BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018290
(358 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23006|LYM2_ARATH LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis
thaliana GN=LYM2 PE=1 SV=1
Length = 350
Score = 300 bits (767), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/350 (49%), Positives = 224/350 (64%), Gaps = 21/350 (6%)
Query: 4 FQLKLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKN 63
F L +L+ + LS T +F CS T+ CQ+LVGY N TT+ IQ+LF VKN
Sbjct: 6 FTLLGLLVSLSFFLTLSAQMTG-NFNCSGSTST-CQSLVGYSSKNATTLRNIQTLFAVKN 63
Query: 64 LRSILGANNFPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR 123
LRSILGANN P T R+ V + ++VPIHC CSNGTGVS++ YT+KKDD L F+A
Sbjct: 64 LRSILGANNLPLNTSRDQRVNPNQVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVAT 123
Query: 124 TIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFA 183
IFG L+ Y+KI E N I +P+ I+IGQ IPLPCSCD ++ VVHYAHVV+ GSS
Sbjct: 124 EIFGGLVTYEKISEVNKIPDPNKIEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSLG 183
Query: 184 LIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTF 243
IA +FGTD TL +LNGI DS+L+A +PLDVPLKAC+SS++ DS D L ++N +Y F
Sbjct: 184 EIAAQFGTDNTTLAQLNGIIGDSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYVF 243
Query: 244 TANSCVKCQCDATNNWTLQCK-PSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTTTSNNC 302
TAN+CVKC CDA NWTL C+ S+ +PS+ W+TCP D L+ +C
Sbjct: 244 TANNCVKCTCDALKNWTLSCQSSSEIKPSN----WQTCPPFSQCDGALLNA-------SC 292
Query: 303 NR-TTCEYAGYNNLSILTTLNSLSTCP---SPSNNASRI-GSWNLLLISI 347
+ C YAGY+N +I TT + CP P N AS + S+N +++ I
Sbjct: 293 RQPRDCVYAGYSNQTIFTTAS--PACPDSAGPDNYASTLSSSFNFVIVLI 340
>sp|Q8H8C7|CEBIP_ORYSJ Chitin elicitor-binding protein OS=Oryza sativa subsp. japonica
GN=CEBIP PE=1 SV=1
Length = 356
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 181/335 (54%), Gaps = 22/335 (6%)
Query: 27 DFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFSVPAQ 86
+F C+ + C++ + Y PN TT + + F L +LGAN P GT + V A
Sbjct: 30 NFTCAVASGTTCKSAILYTSPNATTYGNLVARFNTTTLPDLLGANGLPDGTLSSAPVAAN 89
Query: 87 KPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDL 146
+K+P C C+ G SD++P+Y V+ DGLD IAR +F + YQ+I ANNI +P+
Sbjct: 90 STVKIPFRCRCNGDVGQSDRLPIYVVQPQDGLDAIARNVFNAFVTYQEIAAANNIPDPNK 149
Query: 147 IQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDS 206
I + Q L IPLPCSCD + + V+H A+ V +G + + IA K+G TL+ N I D +
Sbjct: 150 INVSQTLWIPLPCSCDKEEGSNVMHLAYSVGKGENTSAIAAKYGVTESTLLTRNKIDDPT 209
Query: 207 KLIAGEPLDVPLKACNSSIKADSFD-NYLRVANGTYTFTANSCVKCQCDATNNWTLQCKP 265
KL G+ LDVPL C SSI S D N + + +GTY FTA +C++C C +T + L C
Sbjct: 210 KLQMGQILDVPLPVCRSSISDTSADHNLMLLPDGTYGFTAGNCIRCSCSST-TYQLNCTA 268
Query: 266 SQFQPSSPNSRWKTCPSM-LCGDSESLSIGNTTTSNNCNRTTCEYAGYNNLSILTTLNSL 324
Q K CPS+ LC + L N T C TTC Y+GY+N S L SL
Sbjct: 269 VQN---------KGCPSVPLCNGTLKLGETNGT---GCGSTTCAYSGYSNSSSLIIQTSL 316
Query: 325 ST-----CPSPSNNASRIGS--WNLLLISIFLVLL 352
+T C + S+ W++ +IS +VL+
Sbjct: 317 ATNQTTACQRGGSGRSQFARSMWSMSVISFHMVLI 351
>sp|Q93ZH0|LYM1_ARATH LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis
thaliana GN=LYM1 PE=1 SV=1
Length = 416
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 176/336 (52%), Gaps = 22/336 (6%)
Query: 8 LVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSI 67
L+ + + ++L+ +TA+ + C AL+GY +SE+ SLF V + SI
Sbjct: 10 LIFVSLILASSLTFTATAKSTIEPCSSNDTCNALLGYTLYTDLKVSEVASLFQVDPI-SI 68
Query: 68 LGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTI 125
L AN P N +P++ +K+PI C C +G S Y + D L IA ++
Sbjct: 69 LLANAIDISYPDVENHILPSKLFLKIPITCSCVDGIRKSVST-HYKTRPSDNLGSIADSV 127
Query: 126 FGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSFA 183
+G L+ ++I EAN++++P L+ +G +L IPLPC+C + DN+ V+ ++VV+E +
Sbjct: 128 YGGLVSAEQIQEANSVNDPSLLDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVKEIDTLV 187
Query: 184 LIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYTF 243
IA+++ T LM +N + + +G+ L VPL AC S + D L V NG+Y
Sbjct: 188 GIARRYSTTITDLMNVNAM-GAPDVSSGDILAVPLSACASKFPRYASDFGLIVPNGSYAL 246
Query: 244 TANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TSN 300
A CV+C C A + L C+P+ S +C SM C +S L +GN T TS
Sbjct: 247 AAGHCVQCSC-ALGSRNLYCEPA--------SLAVSCSSMQCRNSN-LMLGNITVQQTSA 296
Query: 301 NCNRTTCEYAGYNNLSILTTL-NSLS-TCPSPSNNA 334
CN TTC+Y G N +ILT L SL CP P A
Sbjct: 297 GCNVTTCDYNGIANGTILTMLTRSLQPRCPGPQQFA 332
>sp|Q6NPN4|LYM3_ARATH LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis
thaliana GN=LYM3 PE=1 SV=1
Length = 423
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 177/341 (51%), Gaps = 22/341 (6%)
Query: 7 KLVLLLFTVCAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRS 66
K +LL + ++L++++TA+ + C +L+GY ++E+ SLF V + S
Sbjct: 6 KPLLLFLILASSLASMATAKSTIEPCSSKDTCNSLLGYTLYTDLKVTEVASLFQVDPV-S 64
Query: 67 ILGANNFPPGTP--RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIART 124
+L +N+ P N +PA+ +K+PI C C +G S Y + D L IA +
Sbjct: 65 MLLSNSIDISYPDVENHVLPAKLFLKIPITCSCVDGIRKSLSTH-YKTRTSDTLGSIADS 123
Query: 125 IFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSC-DDVDNA-KVVHYAHVVEEGSSF 182
++G L+ ++I AN+ ++ ++ +G L IPLPC+C + D + ++ ++VV +
Sbjct: 124 VYGGLVSPEQIQVANSETDLSVLDVGTKLVIPLPCACFNGTDESLPALYLSYVVRGIDTM 183
Query: 183 ALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGTYT 242
A IA++F T L +N + + G+ L VPL AC+S+ + D L + NG+Y
Sbjct: 184 AGIAKRFSTSVTDLTNVNAM-GAPDINPGDILAVPLLACSSNFPKYATDYGLIIPNGSYA 242
Query: 243 FTANSCVKCQCDATNNWTLQCKPSQFQPSSPNSRWKTCPSMLCGDSESLSIGNTT---TS 299
TA CV+C C + ++ C+P+ S C SM C +S + +GN T +S
Sbjct: 243 LTAGHCVQCSC-VLGSRSMYCEPASISVS--------CSSMRCRNSNFM-LGNITSQQSS 292
Query: 300 NNCNRTTCEYAGYNNLSILTTLN-SLS-TCPSPSNNASRIG 338
+ C TTC Y G+ + +ILTTL+ SL CP P A I
Sbjct: 293 SGCKLTTCSYNGFASGTILTTLSMSLQPRCPGPQQLAPLIA 333
>sp|Q9RVY3|Y888_DEIRA Uncharacterized protein DR_0888 OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=DR_0888 PE=1
SV=1
Length = 253
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 32/48 (66%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
VYTVK D L IA +G ++Y+KI NNISNPDLIQ GQ L IP
Sbjct: 205 VYTVKPGDSLSKIAEHYYGDQMEYKKIAHYNNISNPDLIQPGQKLRIP 252
>sp|O64825|LYK4_ARATH LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana GN=LYK4
PE=1 SV=1
Length = 612
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 38 CQALVGYLP-PNKTTISEIQSLFTVK-NLRSILGANNFPPGTPRNFSVPAQKPIKVPIHC 95
CQA V + P+ +T++ I SLF+V +L S L N+ P T S P+ + + +P+ C
Sbjct: 55 CQAYVIFRSTPSFSTVTSISSLFSVDPSLVSSL--NDASPST----SFPSGQQVIIPLTC 108
Query: 96 ICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
C+ S+ YT++ +D IA L Q + + NN+S+ L G + +
Sbjct: 109 SCTGDDSQSN--ITYTIQPNDSYFAIANDTLQGLSTCQALAKQNNVSSQSLFP-GMRIVV 165
Query: 156 PLPCSCD-----DVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGI-HDDSKLI 209
P+ C+C + D K + VV E + A+I+ +FG + +K N + ++S++
Sbjct: 166 PIRCACPTAKQINEDGVKYLMSYTVVFE-DTIAIISDRFGVETSKTLKANEMSFENSEVF 224
Query: 210 AGEPLDVPL 218
+ +PL
Sbjct: 225 PFTTILIPL 233
>sp|Q8CMN2|SLE1_STAES N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=sle1 PE=3 SV=1
Length = 324
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRAKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTATY--TVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSS 224
+ V+ G S + IA K+GT +M+LNG+ ++ + G+ L V KA +SS
Sbjct: 86 YTVKAGDSLSSIAAKYGTTYQKIMQLNGL-NNYLIFPGQKLKVSGKATSSS 135
>sp|Q5HRU2|SLE1_STAEQ N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=sle1 PE=3
SV=1
Length = 324
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 109 VYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNA- 167
VYTVK D L IA +G YQKI++ N ++N LI GQ L + + A
Sbjct: 85 VYTVKAGDSLSSIAAK-YGTT--YQKIMQLNGLNNY-LIFPGQKLKVSGKATSSSRAKAS 140
Query: 168 ----KVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVP 217
+ Y V+ G S + IA K+GT +M+LNG+ + + G+ L VP
Sbjct: 141 GSSGRTATY--TVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSS 224
+ V+ G S + IA K+GT +M+LNG+ ++ + G+ L V KA +SS
Sbjct: 86 YTVKAGDSLSSIAAKYGTTYQKIMQLNGL-NNYLIFPGQKLKVSGKATSSS 135
>sp|Q9ZNI1|LYTN_STAA8 Probable cell wall hydrolase LytN OS=Staphylococcus aureus (strain
NCTC 8325) GN=lytN PE=2 SV=2
Length = 383
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>sp|Q5HGI5|LYTN_STAAC Probable cell wall hydrolase LytN OS=Staphylococcus aureus (strain
COL) GN=lytN PE=3 SV=1
Length = 383
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>sp|Q7A5Y8|LYTN_STAAN Probable cell wall hydrolase LytN OS=Staphylococcus aureus (strain
N315) GN=lytN PE=3 SV=2
Length = 383
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>sp|Q99UM3|LYTN_STAAM Probable cell wall hydrolase LytN OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=lytN PE=3 SV=2
Length = 383
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>sp|Q7A123|LYTN_STAAW Probable cell wall hydrolase LytN OS=Staphylococcus aureus (strain
MW2) GN=lytN PE=3 SV=2
Length = 383
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>sp|Q6G9W6|LYTN_STAAS Probable cell wall hydrolase LytN OS=Staphylococcus aureus (strain
MSSA476) GN=lytN PE=3 SV=2
Length = 383
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>sp|Q6GHI8|LYTN_STAAR Probable cell wall hydrolase LytN OS=Staphylococcus aureus (strain
MRSA252) GN=lytN PE=3 SV=2
Length = 383
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 106 KVPVYTVKKDDGLDFIARTIFGQLLKYQKIV----EANNISNPDLIQIGQNLTIPL 157
K +YTVKK D L IA LKY+ V NNI+NP+LI IGQ L +P+
Sbjct: 173 KTQIYTVKKGDTLSAIA-------LKYKTTVSNIQNTNNIANPNLIFIGQKLKVPM 221
>sp|P37531|YAAH_BACSU Spore germination protein YaaH OS=Bacillus subtilis (strain 168)
GN=yaaH PE=2 SV=1
Length = 427
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRD 194
I E N I NPD + +GQ + IP+ D V+ G + IA++F T
Sbjct: 22 ITETNEIPNPDSLVVGQTIVIPIAGQFYD------------VKRGDTLTSIARQFNTTAA 69
Query: 195 TLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSF 230
L ++N I ++ L G L +P A I+++++
Sbjct: 70 ELARVNRIQLNTVLQIGFRLYIP-PAPKRDIESNAY 104
>sp|Q49UX4|SLE1_STAS1 N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sle1 PE=3 SV=1
Length = 327
Score = 38.5 bits (88), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKV 169
YTVK D L IA +G YQKI+ N +SN + I GQ L + S + +
Sbjct: 88 YTVKSGDTLSGIAAK-YGTT--YQKIMSLNGLSNFN-IYPGQKLKVSGAASSSSSNTSGN 143
Query: 170 VHYA----HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDV 216
+ V+ G S + IA K+GT +M LNG+ + + G+ L V
Sbjct: 144 TSSGSTTTYTVKSGDSLSAIAAKYGTTYQKIMSLNGL-TNFNIYPGQKLKV 193
>sp|Q2YVT4|SLE1_STAAB N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=sle1 PE=3 SV=1
Length = 335
Score = 38.5 bits (88), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV----- 164
YTV+ D L IA + +G YQ I+ N ++N I GQ L + S +
Sbjct: 93 YTVQAGDSLSLIA-SKYGT--TYQNIMRLNGLNN-FFIYPGQKLKVSGTASSSNAASNSS 148
Query: 165 ---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
N+ Y + V+ G S +LIA K+GT +M LNG+ ++ + G+ L V A
Sbjct: 149 RPSTNSGGGSY-YTVQAGDSLSLIASKYGTTYQKIMSLNGL-NNFFIYPGQKLKVTGNAT 206
Query: 222 NS 223
+S
Sbjct: 207 SS 208
>sp|Q6GJK9|SLE1_STAAR N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain MRSA252) GN=sle1 PE=3 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD---- 165
YTV+ D L IA +G YQ I+ N ++N I GQ L + S +
Sbjct: 93 YTVQAGDSLSLIASK-YGT--TYQNIMRLNGLNN-FFIYPGQKLKVSGTASSSNSTSNSS 148
Query: 166 ----NAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHD 204
N+ Y + V+ G S +LIA K+GT +M+LNG+++
Sbjct: 149 RPSTNSSGGSY-YTVQAGDSLSLIASKYGTTYQNIMRLNGLNN 190
>sp|Q7A1T4|SLE1_STAAW N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain MW2) GN=sle1 PE=3 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV----- 164
YTV+ D L IA + +G YQ I+ N ++N I GQ L + S +
Sbjct: 93 YTVQAGDSLSLIA-SKYGT--TYQNIMRLNGLNN-FFIYPGQKLKVSGTASSSNAASNSS 148
Query: 165 ---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
N+ Y + V+ G S +LIA K+GT +M LNG+ ++ + G+ L V A
Sbjct: 149 RPSTNSGGGSY-YTVQAGDSLSLIASKYGTTYQKIMSLNGL-NNFFIYPGQKLKVTGNAS 206
Query: 222 NSSIKA 227
+S A
Sbjct: 207 TNSGSA 212
>sp|P0C1U7|SLE1_STAAU N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
GN=sle1 PE=4 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV----- 164
YTV+ D L IA + +G YQ I+ N ++N I GQ L + S +
Sbjct: 93 YTVQAGDSLSLIA-SKYGT--TYQNIMRLNGLNN-FFIYPGQKLKVSGTASSSNAASNSS 148
Query: 165 ---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
N+ Y + V+ G S +LIA K+GT +M LNG+ ++ + G+ L V A
Sbjct: 149 RPSTNSGGGSY-YTVQAGDSLSLIASKYGTTYQKIMSLNGL-NNFFIYPGQKLKVTGNAS 206
Query: 222 NSSIKA 227
+S A
Sbjct: 207 TNSGSA 212
>sp|Q6GC24|SLE1_STAAS N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain MSSA476) GN=sle1 PE=3 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV----- 164
YTV+ D L IA + +G YQ I+ N ++N I GQ L + S +
Sbjct: 93 YTVQAGDSLSLIA-SKYGT--TYQNIMRLNGLNN-FFIYPGQKLKVSGTASSSNAASNSS 148
Query: 165 ---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
N+ Y + V+ G S +LIA K+GT +M LNG+ ++ + G+ L V A
Sbjct: 149 RPSTNSGGGSY-YTVQAGDSLSLIASKYGTTYQKIMSLNGL-NNFFIYPGQKLKVTGNAS 206
Query: 222 NSSIKA 227
+S A
Sbjct: 207 TNSGSA 212
>sp|Q7A7E0|SLE1_STAAN N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain N315) GN=sle1 PE=1 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV----- 164
YTV+ D L IA + +G YQ I+ N ++N I GQ L + S +
Sbjct: 93 YTVQAGDSLSLIA-SKYGT--TYQNIMRLNGLNN-FFIYPGQKLKVSGTASSSNAASNSS 148
Query: 165 ---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
N+ Y + V+ G S +LIA K+GT +M LNG+ ++ + G+ L V A
Sbjct: 149 RPSTNSGGGSY-YTVQAGDSLSLIASKYGTTYQKIMSLNGL-NNFFIYPGQKLKVTGNAS 206
Query: 222 NSSIKA 227
+S A
Sbjct: 207 TNSGSA 212
>sp|Q5HIL2|SLE1_STAAC N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain COL) GN=sle1 PE=3 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV----- 164
YTV+ D L IA + +G YQ I+ N ++N I GQ L + S +
Sbjct: 93 YTVQAGDSLSLIA-SKYGT--TYQNIMRLNGLNN-FFIYPGQKLKVSGTASSSNAASNSS 148
Query: 165 ---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
N+ Y + V+ G S +LIA K+GT +M LNG+ ++ + G+ L V A
Sbjct: 149 RPSTNSGGGSY-YTVQAGDSLSLIASKYGTTYQKIMSLNGL-NNFFIYPGQKLKVTGNAS 206
Query: 222 NSSIKA 227
+S A
Sbjct: 207 TNSGSA 212
>sp|Q2G0U9|SLE1_STAA8 N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain NCTC 8325) GN=sle1 PE=1 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV----- 164
YTV+ D L IA + +G YQ I+ N ++N I GQ L + S +
Sbjct: 93 YTVQAGDSLSLIA-SKYGT--TYQNIMRLNGLNN-FFIYPGQKLKVSGTASSSNAASNSS 148
Query: 165 ---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
N+ Y + V+ G S +LIA K+GT +M LNG+ ++ + G+ L V A
Sbjct: 149 RPSTNSGGGSY-YTVQAGDSLSLIASKYGTTYQKIMSLNGL-NNFFIYPGQKLKVTGNAS 206
Query: 222 NSSIKA 227
+S A
Sbjct: 207 TNSGSA 212
>sp|Q2FJH7|SLE1_STAA3 N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain USA300) GN=sle1 PE=3 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDV----- 164
YTV+ D L IA + +G YQ I+ N ++N I GQ L + S +
Sbjct: 93 YTVQAGDSLSLIA-SKYGT--TYQNIMRLNGLNN-FFIYPGQKLKVSGTASSSNAASNSS 148
Query: 165 ---DNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKAC 221
N+ Y + V+ G S +LIA K+GT +M LNG+ ++ + G+ L V A
Sbjct: 149 RPSTNSGGGSY-YTVQAGDSLSLIASKYGTTYQKIMSLNGL-NNFFIYPGQKLKVTGNAS 206
Query: 222 NSSIKA 227
+S A
Sbjct: 207 TNSGSA 212
>sp|P39800|XLYA_BACSU N-acetylmuramoyl-L-alanine amidase XlyA OS=Bacillus subtilis
(strain 168) GN=xlyA PE=1 SV=1
Length = 297
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCD 162
Y VK+ D L IAR FG + ++ E NNI +P+LI++GQ L + P + +
Sbjct: 161 YVVKQGDTLTSIARA-FG--VTVAQLQEWNNIEDPNLIRVGQVLIVSAPSAAE 210
>sp|P0ADE6|YGAU_ECOLI Uncharacterized protein YgaU OS=Escherichia coli (strain K12)
GN=ygaU PE=1 SV=2
Length = 149
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I++ ++G Y KI EAN + +PD I GQ L IP
Sbjct: 99 YTVKSGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIP 147
>sp|P0ADE7|YGAU_ECOL6 Uncharacterized protein YgaU OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=ygaU PE=3 SV=2
Length = 149
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANN--ISNPDLIQIGQNLTIP 156
YTVK D L I++ ++G Y KI EAN + +PD I GQ L IP
Sbjct: 99 YTVKSGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIP 147
>sp|Q9Z7W1|Y593_CHLPN Uncharacterized protein CPn_0593/CP_0155/CPj0593/CpB0616
OS=Chlamydia pneumoniae GN=CPn_0593 PE=3 SV=1
Length = 362
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLK 219
+VV++G S LIA++FG D +++ NG+ + +L G+ L +P K
Sbjct: 316 YVVQDGDSLWLIAKRFGIPMDKIIQKNGL-NHHRLFPGKVLKLPAK 360
>sp|D7UPN3|CERK1_ORYSJ Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica
GN=CERK1 PE=1 SV=1
Length = 605
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 101 TGVSDKVPVYTVKKDDGLDFIARTIFG-QLLKYQKIVEAN-NISNPDLIQIGQNLTIPLP 158
G S + Y + L FIA TIF YQ ++ N I+NPD + G + +P P
Sbjct: 28 AGCSLAIAAYYFSEGSNLTFIA-TIFAIGGGGYQALLPYNPAITNPDYVVTGDRVLVPFP 86
Query: 159 CSC 161
CSC
Sbjct: 87 CSC 89
>sp|Q4L3C1|SLE1_STAHJ N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=sle1 PE=3 SV=1
Length = 329
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 26/218 (11%)
Query: 16 CAALSTLSTAQDFKCSAQTAARCQALVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPP 75
ALSTL Q + T ++L T+S+++SL
Sbjct: 13 TGALSTLFAHQAEASTTHTVRSGESLWSISHHYGITVSKLKSL----------------N 56
Query: 76 GTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKI 135
G N P Q +KV S+ + + YTV+ D L IA + +G Y+ I
Sbjct: 57 GLSSNLIFPNQ-VLKVSGSSNYSSRSNYGNSSSTYTVRAGDSLSSIA-SRYGT--TYRHI 112
Query: 136 VEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHY----AHVVEEGSSFALIAQKFGT 191
+ N + N LI GQ L + S + + + V G S + IA ++GT
Sbjct: 113 MNLNGL-NSFLIFPGQQLKVSGSVSSNSHSSYNSNSGGSSSTYTVRYGDSLSSIASRYGT 171
Query: 192 DRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADS 229
+M+LNG+ ++ + G+ L V A +++ S
Sbjct: 172 TYQHIMRLNGL-NNFFIYPGQKLRVSGSASSNTYSTRS 208
>sp|Q6B4J5|EXSA_BACCE Spore coat assembly protein ExsA OS=Bacillus cereus GN=exsA PE=2
SV=1
Length = 643
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLI-AGEPLDVPLKACNSSIKA 227
H+V++G + IA+K+G D DTL K N + LI G + VP K+ + +A
Sbjct: 4 HIVQKGDTLWKIAKKYGVDFDTLKKTNTQLSNPDLIMPGMKIKVPSKSVHMKQQA 58
>sp|P07540|LYS_BPPZA Lysozyme OS=Bacillus phage PZA GN=15 PE=3 SV=1
Length = 258
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 51/131 (38%), Gaps = 35/131 (26%)
Query: 73 FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR---TIFGQL 129
F GTP+N S GT S P Y VK D L IA+ T L
Sbjct: 142 FNSGTPKN----------------VSRGTSSSKVTPKYKVKSGDNLTKIAKKHNTTVATL 185
Query: 130 LKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKF 189
LK +I +P++I++GQ TI + S H V+ G + + IA
Sbjct: 186 LKLNP-----SIKDPNMIRVGQ--TINVTGSGGKT---------HKVKSGDTLSKIAVDN 229
Query: 190 GTDRDTLMKLN 200
T LM LN
Sbjct: 230 KTTVSRLMSLN 240
>sp|O07532|LYTF_BACSU Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168)
GN=lytF PE=1 SV=2
Length = 488
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 135 IVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHY-----AHVVEEGSSFALIAQKF 189
+ AN++S ++ IGQ LTIP S + + V+ G S LIA +F
Sbjct: 51 LTSANHLSTT-VLSIGQTLTIPGSKSSTSSSTSSSTTKKSGSSVYTVKSGDSLWLIANEF 109
Query: 190 GTDRDTLMKLNGIHDDSKLI-AGEPLDV 216
L KLNG+ D LI AG+ L V
Sbjct: 110 KMTVQELKKLNGLSSD--LIRAGQKLKV 135
>sp|O05495|YDHD_BACSU Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis
(strain 168) GN=ydhD PE=1 SV=2
Length = 420
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 172 YAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPL 218
+ H+V G S I +++G D + +NG+ D++ ++ G+ L +PL
Sbjct: 2 FIHIVGPGDSLFSIGRRYGASVDQIRGVNGL-DETNIVPGQALLIPL 47
>sp|P11187|LYS_BPPH2 Lysozyme OS=Bacillus phage phi29 GN=15 PE=3 SV=1
Length = 258
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 51/131 (38%), Gaps = 35/131 (26%)
Query: 73 FPPGTPRNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR---TIFGQL 129
F GTP+N S GT + P Y VK D L IA+ T L
Sbjct: 142 FNSGTPKN----------------VSRGTSSTKTTPKYKVKSGDNLTKIAKKHNTTVATL 185
Query: 130 LKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKF 189
LK +I +P++I++GQ TI + S H V+ G + + IA
Sbjct: 186 LKLNP-----SIKDPNMIRVGQ--TINVTGSGGKT---------HKVKSGDTLSKIAVDN 229
Query: 190 GTDRDTLMKLN 200
T LM LN
Sbjct: 230 KTTVSRLMSLN 240
>sp|Q10614|Y1288_MYCTU Uncharacterized protein Rv1288/MT1326 OS=Mycobacterium tuberculosis
GN=Rv1288 PE=4 SV=1
Length = 456
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 107 VPVYTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTIP 156
V + V + L +A +G Y+ I A+ I++PD++ +GQ L +P
Sbjct: 2 VSTHAVVAGETLSALALRFYGDAELYRLIAAASGIADPDVVNVGQRLIMP 51
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 110 YTVKKDDGLDFIARTIFGQLLKYQKIVEANNISNPDLIQIGQNLTI 155
YTV D L +A +G Y I N I++P +I +GQ L I
Sbjct: 107 YTVVAGDTLSALAARFYGDASLYPLIAAVNGIADPGVIDVGQVLVI 152
>sp|Q03415|ENP1_LYSSH Gamma-D-glutamyl-L-diamino acid endopeptidase 1 OS=Lysinibacillus
sphaericus PE=1 SV=1
Length = 396
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 29/134 (21%)
Query: 126 FGQLLK--YQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFA 183
F L K Q ++++N NP L+Q+GQ + IP V ++ + +G S
Sbjct: 14 FSDLFKIPLQLLLDSNRNINPQLLQVGQRIQIP-----------GYVTTSYTITQGDSLW 62
Query: 184 LIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYLRVANGT--- 240
IAQ + ++ +N S+L G+ + VP + R+ NG
Sbjct: 63 QIAQNKNLPLNAILLVNPEIQPSRLHIGQTIQVPQRLT------------WRLVNGQQNY 110
Query: 241 -YTFTANSCVKCQC 253
Y+ N K Q
Sbjct: 111 DYSMMMNDIKKLQT 124
>sp|O78450|CFXQ_GUITH Protein cfxQ homolog OS=Guillardia theta GN=cfxQ PE=3 SV=1
Length = 293
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 41 LVGYLPPNKTTISEIQSLFTVKNLRSILGANNFPPGTPRNFS 82
LVG L P KT I EI +L V LR +LG + PG +F+
Sbjct: 31 LVG-LIPVKTRIKEIAALLLVHRLRKLLGLTSANPGLHMSFT 71
>sp|P36685|LPPB_HAESO Outer membrane antigenic lipoprotein B (Fragment) OS=Haemophilus
somnus GN=lppB PE=3 SV=2
Length = 337
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 79 RNFSVPAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIARTIFGQLLKYQKIVEA 138
+NF +P VP++ G D Y V+K D + IA I G +K ++
Sbjct: 92 QNFEIPRDPKTNVPVYSKIDKGFYKGD---TYKVRKGDTMFLIAY-ISGMDIK--ELATL 145
Query: 139 NNISNPDLIQIGQNLTI 155
NN+S P + IGQ L I
Sbjct: 146 NNMSEPYHLSIGQVLKI 162
>sp|Q37896|LYS_BPB03 Lysozyme OS=Bacillus phage B103 GN=15 PE=3 SV=1
Length = 263
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 174 HVVEEGSSFALIAQKFGTDRDTLMKLN-GIHDDSKLIAGEPLDVPLKACNSSIK 226
HVV++G + + IA+K T TL++LN I + +K+ G+ ++V S++K
Sbjct: 165 HVVKKGDTLSEIAKKIKTSTKTLLELNPTIKNPNKIYVGQRINVGGSPVKSTLK 218
>sp|Q1RLL3|CPNE9_MOUSE Copine-9 OS=Mus musculus GN=Cpne9 PE=2 SV=1
Length = 553
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 84 PAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR--TIFGQLLKYQKIVEANNI 141
P +P +P+ +C+ + K+ VY +D DFI T + +L K Q +
Sbjct: 198 PVWQPFSIPVRALCNGDYDRTVKIDVYDWDRDGSHDFIGEFTTSYRELSKAQNQFTVYEV 257
Query: 142 SNP 144
NP
Sbjct: 258 LNP 260
>sp|Q5BJS7|CPNE9_RAT Copine-9 OS=Rattus norvegicus GN=Cpne9 PE=2 SV=1
Length = 553
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 84 PAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR--TIFGQLLKYQKIVEANNI 141
P +P +P+ +C+ + K+ VY +D DFI T + +L K Q +
Sbjct: 198 PVWQPFSIPVRALCNGDYDRTVKIDVYDWDRDGSHDFIGEFTTSYRELSKAQNQFTVYEV 257
Query: 142 SNP 144
NP
Sbjct: 258 LNP 260
>sp|Q8IYJ1|CPNE9_HUMAN Copine-9 OS=Homo sapiens GN=CPNE9 PE=1 SV=3
Length = 553
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 84 PAQKPIKVPIHCICSNGTGVSDKVPVYTVKKDDGLDFIAR--TIFGQLLKYQKIVEANNI 141
P +P +P+ +C+ + K+ VY +D DFI T + +L K Q +
Sbjct: 198 PVWQPFSIPVRALCNGDYDRTVKIDVYDWDRDGSHDFIGEFTTSYRELSKAQNQFTVYEV 257
Query: 142 SNP 144
NP
Sbjct: 258 LNP 260
>sp|Q01839|P60_LISWE Probable endopeptidase p60 OS=Listeria welshimeri GN=iap PE=3 SV=1
Length = 524
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 175 VVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIAGEPLDVPLKACNSSIKADSFDNYL 234
VVE G + IAQ GT D L K N + D K++ G+ L V A + K+ S +L
Sbjct: 31 VVEAGDTLWGIAQSKGTTVDALKKANNLTSD-KIVPGQKLQVTEVASEKTEKSVSA-TWL 88
Query: 235 RVANGT-------YTFTANSCVKCQCDATNNW 259
V +G + + V + +N W
Sbjct: 89 NVRSGAGVDNSIVTSLKGGTKVTVEAAESNGW 120
>sp|A8R7E6|CERK1_ARATH Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1
PE=1 SV=1
Length = 617
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 126 FGQLLKYQKIVEANNISNPDLIQIGQNLTIPLPCSCDDVD 165
F +L+Y +NI + D IQ+G + +P PC C D
Sbjct: 63 FDPILRYN-----SNIKDKDRIQMGSRVLVPFPCECQPGD 97
>sp|Q9P403|CIH1_COLLN Intracellular hyphae protein 1 OS=Colletotrichum lindemuthianum
GN=CIH1 PE=1 SV=1
Length = 230
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 151 QNLTIPLPCSCDDVDNAKVVHYAHVVEEGSSFALIAQKFGTDRDTLMKLNGIHDDSKLIA 210
+N T+P+P D K+ H V+ G S IA+K+ T + KLN + D + +
Sbjct: 93 KNNTLPVPTCVD----GKI--KTHKVKSGESLTTIAEKYDTGICNIAKLNNLADPNFVDL 146
Query: 211 GEPLDVPLKACN----SSIKADS 229
+ L +P AC S IK D
Sbjct: 147 NQDLQIPTDACEKDNTSCIKPDG 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,401,121
Number of Sequences: 539616
Number of extensions: 5565892
Number of successful extensions: 13317
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 13208
Number of HSP's gapped (non-prelim): 128
length of query: 358
length of database: 191,569,459
effective HSP length: 119
effective length of query: 239
effective length of database: 127,355,155
effective search space: 30437882045
effective search space used: 30437882045
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)