ L +P A
Sbjct: 99 DLMALNNLRNANHVEVGQTLRLPSNAV 125
>gi|147678170|ref|YP_001212385.1| hypothetical protein PTH_1836 [Pelotomaculum thermopropionicum SI]
gi|146274267|dbj|BAF60016.1| hypothetical protein PTH_1836 [Pelotomaculum thermopropionicum SI]
Length = 365
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV+ D L IAR FG + +++V+ANNI++PDLI GQ L IP
Sbjct: 5 YTVQPGDTLFLIARR-FGTTV--ERLVQANNIADPDLINAGQVLIIP 48
>gi|91777015|ref|YP_546771.1| LysM domain/BON superfamily protein [Methylobacillus flagellatus
KT]
gi|91711002|gb|ABE50930.1| Peptidoglycan-binding LysM [Methylobacillus flagellatus KT]
Length = 158
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 85 AQKPIKVPIHCICSNGTGVSDKV-----------PV-YTVKKDDGLDFIARTIFGQLLKY 132
A + IK I C N GVS+ V PV YTV + D L IA+ +G Y
Sbjct: 72 ATQEIKEKILLCCGNIHGVSEVVDNLKVTTAETAPVFYTVVRGDTLSKIAKQHYGDANAY 131
Query: 133 QKIVEANN--ISNPDLIQIGQNLTIP 156
KI EAN +++PD I GQ L IP
Sbjct: 132 MKIFEANKPMLTHPDKIYPGQTLRIP 157
>gi|383767901|ref|YP_005446884.1| hypothetical protein PSMK_28280 [Phycisphaera mikurensis NBRC
102666]
gi|381388171|dbj|BAM04987.1| hypothetical protein PSMK_28280 [Phycisphaera mikurensis NBRC
102666]
Length = 208
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 81 FSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN 140
F+ PA + + TG ++TV++ D L IA +G L+Y I+ AN
Sbjct: 128 FASPATARPAYRVGVAPTPATGRPASAALHTVERGDSLWKIAERRYGNGLRYVDILAANP 187
Query: 141 ISNPDLIQIGQNLTIP 156
NPD + IG L +P
Sbjct: 188 GINPDRLTIGDRLVLP 203
>gi|239908943|ref|YP_002955685.1| hypothetical protein DMR_43080 [Desulfovibrio magneticus RS-1]
gi|239798810|dbj|BAH77799.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 306
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 158 PCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
P VD K + Y VE+G + A+IA+KFG D L+ N + D KL AG+ L +P
Sbjct: 33 PAPTVVVDTPKPLTYK--VEKGDTVAVIAKKFGVDGKALLAANNLADAKKLKAGQTLTIP 90
Query: 218 LK 219
K
Sbjct: 91 GK 92
>gi|195952544|ref|YP_002120834.1| Peptidase M23 [Hydrogenobaculum sp. Y04AAS1]
gi|195932156|gb|ACG56856.1| Peptidase M23 [Hydrogenobaculum sp. Y04AAS1]
Length = 353
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 18/113 (15%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL-----IQIGQNLTIPLPCSCDDV 164
Y ++K D +D IA LK+ ++ +NP L + IGQ + IP
Sbjct: 29 YKIRKGDTIDGIA-------LKFHVYTKSIKEANPSLRRHKFLSIGQKICIPYKPK---- 77
Query: 165 DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ + V+ G + +++A++FGT L +LN +H + L AGE + VP
Sbjct: 78 -RPRIPTMGYKVKSGDTLSVLAKRFGTSIRELKELNNLHRNF-LRAGETIKVP 128
>gi|297735221|emb|CBI17583.3| unnamed protein product [Vitis vinifera]
Length = 1305
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
K + VP++C CS S Y VK D +IA F L Q ++ N +
Sbjct: 765 KEVIVPVNCSCSGN--YSQTNTSYVVKNGDYPLWIANNTFQGLSTCQALLNQNPSVSATN 822
Query: 147 IQIGQNLTIPLPCSC-DDVDNAKVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLNGIH 203
+ G ++T+PL C+C + V Y +++V G + + I+ +FG D + ++ N +
Sbjct: 823 LNPGTSITVPLRCACPTKAQSDAGVKYLMSYLVAYGDTVSAISGRFGVDTERTLEANELS 882
Query: 204 DDSKLIAGEPLDVPLK 219
+ + L +PL+
Sbjct: 883 EQDTINPFTTLLIPLQ 898
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 16/127 (12%)
Query: 86 QKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFG-----QLLKYQKIVEANN 140
+K + VP++C CS S Y V+ D IA F Q L+ Q+ N
Sbjct: 119 KKEVIVPVNCSCSGE--FSQANTSYVVQHGDTYLLIANNTFEGLSTCQALRSQRTSLTTN 176
Query: 141 ISNPDLIQIGQNLTIPLPCSCDDVDNAKV-VHY--AHVVEEGSSFALIAQKFGTDRDTLM 197
I G LT+PL C+C + + V V Y +++V G + I+ +FG D +
Sbjct: 177 I------YTGTKLTVPLRCACPTKNQSDVGVKYLMSYLVASGDYVSSISVRFGVDTGMTL 230
Query: 198 KLNGIHD 204
+ N + +
Sbjct: 231 EANELSE 237
>gi|445423929|ref|ZP_21436836.1| transglycosylase SLT domain protein [Acinetobacter sp. WC-743]
gi|444755250|gb|ELW79842.1| transglycosylase SLT domain protein [Acinetobacter sp. WC-743]
Length = 1026
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK + L+ IA + L Q++ E N++S +Q GQ++ IP V
Sbjct: 932 YAVKAGESLNVIASRVG---LSVQELAEMNDLSPRAGLQRGQSIRIP----------KTV 978
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
Y V+ G S +A KFG D L ++N + ++ L G + VP
Sbjct: 979 TEYK--VKSGDSLIRLASKFGIDTGALAEMNDLKPNAALRIGSIIKVP 1024
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 16/132 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L +A L+ +I E N ++ + +GQ L + D A
Sbjct: 785 YTVQSGDSLIAVANKYN---LQVNQIAELNGLTTTSGLLVGQKLKLTGTPESSAKDRAHS 841
Query: 170 VHYA---------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL----DV 216
+ A HVV+ G + A IA+K+ L LNG+ + L G+ L D+
Sbjct: 842 KNEAKSEASSKDIHVVKSGETLASIAKKYKLQLSYLSDLNGLSRNQALDVGQRLKIEGDL 901
Query: 217 PLKACNSSIKAD 228
P K+ S K D
Sbjct: 902 PSKSSFSKEKED 913
>gi|428211409|ref|YP_007084553.1| metalloendopeptidase-like membrane protein [Oscillatoria acuminata
PCC 6304]
gi|427999790|gb|AFY80633.1| metalloendopeptidase-like membrane protein [Oscillatoria acuminata
PCC 6304]
Length = 865
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
+Y V D LD IA + QKIVEAN++++PDL+++ Q L IPL
Sbjct: 374 IYQVSFGDTLDAIA---LSNGVSAQKIVEANSLNDPDLLEVNQTLQIPL 419
>gi|398865288|ref|ZP_10620809.1| putative phospholipid-binding protein [Pseudomonas sp. GM78]
gi|398243606|gb|EJN29189.1| putative phospholipid-binding protein [Pseudomonas sp. GM78]
Length = 149
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLTIP 156
GV+ TV+K D L I++ ++G KYQKI EAN + +PD I GQ L IP
Sbjct: 92 GVAPAAKFVTVEKGDTLSAISKRVYGDPNKYQKIFEANKPQLKHPDKIYPGQVLRIP 148
>gi|152970277|ref|YP_001335386.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|378978828|ref|YP_005226969.1| hypothetical protein KPHS_26690 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|419974494|ref|ZP_14489913.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419979884|ref|ZP_14495172.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419985311|ref|ZP_14500452.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991101|ref|ZP_14506069.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997230|ref|ZP_14512028.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003438|ref|ZP_14518084.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420009088|ref|ZP_14523574.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420015419|ref|ZP_14529720.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420020717|ref|ZP_14534903.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420026094|ref|ZP_14540099.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420032171|ref|ZP_14545988.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420037705|ref|ZP_14551358.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420043470|ref|ZP_14556957.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420049187|ref|ZP_14562496.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420054904|ref|ZP_14568075.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061762|ref|ZP_14574746.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420066835|ref|ZP_14579633.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420071331|ref|ZP_14583978.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420077375|ref|ZP_14589841.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420085687|ref|ZP_14597901.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421913369|ref|ZP_16343055.1| FIG00731387: hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421913968|ref|ZP_16343630.1| FIG00731387: hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|425076710|ref|ZP_18479813.1| hypothetical protein HMPREF1305_02623 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425087343|ref|ZP_18490436.1| hypothetical protein HMPREF1307_02792 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|428153196|ref|ZP_19000833.1| FIG00731387: hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428940271|ref|ZP_19013360.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae VA360]
gi|150955126|gb|ABR77156.1| putative LysM domain [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|364518239|gb|AEW61367.1| hypothetical protein KPHS_26690 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397345921|gb|EJJ39041.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397347394|gb|EJJ40501.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397351705|gb|EJJ44787.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397363499|gb|EJJ56139.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397365024|gb|EJJ57651.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397369806|gb|EJJ62405.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397376661|gb|EJJ68914.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397382543|gb|EJJ74704.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397387712|gb|EJJ79727.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397396155|gb|EJJ87850.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397398494|gb|EJJ90157.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397405270|gb|EJJ96741.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397413579|gb|EJK04791.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397413766|gb|EJK04972.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397422499|gb|EJK13468.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397429315|gb|EJK20034.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397429964|gb|EJK20667.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397440655|gb|EJK31057.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397446257|gb|EJK36480.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397448936|gb|EJK39092.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|405592419|gb|EKB65871.1| hypothetical protein HMPREF1305_02623 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405604067|gb|EKB77188.1| hypothetical protein HMPREF1307_02792 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|410112773|emb|CCM85680.1| FIG00731387: hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410123802|emb|CCM86255.1| FIG00731387: hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|426302602|gb|EKV64799.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae VA360]
gi|427536891|emb|CCM96971.1| FIG00731387: hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 149
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 85 AQKPIKVPIHCICSNGTGV---SDKVPV---------YTVKKDDGLDFIARTIFGQLLKY 132
A + K I N TGV SD V V YTVK D L I++ ++G +Y
Sbjct: 62 ASQEDKEKILVAVGNVTGVGQVSDGVKVTQSGAESRFYTVKSGDTLSAISKAMYGSANEY 121
Query: 133 QKIVEANN--ISNPDLIQIGQNLTIP 156
Q+I EAN +++PD I GQ L IP
Sbjct: 122 QRIFEANKPMLTHPDKIYPGQVLIIP 147
>gi|91070096|gb|ABE11020.1| putative LysM domain [uncultured Prochlorococcus marinus clone
ASNC729]
Length = 256
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 61 VKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF 120
+K+ I N R S+ +K IH + S G +S Y++ KD
Sbjct: 23 IKSEEKIFSTKNKIENIARKESITEEKTEIKKIHIVKS-GDTISSISKFYSINKD----- 76
Query: 121 IARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGS 180
I++ NN+ + + I +GQNL I S + + ++ H+V+ G
Sbjct: 77 -------------LIIKLNNLKDENYIFVGQNLIIS-ESSENLTKQSDLIKNYHIVQTGE 122
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFD 231
+ I+ K+ L+++N I++ + G+ L++ K ++I ++++D
Sbjct: 123 NLTDISNKYNLKVKELIEINNINNPDSIKIGQKLNITKK---NTINSENYD 170
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
+ H+V+ G + + I++ + ++D ++KLN + D++ + G+ L + + N + ++D
Sbjct: 52 IKKIHIVKSGDTISSISKFYSINKDLIIKLNNLKDENYIFVGQNLIISESSENLTKQSDL 111
Query: 230 FDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKP 265
NY V G + D +N + L+ K
Sbjct: 112 IKNYHIVQTG----------ENLTDISNKYNLKVKE 137
>gi|332668119|ref|YP_004450907.1| peptidoglycan-binding lysin domain-containing protein
[Haliscomenobacter hydrossis DSM 1100]
gi|332336933|gb|AEE54034.1| Peptidoglycan-binding lysin domain protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 156
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
Y VKK D L IA+ ++G +KY I EAN + +P+LI GQ L IP
Sbjct: 106 YEVKKGDSLSKIAKALYGDAMKYPLIFEANKPMLKDPNLIYPGQVLRIP 154
>gi|20330767|gb|AAM19130.1|AC103891_10 Putative protein kinase [Oryza sativa Japonica Group]
gi|108707020|gb|ABF94815.1| Protein kinase domain containing protein [Oryza sativa Japonica
Group]
gi|125585511|gb|EAZ26175.1| hypothetical protein OsJ_10042 [Oryza sativa Japonica Group]
Length = 624
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 21 TLSTAQDFKCSAQTAARCQALVGYL--PPNKTTISEIQSLFTVKNLRSILGANNFPPGTP 78
T +TA+ + + +A C V Y P + I LF V R+++ + N T
Sbjct: 24 TDATARARRFACNVSAPCDTFVVYRTQSPGFLDLGNISDLFGVS--RALIASAN-KLTTE 80
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
+P Q P+ VP+ C C+ ++ Y ++ D +A T F L + + E
Sbjct: 81 DGVLLPGQ-PLLVPVKCGCTGARSFANVT--YPIRPRDTFFGLAVTAFENLTDFVLVEEL 137
Query: 139 NNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDT 195
N + ++ Q + +PL C C +++ + +V + G ++++
Sbjct: 138 NPAAEATRLEPWQEVVVPLFCRCPTREELSAGSRLLVTYVWQPGDDVSVVSALMNASAAN 197
Query: 196 LMKLNGIHDDSKLIAGEPLDVPL 218
+ NG+ +S G+P+ +P+
Sbjct: 198 IAASNGVAGNSTFATGQPVLIPV 220
>gi|12018312|ref|NP_072147.1| tropic 1808 [Rattus norvegicus]
gi|6048399|gb|AAF02216.1| tropic1808 [Rattus norvegicus]
Length = 275
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 24/121 (19%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA + ++ NN+S +I GQ LTI + +NA V
Sbjct: 56 YTVKSGDTLSAIAA---ANGVSLANLLSWNNLSLQAIIYPGQKLTI------QNANNATV 106
Query: 170 V---------------HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
+ ++ V+ G + IA K GT+ TL+ LNG+ S + G+ L
Sbjct: 107 TTPNAPTSTPTVMPSTNGSYTVKSGDTLYGIAAKLGTNVQTLLSLNGLQLSSTIYVGQVL 166
Query: 215 D 215
Sbjct: 167 K 167
>gi|356499893|ref|XP_003518770.1| PREDICTED: probable receptor-like protein kinase At1g49730-like
[Glycine max]
Length = 625
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 20/215 (9%)
Query: 4 FQLKLVLLLFTVCAALSTLSTAQD--FKCSAQTAARCQALVGYLPPNKTTISEIQSLFTV 61
F + LL +C+ T A + F C+ A PN T ++ I LF+V
Sbjct: 13 FSAVFLFLLLPLCSNAQTARQANNTGFTCNFTRTCTSYAFYRATAPNFTDLASIGDLFSV 72
Query: 62 KNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCIC----SNGTGVSDKVPVYTVKKDDG 117
L ++ + + N + P+ VP+ C C ++ +S YT+ D
Sbjct: 73 SRL--MISTPSNISSSSLNTPLLPNTPLFVPLTCSCNPVNASFGSLSYANISYTINPGDT 130
Query: 118 LDFIARTIFGQLLKYQKIVEANNISNPDLI----QIGQNLTIPLPCSCDDVDNAKVVHYA 173
++ F L + + + NP L+ IGQ+ P+ C C +
Sbjct: 131 FFLVSTIKFQNLTTFPSV----EVVNPTLLATNLSIGQDTIFPIFCKCPPNSQGTNYMIS 186
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNG----IHD 204
+VV+ + + IA FG + +++ NG +HD
Sbjct: 187 YVVQPEDNMSSIASTFGAEEQSIIDANGGETTLHD 221
>gi|228985604|ref|ZP_04145758.1| Cell wall hydrolase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228774181|gb|EEM22593.1| Cell wall hydrolase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 265
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 12/115 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV---D 165
VYTV+K+D L+ I++ + Q + + NN +N D I IG+ LTIP+ + + +
Sbjct: 31 VYTVQKNDTLEAISKQY---EVSVQSLKQENNKAN-DQINIGERLTIPISSTANKYVQKN 86
Query: 166 NAKV----VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
N+ V + V+ G + + I+Q++ +L + N + D++ + AG+ L +
Sbjct: 87 NSPVSTNTYQAIYQVKSGDTLSSISQQYKVSIQSLKQNNNV-DENHIFAGQHLKI 140
>gi|224373222|ref|YP_002607594.1| regulatory protein dnir [Nautilia profundicola AmH]
gi|223589039|gb|ACM92775.1| regulatory protein dnir [Nautilia profundicola AmH]
Length = 446
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY VKK D L IA ++ + I + N I ++IGQ L IPL N+
Sbjct: 350 VYKVKKGDTLSKIASKYDTKV---RIIKDFNKIGR--FLRIGQKLVIPL--------NSI 396
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V Y V++G S IA++FG D L+K+N + + + + G+ L VP
Sbjct: 397 YVKYK--VKKGDSLRKIAREFGIDYKKLIKVNELKNTT-IRVGQILKVP 442
>gi|429750624|ref|ZP_19283642.1| LysM domain protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429164320|gb|EKY06463.1| LysM domain protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 644
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK + L IA+ + ++I + NPD ++ GQ + IP V N
Sbjct: 144 YVVKPQETLWKIAKNHNVNVEDLERINKKEKNFNPDQLREGQEIWIPASAVDSSVPNTNS 203
Query: 170 VHYA------------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ A +++E+G F + +KFG + L+KLN L +G ++
Sbjct: 204 SYVAPASNNSTGGMVTYIIEKGEGFFSLERKFGLSENELIKLN-----PSLKSGLKSEMQ 258
Query: 218 LKACNSSIKADSFDNYLRVANGTYTFT-ANSCVKCQCDATN 257
+ +I +++D Y+ + GTY F +NS ++ +N
Sbjct: 259 I-----NIPKENYDRYVASSFGTYNFEDSNSALRSSSHPSN 294
>gi|169633081|ref|YP_001706817.1| bifunctional lytic murein transglycosylase C, membrane-bound
(MtlD)/cell wall hydrolase [Acinetobacter baumannii SDF]
gi|169151873|emb|CAP00708.1| putative bifunctional protein [Includes: lytic murein
transglycosylase C, membrane-bound (MtlD); cell wall
hydrolase] [Acinetobacter baumannii]
Length = 1071
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGASV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L G+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRTGQRLKL 881
>gi|254228408|ref|ZP_04921834.1| membrane-bound lytic murein transglycosylase D [Vibrio sp. Ex25]
gi|262393542|ref|YP_003285396.1| membrane-bound lytic murein transglycosylase D [Vibrio sp. Ex25]
gi|151938996|gb|EDN57828.1| membrane-bound lytic murein transglycosylase D [Vibrio sp. Ex25]
gi|262337136|gb|ACY50931.1| membrane-bound lytic murein transglycosylase D precursor [Vibrio
sp. Ex25]
Length = 527
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 85/228 (37%), Gaps = 28/228 (12%)
Query: 61 VKNLRSILGANN---FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDG 117
VK L+S A N P P +P +K + G G+ KV Y VK D
Sbjct: 295 VKELQSYNPAYNQWSTAPEGPHKLLIPVEKKETFLSKVEKNRGKGM--KVARYKVKSGDS 352
Query: 118 LDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH------ 171
L +A +G K I AN +SN + I+IGQ L IP + DD A
Sbjct: 353 LSVLANK-YGTTTKV--IRRANGLSNNN-IRIGQYLLIPT-STKDDAKYALTAQNRLSKT 407
Query: 172 ---------YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
HVV+ G S IA++ +L K NG+ L G+ L + +
Sbjct: 408 QSRARGQLKLTHVVQSGESLWSIARENKVSYKSLAKWNGMGPKDPLRVGQKLVIWKDSDK 467
Query: 223 SSIKADSFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKPSQFQP 270
++ F N V +G S K + + W K QP
Sbjct: 468 GAVIRTVFYN---VRSGDTISGIASKFKVKTNDIVKWNSLHKKKYLQP 512
>gi|389686550|ref|ZP_10177871.1| putative phospholipid-binding domain/LysM domain protein
[Pseudomonas chlororaphis O6]
gi|388550011|gb|EIM13283.1| putative phospholipid-binding domain/LysM domain protein
[Pseudomonas chlororaphis O6]
Length = 146
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
TVKK D L I++ ++G KY KI EAN +S+PD I GQ L IP
Sbjct: 98 TVKKGDTLSAISKAVYGDANKYNKIFEANKPLLSHPDKIYPGQVLRIP 145
>gi|336114301|ref|YP_004569068.1| peptidoglycan-binding LysM [Bacillus coagulans 2-6]
gi|335367731|gb|AEH53682.1| Peptidoglycan-binding LysM [Bacillus coagulans 2-6]
Length = 470
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 18/123 (14%)
Query: 95 CICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLT 154
+ V D+ Y V+K D L IA + + Q ++ AN + NP L+ GQ L
Sbjct: 39 LVPGQALAVPDRFFQYIVQKGDQLGTIAARLG---VPAQALINANQLRNPALLFPGQVLF 95
Query: 155 IPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
IP + H V +G + IA+ +G D +++ N + + L AG+ L
Sbjct: 96 IP--------------YRNHTVTQGETLYSIARTYGADMGAIIQANRL-PGTALSAGQVL 140
Query: 215 DVP 217
VP
Sbjct: 141 RVP 143
>gi|227528950|ref|ZP_03958999.1| glycoside hydrolase family 25 [Lactobacillus vaginalis ATCC 49540]
gi|227351150|gb|EEJ41441.1| glycoside hydrolase family 25 [Lactobacillus vaginalis ATCC 49540]
Length = 370
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 26/140 (18%)
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
P TP VPA +P++ + TG Y V+ D L IA +Q
Sbjct: 204 PSTP----VPAPQPVE----HVGKPATGT------YIVQSGDTLSGIAEKY---NTTWQN 246
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
+ N++ NP+ IQ+GQ L + S + + V+ G + + IA KFGT
Sbjct: 247 LAAINSLGNPNFIQVGQVLKVTGNASPQNT---------YYVQAGDTLSGIAAKFGTTVS 297
Query: 195 TLMKLNGIHDDSKLIAGEPL 214
+L+ LN I + + + G+ +
Sbjct: 298 SLVSLNHIANPNVIYVGQKI 317
>gi|313122607|ref|YP_004044534.1| LysM domain-containing protein [Halogeometricum borinquense DSM
11551]
gi|448285202|ref|ZP_21476449.1| LysM domain-containing protein [Halogeometricum borinquense DSM
11551]
gi|312296089|gb|ADQ69178.1| LysM domain-containing protein [Halogeometricum borinquense DSM
11551]
gi|445577293|gb|ELY31730.1| LysM domain-containing protein [Halogeometricum borinquense DSM
11551]
Length = 222
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 104 SDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
+DK V+TV + D L IA + ++ I E NN+ NP IQ GQ L +P
Sbjct: 168 TDKTKVWTVSEGDTLWLIASEEYSDPAHWRTIAEHNNLENPRDIQAGQKLELP 220
>gi|71065093|ref|YP_263820.1| LysM domain/BON superfamily protein [Psychrobacter arcticus 273-4]
gi|71038078|gb|AAZ18386.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 168
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+YTVK D L IA+ ++G Y KI EAN +S+PD I GQ L IP
Sbjct: 118 MYTVKTGDSLSKIAKDVYGSTGDYMKIFEANKPMLSDPDKIYPGQVLRIP 167
>gi|375105311|ref|ZP_09751572.1| putative phospholipid-binding protein,LysM domain-containing
protein [Burkholderiales bacterium JOSHI_001]
gi|374666042|gb|EHR70827.1| putative phospholipid-binding protein,LysM domain-containing
protein [Burkholderiales bacterium JOSHI_001]
Length = 168
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 104 SDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+D+ YTV+K D L I++ + KYQ I EAN +S+PD I GQ L IP
Sbjct: 111 ADEAQYYTVEKGDNLSKISKAFYDTPNKYQAIFEANKPMLSHPDKIYPGQVLRIP 165
>gi|422717856|ref|ZP_16774529.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0309B]
gi|315573860|gb|EFU86051.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0309B]
Length = 419
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 96 ICSNGTGVSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL 153
+ + T V DK P + V+ + L IA +G YQ + N ++NP+LI GQ L
Sbjct: 310 LLPDATIVPDKQPESTHVVQYGETLSSIAYQ-YGT--DYQTLASLNGLANPNLIYPGQVL 366
Query: 154 TIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
+ N VV + V+ G + + IA K GT TL LNG+ + + + G+
Sbjct: 367 KV----------NGSVVSNVYTVQYGDNLSSIAAKLGTTYQTLAALNGLSNPNLIYPGQT 416
Query: 214 L 214
L
Sbjct: 417 L 417
>gi|423665141|ref|ZP_17640302.1| hypothetical protein IKM_05421 [Bacillus cereus VDM022]
gi|401291108|gb|EJR96791.1| hypothetical protein IKM_05421 [Bacillus cereus VDM022]
Length = 265
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLI 147
P+ I + SN + VYTV+K+D L+ I++ + Q + +ANN +N D I
Sbjct: 11 PLSAAIITVVSNPVRTAAST-VYTVQKNDTLEAISKQY---EVSIQSLKQANNKAN-DQI 65
Query: 148 QIGQNLTIPLPCSCDDV---DNAKV----VHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
IG+ LTIP+ + ++ +N+ V + V+ G + + I+Q++ ++ + N
Sbjct: 66 NIGERLTIPVSSTANEYVQKNNSTVSTNTYQAIYQVKNGDTLSSISQQYKVSIQSIKQNN 125
Query: 201 GIHDDSKLIAGEPLDV 216
+ D++ + G+ L +
Sbjct: 126 NV-DENHIFFGQHLKI 140
>gi|209695827|ref|YP_002263757.1| membrane-bound lytic murein transglycosylase D [Aliivibrio
salmonicida LFI1238]
gi|208009780|emb|CAQ80086.1| membrane-bound lytic murein transglycosylase D precursor
[Aliivibrio salmonicida LFI1238]
Length = 517
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+TVK + L IAR + Y+ + + N ++ D +++GQ L I S D +
Sbjct: 409 HTVKDGESLWSIARD---NSISYRDLAKWNGMAPKDSLRVGQKLVIW--KSNSDGGIIRT 463
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSI 225
VHY + +G + + IAQKF +MK N I S + G+ L + +++
Sbjct: 464 VHYQ--IRQGDNLSSIAQKFSVSVTDIMKWNSIERGSYIKPGQKLKLYFDVTKANV 517
>gi|365138302|ref|ZP_09344991.1| hypothetical protein HMPREF1024_01022 [Klebsiella sp. 4_1_44FAA]
gi|424933410|ref|ZP_18351782.1| Putative LysM domain protein [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425091550|ref|ZP_18494635.1| hypothetical protein HMPREF1308_01810 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|363655280|gb|EHL94138.1| hypothetical protein HMPREF1024_01022 [Klebsiella sp. 4_1_44FAA]
gi|405612609|gb|EKB85360.1| hypothetical protein HMPREF1308_01810 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407807597|gb|EKF78848.1| Putative LysM domain protein [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
Length = 149
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 85 AQKPIKVPIHCICSNGTGV---SDKVPV---------YTVKKDDGLDFIARTIFGQLLKY 132
A + K I N TGV SD V V YTVK D L I++ ++G +Y
Sbjct: 62 ASQEDKEKILVAVGNVTGVGQVSDGVKVTQSGAESRFYTVKSGDTLSAISKAMYGSANEY 121
Query: 133 QKIVEANN--ISNPDLIQIGQNLTIP 156
Q+I EAN +++PD I GQ L IP
Sbjct: 122 QRIFEANKPMLTHPDKIYPGQVLIIP 147
>gi|422714718|ref|ZP_16771444.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0309A]
gi|315580344|gb|EFU92535.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0309A]
Length = 419
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 96 ICSNGTGVSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNL 153
+ + T V DK P + V+ + L IA +G YQ + N ++NP+LI GQ L
Sbjct: 310 LLPDATIVPDKQPESTHVVQYGETLSSIAYQ-YGT--DYQTLASLNGLANPNLIYPGQVL 366
Query: 154 TIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEP 213
+ N VV + V+ G + + IA K GT TL LNG+ + + + G+
Sbjct: 367 KV----------NGSVVSNVYTVQYGDNLSSIAAKLGTTYQTLAALNGLSNPNLIYPGQT 416
Query: 214 L 214
L
Sbjct: 417 L 417
>gi|269960613|ref|ZP_06174985.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834690|gb|EEZ88777.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 528
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
P P +P +K + + G G+ KV Y VK D L +A+ +G K
Sbjct: 313 PNGPHQLLIPIEKKDQFLAQVKKNRGKGM--KVARYKVKSGDSLSVLAQK-YGTTTKV-- 367
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVH---------------YAHVVEEG 179
I AN + N + I++GQ L IP + DD A HVV+ G
Sbjct: 368 IQRANGLKNNN-IRVGQYLMIPT-STKDDAKYALTAENRLNKTQSQARGQFKLTHVVQSG 425
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
S IA++ +L K NG+ L G+ L
Sbjct: 426 ESLWSIAKENKVSHKSLAKWNGMGPKDTLRVGQKL 460
>gi|89893931|ref|YP_517418.1| hypothetical protein DSY1185 [Desulfitobacterium hafniense Y51]
gi|423075503|ref|ZP_17064220.1| LysM domain protein [Desulfitobacterium hafniense DP7]
gi|89333379|dbj|BAE82974.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361853484|gb|EHL05633.1| LysM domain protein [Desulfitobacterium hafniense DP7]
Length = 557
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
VYTVK D L IA+ I+G Y KI EAN + +P+LI GQ L IP
Sbjct: 507 VYTVKAGDTLGSIAKQIYGDSSLYTKIYEANQERLKSPNLIFEGQKLVIP 556
>gi|399010313|ref|ZP_10712688.1| putative phospholipid-binding protein [Pseudomonas sp. GM17]
gi|398107359|gb|EJL97360.1| putative phospholipid-binding protein [Pseudomonas sp. GM17]
Length = 146
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
TVKK D L I++ ++G KY KI EAN +S+PD I GQ L IP
Sbjct: 98 TVKKGDTLSAISKAVYGDANKYNKIFEANKPLLSHPDKIYPGQVLRIP 145
>gi|300113505|ref|YP_003760080.1| peptidoglycan-binding lysin domain-containing protein
[Nitrosococcus watsonii C-113]
gi|299539442|gb|ADJ27759.1| Peptidoglycan-binding lysin domain protein [Nitrosococcus watsonii
C-113]
Length = 312
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLTIPLP 158
TV+ D L IA ++G K++ I EAN + NPD + +G LTIP P
Sbjct: 261 TVRSGDSLSVIADRVYGDAGKWRLIYEANQDQLENPDQLLVGMKLTIPAP 310
>gi|255563130|ref|XP_002522569.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
precursor, putative [Ricinus communis]
gi|223538260|gb|EEF39869.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
precursor, putative [Ricinus communis]
Length = 624
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDF-IARTIFGQLLKYQKIVEANN 140
++P K + VP++C C G Y +K ++ F +A + L Q + E N
Sbjct: 100 TIPTNKQVVVPVNCSCHAGLYYQHNA-TYRIKDENENYFTLANDTYQGLTTCQSLWEQNP 158
Query: 141 ISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLM 197
+L G +L +PL C+C + + ++V G +LIA+ F + +++
Sbjct: 159 YDLNELYA-GSDLHVPLRCACPTPNQTASGVKCMLTYMVTWGDYISLIAELFNANEQSVL 217
Query: 198 KLNGIHDDSKLIAGEPLDVPLKACNSSI 225
N + +D + P+ VPL + S++
Sbjct: 218 DANELLEDDLIYPFTPILVPLLSEPSTV 245
>gi|167036871|ref|YP_001664449.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039577|ref|YP_001662562.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
sp. X514]
gi|300915173|ref|ZP_07132488.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X561]
gi|307725097|ref|YP_003904848.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X513]
gi|320115293|ref|YP_004185452.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853817|gb|ABY92226.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X514]
gi|166855705|gb|ABY94113.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300888897|gb|EFK84044.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X561]
gi|307582158|gb|ADN55557.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
X513]
gi|319928384|gb|ADV79069.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 327
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA+ + Y+ I+ NN++ P I GQ L IP
Sbjct: 57 YTVQPGDTLYLIAQKFN---VPYEAIIYTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPS 113
Query: 170 VHYA-------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
A + V+ G + IAQKFG + L+K N + + + + G+ L +P
Sbjct: 114 PPPAQKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLINPNMIYPGQTLIIP 168
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I+ NNI NP LI GQ L IP+ S + V+ G + LIAQKF +
Sbjct: 30 IITRNNIINPSLIYPGQRLVIPVQGSY------------YTVQPGDTLYLIAQKFNVPYE 77
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
++ N + + G+ L +P
Sbjct: 78 AIIYTNNLTYPYTIYPGQKLFIP 100
>gi|219668305|ref|YP_002458740.1| peptidoglycan-binding LysM [Desulfitobacterium hafniense DCB-2]
gi|219538565|gb|ACL20304.1| Peptidoglycan-binding LysM [Desulfitobacterium hafniense DCB-2]
Length = 546
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
VYTVK D L IA+ I+G Y KI EAN + +P+LI GQ L IP
Sbjct: 496 VYTVKAGDTLGSIAKQIYGDSSLYTKIYEANQERLKSPNLIFEGQKLVIP 545
>gi|425896965|ref|ZP_18873556.1| putative phospholipid-binding domain/LysM domain protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397884427|gb|EJL00913.1| putative phospholipid-binding domain/LysM domain protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 146
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
TVKK D L I++ ++G KY KI EAN +S+PD I GQ L IP
Sbjct: 98 TVKKGDTLSAISKAVYGDANKYNKIFEANKPLLSHPDKIYPGQVLRIP 145
>gi|372223405|ref|ZP_09501826.1| peptidoglycan-binding lysin domain-containing protein
[Mesoflavibacter zeaxanthinifaciens S86]
Length = 126
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+TVK + L IA+ +G +KY++I EAN + NPD+I Q L IP
Sbjct: 76 HTVKSGESLSLIAKHYYGDPMKYKQIFEANTGILKNPDVIHPDQELVIP 124
>gi|425854866|gb|AFX96944.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854868|gb|AFX96945.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854870|gb|AFX96946.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854872|gb|AFX96947.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854874|gb|AFX96948.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854876|gb|AFX96949.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854878|gb|AFX96950.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854880|gb|AFX96951.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854882|gb|AFX96952.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854884|gb|AFX96953.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854886|gb|AFX96954.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854888|gb|AFX96955.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854890|gb|AFX96956.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854892|gb|AFX96957.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854894|gb|AFX96958.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854896|gb|AFX96959.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854898|gb|AFX96960.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854900|gb|AFX96961.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854902|gb|AFX96962.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854904|gb|AFX96963.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854906|gb|AFX96964.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854908|gb|AFX96965.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854910|gb|AFX96966.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854912|gb|AFX96967.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854914|gb|AFX96968.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854916|gb|AFX96969.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854918|gb|AFX96970.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854920|gb|AFX96971.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854922|gb|AFX96972.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854924|gb|AFX96973.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854926|gb|AFX96974.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854928|gb|AFX96975.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854930|gb|AFX96976.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854932|gb|AFX96977.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854934|gb|AFX96978.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854936|gb|AFX96979.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854938|gb|AFX96980.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854940|gb|AFX96981.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854942|gb|AFX96982.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854946|gb|AFX96984.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854948|gb|AFX96985.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854950|gb|AFX96986.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854952|gb|AFX96987.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854954|gb|AFX96988.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854956|gb|AFX96989.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854958|gb|AFX96990.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854960|gb|AFX96991.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854962|gb|AFX96992.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854964|gb|AFX96993.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854966|gb|AFX96994.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854968|gb|AFX96995.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854970|gb|AFX96996.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854974|gb|AFX96998.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854976|gb|AFX96999.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854978|gb|AFX97000.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854980|gb|AFX97001.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854982|gb|AFX97002.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854984|gb|AFX97003.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854986|gb|AFX97004.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854988|gb|AFX97005.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854990|gb|AFX97006.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854992|gb|AFX97007.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854994|gb|AFX97008.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854996|gb|AFX97009.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425854998|gb|AFX97010.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855000|gb|AFX97011.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855002|gb|AFX97012.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855004|gb|AFX97013.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855006|gb|AFX97014.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855008|gb|AFX97015.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855010|gb|AFX97016.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855012|gb|AFX97017.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855014|gb|AFX97018.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855016|gb|AFX97019.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855018|gb|AFX97020.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855020|gb|AFX97021.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855022|gb|AFX97022.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855024|gb|AFX97023.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855026|gb|AFX97024.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855028|gb|AFX97025.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855030|gb|AFX97026.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855032|gb|AFX97027.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855034|gb|AFX97028.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855036|gb|AFX97029.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855038|gb|AFX97030.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855042|gb|AFX97032.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855046|gb|AFX97034.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855048|gb|AFX97035.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855050|gb|AFX97036.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855052|gb|AFX97037.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855054|gb|AFX97038.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855056|gb|AFX97039.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855058|gb|AFX97040.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855060|gb|AFX97041.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855062|gb|AFX97042.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855064|gb|AFX97043.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855066|gb|AFX97044.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855068|gb|AFX97045.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855070|gb|AFX97046.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855072|gb|AFX97047.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855074|gb|AFX97048.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855076|gb|AFX97049.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855078|gb|AFX97050.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855080|gb|AFX97051.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855082|gb|AFX97052.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855084|gb|AFX97053.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855086|gb|AFX97054.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855088|gb|AFX97055.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855090|gb|AFX97056.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855092|gb|AFX97057.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855094|gb|AFX97058.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855096|gb|AFX97059.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855098|gb|AFX97060.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855100|gb|AFX97061.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855102|gb|AFX97062.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855104|gb|AFX97063.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855106|gb|AFX97064.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855108|gb|AFX97065.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855110|gb|AFX97066.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855112|gb|AFX97067.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855114|gb|AFX97068.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855116|gb|AFX97069.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855120|gb|AFX97071.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855122|gb|AFX97072.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855124|gb|AFX97073.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855126|gb|AFX97074.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855128|gb|AFX97075.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855130|gb|AFX97076.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855132|gb|AFX97077.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855134|gb|AFX97078.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855136|gb|AFX97079.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855138|gb|AFX97080.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855140|gb|AFX97081.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855144|gb|AFX97083.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855146|gb|AFX97084.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855148|gb|AFX97085.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855150|gb|AFX97086.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855152|gb|AFX97087.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855154|gb|AFX97088.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855156|gb|AFX97089.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855162|gb|AFX97092.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855164|gb|AFX97093.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855166|gb|AFX97094.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855170|gb|AFX97096.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855172|gb|AFX97097.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855174|gb|AFX97098.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855176|gb|AFX97099.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855178|gb|AFX97100.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855180|gb|AFX97101.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855182|gb|AFX97102.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855184|gb|AFX97103.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855188|gb|AFX97105.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855190|gb|AFX97106.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855192|gb|AFX97107.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855194|gb|AFX97108.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855196|gb|AFX97109.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855198|gb|AFX97110.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855200|gb|AFX97111.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855202|gb|AFX97112.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855204|gb|AFX97113.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855206|gb|AFX97114.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855208|gb|AFX97115.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855210|gb|AFX97116.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855212|gb|AFX97117.1| LysM-receptor-like kinase, partial [Medicago truncatula]
gi|425855214|gb|AFX97118.1| LysM-receptor-like kinase, partial [Medicago truncatula]
Length = 227
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 47 PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDK 106
PN ++S I +F + LR I A+N + +P Q + VP+ C C+ ++
Sbjct: 4 PNFLSLSNISDIFNLSPLR-IAKASNIEAEDKK--LIPDQL-LLVPVTCGCTKNHSFANI 59
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
Y++K+ D ++ T + L Y + N +P L+ + +++PL C C +
Sbjct: 60 T--YSIKQGDNFFILSITSYQNLTNYLEFKNFNPNLSPTLLPLDTKVSVPLFCKCPSKNQ 117
Query: 167 A-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLN 200
K + Y +V ++ + L++ KFG + ++ N
Sbjct: 118 LNKGIKYLITYVWQDNDNVTLVSSKFGASQVEMLAEN 154
>gi|383937025|ref|ZP_09990440.1| membrane-bound lytic murein transglycosylase D [Rheinheimera
nanhaiensis E407-8]
gi|383701935|dbj|GAB60531.1| membrane-bound lytic murein transglycosylase D [Rheinheimera
nanhaiensis E407-8]
Length = 522
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Query: 50 TTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV 109
T+IS IQ + +K LG + P + + S + VP + + K+
Sbjct: 356 TSISAIQRINKLKGNTIRLGQHLLIPMSAEDGS---NYDLSVPNRIAKAQQQALGTKL-T 411
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV++ D L ++R + +I + N I+ ++ GQ L I P + D+ +
Sbjct: 412 YTVQQGDTLWDLSRQ---HKVTVAQIAKWNGIAQRTPLRTGQQLVIWQPQAADNAVSGVS 468
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
++ V +G S A IAQ+F ++K N I+ L G+ L + L
Sbjct: 469 RTVSYKVRKGDSLARIAQRFSITVADIVKWNNINTSQYLQPGQQLKLVL 517
>gi|125543016|gb|EAY89155.1| hypothetical protein OsI_10648 [Oryza sativa Indica Group]
Length = 624
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 21 TLSTAQDFKCSAQTAARCQALVGYL--PPNKTTISEIQSLFTVKNLRSILGANNFPPGTP 78
T +TA+ + + +A C V Y P + I LF V R+++ + N T
Sbjct: 24 TDATARARRFACNVSAPCDTFVVYRTQSPGFLDLGNISDLFGVS--RALIASAN-KLTTE 80
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
+P Q P+ VP+ C C+ ++ Y ++ D +A T F L + + E
Sbjct: 81 DGVLLPGQ-PLLVPVKCGCTGARSFANVT--YPIRPRDTFFGLAVTAFENLTDFVLVEEL 137
Query: 139 NNISNPDLIQIGQNLTIPLPCSC---DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDT 195
N + ++ Q + +PL C C +++ + +V + G ++++
Sbjct: 138 NPAAEATRLEPWQEVVVPLFCRCPTREELSAGSRLLVTYVWQPGDDVSVVSALMNASAAN 197
Query: 196 LMKLNGIHDDSKLIAGEPLDVPL 218
+ NG+ +S G+P+ +P+
Sbjct: 198 IAASNGVAGNSTFATGQPVLIPV 220
>gi|85858931|ref|YP_461133.1| N-acetylmuramoyl-L-alanine amidase [Syntrophus aciditrophicus SB]
gi|85722022|gb|ABC76965.1| N-acetylmuramoyl-L-alanine amidase [Syntrophus aciditrophicus SB]
Length = 725
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 17/122 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VKK D LD IAR L ++E N++ D + G + +P S ++ K
Sbjct: 601 YEVKKGDSLDSIAREHNTTL---SALMELNSMKRTDKLLAGTKIRLPESASSKELKETKT 657
Query: 170 VH--------------YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
+ + V+ G + IA+K+ T D L+ LN + L A +PL
Sbjct: 658 LSSVARPVAGKKKGELITYKVKRGDTLDTIARKYKTRIDVLLSLNNMKLTDPLYANQPLK 717
Query: 216 VP 217
+P
Sbjct: 718 LP 719
>gi|163793138|ref|ZP_02187114.1| Membrane protein [alpha proteobacterium BAL199]
gi|159181784|gb|EDP66296.1| Membrane protein [alpha proteobacterium BAL199]
Length = 396
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
V +V+ D + +AR +G + + I+E N ++ P L+ +G L +P+P
Sbjct: 55 VVSVRPGDTIYALARR-YG--ISPRTIIETNRLAPPYLLHVGDRLMLPVP---------- 101
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
HVV+ G + + IA+ + L+ LNG+ + G+ L++P
Sbjct: 102 ---RVHVVKAGDTVSEIARDRRISMEQLVALNGLRPPYAIRVGQRLNLP 147
>gi|336391321|ref|ZP_08572720.1| hypothetical protein LcortK3_00747 [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 929
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA + + NNISN +LI +GQ LT+ +
Sbjct: 826 YTVKSGDTLSSIASK---NGITTASLASKNNISNANLIYVGQVLTLSGSTATSATVTQLS 882
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
++ V+ G S IA GT L NGI + S + G+ +
Sbjct: 883 NSSSYTVKSGDSLYSIAAAHGTTVQALASKNGISNTSLIYVGQKI 927
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP-LPCSCDDVDNAK 168
YTV+ D L IART F I NNISN +LI +GQ L + +
Sbjct: 702 YTVQSGDTLSAIART-FNTTTA--SIASKNNISNANLIYVGQKLLVSGSAATTSSTATPT 758
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V+ G + + IA K+ T L N I + + + G+ L V
Sbjct: 759 SSSTYYTVKSGDTLSAIASKYNTTAANLASKNSISNANLIYVGQKLVV 806
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 21/117 (17%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQ----KIVEANNISNPDLIQIGQNLTIP------LPC 159
YTV+ D L IA KY + NN+SNP+LI +GQ L +
Sbjct: 576 YTVQSGDTLSAIAN-------KYATTAANLASKNNLSNPNLIYVGQVLNVATTTSSSNTG 628
Query: 160 SCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
S V N K + V+ G + + IA+ + T TL N + + + + G+ L V
Sbjct: 629 STTTVGNTKY----YTVQSGDTLSAIARTYNTTAATLASKNNLANANLIYVGQKLIV 681
>gi|256752566|ref|ZP_05493421.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus CCSD1]
gi|256748563|gb|EEU61612.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus CCSD1]
Length = 327
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA+ + Y+ I+ NN++ P I GQ L IP
Sbjct: 57 YTVQPGDTLYLIAQKFN---VPYEAIIYTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPS 113
Query: 170 VHYA-------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
A + V+ G + IAQKFG + L+K N + + + + G+ L +P
Sbjct: 114 PPPAQKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLINPNMIYPGQTLIIP 168
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I+ NNI NP LI GQ L IP+ S + V+ G + LIAQKF +
Sbjct: 30 IITRNNIINPSLIYPGQRLVIPVQGSY------------YTVQPGDTLYLIAQKFNVPYE 77
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
++ N + + G+ L +P
Sbjct: 78 AIIYTNNLTYPYTIYPGQKLFIP 100
>gi|422870080|ref|ZP_16916578.1| LysM domain protein [Enterococcus faecalis TX1467]
gi|329568750|gb|EGG50550.1| LysM domain protein [Enterococcus faecalis TX1467]
Length = 269
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 167 VPDKQPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 218
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L
Sbjct: 219 -----NGSVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQTL 267
>gi|378724791|gb|AFC35171.1| LysM-domain containing receptor-like kinase, partial [Melilotus
albus]
Length = 274
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 28 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 84
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 85 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTNYLEWENFNPG 141
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 142 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 201
Query: 199 LN 200
N
Sbjct: 202 EN 203
>gi|294780274|ref|ZP_06745643.1| glycosyl hydrolase family 25 [Enterococcus faecalis PC1.1]
gi|294452538|gb|EFG20971.1| glycosyl hydrolase family 25 [Enterococcus faecalis PC1.1]
Length = 419
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK P + V+ + L IA + YQ + N ++NP+LI GQ L +
Sbjct: 317 VPDKQPEATHVVQYGETLSSIA---YQHGTDYQTLAALNGLANPNLIYPGQVLKV----- 368
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L
Sbjct: 369 -----NGSVVSNVYTVQYGDNLSSIAAKLGTTYQTLASLNGLANPNLIYPGQTL 417
>gi|163257374|emb|CAO02950.1| LysM-domain containing receptor-like kinase [Medicago truncatula
var. truncatula]
Length = 243
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 47 PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDK 106
PN ++S I +F + LR I A+N + +P Q + VP+ C C+ ++
Sbjct: 6 PNFLSLSNISDIFNLSPLR-IAKASNIEAEDKK--LIPDQL-LLVPVTCGCTKNHSFANI 61
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
Y++K+ D ++ T + L Y + N +P L+ + +++PL C C +
Sbjct: 62 T--YSIKQGDNFFILSITSYQNLTNYLEFKNFNPNLSPTLLPLDTKVSVPLFCKCPSKNQ 119
Query: 167 A-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMKLN 200
K + Y +V ++ + L++ KFG + ++ N
Sbjct: 120 LNKGIKYLITYVWQDNDNVTLVSSKFGASQVEMLAEN 156
>gi|168070335|ref|XP_001786775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660511|gb|EDQ48411.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 438
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
V VY V + D L IA+ +G L +++VE N I+NP+ + +G L I S D+V
Sbjct: 185 VMVYAVNQGDTLSGIAQR-YG--LTLRRLVEMNKINNPNFVSVGMRLII----SKDEV-- 235
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLN 200
H V+ G + IA ++ R+ L+ N
Sbjct: 236 ------KHTVKRGETLNYIASRYRVSRELLIDRN 263
>gi|152990522|ref|YP_001356244.1| membrane-bound lytic murein transglycosylase D [Nitratiruptor sp.
SB155-2]
gi|151422383|dbj|BAF69887.1| membrane-bound lytic murein transglycosylase D [Nitratiruptor sp.
SB155-2]
Length = 403
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+ VKK + L IAR +G +K + NN+ N +I+IGQ L +P+P +
Sbjct: 307 HRVKKGESLYKIARK-YG--VKVSMLKRFNNL-NRSMIRIGQKLIVPIPKKI-------I 355
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
+ V++G + IA+KFG + + N DS+L GE L
Sbjct: 356 KKRVYRVKKGDTLTFIAKKFGVTAHKIKQWNK-KRDSRLRIGEAL 399
>gi|422732857|ref|ZP_16789185.1| LysM domain protein, partial [Enterococcus faecalis TX0645]
gi|315161142|gb|EFU05159.1| LysM domain protein [Enterococcus faecalis TX0645]
Length = 130
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 28 VPDKQPEATHVVQYGETLSSIAYQ-YGT--DYQTLAALNGLANPNLIYPGQVLKV----- 79
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
N VV + V+ G + + IA K GT L LNG+ + + + G+ L+
Sbjct: 80 -----NGSVVSNVYTVQYGDNLSNIAAKLGTTYQALAALNGLANPNLIYPGQTLN 129
>gi|310658820|ref|YP_003936541.1| conserved protein of unknown function [[Clostridium] sticklandii]
gi|308825598|emb|CBH21636.1| conserved protein of unknown function [[Clostridium] sticklandii]
Length = 217
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 138 ANNISNPDLIQIGQ-NLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTL 196
AN +S P ++Q N + L S + + + + + +++G + IA+++GT D +
Sbjct: 132 ANAVSIPTVVQNNTVNDAVKLLESTKENADTPITNIDYKIKQGDTLTRIAKQYGTTIDEI 191
Query: 197 MKLN-GIHDDSKLIAGEPLDVPLKA 220
+KLN GI + + +IAG+ L++P+KA
Sbjct: 192 LKLNKGIKNPNLIIAGKNLNIPVKA 216
>gi|421194710|ref|ZP_15651927.1| phage lysin [Oenococcus oeni AWRIB568]
gi|421196692|ref|ZP_15653874.1| phage lysin [Oenococcus oeni AWRIB576]
gi|399976517|gb|EJO10537.1| phage lysin [Oenococcus oeni AWRIB576]
gi|399977258|gb|EJO11244.1| phage lysin [Oenococcus oeni AWRIB568]
Length = 432
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA +G YQK+ N I +P +I G+ L + S KV
Sbjct: 335 YTVQSGDTLGAIAAK-YGT--TYQKLASLNGIGSPYIIVPGEKLKVSGSVSSSSASYYKV 391
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
G + + IA K+GT L+ LNG+ + + + GE L +
Sbjct: 392 A-------SGDTLSAIASKYGTSVSKLVSLNGLKNANYIYVGENLKI 431
>gi|187929346|ref|YP_001899833.1| LysM domain/BON superfamily protein [Ralstonia pickettii 12J]
gi|309781800|ref|ZP_07676533.1| LysM/phospholipid-binding domain protein [Ralstonia sp. 5_7_47FAA]
gi|404396540|ref|ZP_10988334.1| hypothetical protein HMPREF0989_03231 [Ralstonia sp. 5_2_56FAA]
gi|187726236|gb|ACD27401.1| Peptidoglycan-binding LysM [Ralstonia pickettii 12J]
gi|308919441|gb|EFP65105.1| LysM/phospholipid-binding domain protein [Ralstonia sp. 5_7_47FAA]
gi|348613630|gb|EGY63209.1| hypothetical protein HMPREF0989_03231 [Ralstonia sp. 5_2_56FAA]
Length = 161
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 81 FSVPAQKPIKVPIHCICSNGTG---VSDKVPV---------YTVKKDDGLDFIARTIFGQ 128
F V + + I C N G V D++ V +TV++ D L IA+ +G
Sbjct: 70 FGVAPDQATREKIILCCGNVEGIKSVDDQMSVNTESEESQWHTVERGDTLSAIAKKFYGD 129
Query: 129 LLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
KY I EAN +SNPD I GQ L IP
Sbjct: 130 ANKYPAIFEANKPMLSNPDKIYPGQKLRIP 159
>gi|145596958|ref|YP_001161255.1| peptidoglycan-binding LysM [Salinispora tropica CNB-440]
gi|145306295|gb|ABP56877.1| Peptidoglycan-binding LysM [Salinispora tropica CNB-440]
Length = 407
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
TG S++ PVY V + D L IA YQ + N +++PD I GQ L +P
Sbjct: 181 TGESEREPVYRVARGDYLGSIAARYLDGFEDYQSLATLNRLTDPDRIHPGQLLRLP 236
>gi|169631879|ref|YP_001705528.1| hypothetical protein MAB_4806c [Mycobacterium abscessus ATCC 19977]
gi|420866376|ref|ZP_15329765.1| hypothetical protein MA4S0303_4746 [Mycobacterium abscessus
4S-0303]
gi|420871167|ref|ZP_15334549.1| hypothetical protein MA4S0726RA_4681 [Mycobacterium abscessus
4S-0726-RA]
gi|420875618|ref|ZP_15338994.1| hypothetical protein MA4S0726RB_4277 [Mycobacterium abscessus
4S-0726-RB]
gi|420924098|ref|ZP_15387394.1| hypothetical protein MA6G0728S_4730 [Mycobacterium abscessus
6G-0728-S]
gi|420929759|ref|ZP_15393038.1| hypothetical protein MA6G1108_4970 [Mycobacterium abscessus
6G-1108]
gi|420985482|ref|ZP_15448649.1| hypothetical protein MA6G0728R_4972 [Mycobacterium abscessus
6G-0728-R]
gi|420987951|ref|ZP_15451107.1| hypothetical protein MA4S0206_4749 [Mycobacterium abscessus
4S-0206]
gi|421009458|ref|ZP_15472567.1| hypothetical protein MA3A0119R_5133 [Mycobacterium abscessus
3A-0119-R]
gi|421030734|ref|ZP_15493764.1| hypothetical protein MA3A0930R_5150 [Mycobacterium abscessus
3A-0930-R]
gi|421035993|ref|ZP_15499010.1| hypothetical protein MA3A0930S_5084 [Mycobacterium abscessus
3A-0930-S]
gi|421041833|ref|ZP_15504841.1| hypothetical protein MA4S0116R_4700 [Mycobacterium abscessus
4S-0116-R]
gi|421045967|ref|ZP_15508967.1| hypothetical protein MA4S0116S_3820 [Mycobacterium abscessus
4S-0116-S]
gi|169243846|emb|CAM64874.1| Conserved hypothetical protein [Mycobacterium abscessus]
gi|392065092|gb|EIT90941.1| hypothetical protein MA4S0303_4746 [Mycobacterium abscessus
4S-0303]
gi|392067093|gb|EIT92941.1| hypothetical protein MA4S0726RB_4277 [Mycobacterium abscessus
4S-0726-RB]
gi|392070637|gb|EIT96484.1| hypothetical protein MA4S0726RA_4681 [Mycobacterium abscessus
4S-0726-RA]
gi|392126747|gb|EIU52498.1| hypothetical protein MA6G1108_4970 [Mycobacterium abscessus
6G-1108]
gi|392128751|gb|EIU54501.1| hypothetical protein MA6G0728S_4730 [Mycobacterium abscessus
6G-0728-S]
gi|392170478|gb|EIU96156.1| hypothetical protein MA6G0728R_4972 [Mycobacterium abscessus
6G-0728-R]
gi|392182230|gb|EIV07881.1| hypothetical protein MA4S0206_4749 [Mycobacterium abscessus
4S-0206]
gi|392195064|gb|EIV20683.1| hypothetical protein MA3A0119R_5133 [Mycobacterium abscessus
3A-0119-R]
gi|392218616|gb|EIV44141.1| hypothetical protein MA3A0930R_5150 [Mycobacterium abscessus
3A-0930-R]
gi|392219845|gb|EIV45369.1| hypothetical protein MA3A0930S_5084 [Mycobacterium abscessus
3A-0930-S]
gi|392222761|gb|EIV48284.1| hypothetical protein MA4S0116R_4700 [Mycobacterium abscessus
4S-0116-R]
gi|392235420|gb|EIV60918.1| hypothetical protein MA4S0116S_3820 [Mycobacterium abscessus
4S-0116-S]
Length = 449
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L +A +G Y+ I N IS+P I +G+ L IP DV V
Sbjct: 56 YTVVAGDTLSALALRFYGDAELYRLIAAVNGISDPGAIGVGRRLVIP------DVTRYTV 109
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRD---TLMKLNGIHDDSKLIAGEPL 214
V G + + +A +F D + + +NGI D + L AG L
Sbjct: 110 V-------AGDTLSALALRFYGDAELYRLIAAVNGIADPTALDAGRVL 150
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 16/114 (14%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
V +TV D L +A +G Y+ I A+ IS+P I +G+ L IP DV
Sbjct: 2 VRTHTVVAGDTLWQLALRFYGDAELYRLIATASGISDPGAIGVGRRLVIP------DVTR 55
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRD---TLMKLNGIHDDSKLIAGEPLDVP 217
VV G + + +A +F D + + +NGI D + G L +P
Sbjct: 56 YTVV-------AGDTLSALALRFYGDAELYRLIAAVNGISDPGAIGVGRRLVIP 102
>gi|257087196|ref|ZP_05581557.1| lysin [Enterococcus faecalis D6]
gi|422724034|ref|ZP_16780524.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX2137]
gi|256995226|gb|EEU82528.1| lysin [Enterococcus faecalis D6]
gi|315025997|gb|EFT37929.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX2137]
Length = 419
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 317 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 368
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L
Sbjct: 369 -----NGSVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQTL 417
>gi|410465088|ref|ZP_11318457.1| LysM domain-containing protein [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981790|gb|EKO38310.1| LysM domain-containing protein [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 301
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 158 PCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
P VD K + Y VE+G + A+IA+KFG D L+ N + D KL AG+ L +P
Sbjct: 33 PAPTVAVDTPKPLTYK--VEKGDTVAVIAKKFGVDGKALLAANNLADAKKLKAGQTLTIP 90
>gi|420918927|ref|ZP_15382230.1| hypothetical protein MA6G0125S_5039 [Mycobacterium abscessus
6G-0125-S]
gi|420969450|ref|ZP_15432653.1| hypothetical protein MM3A0810R_5214 [Mycobacterium abscessus
3A-0810-R]
gi|392111818|gb|EIU37588.1| hypothetical protein MA6G0125S_5039 [Mycobacterium abscessus
6G-0125-S]
gi|392245106|gb|EIV70584.1| hypothetical protein MM3A0810R_5214 [Mycobacterium abscessus
3A-0810-R]
Length = 500
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L +A +G Y+ I N IS+P I +G+ L IP DV V
Sbjct: 56 YTVVAGDTLSALALRFYGDAELYRLIAAVNGISDPGAIGVGRRLVIP------DVTRYTV 109
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRD---TLMKLNGIHDDSKLIAGEPLDVP 217
V G + + +A +F D + + +NGI D + G L +P
Sbjct: 110 V-------AGDTLSALALRFYGDAELYRLIAAVNGISDPGAIGVGRRLVIP 153
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 16/114 (14%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN 166
V +TV D L +A +G Y+ I A+ IS+P I +G+ L IP DV
Sbjct: 2 VRTHTVVAGDTLWQLALRFYGDAELYRLIATASGISDPGAIGVGRRLVIP------DVTR 55
Query: 167 AKVVHYAHVVEEGSSFALIAQKFGTDRD---TLMKLNGIHDDSKLIAGEPLDVP 217
VV G + + +A +F D + + +NGI D + G L +P
Sbjct: 56 YTVV-------AGDTLSALALRFYGDAELYRLIAAVNGISDPGAIGVGRRLVIP 102
>gi|257422221|ref|ZP_05599211.1| endolysin [Enterococcus faecalis X98]
gi|422719482|ref|ZP_16776123.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0017]
gi|257164045|gb|EEU94005.1| endolysin [Enterococcus faecalis X98]
gi|315033308|gb|EFT45240.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0017]
Length = 419
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 317 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 368
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L
Sbjct: 369 -----NGSVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQTL 417
>gi|145687953|gb|ABP88927.1| lysin [Lactobacillus phage phiPYB5]
Length = 418
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 85 AQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNP 144
AQKP K I + G + YTV+ D L IA + +G + +V N I N
Sbjct: 235 AQKP-KTTTPAITT-GKQLHQDTHNYTVRYGDTLSAIA-SRYGMTVN--ALVTLNGIQNA 289
Query: 145 DLIQIGQNLTIPLPCSCDDVDNAKVV------HYAHVVEEGSSFALIAQKFGTDRDTLMK 198
+LI GQ L + + V N A+ V G + + IA ++GT TL
Sbjct: 290 NLIYPGQVLRVADSGAGSTVTNKATTPITSTGTQAYTVRYGDTLSGIASRYGTSTSTLAS 349
Query: 199 LNGIHDDSKLIAGEPLDVPLKACNSSIKADSFD 231
LNGI + + + G+ L + + S S D
Sbjct: 350 LNGISNPNWIYPGQVLKLSGGSSARSYTVRSGD 382
>gi|85818927|gb|EAQ40086.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 126
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+TV D L IA+ +G +KY++I EAN + NPD+I QNL IP
Sbjct: 75 HTVASGDTLGKIAKHYYGDAMKYKEIFEANKDILKNPDVIHPDQNLVIP 123
>gi|378724771|gb|AFC35161.1| LysM-domain containing receptor-like kinase, partial [Melilotus
albus]
Length = 274
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 28 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 84
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 85 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTNYLEWENFNPG 141
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 142 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 201
Query: 199 LN 200
N
Sbjct: 202 EN 203
>gi|307268122|ref|ZP_07549509.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX4248]
gi|306515512|gb|EFM84040.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX4248]
Length = 419
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 317 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 368
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L
Sbjct: 369 -----NGSVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQTL 417
>gi|281418359|ref|ZP_06249379.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
gi|281409761|gb|EFB40019.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
Length = 503
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L I++ FG + +I AN +++ D+I + Q L IP+ V
Sbjct: 3 YTVQPGDSLYTISQR-FGVTIA--QIKSANQLTS-DIIYVSQRLYIPIGIQAPVV----- 53
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ V G + LIA+++ T D+LM LN + ++L G+ L +PL
Sbjct: 54 ----YTVRPGDTLYLIARRYNTTVDSLMALNNL-SSTELRIGQQLTIPL 97
>gi|374813996|ref|ZP_09717733.1| LysM domain/M23/M37 peptidase domain-containing protein [Treponema
primitia ZAS-1]
Length = 427
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV++ D + IA T + + I+ +N ISN ++ G+ + IP + D +
Sbjct: 193 YTVQRGDSVSKIAAT---RSISMDAIIASNGISNARRLREGETIRIP---NMDGI----- 241
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V+ G SF+ I+ K G D ++ N I D+ + AG+ L +P
Sbjct: 242 ---PYTVKPGDSFSKISAKLGVPLDAILDANDIQSDA-ISAGQQLFIP 285
>gi|51035322|emb|CAF32671.1| hypothetical protein [Oenococcus phage fOg30]
Length = 432
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA +G YQK+ N I +P +I G+ L + S KV
Sbjct: 335 YTVQSGDTLGAIAAK-YGT--TYQKLASLNGIGSPYIIIPGEKLKVSGSVSSSSASYYKV 391
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
G + + IA K+GT L+ LNG+ + + + GE L +
Sbjct: 392 A-------SGDTLSAIASKYGTSVSKLVSLNGLKNANYIYVGENLKI 431
>gi|420912476|ref|ZP_15375788.1| hypothetical protein MA6G0125R_4001 [Mycobacterium abscessus
6G-0125-R]
gi|421020747|ref|ZP_15483803.1| hypothetical protein MA3A0122S_4990 [Mycobacterium abscessus
3A-0122-S]
gi|421026047|ref|ZP_15489090.1| hypothetical protein MA3A0731_5218 [Mycobacterium abscessus
3A-0731]
gi|392114470|gb|EIU40239.1| hypothetical protein MA6G0125R_4001 [Mycobacterium abscessus
6G-0125-R]
gi|392206470|gb|EIV32053.1| hypothetical protein MA3A0122S_4990 [Mycobacterium abscessus
3A-0122-S]
gi|392209570|gb|EIV35142.1| hypothetical protein MA3A0731_5218 [Mycobacterium abscessus
3A-0731]
Length = 443
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L +A +G Y+ I N IS+P I +G+ L IP DV V
Sbjct: 50 YTVVAGDTLSALALRFYGDAELYRLIAAVNGISDPGAIGVGRRLVIP------DVTRYTV 103
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRD---TLMKLNGIHDDSKLIAGEPL 214
V G + + +A +F D + + +NGI D + L AG L
Sbjct: 104 V-------AGDTLSALALRFYGDAELYRLIAAVNGIADPTALDAGRVL 144
>gi|345105364|gb|AEN71535.1| LysM-domain containing receptor-like kinase [Melilotus dentatus]
gi|345105378|gb|AEN71542.1| LysM-domain containing receptor-like kinase [Melilotus dentatus]
Length = 275
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 29 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 85
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 86 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTNYLEWENFNPG 142
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 143 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 202
Query: 199 LN 200
N
Sbjct: 203 EN 204
>gi|345018480|ref|YP_004820833.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033823|gb|AEM79549.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 327
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA+ + Y+ I+ NN++ P I GQ L IP
Sbjct: 57 YTVQPGDTLYLIAQKFN---VPYEAIIYTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPS 113
Query: 170 VHYA-------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
A + V+ G + IAQKFG + L+K N + + + + G+ L +P
Sbjct: 114 PPPAQKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLVNPNMIYPGQTLIIP 168
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I+ NNI NP LI GQ L IP+ S + V+ G + LIAQKF +
Sbjct: 30 IITRNNIINPSLIYPGQRLIIPVQGSY------------YTVQPGDTLYLIAQKFNVPYE 77
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
++ N + + G+ L +P
Sbjct: 78 AIIYTNNLTYPYTIYPGQKLFIP 100
>gi|378724785|gb|AFC35168.1| LysM-domain containing receptor-like kinase, partial [Melilotus
albus]
Length = 274
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 28 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 84
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 85 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTSYLEWENFNPG 141
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 142 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 201
Query: 199 LN 200
N
Sbjct: 202 EN 203
>gi|241663537|ref|YP_002981897.1| LysM domain/BON superfamily protein [Ralstonia pickettii 12D]
gi|240865564|gb|ACS63225.1| Peptidoglycan-binding LysM [Ralstonia pickettii 12D]
Length = 161
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 81 FSVPAQKPIKVPIHCICSNGTG---VSDKVPV---------YTVKKDDGLDFIARTIFGQ 128
F V + + I C N G V D++ V +TV++ D L IA+ +G
Sbjct: 70 FGVAPDQATREKIILCCGNVEGIKSVDDQMSVNTESEESQWHTVERGDTLSAIAKKFYGD 129
Query: 129 LLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
KY I EAN +SNPD I GQ L IP
Sbjct: 130 ANKYPAIFEANKPMLSNPDKIYPGQKLRIP 159
>gi|125556130|gb|EAZ01736.1| hypothetical protein OsI_23764 [Oryza sativa Indica Group]
Length = 667
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 11/148 (7%)
Query: 82 SVPAQKPIK------VPIHCICSNGTGVSDKVPVYTVKKDDGLDFI-ARTIFGQLLKYQK 134
SVP P+ VP+ C C+ G Y ++ DD F+ A + L Q
Sbjct: 92 SVPVSPPVARDGLLLVPVPCACT-AAGYYQHDAGYVIQFDDETYFVMANDTYQGLTTCQA 150
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV-VHY--AHVVEEGSSFALIAQKFGT 191
++ N + + G LT+PL C+C A V Y +++ + +A +FG
Sbjct: 151 LMAQNPAHDSLDLYPGIRLTVPLRCACPSPAQAAAGVRYLVTYLLGWDDDSSTVADRFGA 210
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
D ++ N + DDS + + VPLK
Sbjct: 211 DYQAVLFANNLTDDSTVYPFTTMLVPLK 238
>gi|406860403|gb|EKD13461.1| putative cell wall-associated hydrolase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 178
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDL 146
P+ P+ CS SD P YTVK D L IA T G L +V +N I NPD
Sbjct: 85 PVTPPVTATCSQ---TSD--PTYTVKSGDTLTIIAETKLGITLA--ALVASNPQIQNPDA 137
Query: 147 IQIGQNLTIPL 157
I +G L +PL
Sbjct: 138 IAVGDKLNVPL 148
>gi|421004840|ref|ZP_15467962.1| hypothetical protein MM2B0912S_4673 [Mycobacterium massiliense
2B-0912-S]
gi|392193543|gb|EIV19167.1| hypothetical protein MM2B0912S_4673 [Mycobacterium massiliense
2B-0912-S]
Length = 500
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L +A +G Y+ I A+ IS+P I +GQ L IP DV
Sbjct: 56 YTVAAGDTLSALALRFYGDAELYRLIAAASGISDPGAIGVGQRLVIP------DVTR--- 106
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKL----NGIHDDSKLIAGEPLDVP 217
+ V G + + +A +F D + L +L +GI D + G+ L +P
Sbjct: 107 ----YTVAAGDTLSALALRFYGDAE-LYRLIAAASGISDPGAIGVGQRLVIP 153
>gi|429122087|ref|ZP_19182688.1| LysM domain protein [Cronobacter sakazakii 680]
gi|426323412|emb|CCK13425.1| LysM domain protein [Cronobacter sakazakii 680]
Length = 161
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 TPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV---------YTVKKDDGLDFIARTIFG 127
T + S A++ I V + I G V D V V YTVKK D L I++ ++G
Sbjct: 71 TGQGLSQEAKEKILVAVGNIAGIGH-VDDNVAVATPAPESQFYTVKKGDTLSAISKEVYG 129
Query: 128 QLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+Y KI EAN +++P+ I GQ L IP
Sbjct: 130 DANQYPKIFEANKPMLTSPEKIYPGQVLRIP 160
>gi|420980096|ref|ZP_15443273.1| hypothetical protein MA6G0212_5027 [Mycobacterium abscessus
6G-0212]
gi|392164374|gb|EIU90063.1| hypothetical protein MA6G0212_5027 [Mycobacterium abscessus
6G-0212]
Length = 494
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV D L +A +G Y+ I N IS+P I +G+ L IP DV V
Sbjct: 50 YTVVAGDTLSALALRFYGDAELYRLIAAVNGISDPGAIGVGRRLVIP------DVTRYTV 103
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRD---TLMKLNGIHDDSKLIAGEPLDVP 217
V G + + +A +F D + + +NGI D + G L +P
Sbjct: 104 V-------AGDTLSALALRFYGDAELYRLIAAVNGISDPGAIGVGRRLVIP 147
>gi|115469024|ref|NP_001058111.1| Os06g0625300 [Oryza sativa Japonica Group]
gi|51091049|dbj|BAD35691.1| putative receptor protein kinase PERK1 [Oryza sativa Japonica
Group]
gi|51535719|dbj|BAD37736.1| putative receptor protein kinase PERK1 [Oryza sativa Japonica
Group]
gi|113596151|dbj|BAF20025.1| Os06g0625300 [Oryza sativa Japonica Group]
gi|125597910|gb|EAZ37690.1| hypothetical protein OsJ_22030 [Oryza sativa Japonica Group]
Length = 667
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 11/148 (7%)
Query: 82 SVPAQKPIK------VPIHCICSNGTGVSDKVPVYTVKKDDGLDFI-ARTIFGQLLKYQK 134
SVP P+ VP+ C C+ G Y ++ DD F+ A + L Q
Sbjct: 92 SVPVSPPVARDGLLLVPVPCACT-AAGYYQHDAGYVIQFDDETYFVMANDTYQGLTTCQA 150
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV-VHY--AHVVEEGSSFALIAQKFGT 191
++ N + + G LT+PL C+C A V Y +++ + +A +FG
Sbjct: 151 LMAQNPAHDSLDLYPGIRLTVPLRCACPSPAQAAAGVRYLVTYLLGWDDDSSTVADRFGA 210
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
D ++ N + DDS + + VPLK
Sbjct: 211 DYQAVLFANNLTDDSTVYPFTTMLVPLK 238
>gi|345105362|gb|AEN71534.1| LysM-domain containing receptor-like kinase [Melilotus dentatus]
Length = 275
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 29 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 85
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 86 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTNYLEWENFNPG 142
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 143 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 202
Query: 199 LN 200
N
Sbjct: 203 EN 204
>gi|345105360|gb|AEN71533.1| LysM-domain containing receptor-like kinase [Melilotus officinalis]
Length = 274
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 28 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 84
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 85 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTNYLEWENFNPG 141
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 142 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 201
Query: 199 LN 200
N
Sbjct: 202 EN 203
>gi|257088860|ref|ZP_05583221.1| predicted protein [Enterococcus faecalis CH188]
gi|256997672|gb|EEU84192.1| predicted protein [Enterococcus faecalis CH188]
Length = 134
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 32 VPDKQPEATHVVQYGETLSSIAYQ-YGT--DYQTLAALNGLANPNLIYPGQVLKV----- 83
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLD 215
N VV + V+ G + + IA K GT L LNG+ + + + G+ L+
Sbjct: 84 -----NGSVVSNVYTVQYGDNLSNIAAKLGTTYQALAALNGLANPNLIYPGQTLN 133
>gi|395214303|ref|ZP_10400522.1| LysM domain-containing protein [Pontibacter sp. BAB1700]
gi|394456347|gb|EJF10657.1| LysM domain-containing protein [Pontibacter sp. BAB1700]
Length = 104
Score = 42.4 bits (98), Expect = 0.36, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNIS---NPDLIQIGQNLTIP 156
VYTV+ D L IA+ ++G + +I EAN + NPDLI+ GQ IP
Sbjct: 52 VYTVQSGDSLSKIAKKLYGDANAWNRIYEANKDTIGGNPDLIRPGQRFKIP 102
>gi|423068748|ref|ZP_17057536.1| hypothetical protein HMPREF9682_00757 [Streptococcus intermedius
F0395]
gi|355366048|gb|EHG13767.1| hypothetical protein HMPREF9682_00757 [Streptococcus intermedius
F0395]
Length = 434
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA T +G YQ++ N ISNP+ I +GQ L + +
Sbjct: 336 YTVQPGDTLSGIA-TQYG--TTYQQLAALNGISNPNYIYVGQVLKL----MGQGQSAPQN 388
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDD 205
V Y H + G + + +A ++GT + + LNG+ D
Sbjct: 389 VSY-HTAQWGDTLSGMAAQYGTTVENIQALNGLSSD 423
>gi|229545426|ref|ZP_04434151.1| endolysin [Enterococcus faecalis TX1322]
gi|229309462|gb|EEN75449.1| endolysin [Enterococcus faecalis TX1322]
Length = 413
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 311 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 362
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L
Sbjct: 363 -----NGLVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQTL 411
>gi|422686404|ref|ZP_16744602.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX4000]
gi|315028918|gb|EFT40850.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX4000]
Length = 413
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 103 VSDKVP--VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
V DK+P + V+ + L IA +G YQ + N ++NP+LI GQ L +
Sbjct: 311 VPDKLPEATHVVQYGETLSSIAYQ-YGT--NYQTLAALNGLTNPNLIYPGQILKV----- 362
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
N VV + V+ G + + IA K GT TL LNG+ + + + G+ L
Sbjct: 363 -----NGLVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYPGQTL 411
>gi|383762432|ref|YP_005441414.1| hypothetical protein CLDAP_14770 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382700|dbj|BAL99516.1| hypothetical protein CLDAP_14770 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 295
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 144 PDLIQIGQNLTIPLPCSCDDVDNAKVVHYA---HVVEEGSSFALIAQKFGTDRDTLMKLN 200
P+L+++GQNL IP V +V+ H V+ G + IAQ++G + +M N
Sbjct: 224 PNLLRVGQNLIIP------GVTLRQVMERRGTWHTVQSGETLFSIAQRYGVSIEAIMAAN 277
Query: 201 GIHDDSKLIAGEPLDVP 217
+ D + ++ G+ L +P
Sbjct: 278 DLRDPNTIVVGQRLLIP 294
>gi|378724793|gb|AFC35172.1| LysM-domain containing receptor-like kinase, partial [Melilotus
albus]
Length = 274
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 28 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 84
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 85 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTNYLEWENFNPG 141
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L++ KFG + ++
Sbjct: 142 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVSSKFGASQADMLT 201
Query: 199 LN 200
N
Sbjct: 202 EN 203
>gi|365969380|ref|YP_004950941.1| protein YgaU [Enterobacter cloacae EcWSU1]
gi|365748293|gb|AEW72520.1| YgaU [Enterobacter cloacae EcWSU1]
Length = 185
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I++ ++G +YQ+I EAN +++PD I GQ L IP
Sbjct: 135 YTVKSGDTLSAISKAMYGSANEYQRIFEANKPMLTHPDKIYPGQVLIIP 183
>gi|419759078|ref|ZP_14285387.1| putative holin [Oenococcus oeni AWRIB304]
gi|4105636|gb|AAD02487.1| lys [Leuconostoc phage 10MC]
gi|399904200|gb|EJN91659.1| putative holin [Oenococcus oeni AWRIB304]
Length = 432
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA +G YQK+ N I +P +I G+ L + S KV
Sbjct: 335 YTVQSGDTLGAIAAK-YGTT--YQKLASLNGIGSPYIIIPGEKLKVSGSVSSSSASYYKV 391
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
G + + IA K+GT L+ LNG+ + + + GE L +
Sbjct: 392 A-------SGDTLSAIASKYGTSVSKLVSLNGLKNANYIYVGENLKI 431
>gi|311028949|ref|ZP_07707039.1| glycoside hydrolase family 18 [Bacillus sp. m3-13]
Length = 436
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
Q I+EAN++ NPD + +GQ L IP +V + V++G + IA+K+
Sbjct: 24 QDIIEANDLPNPDRLVVGQALVIP------------IVGRFYFVQQGDTIFSIARKYNIT 71
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVP 217
+ L+ +N ++ + L G L +P
Sbjct: 72 PEQLIDINQLNPAAPLRVGLRLYIP 96
>gi|452943384|ref|YP_007499549.1| Peptidase M23 [Hydrogenobaculum sp. HO]
gi|452881802|gb|AGG14506.1| Peptidase M23 [Hydrogenobaculum sp. HO]
Length = 353
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
Y ++K D +D IA + + I EAN ++ + IGQ + IP K
Sbjct: 29 YKIRKGDTIDGIAHKFH---VYTKSIKEANPSLRKHKFLSIGQKICIPYKPK-----RPK 80
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ ++ V+ G + +++A++FGT L +LN +H + L GE + VP
Sbjct: 81 IPTMSYKVKSGDTLSVLAKRFGTSVRELKELNNLHRNF-LRVGETIKVP 128
>gi|423335079|ref|ZP_17312857.1| putative muramidase [Lactobacillus reuteri ATCC 53608]
gi|337728600|emb|CCC03706.1| putative muramidase [Lactobacillus reuteri ATCC 53608]
Length = 565
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 19/141 (13%)
Query: 112 VKKDDGLDFIARTIFGQL-LKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK-- 168
VK D L IA G+ Y ++ + N+ISNP++I++GQ LT+ + + + +
Sbjct: 391 VKSGDTLSGIA----GKFNTTYTQLAQLNHISNPNVIRVGQVLTLHQTVAQNTTTSQQES 446
Query: 169 --------VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKA 220
V + + V+ G + + IA +F T L N I + + + G+ L + A
Sbjct: 447 QQNKQVTTVANGTYTVKSGDTLSQIAARFNTTTSALASTNHISNPNLIEVGQQLRINNNA 506
Query: 221 CNSSIKADSFDNYLRVANGTY 241
S+ KA S +Y NG+Y
Sbjct: 507 --SAQKATS--HYSTTNNGSY 523
>gi|375133955|ref|YP_004994605.1| putative bifunctional protein [Acinetobacter calcoaceticus PHEA-2]
gi|325121400|gb|ADY80923.1| putative bifunctional protein [Acinetobacter calcoaceticus PHEA-2]
Length = 1071
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 103 VSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCD 162
VS + Y V++ D L IA + ++ E NN+ +Q+GQ L +P S
Sbjct: 781 VSYRTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGLSVP 837
Query: 163 DVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 838 E---------QYVVQSGDSLNAIASKYNLQTSYLADLNGLSRTAGLRAGQRLKL 882
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK + L+ IA + +++ E N + +Q GQN+ IP V
Sbjct: 977 YTVKSGESLNSIASRAG---ISVRELAEMNALKANANLQRGQNIVIP----------KTV 1023
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V Y V+ G + +A K+G + + L +LN + ++L G+ + VP
Sbjct: 1024 VEYK--VKRGDTLIGLASKYGLETNLLAELNNLTPSTQLRIGDVIKVP 1069
>gi|345105370|gb|AEN71538.1| LysM-domain containing receptor-like kinase [Melilotus dentatus]
Length = 274
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 11/182 (6%)
Query: 24 TAQDFKCSAQTAARCQALVGYLP--PNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNF 81
+ F C A + C+ V Y PN +++ I +F++ L I A+N +
Sbjct: 28 SGTKFTCPADSPPSCETYVTYRAKSPNFLSLTNISDIFSMSPL-PIAKASNIEAEDSK-- 84
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+P Q + +P+ C C+ ++ YT+K+ D ++ + L Y + N
Sbjct: 85 LIPDQL-LLIPVTCGCNKNGSFANIT--YTIKQGDSYFILSTISYQNLTNYLEWENFNPG 141
Query: 142 SNPDLIQIGQNLTIPLPCSCDDVDNA-KVVHY--AHVVEEGSSFALIAQKFGTDRDTLMK 198
P L+ + +PL C C + K + Y +V + + L+ KFG + ++
Sbjct: 142 LRPTLLSKDIKIVVPLSCKCPSKNQLNKGIKYLITYVWQANDNVTLVGSKFGASQADMLT 201
Query: 199 LN 200
N
Sbjct: 202 EN 203
>gi|296129907|ref|YP_003637157.1| Lytic transglycosylase catalytic [Cellulomonas flavigena DSM 20109]
gi|296021722|gb|ADG74958.1| Lytic transglycosylase catalytic [Cellulomonas flavigena DSM 20109]
Length = 445
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D + IA T G + +V AN + I+ GQ LTIP
Sbjct: 169 YTVRTGDTVSAIA-TRHGTTVA--AVVAANGLDRRAFIRAGQTLTIPGAGHAAPATAPVA 225
Query: 170 VHY---AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ V G + + IA + GT +M NG+ + + AG+ L +P
Sbjct: 226 AASTAGSYTVRTGDTVSAIATRHGTTVAAVMAANGLDQRASIRAGQTLTIP 276
>gi|242372707|ref|ZP_04818281.1| autolysin (N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis M23864:W1]
gi|242349624|gb|EES41225.1| autolysin (N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis M23864:W1]
Length = 334
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VYTVK D L IA +G Y+KI++ N ++N LI GQ L + S +
Sbjct: 89 VYTVKAGDSLSSIAAK-YGT--TYKKIMQLNGLNN-YLILPGQKLKVSGSVSNSSSSSKA 144
Query: 169 VVHY------AHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V+ G S +LIA K+GT +M LNG+ + + G+ L VP
Sbjct: 145 SKSKSTGRTSTYTVQYGDSLSLIASKYGTTYQKIMSLNGL-SNFFIYPGQQLKVP 198
>gi|429092292|ref|ZP_19154930.1| FIG00553508: hypothetical protein [Cronobacter dublinensis 1210]
gi|426742954|emb|CCJ81043.1| FIG00553508: hypothetical protein [Cronobacter dublinensis 1210]
Length = 148
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 TPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV---------YTVKKDDGLDFIARTIFG 127
T S A++ I V + I G V+D V V YTVKK D L I++ ++G
Sbjct: 58 TGEGLSQEAKEKILVAVGNIAGIGH-VADNVAVASPAPESQYYTVKKGDTLSAISKDVYG 116
Query: 128 QLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+Y KI EAN +++P+ I GQ L IP
Sbjct: 117 DANQYPKIFEANKPMLTSPEKIYPGQVLRIP 147
>gi|339451196|ref|ZP_08654566.1| peptidoglycan hydrolase/muramidase [Leuconostoc lactis KCTC 3528]
Length = 178
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 24/121 (19%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA + ++ NN+S +I GQ LTI + +NA V
Sbjct: 52 YTVKSGDTLSAIAA---ANGVSLANLLSWNNLSLQAIIYPGQKLTI------QNANNATV 102
Query: 170 V---------------HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
+ ++ V+ G + IA K GT+ TL+ LNG+ S + G+ L
Sbjct: 103 TTPNAPTSTPTVMPSTNGSYTVKSGDTLYGIAAKLGTNVQTLLSLNGLQLSSTIYVGQVL 162
Query: 215 D 215
Sbjct: 163 K 163
>gi|422732571|ref|ZP_16788902.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0645]
gi|315161388|gb|EFU05405.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0645]
Length = 419
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ + N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 345 YQTLAALNGLANPNLIYPGQVLKV----------NGSVVSKIYTVQYGDNLSSIAAKLGT 394
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + G+ L
Sbjct: 395 TYQTLAALNGLANPNLIYPGQTL 417
>gi|253682833|ref|ZP_04863628.1| 2',3'-cyclic-nucleotide 2'-phosphodiesterase [Clostridium botulinum
D str. 1873]
gi|253561032|gb|EES90486.1| 2',3'-cyclic-nucleotide 2'-phosphodiesterase [Clostridium botulinum
D str. 1873]
Length = 685
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VY VK D L +IART +G + ++++V+ N + NP++I GQ + IP+ + ++ +
Sbjct: 582 VYFVKSGDTLKYIART-YG--VSWRELVKFNKLDNPNMIFPGQKILIPVEGAKENSN--- 635
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ +VV+ + I +G + K N +++ + + + + +P
Sbjct: 636 -IKDTYVVKRYDTLKKIGNMYGIGWRRIAKFNKLNNPNMIFENQKILIP 683
>gi|138893693|ref|YP_001124146.1| spore peptidoglycan hydrolase [Geobacillus thermodenitrificans
NG80-2]
gi|196251179|ref|ZP_03149854.1| glycoside hydrolase family 18 [Geobacillus sp. G11MC16]
gi|134265206|gb|ABO65401.1| Spore peptidoglycan hydrolase, N-acetylglucosaminidase [Geobacillus
thermodenitrificans NG80-2]
gi|196209305|gb|EDY04089.1| glycoside hydrolase family 18 [Geobacillus sp. G11MC16]
Length = 428
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 12/85 (14%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
++IV AN + NPD + +GQ L IP +V + V+ G S IA++F
Sbjct: 24 EEIVRANKLPNPDELVVGQTLVIP------------IVGRFYWVQRGDSLWSIARRFSLP 71
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVP 217
L ++N + ++ L G+ L +P
Sbjct: 72 MQRLAEVNRLSLNAPLRVGQRLYIP 96
>gi|24374107|ref|NP_718150.1| membrane-bound lytic peptidoglycan transglycosylase D [Shewanella
oneidensis MR-1]
gi|24348597|gb|AAN55594.1| membrane-bound lytic peptidoglycan transglycosylase D [Shewanella
oneidensis MR-1]
Length = 515
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y VK D L IA+ + +++ N++S +Q GQ LTI P D ++ +
Sbjct: 405 YQVKSGDSLWQIAQ---AHNVSVKQLTAWNHLSKDSKLQTGQKLTIVAPQEKLDSEHIRT 461
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
V Y V+ G S A IA KF L++ N + ++ G+ L + + N
Sbjct: 462 VSYK--VKSGDSLAQIASKFKVTVAELLEWNSLTPSQYILPGQVLKLVVDESN 512
>gi|381197709|ref|ZP_09905049.1| soluble lytic murein transglycosylase [Acinetobacter lwoffii
WJ10621]
Length = 1089
Score = 42.0 bits (97), Expect = 0.41, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 22/155 (14%)
Query: 72 NFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV----------YTVKKDDGLDFI 121
+ PG ++ + I VP++ + S T + PV Y V++ D L I
Sbjct: 756 DLTPGLNAGSNLLVGQKINVPLNDVKSLTTSSAKAFPVKAEPQFKVESYKVQRGDTLYSI 815
Query: 122 ARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSS 181
A + ++ + NN+S +Q+GQ++ IP + D + V+ G S
Sbjct: 816 ASQ---SKMSLSELADLNNLSTNSGLQVGQSIKIPAGSTVPD---------TYTVQSGDS 863
Query: 182 FALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
IA K+ D + LN + + L AG+ L +
Sbjct: 864 LTAIASKYNLGMDYIADLNNMSRTAGLRAGQKLKL 898
Score = 37.7 bits (86), Expect = 8.3, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 23/132 (17%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
T ++ ++ VK + L+ IAR QL + E NN+S +++GQ L I
Sbjct: 916 TASNNSTDIHVVKSGETLNSIARKYHLQL---NYLAELNNLSRTANVRVGQRLKIE---- 968
Query: 161 CDDVDNAKV---------------VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDD 205
DVD+A V A+ V+ G S IA + G L LN +
Sbjct: 969 -GDVDSAPVKTETVAAKSQATSGRATEAYKVKSGESLNSIASRAGMSVSELASLNNLSAR 1027
Query: 206 SKLIAGEPLDVP 217
+ L G+ + +P
Sbjct: 1028 AGLQVGQTIQIP 1039
>gi|339496776|ref|ZP_08657752.1| muramidase [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 381
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 112 VKKDDGLDFIA---RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VK D L IA T +L K NNISN +LI G +L + S V
Sbjct: 33 VKSGDTLSAIAAANNTTVAELAK------NNNISNENLILTGTSL--EVSTSTQSVSGLS 84
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
++ V+ G + + IA+K G TL LNG+ + + ++ G+ L +
Sbjct: 85 SDGSSYTVQSGDTLSKIAEKTGVSVSTLTSLNGVSNQNLILTGQELSLK 133
>gi|319655045|ref|ZP_08009115.1| spore peptidoglycan hydrolase [Bacillus sp. 2_A_57_CT2]
gi|317393269|gb|EFV74037.1| spore peptidoglycan hydrolase [Bacillus sp. 2_A_57_CT2]
Length = 428
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 123 RTIFGQLLKY----QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEE 178
+++FG Y + ++EAN I NP+ + IGQ L IP ++ + V+
Sbjct: 10 QSLFGIAQAYGTTVEDLIEANEIPNPNNLVIGQTLVIP------------IIGRFYWVQP 57
Query: 179 GSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
G S I+++FG L +NGI L G L +P
Sbjct: 58 GDSLYSISRRFGISYQQLASVNGISVSQPLQVGFRLYIP 96
>gi|429087054|ref|ZP_19149786.1| FIG00553508: hypothetical protein [Cronobacter universalis NCTC
9529]
gi|426506857|emb|CCK14898.1| FIG00553508: hypothetical protein [Cronobacter universalis NCTC
9529]
Length = 148
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 TPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV---------YTVKKDDGLDFIARTIFG 127
T + S A++ I V + I G V D V V YTVKK D L I++ ++G
Sbjct: 58 TGQGLSQEAKEKILVAVGNIAGIGH-VDDNVAVASPAPESQYYTVKKGDTLSAISKEVYG 116
Query: 128 QLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+Y KI EAN +++P+ I GQ L IP
Sbjct: 117 DANQYPKIFEANKPMLTSPEKIYPGQVLRIP 147
>gi|345021881|ref|ZP_08785494.1| 2',3'-cyclic-nucleotide 2'-phosphodiesterase [Ornithinibacillus
scapharcae TW25]
Length = 605
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN------ISNPDLIQIGQNLTIP 156
Y VK D L IA+ I+G+ ++++KI EAN ISNP+ I IGQ L +P
Sbjct: 553 YIVKAGDSLWTIAKDIYGKGIEWKKIYEANKKSNGGVISNPNRIYIGQYLLLP 605
>gi|260598347|ref|YP_003210918.1| LysM domain/BON superfamily protein [Cronobacter turicensis z3032]
gi|260217524|emb|CBA31713.1| Uncharacterized protein ygaU [Cronobacter turicensis z3032]
Length = 148
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 TPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV---------YTVKKDDGLDFIARTIFG 127
T + S A++ I V + I G V D V V YTVKK D L I++ ++G
Sbjct: 58 TGQGLSQEAKEKILVAVGNIAGIGH-VDDNVAVASPAPESQYYTVKKGDTLSAISKEVYG 116
Query: 128 QLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+Y KI EAN +++P+ I GQ L IP
Sbjct: 117 DANQYPKIFEANKPMLTSPEKIYPGQVLRIP 147
>gi|392939532|ref|ZP_10305176.1| putative glycosyl hydrolase [Thermoanaerobacter siderophilus SR4]
gi|392291282|gb|EIV99725.1| putative glycosyl hydrolase [Thermoanaerobacter siderophilus SR4]
Length = 327
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA+ + Y+ I+ NN++ P I GQ L IP
Sbjct: 57 YTVQPGDTLYLIAQKFN---VPYEAIIYTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPS 113
Query: 170 VHYA-------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
A + V+ G + IAQKFG + L+K N + + + + G+ L +P
Sbjct: 114 PPPAQKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLINPNMIYPGQTLIIP 168
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I+ NNI NP LI GQ L IP+ S + V+ G + LIAQKF +
Sbjct: 30 IITRNNIINPSLIYPGQRLIIPVQGSY------------YTVQPGDTLYLIAQKFNVPYE 77
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
++ N + + G+ L +P
Sbjct: 78 AIIYTNNLTYPYTIYPGQKLFIP 100
>gi|119384736|ref|YP_915792.1| LysM domain/BON superfamily protein [Paracoccus denitrificans
PD1222]
gi|119374503|gb|ABL70096.1| Peptidoglycan-binding LysM [Paracoccus denitrificans PD1222]
Length = 161
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 89 IKVPIHCICSNGTGVSDKVP-----VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--I 141
IK H ++G G P +TV+K + L IA+ G+ +Y +I EAN +
Sbjct: 85 IKGIAHVELADGAGSETPAPSTQPVFHTVQKGETLSAIAQKYLGKANRYPEIFEANKPML 144
Query: 142 SNPDLIQIGQNLTIP 156
S+PD I GQ L IP
Sbjct: 145 SHPDKIYPGQTLRIP 159
>gi|408387200|gb|AFU64206.1| hypothetical protein [Salmonella phage STML-13-1]
Length = 102
Score = 42.0 bits (97), Expect = 0.42, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLP 158
Y VK D L IA ++G +Y K+ NNI NP I +GQ + +P P
Sbjct: 5 YIVKPGDTLSSIALKLYGDAQQYIKLARFNNIQNPGHIAVGQVICLPTP 53
>gi|359398081|ref|ZP_09191105.1| membrane protein [Novosphingobium pentaromativorans US6-1]
gi|357600499|gb|EHJ62194.1| membrane protein [Novosphingobium pentaromativorans US6-1]
Length = 417
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 28/158 (17%)
Query: 81 FSVPAQKPIKVPIHCI-CSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLK----YQKI 135
F V A + +++P S GTGVS + Y V T+FG + I
Sbjct: 66 FIVRAGQELEIPRGGAGVSAGTGVSTRSGTYEVT-------FGETLFGVANRTGTSASAI 118
Query: 136 VEANNISNPDLIQIGQNLTIP---------------LPCSCDDVD-NAKVVHYAHVVEEG 179
AN + P +++IGQ LTIP +P D A H+V G
Sbjct: 119 ASANGLEPPYVLRIGQKLTIPGKSQDATAVRTASRVIPARGDTASATAPEEETVHLVTPG 178
Query: 180 SSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ IAQ+ R + + NG+ + G+ L +P
Sbjct: 179 ETLGGIAQRAKVARILIAEANGLEPPYVVKVGQKLQIP 216
>gi|156933549|ref|YP_001437465.1| LysM domain/BON superfamily protein [Cronobacter sakazakii ATCC
BAA-894]
gi|389840583|ref|YP_006342667.1| LysM domain/BON superfamily protein [Cronobacter sakazakii ES15]
gi|417790517|ref|ZP_12438065.1| LysM domain/BON superfamily protein [Cronobacter sakazakii E899]
gi|424800024|ref|ZP_18225566.1| FIG00553508: hypothetical protein [Cronobacter sakazakii 696]
gi|429105077|ref|ZP_19166946.1| FIG00553508: hypothetical protein [Cronobacter malonaticus 681]
gi|429110743|ref|ZP_19172513.1| FIG00553508: hypothetical protein [Cronobacter malonaticus 507]
gi|429115985|ref|ZP_19176903.1| FIG00553508: hypothetical protein [Cronobacter sakazakii 701]
gi|449307871|ref|YP_007440227.1| LysM domain/BON superfamily protein [Cronobacter sakazakii SP291]
gi|156531803|gb|ABU76629.1| hypothetical protein ESA_01369 [Cronobacter sakazakii ATCC BAA-894]
gi|333955392|gb|EGL73146.1| LysM domain/BON superfamily protein [Cronobacter sakazakii E899]
gi|387851059|gb|AFJ99156.1| LysM domain/BON superfamily protein [Cronobacter sakazakii ES15]
gi|423235745|emb|CCK07436.1| FIG00553508: hypothetical protein [Cronobacter sakazakii 696]
gi|426291800|emb|CCJ93059.1| FIG00553508: hypothetical protein [Cronobacter malonaticus 681]
gi|426311900|emb|CCJ98626.1| FIG00553508: hypothetical protein [Cronobacter malonaticus 507]
gi|426319114|emb|CCK03016.1| FIG00553508: hypothetical protein [Cronobacter sakazakii 701]
gi|449097904|gb|AGE85938.1| LysM domain/BON superfamily protein [Cronobacter sakazakii SP291]
Length = 148
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 TPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV---------YTVKKDDGLDFIARTIFG 127
T + S A++ I V + I G V D V V YTVKK D L I++ ++G
Sbjct: 58 TGQGLSQEAKEKILVAVGNIAGIGH-VDDNVAVATPAPESQFYTVKKGDTLSAISKEVYG 116
Query: 128 QLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+Y KI EAN +++P+ I GQ L IP
Sbjct: 117 DANQYPKIFEANKPMLTSPEKIYPGQVLRIP 147
>gi|375088504|ref|ZP_09734842.1| hypothetical protein HMPREF9703_00924 [Dolosigranulum pigrum ATCC
51524]
gi|374561469|gb|EHR32808.1| hypothetical protein HMPREF9703_00924 [Dolosigranulum pigrum ATCC
51524]
Length = 745
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 135 IVEANNISNPDLIQIGQNLTIPL------PCSCDDVDNAKVVHYAH-VVEEGSSFALIAQ 187
+V+ NNISNP+LI +GQ LT+ L P S AK H V+ G S IAQ
Sbjct: 657 LVKWNNISNPNLIWVGQKLTVRLNVGHVKPSSSKLAKPAKPKAPRHYTVQRGDSLWAIAQ 716
Query: 188 KFGTDRDTLMKLNGI 202
K T L +LN +
Sbjct: 717 KHNTTIPQLKQLNKL 731
>gi|229164822|ref|ZP_04292646.1| Cell wall hydrolase [Bacillus cereus R309803]
gi|228618646|gb|EEK75648.1| Cell wall hydrolase [Bacillus cereus R309803]
Length = 265
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 88 PIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFG---QLLKYQKIVEANNISNP 144
P+ + I SN G + VYTV+K+D ++ I++ +G QLLK +AN+ N
Sbjct: 11 PLSAAMITIISNPVGAAAST-VYTVQKNDTMEAISKQ-YGVSVQLLK-----QANSKVN- 62
Query: 145 DLIQIGQNLTIPLPCSCDDV---DNAKV----VHYAHVVEEGSSFALIAQKFGTDRDTLM 197
D I IG++LTIP + ++ +N+ V + V+ G + + I+Q++ ++
Sbjct: 63 DQINIGESLTIPGSSTANEYVQNNNSTVSTNTYQAIYQVKSGDTLSSISQQYKVSIQSIK 122
Query: 198 KLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANG 239
+ N I D + + G+ L + N+ I D R+ N
Sbjct: 123 QNNKI-DGNHIFVGQHLKI-----NTGISLQEVDLMARLVNA 158
>gi|85818584|gb|EAQ39744.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|376316330|emb|CCF99724.1| BON and LysM domain containing protein [uncultured Dokdonia sp.]
Length = 166
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 14/81 (17%)
Query: 90 KVPIHCICSNGTGVS---DKVPV---------YTVKKDDGLDFIARTIFGQLLKYQKIVE 137
K + + N TG++ D++ V YTV+K D L I++ ++G +KY +I E
Sbjct: 82 KEKVILVVGNSTGIATVDDRLTVENPEPEARFYTVEKGDSLSKISKAMYGDPMKYPQIFE 141
Query: 138 ANN--ISNPDLIQIGQNLTIP 156
AN + + DLI GQ L IP
Sbjct: 142 ANKPMLKDVDLIYPGQVLRIP 162
>gi|387792179|ref|YP_006257244.1| LysM domain-containing protein [Solitalea canadensis DSM 3403]
gi|379655012|gb|AFD08068.1| LysM domain-containing protein [Solitalea canadensis DSM 3403]
Length = 123
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN--NISNPDLIQIGQNLTIP 156
YTV+ D L IA+ G L +QKI EAN ISNPDLI+ GQ L IP
Sbjct: 76 YTVQPGDNLSKIAQKYSG--LTWQKIFEANKDQISNPDLIKPGQVLKIP 122
>gi|422690330|ref|ZP_16748387.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0630]
gi|315576701|gb|EFU88892.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0630]
Length = 413
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ + N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 339 YQTLAALNGLTNPNLIYPGQVLKV----------NGSVVSNIYTVQYGDNLSSIAAKLGT 388
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + G+ L
Sbjct: 389 TYQTLAALNGLANPNLIYPGQTL 411
>gi|429100989|ref|ZP_19162963.1| FIG00553508: hypothetical protein [Cronobacter turicensis 564]
gi|426287638|emb|CCJ89076.1| FIG00553508: hypothetical protein [Cronobacter turicensis 564]
Length = 148
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 TPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV---------YTVKKDDGLDFIARTIFG 127
T + S A++ I V + I G V D V V YTVKK D L I++ ++G
Sbjct: 58 TGQGLSQEAKEKILVAVGNIAGIGH-VDDNVAVTTPAPESQYYTVKKGDTLSAISKEVYG 116
Query: 128 QLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+Y KI EAN +++P+ I GQ L IP
Sbjct: 117 DANQYPKIFEANKPMLTSPEKIYPGQVLRIP 147
>gi|418658318|ref|ZP_13220050.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-111]
gi|375038870|gb|EHS31825.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-111]
Length = 372
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|336320557|ref|YP_004600525.1| Lytic transglycosylase catalytic [[Cellvibrio] gilvus ATCC 13127]
gi|336104138|gb|AEI11957.1| Lytic transglycosylase catalytic [[Cellvibrio] gilvus ATCC 13127]
Length = 388
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV++ D + IA + I AN +++ I++GQ L IP S D +
Sbjct: 44 YTVREGDTVSHIAARTGASV---SSIASANALTDVSRIRVGQVLAIP-SASGDGSTRTRT 99
Query: 170 --VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ V G + + IA + G+ ++ NG+ D+ ++ G+ L +P
Sbjct: 100 PSASASWTVRPGDTVSAIAARTGSSVAAIVSANGLGSDAMIVVGQRLRIP 149
>gi|168015311|ref|XP_001760194.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688574|gb|EDQ74950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 438
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVP---VYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
S+ +P+ +P +C C + D++ + V++ + + FI++ I+ L K I
Sbjct: 88 SIVTHQPLYIPFNCGC-----IQDQLLHMFKHQVQRTNTIGFISKKIYEDLTKETWIGYW 142
Query: 139 NNISNPDLIQIGQNLTIPLPCSCDD 163
N I N + I+ G ++ IP+ C C D
Sbjct: 143 NGIPNLNFIETGTSMKIPVQCFCGD 167
>gi|358635198|dbj|BAL22495.1| LysM domain/BON superfamily protein [Azoarcus sp. KH32C]
Length = 160
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+TVK D L IA+T +G KY I EAN +S+PD I GQ L IP
Sbjct: 109 HTVKSGDTLSAIAKTYYGDANKYNAIFEANKPMLSHPDKIYPGQVLRIP 157
>gi|443635175|ref|ZP_21119342.1| spore peptidoglycan hydrolase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443344987|gb|ELS59057.1| spore peptidoglycan hydrolase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 427
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 112 VKKDDGLDFIA---RTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
VK+ D L IA RT + I E N I NPD + +GQ + IP+ D
Sbjct: 2 VKQGDTLSAIASQYRTTVSE------ITETNEIPNPDSLVVGQTIVIPIAGQFYD----- 50
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
V++G + IAQ+F T L ++N I ++ L G L +P
Sbjct: 51 -------VQQGDTLTSIAQQFNTTAAELARVNRIQLNTVLQIGFRLYIP 92
>gi|418424387|ref|ZP_12997509.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS1]
gi|387720294|gb|EIK08206.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS1]
Length = 372
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|284035235|ref|YP_003385165.1| peptidoglycan-binding lysin domain-containing protein [Spirosoma
linguale DSM 74]
gi|283814528|gb|ADB36366.1| Peptidoglycan-binding lysin domain protein [Spirosoma linguale DSM
74]
Length = 155
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L IA+ ++G +KY I EAN + +PDLI Q L IP
Sbjct: 105 YTVKSGDSLSKIAKEVYGDPMKYGVIFEANKPMLKDPDLIYPDQVLRIP 153
>gi|159900539|ref|YP_001546786.1| peptidase M23B [Herpetosiphon aurantiacus DSM 785]
gi|159893578|gb|ABX06658.1| peptidase M23B [Herpetosiphon aurantiacus DSM 785]
Length = 539
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
+ ++ ANN++ P + IG+ L IP +V H V EG + IA+++
Sbjct: 229 ESLIAANNLTGP--VAIGETLRIP-----------RVSGVPHTVSEGETITDIAERYSVG 275
Query: 193 RDTLMKL--NGIHDDSKLIAGEPLDVP 217
D +M NG+ LIAG + VP
Sbjct: 276 ADVIMTFPPNGLDQGQALIAGREIFVP 302
>gi|433637155|ref|YP_007282915.1| LysM domain-containing protein [Halovivax ruber XH-70]
gi|433288959|gb|AGB14782.1| LysM domain-containing protein [Halovivax ruber XH-70]
Length = 220
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 104 SDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
+DK V+TV + D L IA +G ++ I E N+I NP I G+ L +P
Sbjct: 166 TDKTKVWTVTEGDTLWLIASEEYGDPSHWRTIAEKNDIENPRAIAAGERLELP 218
>gi|387929627|ref|ZP_10132304.1| glycoside hydrolase family 18 [Bacillus methanolicus PB1]
gi|387586445|gb|EIJ78769.1| glycoside hydrolase family 18 [Bacillus methanolicus PB1]
Length = 470
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 21/121 (17%)
Query: 102 GVSDKVPV----YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
G+S +PV +TV+ + L IA+ +G + IV+AN IS+P I G L IP
Sbjct: 41 GLSLVIPVAARQHTVRARETLWQIAQR-YG--VSVGAIVQANQISDPSRIYPGLVLYIP- 96
Query: 158 PCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
A+V H V+ G S IAQ++GT +++ N I + + G L +P
Sbjct: 97 ---------ARV----HTVQPGESLRQIAQRYGTTVQEIIRTNQIQNPDLIYPGMALTIP 143
Query: 218 L 218
Sbjct: 144 F 144
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
V+TV+ + L IA+ +G + Q+I+ N I NPDLI G LTIP P DV NA
Sbjct: 99 VHTVQPGESLRQIAQR-YGTTV--QEIIRTNQIQNPDLIYPGMALTIPFPKQVIDV-NAY 154
Query: 169 VVHYAHVVEEGS 180
+ ++ EEG+
Sbjct: 155 TI---NIGEEGA 163
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 134 KIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDR 193
+IV+AN + +P+ + IG +L IP+ H V + IAQ++G
Sbjct: 25 QIVDANKLPDPNRLLIGLSLVIPVAAR------------QHTVRARETLWQIAQRYGVSV 72
Query: 194 DTLMKLNGIHDDSKLIAGEPLDVPLK 219
+++ N I D S++ G L +P +
Sbjct: 73 GAIVQANQISDPSRIYPGLVLYIPAR 98
>gi|418308698|ref|ZP_12920304.1| Gram-positive signal peptide protein, YSIRK family, partial
[Staphylococcus aureus subsp. aureus 21194]
gi|365237724|gb|EHM78567.1| Gram-positive signal peptide protein, YSIRK family, partial
[Staphylococcus aureus subsp. aureus 21194]
Length = 278
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|328948897|ref|YP_004366234.1| peptidase M23 [Treponema succinifaciens DSM 2489]
gi|328449221|gb|AEB14937.1| Peptidase M23 [Treponema succinifaciens DSM 2489]
Length = 288
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIP--------LPCS--CDDVDNAKVVHYAHVVEEGSSF 182
+++ NN++ D++++GQ L+IP LP S + +A+ + V++G +F
Sbjct: 49 EQLCAVNNLTVNDVLKVGQKLSIPEKNVEKKILPSSSPVKNTLSAERKFDTYTVQKGDTF 108
Query: 183 ALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
IA+ G + L LN + D+ L AG+ L +P+
Sbjct: 109 YRIAKVNGISVEELKGLNNLDSDTVLKAGQRLKIPV 144
>gi|384518993|ref|YP_005706298.1| lysM domain protein [Enterococcus faecalis 62]
gi|422695371|ref|ZP_16753359.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX4244]
gi|422735750|ref|ZP_16792016.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX1341]
gi|315147654|gb|EFT91670.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX4244]
gi|315167484|gb|EFU11501.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX1341]
gi|323481126|gb|ADX80565.1| lysM domain protein [Enterococcus faecalis 62]
Length = 413
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ + N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 339 YQTLAALNGLTNPNLIYPGQILKV----------NGSVVSNIYTVQYGDNLSSIAAKLGT 388
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + G+ L
Sbjct: 389 TYQTLAALNGLANPNLIYPGQTL 411
>gi|418889039|ref|ZP_13443175.1| hypothetical protein SACIG1524_1656 [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377754549|gb|EHT78458.1| hypothetical protein SACIG1524_1656 [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 372
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|418317237|ref|ZP_12928661.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21340]
gi|365239609|gb|EHM80411.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21340]
Length = 372
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|344343522|ref|ZP_08774390.1| Lytic transglycosylase catalytic [Marichromatium purpuratum 984]
gi|343804945|gb|EGV22843.1| Lytic transglycosylase catalytic [Marichromatium purpuratum 984]
Length = 483
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
K V+ VK+ + L IAR L + + E+N++ D ++ GQ L IP
Sbjct: 382 KALVHVVKRGETLSAIARR---HDLGVRTLAESNHLDLDDTLRPGQKLRIP--------G 430
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ +V Y V G S ++IA ++G D L + N + DS+L G+ L +
Sbjct: 431 SDALVTYR--VRSGDSMSVIAHRYGVTVDDLQRWNAL-SDSRLDIGDTLRI 478
>gi|292490972|ref|YP_003526411.1| peptidoglycan-binding LysM [Nitrosococcus halophilus Nc4]
gi|291579567|gb|ADE14024.1| Peptidoglycan-binding LysM [Nitrosococcus halophilus Nc4]
Length = 296
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIPLP 158
TV+ D L IA+ ++G + K++ I EAN + NP+ + +G LT+P P
Sbjct: 246 TVQSGDSLSLIAKRVYGDVDKWRLIYEANQDRLENPNQLLVGMELTVPAP 295
>gi|255523777|ref|ZP_05390742.1| glycoside hydrolase family 18 [Clostridium carboxidivorans P7]
gi|255512480|gb|EET88755.1| glycoside hydrolase family 18 [Clostridium carboxidivorans P7]
Length = 428
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
IV +N + NP+ + +GQ L IP+ S + V+ G+S IA+ FG +
Sbjct: 26 IVGSNEVPNPNQLVVGQTLVIPIVGSY------------YWVQPGNSLYSIARSFGINYR 73
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
L ++NGI + L G L +P
Sbjct: 74 RLAQVNGISPGTPLKVGLRLYIP 96
>gi|407782609|ref|ZP_11129820.1| putative gamma-D-glutamyl-meso-diaminopimelate peptidase
[Oceanibaculum indicum P24]
gi|407205635|gb|EKE75605.1| putative gamma-D-glutamyl-meso-diaminopimelate peptidase
[Oceanibaculum indicum P24]
Length = 360
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVV 170
TV++ D L IAR + + ++EANN+ P ++++G L +P NA+
Sbjct: 60 TVRRGDTLYGIARA---NEVPLRAMIEANNLQPPYVLRVGDVLRLP---------NARF- 106
Query: 171 HYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP--LKACNSSIKAD 228
HVV G + IA+++ D +L + N + + G+ L +P ++A ++
Sbjct: 107 ---HVVAGGDTLYGIARRYDVDVSSLARANSLSAPFTIRLGQRLVLPSAVQASPATTAVA 163
Query: 229 SFDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCK--PSQFQ 269
D+ + +AN +A T + + P+Q Q
Sbjct: 164 RADDTVPLANARPAPSAEPAPSTSPSEPPTSTEETRSPPAQSQ 206
>gi|418955405|ref|ZP_13507345.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-189]
gi|375370888|gb|EHS74680.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-189]
Length = 370
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|418281429|ref|ZP_12894240.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21178]
gi|365165251|gb|EHM57079.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21178]
Length = 370
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|87161904|ref|YP_493837.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|161509413|ref|YP_001575072.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|258452546|ref|ZP_05700552.1| cell wall hydrolase LytN [Staphylococcus aureus A5948]
gi|282920031|ref|ZP_06327760.1| cell wall hydrolase lytN [Staphylococcus aureus A9765]
gi|294848242|ref|ZP_06788989.1| cell wall hydrolase lytN [Staphylococcus aureus A9754]
gi|109940094|sp|Q9ZNI1.2|LYTN_STAA8 RecName: Full=Probable cell wall hydrolase LytN; Flags: Precursor
gi|87127878|gb|ABD22392.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|160368222|gb|ABX29193.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257859764|gb|EEV82606.1| cell wall hydrolase LytN [Staphylococcus aureus A5948]
gi|282594747|gb|EFB99731.1| cell wall hydrolase lytN [Staphylococcus aureus A9765]
gi|294825042|gb|EFG41464.1| cell wall hydrolase lytN [Staphylococcus aureus A9754]
Length = 383
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>gi|397133905|gb|AFO10414.1| hypothetical protein [Escherichia phage ECML-4]
Length = 102
Score = 42.0 bits (97), Expect = 0.48, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLP 158
Y VK D L IA ++G +Y K+ NNI NP I +GQ + +P P
Sbjct: 5 YIVKPGDTLSSIALKLYGDAQQYIKLARFNNIQNPGHITVGQIICLPTP 53
>gi|335428058|ref|ZP_08554977.1| ErfK/YbiS/YcfS/YnhG [Haloplasma contractile SSD-17B]
gi|334893281|gb|EGM31497.1| ErfK/YbiS/YcfS/YnhG [Haloplasma contractile SSD-17B]
Length = 232
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 25/168 (14%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y ++K D L IA+ + + I++ N +P+ + IG+ + IPL S
Sbjct: 18 YLIRKGDTLKQIAKLYNSTV---EAIIQVNQQIDPNKLMIGETICIPL--SIQYYPTCPT 72
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
+Y ++V EG + I++ F R L N D L + L +P+ A SI D
Sbjct: 73 TNY-YIVREGDTLESISEYFNVTRQQLYYSNFGIDPDNLYQDQILCIPVSAPPVSITIDV 131
Query: 230 FDNYLRVANGTYTFTANSCVKCQCDATNNWTLQCKP-SQFQPSSPNSR 276
+ L V N NN L+ P S PS P SR
Sbjct: 132 LNRLLLVVN------------------NNRVLRTYPISLSNPSMPISR 161
>gi|386345898|ref|YP_006044147.1| Peptidoglycan-binding lysin domain-containing protein [Spirochaeta
thermophila DSM 6578]
gi|339410865|gb|AEJ60430.1| Peptidoglycan-binding lysin domain-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 334
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%)
Query: 82 SVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNI 141
+ PA PI P + S+ +YT D L +A + + Y I E N+I
Sbjct: 254 TTPAATPIPAPTQAPEAARPAPSEFTIIYTPTWGDTLWDLADSFYNNPWLYPAIAEENHI 313
Query: 142 SNPDLIQIGQNLTIP 156
NPDLI G+ L IP
Sbjct: 314 PNPDLIYAGKPLRIP 328
>gi|379795614|ref|YP_005325612.1| putative cell wall hydrolase [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872604|emb|CCE58943.1| putative cell wall hydrolase [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 372
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|418948854|ref|ZP_13501136.1| CHAP domain protein [Staphylococcus aureus subsp. aureus IS-157]
gi|375370570|gb|EHS74374.1| CHAP domain protein [Staphylococcus aureus subsp. aureus IS-157]
Length = 353
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 143 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 191
>gi|440487343|gb|ELQ67137.1| intracellular hyphae protein 1 [Magnaporthe oryzae P131]
Length = 281
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDN-----AKVVH--------------YAHV 175
I + NNI++PD I +GQ L IP +VDN A VV+ + V
Sbjct: 177 IAKENNIADPDKIDVGQVLKIPTGLCTQNVDNNSCIKAAVVNPNTDEKGTCLKTGPFTRV 236
Query: 176 VEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+++G SF IA++ G ++ +N D L+ + +++P
Sbjct: 237 IKKGDSFVGIAKELGLQEQAVVDVNPGVDRFNLLPEQTINLP 278
>gi|440471307|gb|ELQ40330.1| intracellular hyphae protein 1 [Magnaporthe oryzae Y34]
Length = 272
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDN-----AKVVH--------------YAHV 175
I + NNI++PD I +GQ L IP +VDN A VV+ + V
Sbjct: 168 IAKENNIADPDKIDVGQVLKIPTGLCTQNVDNNSCIKAAVVNPNTDEKGTCLKTGPFTRV 227
Query: 176 VEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+++G SF IA++ G ++ +N D L+ + +++P
Sbjct: 228 IKKGDSFVGIAKELGLQEQAVVDVNPGVDRFNLLPEQTINLP 269
>gi|88194955|ref|YP_499755.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|221142037|ref|ZP_03566530.1| cell wall hydrolase, putative [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|262051310|ref|ZP_06023533.1| LytN protein [Staphylococcus aureus 930918-3]
gi|284024240|ref|ZP_06378638.1| cell wall hydrolase, putative [Staphylococcus aureus subsp. aureus
132]
gi|304381189|ref|ZP_07363842.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379014438|ref|YP_005290674.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus VC40]
gi|384861841|ref|YP_005744561.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|384869781|ref|YP_005752495.1| cell wall hydrolase lytN [Staphylococcus aureus subsp. aureus
T0131]
gi|415686437|ref|ZP_11450526.1| cell wall hydrolase, putative [Staphylococcus aureus subsp. aureus
CGS01]
gi|417649463|ref|ZP_12299262.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21189]
gi|418286382|ref|ZP_12899028.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21209]
gi|418317790|ref|ZP_12929206.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21232]
gi|418570855|ref|ZP_13135116.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21283]
gi|418579078|ref|ZP_13143173.1| hypothetical protein SACIG1114_1714 [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418643014|ref|ZP_13205200.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-24]
gi|418647522|ref|ZP_13209586.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-88]
gi|418649236|ref|ZP_13211264.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-91]
gi|418873471|ref|ZP_13427766.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-125]
gi|418903456|ref|ZP_13457497.1| hypothetical protein SACIG1770_1751 [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418906182|ref|ZP_13460209.1| hypothetical protein SACIGC345D_1660 [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418911854|ref|ZP_13465837.1| hypothetical protein SACIG547_1876 [Staphylococcus aureus subsp.
aureus CIG547]
gi|418925480|ref|ZP_13479382.1| hypothetical protein SACIG2018_1618 [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928504|ref|ZP_13482390.1| hypothetical protein SACIG1612_1798 [Staphylococcus aureus subsp.
aureus CIG1612]
gi|419774402|ref|ZP_14300372.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus CO-23]
gi|422742364|ref|ZP_16796370.1| signal peptide, YSIRK family [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422745522|ref|ZP_16799461.1| signal peptide, YSIRK family [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424785077|ref|ZP_18211880.1| Putative cell wall hydrolase [Staphylococcus aureus CN79]
gi|440706063|ref|ZP_20886812.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21282]
gi|440734693|ref|ZP_20914305.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|87202513|gb|ABD30323.1| cell wall hydrolase, putative [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|259160685|gb|EEW45706.1| LytN protein [Staphylococcus aureus 930918-3]
gi|302751070|gb|ADL65247.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304340172|gb|EFM06113.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315198487|gb|EFU28816.1| cell wall hydrolase, putative [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140937|gb|EFW32784.1| signal peptide, YSIRK family [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144348|gb|EFW36114.1| signal peptide, YSIRK family [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329313916|gb|AEB88329.1| Probable cell wall hydrolase lytN [Staphylococcus aureus subsp.
aureus T0131]
gi|329727832|gb|EGG64283.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21189]
gi|365167090|gb|EHM58566.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21209]
gi|365245058|gb|EHM85710.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21232]
gi|371983035|gb|EHP00183.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21283]
gi|374363135|gb|AEZ37240.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus VC40]
gi|375016127|gb|EHS09771.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-24]
gi|375029488|gb|EHS22815.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-88]
gi|375029609|gb|EHS22934.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-91]
gi|375366008|gb|EHS70020.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-125]
gi|377697105|gb|EHT21460.1| hypothetical protein SACIG1114_1714 [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377725232|gb|EHT49347.1| hypothetical protein SACIG547_1876 [Staphylococcus aureus subsp.
aureus CIG547]
gi|377738416|gb|EHT62425.1| hypothetical protein SACIG1612_1798 [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742471|gb|EHT66456.1| hypothetical protein SACIG1770_1751 [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744549|gb|EHT68526.1| hypothetical protein SACIG2018_1618 [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377765482|gb|EHT89332.1| hypothetical protein SACIGC345D_1660 [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|383971928|gb|EID87990.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus CO-23]
gi|421956487|gb|EKU08816.1| Putative cell wall hydrolase [Staphylococcus aureus CN79]
gi|436431721|gb|ELP29074.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436507594|gb|ELP43274.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21282]
Length = 372
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|70733801|ref|YP_257441.1| LysM domain/BON superfamily protein [Pseudomonas protegens Pf-5]
gi|68348100|gb|AAY95706.1| putative phospholipid-binding domain/LysM domain protein
[Pseudomonas protegens Pf-5]
Length = 146
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
TVKK D L IA+ +G KY KI EAN +S+PD I GQ L IP
Sbjct: 98 TVKKGDTLSAIAKVQYGDANKYNKIFEANKPLLSHPDKIYPGQVLRIP 145
>gi|57651816|ref|YP_186122.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus COL]
gi|151221369|ref|YP_001332191.1| cell-wall hydrolase lytN [Staphylococcus aureus subsp. aureus str.
Newman]
gi|81694645|sp|Q5HGI5.1|LYTN_STAAC RecName: Full=Probable cell wall hydrolase LytN; Flags: Precursor
gi|57286002|gb|AAW38096.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus COL]
gi|150374169|dbj|BAF67429.1| cell-wall hydrolase lytN [Staphylococcus aureus subsp. aureus str.
Newman]
Length = 383
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>gi|385781475|ref|YP_005757646.1| hypothetical protein MS7_1205 [Staphylococcus aureus subsp. aureus
11819-97]
gi|418572270|ref|ZP_13136482.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21333]
gi|364522464|gb|AEW65214.1| hypothetical protein MS7_1205 [Staphylococcus aureus subsp. aureus
11819-97]
gi|371984754|gb|EHP01863.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21333]
Length = 372
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|417891960|ref|ZP_12536017.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21200]
gi|341851246|gb|EGS92175.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21200]
Length = 372
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|257090272|ref|ZP_05584633.1| endolysin [Enterococcus faecalis CH188]
gi|256999084|gb|EEU85604.1| endolysin [Enterococcus faecalis CH188]
Length = 413
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ + N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 339 YQTLAALNGLTNPNLIYPGQILKV----------NGSVVSNIYTVQYGDNLSSIAAKLGT 388
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + G+ L
Sbjct: 389 TYQTLAALNGLANPNLIYPGQTL 411
>gi|389637648|ref|XP_003716457.1| intracellular hyphae protein 1 [Magnaporthe oryzae 70-15]
gi|351642276|gb|EHA50138.1| intracellular hyphae protein 1 [Magnaporthe oryzae 70-15]
Length = 285
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDN-----AKVVH--------------YAHV 175
I + NNI++PD I +GQ L IP +VDN A VV+ + V
Sbjct: 181 IAKENNIADPDKIDVGQVLKIPTGLCTQNVDNNSCIKAAVVNPNTDEKGTCLKTGPFTRV 240
Query: 176 VEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+++G SF IA++ G ++ +N D L+ + +++P
Sbjct: 241 IKKGDSFVGIAKELGLQEQAVVDVNPGVDRFNLLPEQTINLP 282
>gi|15924237|ref|NP_371771.1| LytN protein [Staphylococcus aureus subsp. aureus Mu50]
gi|15926830|ref|NP_374363.1| LytN protein [Staphylococcus aureus subsp. aureus N315]
gi|21282859|ref|NP_645947.1| LytN protein [Staphylococcus aureus subsp. aureus MW2]
gi|49486086|ref|YP_043307.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus MSSA476]
gi|148267738|ref|YP_001246681.1| CHAP domain-containing protein [Staphylococcus aureus subsp. aureus
JH9]
gi|150393796|ref|YP_001316471.1| CHAP domain-containing protein [Staphylococcus aureus subsp. aureus
JH1]
gi|156979568|ref|YP_001441827.1| LytN protein [Staphylococcus aureus subsp. aureus Mu3]
gi|255006034|ref|ZP_05144635.2| LytN protein [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|269202863|ref|YP_003282132.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus ED98]
gi|296274804|ref|ZP_06857311.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus MR1]
gi|297208107|ref|ZP_06924538.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300912188|ref|ZP_07129631.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus TCH70]
gi|384864474|ref|YP_005749833.1| hypothetical protein ECTR2_1103 [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|387150390|ref|YP_005741954.1| Putative cell wall hydrolase [Staphylococcus aureus 04-02981]
gi|415691097|ref|ZP_11453336.1| LytN protein [Staphylococcus aureus subsp. aureus CGS03]
gi|417651174|ref|ZP_12300937.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21172]
gi|417802633|ref|ZP_12449690.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21318]
gi|417892246|ref|ZP_12536300.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21201]
gi|417901733|ref|ZP_12545609.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21266]
gi|418321996|ref|ZP_12933335.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus VCU006]
gi|418427382|ref|ZP_13000394.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS2]
gi|418430223|ref|ZP_13003139.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS3a]
gi|418433188|ref|ZP_13005965.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS4]
gi|418436859|ref|ZP_13008661.1| hypothetical protein MQI_00680 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418439731|ref|ZP_13011438.1| hypothetical protein MQK_01262 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418442783|ref|ZP_13014385.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS7]
gi|418445842|ref|ZP_13017318.1| hypothetical protein MQO_00088 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418448786|ref|ZP_13020178.1| hypothetical protein MQQ_00860 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418451610|ref|ZP_13022944.1| hypothetical protein MQS_00088 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454666|ref|ZP_13025928.1| hypothetical protein MQU_00553 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457542|ref|ZP_13028745.1| hypothetical protein MQW_00380 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418569032|ref|ZP_13133372.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21272]
gi|418599660|ref|ZP_13163140.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21343]
gi|418638053|ref|ZP_13200356.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-3]
gi|418654749|ref|ZP_13216645.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-99]
gi|418661526|ref|ZP_13223111.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-122]
gi|418875183|ref|ZP_13429443.1| hypothetical protein SACIGC93_1318 [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418878096|ref|ZP_13432331.1| hypothetical protein SACIG1165_1729 [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418880924|ref|ZP_13435143.1| hypothetical protein SACIG1213_1754 [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418883853|ref|ZP_13438048.1| hypothetical protein SACIG1769_1875 [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886508|ref|ZP_13440656.1| hypothetical protein SACIG1150_1744 [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418894946|ref|ZP_13449041.1| hypothetical protein SACIG1057_2075 [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914345|ref|ZP_13468317.1| hypothetical protein SACIGC340D_1608 [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920324|ref|ZP_13474257.1| hypothetical protein SACIGC348_2106 [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418931317|ref|ZP_13485158.1| hypothetical protein SACIG1750_1727 [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418934149|ref|ZP_13487972.1| hypothetical protein SACIGC128_1676 [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418988068|ref|ZP_13535741.1| hypothetical protein SACIG1835_1319 [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418991109|ref|ZP_13538770.1| hypothetical protein SACIG1096_1769 [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419785018|ref|ZP_14310776.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-M]
gi|424768069|ref|ZP_18195362.1| signal peptide protein, YSIRK family [Staphylococcus aureus subsp.
aureus CM05]
gi|443636949|ref|ZP_21121042.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21236]
gi|448743319|ref|ZP_21725228.1| LytN protein [Staphylococcus aureus KT/Y21]
gi|13701047|dbj|BAB42342.1| LytN protein [Staphylococcus aureus subsp. aureus N315]
gi|14247017|dbj|BAB57409.1| LytN protein [Staphylococcus aureus subsp. aureus Mu50]
gi|21204298|dbj|BAB94995.1| LytN protein [Staphylococcus aureus subsp. aureus MW2]
gi|49244529|emb|CAG42958.1| putative cell wall hydrolase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|147740807|gb|ABQ49105.1| CHAP domain containing protein [Staphylococcus aureus subsp. aureus
JH9]
gi|149946248|gb|ABR52184.1| CHAP domain containing protein [Staphylococcus aureus subsp. aureus
JH1]
gi|156721703|dbj|BAF78120.1| LytN protein [Staphylococcus aureus subsp. aureus Mu3]
gi|262075153|gb|ACY11126.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus ED98]
gi|285816929|gb|ADC37416.1| Putative cell wall hydrolase [Staphylococcus aureus 04-02981]
gi|296887350|gb|EFH26252.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886434|gb|EFK81636.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus TCH70]
gi|312829641|emb|CBX34483.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315131041|gb|EFT87025.1| LytN protein [Staphylococcus aureus subsp. aureus CGS03]
gi|329727358|gb|EGG63814.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21172]
gi|334274269|gb|EGL92591.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21318]
gi|341845572|gb|EGS86774.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21266]
gi|341858213|gb|EGS99014.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21201]
gi|365224611|gb|EHM65876.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus VCU006]
gi|371978217|gb|EHO95467.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21272]
gi|374396318|gb|EHQ67559.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21343]
gi|375014574|gb|EHS08255.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-99]
gi|375023277|gb|EHS16740.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-3]
gi|375038708|gb|EHS31669.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-122]
gi|377694218|gb|EHT18583.1| hypothetical protein SACIG1165_1729 [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377694752|gb|EHT19116.1| hypothetical protein SACIG1057_2075 [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377714599|gb|EHT38798.1| hypothetical protein SACIG1750_1727 [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714940|gb|EHT39138.1| hypothetical protein SACIG1769_1875 [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377719856|gb|EHT44026.1| hypothetical protein SACIG1835_1319 [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377723231|gb|EHT47356.1| hypothetical protein SACIG1096_1769 [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725461|gb|EHT49574.1| hypothetical protein SACIG1150_1744 [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731817|gb|EHT55870.1| hypothetical protein SACIG1213_1754 [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377757847|gb|EHT81735.1| hypothetical protein SACIGC340D_1608 [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377765683|gb|EHT89532.1| hypothetical protein SACIGC348_2106 [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377770243|gb|EHT94005.1| hypothetical protein SACIGC93_1318 [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377770892|gb|EHT94651.1| hypothetical protein SACIGC128_1676 [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383363619|gb|EID40951.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-M]
gi|387718618|gb|EIK06576.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS3a]
gi|387718969|gb|EIK06925.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS2]
gi|387725628|gb|EIK13232.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS4]
gi|387727963|gb|EIK15463.1| hypothetical protein MQI_00680 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387730693|gb|EIK18054.1| hypothetical protein MQK_01262 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387735770|gb|EIK22880.1| hypothetical protein MQO_00088 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387737448|gb|EIK24514.1| YSIRK family Gram-positive signal peptide [Staphylococcus aureus
subsp. aureus VRS7]
gi|387738002|gb|EIK25056.1| hypothetical protein MQQ_00860 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387744491|gb|EIK31255.1| hypothetical protein MQS_00088 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745781|gb|EIK32531.1| hypothetical protein MQU_00553 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387747274|gb|EIK33983.1| hypothetical protein MQW_00380 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402348706|gb|EJU83685.1| signal peptide protein, YSIRK family [Staphylococcus aureus subsp.
aureus CM05]
gi|443406926|gb|ELS65496.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21236]
gi|445563248|gb|ELY19410.1| LytN protein [Staphylococcus aureus KT/Y21]
Length = 372
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|449059230|ref|ZP_21736929.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae hvKP1]
gi|448875041|gb|EMB10069.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae hvKP1]
Length = 149
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 85 AQKPIKVPIHCICSNGTGV---SDKVPV---------YTVKKDDGLDFIARTIFGQLLKY 132
A + K I N TGV SD V V YTVK D L I++ ++G Y
Sbjct: 62 ASQEDKEKILVAVGNVTGVGQVSDGVKVTQSGAESRFYTVKSGDTLSAISKAMYGSANDY 121
Query: 133 QKIVEANN--ISNPDLIQIGQNLTIP 156
Q+I EAN +++PD I GQ L IP
Sbjct: 122 QRIFEANKPMLTHPDKIYPGQVLIIP 147
>gi|54310046|ref|YP_131066.1| membrane-bound lytic murein transglycosylase D [Photobacterium
profundum SS9]
gi|46914485|emb|CAG21264.1| hypothetical membrane-bound lytic murein transglycosylase D
[Photobacterium profundum SS9]
Length = 523
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 98 SNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL 157
S+G+G Y VK D L IAR Q + ++I + NN++ ++IGQ L I
Sbjct: 406 SHGSGYRT---TYQVKSGDNLWTIARN---QKVSIKQITKWNNLNKNSPLKIGQKLNI-- 457
Query: 158 PCSCDDVDNAKVVHYA-HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D + V+ + + +G + +LIAQ+F ++K N I+ L G+ L +
Sbjct: 458 ---WKDQNEGGVIRTVFYEIRQGDNLSLIAQRFNVKVSDVVKWNQINAKKYLKPGQKLKL 514
Query: 217 PLKACNSSI 225
+ S+
Sbjct: 515 YVDVTKVSV 523
>gi|333395326|ref|ZP_08477145.1| hypothetical protein LcorcK3_05903 [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
Length = 929
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA + NNISN +LI +GQ LT+ +
Sbjct: 826 YTVKSGDTLSSIASK---NGTTTASLASKNNISNANLIYVGQVLTLSGSTATSATVTQLS 882
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL 214
++ V+ G S IA GT L NGI + S + G+ +
Sbjct: 883 NSSSYTVKSGDSLYSIAAAHGTTVQALASKNGISNTSLIYVGQKI 927
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 21/125 (16%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQ----KIVEANNISNPDLIQIGQNLTIP------LPC 159
YTV+ D L IA KY + NN+SNP+LI +GQ L +
Sbjct: 576 YTVQSGDTLSAIAN-------KYATTAANLASKNNLSNPNLIYVGQVLNVATTTSSSNTG 628
Query: 160 SCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
S V N K + V+ G + + IA+ + T TL N + + + + G+ L V
Sbjct: 629 STTTVGNTKY----YTVQSGDTLSAIARTYNTTAATLASKNNLANANLIYVGQKLIVSSS 684
Query: 220 ACNSS 224
A S+
Sbjct: 685 AATST 689
>gi|330000224|ref|ZP_08303652.1| LysM domain protein [Klebsiella sp. MS 92-3]
gi|386034852|ref|YP_005954765.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae KCTC
2242]
gi|424830651|ref|ZP_18255379.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|328538047|gb|EGF64217.1| LysM domain protein [Klebsiella sp. MS 92-3]
gi|339761980|gb|AEJ98200.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae KCTC
2242]
gi|414708080|emb|CCN29784.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 149
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 85 AQKPIKVPIHCICSNGTGV---SDKVPV---------YTVKKDDGLDFIARTIFGQLLKY 132
A + K I N TGV SD V V YTVK D L I++ ++G Y
Sbjct: 62 ASQEDKEKILVAVGNVTGVGQVSDGVKVTQSGAESRFYTVKSGDTLSAISKAMYGSANDY 121
Query: 133 QKIVEANN--ISNPDLIQIGQNLTIP 156
Q+I EAN +++PD I GQ L IP
Sbjct: 122 QRIFEANKPMLTHPDKIYPGQVLIIP 147
>gi|448741764|ref|ZP_21723721.1| LytN protein [Staphylococcus aureus KT/314250]
gi|445547402|gb|ELY15671.1| LytN protein [Staphylococcus aureus KT/314250]
Length = 372
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|257795697|ref|ZP_05644676.1| cell wall hydrolase lytN [Staphylococcus aureus A9781]
gi|258415921|ref|ZP_05682191.1| cell wall hydrolase lytN [Staphylococcus aureus A9763]
gi|258421683|ref|ZP_05684607.1| cell wall hydrolase lytN [Staphylococcus aureus A9719]
gi|258454803|ref|ZP_05702767.1| LytN protein [Staphylococcus aureus A5937]
gi|282892735|ref|ZP_06300970.1| cell wall hydrolase lytN [Staphylococcus aureus A8117]
gi|282927589|ref|ZP_06335205.1| cell wall hydrolase lytN [Staphylococcus aureus A10102]
gi|295406182|ref|ZP_06815989.1| cell wall hydrolase lytN [Staphylococcus aureus A8819]
gi|297244410|ref|ZP_06928293.1| cell wall hydrolase lytN [Staphylococcus aureus A8796]
gi|90101400|sp|Q99UM3.2|LYTN_STAAM RecName: Full=Probable cell wall hydrolase LytN; Flags: Precursor
gi|90101401|sp|Q7A5Y8.2|LYTN_STAAN RecName: Full=Probable cell wall hydrolase LytN; Flags: Precursor
gi|4574237|gb|AAD23962.1|AF106851_1 LytN [Staphylococcus aureus]
gi|257789669|gb|EEV28009.1| cell wall hydrolase lytN [Staphylococcus aureus A9781]
gi|257839257|gb|EEV63731.1| cell wall hydrolase lytN [Staphylococcus aureus A9763]
gi|257842369|gb|EEV66794.1| cell wall hydrolase lytN [Staphylococcus aureus A9719]
gi|257863186|gb|EEV85950.1| LytN protein [Staphylococcus aureus A5937]
gi|282590592|gb|EFB95669.1| cell wall hydrolase lytN [Staphylococcus aureus A10102]
gi|282764732|gb|EFC04857.1| cell wall hydrolase lytN [Staphylococcus aureus A8117]
gi|294968770|gb|EFG44792.1| cell wall hydrolase lytN [Staphylococcus aureus A8819]
gi|297178440|gb|EFH37686.1| cell wall hydrolase lytN [Staphylococcus aureus A8796]
gi|408423439|emb|CCJ10850.1| Probable cell wall hydrolase lytN [Staphylococcus aureus subsp.
aureus ST228]
gi|408425429|emb|CCJ12816.1| Probable cell wall hydrolase lytN [Staphylococcus aureus subsp.
aureus ST228]
gi|408427417|emb|CCJ14780.1| Probable cell wall hydrolase lytN [Staphylococcus aureus subsp.
aureus ST228]
gi|408429404|emb|CCJ26569.1| Probable cell wall hydrolase lytN [Staphylococcus aureus subsp.
aureus ST228]
gi|408431392|emb|CCJ18707.1| Probable cell wall hydrolase lytN [Staphylococcus aureus subsp.
aureus ST228]
gi|408433386|emb|CCJ20671.1| Probable cell wall hydrolase lytN [Staphylococcus aureus subsp.
aureus ST228]
gi|408435377|emb|CCJ22637.1| Probable cell wall hydrolase lytN [Staphylococcus aureus subsp.
aureus ST228]
gi|408437362|emb|CCJ24605.1| Probable cell wall hydrolase lytN [Staphylococcus aureus subsp.
aureus ST228]
Length = 383
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>gi|3767593|dbj|BAA33856.1| LytN [Staphylococcus aureus]
Length = 383
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIPNTNNIANPNLIFIGQKLKVPM 221
>gi|258434839|ref|ZP_05688913.1| LytN protein [Staphylococcus aureus A9299]
gi|257849200|gb|EEV73182.1| LytN protein [Staphylococcus aureus A9299]
Length = 376
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 166 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 214
>gi|253731866|ref|ZP_04866031.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253724276|gb|EES93005.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
Length = 372
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|448376338|ref|ZP_21559547.1| peptidoglycan-binding lysin domain-containing protein [Halovivax
asiaticus JCM 14624]
gi|445657263|gb|ELZ10092.1| peptidoglycan-binding lysin domain-containing protein [Halovivax
asiaticus JCM 14624]
Length = 220
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 104 SDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
+DK V+TV + D L IA +G ++ I E N+I NP I G+ L +P
Sbjct: 166 TDKTKVWTVTEGDTLWLIASEEYGDPSHWRTIAEQNDIENPRAIAAGERLELP 218
>gi|384550004|ref|YP_005739256.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus JKD6159]
gi|416844678|ref|ZP_11905364.1| cell wall hydrolase [Staphylococcus aureus O46]
gi|417896083|ref|ZP_12540050.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21235]
gi|302332853|gb|ADL23046.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus JKD6159]
gi|323443893|gb|EGB01504.1| cell wall hydrolase [Staphylococcus aureus O46]
gi|341840984|gb|EGS82456.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21235]
Length = 372
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|312109167|ref|YP_003987483.1| glycoside hydrolase family protein [Geobacillus sp. Y4.1MC1]
gi|311214268|gb|ADP72872.1| glycoside hydrolase family 18 [Geobacillus sp. Y4.1MC1]
Length = 428
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
++I++AN++ NPD + +GQ + IP +V + V G S I+++F
Sbjct: 24 EEIIQANDLPNPDNLVVGQAIVIP------------IVGRFYWVLRGDSLWSISRRFSIP 71
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYL 234
L ++N I DS L G+ L +P + + F+ Y+
Sbjct: 72 MQQLAQINRISLDSPLQVGQRLYIPPRTKRRA----EFNGYI 109
>gi|205371948|ref|ZP_03224767.1| spore peptidoglycan hydrolase (N-acetylglucosaminidase) [Bacillus
coahuilensis m4-4]
Length = 428
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 16/106 (15%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
IVEAN + NP+ + +GQ L IP +V + V+EG S I+QK G
Sbjct: 26 IVEANQLPNPNNLVVGQALVIP------------IVGRYYYVQEGDSLWKISQKVGVPYK 73
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGT 240
+ ++N I L G L +P + +S+ F+ Y+ G+
Sbjct: 74 EIARVNSISMTETLQVGARLYLPPISKSSA----EFNAYVEPLGGS 115
>gi|90101411|sp|Q6G9W6.2|LYTN_STAAS RecName: Full=Probable cell wall hydrolase LytN; Flags: Precursor
gi|90101412|sp|Q7A123.2|LYTN_STAAW RecName: Full=Probable cell wall hydrolase LytN; Flags: Precursor
Length = 383
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>gi|418282831|ref|ZP_12895588.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21202]
gi|365168428|gb|EHM59766.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21202]
Length = 372
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|358011410|ref|ZP_09143220.1| LysM domain/BON superfamily protein [Acinetobacter sp. P8-3-8]
Length = 157
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L IA+ ++G KY KI EAN + +PD I GQ L IP
Sbjct: 108 YTVKSGDNLSKIAKEVYGDANKYPKIFEANKPMLKDPDEIFPGQVLRIP 156
>gi|258444585|ref|ZP_05692914.1| LytN protein [Staphylococcus aureus A8115]
gi|258447582|ref|ZP_05695726.1| LytN, cell wall hydrolase [Staphylococcus aureus A6300]
gi|258449424|ref|ZP_05697527.1| LytN, cell wall hydrolase [Staphylococcus aureus A6224]
gi|257850078|gb|EEV74031.1| LytN protein [Staphylococcus aureus A8115]
gi|257853773|gb|EEV76732.1| LytN, cell wall hydrolase [Staphylococcus aureus A6300]
gi|257857412|gb|EEV80310.1| LytN, cell wall hydrolase [Staphylococcus aureus A6224]
Length = 388
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 178 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 226
>gi|282910819|ref|ZP_06318622.1| LytN protein [Staphylococcus aureus subsp. aureus WBG10049]
gi|384867870|ref|YP_005748066.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus TCH60]
gi|282325424|gb|EFB55733.1| LytN protein [Staphylococcus aureus subsp. aureus WBG10049]
gi|312438375|gb|ADQ77446.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus TCH60]
Length = 372
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|90414051|ref|ZP_01222034.1| hypothetical membrane-bound lytic murein transglycosylase D
[Photobacterium profundum 3TCK]
gi|90324846|gb|EAS41374.1| hypothetical membrane-bound lytic murein transglycosylase D
[Photobacterium profundum 3TCK]
Length = 523
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 14/202 (6%)
Query: 26 QDFKCSAQTAARCQALVGYLPPNKTTISEIQSL--FTVKNLRSILGANNFPPGTPRNFSV 83
Q K L G +KT++ EIQ T N+R +G + P +N +
Sbjct: 334 QGMKVVRYKVKSGDTLGGLAAKHKTSVKEIQRANKMTTTNIR--VGKHLLIPVAMKNGAE 391
Query: 84 PAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISN 143
S+G+G Y VK D L IAR Q + +I + NN++
Sbjct: 392 FTSTGQMQQTRTQQSHGSGYRT---TYKVKSGDSLWTIARN---QKVSIAQITKWNNLNK 445
Query: 144 PDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIH 203
++IGQ L I + V + V Y + +G + +LIAQ+F ++K N I
Sbjct: 446 NSPLKIGQKLNIWKAQNEGGV--IRTVFYE--IRQGDNLSLIAQRFHVKVSDVVKWNQIS 501
Query: 204 DDSKLIAGEPLDVPLKACNSSI 225
L G+ L + + S+
Sbjct: 502 SKKYLKPGQKLKLYVDVTKVSV 523
>gi|414154189|ref|ZP_11410509.1| Peptidase M23B [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411454374|emb|CCO08413.1| Peptidase M23B [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 303
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 81 FSVPAQKPIKVPIHCICSNGTGVSDKVPV-YTVKKDDGLDFIARTIFGQLLKYQKIVEAN 139
+++PA +P+ ++ +P+ Y V+ D L IA L ++ AN
Sbjct: 41 YTLPAARPV-----AAVKQPAALAGSLPMEYRVRPGDTLWSIAGRCG---LTVAELATAN 92
Query: 140 NISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKL 199
NI+ +++ +G+ LTIP C H+V G + + IA ++G D L+K
Sbjct: 93 NINEAEILAVGRTLTIPGREVC-----------YHLVAGGETLSHIAGQYGISLDELVKA 141
Query: 200 NGIHDDSKLIAGEPLDVPL 218
N + + + G+ L +P+
Sbjct: 142 NHLANPHLIRQGDRLIIPV 160
>gi|389873438|ref|YP_006380857.1| LysM domain/BON superfamily protein [Advenella kashmirensis WT001]
gi|388538687|gb|AFK63875.1| LysM domain/BON superfamily protein [Advenella kashmirensis WT001]
Length = 144
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I++ +G +YQKI EAN +S+PD I GQ L IP
Sbjct: 95 YTVKSGDTLSKISKDQYGDANQYQKIFEANRPMLSHPDKIYPGQVLRIP 143
>gi|295427734|ref|ZP_06820366.1| cell wall hydrolase lytN [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|295128092|gb|EFG57726.1| cell wall hydrolase lytN [Staphylococcus aureus subsp. aureus
EMRSA16]
Length = 428
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVE----ANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 218 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 266
>gi|90408486|ref|ZP_01216645.1| putative N-acetylmuramoyl-L-alanine amidase [Psychromonas sp.
CNPT3]
gi|90310418|gb|EAS38544.1| putative N-acetylmuramoyl-L-alanine amidase [Psychromonas sp.
CNPT3]
Length = 914
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 110 YTVKKDDGLDFIAR---TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVD 165
Y VKK D L IAR L ++ K+ + + IGQ L + P + D
Sbjct: 600 YKVKKGDSLSEIARDQQISLADLKRWNKL-------RSNSVNIGQKLYVRAPSNVLSKAD 652
Query: 166 NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
K H+V+ G S ++IA +G LM+ N + SKL G+ L +
Sbjct: 653 KTKKTRL-HIVKRGESLSVIAHSYGFISADLMRFNHL-SSSKLAVGQKLKL 701
>gi|417552276|ref|ZP_12203346.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-81]
gi|417561004|ref|ZP_12211883.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC137]
gi|421198306|ref|ZP_15655472.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC109]
gi|421454432|ref|ZP_15903779.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-123]
gi|421634713|ref|ZP_16075327.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-13]
gi|421805527|ref|ZP_16241409.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-A-694]
gi|395523586|gb|EJG11675.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC137]
gi|395565993|gb|EJG27639.1| transglycosylase SLT domain protein [Acinetobacter baumannii
OIFC109]
gi|400212222|gb|EJO43181.1| transglycosylase SLT domain protein [Acinetobacter baumannii
IS-123]
gi|400392535|gb|EJP59581.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-81]
gi|408704246|gb|EKL49619.1| transglycosylase SLT domain protein [Acinetobacter baumannii
Naval-13]
gi|410408602|gb|EKP60560.1| transglycosylase SLT domain protein [Acinetobacter baumannii
WC-A-694]
Length = 1071
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 12/115 (10%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC 161
G S K Y V++ D L IA + ++ E NN+ +Q+GQ L +P
Sbjct: 779 GPSYKTESYKVQRGDTLSSIATK---SKISLAELAELNNLKANSHVQLGQTLKVPAGALV 835
Query: 162 DDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
D +VV+ G S IA K+ L LNG+ + L AG+ L +
Sbjct: 836 PD---------QYVVQSGDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKL 881
>gi|365873380|ref|ZP_09412913.1| LOW QUALITY PROTEIN: metalloendopeptidase-like membrane protein
[Thermanaerovibrio velox DSM 12556]
gi|363983467|gb|EHM09674.1| LOW QUALITY PROTEIN: metalloendopeptidase-like membrane protein
[Thermanaerovibrio velox DSM 12556]
Length = 432
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 41/162 (25%)
Query: 111 TVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVV 170
TV++ + L IA+ LK + +V AN+I +PD IQ GQ L +PL D V +
Sbjct: 116 TVQEGESLSVIAQR---HGLKVKDLVAANDIKDPDSIQEGQVLFVPL--GADKVLET-LA 169
Query: 171 HYAHV--------------------VEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
H H+ V+EG S IA FG D +TL N +LI
Sbjct: 170 HVKHLRRMEEEAEKNPPKVEVRYYTVKEGDSLWSIANSFGLDVNTLFGAN--RSAGELIR 227
Query: 211 -GEPLDVP--------LKACNSSIK-ADSFDNY---LRVANG 239
G + +P ++ ++ + AD +D Y +R ANG
Sbjct: 228 PGSSVRIPNQDGIFVKVRRGDTVARLADKYDVYPEAIRSANG 269
>gi|333397280|ref|ZP_08479093.1| hypothetical protein LgelK3_01808 [Leuconostoc gelidum KCTC 3527]
gi|406600554|ref|YP_006745900.1| hypothetical protein C269_07885 [Leuconostoc gelidum JB7]
gi|406372089|gb|AFS41014.1| hypothetical protein C269_07885 [Leuconostoc gelidum JB7]
Length = 382
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
+ + +ANNI++ +LI GQ LT+ P S + + V+ G + + +AQ+ G +
Sbjct: 51 EDLAKANNITDQNLIIAGQQLTVSTPASSAVSADGTT----YTVQTGDTLSKVAQQTGIN 106
Query: 193 RDTLMKLNGIHDDSKLIAGEPL 214
+TL +N + + L+AG+ L
Sbjct: 107 IETLSSVNDLSNHDFLLAGQVL 128
>gi|336233562|ref|YP_004586178.1| glycoside hydrolase family protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|423718288|ref|ZP_17692470.1| glycoside hydrolase, family 18 [Geobacillus thermoglucosidans
TNO-09.020]
gi|335360417|gb|AEH46097.1| glycoside hydrolase family 18 [Geobacillus thermoglucosidasius
C56-YS93]
gi|383365285|gb|EID42583.1| glycoside hydrolase, family 18 [Geobacillus thermoglucosidans
TNO-09.020]
Length = 428
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 133 QKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTD 192
++I++AN++ NPD + +GQ + IP +V + V G S I+++F
Sbjct: 24 EEIIQANDLPNPDNLVVGQAIVIP------------IVGRFYWVLRGDSLWSISRRFSIP 71
Query: 193 RDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYL 234
L ++N I DS L G+ L +P + + F+ Y+
Sbjct: 72 MQQLAQINRISLDSPLQVGQRLYIPPRTKRRA----EFNGYI 109
>gi|256619466|ref|ZP_05476312.1| phage lysin [Enterococcus faecalis ATCC 4200]
gi|256598993|gb|EEU18169.1| phage lysin [Enterococcus faecalis ATCC 4200]
Length = 413
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ + N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 339 YQTLAALNGLTNPNLIYPGQILKV----------NGSVVSNIYTVQYGDNLSSIAAKLGT 388
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + G+ L
Sbjct: 389 TYQTLAALNGLANPNLIYPGQTL 411
>gi|253733515|ref|ZP_04867680.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus TCH130]
gi|253728569|gb|EES97298.1| C51 family D-Ala-D-Gly carboxypeptidase [Staphylococcus aureus
subsp. aureus TCH130]
Length = 372
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|383455522|ref|YP_005369511.1| LysM domain-containing protein [Corallococcus coralloides DSM 2259]
gi|380734946|gb|AFE10948.1| LysM domain-containing protein [Corallococcus coralloides DSM 2259]
Length = 131
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
++TVK D L +A+ I+G + Y KI EAN + +PD I++GQ L +P
Sbjct: 74 LHTVKSGDTLSKLAKDIYGDMKLYTKIFEANKDQLKDPDHIKVGQVLKLP 123
>gi|386830782|ref|YP_006237436.1| putative cell wall hydrolase [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|417797880|ref|ZP_12445066.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21310]
gi|418655693|ref|ZP_13217536.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-105]
gi|334277002|gb|EGL95241.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21310]
gi|375035901|gb|EHS28998.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus IS-105]
gi|385196174|emb|CCG15795.1| putative cell wall hydrolase [Staphylococcus aureus subsp. aureus
HO 5096 0412]
Length = 372
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|312902770|ref|ZP_07761974.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0635]
gi|310633824|gb|EFQ17107.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0635]
Length = 413
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ + N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 339 YQTLAALNGLTNPNLIYPGQILKV----------NGSVVSNIYTVQYGDNLSSIAAKLGT 388
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + G+ L
Sbjct: 389 TYQTLATLNGLANPNLIYPGQTL 411
>gi|197335626|ref|YP_002156768.1| membrane-bound lytic murein transglycosylase D [Vibrio fischeri
MJ11]
gi|197317116|gb|ACH66563.1| membrane-bound lytic murein transglycosylase D [Vibrio fischeri
MJ11]
Length = 517
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA-- 167
+ VK + L IAR + Y+ + + N ++ D +++GQNL I ++ D A
Sbjct: 409 HKVKDGESLWSIARD---NSISYRDLAKWNGMAPKDSLRVGQNLVI----WKNNSDGAII 461
Query: 168 KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ VHY + +G + + IAQKF +MK N I S + G+ L +
Sbjct: 462 RTVHYQ--IRQGDNLSSIAQKFSVAVTDIMKWNNIERGSYIKPGQKLKL 508
>gi|90101402|sp|Q6GHI8.2|LYTN_STAAR RecName: Full=Probable cell wall hydrolase LytN; Flags: Precursor
Length = 383
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>gi|49483410|ref|YP_040634.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus MRSA252]
gi|282905565|ref|ZP_06313420.1| cell wall hydrolase lytN [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908540|ref|ZP_06316370.1| LytN protein [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282918946|ref|ZP_06326681.1| cell wall hydrolase lytN [Staphylococcus aureus subsp. aureus C427]
gi|283957990|ref|ZP_06375441.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|297591308|ref|ZP_06949946.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus MN8]
gi|417887045|ref|ZP_12531184.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21195]
gi|418566676|ref|ZP_13131049.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21264]
gi|418582081|ref|ZP_13146159.1| hypothetical protein SACIG1605_1977 [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418597683|ref|ZP_13161205.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21342]
gi|418891880|ref|ZP_13445995.1| hypothetical protein SACIG1176_1961 [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418897784|ref|ZP_13451854.1| hypothetical protein SACIGC341D_1985 [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418900654|ref|ZP_13454711.1| hypothetical protein SACIG1214_1904 [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418908958|ref|ZP_13462961.1| hypothetical protein SACIG149_1835 [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917042|ref|ZP_13471001.1| hypothetical protein SACIG1267_1759 [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418922829|ref|ZP_13476746.1| hypothetical protein SACIG1233_1814 [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418982160|ref|ZP_13529868.1| hypothetical protein SACIG1242_1208 [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418985828|ref|ZP_13533514.1| hypothetical protein SACIG1500_1901 [Staphylococcus aureus subsp.
aureus CIG1500]
gi|49241539|emb|CAG40225.1| putative cell wall hydrolase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282316756|gb|EFB47130.1| cell wall hydrolase lytN [Staphylococcus aureus subsp. aureus C427]
gi|282327602|gb|EFB57885.1| LytN protein [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330857|gb|EFB60371.1| cell wall hydrolase lytN [Staphylococcus aureus subsp. aureus
Btn1260]
gi|283790139|gb|EFC28956.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|297576194|gb|EFH94910.1| cell wall hydrolase [Staphylococcus aureus subsp. aureus MN8]
gi|341858467|gb|EGS99257.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21195]
gi|371969946|gb|EHO87384.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21264]
gi|374393745|gb|EHQ65049.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21342]
gi|377703122|gb|EHT27438.1| hypothetical protein SACIG1214_1904 [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704441|gb|EHT28750.1| hypothetical protein SACIG1242_1208 [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377705646|gb|EHT29950.1| hypothetical protein SACIG1500_1901 [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377710491|gb|EHT34729.1| hypothetical protein SACIG1605_1977 [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377731212|gb|EHT55269.1| hypothetical protein SACIG1176_1961 [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377736152|gb|EHT60182.1| hypothetical protein SACIG1233_1814 [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377750216|gb|EHT74154.1| hypothetical protein SACIG1267_1759 [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377753996|gb|EHT77906.1| hypothetical protein SACIG149_1835 [Staphylococcus aureus subsp.
aureus CIG149]
gi|377760819|gb|EHT84695.1| hypothetical protein SACIGC341D_1985 [Staphylococcus aureus subsp.
aureus CIGC341D]
Length = 372
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|408378814|ref|ZP_11176410.1| 5prime-nucleotidase [Agrobacterium albertimagni AOL15]
gi|407747264|gb|EKF58784.1| 5prime-nucleotidase [Agrobacterium albertimagni AOL15]
Length = 649
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VY V D L IA+ +G + + KI EAN + NP++I IG+ L +P
Sbjct: 600 VYKVVAGDSLWKIAQATYGDGMMWSKIAEANALRNPNVISIGRELQLP 647
>gi|418603141|ref|ZP_13166532.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21345]
gi|374393870|gb|EHQ65173.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
aureus subsp. aureus 21345]
Length = 372
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 162 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 210
>gi|357635106|ref|ZP_09132984.1| Peptidoglycan-binding lysin domain protein [Desulfovibrio sp.
FW1012B]
gi|357583660|gb|EHJ48993.1| Peptidoglycan-binding lysin domain protein [Desulfovibrio sp.
FW1012B]
Length = 735
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 75 PGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQK 134
PG+ R + A P P + S G G+SD +Y V K D L +++ FG + +
Sbjct: 506 PGSARAEAGRAAPP--APRQDVRS-GRGLSDAA-LYPVAKGDTLWALSKR-FG--VDFAA 558
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
+V AN +P +Q+GQ +TIP + + V +A+ + + V G + IA++F +
Sbjct: 559 LVSANGELDPARLQVGQLVTIP---AGESVASAESLVFP--VAAGDTLWSIARRFDVSIE 613
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
L+ N D +L G+ L VP
Sbjct: 614 ALVAANPGVDPLRLHEGQALRVP 636
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
V++V D +AR + + E+N P + IGQ L IP+ A
Sbjct: 399 VHSVADGDNFWSVARQ---HDVTVAALTESNPGVEPTRLHIGQPLVIPVAGQAAAKATAV 455
Query: 169 VVHYA--HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIK 226
+VV +G +F IA++FG D L + N D KL G+ L +P A + +
Sbjct: 456 ARADGDRYVVADGDNFWSIARRFGIDAAELKRANAAVDPQKLQPGQLLALPGSARAEAGR 515
Query: 227 A 227
A
Sbjct: 516 A 516
>gi|417898391|ref|ZP_12542311.1| CHAP domain protein [Staphylococcus aureus subsp. aureus 21259]
gi|341848424|gb|EGS89587.1| CHAP domain protein [Staphylococcus aureus subsp. aureus 21259]
Length = 341
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 131 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 179
>gi|335031523|ref|ZP_08524953.1| Transglycosylase-like domain protein [Streptococcus anginosus SK52
= DSM 20563]
gi|333769316|gb|EGL46450.1| Transglycosylase-like domain protein [Streptococcus anginosus SK52
= DSM 20563]
Length = 206
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
TG YTVK D L IA+ + +KIVE N I NPDLI++GQ L +
Sbjct: 22 TGAIASAESYTVKSGDTLSEIAKE---KNTSVEKIVELNRIENPDLIKVGQILEL 73
>gi|238894760|ref|YP_002919494.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402780758|ref|YP_006636304.1| hypothetical protein A79E_2509 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|425081540|ref|ZP_18484637.1| hypothetical protein HMPREF1306_02288 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428931183|ref|ZP_19004783.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae JHCK1]
gi|238547076|dbj|BAH63427.1| putative peptidoglycan-binding protein [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|402541661|gb|AFQ65810.1| hypothetical protein A79E_2509 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405602970|gb|EKB76093.1| hypothetical protein HMPREF1306_02288 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|426308347|gb|EKV70413.1| LysM domain/BON superfamily protein [Klebsiella pneumoniae JHCK1]
Length = 149
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 85 AQKPIKVPIHCICSNGTGV---SDKVPV---------YTVKKDDGLDFIARTIFGQLLKY 132
A + K I N TGV SD V V YTVK D L I++ ++G Y
Sbjct: 62 ASQEDKEKILVAVGNVTGVGQVSDGVKVTQSGAESRFYTVKSGDTLSAISKAMYGSANDY 121
Query: 133 QKIVEANN--ISNPDLIQIGQNLTIP 156
Q+I EAN +++PD I GQ L IP
Sbjct: 122 QRIFEANKPMLTHPDKIYPGQVLIIP 147
>gi|83590119|ref|YP_430128.1| peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
gi|83573033|gb|ABC19585.1| Peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
Length = 307
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAK 168
YTV+ D + FIAR FG + ++ AN + +P+LI GQ L IP
Sbjct: 26 YTVQSGDTMYFIARR-FG--ISLNDLIAANPQVRDPNLIYPGQVLCIPK--MAPVPPGPC 80
Query: 169 VVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNG-IHDDSKLIAGEPLDVPLKA 220
+ + V+ G + IAQKF D L+ N I D + + G+ L +P A
Sbjct: 81 PGGFLYTVQPGDTMYTIAQKFNVSLDALIAANPQIKDPNLIYPGQVLCIPASA 133
>gi|406988433|gb|EKE08435.1| hypothetical protein ACD_17C00167G0004 [uncultured bacterium]
Length = 218
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 48 NKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKV 107
N+TT + +Q V L S + N R F A +K I + G+ +
Sbjct: 123 NETTAALLQFRNRVDELESEIHLQN------RRFDEVAN--LKTNIETLAK---GLYGQY 171
Query: 108 PVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLP 158
Y VK D LD IAR + +KI E NN+ N DLI IGQ L IP+P
Sbjct: 172 KTYKVKAGDSLDKIARIHQTSI---EKIKELNNL-NHDLIVIGQELKIPVP 218
>gi|406919948|gb|EKD58104.1| hypothetical protein ACD_57C00031G0012 [uncultured bacterium]
Length = 186
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 81 FSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANN 140
FS + I S ++ + Y V D L I+ +G + + + NN
Sbjct: 43 FSRRGGQQIDTGEQTTQSKEQAMAQEKQEYKVVAGDSLSKISEKYYGSMDLWPVLARENN 102
Query: 141 ISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKF---GTDRDTLM 197
I+NP++I + L IP ++ V ++ V EG +F IA+K G+ L
Sbjct: 103 IANPNIIFVDSTLNIPAKSDAENAQGEMAVT-SYQVTEGETFFKIAEKVYGNGSRWTVLH 161
Query: 198 KLNGIHDDSKLIAGEPL 214
+ NG +L G PL
Sbjct: 162 QANG---GRRLPNGNPL 175
>gi|372274779|ref|ZP_09510815.1| LysM domain/BON superfamily protein [Pantoea sp. SL1_M5]
Length = 85
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L IA+ + +Y KI EAN +S+PD I GQ LTIP
Sbjct: 36 YTVKSGDTLSAIAKQFYNDASQYMKIFEANKNLLSSPDKIAPGQVLTIP 84
>gi|328950744|ref|YP_004368079.1| peptidase M23 [Marinithermus hydrothermalis DSM 14884]
gi|328451068|gb|AEB11969.1| Peptidase M23 [Marinithermus hydrothermalis DSM 14884]
Length = 387
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 76 GTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKI 135
G ++ P Q +++PI V V VYTV+ D L+ IA+ FG L ++
Sbjct: 79 GLKKDLLYPGQV-VRIPIEVKEEREARVPPGVRVYTVRPGDTLEAIAKR-FG--LSILEL 134
Query: 136 VEAN-NISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
V AN + + D + G L IP + +V A EG S +A ++G +
Sbjct: 135 VSANPTLPSLDRVVAGTRLLIP------TEEKGVLVPLA----EGESLPTLAARYGRPVE 184
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
L ++NGI +L G+ + +P
Sbjct: 185 ELARVNGIQSPLELKPGDWVLIP 207
>gi|389843714|ref|YP_006345794.1| metalloendopeptidase-like membrane protein [Mesotoga prima
MesG1.Ag.4.2]
gi|387858460|gb|AFK06551.1| metalloendopeptidase-like membrane protein [Mesotoga prima
MesG1.Ag.4.2]
Length = 282
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
Y V+ D + I+R + + I++ N++ NP+ I+ G L IP P
Sbjct: 28 YVVRAGDSIHTISRDL---DVSISTIIDFNSLKNPNSIKAGDTLRIPQPDGL-------- 76
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACN 222
+ V+ G +F IA+ F + D L+ N + DS + G+ + +P+ N
Sbjct: 77 ---IYEVQSGDTFDYIAKLFFSPVDELIAANNLKPDSVINPGQRIFIPMSLVN 126
>gi|114199286|gb|ABI54253.1| putative endolysin [Lactococcus phage P335]
Length = 431
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
+Q++ N++SNP++I IGQ + S + V+ G + + IA + GT
Sbjct: 354 WQELARQNSLSNPNMIYIGQVIRFTGGQSG-------ATARTYTVQSGDNLSSIASRLGT 406
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLD 215
+L+ +NGI + + + AG+ L+
Sbjct: 407 TVQSLVSMNGISNSNLIYAGQTLN 430
>gi|410460790|ref|ZP_11314461.1| spore germination protein [Bacillus azotoformans LMG 9581]
gi|409926580|gb|EKN63740.1| spore germination protein [Bacillus azotoformans LMG 9581]
Length = 471
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
IVE N + P+ + IGQ+L IP+ + HV++ G + IAQK+G +
Sbjct: 26 IVEINGLQFPNQLVIGQSLIIPVSGTT------------HVIKSGETLWSIAQKYGVTTN 73
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
++++ N + + + L G L +P
Sbjct: 74 SIIQANQLTNPNLLYPGTKLIIP 96
>gi|423686719|ref|ZP_17661527.1| membrane-bound lytic murein transglycosylase D [Vibrio fischeri
SR5]
gi|371494787|gb|EHN70385.1| membrane-bound lytic murein transglycosylase D [Vibrio fischeri
SR5]
Length = 517
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
+ VK + L IAR + Y+ + + N ++ D +++GQNL I S + +
Sbjct: 409 HKVKDGESLWSIARD---NSISYRDLAKWNGMAPKDSLRVGQNLVIWKNSSDGAI--IRT 463
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
VHY + +G + + IAQKF +MK N I S + G+ L +
Sbjct: 464 VHYQ--IRQGDNLSSIAQKFSVAVTDIMKWNNIERGSYIKPGQKLKL 508
>gi|354557554|ref|ZP_08976812.1| Peptidoglycan-binding lysin domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353550348|gb|EHC19785.1| Peptidoglycan-binding lysin domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 137
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VY VKK D + IA+ +G ++ I+ ANN+SNPDLI GQ L IP
Sbjct: 91 VYVVKKGDSVYKIAKR-YGTTMR--AIILANNLSNPDLIYPGQVLYIP 135
>gi|169594772|ref|XP_001790810.1| hypothetical protein SNOG_00115 [Phaeosphaeria nodorum SN15]
gi|111070490|gb|EAT91610.1| hypothetical protein SNOG_00115 [Phaeosphaeria nodorum SN15]
Length = 366
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
G S+ YTV++ D L IA ++ + NNISNPD+I GQNL +P
Sbjct: 257 GQSNGASTYTVQQGDTLRAIAARFA--HCSFEDLARHNNISNPDMIYPGQNLQVP 309
>gi|375260922|ref|YP_005020092.1| LysM domain/BON superfamily protein [Klebsiella oxytoca KCTC 1686]
gi|397658007|ref|YP_006498709.1| hypothetical protein A225_2998 [Klebsiella oxytoca E718]
gi|402840711|ref|ZP_10889172.1| LysM domain protein [Klebsiella sp. OBRC7]
gi|365910400|gb|AEX05853.1| LysM domain/BON superfamily protein [Klebsiella oxytoca KCTC 1686]
gi|394346372|gb|AFN32493.1| hypothetical protein A225_2998 [Klebsiella oxytoca E718]
gi|402285025|gb|EJU33516.1| LysM domain protein [Klebsiella sp. OBRC7]
Length = 149
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I++ ++G +YQ+I EAN +++PD I GQ L IP
Sbjct: 99 YTVKSGDTLSAISKAMYGSANEYQRIFEANKPMLTHPDKIYPGQVLIIP 147
>gi|326390436|ref|ZP_08211994.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus JW 200]
gi|325993554|gb|EGD51988.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
ethanolicus JW 200]
Length = 327
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA+ + Y+ I+ NN++ P I GQ L IP
Sbjct: 57 YTVQPGDTLYLIAQKFN---VPYEAIIYTNNLTYPYTIYPGQKLFIPGAKIIAPQPPLPS 113
Query: 170 VHYA-------HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
A + V+ G + IAQKFG + L+K N + + + + G+ L +P
Sbjct: 114 PPPAQKPCPTYYTVQPGDTLWTIAQKFGVSLEELIKANYLINPNMIYPGQILIIP 168
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I+ NNI NP LI GQ L IP+ S + V+ G + LIAQKF +
Sbjct: 30 IITRNNIINPSLIYPGQRLIIPVQGSY------------YTVQPGDTLYLIAQKFNVPYE 77
Query: 195 TLMKLNGIHDDSKLIAGEPLDVP 217
++ N + + G+ L +P
Sbjct: 78 AIIYTNNLTYPYTIYPGQKLFIP 100
>gi|258423912|ref|ZP_05686797.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257845941|gb|EEV69970.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 388
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 178 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 226
>gi|182414658|ref|YP_001819724.1| peptidoglycan-binding LysM [Opitutus terrae PB90-1]
gi|177841872|gb|ACB76124.1| Peptidoglycan-binding LysM [Opitutus terrae PB90-1]
Length = 187
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV++ D L IAR K Q IV AN IS+P I +GQ L IP
Sbjct: 141 YTVQRGDTLAVIARKTGA---KVQDIVNANKISDPSRINVGQTLFIP 184
>gi|356541475|ref|XP_003539201.1| PREDICTED: proline-rich receptor-like protein kinase PERK8-like
[Glycine max]
Length = 640
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 19 LSTLSTAQDFKCSAQTAARCQALVGYLPPNK--TTISEIQSLFTVKNLRSILGANNFPPG 76
L+ + + C + T C+ + Y NK TIS++ LF + N +L NN
Sbjct: 38 LNEIGQGARYSCKS-TQDSCRTFLVY-RANKHFNTISQVSKLFNM-NSDEVLQKNNLTSS 94
Query: 77 TPRNFSVPAQ-KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKI 135
+ F V Q K + +P++C CS G + Y V + IA +F LLK+ +
Sbjct: 95 SL--FDVLKQGKEVLIPVNCSCSGGYFQASL--SYKVLDNTTYSEIACGVFEGLLKHLTL 150
Query: 136 VEANNISNPDLIQIGQNLTIPLPCSCDDVDN-------AKVVHYAHVVEEGSSFALIAQK 188
E N+S + + L +PL C+C + N +V Y V+ G +++K
Sbjct: 151 AE-ENLSQGNKPEADSELHVPLVCACSESYNFTRSMKVKYLVTYPLVL--GDDPDKLSKK 207
Query: 189 FGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
FG + +N ++ S + + VPL
Sbjct: 208 FGISIEEFYAVNSLNPLSTVYPDTVVLVPL 237
>gi|315221599|ref|ZP_07863519.1| LysM domain protein [Streptococcus anginosus F0211]
gi|315189433|gb|EFU23128.1| LysM domain protein [Streptococcus anginosus F0211]
Length = 205
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
TG YTVK D L IA+ + +KIVE N I NPDLI++GQ L +
Sbjct: 22 TGAIASAESYTVKSGDTLSEIAKE---KNTSVEKIVELNKIENPDLIKVGQILEL 73
>gi|256853506|ref|ZP_05558876.1| endolysin [Enterococcus faecalis T8]
gi|422705414|ref|ZP_16763216.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0043]
gi|422741863|ref|ZP_16795885.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX2141]
gi|256711965|gb|EEU27003.1| endolysin [Enterococcus faecalis T8]
gi|315143421|gb|EFT87437.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX2141]
gi|315157260|gb|EFU01277.1| glycosyl hydrolase family 25 [Enterococcus faecalis TX0043]
Length = 433
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 132 YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGT 191
YQ + N ++NP+LI GQ L + N VV + V+ G + + IA K GT
Sbjct: 359 YQTLAALNGLTNPNLIYPGQILKV----------NGSVVSNIYTVQYGDNLSSIAAKLGT 408
Query: 192 DRDTLMKLNGIHDDSKLIAGEPL 214
TL LNG+ + + + G+ L
Sbjct: 409 TYQTLAALNGLANPNLIYPGQTL 431
>gi|44843525|gb|AAD10705.2| Lys44 [Oenococcus phage fOg44]
gi|57281907|emb|CAD19148.1| Lys44 protein [Oenococcus phage fOg44]
Length = 432
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA +G YQK+ N I +P +I G+ L + S KV
Sbjct: 335 YTVRSGDTLGAIAAK-YGT--TYQKLASLNGIGSPYIIIPGEKLKVSGSVSSSSASYYKV 391
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
G + + IA K+GT L+ LNG+ + + + G+ L +
Sbjct: 392 A-------SGDTLSAIASKYGTSVSKLVSLNGLKNANYIYVGQTLRI 431
>gi|421192247|ref|ZP_15649515.1| Phage lysin [Oenococcus oeni AWRIB548]
gi|421192294|ref|ZP_15649562.1| Phage lysin [Oenococcus oeni AWRIB548]
gi|399969772|gb|EJO04092.1| Phage lysin [Oenococcus oeni AWRIB548]
gi|399969819|gb|EJO04139.1| Phage lysin [Oenococcus oeni AWRIB548]
Length = 429
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA +G YQ + N I +P +I G+ L + S KV
Sbjct: 332 YTVQSGDTLGAIAAK-YGT--SYQNLASLNGIGSPYIIIPGEKLKVSGSVSSSSASYYKV 388
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
V G + + IA K+GT L+ LNG+ + + + GE L +
Sbjct: 389 V-------SGDTLSAIASKYGTSVSKLVSLNGLKNANYIYVGENLKI 428
>gi|390434991|ref|ZP_10223529.1| LysM domain/BON superfamily protein [Pantoea agglomerans IG1]
Length = 85
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L IA+ + +Y KI EAN +S+PD I GQ LTIP
Sbjct: 36 YTVKSGDTLSAIAKQFYNDASQYMKIFEANKNLLSSPDKIAPGQVLTIP 84
>gi|319940184|ref|ZP_08014537.1| transglycosylase SLT domain family protein [Streptococcus anginosus
1_2_62CV]
gi|319810655|gb|EFW06985.1| transglycosylase SLT domain family protein [Streptococcus anginosus
1_2_62CV]
Length = 205
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
TG YTVK D L IA+ + +KIVE N I NPDLI++GQ L +
Sbjct: 22 TGAIASAESYTVKSGDTLSEIAKE---KNTSVEKIVELNKIENPDLIKVGQILEL 73
>gi|367477680|ref|ZP_09477027.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
285]
gi|365270130|emb|CCD89495.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
285]
Length = 410
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 17/83 (20%)
Query: 76 GTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKI 135
G PR +PA KP K TV + D L I+R + G ++Y I
Sbjct: 340 GDPREAILPAAKP---------------EPKAATVTVARGDSLWHISRRLLGGGMRYAVI 384
Query: 136 VEANN--ISNPDLIQIGQNLTIP 156
+AN I +PDLI GQ TIP
Sbjct: 385 YKANREQIRSPDLIYPGQVFTIP 407
>gi|453064298|gb|EMF05269.1| LysM domain/BON superfamily protein [Serratia marcescens VGH107]
Length = 148
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVKK D L I++ ++G Y KI EAN +S+PD I GQ L IP
Sbjct: 99 YTVKKGDTLSAISKEMYGNANLYNKIFEANKPMLSSPDKIYPGQVLRIP 147
>gi|421727060|ref|ZP_16166225.1| LysM domain/BON superfamily protein [Klebsiella oxytoca M5al]
gi|410372061|gb|EKP26777.1| LysM domain/BON superfamily protein [Klebsiella oxytoca M5al]
Length = 149
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I++ ++G +YQ+I EAN +++PD I GQ L IP
Sbjct: 99 YTVKSGDTLSAISKAMYGSANEYQRIFEANKPMLTHPDKIYPGQVLIIP 147
>gi|294056595|ref|YP_003550253.1| peptidoglycan-binding lysin domain-containing protein
[Coraliomargarita akajimensis DSM 45221]
gi|293615928|gb|ADE56083.1| Peptidoglycan-binding lysin domain protein [Coraliomargarita
akajimensis DSM 45221]
Length = 379
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDN--- 166
YTV+K D L IA+ + I ANN S+ D+I++G+ L IP+
Sbjct: 188 YTVRKGDNLSKIAKKFNSSV---GAIKAANNKSS-DVIKVGEELVIPVANGSQPAPTALA 243
Query: 167 --------AKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
A H V+ G + IA+ +G LM+LN I D L G+ L V
Sbjct: 244 PAATTSAVAPSSSGTHTVQSGEYPSKIAKMYGMSSKELMELNNISDARSLQVGQVLKV 301
>gi|89095658|ref|ZP_01168552.1| YojL [Bacillus sp. NRRL B-14911]
gi|89089404|gb|EAR68511.1| YojL [Bacillus sp. NRRL B-14911]
Length = 226
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 26/158 (16%)
Query: 102 GVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPL---- 157
+++ VY+VKK D L IART + ++ AN + + +LI GQ L IP
Sbjct: 50 AAAEEQTVYSVKKGDSLYKIARTYD---VSVSELKTANKL-HANLIFPGQELKIPEADRT 105
Query: 158 --PCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPL- 214
P + D A V Y V+ G + ++Q+F T +T+ +LNG++ + LI G+ L
Sbjct: 106 AEPPASDRKTRADVSVY--TVQAGDTLWELSQRFQTPIETIKRLNGLNSNFLLI-GQRLI 162
Query: 215 ---DVPLKACNSSIKADSF-------DNY--LRVANGT 240
+ P AD+F D Y L+VA GT
Sbjct: 163 IQEETPYVDAQVVGAADNFTVEFKTEDGYVALKVAYGT 200
>gi|421490148|ref|ZP_15937522.1| LysM domain protein [Streptococcus anginosus SK1138]
gi|400373553|gb|EJP26481.1| LysM domain protein [Streptococcus anginosus SK1138]
Length = 205
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
TG YTVK D L IA+ + +KIVE N I NPDLI++GQ L +
Sbjct: 22 TGAIASAESYTVKSGDTLSEIAKE---KNTSVEKIVELNKIENPDLIKVGQILEL 73
>gi|423123797|ref|ZP_17111476.1| hypothetical protein HMPREF9694_00488 [Klebsiella oxytoca 10-5250]
gi|376400884|gb|EHT13494.1| hypothetical protein HMPREF9694_00488 [Klebsiella oxytoca 10-5250]
Length = 149
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I++ ++G +YQ+I EAN +++PD I GQ L IP
Sbjct: 99 YTVKSGDTLSAISKAMYGSANEYQRIFEANKPMLTHPDKIYPGQVLIIP 147
>gi|418559080|ref|ZP_13123626.1| CHAP domain protein [Staphylococcus aureus subsp. aureus 21252]
gi|418993868|ref|ZP_13541504.1| lysM domain protein [Staphylococcus aureus subsp. aureus CIG290]
gi|371975371|gb|EHO92665.1| CHAP domain protein [Staphylococcus aureus subsp. aureus 21252]
gi|377745918|gb|EHT69893.1| lysM domain protein [Staphylococcus aureus subsp. aureus CIG290]
Length = 229
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIVE----ANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 19 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 67
>gi|359482890|ref|XP_002283628.2| PREDICTED: proline-rich receptor-like protein kinase PERK10-like
[Vitis vinifera]
Length = 666
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 38/218 (17%)
Query: 9 VLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSIL 68
V L F V +S S + T+ C + + + P T++ IQS++ V
Sbjct: 14 VSLFFFVFQMVSVHSLSTTPMNCTDTSRLCTSFLAFKPTQNQTLALIQSMYDV------- 66
Query: 69 GANNFPPGTPRNFSVPAQKP--IKVPIHCICSNGTGVSDKVPVYTVKKDDGL--DFIART 124
P++ +V A P + +C C + T +TV+ +DG D +A
Sbjct: 67 --------LPKDLTVEATDPNYVFFKKNCSCESYTKKYFTNTTFTVRANDGFISDLVAEA 118
Query: 125 IFGQLL--KYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHY--AHVVEEGS 180
G + Y++ ++G +T+ L C C + + +Y ++V+ +G
Sbjct: 119 YGGLAVVPGYRRRA-----------RVGAVVTVRLYCGC----SIGLWNYLMSYVMRDGD 163
Query: 181 SFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
S +A +FG ++ +NGI + + G +PL
Sbjct: 164 SVESLASRFGVSMGSIEAVNGIDNPDNVTVGALYYIPL 201
>gi|429084828|ref|ZP_19147819.1| FIG00553508: hypothetical protein [Cronobacter condimenti 1330]
gi|426546067|emb|CCJ73860.1| FIG00553508: hypothetical protein [Cronobacter condimenti 1330]
Length = 148
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 77 TPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPV---------YTVKKDDGLDFIARTIFG 127
T + S A++ I V + I G V D V V YTVKK D L I++ ++G
Sbjct: 58 TGQGLSQEAKEKILVAVGNIAGIGH-VDDNVAVASPAPESQYYTVKKGDTLSAISQEVYG 116
Query: 128 QLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
+Y KI EAN +++P+ I GQ L IP
Sbjct: 117 DANQYPKIFEANKPMLTSPEKIYPGQVLRIP 147
>gi|296133636|ref|YP_003640883.1| cell wall hydrolase SleB [Thermincola potens JR]
gi|296032214|gb|ADG82982.1| cell wall hydrolase SleB [Thermincola potens JR]
Length = 258
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVKK D L I + FG ++A+N + + GQ L IP+ S +
Sbjct: 32 YTVKKGDTLYLIGQR-FGVS---AAALKASNGLTSNTVYPGQRLNIPVSSSVSSGNR--- 84
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+VV++G + LIA++FGT + + + D+ L G+ L +P +
Sbjct: 85 ----YVVQKGDTLYLIAKRFGTTVEAIKSASNYWKDT-LYVGQVLTIPQR 129
>gi|421189455|ref|ZP_15646770.1| Phage lysin [Oenococcus oeni AWRIB422]
gi|399972978|gb|EJO07165.1| Phage lysin [Oenococcus oeni AWRIB422]
Length = 429
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+ D L IA +G YQK+ N I +P +I G+ L + S KV
Sbjct: 332 YTVQTGDTLGGIAAK-YGT--TYQKLASLNGIGSPYIIIPGEKLKVSGSVSSSSASYYKV 388
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
G + + IA K+GT L+ LNG+ + + + GE L +
Sbjct: 389 A-------SGDTLSAIASKYGTSVSKLVSLNGLKNANYIYVGENLKI 428
>gi|289522334|ref|ZP_06439188.1| LysM domain/M23/M37 peptidase domain protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504170|gb|EFD25334.1| LysM domain/M23/M37 peptidase domain protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 474
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV++ D L IA + L + N++ NPDL++ G L IP N
Sbjct: 233 YTVQEGDSLWTIANKVN---LDINTLFGCNDLKNPDLLKPGSKLRIP---------NQDG 280
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V +G + + IA+K+G + + N I D+ LIAG + +P
Sbjct: 281 IFYK--VNKGDTLSSIAKKYGIYIEAIAAANSIETDAVLIAGSEIFLP 326
>gi|194466400|ref|ZP_03072387.1| glycoside hydrolase family 25 [Lactobacillus reuteri 100-23]
gi|194453436|gb|EDX42333.1| glycoside hydrolase family 25 [Lactobacillus reuteri 100-23]
Length = 368
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 76 GTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKI 135
GT +VPA +P++ H + GT Y V+ D L IA +G YQ +
Sbjct: 199 GTVPQINVPAPQPVQHVGHP--ATGT--------YIVQPGDTLSGIAEK-YG--TTYQNL 245
Query: 136 VEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDT 195
N+I NP+ I +GQ L + S ++ + V+ G + IA KFGT
Sbjct: 246 AAINSIGNPNQINVGQVLKVTGKASNENT---------YFVQSGDTLFGIATKFGTTVSD 296
Query: 196 LMKLNGIHDDSKLIAGEPL 214
L+ N I + + + G+ L
Sbjct: 297 LVSRNHIANPNVIYVGQKL 315
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCS 160
TG + Y V+ D L IA T FG + +V N+I+NP++I +GQ L +
Sbjct: 266 TGKASNENTYFVQSGDTLFGIA-TKFGTTVS--DLVSRNHIANPNVIYVGQKLYLAGNGQ 322
Query: 161 CDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ A+ V+ G + + IA KFG L + NGI + + + G+ + +
Sbjct: 323 SN----------AYTVQAGDTLSGIAAKFGKTWQALAQKNGIANPNVIYVGQTIQL 368
>gi|406972244|gb|EKD96068.1| peptidoglycan-binding lysin protein [uncultured bacterium]
Length = 214
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
YTV++ D L IA+ ++G K+ ++ +AN + NP LI G T+P
Sbjct: 167 YTVERGDSLWKIAQKVYGDPYKWVELAKANKLVNPGLIHAGNVFTVP 213
>gi|340781427|ref|YP_004748034.1| cell division protein FtsI [Acidithiobacillus caldus SM-1]
gi|340555580|gb|AEK57334.1| Cell division protein FtsI (Peptidoglycan synthetase)
[Acidithiobacillus caldus SM-1]
Length = 411
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 176 VEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
V G ++A +AQ++G D L +LNG+ D ++L AGE L VP+
Sbjct: 340 VPSGLTWARLAQRYGLDTAALQRLNGLPDTAQLDAGELLKVPV 382
>gi|297530516|ref|YP_003671791.1| NLP/P60 protein [Geobacillus sp. C56-T3]
gi|297253768|gb|ADI27214.1| NLP/P60 protein [Geobacillus sp. C56-T3]
Length = 341
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTV+K D L IAR G + K + N++S+ DLI GQ L + P ++ +
Sbjct: 26 YTVQKGDTLWKIARQ-SGTTVAALK--QENDLSS-DLIFPGQVLRVNEPNKSNETSS--- 78
Query: 170 VHYAHVVEEGSSFALIAQKFGTDRDTLMKLN-GIHDDSKLIAGEPLDV 216
+ VE G + + IA+KFGT D L+KLN I + + AG+ L V
Sbjct: 79 --NTYTVEPGDTLSGIARKFGTTVDALLKLNPSITNPDFIRAGQKLQV 124
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,606,086,069
Number of Sequences: 23463169
Number of extensions: 237340111
Number of successful extensions: 551909
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 1629
Number of HSP's that attempted gapping in prelim test: 548692
Number of HSP's gapped (non-prelim): 3455
length of query: 358
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 215
effective length of database: 9,003,962,200
effective search space: 1935851873000
effective search space used: 1935851873000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)