Your job contains 1 sequence.
>018293
MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLK
DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS
HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI
LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT
AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS
RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSKPKKPQSVI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018293
(358 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2117169 - symbol:AT4G18900 "AT4G18900" species... 1096 5.3e-111 1
TAIR|locus:2122133 - symbol:AT4G35370 "AT4G35370" species... 710 7.8e-95 2
UNIPROTKB|G4MTU3 - symbol:MGG_04802 "Periodic tryptophan ... 764 8.1e-76 1
ASPGD|ASPL0000062261 - symbol:AN0310 species:162425 "Emer... 743 1.4e-73 1
POMBASE|SPBC1711.16 - symbol:SPBC1711.16 "WD repeat prote... 673 3.6e-66 1
DICTYBASE|DDB_G0275073 - symbol:pwp1 "periodic tryptophan... 655 2.9e-64 1
ZFIN|ZDB-GENE-040426-1049 - symbol:pwp1 "PWP1 homolog (S.... 611 1.3e-59 1
MGI|MGI:1914735 - symbol:Pwp1 "PWP1 homolog (S. cerevisia... 605 5.7e-59 1
UNIPROTKB|Q13610 - symbol:PWP1 "Periodic tryptophan prote... 603 9.3e-59 1
UNIPROTKB|Q2HJ56 - symbol:PWP1 "Periodic tryptophan prote... 601 1.5e-58 1
SGD|S000004186 - symbol:PWP1 "Protein with WD-40 repeats ... 476 4.8e-52 2
CGD|CAL0003692 - symbol:PWP1 species:5476 "Candida albica... 420 5.1e-45 2
UNIPROTKB|Q5AN12 - symbol:PWP1 "Putative uncharacterized ... 420 5.1e-45 2
FB|FBgn0263510 - symbol:nclb "no child left behind" speci... 344 2.6e-31 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 197 9.9e-14 1
WB|WBGene00011051 - symbol:pfs-2 species:6239 "Caenorhabd... 202 3.0e-13 1
DICTYBASE|DDB_G0276031 - symbol:DDB_G0276031 "WD40 repeat... 195 7.5e-13 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 179 1.2e-12 2
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 186 1.4e-12 2
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 192 1.7e-12 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 179 1.9e-12 2
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 179 1.9e-12 2
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 179 1.9e-12 2
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 179 1.9e-12 2
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 179 1.9e-12 2
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 179 1.9e-12 2
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 179 1.9e-12 2
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 179 1.9e-12 2
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 179 1.9e-12 2
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 179 1.9e-12 2
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 179 1.9e-12 2
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 188 2.5e-12 2
MGI|MGI:1914587 - symbol:Cstf1 "cleavage stimulation fact... 189 2.6e-12 2
RGD|1309267 - symbol:Cstf1 "cleavage stimulation factor, ... 189 2.6e-12 2
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 185 2.9e-12 2
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 185 2.9e-12 2
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 185 2.9e-12 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 197 3.3e-12 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 185 3.4e-12 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 188 3.7e-12 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 182 4.5e-12 2
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 184 4.5e-12 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 185 4.6e-12 2
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 185 4.6e-12 2
SGD|S000005261 - symbol:PFS2 "Subunit of the cleavage and... 188 4.6e-12 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 167 4.8e-12 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 194 5.1e-12 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 176 5.2e-12 2
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 185 6.0e-12 2
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 185 6.0e-12 2
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 185 6.0e-12 2
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 185 6.0e-12 2
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 182 7.1e-12 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 181 7.1e-12 2
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 180 7.6e-12 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 181 7.7e-12 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 185 7.9e-12 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 185 7.9e-12 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 182 7.9e-12 1
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 185 1.1e-11 2
RGD|1560053 - symbol:Tbl1xr1 "transducin (beta)-like 1 X-... 185 1.1e-11 2
ZFIN|ZDB-GENE-040426-2044 - symbol:cdc20 "cell division c... 184 1.5e-11 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 178 1.8e-11 2
UNIPROTKB|F1MFJ6 - symbol:TBL1XR1 "Uncharacterized protei... 185 2.2e-11 2
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 185 2.2e-11 2
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 185 2.2e-11 2
UNIPROTKB|Q05048 - symbol:CSTF1 "Cleavage stimulation fac... 181 2.5e-11 2
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 177 3.0e-11 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 176 3.9e-11 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 178 4.3e-11 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 181 4.4e-11 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 175 6.3e-11 1
FB|FBgn0263933 - symbol:ebi "ebi" species:7227 "Drosophil... 184 6.3e-11 2
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 179 6.3e-11 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 174 6.7e-11 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 174 6.7e-11 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 182 7.4e-11 1
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 177 1.1e-10 2
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 177 1.1e-10 2
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 172 1.2e-10 1
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 176 1.4e-10 1
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 176 1.4e-10 2
FB|FBgn0262699 - symbol:rap "retina aberrant in pattern" ... 175 1.5e-10 1
UNIPROTKB|Q32L05 - symbol:FZR1 "Uncharacterized protein" ... 175 1.6e-10 1
UNIPROTKB|Q5H7B9 - symbol:FZR1 "Uncharacterized protein" ... 175 1.6e-10 1
MGI|MGI:1926790 - symbol:Fzr1 "fizzy/cell division cycle ... 175 1.6e-10 1
UNIPROTKB|Q9UM11 - symbol:FZR1 "Fizzy-related protein hom... 175 1.6e-10 1
UNIPROTKB|E2R4Z3 - symbol:FZR1 "Uncharacterized protein" ... 175 1.6e-10 1
POMBASE|SPBC713.04c - symbol:SPBC713.04c "U3 snoRNP-assoc... 178 1.8e-10 1
ASPGD|ASPL0000009210 - symbol:AN4226 species:162425 "Emer... 173 2.1e-10 2
CGD|CAL0005164 - symbol:SOF1 species:5476 "Candida albica... 157 2.1e-10 2
UNIPROTKB|Q5A7Q9 - symbol:SOF1 "Putative uncharacterized ... 157 2.1e-10 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 169 2.3e-10 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 169 2.3e-10 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 170 2.4e-10 1
TAIR|locus:2037798 - symbol:PWP2 "AT1G15440" species:3702... 177 2.5e-10 1
FB|FBgn0027518 - symbol:CG7609 species:7227 "Drosophila m... 176 2.6e-10 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 169 3.1e-10 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 169 3.1e-10 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 169 3.1e-10 1
WARNING: Descriptions of 895 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2117169 [details] [associations]
symbol:AT4G18900 "AT4G18900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00537780
RefSeq:NP_567565.1 UniGene:At.50695 ProteinModelPortal:F4JSB9
SMR:F4JSB9 PRIDE:F4JSB9 EnsemblPlants:AT4G18900.1 GeneID:827624
KEGG:ath:AT4G18900 OMA:GFDVRQA PhylomeDB:F4JSB9 Uniprot:F4JSB9
Length = 461
Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
Identities = 208/352 (59%), Positives = 264/352 (75%)
Query: 3 INPNDAVIVCARNED-DVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKD 61
I P D VIVCA +D + + L+VY+ E++ G PN+Y HH+ IIPA PLC AWLDCPLK
Sbjct: 125 ILPTDLVIVCAMTDDKEANRLDVYVSEDTSHGSPNMYNHHYRIIPAIPLCTAWLDCPLKG 184
Query: 62 REKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXXXXXXX 120
E+GNF+AVGS P IEIWDLD ++ P V LGG ++E
Sbjct: 185 GERGNFLAVGSDGTPTIEIWDLDAWFDMLPCVQLGGQNKEGNYKQGS------------- 231
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT SVLGLAWNKEFRNILASASADK+VK+WDVA G C +T+EHHT +VQAVAWNH++P++
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
LLSGSFD++VV+KD R +HSGFKW+V +DVESLAWDPH+EHSFVVSLEDGT+KGFD+R
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQ 351
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
A ++ SFT++ HD+A ++SYN PNLLATGS D+ VKLWDLSNN+PSCIA+
Sbjct: 352 ASIS--ASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIAT 409
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF-SKYSKP 351
NP AG +F +AFS D+PF+LA+GG G+L++WDTLSD +S+R+ S+ +P
Sbjct: 410 HNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWDTLSDTNVSSRYGSREVRP 461
>TAIR|locus:2122133 [details] [associations]
symbol:AT4G35370 "AT4G35370" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00522472
RefSeq:NP_195263.4 UniGene:At.54614 ProteinModelPortal:F4JN04
SMR:F4JN04 PRIDE:F4JN04 EnsemblPlants:AT4G35370.1 GeneID:829690
KEGG:ath:AT4G35370 OMA:FRNIVAS Uniprot:F4JN04
Length = 433
Score = 710 (255.0 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
Identities = 133/208 (63%), Positives = 161/208 (77%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V+ LAWNKEFRNI+AS S DK+VK+WDVA GKC +T+EHH KV AVAWN+++P++
Sbjct: 215 HTGPVIDLAWNKEFRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEV 274
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
LLSGS DR+VV+KD R ++SG KW+ A VE LAWDPH+EHSFVVSL+DGT+KGFD R
Sbjct: 275 LLSGSRDRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRA 334
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
+ P SF +HAHD V +ISYN PNLLATGS D+ VKLWDLSNNQPS IA+
Sbjct: 335 SDLSP-------SFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQPSWIAT 387
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKG 328
P AG VFSV+FS D PF+LA+GGS+G
Sbjct: 388 NKPNAGEVFSVSFSADCPFLLAVGGSEG 415
Score = 253 (94.1 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
Identities = 45/85 (52%), Positives = 65/85 (76%)
Query: 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLK 60
+TI P D++I+CA + +V++LEVY+ EES+ N+Y+ + +II PLC AWLDCPLK
Sbjct: 120 LTIRPTDSLIICAAIKHEVNYLEVYVYEESE----NIYLRNDMIISELPLCTAWLDCPLK 175
Query: 61 DREKGNFMAVGSMEPAIEIWDLDVI 85
KGNF+A+G+ME +IEIWDLD++
Sbjct: 176 GGGKGNFVAIGTMESSIEIWDLDLV 200
Score = 112 (44.5 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 48/207 (23%), Positives = 88/207 (42%)
Query: 136 NILASASADKQVKIWDV-----AAGKCNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRS 189
N +A + + ++IWD+ A C ++ HT V +AWN I+ SGS D+
Sbjct: 181 NFVAIGTMESSIEIWDLDLVCTCATLCTTGTDNSHTGPVIDLAWNKEFRNIVASGSEDKK 240
Query: 190 VVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTS 249
V + D V ++AW+ + + D T+ D R DP ++
Sbjct: 241 VKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGR----DPSNSG 296
Query: 250 QQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL--SNNQPSCIASRNPKAGA 307
+ S + V ++++P + D VK +D S+ PS I +
Sbjct: 297 LKWST-----EAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSE-- 349
Query: 308 VFSVAFSEDSPFVLAIGGSKGKLEIWD 334
V S++++ +P +LA G + +++WD
Sbjct: 350 VSSISYNIHAPNLLATGSADESVKLWD 376
Score = 97 (39.2 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 29/103 (28%), Positives = 53/103 (51%)
Query: 255 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFS 314
T ++H V +++N N++A+GS DK VK+WD++ + C + V +VA++
Sbjct: 211 TDNSHTGPVIDLAWNKEFRNIVASGSEDKKVKVWDVATGK--CKVTMEHHEKKVHAVAWN 268
Query: 315 EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSKPKKPQSV 357
+P VL + GS+ + + D SN K+S K + +
Sbjct: 269 NYTPEVL-LSGSRDRTVVLKDGRDP--SNSGLKWSTEAKVEKL 308
>UNIPROTKB|G4MTU3 [details] [associations]
symbol:MGG_04802 "Periodic tryptophan protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043581
EMBL:CM001232 KO:K14791 RefSeq:XP_003713739.1
ProteinModelPortal:G4MTU3 EnsemblFungi:MGG_04802T0 GeneID:2677755
KEGG:mgr:MGG_04802 Uniprot:G4MTU3
Length = 551
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 155/353 (43%), Positives = 222/353 (62%)
Query: 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPL- 59
+ I D +++ A+ ED+++HLEVY+ E D D NLYVHH I++PA PLC+ WLD +
Sbjct: 152 LQILATDNLLLAAKVEDELAHLEVYVYE--DAAD-NLYVHHDIMLPAIPLCVEWLDIAVE 208
Query: 60 -KDREK---GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXX 115
KD K NF+A+G+M+P IEIWDLD ID + P+ ILG
Sbjct: 209 KKDTPKDAAANFVAIGTMDPDIEIWDLDTIDCMYPNAILGQGSNADEASGKKKKKKKSKK 268
Query: 116 XXXXXHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH 175
H D+VL LA N++ RN+LASASADK VK+WD+ KC + ++HTDKV +VAW+
Sbjct: 269 VNDEFHVDAVLALAANRKHRNLLASASADKTVKLWDLNTTKCAKSYKYHTDKVCSVAWHP 328
Query: 176 HSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235
+LLSGS+DR++V D R +W V +DVE++ WDPH + F VS E+G I
Sbjct: 329 VESTVLLSGSYDRTIVAADMRAPDAKVPRWGVESDVENVRWDPHDPNFFFVSTENGLIHY 388
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
+D+R A SDP +TS+ +++TL AHD+++ + NP++P + TGSTDK VKLW++ + P
Sbjct: 389 YDVRNAPSDP-ATSK-ATWTLQAHDESISSFDINPVIPGFMVTGSTDKTVKLWNIQESGP 446
Query: 296 SCIASRNPKAGAVFSVAFSEDSP--FVLAIGGSKGKLEIWDTLSDAGISNRFS 346
S I SRN G VFS +F+ D+ F L++ GSKG + +WDT ++ I F+
Sbjct: 447 SMIVSRNLDVGKVFSTSFAPDAEVGFRLSVAGSKGTVTVWDTSTNPAIRRAFA 499
>ASPGD|ASPL0000062261 [details] [associations]
symbol:AN0310 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000006 HOGENOM:HOG000212580 KO:K14791
OMA:RGVAKET OrthoDB:EOG4DNJCV RefSeq:XP_657914.1
ProteinModelPortal:Q5BGM0 STRING:Q5BGM0
EnsemblFungi:CADANIAT00002402 GeneID:2876087 KEGG:ani:AN0310.2
Uniprot:Q5BGM0
Length = 535
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 150/352 (42%), Positives = 215/352 (61%)
Query: 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPL- 59
+ I P D +++ + ED+V+HLEVY+ E D D NLYVHH I++PA PLC+ WLD P+
Sbjct: 142 LQILPTDNLLLAGKVEDEVAHLEVYVYE--DEAD-NLYVHHDIMLPAIPLCLEWLDFPVG 198
Query: 60 KDREKG----NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXX 115
K E G NF+AVG+MEP IE+WDLDV+D + P+ ILG +
Sbjct: 199 KSGENGGATGNFVAVGTMEPDIEVWDLDVVDSMYPNAILGQGGADADTDAKKPRKKKKVK 258
Query: 116 XXXXXHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH 175
H DSVL LA N++ RN+LAS SAD+ VK+WD+ K + HHTDKV ++ W+
Sbjct: 259 ANDEFHVDSVLALAANRQHRNLLASGSADRTVKLWDLNTAKSAKSYTHHTDKVCSLDWHP 318
Query: 176 HSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235
+LL+GS+DR++V D R + S +W V ADVE++ WD H + F + + G +
Sbjct: 319 KESTVLLTGSYDRTIVAADMR-APDSKARWGVDADVENVRWDIHDPNYFYATTDAGMVYR 377
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
+DIR + P + + ++L AHD +V + NP +P LATGSTDK VKLW++ N++P
Sbjct: 378 YDIRNVPATPKDS--KPVWSLQAHDSSVSSFDINPAIPGFLATGSTDKQVKLWNVENDKP 435
Query: 296 SCIASRNPKAGAVFSVAFSEDSP--FVLAIGGSKGKLEIWDTLSDAGISNRF 345
S + SR + G VFS F+ D+ F LA+ GSKG ++IWDT ++A + F
Sbjct: 436 SMVVSRKLEVGKVFSTTFAPDAEVGFRLAVAGSKGTVQIWDTSTNAAVRRAF 487
>POMBASE|SPBC1711.16 [details] [associations]
symbol:SPBC1711.16 "WD repeat protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0043234 "protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.16 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006364 HOGENOM:HOG000212580 KO:K14791
OMA:RGVAKET eggNOG:NOG290487 OrthoDB:EOG4DNJCV RefSeq:NP_595889.1
ProteinModelPortal:Q9P775 STRING:Q9P775 EnsemblFungi:SPBC1711.16.1
GeneID:2539789 KEGG:spo:SPBC1711.16 NextBio:20800938 Uniprot:Q9P775
Length = 516
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 135/350 (38%), Positives = 207/350 (59%)
Query: 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPL- 59
M I P D++++ AR ED++SH+EVY+ E ++ NLYVHH ++P FPLC+ WLD +
Sbjct: 139 MQILPTDSLLLAARTEDNLSHVEVYVYEPTE---ENLYVHHDFLLPTFPLCLEWLDYKVG 195
Query: 60 -KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXXXXX 118
D GN++AVG+ +P IEIWDLD+ID V P +LG
Sbjct: 196 TSDNAPGNYVAVGTFDPEIEIWDLDIIDAVYPAAVLGA-----GASQVNKKKKKSKKIND 250
Query: 119 XXHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSP 178
HTD+VL L+ N+ N+L S SAD +K+WD++ C + +H+DKV + W +P
Sbjct: 251 SYHTDAVLALSSNRNAHNLLVSGSADTTLKLWDLSTCNCVKSFTYHSDKVSCLDWYSKAP 310
Query: 179 QILLSGSFDRSVVMKDARIS-THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFD 237
+LLSGS+D++ + D R+ S F+ V +DVE++AWD H+E++F + ++G + D
Sbjct: 311 SVLLSGSYDKTAKIADLRLEEAPSSFQ--VTSDVENVAWDQHSENNFFIGTDNGIVYYCD 368
Query: 238 IRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC 297
R +S + L AHD + +S NP VP+ +ATGSTD++VKLW+ S++ P
Sbjct: 369 ARNLS--------KSVWQLQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTSDSSPKM 420
Query: 298 IASRNPKAGAVFSVAFSED--SPFVLAIGGSKGKLEIWDTLSDAGISNRF 345
+ SR+ G VF+ +F+ D + F LA GSKG + +WDT ++ G+ F
Sbjct: 421 VVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVRVWDTATNPGVRKAF 470
>DICTYBASE|DDB_G0275073 [details] [associations]
symbol:pwp1 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0275073 GO:GO:0005829 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0006364 KO:K14791
OMA:ICARNED RefSeq:XP_643788.1 ProteinModelPortal:Q869X0
STRING:Q869X0 EnsemblProtists:DDB0235359 GeneID:8619833
KEGG:ddi:DDB_G0275073 InParanoid:Q869X0 ProtClustDB:CLSZ2455247
Uniprot:Q869X0
Length = 569
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 141/365 (38%), Positives = 205/365 (56%)
Query: 3 INPNDAVIVCA--RNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PL 59
I P D+++V A EDD SHL++ + EE NLYVHH II+ ++PL +AW+D P+
Sbjct: 140 IRPTDSILVSAIVTGEDDYSHLDIMVYEEECD---NLYVHHDIILSSYPLALAWMDQNPI 196
Query: 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXX----XXXXXXXXXXX 115
+EKG+FMAVG+ EP+IEIWDLDV+D + P VILGG +E+
Sbjct: 197 NPQEKGSFMAVGTFEPSIEIWDLDVVDNLIPTVILGGKEEDSADPMKKPSAKKRGGKHNK 256
Query: 116 XXXXXHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH 175
H D V+ L+WN RN+LAS S+D VK+WD+ +C T HH DKV + WN
Sbjct: 257 FKEGSHRDGVMSLSWNSHQRNVLASGSSDNTVKVWDITTQQCLNTFTHHKDKVSCLHWNS 316
Query: 176 HSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235
H LL GS D+ V + D R + S +KW+V +VESL+W+PH F+V +DG +
Sbjct: 317 HEKTALLIGSHDKHVSILDVR-APDSAYKWSVKGEVESLSWNPHNPKEFIVGTDDGRLLC 375
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL--SNN 293
+D + S Q+S +V SY P ATGS+D VKLW+L S+N
Sbjct: 376 YDATLGTAAAPVWSVQAS-----QKGSVSCFSYCPGQVGFFATGSSDHTVKLWNLETSSN 430
Query: 294 QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSKPKK 353
+P+ I S+N +F+++F E+SPF+LA+G + + DT + N F ++P+
Sbjct: 431 KPTLIESKN-LGQEIFTLSFFENSPFLLAVGSETQRPNVIDTKRFISVQNSFG-IARPEN 488
Query: 354 PQSVI 358
+ +
Sbjct: 489 SKEPV 493
>ZFIN|ZDB-GENE-040426-1049 [details] [associations]
symbol:pwp1 "PWP1 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1049
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:11137 GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:CU571163 EMBL:BC049457 IPI:IPI00497637 RefSeq:NP_956586.1
UniGene:Dr.79178 STRING:Q7ZWE1 Ensembl:ENSDART00000003790
GeneID:393262 KEGG:dre:393262 InParanoid:Q7ZWE1 NextBio:20814321
Uniprot:Q7ZWE1
Length = 490
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 133/344 (38%), Positives = 193/344 (56%)
Query: 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKD 61
I P D +I+ R E + +LE+++ + +LYVHH I++PA+PLC+ WL+ P +
Sbjct: 142 IKPTDNLILAGRAEKECCNLEIHVYNSEED---SLYVHHDILLPAYPLCVEWLNFDPNPE 198
Query: 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXXXXXXXH 121
++GN+ AVG+M P I++WDLDV+D ++P LG E+ H
Sbjct: 199 EQQGNYAAVGNMTPVIDVWDLDVVDCLEPAFSLGSKKEKKKKKKAKKAAEPIEG-----H 253
Query: 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQIL 181
TD+VL L+WN+ RN+LASASAD+ V +WD+ GK TL HTDKVQ + ++ Q L
Sbjct: 254 TDAVLDLSWNRLVRNVLASASADETVILWDLEKGKPAATLAKHTDKVQTLKFHPFEAQTL 313
Query: 182 LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
+SGSFD+SV++ D R S W + VE + WD + +F+ S EDG I D A
Sbjct: 314 ISGSFDKSVILYDCRSPDDSHRIWRFSGQVERVTWDHFSPCNFLASTEDGFIYCLD---A 370
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR 301
+SD + FTL AHD V + + + L T S DK VK+WD+ N+P+ I SR
Sbjct: 371 RSD------KPVFTLRAHDGEVSGMDLSSQIRGCLVTCSADKHVKIWDILGNKPNLIHSR 424
Query: 302 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345
+ K G +F + D PFV A GG + L +WD A ++ F
Sbjct: 425 DMKMGVLFCGSCCPDLPFVYAFGGQREGLRVWDISDVAAVAEVF 468
>MGI|MGI:1914735 [details] [associations]
symbol:Pwp1 "PWP1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1914735 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:11137
GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:AK009972 EMBL:AK082158 EMBL:BC003199 EMBL:BC023137
IPI:IPI00320422 RefSeq:NP_598754.2 UniGene:Mm.18834
ProteinModelPortal:Q99LL5 SMR:Q99LL5 IntAct:Q99LL5 STRING:Q99LL5
PhosphoSite:Q99LL5 PaxDb:Q99LL5 PRIDE:Q99LL5
Ensembl:ENSMUST00000001836 GeneID:103136 KEGG:mmu:103136
UCSC:uc007gnc.2 InParanoid:Q99LL5 NextBio:355805 Bgee:Q99LL5
CleanEx:MM_PWP1 Genevestigator:Q99LL5 GermOnline:ENSMUSG00000001785
Uniprot:Q99LL5
Length = 501
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 125/346 (36%), Positives = 191/346 (55%)
Query: 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKD 61
I P D +IVC R E + +LEV++ + + + YVHH I++ A+PL + WL+ P D
Sbjct: 144 IKPTDNLIVCGRAEQEQCNLEVHVYNQEE---ESFYVHHDILLSAYPLSVEWLNFDPSPD 200
Query: 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXXXXXXXH 121
GN++AVG+M P IE+WDLD++D ++P LG H
Sbjct: 201 ASTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGS------KLSKKKKKKGKKSSSAEGH 254
Query: 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQIL 181
TD+VL L+WNK RN+LASASAD V +WD++ GK L HTDKVQ + ++ Q L
Sbjct: 255 TDAVLDLSWNKTVRNVLASASADSTVVLWDLSVGKSVARLTAHTDKVQTLQFHPFEAQTL 314
Query: 182 LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
+SGS+D+SV + D R + + +W + +E + W+ + F+ S +DG + D A
Sbjct: 315 ISGSYDKSVALYDCRDPSQNHRQWRFSGQIERVTWNHFSPCHFLASTDDGFVYNLD---A 371
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR 301
+SD + FTL+AH+ + + + + L T S DK VK+WD+ ++PS I SR
Sbjct: 372 RSD------KPIFTLNAHNDEISGLDLSSQIKGCLVTASADKFVKIWDILGDRPSLIHSR 425
Query: 302 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 347
+ K G +F + D PFV A GG K L +WD + + ++ F +
Sbjct: 426 DMKMGVLFCSSCCPDLPFVYAFGGQKEGLRVWDISTVSSVNEAFGR 471
>UNIPROTKB|Q13610 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471054 GO:GO:0006351 CTD:11137 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:L07758 EMBL:AK290681 IPI:IPI00014298 PIR:I39360
RefSeq:NP_008993.1 UniGene:Hs.506652 ProteinModelPortal:Q13610
SMR:Q13610 IntAct:Q13610 STRING:Q13610 PhosphoSite:Q13610
DMDM:2494897 PaxDb:Q13610 PeptideAtlas:Q13610 PRIDE:Q13610
DNASU:11137 Ensembl:ENST00000412830 GeneID:11137 KEGG:hsa:11137
UCSC:uc001tmo.1 GeneCards:GC12P108079 HGNC:HGNC:17015 HPA:HPA038707
neXtProt:NX_Q13610 PharmGKB:PA142671112 InParanoid:Q13610
PhylomeDB:Q13610 ChiTaRS:PWP1 GenomeRNAi:11137 NextBio:42336
ArrayExpress:Q13610 Bgee:Q13610 CleanEx:HS_PWP1
Genevestigator:Q13610 GermOnline:ENSG00000136045 Uniprot:Q13610
Length = 501
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 125/346 (36%), Positives = 191/346 (55%)
Query: 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKD 61
I P+D +IVC R E D +LEV++ + + + YVHH I++ A+PL + WL+ P D
Sbjct: 145 IKPSDNLIVCGRAEQDQCNLEVHVYNQEED---SFYVHHDILLSAYPLSVEWLNFDPSPD 201
Query: 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXXXXXXXH 121
GN++AVG+M P IE+WDLD++D ++P LG H
Sbjct: 202 DSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGS------KLSKKKKKKGKKSSSAEGH 255
Query: 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQIL 181
TD+VL L+WNK RN+LASASAD V +WD++ GK +L HTDKVQ + ++ Q L
Sbjct: 256 TDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTL 315
Query: 182 LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
+SGS+D+SV + D R S W + +E + W+ + F+ S +DG + D A
Sbjct: 316 ISGSYDKSVALYDCRSPDESHRMWRFSGQIERVTWNHFSPCHFLASTDDGFVYNLD---A 372
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR 301
+SD + FTL+AH+ + + + + L T S DK VK+WD+ ++PS + SR
Sbjct: 373 RSD------KPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRPSLVHSR 426
Query: 302 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 347
+ K G +F + D PF+ A GG K L +WD + + ++ F +
Sbjct: 427 DMKMGVLFCSSCCPDLPFIYAFGGQKEGLRVWDISTVSSVNEAFGR 472
>UNIPROTKB|Q2HJ56 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BC113302 IPI:IPI00691154 RefSeq:NP_001039631.1
UniGene:Bt.12659 ProteinModelPortal:Q2HJ56 STRING:Q2HJ56
PRIDE:Q2HJ56 Ensembl:ENSBTAT00000006109 GeneID:514147
KEGG:bta:514147 CTD:11137 GeneTree:ENSGT00390000017324
HOGENOM:HOG000212580 HOVERGEN:HBG001543 InParanoid:Q2HJ56 KO:K14791
OMA:RGVAKET OrthoDB:EOG4STS4J NextBio:20871193 Uniprot:Q2HJ56
Length = 500
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 125/346 (36%), Positives = 191/346 (55%)
Query: 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKD 61
I P+D +IVC R E D +LEV++ + + + YVHH I++ A+PL + WL+ P D
Sbjct: 144 IKPSDNLIVCGRAEQDQCNLEVHVYNQEED---SFYVHHDILLSAYPLSVEWLNFDPSPD 200
Query: 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXXXXXXXH 121
GN++AVG+M P IE+WDLD++D ++P LG H
Sbjct: 201 DSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGS------KLSKKKKKKGKKNSSADGH 254
Query: 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQIL 181
TD+VL L+WNK RN+LASASAD V +WD++ GK +L HTDKVQ + ++ Q L
Sbjct: 255 TDAVLDLSWNKLVRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTL 314
Query: 182 LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
+SGS+D+SV + D R S W + +E + W+ + F+ S +DG + D A
Sbjct: 315 ISGSYDKSVALYDCRSPEESHRMWRFSGQIERVTWNHFSPCHFLASTDDGFVYNLD---A 371
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR 301
+SD + FTL+AH+ + + + + L T S DK VK+WD+ ++PS + SR
Sbjct: 372 RSD------KPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRPSLVHSR 425
Query: 302 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 347
+ K G +F + D PF+ A GG K L +WD + + ++ F +
Sbjct: 426 DMKMGVLFCSSCCPDLPFIYAFGGQKEGLRVWDISTVSSVNEAFGR 471
>SGD|S000004186 [details] [associations]
symbol:PWP1 "Protein with WD-40 repeats involved in rRNA
processing" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA;IPI] [GO:0006364 "rRNA
processing" evidence=ISS;IMP] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004186 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BK006945 GO:GO:0006364 EMBL:U14913
GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580 KO:K14791
EMBL:M37578 PIR:S29367 RefSeq:NP_013297.1 ProteinModelPortal:P21304
SMR:P21304 DIP:DIP-4203N IntAct:P21304 MINT:MINT-503691
STRING:P21304 PaxDb:P21304 PeptideAtlas:P21304 EnsemblFungi:YLR196W
GeneID:850893 KEGG:sce:YLR196W CYGD:YLR196w eggNOG:NOG290487
OMA:ICARNED OrthoDB:EOG4DNJCV NextBio:967269 Genevestigator:P21304
GermOnline:YLR196W Uniprot:P21304
Length = 576
Score = 476 (172.6 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 111/331 (33%), Positives = 179/331 (54%)
Query: 34 DPNLYVHHHIIIPAFPLCMAWLDCPL--KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPH 91
DP LYVHH +++PAFPLC+ WLD + E N+ A+G+ +P IEIW+LD +D+ P
Sbjct: 194 DPALYVHHDLMLPAFPLCVEWLDYKVGSNSEEAANYAAIGTFDPQIEIWNLDCVDKAFPD 253
Query: 92 VILGG-IDEEXXXXXXXXXXXXXXXXXXXXH-TDSVLGLAWNKEFRNILASASADKQVKI 149
+ILG +D H TD+VL +A NK FR++LAS SAD VK+
Sbjct: 254 MILGEPLDNSMVSLKSKKKKKKSKTGHITTHHTDAVLSMAHNKYFRSVLASTSADHTVKL 313
Query: 150 WDVAAGKCNLTLEH-HTDK-VQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--W 205
WD+ +G +L H++K V + W+ + ILL+G +D V + D RIS S W
Sbjct: 314 WDLNSGNAARSLASIHSNKNVSSSEWHMLNGSILLTGGYDSRVALTDVRISDESQMSKYW 373
Query: 206 AVAA--DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAV 263
+ A ++E++ + +E+ + + G + FDIR ++ +++ +TL AHD +
Sbjct: 374 SAMAGEEIETVTFA--SENIILCGTDSGNVYSFDIR------NNENRKPVWTLKAHDAGI 425
Query: 264 CTISYNPLVPNLLATGST-DKMVKLW-----DLSNNQ-PSCIASRNPKAGAVFSVAFSED 316
T+ N +P +++TG+ +K VKLW D +N + PS + SR+ G V + +F+ D
Sbjct: 426 STLCSNKFIPGMMSTGAMGEKTVKLWKFPLDDATNTKGPSMVLSRDFDVGNVLTSSFAPD 485
Query: 317 SPFV--LAIGGSKGKLEIWDTLSDAGISNRF 345
+ IGG L++WD ++ + F
Sbjct: 486 IEVAGTMVIGGVNKVLKLWDVFTNRSVRKSF 516
Score = 81 (33.6 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 12/32 (37%), Positives = 24/32 (75%)
Query: 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDG 32
+ + P+D +++ AR EDDVS+L++Y+ ++ G
Sbjct: 138 LQVYPSDNLVLAARTEDDVSYLDIYVYDDGAG 169
>CGD|CAL0003692 [details] [associations]
symbol:PWP1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000005 KO:K14791 RefSeq:XP_722858.1
ProteinModelPortal:Q5AN12 STRING:Q5AN12 GeneID:3635456
KEGG:cal:CaO19.12110 CGD:CAL0068460 Uniprot:Q5AN12
Length = 612
Score = 420 (152.9 bits), Expect = 5.1e-45, Sum P(2) = 5.1e-45
Identities = 98/272 (36%), Positives = 145/272 (53%)
Query: 34 DPNLYVHHHIIIPAFPLCMAWLDC-PLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPH 91
+ NLYVHH I++PAFPLC+ W++ P ++ GNF A+G+ +P IE+W+LD +D+ P
Sbjct: 198 ESNLYVHHDIMLPAFPLCVEWINYKPGQESSNIGNFAAIGTFDPQIEVWNLDFVDKAFPD 257
Query: 92 VILGGIDEEXXXXXXXXXXXXXXXXX---XXXHTDSVLGLAWNKEFRNILASASADKQVK 148
VILG ++ H D+VL L+ NK R+ILAS SADK VK
Sbjct: 258 VILGEPNKNSFIAKKNKKSKKKKKGGQHITTHHVDAVLSLSHNKIHRSILASTSADKTVK 317
Query: 149 IWDV--AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-------T 199
+WD+ A C+ HH V + W+ ILL+G +D + + D RIS +
Sbjct: 318 LWDLNSATAVCSFDKIHHNKTVSSSQWHSQEASILLTGGYDSTAAVTDVRISASESSSSS 377
Query: 200 HSGFKWAVAA--DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH 257
S ++V A +VE++ WD F ++G + FDIR DS + +TLH
Sbjct: 378 DSSKHYSVVAGEEVENVRWDLSKPELFYAGTDNGNVYSFDIRQ-----DS---KPLWTLH 429
Query: 258 AHDKAVCTISYNPLVPNLLATGST-DKMVKLW 288
AHD + ++ N VP +L T + +K+VKLW
Sbjct: 430 AHDAGISSLDVNNYVPGMLITSAMGEKVVKLW 461
Score = 323 (118.8 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 86/254 (33%), Positives = 129/254 (50%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV--AAGKCNLTLEHHTDKVQAVAWNHHSP 178
H D+VL L+ NK R+ILAS SADK VK+WD+ A C+ HH V + W+
Sbjct: 290 HVDAVLSLSHNKIHRSILASTSADKTVKLWDLNSATAVCSFDKIHHNKTVSSSQWHSQEA 349
Query: 179 QILLSGSFDRSVVMKDARIS-------THSGFKWAVAA--DVESLAWDPHAEHSFVVSLE 229
ILL+G +D + + D RIS + S ++V A +VE++ WD F +
Sbjct: 350 SILLTGGYDSTAAVTDVRISASESSSSSDSSKHYSVVAGEEVENVRWDLSKPELFYAGTD 409
Query: 230 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-DKMVKLW 288
+G + FDIR DS + +TLHAHD + ++ N VP +L T + +K+VKLW
Sbjct: 410 NGNVYSFDIRQ-----DS---KPLWTLHAHDAGISSLDVNNYVPGMLITSAMGEKVVKLW 461
Query: 289 DL-----SNNQ-----PSCIASRNPKAGAVFSVAFSEDSPFV--LAIGGSKGKLEIWDTL 336
NN PS + SR+ G V + +++ D + IGG G L++WD
Sbjct: 462 KCPSSSDENNTTKKQGPSMVLSRDFGVGNVLTTSYAPDIEVAGNVVIGGITGGLKMWDAF 521
Query: 337 SDAGISNRFSKYSK 350
S++ + N F + K
Sbjct: 522 SNSSVRNGFREELK 535
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 30/96 (31%), Positives = 44/96 (45%)
Query: 255 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFS 314
T H H AV ++S+N + ++LA+ S DK VKLWDL++ C + V S +
Sbjct: 287 TTH-HVDAVLSLSHNKIHRSILASTSADKTVKLWDLNSATAVCSFDKIHHNKTVSSSQWH 345
Query: 315 EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSK 350
+L GG + D A S+ S SK
Sbjct: 346 SQEASILLTGGYDSTAAVTDVRISASESSSSSDSSK 381
Score = 72 (30.4 bits), Expect = 5.1e-45, Sum P(2) = 5.1e-45
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 3 INPNDAVIVCARNEDDVSHLEVYILEESDG 32
I P D +++ R EDD+S L++YI ++ G
Sbjct: 145 IYPTDNLVLATRTEDDISWLDIYIYDDGAG 174
>UNIPROTKB|Q5AN12 [details] [associations]
symbol:PWP1 "Putative uncharacterized protein PWP1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AACQ01000005 KO:K14791
RefSeq:XP_722858.1 ProteinModelPortal:Q5AN12 STRING:Q5AN12
GeneID:3635456 KEGG:cal:CaO19.12110 CGD:CAL0068460 Uniprot:Q5AN12
Length = 612
Score = 420 (152.9 bits), Expect = 5.1e-45, Sum P(2) = 5.1e-45
Identities = 98/272 (36%), Positives = 145/272 (53%)
Query: 34 DPNLYVHHHIIIPAFPLCMAWLDC-PLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPH 91
+ NLYVHH I++PAFPLC+ W++ P ++ GNF A+G+ +P IE+W+LD +D+ P
Sbjct: 198 ESNLYVHHDIMLPAFPLCVEWINYKPGQESSNIGNFAAIGTFDPQIEVWNLDFVDKAFPD 257
Query: 92 VILGGIDEEXXXXXXXXXXXXXXXXX---XXXHTDSVLGLAWNKEFRNILASASADKQVK 148
VILG ++ H D+VL L+ NK R+ILAS SADK VK
Sbjct: 258 VILGEPNKNSFIAKKNKKSKKKKKGGQHITTHHVDAVLSLSHNKIHRSILASTSADKTVK 317
Query: 149 IWDV--AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-------T 199
+WD+ A C+ HH V + W+ ILL+G +D + + D RIS +
Sbjct: 318 LWDLNSATAVCSFDKIHHNKTVSSSQWHSQEASILLTGGYDSTAAVTDVRISASESSSSS 377
Query: 200 HSGFKWAVAA--DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH 257
S ++V A +VE++ WD F ++G + FDIR DS + +TLH
Sbjct: 378 DSSKHYSVVAGEEVENVRWDLSKPELFYAGTDNGNVYSFDIRQ-----DS---KPLWTLH 429
Query: 258 AHDKAVCTISYNPLVPNLLATGST-DKMVKLW 288
AHD + ++ N VP +L T + +K+VKLW
Sbjct: 430 AHDAGISSLDVNNYVPGMLITSAMGEKVVKLW 461
Score = 323 (118.8 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 86/254 (33%), Positives = 129/254 (50%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV--AAGKCNLTLEHHTDKVQAVAWNHHSP 178
H D+VL L+ NK R+ILAS SADK VK+WD+ A C+ HH V + W+
Sbjct: 290 HVDAVLSLSHNKIHRSILASTSADKTVKLWDLNSATAVCSFDKIHHNKTVSSSQWHSQEA 349
Query: 179 QILLSGSFDRSVVMKDARIS-------THSGFKWAVAA--DVESLAWDPHAEHSFVVSLE 229
ILL+G +D + + D RIS + S ++V A +VE++ WD F +
Sbjct: 350 SILLTGGYDSTAAVTDVRISASESSSSSDSSKHYSVVAGEEVENVRWDLSKPELFYAGTD 409
Query: 230 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-DKMVKLW 288
+G + FDIR DS + +TLHAHD + ++ N VP +L T + +K+VKLW
Sbjct: 410 NGNVYSFDIRQ-----DS---KPLWTLHAHDAGISSLDVNNYVPGMLITSAMGEKVVKLW 461
Query: 289 DL-----SNNQ-----PSCIASRNPKAGAVFSVAFSEDSPFV--LAIGGSKGKLEIWDTL 336
NN PS + SR+ G V + +++ D + IGG G L++WD
Sbjct: 462 KCPSSSDENNTTKKQGPSMVLSRDFGVGNVLTTSYAPDIEVAGNVVIGGITGGLKMWDAF 521
Query: 337 SDAGISNRFSKYSK 350
S++ + N F + K
Sbjct: 522 SNSSVRNGFREELK 535
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 30/96 (31%), Positives = 44/96 (45%)
Query: 255 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFS 314
T H H AV ++S+N + ++LA+ S DK VKLWDL++ C + V S +
Sbjct: 287 TTH-HVDAVLSLSHNKIHRSILASTSADKTVKLWDLNSATAVCSFDKIHHNKTVSSSQWH 345
Query: 315 EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSK 350
+L GG + D A S+ S SK
Sbjct: 346 SQEASILLTGGYDSTAAVTDVRISASESSSSSDSSK 381
Score = 72 (30.4 bits), Expect = 5.1e-45, Sum P(2) = 5.1e-45
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 3 INPNDAVIVCARNEDDVSHLEVYILEESDG 32
I P D +++ R EDD+S L++YI ++ G
Sbjct: 145 IYPTDNLVLATRTEDDISWLDIYIYDDGAG 174
>FB|FBgn0263510 [details] [associations]
symbol:nclb "no child left behind" species:7227 "Drosophila
melanogaster" [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0030723 "ovarian fusome
organization" evidence=IMP] [GO:0008584 "male gonad development"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IMP]
[GO:0036098 "male germ-line stem cell maintenance" evidence=IMP]
[GO:0036099 "female germ-line stem cell maintenance" evidence=IMP]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0035327 "transcriptionally active chromatin" evidence=IDA]
[GO:0030707 "ovarian follicle cell development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030707 eggNOG:COG2319
GO:GO:0008584 GO:GO:0007281 GO:GO:0010468 GO:GO:0031490
GO:GO:0030723 GeneTree:ENSGT00390000017324 KO:K14791 OMA:RGVAKET
RefSeq:NP_610623.1 UniGene:Dm.30901 ProteinModelPortal:A1Z8D0
SMR:A1Z8D0 STRING:A1Z8D0 PaxDb:A1Z8D0 PRIDE:A1Z8D0
EnsemblMetazoa:FBtr0088228 GeneID:36150 KEGG:dme:Dmel_CG6751
UCSC:CG6751-RA CTD:36150 FlyBase:FBgn0263510 InParanoid:A1Z8D0
OrthoDB:EOG4K98TT PhylomeDB:A1Z8D0 GenomeRNAi:36150 NextBio:797092
Bgee:A1Z8D0 GO:GO:0036098 Uniprot:A1Z8D0
Length = 459
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 74/241 (30%), Positives = 122/241 (50%)
Query: 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDR 62
I P+D +I+ +DD + +EV++ + + LY HH ++P+FPLC+ W++
Sbjct: 130 IKPSDNLILVGHVQDDAASMEVWVFNQEEEA---LYTHHDFLLPSFPLCIEWMNHDAGSE 186
Query: 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXXXXXXXHT 122
+ GN A+G M+P I +WDLD+ D ++P LG H
Sbjct: 187 KAGNMCAIGCMDPIITVWDLDIQDAIEPTFKLGS------------KGSRKQNKEQYGHK 234
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D+VL L+WN F +ILAS S D+ V +WD+ G+ + T+ ++Q++ ++ Q +L
Sbjct: 235 DAVLDLSWNTNFEHILASGSVDQTVILWDMDEGQPHTTITAFGKQIQSLEFHPQEAQSIL 294
Query: 183 SGSFDRSVVMKDARIS---THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+G D V + D R + S +W V +VE + W P F+V DGT+ D R
Sbjct: 295 TGCADGYVRLFDCRDAEGVNSSSIEWKVDGEVEKVLWHPTQTDYFIVGTNDGTLHYADKR 354
Query: 240 T 240
+
Sbjct: 355 S 355
Score = 261 (96.9 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 61/210 (29%), Positives = 104/210 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D+VL L+WN F +ILAS S D+ V +WD+ G+ + T+ ++Q++ ++ Q
Sbjct: 233 HKDAVLDLSWNTNFEHILASGSVDQTVILWDMDEGQPHTTITAFGKQIQSLEFHPQEAQS 292
Query: 181 LLSGSFDRSVVMKDARIS---THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFD 237
+L+G D V + D R + S +W V +VE + W P F+V DGT+ D
Sbjct: 293 ILTGCADGYVRLFDCRDAEGVNSSSIEWKVDGEVEKVLWHPTQTDYFIVGTNDGTLHYAD 352
Query: 238 IRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC 297
K P Q +++ AH++ + + +N PNLL + ST+ +K+W+ +
Sbjct: 353 ----KRSPG----QLLWSVKAHNEEISGVCFNNQKPNLLTSTSTEGTLKVWNFDGTEAKH 404
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSK 327
+ G + + + P+ LA GG K
Sbjct: 405 VYEHEFNMGRLQCMRQCPEDPYTLAFGGEK 434
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 43/188 (22%), Positives = 78/188 (41%)
Query: 148 KIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA-RISTHSGFKWA 206
K+ + K N H D V ++WN + IL SGS D++V++ D H+ A
Sbjct: 217 KLGSKGSRKQNKEQYGHKDAVLDLSWNTNFEHILASGSVDQTVILWDMDEGQPHTTIT-A 275
Query: 207 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 266
++SL + P S + DG ++ FD R A+ S+ + D V +
Sbjct: 276 FGKQIQSLEFHPQEAQSILTGCADGYVRLFDCRDAEGVNSSSIEWKV------DGEVEKV 329
Query: 267 SYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS 326
++P + G+ D + D + + S + V F+ P +L +
Sbjct: 330 LWHPTQTDYFIVGTNDGTLHYAD-KRSPGQLLWSVKAHNEEISGVCFNNQKPNLLTSTST 388
Query: 327 KGKLEIWD 334
+G L++W+
Sbjct: 389 EGTLKVWN 396
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 197 (74.4 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 60/216 (27%), Positives = 99/216 (45%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAA---GKCNLTLEHHTDKVQAVAWNHHSPQ 179
D + W++E +AS+S D +KIWD A G+ + E HT +V +V WN +
Sbjct: 59 DGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKD 118
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
++GS+D+S+ + + R+ + S W P H F D T+K +D R
Sbjct: 119 TFITGSWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSR 178
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCI 298
D+ S T+ AHD + T +N + TGS DK +++WD+ ++P+ I
Sbjct: 179 ------DNRSLN---TIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTI 229
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ A V + S S +LA + +WD
Sbjct: 230 LRGHTYA--VRRIKCSPHSESMLASCSYDMSVIVWD 263
Score = 153 (58.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 49/181 (27%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V + WN ++ + S D+ +KIW+ + T H + + W+ + +
Sbjct: 103 HTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHL 162
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLA--WDPHAEHSFVVSLEDGTIKGFDI 238
S S DR++ + D+R + A D E L W+ + + V D TI+ +DI
Sbjct: 163 FASVSGDRTLKIWDSR--DNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDI 220
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298
R PD + + L H AV I +P ++LA+ S D V +WD + Q I
Sbjct: 221 RY----PD----RPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAREQDPII 272
Query: 299 A 299
A
Sbjct: 273 A 273
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 38/171 (22%), Positives = 75/171 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + W+ ++ AS S D+ +KIWD + T++ H ++ WN ++ +
Sbjct: 146 HRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKE 205
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+++GS D+++ + D R + V + PH+E D ++ +D R
Sbjct: 206 VVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWD-R 264
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
+ DP H H + V + +N + +A+ S D+ V +W+L
Sbjct: 265 AREQDPIIARMD-----H-HTEFVVGLDWNMFIDGQMASCSWDEQVCVWNL 309
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 202 (76.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 60/177 (33%), Positives = 87/177 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQ--VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSP 178
H V + W+ + ++A+ S D Q VKIWD +G C TL+ H V AV +N +
Sbjct: 258 HGAEVRCIDWHPT-KGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNG- 315
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
LL+G D V M D R+ A +V SLAW P E FV DG+I + +
Sbjct: 316 NWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMV 375
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
K + HAHD+A+ ++ ++PL ++LATGS D K W + N+P
Sbjct: 376 DGEK--------EIGLLEHAHDQAIWSMKWHPL-GHILATGSNDNNTKFW--ARNRP 421
Score = 137 (53.3 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 51/214 (23%), Positives = 100/214 (46%)
Query: 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSG 184
V + W+ E + ++ + +W+ A L+ H ++A+ W + Q LLS
Sbjct: 136 VYSVCWSPEGKRLITGCQTG-EFTLWNGTAFNFETILQAHDSAIRALKWASNE-QWLLSA 193
Query: 185 SFDRSVVMKDARISTHSGFKWAVAAD--VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAK 242
D+ +K + + ++ ++ D + LA+ P + F + +DGT + +D A+
Sbjct: 194 --DQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAP-TDVKFATASDDGTARVWDF--AR 248
Query: 243 SDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM--VKLWDLSNNQPSCIAS 300
T ++ L H V I ++P L+ATGS D VK+WD + SC+A+
Sbjct: 249 Y----TEER---VLRGHGAEVRCIDWHP-TKGLIATGSRDTQQPVKIWDPKSG--SCLAT 298
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+V +V F+++ ++L GG ++++D
Sbjct: 299 LQEHKSSVMAVEFNKNGNWLLT-GGRDHLVKMYD 331
>DICTYBASE|DDB_G0276031 [details] [associations]
symbol:DDB_G0276031 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276031
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000014 EMBL:X16524 PIR:S05357 RefSeq:XP_643326.1
ProteinModelPortal:P14197 STRING:P14197 EnsemblProtists:DDB0185151
GeneID:8620373 GenomeReviews:CM000151_GR KEGG:ddi:DDB_G0276031
KO:K12880 OMA:YAPEINE ProtClustDB:CLSZ2430924 Uniprot:P14197
Length = 478
Score = 195 (73.7 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 57/215 (26%), Positives = 106/215 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H S+ ++W+ + ++LASA DK +KIWDV GKC T+ +++ + V W+ Q
Sbjct: 227 HDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGTVSTNSENID-VRWSPDG-QF 284
Query: 181 LLSGSFDRSVVMKDA-RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+++ + D + + D I T +K+ ++ + WD + + +++ G I+ +
Sbjct: 285 IVACTRDDHLALIDLPTIKTLKIYKFN-GEELNQVGWDNNGD-LILMANSMGNIEAY--- 339
Query: 240 TAKSDPDSTSQQSSF-TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298
K P ST+ TL+ H ++ + ++P LA GS D +V LWD+ + C+
Sbjct: 340 --KFLPKSTTHVKHLKTLYGHTASIYCMEFDP-TGKYLAAGSADSIVSLWDIEDMM--CV 394
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+ SV+FS D F+ A + +EI+
Sbjct: 395 KTFIKSTFPCRSVSFSFDGQFIAA-SSFESTIEIF 428
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 179 (68.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 129 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIF 188
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 189 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 242
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 243 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 301
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 302 GTDRRLNVWD-LSKIG 316
Score = 163 (62.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 191 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 250
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 251 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 308
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 309 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 368
Query: 290 LSNN 293
++ N
Sbjct: 369 MAEN 372
Score = 157 (60.3 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 141 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 200
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 201 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 260
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 261 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 312
Query: 291 S 291
S
Sbjct: 313 S 313
Score = 51 (23.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 42 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 82
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 186 (70.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 60/176 (34%), Positives = 94/176 (53%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHHSP 178
H+ ++ +AW+ LASAS D V IWD +G+ CN TLE H ++V++V+W+ S
Sbjct: 59 HSRTIRDVAWSP-CGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSK-SG 116
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAVAA-----DVESLAWDPHAEHSFVVSLEDGTI 233
+L + S D+SV + + ++ ++ A DV+ + W PH E + D TI
Sbjct: 117 SLLATCSRDKSVWVWE--VAQEDEYECAAVLNTHTQDVKKVEWHPH-EDILASASYDNTI 173
Query: 234 KGFDIRTAKSDPDSTSQQSSF-TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
K + A SD SSF TL +H+ V +IS++ N LA+ S D+ VK+W
Sbjct: 174 KLYKEDLADSD------WSSFDTLVSHESTVWSISFDGS-GNRLASCSDDQTVKIW 222
Score = 38 (18.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 64 KGNFMAVGSMEPAIEIWDLD 83
KGN +A + I IW D
Sbjct: 25 KGNVLATCGEDKTIRIWAED 44
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 192 (72.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/234 (24%), Positives = 102/234 (43%)
Query: 76 AIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXXXXXXXHTDSVLGLAWNKEFR 135
+IE + LD ++ + G + HT+SV + W+
Sbjct: 250 SIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSEE 309
Query: 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
+ AS S D+ V+IWD+ K +T++ HT V ++W+ + +L+SG D S + D
Sbjct: 310 KVFASCSIDQTVRIWDIRKPKPAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDL 369
Query: 196 RI----STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIR-------TAK 242
R S S FK+ + S+ W+P+ E +VS D TI F + A
Sbjct: 370 RAFKDNSPVSDFKYHTGP-ITSIEWNPYEESQVIVSSSDDQVTIWDFSLEEDTEEFTNAN 428
Query: 243 SDPDSTSQQSS--FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
++PD Q F +H + + ++P +P++ + S D ++ SN++
Sbjct: 429 ANPDDDFQYPPQLFFIHQGQHDIKEVHWHPQIPHVAISTSIDGF-NIFKSSNSE 481
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 157 (60.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 188 (71.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 162 SGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIF 221
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S ++ AH V
Sbjct: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHSVDAHTAEVN 275
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 276 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVHWSPHNETILASS 334
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 335 GTDRRLNVWD-LSKIG 349
Score = 166 (63.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 49/181 (27%), Positives = 85/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN + L SAS D V +WD++AG H+ V+ VAW
Sbjct: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S +V A+V L+++P++E D
Sbjct: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 294 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 345
Query: 291 S 291
S
Sbjct: 346 S 346
Score = 162 (62.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 224 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 283
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 284 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 341
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 342 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 401
Query: 290 LSNN 293
++ N
Sbjct: 402 MAEN 405
Score = 39 (18.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 61 DREKGNFMAVGSMEPAIE 78
D EKG F GS+ IE
Sbjct: 97 DSEKGEFGGFGSVTGKIE 114
>MGI|MGI:1914587 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA,
subunit 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1914587 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144
KO:K14406 OMA:LYDHTDE OrthoDB:EOG4868CD EMBL:AK011943 EMBL:AK050686
EMBL:AK078667 EMBL:AK145001 EMBL:BC003440 IPI:IPI00116747
RefSeq:NP_077161.1 UniGene:Mm.26944 ProteinModelPortal:Q99LC2
SMR:Q99LC2 STRING:Q99LC2 PhosphoSite:Q99LC2 PaxDb:Q99LC2
PRIDE:Q99LC2 DNASU:67337 Ensembl:ENSMUST00000116375 GeneID:67337
KEGG:mmu:67337 GeneTree:ENSGT00700000104487 InParanoid:Q99LC2
NextBio:324286 Bgee:Q99LC2 Genevestigator:Q99LC2
GermOnline:ENSMUSG00000027498 Uniprot:Q99LC2
Length = 431
Score = 189 (71.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 55/179 (30%), Positives = 94/179 (52%)
Query: 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD-ARISTHSGFKWAVAADV-ESLAWD 217
TL H D+V +A+ H + QIL SGS D ++ + D ++ S FK+ A++ S+++
Sbjct: 168 TLYDHVDEVTCLAF-HPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFH 226
Query: 218 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 277
P + +V + T++ +DI T + Q H A+C+++YNP N+
Sbjct: 227 PSGDF-ILVGTQHPTLRLYDINTFQCFVSCNPQDQ------HTDAICSVNYNPSA-NMYV 278
Query: 278 TGSTDKMVKLWDLSNNQPSCIAS-RNPKAGA-VFSVAFSEDSPFVLAIGGSKGKLEIWD 334
TGS D +KLWD +N+ CI + GA V S FS++S ++L+ G ++W+
Sbjct: 279 TGSKDGCIKLWDGVSNR--CITTFEKAHDGAEVCSAIFSKNSKYILS-SGKDSVAKLWE 334
Score = 38 (18.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 137 ILASASADKQVKIWD 151
++A+ SAD +KI D
Sbjct: 122 LIATGSADASIKILD 136
>RGD|1309267 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA, subunit
1, 50kDa" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309267 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397
CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144 KO:K14406
OMA:LYDHTDE OrthoDB:EOG4868CD GeneTree:ENSGT00700000104487
EMBL:BC091381 IPI:IPI00365055 RefSeq:NP_001013179.1 UniGene:Rn.8860
ProteinModelPortal:Q5BJQ6 SMR:Q5BJQ6 STRING:Q5BJQ6 PRIDE:Q5BJQ6
Ensembl:ENSRNOT00000055101 GeneID:311670 KEGG:rno:311670
InParanoid:Q5BJQ6 NextBio:664016 Genevestigator:Q5BJQ6
GermOnline:ENSRNOG00000004775 Uniprot:Q5BJQ6
Length = 431
Score = 189 (71.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 55/179 (30%), Positives = 94/179 (52%)
Query: 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD-ARISTHSGFKWAVAADV-ESLAWD 217
TL H D+V +A+ H + QIL SGS D ++ + D ++ S FK+ A++ S+++
Sbjct: 168 TLYDHVDEVTCLAF-HPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFH 226
Query: 218 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 277
P + +V + T++ +DI T + Q H A+C+++YNP N+
Sbjct: 227 PSGDF-ILVGTQHPTLRLYDINTFQCFVSCNPQDQ------HTDAICSVNYNPSA-NMYV 278
Query: 278 TGSTDKMVKLWDLSNNQPSCIAS-RNPKAGA-VFSVAFSEDSPFVLAIGGSKGKLEIWD 334
TGS D +KLWD +N+ CI + GA V S FS++S ++L+ G ++W+
Sbjct: 279 TGSKDGCIKLWDGVSNR--CITTFEKAHDGAEVCSAIFSKNSKYILS-SGKDSVAKLWE 334
Score = 38 (18.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 137 ILASASADKQVKIWD 151
++A+ SAD +KI D
Sbjct: 122 LIATGSADASIKILD 136
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 185 (70.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 222
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 335
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 GTDRRLNVWD-LSKIG 350
Score = 159 (61.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Query: 291 S 291
S
Sbjct: 347 S 347
Score = 157 (60.3 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 290 LSNN 293
++ N
Sbjct: 403 MAEN 406
Score = 42 (19.8 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D EKG F GS+ IE
Sbjct: 76 NHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIE 115
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 185 (70.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 222
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 335
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 GTDRRLNVWD-LSKIG 350
Score = 159 (61.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Query: 291 S 291
S
Sbjct: 347 S 347
Score = 157 (60.3 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 290 LSNN 293
++ N
Sbjct: 403 MAEN 406
Score = 42 (19.8 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D EKG F GS+ IE
Sbjct: 76 NHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIE 115
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 185 (70.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 222
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 335
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 GTDRRLNVWD-LSKIG 350
Score = 159 (61.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Query: 291 S 291
S
Sbjct: 347 S 347
Score = 157 (60.3 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 290 LSNN 293
++ N
Sbjct: 403 MAEN 406
Score = 42 (19.8 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D EKG F GS+ IE
Sbjct: 76 NHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIE 115
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 197 (74.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 72/220 (32%), Positives = 104/220 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + V + ++ + R +LASAS D VKIWD A G L+ H D V++V ++H S ++
Sbjct: 304 HNEWVKSVVFSHDSR-LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDS-RL 361
Query: 181 LLSGSFDRSVVMKDARI-STHSGFKWAVAADVESLAWDPHAEHSF--VVSLEDG-TIKGF 236
+ SGS DR+V RI T +G D E H + S DG +K +
Sbjct: 362 IASGSNDRTV-----RIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIW 416
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ-P 295
D RT S Q+ L HD V ++S++P LLA+ S D+ VK+W +
Sbjct: 417 DTRTG-------SLQN--VLEGHDDCVNSVSFSP-DSRLLASASDDRTVKIWHAATGSLQ 466
Query: 296 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
+ N V SV FS DS + A ++IWDT
Sbjct: 467 RTLEGHNDW---VRSVVFSHDSRLI-ASASDDMTVKIWDT 502
Score = 193 (73.0 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 67/216 (31%), Positives = 107/216 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D V ++++ + R +LASAS D+ VKIW A G TLE H D V++V ++H S ++
Sbjct: 430 HDDCVNSVSFSPDSR-LLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDS-RL 487
Query: 181 LLSGSFDRSVVMKD-ARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ S S D +V + D A + + + + V S+ + H + +D T+K +D
Sbjct: 488 IASASDDMTVKIWDTATVPLQNNLE-SHDNWVRSVVFS-HDSRLLASASDDMTVKIWDTA 545
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
T + TL HD V ++S++P LLA+ S D VK+W + +
Sbjct: 546 TGSLEN---------TLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIWYAATGT---VQ 592
Query: 300 SRNPKAGAV-FSVAFSEDSPFVLAIGGSKGKLEIWD 334
+G V S+AFS S +LA G ++IWD
Sbjct: 593 HTFDGSGRVAISLAFSHTSN-LLASAMDDGTVKIWD 627
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 58/213 (27%), Positives = 94/213 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H +V ++++ + R +LASAS D VKIWD A TLE H + V++V ++H S ++
Sbjct: 262 HDRAVGSVSFSHDSR-LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS-RL 319
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L S S D +V + D T V S+ + H D T++ ++
Sbjct: 320 LASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS-HDSRLIASGSNDRTVRIWE--- 375
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
+T+ T H+ +V +S+ LA+ S VK+WD +
Sbjct: 376 ------TTTGLLRHTFEDHEDSVMAVSFAH-DSRRLASASDGGNVKIWDTRTGSLQNVLE 428
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+ V SV+FS DS +LA ++IW
Sbjct: 429 GHDDC--VNSVSFSPDSR-LLASASDDRTVKIW 458
Score = 142 (55.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D V + ++ + R ++ASAS D VKIWD A LE H + V++V ++H S ++
Sbjct: 472 HNDWVRSVVFSHDSR-LIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDS-RL 529
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L S S D +V + D + V S+++ P + S +DGT+K + T
Sbjct: 530 LASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASAS-DDGTVKIWYAAT 588
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T Q T + +++++ NLLA+ D VK+WD+
Sbjct: 589 G------TVQH---TFDGSGRVAISLAFSH-TSNLLASAMDDGTVKIWDM 628
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 185 (70.2 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 49/176 (27%), Positives = 79/176 (44%)
Query: 121 HTDSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
HT + W++ ++ S S D+ K+WD A GK T + H + + W+ H P
Sbjct: 108 HTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPG 167
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
S S D+++ + D + A A++ S W + E+ V D ++KG+D+R
Sbjct: 168 CFASASGDQTLRIWDVKAPGVRLVIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLR 227
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
+ Q F L H AV + ++P LLA+ S D V+ WD S P
Sbjct: 228 NVR--------QPVFILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFSKPNP 275
Score = 180 (68.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 57/216 (26%), Positives = 97/216 (44%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL-EHHTDKVQAVAWNH-HSPQI 180
D + + W++ ++L ++S D ++IWD+A K L + + HT + +V W+ Q+
Sbjct: 66 DGLFDVTWSENNEHVLITSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQL 125
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
++SGS+D++ + D + FK + S W PH F + D T++ +D++
Sbjct: 126 VVSGSWDQTAKLWDPAVGKSLRTFKGHEGV-IYSTIWSPHIPGCFASASGDQTLRIWDVK 184
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCI 298
P + AH + + + NLL TG+ D +K WDL N QP I
Sbjct: 185 A----PGVR-----LVIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLRNVRQPVFI 235
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ A V V FS +LA + WD
Sbjct: 236 LLGHTYA--VRRVKFSPFHATLLASCSYDFTVRFWD 269
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 188 (71.2 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 72/226 (31%), Positives = 106/226 (46%)
Query: 136 NILASASADKQVKIWDVAA--------GKC--NLTLEHHTDKVQAVAWNHHSPQILLSGS 185
+I+A+ + +V I+D GKC NL L H + ++WN LLS S
Sbjct: 135 SIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGHLLSCS 194
Query: 186 FDRSVVMKDARISTHSGFKWAV-------AADVESLAWDPHAEH-SFVVSL-EDGTIKGF 236
D+S+ M D ++ S + VE +AW H H +F S+ +D + +
Sbjct: 195 DDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAW--HYIHDTFFGSVGDDKKLMIW 252
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN--NQ 294
D RT + P + AH+ V +S+NP L+ATGSTDK V LWD+ N N+
Sbjct: 253 DTRTG-TKP-------IHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNR 304
Query: 295 PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340
+ S + VF V FS + VLA GS ++ +WD LS G
Sbjct: 305 LHSLISHTDE---VFQVQFSPHNETVLASCGSDRRVNVWD-LSRIG 346
Score = 150 (57.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 56/233 (24%), Positives = 99/233 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV-AAGKCNLTLEH------HTDKVQAVAW 173
H G++WN L S S D+ + +WD+ AA K + TL+ HT V+ VAW
Sbjct: 173 HKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAW 232
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAVAADVESLAWDPHAEHSFVVSLEDGT 232
++ S D+ +++ D R T A ++V L+++P E D T
Sbjct: 233 HYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKT 292
Query: 233 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS- 291
+ +D+R + S L +H V + ++P +LA+ +D+ V +WDLS
Sbjct: 293 VALWDMRNLGNRLHS--------LISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSR 344
Query: 292 -----NNQ------PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
NN+ P + + +++ + P+ +A L+IW
Sbjct: 345 IGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIW 397
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 40/180 (22%), Positives = 79/180 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQ 179
HT V +AW+ S DK++ IWD G + +E H +V +++N
Sbjct: 223 HTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEF 282
Query: 180 ILLSGSFDRSVVMKDAR-ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFD- 237
++ +GS D++V + D R + + +V + + PH E D + +D
Sbjct: 283 LVATGSTDKTVALWDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDL 342
Query: 238 --IRTAKSDPDSTSQQSSFT-LHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293
I +++ D+ +H H + S+NP P +A+ + D ++++W ++ N
Sbjct: 343 SRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIWQMAEN 402
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 182 (69.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 60/196 (30%), Positives = 93/196 (47%)
Query: 154 AGKC--NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+C +L L H + ++WN + LLS S D ++ + K+ R+
Sbjct: 168 SGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIF 227
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE +AW E F +D + +D R ++TS+ S T+ AH V
Sbjct: 228 TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN-----NNTSKPSH-TVDAHTAEVN 281
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 340
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 341 GTDRRLHVWD-LSKIG 355
Score = 169 (64.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 46/184 (25%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVA---AGKCNLTLEHHTDKVQAVAWNHHS 177
HT V +AW+ ++ S + D+++ IWD K + T++ HT +V +++N +S
Sbjct: 230 HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS 289
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 290 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLH 347
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407
Query: 290 LSNN 293
++ N
Sbjct: 408 MAEN 411
Score = 153 (58.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV-AAGKCNLTLEH------HTDKVQAVAW 173
H GL+WN L SAS D + +WD+ A K + ++ HT V+ VAW
Sbjct: 180 HQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAW 239
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S V A+V L+++P++E D
Sbjct: 240 HLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD 299
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 300 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 351
Query: 291 S 291
S
Sbjct: 352 S 352
Score = 44 (20.5 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPAFPLCM--AWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + L A D D EKG F GS+ IEI
Sbjct: 81 NHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEI 121
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 184 (69.8 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 47/176 (26%), Positives = 81/176 (46%)
Query: 121 HTDSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
HT V + W++ ++ S S D+ VK+WD GK T H + + W+ H P
Sbjct: 110 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPG 169
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
S S D+++ + D + + A A++ S W + E+ V D +++G+D+R
Sbjct: 170 CFASSSGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLR 229
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
QQ F L H A+ + ++P ++LA+ S D V+ W+ S P
Sbjct: 230 NV--------QQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDP 277
Score = 173 (66.0 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 46/177 (25%), Positives = 86/177 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL-EHHTDKVQAVAWNH-HSPQI 180
D + + W++ ++L + S D +++WD A L + + HT +V +V W+ Q+
Sbjct: 68 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTARATGPLQVFKEHTQEVYSVDWSQTRGEQL 127
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
++SGS+D++V + D + F+ + + S W PH F S D T++ +D++
Sbjct: 128 VVSGSWDQTVKLWDPTVGKSLCTFRGHESV-IYSTIWSPHIPGCFASSSGDQTLRIWDVK 186
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQP 295
T T + + AH + + + NL+ TG+ D ++ WDL N QP
Sbjct: 187 T-------TGVR--IVVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVQQP 234
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 185 (70.2 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 207 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 266
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 267 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 320
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 321 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 379
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 380 GTDRRLNVWD-LSKIG 394
Score = 159 (61.0 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 219 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 278
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 279 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 338
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 339 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 390
Query: 291 S 291
S
Sbjct: 391 S 391
Score = 157 (60.3 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 269 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 328
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 329 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 386
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 387 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 446
Query: 290 LSNN 293
++ N
Sbjct: 447 MAEN 450
Score = 42 (19.8 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D EKG F GS+ IE
Sbjct: 120 NHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIE 159
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 185 (70.2 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 207 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 266
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 267 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 320
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 321 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 379
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 380 GTDRRLNVWD-LSKIG 394
Score = 159 (61.0 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 219 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 278
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 279 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 338
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 339 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 390
Query: 291 S 291
S
Sbjct: 391 S 391
Score = 157 (60.3 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 269 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 328
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 329 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 386
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 387 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 446
Query: 290 LSNN 293
++ N
Sbjct: 447 MAEN 450
Score = 42 (19.8 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D EKG F GS+ IE
Sbjct: 120 NHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIE 159
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 188 (71.2 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 50/168 (29%), Positives = 81/168 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D V W+ E ++ASAS D VK+WD +G C ++ V + +
Sbjct: 219 HWD-VKSCDWHPEM-GLIASASKDNLVKLWDPRSGNCISSILKFKHTVLKTRFQPTKGNL 276
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L++ S D+S + D R S D +L W P E F ++ DG++K FD+
Sbjct: 277 LMAISKDKSCRVFDIRYSMKELMCVRDETDYMTLEWHPINESMFTLACYDGSLKHFDLLQ 336
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
++P T +AHDK + ++SYNP V ++ AT + D+ ++ W
Sbjct: 337 NLNEPILTIP------YAHDKCITSLSYNP-VGHIFATAAKDRTIRFW 377
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 167 (63.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 58/196 (29%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S +D S V K+ ++
Sbjct: 164 SGECNSDLHLRGHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ A+ V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAYTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LA+GS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 157 (60.3 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ +T +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL SGS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILASGSPDKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 154 (59.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++A GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 61 (26.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 40 HHHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+HH++I + P A D D EKG F GS+ IEI
Sbjct: 76 NHHLVIASVQLPNDDAQFDASYYDSEKGEFGGFGSVSGKIEI 117
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 194 (73.4 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 62/201 (30%), Positives = 107/201 (53%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR- 196
L S S D VKIWD A G+ TL+ H+ V+++A++ ++L SGS+D ++ + D+
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG-KLLASGSYDNTIDLWDSAT 823
Query: 197 ---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS 253
+ T G ++ S+A+ P + S +D TIK +D+ T + QQ
Sbjct: 824 GELLQTFEGHPHSIW----SVAFAPDGKELASAS-DDSTIKIWDLATGEL------QQ-- 870
Query: 254 FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF 313
TL +H ++V +++++P LLA+ S D +K+W+ + + S ++G V SVAF
Sbjct: 871 -TLDSHSQSVRSVAFSP-DGKLLASSSLDSTIKVWNPATGELQ--QSLEGRSGWVKSVAF 926
Query: 314 SEDSPFVLAIGGSKGKLEIWD 334
S D LA G K +++W+
Sbjct: 927 SPDGK-KLASGSEKNTVKLWN 946
Score = 178 (67.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 60/201 (29%), Positives = 99/201 (49%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
LAS S VK+W+ A G+ TLE H+ V++VA++ Q L S S D ++ + ++
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQ-LASSSSDTTIKLWNSTT 991
Query: 198 ST-HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL 256
FK + ++A+ P +H V +D TIK +D+ T S QQS L
Sbjct: 992 GELQQTFK-GHDLWIRAVAFSPDGKH-LVSGSDDNTIKLWDLAT------SELQQS---L 1040
Query: 257 HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 316
H ++V ++++P LA+ S D +KLWD + + + + V SV FS D
Sbjct: 1041 EDHSRSVHAVAFSP-DDKQLASSSLDSTIKLWDSATGELQRTLEGHSQG--VRSVTFSPD 1097
Query: 317 SPFVLAIGGSKGKLEIWDTLS 337
+LA G +++W+ L+
Sbjct: 1098 GK-LLASNSYDGTIKLWNPLT 1117
Score = 178 (67.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 63/218 (28%), Positives = 108/218 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ SV +A++ + + LAS+S D +K+WD A G+ TLE H+ V++V ++ ++
Sbjct: 1043 HSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDG-KL 1100
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L S S+D ++ + + + V+S+A+ P + D TIK +D T
Sbjct: 1101 LASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQ-LASGYYDSTIKLWDSAT 1159
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
+ Q TL H + ++ ++P LLA+GS D+ KLWD + + I
Sbjct: 1160 GE-----LLQ----TLEGHSDRIQSVVFSP-DGKLLASGSYDQTAKLWDPATGELLQIFE 1209
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGK-LEIWDTLS 337
+ K V SVAFS D L S G+ +++WD ++
Sbjct: 1210 GHSKW--VESVAFSPDGK--LLASSSYGETIKLWDPVT 1243
Score = 171 (65.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 58/215 (26%), Positives = 107/215 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ SV +A++ + + +LAS+S D +K+W+ A G+ +LE + V++VA++ +
Sbjct: 875 HSQSVRSVAFSPDGK-LLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK- 932
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L SGS +V + + + V S+A+ P + S D TIK ++
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQ-LASSSSDTTIKLWN--- 988
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
ST+ + T HD + ++++P +L++ GS D +KLWDL+ ++ S
Sbjct: 989 ------STTGELQQTFKGHDLWIRAVAFSPDGKHLVS-GSDDNTIKLWDLATSELQ--QS 1039
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
+ +V +VAFS D LA +++WD+
Sbjct: 1040 LEDHSRSVHAVAFSPDDK-QLASSSLDSTIKLWDS 1073
Score = 168 (64.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 59/231 (25%), Positives = 113/231 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H S+ +A+ + + LASAS D +KIWD+A G+ TL+ H+ V++VA++ ++
Sbjct: 833 HPHSIWSVAFAPDGKE-LASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG-KL 890
Query: 181 LLSGSFDRSV-VMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L S S D ++ V A + + V+S+A+ P + L G+ K
Sbjct: 891 LASSSLDSTIKVWNPATGELQQSLEGR-SGWVKSVAFSPDGK-----KLASGSEKN---- 940
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
T K +T + TL H ++V +++++P LA+ S+D +KLW+ + +
Sbjct: 941 TVKLWNPATGELLQ-TLEGHSQSVRSVAFSP-DGKQLASSSSDTTIKLWNSTTGELQQTF 998
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSK 350
+ + +VAFS D +++ G +++WD L+ + + +S+
Sbjct: 999 KGHDLW--IRAVAFSPDGKHLVS-GSDDNTIKLWD-LATSELQQSLEDHSR 1045
Score = 151 (58.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 54/197 (27%), Positives = 90/197 (45%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
L S S D +K+WD+A + +LE H+ V AVA++ Q L S S D ++ + D+
Sbjct: 1017 LVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSAT 1075
Query: 198 STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH 257
+ V S+ + P + + DGTIK ++ T + QQ TL
Sbjct: 1076 GELQRTLEGHSQGVRSVTFSPDGK-LLASNSYDGTIKLWNPLTGEL------QQ---TLT 1125
Query: 258 AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDS 317
V +++++P LA+G D +KLWD + + + + + + SV FS D
Sbjct: 1126 GRSDWVDSVAFSP-DGKQLASGYYDSTIKLWDSATGE--LLQTLEGHSDRIQSVVFSPDG 1182
Query: 318 PFVLAIGGSKGKLEIWD 334
+LA G ++WD
Sbjct: 1183 K-LLASGSYDQTAKLWD 1198
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 59/215 (27%), Positives = 102/215 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ +V LA++ + + +LAS S D + +WD A G+ T E H + +VA+ +
Sbjct: 791 HSGTVESLAFSPDGK-LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE- 848
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L S S D ++ + D + + V S+A+ P + SL D TIK ++ T
Sbjct: 849 LASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSL-DSTIKVWNPAT 907
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
+ QQS L V +++++P LA+GS VKLW+ + + + +
Sbjct: 908 GEL------QQS---LEGRSGWVKSVAFSP-DGKKLASGSEKNTVKLWNPATGE--LLQT 955
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
+ +V SVAFS D LA S +++W++
Sbjct: 956 LEGHSQSVRSVAFSPDGK-QLASSSSDTTIKLWNS 989
Score = 134 (52.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 56/215 (26%), Positives = 101/215 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ V + ++ + + +LAS S D +K+W+ G+ TL +D V +VA++ Q
Sbjct: 1085 HSQGVRSVTFSPDGK-LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQ- 1142
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L SG +D ++ + D+ + ++S+ + P + L G+ +D +T
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGK-----LLASGS---YD-QT 1193
Query: 241 AKS-DPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
AK DP + F H K V +++++P LLA+ S + +KLWD + +
Sbjct: 1194 AKLWDPATGELLQIF--EGHSKWVESVAFSP-DGKLLASSSYGETIKLWDPVTGE--LLQ 1248
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ N + SVAFS D + ++ K IWD
Sbjct: 1249 TLNDPDESAGSVAFSPDGNRLASVDIFDTK--IWD 1281
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 47/175 (26%), Positives = 82/175 (46%)
Query: 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPH 219
TLE+H V++V ++ Q L+SGS+D +V + D + VESLA+ P
Sbjct: 745 TLENHLGPVESVVFSPDGKQ-LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 220 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 279
+ D TI D+ DS + + T H ++ ++++ P L A+
Sbjct: 804 GK-LLASGSYDNTI---DLW------DSATGELLQTFEGHPHSIWSVAFAPDGKEL-ASA 852
Query: 280 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
S D +K+WDL+ + + + + +V SVAFS D +LA +++W+
Sbjct: 853 SDDSTIKIWDLATGELQ--QTLDSHSQSVRSVAFSPDGK-LLASSSLDSTIKVWN 904
Score = 37 (18.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 65 GNFMAVGSMEPAIEIWD 81
G +A S++ I++W+
Sbjct: 888 GKLLASSSLDSTIKVWN 904
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 60/196 (30%), Positives = 93/196 (47%)
Query: 154 AGKC--NLTLEHHTDKVQAVAWNHHSPQILLSGS-------FDRSVVMKDARISTHSGFK 204
+G+C +L L H + ++WN + LLS S +D S V K+ +I
Sbjct: 164 SGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S + AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-AVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 162 (62.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 44/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 158 (60.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++ GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S AV A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79
+H++I + P A D D EKG F GS+ IEI
Sbjct: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 185 (70.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 222
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 335
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 GTDRRLNVWD-LSKIG 350
Score = 159 (61.0 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Query: 291 S 291
S
Sbjct: 347 S 347
Score = 157 (60.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 290 LSNN 293
++ N
Sbjct: 403 MAEN 406
Score = 39 (18.8 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D +KG F GS+ IE
Sbjct: 76 NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE 115
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 185 (70.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 222
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 335
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 GTDRRLNVWD-LSKIG 350
Score = 159 (61.0 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Query: 291 S 291
S
Sbjct: 347 S 347
Score = 157 (60.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 290 LSNN 293
++ N
Sbjct: 403 MAEN 406
Score = 39 (18.8 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D +KG F GS+ IE
Sbjct: 76 NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE 115
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 185 (70.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 222
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 335
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 GTDRRLNVWD-LSKIG 350
Score = 159 (61.0 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Query: 291 S 291
S
Sbjct: 347 S 347
Score = 157 (60.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 290 LSNN 293
++ N
Sbjct: 403 MAEN 406
Score = 39 (18.8 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D +KG F GS+ IE
Sbjct: 76 NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE 115
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 185 (70.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 222
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 335
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 GTDRRLNVWD-LSKIG 350
Score = 159 (61.0 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Query: 291 S 291
S
Sbjct: 347 S 347
Score = 157 (60.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 290 LSNN 293
++ N
Sbjct: 403 MAEN 406
Score = 39 (18.8 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D +KG F GS+ IE
Sbjct: 76 NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE 115
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 182 (69.1 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 48/178 (26%), Positives = 88/178 (49%)
Query: 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL-EHHTDKVQAVAWNH-HSPQ 179
TD++ + W++ ++L + S D +++WD A L + + HT +V +V W+ Q
Sbjct: 67 TDALFDVTWSENNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 180 ILLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
+++SGS+D++V + D + FK + + S W PH F + D T++ +D+
Sbjct: 127 LVVSGSWDQTVKLWDPTVGRSLCTFKGHESI-IYSTIWSPHIPGCFASASGDQTLRIWDV 185
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQP 295
+T T + + AH + + + NLL TG+ D ++ WDL N QP
Sbjct: 186 KT-------TGVR--IVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQP 234
Score = 181 (68.8 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 45/176 (25%), Positives = 82/176 (46%)
Query: 121 HTDSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
HT V + W++ ++ S S D+ VK+WD G+ T + H + + W+ H P
Sbjct: 110 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGRSLCTFKGHESIIYSTIWSPHIPG 169
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
S S D+++ + D + + A A++ S W + E+ V D +++G+D+R
Sbjct: 170 CFASASGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR 229
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
+ Q F L H A+ + ++P ++LA+ S D V+ W+ S P
Sbjct: 230 NVR--------QPVFELLGHTYAIRRVKFSPFYASVLASCSYDFTVRFWNFSKPNP 277
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 181 (68.8 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 61/196 (31%), Positives = 94/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---KWAV- 207
+G+C+ L L H + ++WN + LLS S D +V + D G AV
Sbjct: 163 SGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVF 222
Query: 208 ---AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S ++ AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHSVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVHWSPHNETILASS 335
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 GTDRRLNVWD-LSKIG 350
Score = 164 (62.8 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 49/181 (27%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD++AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S +V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Query: 291 S 291
S
Sbjct: 347 S 347
Score = 162 (62.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 290 LSNN 293
++ N
Sbjct: 403 MAEN 406
Score = 43 (20.2 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 41 HHIIIPAF--PLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D EKG F GS+ IE
Sbjct: 76 NHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIE 115
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 180 (68.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 58/196 (29%), Positives = 93/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G C+ L L H + ++WN + LLS S D +V + K+ ++
Sbjct: 163 SGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIF 222
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S ++ AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHSVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVHWSPHNETILASS 335
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 GTDRRLNVWD-LSKIG 350
Score = 163 (62.4 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 49/181 (27%), Positives = 84/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD++AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S +V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Query: 291 S 291
S
Sbjct: 347 S 347
Score = 162 (62.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 290 LSNN 293
++ N
Sbjct: 403 MAEN 406
Score = 44 (20.5 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D EKG F GS+ IE
Sbjct: 76 NHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIE 115
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 181 (68.8 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 59/218 (27%), Positives = 101/218 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V ++ + R ++AS+S+D +++WDVA KC L+ H V+ V+++ S Q
Sbjct: 67 HRGPVKSCCFSPDGR-LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ- 124
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L SG +D+ ++ + + ++S + P ++ S D T+ +D+R
Sbjct: 125 LASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSD-SLATGSWDSTVHIWDLRA 183
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD-LSNNQPSCIA 299
ST S L H + + Y+ LLA+GS DK + +W +NN P +
Sbjct: 184 ------STPVVSYHNLEGHTGNISCLCYS--ASGLLASGSWDKTICVWKPTTNNLPLQLK 235
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
V S+AFS D LA G +++WD L+
Sbjct: 236 GHTIW---VNSLAFSPDE-LKLASAGYSRTVKVWDCLT 269
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 185 (70.2 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 154 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 213
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 214 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 267
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 268 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 326
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 327 GTDRRLNVWD-LSKIG 341
Score = 159 (61.0 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 166 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 225
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 226 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 285
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 286 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 337
Query: 291 S 291
S
Sbjct: 338 S 338
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 216 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 275
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 276 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 333
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 334 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 393
Query: 290 LSNN 293
++ N
Sbjct: 394 MAEN 397
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 185 (70.2 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G+CN L L H + ++WN + LLS S D +V + K+ +I
Sbjct: 154 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 213
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 214 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS------NTTSKPSHLVDAHTAEVN 267
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 268 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVHWSPHNETILASS 326
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 327 GTDRRLNVWD-LSKIG 341
Score = 159 (61.0 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 166 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 225
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R +T S V A+V L+++P++E D
Sbjct: 226 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 285
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K T +H + + ++P +LA+ TD+ + +WDL
Sbjct: 286 KTVALWDLRNLKL--------KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 337
Query: 291 S 291
S
Sbjct: 338 S 338
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ IWD + K + ++ HT +V +++N +S
Sbjct: 216 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 275
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + ++ + W PH E S D +
Sbjct: 276 EFILATGSADKTVALWDLRNLKLKLHT-FE-SHKDEIFQVHWSPHNETILASSGTDRRLN 333
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 334 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 393
Query: 290 LSNN 293
++ N
Sbjct: 394 MAEN 397
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 182 (69.1 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 49/179 (27%), Positives = 84/179 (46%)
Query: 121 HTDSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
HT V + W++ ++ S S D+ VK+WD GK T H + + W+ H P
Sbjct: 110 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPG 169
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAA---DVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D+++ + D + ST G + V A ++ S W + E+ V D +++G+
Sbjct: 170 CFASASGDQTLRIWDVK-ST--GVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGW 226
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
D+R + Q F L H A+ + ++P ++LA+ S D V+ W+ S P
Sbjct: 227 DLRNVR--------QPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDP 277
Score = 173 (66.0 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL-EHHTDKVQAVAWNH-HSPQI 180
D + + W++ +IL + S D +++WD A L + + HT +V +V W+ Q+
Sbjct: 68 DGLFDVTWSENNEHILVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQL 127
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
++SGS+D++V + D + F+ + + S W PH F + D T++ +D++
Sbjct: 128 VVSGSWDQTVKLWDPTVGKSLCTFRGHESV-IYSTIWSPHIPGCFASASGDQTLRIWDVK 186
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQP 295
ST + + AH + + + NLL TG+ D ++ WDL N QP
Sbjct: 187 -------STGVR--IVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQP 234
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 185 (70.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 72/231 (31%), Positives = 97/231 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W S
Sbjct: 265 HKGPIFALKWNKK-GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNT 321
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V K D I T G +V ++ WDP S +D T+K
Sbjct: 322 FASCSTDMCIHVCKLGQDRPIKTFQGH----TNEVNAIKWDPTGNLLASCS-DDMTLK-- 374
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-------NL-LATGSTDKMVKLW 288
I + K D L AH+K + TI ++P P NL LA+ S D V+LW
Sbjct: 375 -IWSMKQD------NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339
D+ CI + V+SVAFS D + LA G + IW+T + A
Sbjct: 428 DVDRG--ICIHTLTKHQEPVYSVAFSPDGRY-LASGSFDKCVHIWNTQTGA 475
Score = 40 (19.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/65 (24%), Positives = 23/65 (35%)
Query: 20 SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKD-REKGNFMAVGSMEPAIE 78
S ++ L E+ P V H I + D D +G +A GS +
Sbjct: 191 STARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFAR 250
Query: 79 IWDLD 83
IW D
Sbjct: 251 IWTKD 255
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 185 (70.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 72/231 (31%), Positives = 97/231 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W S
Sbjct: 265 HKGPIFALKWNKK-GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNT 321
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V K D I T G +V ++ WDP S +D T+K
Sbjct: 322 FASCSTDMCIHVCKLGQDRPIKTFQGH----TNEVNAIKWDPTGNLLASCS-DDMTLK-- 374
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-------NL-LATGSTDKMVKLW 288
I + K D L AH+K + TI ++P P NL LA+ S D V+LW
Sbjct: 375 -IWSMKQD------NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339
D+ CI + V+SVAFS D + LA G + IW+T + A
Sbjct: 428 DVDRG--ICIHTLTKHQEPVYSVAFSPDGRY-LASGSFDKCVHIWNTQTGA 475
Score = 40 (19.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/65 (24%), Positives = 23/65 (35%)
Query: 20 SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKD-REKGNFMAVGSMEPAIE 78
S ++ L E+ P V H I + D D +G +A GS +
Sbjct: 191 STARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFAR 250
Query: 79 IWDLD 83
IW D
Sbjct: 251 IWTKD 255
>ZFIN|ZDB-GENE-040426-2044 [details] [associations]
symbol:cdc20 "cell division cycle 20 homolog"
species:7955 "Danio rerio" [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2044 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HSSP:P16649 KO:K03363 CTD:991 HOVERGEN:HBG001024
EMBL:BC054907 IPI:IPI00611755 RefSeq:NP_998245.1 UniGene:Dr.105018
ProteinModelPortal:Q7SYD7 STRING:Q7SYD7 GeneID:406353
KEGG:dre:406353 InParanoid:Q7SYD7 NextBio:20817971
ArrayExpress:Q7SYD7 Uniprot:Q7SYD7
Length = 496
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 58/222 (26%), Positives = 108/222 (48%)
Query: 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSG 184
+ ++W+K+ N LA ++D +V++WDV K +++ H+ +V ++WN H IL SG
Sbjct: 230 ICSVSWSKD-GNFLAIGTSDCKVELWDVQYQKRLRSMDGHSARVGCLSWNDH---ILSSG 285
Query: 185 SFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKS 243
S + D R++ H F + +V L W P + D + + + T
Sbjct: 286 SRSGLIHQHDVRVADHHIFTFGGHTQEVCGLTWSPDGRY-LASGGNDNMMYIWPMTTGSE 344
Query: 244 DPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIASR 301
+ Q+ L H AV +++ P PN+ A+G ++D+ +++W+ S+ SCI+S
Sbjct: 345 N------QAIHALSEHQGAVKALAWCPWQPNIPASGGGTSDRHIRIWNASSG--SCISSL 396
Query: 302 NPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIWDTLSDAGIS 342
+ V S+ F+ + V G + K+ IW S A ++
Sbjct: 397 DT-CSQVSSLVFAPNYKELVSGHGFAHDKVVIWKYPSFAKVT 437
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 178 (67.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 72/276 (26%), Positives = 121/276 (43%)
Query: 65 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEXXXXXXXXXXXXXXXXXXXXHT-- 122
G +A GS + I++W+ D ++ H + G D HT
Sbjct: 95 GQLLASGSSDTTIKLWN-SASDSLK-HTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIE 152
Query: 123 ---DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
D VL +A++ + + +LAS SA+K +K+WD A TL H++ V + ++ +
Sbjct: 153 GHSDWVLSVAFSPDGQ-LLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDG-R 210
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+L SGS D ++ + D + + +ESLA+ P+ + D TIK +D
Sbjct: 211 LLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ-LLASGSSDATIKLWDTA 269
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
T TL H V ++ ++P LL +GS D +KLWD + +
Sbjct: 270 TGSF---------RHTLKGHSDMVLSVVFSP-DSQLLESGSGDNTIKLWDPATGILKH-S 318
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
R P G V S+ FS + P ++ G+ ++ W T
Sbjct: 319 MRTP--GIVRSIEFSIELPQLITNLGTFS-IQAWHT 351
Score = 151 (58.2 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 61/233 (26%), Positives = 109/233 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+D + + ++ + R +LAS S D +K+WD A+G TLE H+ VQ+VA++ + Q+
Sbjct: 40 HSDWIETVTFSPDGR-LLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG-QL 97
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAE--HSFVVSLEDGTIKGFD- 237
L SGS D ++ + ++ + + VES+A+ P+ + + + SL+ TI+G
Sbjct: 98 LASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKH-TIEGHSD 156
Query: 238 -IRTAKSDPDS---TSQQSSFTLHAHDKAVCTISYN---------PLV--PNLLATGSTD 282
+ + PD S + T+ D A C + + PLV P+ S
Sbjct: 157 WVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGS 216
Query: 283 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
+ S + + + S+AFS + +LA G S +++WDT
Sbjct: 217 NDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ-LLASGSSDATIKLWDT 268
Score = 43 (20.2 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 65 GNFMAVGSMEPAIEIWD 81
G +A GS + I++WD
Sbjct: 53 GRLLASGSNDTTIKLWD 69
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 185 (70.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 72/231 (31%), Positives = 97/231 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W S
Sbjct: 265 HKGPIFALKWNKK-GNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQ--SNNT 321
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V K D I T G +V ++ WDP S +D T+K
Sbjct: 322 FASCSTDMCIHVCKLGQDRPIKTFQGH----TNEVNAIKWDPTGNLLASCS-DDMTLK-- 374
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-------NL-LATGSTDKMVKLW 288
I + K D L AH+K + TI ++P P NL LA+ S D V+LW
Sbjct: 375 -IWSMKQD------NCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLW 427
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339
D+ CI + V+SVAFS D + LA G + IW+T + A
Sbjct: 428 DVDRG--ICIHTLTKHQEPVYSVAFSPDGRY-LASGSFDKCVHIWNTQTGA 475
Score = 37 (18.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 64 KGNFMAVGSMEPAIEIWDLD 83
+G +A GS + IW D
Sbjct: 236 EGTLLATGSYDGFARIWTKD 255
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 185 (70.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 72/231 (31%), Positives = 97/231 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W S
Sbjct: 265 HKGPIFALKWNKK-GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNT 321
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V K D I T G +V ++ WDP S +D T+K
Sbjct: 322 FASCSTDMCIHVCKLGQDRPIKTFQGH----TNEVNAIKWDPTGNLLASCS-DDMTLK-- 374
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-------NL-LATGSTDKMVKLW 288
I + K D L AH+K + TI ++P P NL LA+ S D V+LW
Sbjct: 375 -IWSMKQD------NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339
D+ CI + V+SVAFS D + LA G + IW+T + A
Sbjct: 428 DVDRG--ICIHTLTKHQEPVYSVAFSPDGRY-LASGSFDKCVHIWNTQTGA 475
Score = 37 (18.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 64 KGNFMAVGSMEPAIEIWDLD 83
+G +A GS + IW D
Sbjct: 236 EGTLLATGSYDGFARIWTKD 255
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 185 (70.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 72/231 (31%), Positives = 97/231 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W S
Sbjct: 265 HKGPIFALKWNKK-GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNT 321
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V K D I T G +V ++ WDP S +D T+K
Sbjct: 322 FASCSTDMCIHVCKLGQDRPIKTFQGH----TNEVNAIKWDPTGNLLASCS-DDMTLK-- 374
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-------NL-LATGSTDKMVKLW 288
I + K D L AH+K + TI ++P P NL LA+ S D V+LW
Sbjct: 375 -IWSMKQD------NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339
D+ CI + V+SVAFS D + LA G + IW+T + A
Sbjct: 428 DVDRG--ICIHTLTKHQEPVYSVAFSPDGRY-LASGSFDKCVHIWNTQTGA 475
Score = 37 (18.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 64 KGNFMAVGSMEPAIEIWDLD 83
+G +A GS + IW D
Sbjct: 236 EGTLLATGSYDGFARIWTKD 255
>UNIPROTKB|Q05048 [details] [associations]
symbol:CSTF1 "Cleavage stimulation factor subunit 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0003723 "RNA binding" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0006378 "mRNA polyadenylation"
evidence=TAS] [GO:0006379 "mRNA cleavage" evidence=TAS] [GO:0006396
"RNA processing" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006397 "mRNA processing"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CH471077 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 Reactome:REACT_1675 GO:GO:0006378
GO:GO:0003723 GO:GO:0000398 Pathway_Interaction_DB:bard1pathway
EMBL:AL121914 Reactome:REACT_1788 GO:GO:0006379 GO:GO:0006369
Reactome:REACT_78 EMBL:L02547 EMBL:BT007138 EMBL:AK312774
EMBL:BC001011 EMBL:BC007425 IPI:IPI00011528 PIR:A45142
RefSeq:NP_001028693.1 RefSeq:NP_001028694.1 RefSeq:NP_001315.1
UniGene:Hs.172865 ProteinModelPortal:Q05048 SMR:Q05048
IntAct:Q05048 STRING:Q05048 PhosphoSite:Q05048 DMDM:461848
REPRODUCTION-2DPAGE:IPI00011528 PaxDb:Q05048 PeptideAtlas:Q05048
PRIDE:Q05048 DNASU:1477 Ensembl:ENST00000217109
Ensembl:ENST00000415828 Ensembl:ENST00000452950 GeneID:1477
KEGG:hsa:1477 UCSC:uc002xxl.1 CTD:1477 GeneCards:GC20P054967
H-InvDB:HIX0015931 HGNC:HGNC:2483 HPA:CAB019270 MIM:600369
neXtProt:NX_Q05048 PharmGKB:PA26985 HOGENOM:HOG000234077
HOVERGEN:HBG051144 InParanoid:Q05048 KO:K14406 OMA:LYDHTDE
OrthoDB:EOG4868CD PhylomeDB:Q05048 GenomeRNAi:1477 NextBio:6065
ArrayExpress:Q05048 Bgee:Q05048 CleanEx:HS_CSTF1
Genevestigator:Q05048 GermOnline:ENSG00000101138 Uniprot:Q05048
Length = 431
Score = 181 (68.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 54/179 (30%), Positives = 93/179 (51%)
Query: 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD-ARISTHSGFKWAVAADV-ESLAWD 217
TL H D+V +A+ H + QIL SGS D ++ + D ++ S FK+ A++ S+++
Sbjct: 168 TLYDHVDEVTCLAF-HPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFH 226
Query: 218 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 277
P + +V + T++ +DI T + Q H A+C+++YN N+
Sbjct: 227 PSGDF-ILVGTQHPTLRLYDINTFQCFVSCNPQDQ------HTDAICSVNYNSSA-NMYV 278
Query: 278 TGSTDKMVKLWDLSNNQPSCIAS-RNPKAGA-VFSVAFSEDSPFVLAIGGSKGKLEIWD 334
TGS D +KLWD +N+ CI + GA V S FS++S ++L+ G ++W+
Sbjct: 279 TGSKDGCIKLWDGVSNR--CITTFEKAHDGAEVCSAIFSKNSKYILS-SGKDSVAKLWE 334
Score = 38 (18.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 137 ILASASADKQVKIWD 151
++A+ SAD +KI D
Sbjct: 122 LIATGSADASIKILD 136
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 177 (67.4 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 45/176 (25%), Positives = 80/176 (45%)
Query: 121 HTDSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
HT V + W++ ++ S S D+ VK+WD G T H + + W+ H P
Sbjct: 105 HTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPG 164
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
S S D+++ + D + + A A++ S W + E+ V D +++G+D+R
Sbjct: 165 CFASASGDQTLRIWDVKTTGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR 224
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
+ Q F L H A+ + ++P ++LA+ S D V+ W+ S P
Sbjct: 225 NVR--------QPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDP 272
Score = 174 (66.3 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 46/177 (25%), Positives = 86/177 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL-EHHTDKVQAVAWNH-HSPQI 180
D + + W++ ++L + S D +++WD A L + + HT +V +V W+ Q+
Sbjct: 63 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQL 122
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
++SGS+D++V + D + F+ + + S W PH F + D T++ +D++
Sbjct: 123 VVSGSWDQTVKVWDPTVGNSLCTFRGHESV-IYSTIWSPHIPGCFASASGDQTLRIWDVK 181
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQP 295
T T + + AH + + + NLL TG+ D ++ WDL N QP
Sbjct: 182 T-------TGVR--IVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQP 229
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00092
Identities = 42/182 (23%), Positives = 79/182 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + W+ ASAS D+ ++IWDV + + H ++ + W ++ +
Sbjct: 149 HESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQAEILSCDWCKYNENL 208
Query: 181 LLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDP-HAEHSFVVSLE-DGTIKGFD 237
L++G+ D S+ D R F+ + + + P HA S + S D T++ ++
Sbjct: 209 LVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHA--SVLASCSYDFTVRFWN 266
Query: 238 IRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC 297
S PD + T+ H + C + + P +A S D+ VK+++ P C
Sbjct: 267 F----SKPDPLLE----TVEHHTEFTCGLDLSLQSPTEVADCSWDETVKIYN-----PVC 313
Query: 298 IA 299
+A
Sbjct: 314 LA 315
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 176 (67.0 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 45/178 (25%), Positives = 87/178 (48%)
Query: 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL-EHHTDKVQAVAWNH-HSPQ 179
+D + + W+++ ++L + S D +++WD A L + + HT +V +V W+ Q
Sbjct: 62 SDGLFDVTWSEDNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQ 121
Query: 180 ILLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
+++SGS+D++V + D + F+ + + S W PH F + D T++ +D+
Sbjct: 122 LVVSGSWDQTVKVWDPTVGNSLCTFRGHESV-IYSTIWSPHIPGCFASASGDQTLRIWDV 180
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQP 295
+TA + AH + + + NL+ TG+ D ++ WDL N QP
Sbjct: 181 KTAGV---------RIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQP 229
Score = 174 (66.3 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 45/179 (25%), Positives = 82/179 (45%)
Query: 121 HTDSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
HT V + W++ ++ S S D+ VK+WD G T H + + W+ H P
Sbjct: 105 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPG 164
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAA---DVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D+++ + D + + G + + A ++ S W + E+ V D +++G+
Sbjct: 165 CFASASGDQTLRIWDVKTA---GVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGW 221
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
D+R + Q F L H A+ + ++P ++LA+ S D V+ W+ S P
Sbjct: 222 DLRNVR--------QPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDP 272
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 178 (67.7 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 62/197 (31%), Positives = 92/197 (46%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---KWAV- 207
+G+CN L L H + ++WN + LLS S D +V + D G AV
Sbjct: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVF 222
Query: 208 ---AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
+A VE +AW E F +D + +D R+ +T+ + S + AH V
Sbjct: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRS------NTTSKPSHLVDAHTAEVN 276
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVA-FSEDSPFVLAI 323
+S+NP +LATGS DK V LWDL N + + K +F V +S + +LA
Sbjct: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK-DEIFQVVHWSPHNETILAS 335
Query: 324 GGSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 336 SGTDRRLNVWD-LSKIG 351
Score = 162 (62.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 50/181 (27%), Positives = 82/181 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D V +WD+ AG H+ V+ VAW
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAW 234
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ ++M D R +T S V A+V L+++P++E D
Sbjct: 235 HLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + +F H D+ + ++P +LA+ TD+ + +WDL
Sbjct: 295 KTVALWDLRNLKL------KLHTFESHK-DEIFQVVHWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
Score = 152 (58.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
H+ V +AW+ ++ S + D+++ +WD + K + ++ HT +V +++N +S
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + H+ F+ + + W PH E S D +
Sbjct: 285 EFILATGSADKTVALWDLRNLKLKLHT-FESHKDEIFQVVHWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 39 (18.8 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 41 HHIIIPA--FPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H+++ P A D D +KG F GS+ IE
Sbjct: 76 NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE 115
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 181 (68.8 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 71/220 (32%), Positives = 106/220 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H +VL ++++ + R +LASAS D+ VKIWD G TLE H+D V++V ++H S ++
Sbjct: 295 HEAAVLSVSYSHDSR-LLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS-RL 352
Query: 181 LLSGSFDRSVVMKDARIST--HS--GFK-WAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235
L S S D +V + D + H+ G + W V S+ + H + +D T+K
Sbjct: 353 LASAS-DSTVKIWDTGTGSLQHTLEGHRDW-----VRSVIFS-HDSQLLASASDDSTVKI 405
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
+D T S Q TL H V ++ ++ LLA+ S D VK+WD
Sbjct: 406 WDTGTG-------SLQH--TLEGHRDWVRSVIFSH-DSQLLASASDDSTVKIWDTGTG-- 453
Query: 296 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
S + V SV FS DS +LA + IWDT
Sbjct: 454 SLQHTLEGHRDWVRSVIFSHDSR-LLASASDDRTVRIWDT 492
Score = 162 (62.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 55/175 (31%), Positives = 87/175 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D V + ++ + + +LASAS D VKIWD G TLE H D V++V ++H S Q+
Sbjct: 378 HRDWVRSVIFSHDSQ-LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS-QL 435
Query: 181 LLSGSFDRSVVMKDARIST--HS--GFK-WAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235
L S S D +V + D + H+ G + W V S+ + H + +D T++
Sbjct: 436 LASASDDSTVKIWDTGTGSLQHTLEGHRDW-----VRSVIFS-HDSRLLASASDDRTVRI 489
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
+D T K TL H V ++S++ LLA+ S D+ V++WD+
Sbjct: 490 WD--TEKGS-------HKHTLEGHSSLVTSVSFSH-DSRLLASASNDQTVRIWDI 534
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D V + ++ + R +LASAS D+ V+IWD G TLE H+ V +V+++H S ++
Sbjct: 462 HRDWVRSVIFSHDSR-LLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDS-RL 519
Query: 181 LLSGSFDRSVVMKD--ARISTHSGFKWAVAADVESLAWD 217
L S S D++V + D AR H+ + + A +E++ +D
Sbjct: 520 LASASNDQTVRIWDIEARSLQHT---FDLDATIEAMRFD 555
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 53/179 (29%), Positives = 79/179 (44%)
Query: 157 CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAW 216
C LE H V +V+++H S ++L S S DR+V + D + + V S+ +
Sbjct: 288 CLQALEGHEAAVLSVSYSHDS-RLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF 346
Query: 217 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 276
H + + S D T+K +D T S Q TL H V ++ ++ LL
Sbjct: 347 S-H-DSRLLASASDSTVKIWDTGTG-------SLQH--TLEGHRDWVRSVIFSH-DSQLL 394
Query: 277 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
A+ S D VK+WD S + V SV FS DS +LA ++IWDT
Sbjct: 395 ASASDDSTVKIWDTGTG--SLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDT 450
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 175 (66.7 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 58/176 (32%), Positives = 96/176 (54%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHHSP 178
HT ++ +AW+ R LASAS D V IWD +G+ CN TLE H ++V++V+W+ S
Sbjct: 59 HTRTIRDVAWSPCGR-FLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSK-SG 116
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAV-----AADVESLAWDPHAEHSFVVSLEDGTI 233
+L + S D+SV + + ++ ++ A + DV+ + W P+ E + D TI
Sbjct: 117 ALLATCSRDKSVWIWE--VAQEDEYECAAVLNTHSQDVKKVEWHPN-EDVLASASYDNTI 173
Query: 234 KGFDIRTAKSDPDSTSQQSSF-TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
+ + A SD SSF TL +HD V +I+++ + LA+ S D+ V++W
Sbjct: 174 QLYREDLADSD------WSSFDTLASHDSTVWSIAFDAS-GSRLASCSDDQTVRIW 222
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 184 (69.8 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 66/225 (29%), Positives = 95/225 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK N + SA DK IWD + G+C H+ V W + Q
Sbjct: 450 HKGPIFALKWNK-CGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTN--QA 506
Query: 181 LLSGSFDRSVVMKDARISTHSGFKW--AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
S S D+ + + R+ + K +V ++ W P + S +D T+K + +
Sbjct: 507 FASCSTDQRIHV--CRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCS-DDMTLKIWSM 563
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-------NL-LATGSTDKMVKLWDL 290
+ D L AH K + TI ++P P NL LA+ S D V+LWD+
Sbjct: 564 NRDRCCHD---------LQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDV 614
Query: 291 SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
SCI + V+SVAFS D LA G + IW T
Sbjct: 615 ERG--SCIHTLTKHTEPVYSVAFSPDGKH-LASGSFDKCVHIWST 656
Score = 123 (48.4 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
ILASAS D V++WDV G C TL HT+ V +VA++ L SGSFD+ V + +
Sbjct: 599 ILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKH-LASGSFDKCVHIWSTQ 657
Query: 197 IS--THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
HS +K + + W+ S DG++ D+R
Sbjct: 658 TGQLVHS-YKGT--GGIFEVCWNSKGT-KVGASASDGSVFVLDLR 698
Score = 38 (18.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 65 GNFMAVGSMEPAIEIWDLD 83
G+ +A GS + IW D
Sbjct: 422 GSLLATGSYDGYARIWKTD 440
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 179 (68.1 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 68/229 (29%), Positives = 97/229 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W +++
Sbjct: 274 HKGPIFALKWNKK-GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTT-- 330
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V + D + T G +V ++ WDP S +D T+K
Sbjct: 331 FASCSTDMCIHVCRLGCDRPVKTFQGH----TNEVNAIKWDPSGMLLASCS-DDMTLK-- 383
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN--------LLATGSTDKMVKLW 288
I + K D T L AH K + TI ++P P +LA+ S D V+LW
Sbjct: 384 -IWSMKQD---TCVHD---LQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLW 436
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D+ CI + V+SVAFS D + LA G + IW+T S
Sbjct: 437 DVDRGV--CIHTLTKHQEPVYSVAFSPDGKY-LASGSFDKCVHIWNTQS 482
Score = 120 (47.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
+LASAS D V++WDV G C TL H + V +VA++ + L SGSFD+ V + + +
Sbjct: 423 MLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDG-KYLASGSFDKCVHIWNTQ 481
Query: 197 IST--HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
T HS + + + W+ + S DG++ D+R
Sbjct: 482 SGTLVHS---YRGTGGIFEVCWNARGD-KVGASASDGSVCVLDLR 522
Score = 43 (20.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 59 LKDREKGNFMAVGSMEPAIEIWD 81
LK +KGN++ ++ IWD
Sbjct: 281 LKWNKKGNYILSAGVDKTTIIWD 303
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 174 (66.3 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 61/233 (26%), Positives = 108/233 (46%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN---LTLEHHTDKVQAVAWNHHSPQ 179
D+V + W++ ++L +A D VKI+D A + + + H +VQ+V +N
Sbjct: 61 DAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRD 120
Query: 180 ILLSGSFDRSVVM--KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFD 237
L+ S+D +V + D S + FK A V W+P F + D T++ +D
Sbjct: 121 SFLTSSWDDTVKLWAMDRPASVRT-FK-EHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Query: 238 IRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC 297
+R +P ST + AHD + + +N +LAT S DK VK+WD+ + +
Sbjct: 179 VR----EPGST-----MIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVP- 228
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSK 350
+A N AV V FS ++A + +WD + + + R+ +++
Sbjct: 229 LAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVEDALVGRYDHHTE 281
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 42/173 (24%), Positives = 73/173 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V WN + ++ ASAS D ++IWDV + + H ++ + WN + I
Sbjct: 148 HAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCI 207
Query: 181 LLSGSFDRSVVMKDAR-----ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235
L + S D++V + D R ++ +G +AV + + PH S + S
Sbjct: 208 LATSSVDKTVKVWDVRSYRVPLAVLNGHGYAV----RKVKFSPH-RRSLIASCS------ 256
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
+D+ D H H + I + LV L+A+ D++V +W
Sbjct: 257 YDMSVCLWDYMVEDALVGRYDH-HTEFAVGIDMSVLVEGLMASTGWDELVYVW 308
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 174 (66.3 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 45/179 (25%), Positives = 82/179 (45%)
Query: 121 HTDSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
HT V + W++ ++ S S D+ VK+WD G T H + + W+ H P
Sbjct: 105 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPG 164
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAA---DVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D+++ + D + + G + + A ++ S W + E+ V D +++G+
Sbjct: 165 CFASASGDQTLRIWDVKTT---GVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGW 221
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
D+R + Q F L H A+ + ++P ++LA+ S D V+ W+ S P
Sbjct: 222 DLRNVR--------QPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDP 272
Score = 171 (65.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/177 (25%), Positives = 86/177 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL-EHHTDKVQAVAWNH-HSPQI 180
D + + W++ ++L + S D +++WD A L + + HT +V +V W+ Q+
Sbjct: 63 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQL 122
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
++SGS+D++V + D + F+ + + S W PH F + D T++ +D++
Sbjct: 123 VVSGSWDQTVKVWDPTVGNSLCTFRGHESV-IYSTIWSPHIPGCFASASGDQTLRIWDVK 181
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQP 295
T T + + AH + + + NL+ TG+ D ++ WDL N QP
Sbjct: 182 T-------TGVR--IVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQP 229
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 182 (69.1 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 62/192 (32%), Positives = 94/192 (48%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
+LAS S D+ V++WD A G TLE H+ V +VA++ ++L SGSFD++V + D
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDG-RLLASGSFDKTVRLWDPA 767
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL 256
+ + V S+A+ P L G+ FD DP + S Q TL
Sbjct: 768 TGSLQQTLRGHSNWVRSVAFSPDGR-----LLASGS---FDKTVRLWDPATGSLQQ--TL 817
Query: 257 HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN--QPSCIASRNPKAGAVFSVAFS 314
H V +++++P LLA+GS DK V+LWD + Q + I G V + FS
Sbjct: 818 RGHSDTVRSVAFSP-DGRLLASGSFDKTVRLWDPATGTLQQTLIIK-----GTVTELQFS 871
Query: 315 EDSPFVLAIGGS 326
+D ++ GS
Sbjct: 872 QDGSYISTNLGS 883
Score = 134 (52.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H++ V +A++ + R +LAS S DK V++WD A G TL H+D V++VA++ ++
Sbjct: 778 HSNWVRSVAFSPDGR-LLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDG-RL 835
Query: 181 LLSGSFDRSVVMKDARIST 199
L SGSFD++V + D T
Sbjct: 836 LASGSFDKTVRLWDPATGT 854
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/98 (34%), Positives = 57/98 (58%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ VL +A++ + R +LAS S DK V++WD A G TL H++ V++VA++ ++
Sbjct: 736 HSGWVLSVAFSPDGR-LLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDG-RL 793
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDP 218
L SGSFD++V + D + + V S+A+ P
Sbjct: 794 LASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSP 831
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 65 GNFMAVGSMEPAIEIWD 81
G +A GS + + +WD
Sbjct: 749 GRLLASGSFDKTVRLWD 765
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 177 (67.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 68/229 (29%), Positives = 97/229 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W +++
Sbjct: 278 HKGPIFALKWNKK-GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTT-- 334
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V + D + T G +V ++ WDP S +D T+K
Sbjct: 335 FASCSTDMCIHVCRLGCDRPVKTFQGH----TNEVNAIKWDPSGMLLASCS-DDMTLK-- 387
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-----N---LLATGSTDKMVKLW 288
I + K D L AH K + TI ++P P N +LA+ S D V+LW
Sbjct: 388 -IWSMKQDA------CVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D+ CI + V+SVAFS D + LA G + IW+T S
Sbjct: 441 DVERGV--CIHTLTKHQEPVYSVAFSPDGKY-LASGSFDKCVHIWNTQS 486
Score = 119 (46.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 124 SVLGLAWNKEFRNI-LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
S G A + NI LASAS D V++WDV G C TL H + V +VA++ + L
Sbjct: 413 SPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDG-KYLA 471
Query: 183 SGSFDRSVVMKDARIST--HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
SGSFD+ V + + + + HS + + + W+ + S DG++ D+R
Sbjct: 472 SGSFDKCVHIWNTQSGSLVHS---YRGTGGIFEVCWNARGD-KVGASASDGSVCVLDLR 526
Score = 43 (20.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 59 LKDREKGNFMAVGSMEPAIEIWD 81
LK +KGN++ ++ IWD
Sbjct: 285 LKWNKKGNYILSAGVDKTTIIWD 307
Score = 40 (19.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 15/56 (26%), Positives = 20/56 (35%)
Query: 28 EESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD 83
E S+GG L + H I + L G +A GS + IW D
Sbjct: 213 ENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTED 268
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 177 (67.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 68/229 (29%), Positives = 97/229 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W +++
Sbjct: 278 HKGPIFALKWNKK-GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTT-- 334
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V + D + T G +V ++ WDP S +D T+K
Sbjct: 335 FASCSTDMCIHVCRLGCDRPVKTFQGH----TNEVNAIKWDPSGMLLASCS-DDMTLK-- 387
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-----N---LLATGSTDKMVKLW 288
I + K D L AH K + TI ++P P N +LA+ S D V+LW
Sbjct: 388 -IWSMKQDA------CVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 440
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D+ CI + V+SVAFS D + LA G + IW+T S
Sbjct: 441 DVERGV--CIHTLTKHQEPVYSVAFSPDGKY-LASGSFDKCVHIWNTQS 486
Score = 119 (46.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 124 SVLGLAWNKEFRNI-LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
S G A + NI LASAS D V++WDV G C TL H + V +VA++ + L
Sbjct: 413 SPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDG-KYLA 471
Query: 183 SGSFDRSVVMKDARIST--HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
SGSFD+ V + + + + HS + + + W+ + S DG++ D+R
Sbjct: 472 SGSFDKCVHIWNTQSGSLVHS---YRGTGGIFEVCWNARGD-KVGASASDGSVCVLDLR 526
Score = 43 (20.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 59 LKDREKGNFMAVGSMEPAIEIWD 81
LK +KGN++ ++ IWD
Sbjct: 285 LKWNKKGNYILSAGVDKTTIIWD 307
Score = 40 (19.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 15/56 (26%), Positives = 20/56 (35%)
Query: 28 EESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD 83
E S+GG L + H I + L G +A GS + IW D
Sbjct: 213 ENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTED 268
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 172 (65.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 52/215 (24%), Positives = 94/215 (43%)
Query: 121 HTDSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
H V + W++ ++ S S D+ VK+WD GK T H + + W+ H P
Sbjct: 110 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIPG 169
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
S S D+++ + D + + A A++ S W + E+ V D +++G+D+R
Sbjct: 170 CFASASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR 229
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
+ Q F L H A+ + ++P ++LA+ S D V+ W+ S S +
Sbjct: 230 NVR--------QPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPD-SLLE 280
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ + FS SP +A ++I+D
Sbjct: 281 TVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
Score = 165 (63.1 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 45/177 (25%), Positives = 82/177 (46%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNLTLEHHTDKVQAVAWNH-HSPQ 179
D + + W++ ++L + S D +++WD A AG + EH +V +V W+ Q
Sbjct: 68 DGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEH-AQEVYSVDWSQTRGEQ 126
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+++SGS+D++V + D + + + S W PH F + D T++ +D++
Sbjct: 127 LVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK 186
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQP 295
A + AH + + + NLL TG+ D ++ WDL N QP
Sbjct: 187 AAGV---------RIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQP 234
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 67/229 (29%), Positives = 96/229 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W +++
Sbjct: 271 HKGPIFALKWNKK-GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTT-- 327
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V + D + T G +V ++ WDP S +D T+K
Sbjct: 328 FASCSTDMCIHVCRLGCDRPVKTFQGH----TNEVNAIKWDPSGMLLASCS-DDMTLK-- 380
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN--------LLATGSTDKMVKLW 288
I + K D L AH K + TI ++P P +LA+ S D V+LW
Sbjct: 381 -IWSMKQDA------CVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLW 433
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D+ Q C + V+SVAFS D + LA G + IW+T S
Sbjct: 434 DME--QGVCTHTLRKHQEPVYSVAFSPDGKY-LASGSFDKCVHIWNTQS 479
Score = 118 (46.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
+LASAS D V++WD+ G C TL H + V +VA++ + L SGSFD+ V + + +
Sbjct: 420 MLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDG-KYLASGSFDKCVHIWNTQ 478
Query: 197 IST--HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ HS + + + W+ + S DG++ D+R
Sbjct: 479 SGSLVHS---YQGTGGIFEVCWNAQGD-KVGASASDGSVCVLDLR 519
Score = 43 (20.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 59 LKDREKGNFMAVGSMEPAIEIWD 81
LK +KGN++ ++ IWD
Sbjct: 278 LKWNKKGNYILSAGVDKTTIIWD 300
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 176 (67.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 68/229 (29%), Positives = 98/229 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W +++
Sbjct: 279 HKGPIFALKWNKK-GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTT-- 335
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V + D + T G +V ++ WDP S +D T+K
Sbjct: 336 FASCSTDMCIHVCRLGCDRPVKTFQGH----TNEVNAIKWDPSGMLLASCS-DDMTLK-- 388
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-----N---LLATGSTDKMVKLW 288
I + K D T L AH K + TI ++P P N +LA+ S D V+LW
Sbjct: 389 -IWSMKQD---TCVHD---LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 441
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D+ C+ + V+SVAFS D + LA G + IW+T S
Sbjct: 442 DVERGV--CLHTLTKHQEPVYSVAFSPDGKY-LASGSFDKCVHIWNTQS 487
Score = 117 (46.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
+LASAS D V++WDV G C TL H + V +VA++ + L SGSFD+ V + + +
Sbjct: 428 MLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDG-KYLASGSFDKCVHIWNTQ 486
Query: 197 IST--HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ HS + + + W+ + S DG++ D+R
Sbjct: 487 SGSLVHS---YRGTGGIFEVCWNARGD-KVGASASDGSVCVLDLR 527
Score = 43 (20.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 59 LKDREKGNFMAVGSMEPAIEIWD 81
LK +KGN++ ++ IWD
Sbjct: 286 LKWNKKGNYILSAGVDKTTIIWD 308
Score = 40 (19.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 15/56 (26%), Positives = 20/56 (35%)
Query: 28 EESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD 83
E S+GG L + H I + L G +A GS + IW D
Sbjct: 214 ENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTED 269
>FB|FBgn0262699 [details] [associations]
symbol:rap "retina aberrant in pattern" species:7227
"Drosophila melanogaster" [GO:0008054 "cyclin catabolic process"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010458
"exit from mitosis" evidence=IMP] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0031536 "positive regulation of exit from
mitosis" evidence=IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0007455 "eye-antennal disc morphogenesis"
evidence=IMP] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0005680 "anaphase-promoting complex"
evidence=IDA] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=IDA] [GO:0005814 "centriole" evidence=IDA]
[GO:0010001 "glial cell differentiation" evidence=IDA] [GO:0030424
"axon" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0030424
eggNOG:COG2319 GO:GO:0008054 GO:GO:0008347 GO:GO:0000080
GO:GO:0007455 GO:GO:0010001 GO:GO:0031536 GO:GO:0001745
HOGENOM:HOG000247776 ChiTaRS:R EMBL:Y14162
ProteinModelPortal:O18402 SMR:O18402 STRING:O18402 PRIDE:O18402
FlyBase:FBgn0262699 InParanoid:O18402 OrthoDB:EOG4C5B0M
ArrayExpress:O18402 Bgee:O18402 Uniprot:O18402
Length = 478
Score = 175 (66.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 64/217 (29%), Positives = 106/217 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
++V ++WN E N +A + V +WDVAA K L H+ +V A+AWN IL
Sbjct: 215 NTVTSVSWN-ERGNTVAVGTHHGYVTVWDVAANKQINKLNGHSARVGALAWNS---DILS 270
Query: 183 SGSFDRSVVMKDARI-STHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
SGS DR ++ +D R S + A +V L W P ++ L G G D R
Sbjct: 271 SGSRDRWIIQRDTRTPQLQSERRLAGHRQEVCGLKWSPDNQY-----LASG---GNDNRL 322
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQP-SC 297
+ S + S+T H AV I+++P LLA+G + D+ ++ W+ QP C
Sbjct: 323 YVWNQHSVNPVQSYTEHM--AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQC 380
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
+ + V ++A+S+ S +++ G S+ ++ +W
Sbjct: 381 VDT----GSQVCNLAWSKHSSELVSTHGYSQNQILVW 413
>UNIPROTKB|Q32L05 [details] [associations]
symbol:FZR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0040020 "regulation of meiosis" evidence=ISS]
[GO:0090344 "negative regulation of cell aging" evidence=IEA]
[GO:0070306 "lens fiber cell differentiation" evidence=IEA]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0005680
GO:GO:0045732 GO:GO:0031145 GO:GO:0040020 GO:GO:0031572
GO:GO:0051488 HOGENOM:HOG000195514 HOVERGEN:HBG001024 KO:K03364
GeneTree:ENSGT00580000081606 GO:GO:0070306 GO:GO:0090344 CTD:51343
OMA:KHTNELV EMBL:DAAA02019640 EMBL:BC109826 IPI:IPI00693557
RefSeq:NP_001032698.1 UniGene:Bt.87579 STRING:Q32L05
Ensembl:ENSBTAT00000044471 GeneID:530333 KEGG:bta:530333
InParanoid:Q32L05 OrthoDB:EOG4G7BZ6 NextBio:20875234 Uniprot:Q32L05
Length = 493
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 65/217 (29%), Positives = 106/217 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
DSV + W+ E N++A + V+IWD AAGK LE HT +V A+AWN + Q L
Sbjct: 230 DSVTSVGWS-ERGNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWN--ADQ-LS 285
Query: 183 SGSFDRSVVMKDARISTHSGFKWAVA--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
SGS DR ++ +D R + +V L W +H + S G G D +
Sbjct: 286 SGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWS--TDHQLLAS---G---GNDNKL 337
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQP-SC 297
+ S S +T H AV I+++P LLA+G + D+ ++ W+ QP C
Sbjct: 338 LVWNHSSLSPVQQYTEHL--AAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQC 395
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
I + V ++A+S+ + +++ G S+ ++ +W
Sbjct: 396 IDT----GSQVCNLAWSKHANELVSTHGYSQNQILVW 428
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V GL W+ + + +LAS D ++ +W+ ++ H V+A+AW+ H +
Sbjct: 312 HRQEVCGLKWSTDHQ-LLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGL 370
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWA-VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L SG ++ T + + V +LAW HA +VS G + I
Sbjct: 371 LASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANE--LVSTH-GYSQN-QIL 426
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
K P S +Q + T H++ V ++ +P + TG+ D+ ++ W++
Sbjct: 427 VWKY-P-SLTQVAKLTGHSY--RVLYLAMSP-DGEAIVTGAGDETLRFWNV 472
Score = 56 (24.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 63 EKGNFMAVGSMEPAIEIWD 81
E+GN +AVG+ + ++IWD
Sbjct: 239 ERGNLVAVGTHKGFVQIWD 257
>UNIPROTKB|Q5H7B9 [details] [associations]
symbol:FZR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0040020 "regulation of meiosis" evidence=ISS]
[GO:0090344 "negative regulation of cell aging" evidence=IEA]
[GO:0070306 "lens fiber cell differentiation" evidence=IEA]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0040020 HOGENOM:HOG000195514
HOVERGEN:HBG001024 KO:K03364 GeneTree:ENSGT00580000081606 CTD:51343
EMBL:FP016022 OrthoDB:EOG4G7BZ6 EMBL:AB192874 RefSeq:NP_001012296.1
UniGene:Ssc.15894 UniGene:Ssc.84987 STRING:Q5H7B9
Ensembl:ENSSSCT00000014727 GeneID:497234 KEGG:ssc:497234
OMA:WACHARW Uniprot:Q5H7B9
Length = 493
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 65/217 (29%), Positives = 106/217 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
DSV + W+ E N++A + V+IWD AAGK LE HT +V A+AWN + Q L
Sbjct: 230 DSVTSVGWS-ERGNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWN--ADQ-LS 285
Query: 183 SGSFDRSVVMKDARISTHSGFKWAVA--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
SGS DR ++ +D R + +V L W +H + S G G D +
Sbjct: 286 SGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWS--TDHQLLAS---G---GNDNKL 337
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQP-SC 297
+ S S +T H AV I+++P LLA+G + D+ ++ W+ QP C
Sbjct: 338 LVWNHSSLSPVQQYTEHL--AAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQC 395
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
I + V ++A+S+ + +++ G S+ ++ +W
Sbjct: 396 IDT----GSQVCNLAWSKHANELVSTHGYSQNQILVW 428
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V GL W+ + + +LAS D ++ +W+ ++ H V+A+AW+ H +
Sbjct: 312 HRQEVCGLKWSTDHQ-LLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGL 370
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWA-VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L SG ++ T + + V +LAW HA +VS G + I
Sbjct: 371 LASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANE--LVSTH-GYSQN-QIL 426
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
K P S +Q + T H++ V ++ +P + TG+ D+ ++ W++
Sbjct: 427 VWKY-P-SLTQVAKLTGHSY--RVLYLAMSP-DGEAIVTGAGDETLRFWNV 472
Score = 56 (24.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 63 EKGNFMAVGSMEPAIEIWD 81
E+GN +AVG+ + ++IWD
Sbjct: 239 ERGNLVAVGTHKGFVQIWD 257
>MGI|MGI:1926790 [details] [associations]
symbol:Fzr1 "fizzy/cell division cycle 20 related 1
(Drosophila)" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0031572 "G2 DNA damage checkpoint"
evidence=ISO] [GO:0040020 "regulation of meiosis" evidence=IDA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA] [GO:0051488
"activation of anaphase-promoting complex activity" evidence=ISO]
[GO:0070306 "lens fiber cell differentiation" evidence=IMP]
[GO:0090344 "negative regulation of cell aging" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1926790 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
GO:GO:0016567 GO:GO:0005680 GO:GO:0045732 GO:GO:0031145
GO:GO:0040020 GO:GO:0031572 GO:GO:0051488 HOGENOM:HOG000195514
HOVERGEN:HBG001024 KO:K03364 GeneTree:ENSGT00580000081606
GO:GO:0070306 GO:GO:0090344 CTD:51343 OMA:KHTNELV ChiTaRS:FZR1
EMBL:AF083809 EMBL:BC006616 IPI:IPI00128734 RefSeq:NP_062731.1
UniGene:Mm.24202 ProteinModelPortal:Q9R1K5 SMR:Q9R1K5 IntAct:Q9R1K5
STRING:Q9R1K5 PhosphoSite:Q9R1K5 PRIDE:Q9R1K5
Ensembl:ENSMUST00000140901 GeneID:56371 KEGG:mmu:56371
InParanoid:Q9R1K5 NextBio:312424 Bgee:Q9R1K5 Genevestigator:Q9R1K5
GermOnline:ENSMUSG00000020235 Uniprot:Q9R1K5
Length = 493
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 65/217 (29%), Positives = 106/217 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
DSV + W+ E N++A + V+IWD AAGK LE HT +V A+AWN + Q L
Sbjct: 230 DSVTSVGWS-ERGNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWN--ADQ-LS 285
Query: 183 SGSFDRSVVMKDARISTHSGFKWAVA--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
SGS DR ++ +D R + +V L W +H + S G G D +
Sbjct: 286 SGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWS--TDHQLLAS---G---GNDNKL 337
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQP-SC 297
+ S S +T H AV I+++P LLA+G + D+ ++ W+ QP C
Sbjct: 338 LVWNHSSLSPVQQYTEHL--AAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQC 395
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
I + V ++A+S+ + +++ G S+ ++ +W
Sbjct: 396 IDT----GSQVCNLAWSKHANELVSTHGYSQNQILVW 428
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V GL W+ + + +LAS D ++ +W+ ++ H V+A+AW+ H +
Sbjct: 312 HRQEVCGLKWSTDHQ-LLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGL 370
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWA-VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L SG ++ T + + V +LAW HA +VS G + I
Sbjct: 371 LASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANE--LVSTH-GYSQN-QIL 426
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
K P S +Q + T H++ V ++ +P + TG+ D+ ++ W++
Sbjct: 427 VWKY-P-SLTQVAKLTGHSY--RVLYLAMSP-DGEAIVTGAGDETLRFWNV 472
Score = 56 (24.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 63 EKGNFMAVGSMEPAIEIWD 81
E+GN +AVG+ + ++IWD
Sbjct: 239 ERGNLVAVGTHKGFVQIWD 257
>UNIPROTKB|Q9UM11 [details] [associations]
symbol:FZR1 "Fizzy-related protein homolog" species:9606
"Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0040020 "regulation of meiosis" evidence=IEA]
[GO:0070306 "lens fiber cell differentiation" evidence=IEA]
[GO:0090344 "negative regulation of cell aging" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051488 "activation
of anaphase-promoting complex activity" evidence=IDA] [GO:0031572
"G2 DNA damage checkpoint" evidence=IDA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;TAS]
[GO:0070979 "protein K11-linked ubiquitination" evidence=TAS]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IGI]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 GO:GO:0031965
eggNOG:COG2319 GO:GO:0051436 GO:GO:0045732 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 GO:GO:0070979 GO:GO:0040020
GO:GO:0031572 CleanEx:HS_CDH1 GO:GO:0051488 Reactome:REACT_383
HOVERGEN:HBG001024 KO:K03364 GO:GO:0070306 GO:GO:0090344
EMBL:AF102508 EMBL:AF102507 EMBL:AB013462 EMBL:AB013463
EMBL:AF080397 EMBL:AF083810 EMBL:AF433157 EMBL:BT007115
EMBL:AC005787 EMBL:AC005786 EMBL:AB033068 EMBL:BC013413
IPI:IPI00043958 IPI:IPI00099464 IPI:IPI00383919
RefSeq:NP_001129669.1 RefSeq:NP_001129670.1 RefSeq:NP_057347.2
UniGene:Hs.413133 ProteinModelPortal:Q9UM11 SMR:Q9UM11
DIP:DIP-38700N IntAct:Q9UM11 MINT:MINT-1415280 STRING:Q9UM11
PhosphoSite:Q9UM11 DMDM:37537753 PRIDE:Q9UM11 DNASU:51343
Ensembl:ENST00000313639 Ensembl:ENST00000395095
Ensembl:ENST00000441788 GeneID:51343 KEGG:hsa:51343 UCSC:uc002lxt.2
UCSC:uc002lxv.2 UCSC:uc010dtk.2 CTD:51343 GeneCards:GC19P003506
HGNC:HGNC:24824 HPA:HPA043536 MIM:603619 neXtProt:NX_Q9UM11
PharmGKB:PA134896003 InParanoid:Q9UM11 OMA:KHTNELV ChiTaRS:FZR1
GenomeRNAi:51343 NextBio:54790 Bgee:Q9UM11 Genevestigator:Q9UM11
GermOnline:ENSG00000105325 Uniprot:Q9UM11
Length = 496
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 64/217 (29%), Positives = 104/217 (47%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
DSV + W+ E N++A + V+IWD AAGK LE HT +V A+AWN L
Sbjct: 230 DSVTSVGWS-ERGNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNAEQ---LS 285
Query: 183 SGSFDRSVVMKDARISTHSGFKWAVA--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
SGS DR ++ +D R + +V L W +H + S G G D +
Sbjct: 286 SGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWS--TDHQLLAS---G---GNDNKL 337
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQP-SC 297
+ S S +T H AV I+++P LLA+G + D+ ++ W+ QP C
Sbjct: 338 LVWNHSSLSPVQQYTEHL--AAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQC 395
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
I + V ++A+S+ + +++ G S+ ++ +W
Sbjct: 396 IDT----GSQVCNLAWSKHANELVSTHGYSQNQILVW 428
Score = 110 (43.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 57/225 (25%), Positives = 94/225 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSP 178
HT V LAWN E L+S S D+ + D+ + L+ H +V + W+
Sbjct: 270 HTARVGALAWNAEQ---LSSGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDH- 325
Query: 179 QILLSGSFDRSV-VMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFD 237
Q+L SG D + V + +S + +AA V+++AW PH +H + S GT
Sbjct: 326 QLLASGGNDNKLLVWNHSSLSPVQQYTEHLAA-VKAIAWSPH-QHGLLAS-GGGTAD--- 379
Query: 238 IRTAKSDPDSTSQQSSFTLHAHDKA--VCTISYNPLVPNLLAT-GSTDKMVKLWDLSNNQ 294
R + T Q L D VC ++++ L++T G + + +W
Sbjct: 380 -RCIRFWNTLTGQP----LQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVW----KY 430
Query: 295 PSC--IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
PS +A + V +A S D ++ G + L W+ S
Sbjct: 431 PSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE-TLRFWNVFS 474
Score = 56 (24.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 63 EKGNFMAVGSMEPAIEIWD 81
E+GN +AVG+ + ++IWD
Sbjct: 239 ERGNLVAVGTHKGFVQIWD 257
>UNIPROTKB|E2R4Z3 [details] [associations]
symbol:FZR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090344 "negative regulation of cell aging"
evidence=IEA] [GO:0070306 "lens fiber cell differentiation"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0040020 "regulation of
meiosis" evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0005680 GO:GO:0045732
GO:GO:0031145 GO:GO:0040020 GO:GO:0031572 GO:GO:0051488 KO:K03364
GeneTree:ENSGT00580000081606 GO:GO:0070306 GO:GO:0090344 CTD:51343
OMA:KHTNELV EMBL:AAEX03012579 RefSeq:XP_542177.3
ProteinModelPortal:E2R4Z3 Ensembl:ENSCAFT00000030508 GeneID:485059
KEGG:cfa:485059 NextBio:20859124 Uniprot:E2R4Z3
Length = 496
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 65/217 (29%), Positives = 106/217 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
DSV + W+ E N++A + V+IWD AAGK LE HT +V A+AWN + Q L
Sbjct: 230 DSVTSVGWS-ERGNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWN--ADQ-LS 285
Query: 183 SGSFDRSVVMKDARISTHSGFKWAVA--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
SGS DR ++ +D R + +V L W +H + S G G D +
Sbjct: 286 SGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWS--TDHQLLAS---G---GNDNKL 337
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQP-SC 297
+ S S +T H AV I+++P LLA+G + D+ ++ W+ QP C
Sbjct: 338 LVWNHSSLSPVQQYTEHL--AAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQC 395
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
I + V ++A+S+ + +++ G S+ ++ +W
Sbjct: 396 IDT----GSQVCNLAWSKHANELVSTHGYSQNQILVW 428
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V GL W+ + + +LAS D ++ +W+ ++ H V+A+AW+ H +
Sbjct: 312 HRQEVCGLKWSTDHQ-LLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGL 370
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWA-VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L SG ++ T + + V +LAW HA +VS G + I
Sbjct: 371 LASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANE--LVSTH-GYSQN-QIL 426
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
K P S +Q + T H++ V ++ +P + TG+ D+ ++ W++
Sbjct: 427 VWKY-P-SLTQVAKLTGHSY--RVLYLAMSP-DGEAIVTGAGDETLRFWNV 472
Score = 56 (24.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 63 EKGNFMAVGSMEPAIEIWD 81
E+GN +AVG+ + ++IWD
Sbjct: 239 ERGNLVAVGTHKGFVQIWD 257
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 178 (67.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 60/215 (27%), Positives = 96/215 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D++ L ++ + + I+ A D ++K+WD+ +G C +T HT V + ++ +
Sbjct: 338 HYDALSTLQYSSDGQRIITGAD-DGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRG-NV 395
Query: 181 LLSGSFDRSVVMKDA-RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L S S D SV D R F +A DP E S + I + ++
Sbjct: 396 LFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQ 455
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
T Q TL H+ V ++S+N +LLA+GS DK V++WD+ + S I
Sbjct: 456 TG---------QLLETLAGHEGPVSSLSFNSS-GSLLASGSWDKTVRIWDIFSR--SGIV 503
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
P V S+AF D V + G+L W+
Sbjct: 504 EPLPIPSDVLSLAFHPDGKEV-CVASLDGQLTFWN 537
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 173 (66.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 55/209 (26%), Positives = 100/209 (47%)
Query: 141 ASADKQVKIWDVA--AGKCNLTLEHHT--DKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
A++ Q+ I+D++ + + TL T D + +VA+N +L S DRS+++ D R
Sbjct: 169 AASSSQISIYDLSRPSSTPSQTLHWPTSVDTITSVAFNQTETSVLASTGIDRSIILYDLR 228
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL 256
S+ K + +++W+P +F V+ ED + FD+R ++ L
Sbjct: 229 TSSPLS-KLVLKLASNAVSWNPMEAFNFAVANEDHNVYMFDMRKMN--------RALNVL 279
Query: 257 HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 316
H AV + ++P L+ T S D+ ++LW+ + I + VFS F+ D
Sbjct: 280 KDHVAAVMDVDFSPTGEELV-TASYDRTIRLWNRATGHSRDIY-HTQRMQRVFSAKFTPD 337
Query: 317 SPFVLAIGGSKGKLEIWDT-LSD-AGISN 343
+ +VL+ G G + +W SD +GI +
Sbjct: 338 NKYVLS-GSDDGNIRLWRANASDRSGIKS 365
Score = 39 (18.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 69 AVGSMEPAIEIWDLDVIDEV 88
A GS + +++WDL EV
Sbjct: 83 ASGSGDGVVKVWDLVTQGEV 102
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 157 (60.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 54/207 (26%), Positives = 87/207 (42%)
Query: 147 VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA 206
+++WDV K L D V V +N I+ S D S+V+ D R +T K
Sbjct: 201 IQLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASSGSDNSIVLYDIRTNTPV-HKVV 259
Query: 207 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 266
+ + W+P +F ED +D+R Q++ H A+ +
Sbjct: 260 TSLRNNCITWNPMEAFNFATGNEDHNGYLYDMRNL--------QKTLKVYKGHVGAIMDV 311
Query: 267 SYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS 326
+ P L+ TGS DK ++LW + + + + VFSV +S DS ++++ G
Sbjct: 312 DFAPTGQELV-TGSYDKTIRLWKTLDGRSKDVY-HTKRMQKVFSVKYSTDSKYIIS-GSD 368
Query: 327 KGKLEIWDTLSDAGI-SNRFSKYSKPK 352
L +W SDA SN S + K
Sbjct: 369 DTNLRVWR--SDASSRSNIKSSRQRAK 393
Score = 57 (25.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV 152
H D V +A N + N +AS S D +K W++
Sbjct: 66 HRDGVYFIAKNYQATNQIASGSGDGIIKYWNL 97
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 157 (60.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 54/207 (26%), Positives = 87/207 (42%)
Query: 147 VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA 206
+++WDV K L D V V +N I+ S D S+V+ D R +T K
Sbjct: 201 IQLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASSGSDNSIVLYDIRTNTPV-HKVV 259
Query: 207 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 266
+ + W+P +F ED +D+R Q++ H A+ +
Sbjct: 260 TSLRNNCITWNPMEAFNFATGNEDHNGYLYDMRNL--------QKTLKVYKGHVGAIMDV 311
Query: 267 SYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS 326
+ P L+ TGS DK ++LW + + + + VFSV +S DS ++++ G
Sbjct: 312 DFAPTGQELV-TGSYDKTIRLWKTLDGRSKDVY-HTKRMQKVFSVKYSTDSKYIIS-GSD 368
Query: 327 KGKLEIWDTLSDAGI-SNRFSKYSKPK 352
L +W SDA SN S + K
Sbjct: 369 DTNLRVWR--SDASSRSNIKSSRQRAK 393
Score = 57 (25.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV 152
H D V +A N + N +AS S D +K W++
Sbjct: 66 HRDGVYFIAKNYQATNQIASGSGDGIIKYWNL 97
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 169 (64.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 67/210 (31%), Positives = 100/210 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +AW+ + N+L SAS DK +KIWDV++GKC TL+ H++ V +N S +
Sbjct: 60 HKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NL 117
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++SGSFD SV + D + T K A A + + S +VS DG + +D
Sbjct: 118 IVSGSFDESVRIWD--VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-- 173
Query: 240 TAKSDPDSTSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDLSN------ 292
TA S Q TL D V + ++P +LA + D +KLWD S
Sbjct: 174 TA-------SGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKT 225
Query: 293 -----NQPSCIASRNPKAGAVFSVAFSEDS 317
N+ CI + G + V+ SED+
Sbjct: 226 YTGHKNEKYCIFANFSVTGGKWIVSGSEDN 255
Score = 155 (59.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H++ V +N + N++ S S D+ V+IWDV GKC TL H+D V AV +N +
Sbjct: 102 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG-SL 159
Query: 181 LLSGSFDRSVVMKDARISTHSG--FKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKG 235
++S S+D + D T SG K + D V + + P+ ++ +L D T+K
Sbjct: 160 IVSSSYDGLCRIWD----TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKL 214
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D K ++T H ++K +++ + +GS D +V +W+L +
Sbjct: 215 WDYSKGKC-------LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 266
Score = 155 (59.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 58/217 (26%), Positives = 102/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + ++ LAS+SADK +KIW GK T+ H + VAW+ S +
Sbjct: 18 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NL 75
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
L+S S D+++ + D +S+ K + + + + +VS D +++ +D++
Sbjct: 76 LVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 133
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T K TL AH V + +N +L+ + S D + ++WD ++ Q +
Sbjct: 134 TGKCLK---------TLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 183
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
I NP V V FS + ++LA L++WD
Sbjct: 184 IDDDNPP---VSFVKFSPNGKYILA-ATLDNTLKLWD 216
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 169 (64.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 47/193 (24%), Positives = 92/193 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V +AW+ + S DK++ IWD+ ++ H+ +V +A+N +S I
Sbjct: 221 HESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFI 280
Query: 181 LLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFD 237
L +GS D++V + D R + HS F+ + ++ + W PH E S D + +D
Sbjct: 281 LATGSADKTVALWDLRNLRLKLHS-FE-SHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Query: 238 IRTAKSDPDSTSQQSS------FTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
+ +K D T++ + +H H + S+NP P ++ + S D ++++W +
Sbjct: 339 L--SKIGEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Query: 291 SNNQPSCIASRNP 303
++N + + P
Sbjct: 397 ADNIYNDVEDETP 409
Score = 161 (61.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 49/178 (27%), Positives = 83/178 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AG-----KCNLTLEHHTDKVQAVAW 173
HT GL+WN ++ SAS D+ V WD+ AG K + H V+ VAW
Sbjct: 171 HTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAW 230
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTI 233
+ + S D+ +++ D R + A +A+V LA++P++E D T+
Sbjct: 231 HVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTV 290
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291
+D+R + + SF H + + + ++P +LA+ TDK + +WDLS
Sbjct: 291 ALWDLRNLRL------KLHSFESHRDE--IFQVQWSPHNETILASSGTDKRLHVWDLS 340
Score = 161 (61.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 58/193 (30%), Positives = 91/193 (47%)
Query: 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAAD-------- 210
L L+ HT + ++WN + ++LS S D++V D I+ ++G + A
Sbjct: 166 LKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD--INGNAGANGELKAREIFKGHES 223
Query: 211 -VESLAWDPHAEHSFVVSL--EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTIS 267
VE +AW H H V +D + +D+RT + P + AH V ++
Sbjct: 224 VVEDVAW--HVLHDGVFGSVGDDKKLLIWDLRT--NVP-------GHAIDAHSAEVNCLA 272
Query: 268 YNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK 327
+NP +LATGS DK V LWDL N + + S +F V +S + +LA G+
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRLK-LHSFESHRDEIFQVQWSPHNETILASSGTD 331
Query: 328 GKLEIWDTLSDAG 340
+L +WD LS G
Sbjct: 332 KRLHVWD-LSKIG 343
Score = 42 (19.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 41 HHIIIP--AFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78
+H++I P A D D E+G F G++ +E
Sbjct: 73 NHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVE 112
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 63/219 (28%), Positives = 107/219 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H S+ + ++ + + LASASADK +KIW GK TLE H + + +AW+ S ++
Sbjct: 45 HLKSISSVKFSPDGK-WLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS-KL 102
Query: 181 LLSGSFDRSVVMKDAR----ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKG 235
+ S S D+++ + D + T G K V ++++P + + +VS D ++
Sbjct: 103 ICSASDDKTIKIWDVESGKMVKTLKGHKEYVFG----VSFNPQS--NLIVSGSFDENVRI 156
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
+D+ T + T S AH V + +N L+ +GS D V++WD + Q
Sbjct: 157 WDVNTG----ECTKMIS-----AHSDPVTGVHFNR-DGTLVVSGSYDGTVRIWDTTTGQL 206
Query: 296 -SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+ I++ + K V V FS + FVLA G L +W
Sbjct: 207 LNTISTEDGKE--VSFVKFSPNGKFVLA-GTLDNTLRLW 242
Score = 144 (55.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 40/175 (22%), Positives = 83/175 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + V G+++N + N++ S S D+ V+IWDV G+C + H+D V V +N +
Sbjct: 129 HKEYVFGVSFNPQ-SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGT-L 186
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
++SGS+D +V + D + +V + + P+ + +L D T++ +
Sbjct: 187 VVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTL-DNTLRLWSYN 245
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
K ++T H ++K +++ + TGS D ++ +++L +
Sbjct: 246 NNKKC------LKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTRE 294
Score = 133 (51.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 45/176 (25%), Positives = 80/176 (45%)
Query: 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPH 219
TL+ H + +V ++ + L S S D+++ + A + +AW
Sbjct: 41 TLKGHLKSISSVKFSPDG-KWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQD 99
Query: 220 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 279
++ S +D TIK +D+ + K TL H + V +S+NP NL+ +G
Sbjct: 100 SKLICSAS-DDKTIKIWDVESGKMVK---------TLKGHKEYVFGVSFNPQ-SNLIVSG 148
Query: 280 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
S D+ V++WD++ + C + + V V F+ D V++ G G + IWDT
Sbjct: 149 SFDENVRIWDVNTGE--CTKMISAHSDPVTGVHFNRDGTLVVS-GSYDGTVRIWDT 201
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 177 (67.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 62/203 (30%), Positives = 96/203 (47%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAW--NHHSPQILLSGSFDRSVVMKD 194
+LA+ + D +VK+W+V +G C +T HT+ V A+ + ++HS LLS S D +V D
Sbjct: 403 LLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS---LLSASLDGTVRAWD 459
Query: 195 -ARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS 253
R + + SL DP + VV GT+ F+I T Q
Sbjct: 460 FKRYKNYKTYTTPTPRQFVSLTADPSGD---VVCA--GTLDSFEIFVWSK---KTGQIKD 511
Query: 254 FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF 313
L H+ V + ++PL LLA+ S D V+LWD+ ++ + R+ V +VAF
Sbjct: 512 I-LSGHEAPVHGLMFSPLT-QLLASSSWDYTVRLWDVFASKGTVETFRHNHD--VLTVAF 567
Query: 314 SEDSPFVLAIGGSKGKLEIWDTL 336
D LA G++ WDT+
Sbjct: 568 RPDGK-QLASSTLDGQINFWDTI 589
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 176 (67.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 50/166 (30%), Positives = 82/166 (49%)
Query: 128 LAWNKEFRNILASASADKQVKIWDVAA-GKCN--LTLEHHTDKVQAVAWNHHSPQILLSG 184
+AW+ N+LA+A+ + V +WD++ G+ L H V ++ P IL+SG
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 185 SFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSD 244
S D ++ D R + + V + + PH ++ F E+GT++ +D+R
Sbjct: 131 SQDGTIKCFDIRSDKSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKW--- 187
Query: 245 PDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
D Q FT AH V T ++P N LATGS DK +K+W++
Sbjct: 188 -DKCMVQ--FT--AHYGPVYTCDWHP-TRNWLATGSRDKQIKVWNM 227
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 169 (64.5 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/210 (31%), Positives = 100/210 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +AW+ + N+L SAS DK +KIWDV++GKC TL+ H++ V +N S +
Sbjct: 86 HKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NL 143
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++SGSFD SV + D + T K A A + + S +VS DG + +D
Sbjct: 144 IVSGSFDESVRIWD--VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-- 199
Query: 240 TAKSDPDSTSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDLSN------ 292
TA S Q TL D V + ++P +LA + D +KLWD S
Sbjct: 200 TA-------SGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKT 251
Query: 293 -----NQPSCIASRNPKAGAVFSVAFSEDS 317
N+ CI + G + V+ SED+
Sbjct: 252 YTCHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Score = 158 (60.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H++ V +N + N++ S S D+ V+IWDV GKC TL H+D V AV +N +
Sbjct: 128 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG-SL 185
Query: 181 LLSGSFDRSVVMKDARISTHSG--FKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKG 235
++S S+D + D T SG K + D V + + P+ ++ +L D T+K
Sbjct: 186 IVSSSYDGLCRIWD----TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKL 240
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D K ++T H ++K +++ + +GS D +V +W+L +
Sbjct: 241 WDYSKGKC-------LKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/217 (26%), Positives = 102/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + ++ LAS+SADK +KIW GK T+ H + VAW+ S +
Sbjct: 44 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NL 101
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
L+S S D+++ + D +S+ K + + + + +VS D +++ +D++
Sbjct: 102 LVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T K TL AH V + +N +L+ + S D + ++WD ++ Q +
Sbjct: 160 TGKCLK---------TLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
I NP V V FS + ++LA L++WD
Sbjct: 210 IDDDNPP---VSFVKFSPNGKYILA-ATLDNTLKLWD 242
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 169 (64.5 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/210 (31%), Positives = 100/210 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +AW+ + N+L SAS DK +KIWDV++GKC TL+ H++ V +N S +
Sbjct: 86 HKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NL 143
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++SGSFD SV + D + T K A A + + S +VS DG + +D
Sbjct: 144 IVSGSFDESVRIWD--VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-- 199
Query: 240 TAKSDPDSTSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDLSN------ 292
TA S Q TL D V + ++P +LA + D +KLWD S
Sbjct: 200 TA-------SGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKT 251
Query: 293 -----NQPSCIASRNPKAGAVFSVAFSEDS 317
N+ CI + G + V+ SED+
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H++ V +N + N++ S S D+ V+IWDV GKC TL H+D V AV +N +
Sbjct: 128 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG-SL 185
Query: 181 LLSGSFDRSVVMKDARISTHSG--FKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKG 235
++S S+D + D T SG K + D V + + P+ ++ +L D T+K
Sbjct: 186 IVSSSYDGLCRIWD----TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKL 240
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D K ++T H ++K +++ + +GS D +V +W+L +
Sbjct: 241 WDYSKGKC-------LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/217 (26%), Positives = 102/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + ++ LAS+SADK +KIW GK T+ H + VAW+ S +
Sbjct: 44 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NL 101
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
L+S S D+++ + D +S+ K + + + + +VS D +++ +D++
Sbjct: 102 LVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T K TL AH V + +N +L+ + S D + ++WD ++ Q +
Sbjct: 160 TGKCLK---------TLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
I NP V V FS + ++LA L++WD
Sbjct: 210 IDDDNPP---VSFVKFSPNGKYILA-ATLDNTLKLWD 242
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 169 (64.5 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/210 (31%), Positives = 100/210 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +AW+ + N+L SAS DK +KIWDV++GKC TL+ H++ V +N S +
Sbjct: 86 HKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NL 143
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++SGSFD SV + D + T K A A + + S +VS DG + +D
Sbjct: 144 IVSGSFDESVRIWD--VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-- 199
Query: 240 TAKSDPDSTSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDLSN------ 292
TA S Q TL D V + ++P +LA + D +KLWD S
Sbjct: 200 TA-------SGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKT 251
Query: 293 -----NQPSCIASRNPKAGAVFSVAFSEDS 317
N+ CI + G + V+ SED+
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H++ V +N + N++ S S D+ V+IWDV GKC TL H+D V AV +N +
Sbjct: 128 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG-SL 185
Query: 181 LLSGSFDRSVVMKDARISTHSG--FKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKG 235
++S S+D + D T SG K + D V + + P+ ++ +L D T+K
Sbjct: 186 IVSSSYDGLCRIWD----TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKL 240
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D K ++T H ++K +++ + +GS D +V +W+L +
Sbjct: 241 WDYSKGKC-------LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/217 (26%), Positives = 102/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + ++ LAS+SADK +KIW GK T+ H + VAW+ S +
Sbjct: 44 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NL 101
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
L+S S D+++ + D +S+ K + + + + +VS D +++ +D++
Sbjct: 102 LVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T K TL AH V + +N +L+ + S D + ++WD ++ Q +
Sbjct: 160 TGKCLK---------TLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
I NP V V FS + ++LA L++WD
Sbjct: 210 IDDDNPP---VSFVKFSPNGKYILA-ATLDNTLKLWD 242
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 169 (64.5 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/210 (31%), Positives = 100/210 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +AW+ + N+L SAS DK +KIWDV++GKC TL+ H++ V +N S +
Sbjct: 86 HKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NL 143
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++SGSFD SV + D + T K A A + + S +VS DG + +D
Sbjct: 144 IVSGSFDESVRIWD--VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-- 199
Query: 240 TAKSDPDSTSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDLSN------ 292
TA S Q TL D V + ++P +LA + D +KLWD S
Sbjct: 200 TA-------SGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKT 251
Query: 293 -----NQPSCIASRNPKAGAVFSVAFSEDS 317
N+ CI + G + V+ SED+
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H++ V +N + N++ S S D+ V+IWDV GKC TL H+D V AV +N +
Sbjct: 128 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG-SL 185
Query: 181 LLSGSFDRSVVMKDARISTHSG--FKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKG 235
++S S+D + D T SG K + D V + + P+ ++ +L D T+K
Sbjct: 186 IVSSSYDGLCRIWD----TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKL 240
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D K ++T H ++K +++ + +GS D +V +W+L +
Sbjct: 241 WDYSKGKC-------LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/217 (26%), Positives = 102/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + ++ LAS+SADK +KIW GK T+ H + VAW+ S +
Sbjct: 44 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NL 101
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
L+S S D+++ + D +S+ K + + + + +VS D +++ +D++
Sbjct: 102 LVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T K TL AH V + +N +L+ + S D + ++WD ++ Q +
Sbjct: 160 TGKCLK---------TLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
I NP V V FS + ++LA L++WD
Sbjct: 210 IDDDNPP---VSFVKFSPNGKYILA-ATLDNTLKLWD 242
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 169 (64.5 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/210 (31%), Positives = 100/210 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +AW+ + N+L SAS DK +KIWDV++GKC TL+ H++ V +N S +
Sbjct: 86 HKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NL 143
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++SGSFD SV + D + T K A A + + S +VS DG + +D
Sbjct: 144 IVSGSFDESVRIWD--VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-- 199
Query: 240 TAKSDPDSTSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDLSN------ 292
TA S Q TL D V + ++P +LA + D +KLWD S
Sbjct: 200 TA-------SGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKT 251
Query: 293 -----NQPSCIASRNPKAGAVFSVAFSEDS 317
N+ CI + G + V+ SED+
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H++ V +N + N++ S S D+ V+IWDV GKC TL H+D V AV +N +
Sbjct: 128 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG-SL 185
Query: 181 LLSGSFDRSVVMKDARISTHSG--FKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKG 235
++S S+D + D T SG K + D V + + P+ ++ +L D T+K
Sbjct: 186 IVSSSYDGLCRIWD----TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKL 240
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D K ++T H ++K +++ + +GS D +V +W+L +
Sbjct: 241 WDYSKGKC-------LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/217 (26%), Positives = 102/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + ++ LAS+SADK +KIW GK T+ H + VAW+ S +
Sbjct: 44 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NL 101
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
L+S S D+++ + D +S+ K + + + + +VS D +++ +D++
Sbjct: 102 LVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T K TL AH V + +N +L+ + S D + ++WD ++ Q +
Sbjct: 160 TGKCLK---------TLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
I NP V V FS + ++LA L++WD
Sbjct: 210 IDDDNPP---VSFVKFSPNGKYILA-ATLDNTLKLWD 242
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 169 (64.5 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/210 (31%), Positives = 100/210 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +AW+ + N+L SAS DK +KIWDV++GKC TL+ H++ V +N S +
Sbjct: 86 HKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NL 143
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++SGSFD SV + D + T K A A + + S +VS DG + +D
Sbjct: 144 IVSGSFDESVRIWD--VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-- 199
Query: 240 TAKSDPDSTSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDLSN------ 292
TA S Q TL D V + ++P +LA + D +KLWD S
Sbjct: 200 TA-------SGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKT 251
Query: 293 -----NQPSCIASRNPKAGAVFSVAFSEDS 317
N+ CI + G + V+ SED+
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H++ V +N + N++ S S D+ V+IWDV GKC TL H+D V AV +N +
Sbjct: 128 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG-SL 185
Query: 181 LLSGSFDRSVVMKDARISTHSG--FKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKG 235
++S S+D + D T SG K + D V + + P+ ++ +L D T+K
Sbjct: 186 IVSSSYDGLCRIWD----TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKL 240
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D K ++T H ++K +++ + +GS D +V +W+L +
Sbjct: 241 WDYSKGKC-------LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/217 (26%), Positives = 102/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + ++ LAS+SADK +KIW GK T+ H + VAW+ S +
Sbjct: 44 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NL 101
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
L+S S D+++ + D +S+ K + + + + +VS D +++ +D++
Sbjct: 102 LVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T K TL AH V + +N +L+ + S D + ++WD ++ Q +
Sbjct: 160 TGKCLK---------TLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
I NP V V FS + ++LA L++WD
Sbjct: 210 IDDDNPP---VSFVKFSPNGKYILA-ATLDNTLKLWD 242
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 50/178 (28%), Positives = 84/178 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV-----AAGKCNL--TLEHHTDKVQAVAW 173
HT GL+WN ++ SAS D+ V WD+ AG+ + H V+ VAW
Sbjct: 171 HTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAW 230
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTI 233
+ + S D+ +++ D R ST A +A+V LA++P++E D T+
Sbjct: 231 HVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTV 290
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291
+D+R + + SF H + + + ++P +LA+ TDK + +WDLS
Sbjct: 291 ALWDLRNLRM------KLHSFESHRDE--IFQVQWSPHNETILASSGTDKRLHVWDLS 340
Score = 170 (64.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 67/224 (29%), Positives = 104/224 (46%)
Query: 136 NILASASADKQVKIWDV----AAGKCN-----LTLEHHTDKVQAVAWNHHSPQILLSGSF 186
NI+A+ S V I+D A + N + L+ HT + ++WN + ++LS S
Sbjct: 134 NIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASD 193
Query: 187 DRSVVMKDARISTH-SG-------FKWAVAADVESLAWDPHAEHSFVVSL--EDGTIKGF 236
D++V D + + +G FK + VE +AW H H V +D + +
Sbjct: 194 DQTVCHWDINANQNVAGELQAKDVFKGHESV-VEDVAW--HVLHDGVFGSVGDDKKLLIW 250
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296
D+RT S P + AH V +++NP +LATGS DK V LWDL N +
Sbjct: 251 DVRT--STP-------GHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMK 301
Query: 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340
+ S +F V +S + +LA G+ +L +WD LS G
Sbjct: 302 -LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWD-LSKIG 343
Score = 169 (64.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 45/181 (24%), Positives = 85/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V +AW+ + S DK++ IWDV ++ H+ +V +A+N +S I
Sbjct: 221 HESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFI 280
Query: 181 LLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFD 237
L +GS D++V + D R + HS F+ + ++ + W PH E S D + +D
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHS-FE-SHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Query: 238 IRTAKSDPDSTSQQSS----FTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN 292
+ D + + +H H + S+NP P ++ + S D ++++W +++
Sbjct: 339 LSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMAD 398
Query: 293 N 293
N
Sbjct: 399 N 399
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 50/178 (28%), Positives = 84/178 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV-----AAGKCNL--TLEHHTDKVQAVAW 173
HT GL+WN ++ SAS D+ V WD+ AG+ + H V+ VAW
Sbjct: 171 HTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAW 230
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTI 233
+ + S D+ +++ D R ST A +A+V LA++P++E D T+
Sbjct: 231 HVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTV 290
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291
+D+R + + SF H + + + ++P +LA+ TDK + +WDLS
Sbjct: 291 ALWDLRNLRM------KLHSFESHRDE--IFQVQWSPHNETILASSGTDKRLHVWDLS 340
Score = 170 (64.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 67/224 (29%), Positives = 104/224 (46%)
Query: 136 NILASASADKQVKIWDV----AAGKCN-----LTLEHHTDKVQAVAWNHHSPQILLSGSF 186
NI+A+ S V I+D A + N + L+ HT + ++WN + ++LS S
Sbjct: 134 NIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASD 193
Query: 187 DRSVVMKDARISTH-SG-------FKWAVAADVESLAWDPHAEHSFVVSL--EDGTIKGF 236
D++V D + + +G FK + VE +AW H H V +D + +
Sbjct: 194 DQTVCHWDINANQNVAGELQAKDVFKGHESV-VEDVAW--HVLHDGVFGSVGDDKKLLIW 250
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296
D+RT S P + AH V +++NP +LATGS DK V LWDL N +
Sbjct: 251 DVRT--STP-------GHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMK 301
Query: 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340
+ S +F V +S + +LA G+ +L +WD LS G
Sbjct: 302 -LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWD-LSKIG 343
Score = 169 (64.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 45/181 (24%), Positives = 85/181 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V +AW+ + S DK++ IWDV ++ H+ +V +A+N +S I
Sbjct: 221 HESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFI 280
Query: 181 LLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFD 237
L +GS D++V + D R + HS F+ + ++ + W PH E S D + +D
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHS-FE-SHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Query: 238 IRTAKSDPDSTSQQSS----FTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN 292
+ D + + +H H + S+NP P ++ + S D ++++W +++
Sbjct: 339 LSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMAD 398
Query: 293 N 293
N
Sbjct: 399 N 399
>POMBASE|SPAC144.13c [details] [associations]
symbol:srw1 "CDK inhibitor Srw1" species:4896
"Schizosaccharomyces pombe" [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007092 "activation of
mitotic anaphase-promoting complex activity" evidence=TAS]
[GO:0008054 "cyclin catabolic process" evidence=IMP] [GO:0030996
"cell cycle arrest in response to nitrogen starvation"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC144.13c GO:GO:0005634
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0000750 GO:GO:0008054
GO:GO:0007092 GO:GO:0045736 GO:GO:0031137 HOGENOM:HOG000195514
KO:K03364 OrthoDB:EOG43FM5B GO:GO:0030996 EMBL:AB005589
EMBL:AB001285 PIR:T37680 RefSeq:NP_594674.1
ProteinModelPortal:O13286 STRING:O13286 EnsemblFungi:SPAC144.13c.1
GeneID:2542824 KEGG:spo:SPAC144.13c OMA:PMATANL NextBio:20803866
Uniprot:O13286
Length = 556
Score = 173 (66.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 56/218 (25%), Positives = 102/218 (46%)
Query: 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQIL 181
TD+V L W + + LA + + V+IWD A K T+ HT++V A++WN H +L
Sbjct: 291 TDTVTSLRWVQRGTH-LAVGTHNGSVEIWDAATCKKTRTMSGHTERVGALSWNDH---VL 346
Query: 182 LSGSFDRSVVMKDARISTHSGFKWAVA--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
SG D ++ +D R H F+ A +V L W+ + E+ D + +D
Sbjct: 347 SSGGRDNHILHRDVRAPEHY-FRVLTAHRQEVCGLEWNSN-ENLLASGGNDNALMVWD-- 402
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSC 297
++ ++ H H AV I+++P +LA+G + D+ +KLW N Q
Sbjct: 403 -------KFEEKPLYSFHNHIAAVKAITWSPHQRGILASGGGTADRTIKLW---NTQRGS 452
Query: 298 IASRNPKAGAVFSVAFSEDS-PFVLAIGGSKGKLEIWD 334
+ V ++ +S+ + F+ G + ++ +W+
Sbjct: 453 MLHNIDTGSQVCNLLWSKQTNEFISTHGFMENEVALWN 490
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 58/256 (22%), Positives = 103/256 (40%)
Query: 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQP---------------HVILGGIDEEXXXXXXX 107
++G +AVG+ ++EIWD + + HV+ G +
Sbjct: 301 QRGTHLAVGTHNGSVEIWDAATCKKTRTMSGHTERVGALSWNDHVLSSG-GRDNHILHRD 359
Query: 108 XXXXXXXXXXXXXHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDK 167
H V GL WN N+LAS D + +WD K + +H
Sbjct: 360 VRAPEHYFRVLTAHRQEVCGLEWNSN-ENLLASGGNDNALMVWDKFEEKPLYSFHNHIAA 418
Query: 168 VQAVAWNHHSPQILLSG--SFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFV 225
V+A+ W+ H IL SG + DR++ + + + + + V +L W + F+
Sbjct: 419 VKAITWSPHQRGILASGGGTADRTIKLWNTQRGSML-HNIDTGSQVCNLLWSKQT-NEFI 476
Query: 226 VSLEDGTIKGF-DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 284
+ GF + A + S S+ TL H V ++ +P N++ TG+ D+
Sbjct: 477 ------STHGFMENEVALWNYPSVSRVG--TLKGHTDRVLYLAMSPNGENIV-TGAADET 527
Query: 285 VKLWDLSNNQPSCIAS 300
++ W L +++ AS
Sbjct: 528 LRFWKLFDSKSKHSAS 543
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 58/196 (29%), Positives = 93/196 (47%)
Query: 154 AGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-------KDARISTHSGFK 204
+G C+ L L H + ++WN + LLS S D ++ + K+ +I
Sbjct: 164 SGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIF 223
Query: 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264
A VE ++W E F +D + +D R+ ++TS+ S ++ AH V
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS-----NNTSKPSH-SVDAHTAEVN 277
Query: 265 TISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
+S+NP +LATGS DK V LWDL N + + + K +F V +S + +LA
Sbjct: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASS 336
Query: 325 GSKGKLEIWDTLSDAG 340
G+ +L +WD LS G
Sbjct: 337 GTDRRLNVWD-LSKIG 351
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 44/184 (23%), Positives = 90/184 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHS 177
HT V ++W+ ++ S + D+++ IWD + K + +++ HT +V +++N +S
Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
Query: 178 PQILLSGSFDRSVVMKDAR---ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
IL +GS D++V + D R + HS F+ + ++ + W PH E S D +
Sbjct: 286 EFILATGSADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 235 GFDI-----RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
+D+ + D + + F H + S+NP P ++ + S D ++++W
Sbjct: 344 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 47/181 (25%), Positives = 83/181 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GK---CNLTLEHHTDKVQAVAW 173
H GL+WN L SAS D + +WD++ GK HT V+ V+W
Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSW 235
Query: 174 NHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHSFVVSLED 230
+ + S + D+ +++ D R + S +V A+V L+++P++E D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 231 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+ +D+R K + SF +H + + ++P +LA+ TD+ + +WDL
Sbjct: 296 KTVALWDLRNLKL------KLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 291 S 291
S
Sbjct: 348 S 348
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 170 (64.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 46/171 (26%), Positives = 80/171 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT + GL+WN + + +L + + D V + D K + D V V W+ + +
Sbjct: 142 HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNKTTFKSDIQKDIVNDVKWHQFNGNL 201
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
S S D V + DAR + +A +++ + SLA+ P AE+ + I D+R
Sbjct: 202 FASVSEDSHVYLFDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNINLLDLR 261
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
K +S T+ H + + + ++P +LATGS D+ + +WDL
Sbjct: 262 --KLGENSGLLH---TMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDL 307
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 43/202 (21%), Positives = 84/202 (41%)
Query: 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
NI+A+ + +V ++++ HT ++WN +L++G+ D V + D
Sbjct: 114 NIVATINGLGEVDLYNLDTETRYSHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDT 173
Query: 196 RISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSF 254
+ + FK + D V + W + F ED + FD R K ++ S+
Sbjct: 174 T-TNKTTFKSDIQKDIVNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSN- 231
Query: 255 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN--NQPSCIASRNPKAGAVFSVA 312
+ +++++P NL+A G+T + L DL + + + + +
Sbjct: 232 -------GINSLAFSPFAENLVAIGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCME 284
Query: 313 FSEDSPFVLAIGGSKGKLEIWD 334
FS +LA G ++ IWD
Sbjct: 285 FSPHHDGILATGSQDRRIIIWD 306
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 170 (64.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 46/171 (26%), Positives = 80/171 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT + GL+WN + + +L + + D V + D K + D V V W+ + +
Sbjct: 142 HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNKTTFKSDIQKDIVNDVKWHQFNGNL 201
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
S S D V + DAR + +A +++ + SLA+ P AE+ + I D+R
Sbjct: 202 FASVSEDSHVYLFDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNINLLDLR 261
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
K +S T+ H + + + ++P +LATGS D+ + +WDL
Sbjct: 262 --KLGENSGLLH---TMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDL 307
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 43/202 (21%), Positives = 84/202 (41%)
Query: 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
NI+A+ + +V ++++ HT ++WN +L++G+ D V + D
Sbjct: 114 NIVATINGLGEVDLYNLDTETRYSHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDT 173
Query: 196 RISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSF 254
+ + FK + D V + W + F ED + FD R K ++ S+
Sbjct: 174 T-TNKTTFKSDIQKDIVNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSN- 231
Query: 255 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN--NQPSCIASRNPKAGAVFSVA 312
+ +++++P NL+A G+T + L DL + + + + +
Sbjct: 232 -------GINSLAFSPFAENLVAIGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCME 284
Query: 313 FSEDSPFVLAIGGSKGKLEIWD 334
FS +LA G ++ IWD
Sbjct: 285 FSPHHDGILATGSQDRRIIIWD 306
>DICTYBASE|DDB_G0285601 [details] [associations]
symbol:cdc20 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
dictyBase:DDB_G0285601 GO:GO:0005634 GO:GO:0045335 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000079 eggNOG:COG2319 GO:GO:0016567 RefSeq:XP_638150.1
ProteinModelPortal:Q54MZ3 STRING:Q54MZ3 EnsemblProtists:DDB0237885
GeneID:8625198 KEGG:ddi:DDB_G0285601 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSZ2430186 Uniprot:Q54MZ3
Length = 499
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 61/216 (28%), Positives = 98/216 (45%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D + L W K+ N LA + +++WDVA K L H +V A+AWN + IL
Sbjct: 224 DYITSLQWTKD-GNYLAVGTNSCTIQLWDVAHTKKVRELRGHAGRVGALAWNDY---ILS 279
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS D ++ D R+ H + + +V L W H D I +DI +
Sbjct: 280 SGSSDTNIFNHDVRVQNHHVSTLSGHSQEVCGLKWS-HDGGQLASGGNDNIINIWDINSE 338
Query: 242 KSD-PDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCI 298
+ P T +Q H AV +++ P PNLLATG + D+ ++ W+ C+
Sbjct: 339 NFETPAHTFEQ-------HTAAVRALAWCPFQPNLLATGGGAADRTIRFWNTITGV--CL 389
Query: 299 ASRNPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIW 333
+ + + V S+ +S V + G S+ +L +W
Sbjct: 390 NTVDTMS-QVCSIQWSTTYRELVSSHGYSQNQLCVW 424
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 169 (64.5 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 61/217 (28%), Positives = 103/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + ++ LAS+SADK +KIW GK T+ H + VAW+ S ++
Sbjct: 71 HTKAVSAVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-RL 128
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
L+SGS D++ +K +ST K + + + + +VS D +++ +D+R
Sbjct: 129 LVSGSDDKT--LKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T K TL AH V + +N +L+ + S D + ++WD ++ Q +
Sbjct: 187 TGKCLK---------TLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
I NP V V FS + ++LA L++WD
Sbjct: 237 IDDDNPP---VSFVKFSPNGKYILA-ATLDNTLKLWD 269
Score = 159 (61.0 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H++ V +N + N++ S S D+ V+IWDV GKC TL H+D V AV +N +
Sbjct: 155 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG-SL 212
Query: 181 LLSGSFDRSVVMKDARISTHSG--FKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKG 235
++S S+D + D T SG K + D V + + P+ ++ +L D T+K
Sbjct: 213 IVSSSYDGLCRIWD----TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKL 267
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D K ++T H ++K +++ + +GS D MV +W+L + +
Sbjct: 268 WDYSKGKC-------LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKE 319
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 63/210 (30%), Positives = 97/210 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +AW+ + R +L S S DK +K+W+++ GK TL+ H++ V +N S +
Sbjct: 113 HKLGISDVAWSSDSR-LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQS-NL 170
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++SGSFD SV + D R T K A A + + S +VS DG + +D
Sbjct: 171 IVSGSFDESVRIWDVR--TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-- 226
Query: 240 TAKSDPDSTSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDLSN------ 292
TA S Q TL D V + ++P +LA + D +KLWD S
Sbjct: 227 TA-------SGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKT 278
Query: 293 -----NQPSCIASRNPKAGAVFSVAFSEDS 317
N+ CI + G + V+ SED+
Sbjct: 279 YTGHKNEKYCIFANFSVTGGKWIVSGSEDN 308
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 170 (64.9 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 66/229 (28%), Positives = 96/229 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W +++
Sbjct: 275 HKGPIFALKWNKK-GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTT-- 331
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S D + V + D + T G +V ++ WDP S +D T+K
Sbjct: 332 FASCGTDMCIHVCRLGCDLPVKTFQGH----TNEVNAIKWDPSGMLLASCS-DDMTLK-- 384
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-----N---LLATGSTDKMVKLW 288
I + K D L AH K + TI ++P P N +LA+ S D V+LW
Sbjct: 385 -IWSMKQDA------CVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D+ Q C + V+S+AFS D + LA G + IW+T S
Sbjct: 438 DVE--QGVCTHTLTKHQEPVYSIAFSPDGKY-LASGSFDKCVHIWNTQS 483
Score = 119 (46.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
+LASAS D V++WDV G C TL H + V ++A++ + L SGSFD+ V + + +
Sbjct: 424 MLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDG-KYLASGSFDKCVHIWNTQ 482
Query: 197 IST--HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ HS + + + W+ + S DG++ D+R
Sbjct: 483 SGSLVHS---YQGTGGIFEVCWNARGD-KVGASASDGSVCVLDLR 523
Score = 43 (20.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 59 LKDREKGNFMAVGSMEPAIEIWD 81
LK +KGN++ ++ IWD
Sbjct: 282 LKWNKKGNYILSAGVDKTTIIWD 304
Score = 42 (19.8 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 18/60 (30%), Positives = 23/60 (38%)
Query: 28 EESDGGDPNLYVHHHIIIPAFPLCMAWLDCPL-KD------REKGNFMAVGSMEPAIEIW 80
E S+GG L + H I W D P KD G +A+GS + IW
Sbjct: 210 ENSNGGSTQLVLRHCIR-------EGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW 262
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 173 (66.0 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 62/214 (28%), Positives = 100/214 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + +N ++A S +++WD+ A K TL H + ++ + H +
Sbjct: 62 HTSAVGCIQFNSSEERVVAG-SLSGSLRLWDLEAAKILRTLMGHKASISSLDF-HPMGEY 119
Query: 181 LLSGSFDRSVVMKDARIS-THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L SGS D ++ + D R +K A V LA+ P + S +D T+K +D+
Sbjct: 120 LASGSVDSNIKLWDVRRKGCVFRYKGHTQA-VRCLAFSPDGKWLASAS-DDSTVKLWDLI 177
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
K + TS H AV + ++P LLA+GS D+ VKLWDL + I
Sbjct: 178 AGKMITEFTS---------HTSAVNVVQFHPN-EYLLASGSADRTVKLWDLEKF--NMIG 225
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
S + G V SV F+ D + + GS+ L ++
Sbjct: 226 SSEGETGVVRSVLFNPDGSCLYS--GSENTLRVY 257
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 63/218 (28%), Positives = 101/218 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ +V L K +LA+ D +V IW V+ C ++L HT V + +N S +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNS-SEER 77
Query: 181 LLSGSFDRSVVMKD---ARI-STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
+++GS S+ + D A+I T G K A + SL + P E+ S+ D IK +
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHK----ASISSLDFHPMGEYLASGSV-DSNIKLW 132
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296
D+R + F H +AV ++++P LA+ S D VKLWDL +
Sbjct: 133 DVRR---------KGCVFRYKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWDLIAGK-- 180
Query: 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
I AV V F + ++LA G + +++WD
Sbjct: 181 MITEFTSHTSAVNVVQFHPNE-YLLASGSADRTVKLWD 217
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 170 (64.9 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 70/236 (29%), Positives = 98/236 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W S
Sbjct: 261 HKGPIFALKWNKK-GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNT 317
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V K + I T G +V ++ WDP S +D T+K
Sbjct: 318 FASCSTDMCIHVCKLGQERPIKTFQGH----TNEVNAIKWDPTGNLLASCS-DDMTLK-- 370
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-------NLLA--TGSTDKMVKL 287
+ + K D T L AH K + TI ++P P NL+ + S D V+L
Sbjct: 371 -LWSMKQD---TCVHD---LQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRL 423
Query: 288 WDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343
WD +CI + V+SVAFS D LA G + IW+T S A +++
Sbjct: 424 WDAERG--ACIHTLTKHQEPVYSVAFSPDGRH-LASGSFDKCVHIWNTQSGALVNS 476
Score = 41 (19.5 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 17/65 (26%), Positives = 23/65 (35%)
Query: 20 SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKD-REKGNFMAVGSMEPAIE 78
S ++ L ES G V H I + D D +G +A GS +
Sbjct: 187 STARIWNLSESSTGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFAR 246
Query: 79 IWDLD 83
IW D
Sbjct: 247 IWTKD 251
>WB|WBGene00044440 [details] [associations]
symbol:adpr-1 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0019915 Gene3D:1.25.40.10
EMBL:FO081821 GeneTree:ENSGT00530000062951 KO:K11807 OMA:HRYCGHC
RefSeq:NP_001021829.1 UniGene:Cel.29679 ProteinModelPortal:Q4W5Q8
SMR:Q4W5Q8 PaxDb:Q4W5Q8 EnsemblMetazoa:Y73E7A.9 GeneID:3565128
KEGG:cel:CELE_Y73E7A.9 UCSC:Y73E7A.9 CTD:3565128 WormBase:Y73E7A.9
eggNOG:NOG288984 HOGENOM:HOG000022238 InParanoid:Q4W5Q8
NextBio:955287 Uniprot:Q4W5Q8
Length = 558
Score = 171 (65.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 71/243 (29%), Positives = 110/243 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHS-PQ 179
H+ V L WNK +LAS S D+ VKIW NL H + V AV + +S Q
Sbjct: 40 HSGCVNTLRWNKTGA-LLASGSDDRNVKIWKSGREIHNLVTGHEGN-VFAVEFLQNSGDQ 97
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDI 238
L++G+ DR V + D ST KW + V+ + H F ++E D ++ FD
Sbjct: 98 KLVTGAADRVVALHDIEASTCK--KWELDGRVKRICTVEHDPTLFWAAVECDNGVQQFDT 155
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSC 297
RT +P+ + ++ HD +++ + PNL+ G + V+L+D N N P
Sbjct: 156 RT--ENPEVIIRHTA-DREFHDAK--SVAVSEARPNLIVVGFDETAVRLYDRRNLNAPML 210
Query: 298 IAS---RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW--DTLSDAGISNRF-SKYSKP 351
S N A VAF++ V+ G G + ++ D D +RF S P
Sbjct: 211 TFSPLGANTYAYHATHVAFNKRGTEVVVNHGGGGGVYVFSVDAELDPKYMDRFHSVMELP 270
Query: 352 KKP 354
++P
Sbjct: 271 REP 273
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 173 (66.0 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 71/234 (30%), Positives = 96/234 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W S
Sbjct: 265 HKGPIFALKWNKK-GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--SNNT 321
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V K D I T G +V ++ WDP S +D T+K
Sbjct: 322 FASCSTDMCIHVCKLGQDRPIKTFQGH----TNEVNAIKWDPTGNLLASCS-DDMTLK-- 374
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-------NL----LATGSTDKMV 285
I + K D L AH+K + TI ++P P NL L + S D V
Sbjct: 375 -IWSMKQD------SCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTV 427
Query: 286 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339
+LWD+ CI + V+SVAFS D + LA G + IW+T + A
Sbjct: 428 RLWDVDRG--ICIHTLTKHQEPVYSVAFSPDGRY-LASGSFDKCVHIWNTQTGA 478
Score = 37 (18.1 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 64 KGNFMAVGSMEPAIEIWDLD 83
+G +A GS + IW D
Sbjct: 236 EGTLLATGSYDGFARIWTKD 255
>UNIPROTKB|H9L1Y1 [details] [associations]
symbol:Gga.913 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IEA] [GO:0070306 "lens fiber cell differentiation"
evidence=IEA] [GO:0090344 "negative regulation of cell aging"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00580000081606 OMA:KHTNELV EMBL:AADN02056799
ProteinModelPortal:H9L1Y1 Ensembl:ENSGALT00000035693 Uniprot:H9L1Y1
Length = 503
Score = 170 (64.9 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 64/216 (29%), Positives = 104/216 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQ-VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQIL 181
DSV + W++ R L + K V+IWD AAGK LE HT +V A+AWN + Q L
Sbjct: 230 DSVTSVGWSE--RGTLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWN--ADQ-L 284
Query: 182 LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS DR ++ +D R + A S+ +H + S G G D +
Sbjct: 285 SSGSRDRMILQRDIRTPPLQSSGGSRATGRRSVG-SSGRQHQLLAS---G---GNDNKLL 337
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQP-SCI 298
+ S S +T H AV I+++P LLA+G + D+ ++ W+ QP CI
Sbjct: 338 VWNHSSLSPVQQYTEHL--AAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCI 395
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
+ V ++A+S+ + +++ G S+ ++ +W
Sbjct: 396 DT----GSQVCNLAWSKHANELVSTHGYSQNQILVW 427
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 171 (65.3 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 68/229 (29%), Positives = 96/229 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ N + SA DK IWD G+ H+ V W ++
Sbjct: 275 HKGPIFALKWNKK-GNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN--MT 331
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V + D + T G +V ++ WDP S +D T+K
Sbjct: 332 FASCSTDMCIHVCRLGCDHPVKTFQGH----TNEVNAIKWDPSGMLLASCS-DDMTLK-- 384
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-----N---LLATGSTDKMVKLW 288
I + K D L AH K + TI ++P P N +LA+ S D V+LW
Sbjct: 385 -IWSMKQDA------CVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D+ Q C + V+SVAFS D + LA G + IW+T S
Sbjct: 438 DVE--QGVCTHTLMKHQEPVYSVAFSPDGKY-LASGSFDKYVHIWNTQS 483
Score = 39 (18.8 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 14/53 (26%), Positives = 20/53 (37%)
Query: 28 EESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80
E S+GG L + H I + L G +A+GS + IW
Sbjct: 210 ENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW 262
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 167 (63.8 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 62/217 (28%), Positives = 103/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT S+ ++ L ++SADK VKIW++ C TL H V +AW+ S +
Sbjct: 86 HTKSISSAKFSP-CGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS-RC 143
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++S S D++ +K I T K + + + + S VVS D +++ +D++
Sbjct: 144 VVSASDDKT--LKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T TL AH V +S+N +L+A+GS D +V++WD +N Q +
Sbjct: 202 TGMCIK---------TLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ NP V V FS + ++LA L++WD
Sbjct: 252 VDDENPP---VAFVKFSPNGKYILA-SNLDSTLKLWD 284
Score = 142 (55.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 57/221 (25%), Positives = 100/221 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + V +N + +++ S S D+ V+IWDV G C TL H+D V AV++N +
Sbjct: 170 HNNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDG-SL 227
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKGFD 237
+ SGS+D V + D + K V + V + + P+ ++ +L D T+K +D
Sbjct: 228 IASGSYDGLVRIWDT--ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNL-DSTLKLWD 284
Query: 238 IRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ-PS 296
K T +Q +T H + K +++ + +GS D + +W+L +
Sbjct: 285 FSKGK-----TLKQ--YTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQ 337
Query: 297 CIASRNPKAGAVFSVAFSEDSPF--VLAIGGSK--GKLEIW 333
C+ G V S+ P ++A G + K+ IW
Sbjct: 338 CLE------GHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 156 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLA 215
K TLE HT + + ++ + L + S D++V + + V +A
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCG-KYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 216 WDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 274
W ++ VVS +D T+K F+I T++ TL H+ V ++NP +
Sbjct: 137 WS--SDSRCVVSASDDKTLKIFEIVTSRMTK---------TLKGHNNYVFCCNFNPQ-SS 184
Query: 275 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
L+ +GS D+ V++WD+ CI + + V +V+F+ D + A G G + IWD
Sbjct: 185 LVVSGSFDESVRIWDVKTGM--CIKTLPAHSDPVSAVSFNRDGSLI-ASGSYDGLVRIWD 241
Query: 335 T 335
T
Sbjct: 242 T 242
Score = 43 (20.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 65 GNFMAVGSMEPAIEIWDLD 83
G ++ S + ++IW++D
Sbjct: 99 GKYLGTSSADKTVKIWNMD 117
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 167 (63.8 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 62/217 (28%), Positives = 103/217 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT S+ ++ L ++SADK VKIW++ C TL H V +AW+ S +
Sbjct: 86 HTKSISSAKFSP-CGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS-RC 143
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
++S S D++ +K I T K + + + + S VVS D +++ +D++
Sbjct: 144 VVSASDDKT--LKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T TL AH V +S+N +L+A+GS D +V++WD +N Q +
Sbjct: 202 TGMCIK---------TLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ NP V V FS + ++LA L++WD
Sbjct: 252 VDDENPP---VAFVKFSPNGKYILA-SNLDSTLKLWD 284
Score = 142 (55.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 57/221 (25%), Positives = 100/221 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + V +N + +++ S S D+ V+IWDV G C TL H+D V AV++N +
Sbjct: 170 HNNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDG-SL 227
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKGFD 237
+ SGS+D V + D + K V + V + + P+ ++ +L D T+K +D
Sbjct: 228 IASGSYDGLVRIWDT--ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNL-DSTLKLWD 284
Query: 238 IRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ-PS 296
K T +Q +T H + K +++ + +GS D + +W+L +
Sbjct: 285 FSKGK-----TLKQ--YTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQ 337
Query: 297 CIASRNPKAGAVFSVAFSEDSPF--VLAIGGSK--GKLEIW 333
C+ G V S+ P ++A G + K+ IW
Sbjct: 338 CLE------GHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 156 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLA 215
K TLE HT + + ++ + L + S D++V + + V +A
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCG-KYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 216 WDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 274
W ++ VVS +D T+K F+I T++ TL H+ V ++NP +
Sbjct: 137 WS--SDSRCVVSASDDKTLKIFEIVTSRMTK---------TLKGHNNYVFCCNFNPQ-SS 184
Query: 275 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
L+ +GS D+ V++WD+ CI + + V +V+F+ D + A G G + IWD
Sbjct: 185 LVVSGSFDESVRIWDVKTGM--CIKTLPAHSDPVSAVSFNRDGSLI-ASGSYDGLVRIWD 241
Query: 335 T 335
T
Sbjct: 242 T 242
Score = 43 (20.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 65 GNFMAVGSMEPAIEIWDLD 83
G ++ S + ++IW++D
Sbjct: 99 GKYLGTSSADKTVKIWNMD 117
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 171 (65.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 52/177 (29%), Positives = 89/177 (50%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V ++W+ + ++++ S D +KIWD + + TL H V V WN + I
Sbjct: 250 HGWDVKCVSWHPQ-KSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWI 308
Query: 181 LLSGSFDRSVVMKDAR-ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ S S D+ + + D R + FK +V +LA P+ E FV +DG I + +
Sbjct: 309 V-SASSDQLLKVFDIRTMKEMQTFK-GHGKEVTALALHPYHEDLFVSGDKDGKILYWIV- 365
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296
+P+ ++ S AHD V ++S++P + ++LA+GS D K W S N+P+
Sbjct: 366 ---GNPEPQAEIHS----AHDADVWSLSWHP-IGHILASGSNDHTTKFW--SRNRPA 412
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 59/224 (26%), Positives = 99/224 (44%)
Query: 138 LASASADKQVKIWDVAAGKC---NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 194
LAS + DK +KIWD A +C N + H D V+ V+W H +++SG D ++ + D
Sbjct: 224 LASCADDKIIKIWDFA--RCTEDNQLVGHGWD-VKCVSW-HPQKSLIVSGGKDNNIKIWD 279
Query: 195 ARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSS 253
A+ S + + V + W+ + +++VS D +K FDIRT K Q
Sbjct: 280 AKSSQNITTLHGHKSTVSKVEWNQNG--NWIVSASSDQLLKVFDIRTMKE------MQ-- 329
Query: 254 FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF 313
T H K V ++ +P +L +G D + W + N +P A V+S+++
Sbjct: 330 -TFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDAD-VWSLSW 387
Query: 314 SEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSKPKKPQSV 357
+LA G + + W A KY+ P + +
Sbjct: 388 HPIG-HILASGSNDHTTKFWSRNRPADTMK--DKYNNPNASKDI 428
>ZFIN|ZDB-GENE-040426-712 [details] [associations]
symbol:fzr1 "fizzy/cell division cycle 20 related 1
(Drosophila)" species:7955 "Danio rerio" [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-712 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000195514 HOVERGEN:HBG001024
KO:K03364 GeneTree:ENSGT00580000081606 CTD:51343 OMA:KHTNELV
EMBL:CU861651 EMBL:BX004774 EMBL:BC048038 IPI:IPI00500321
RefSeq:NP_956547.1 UniGene:Dr.75885 STRING:Q7ZUP9
Ensembl:ENSDART00000015891 GeneID:393223 KEGG:dre:393223
InParanoid:Q7ZUP9 NextBio:20814287 Uniprot:Q7ZUP9
Length = 495
Score = 169 (64.5 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 63/217 (29%), Positives = 104/217 (47%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
DSV + W+ E N++A + V+IWD AGK LE HT +V A+AWN + Q L
Sbjct: 232 DSVTSVGWS-ERGNLVAVGTHKGFVQIWDATAGKKLFALEGHTARVGALAWN--ADQ-LS 287
Query: 183 SGSFDRSVVMKDARISTHSGFKWAVA--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
SGS DR ++ +D R + +V L W +H + S G G D +
Sbjct: 288 SGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWS--TDHQLLAS---G---GNDNKL 339
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQP-SC 297
+ S +T H AV I+++P LLA+G + D+ ++ W+ QP C
Sbjct: 340 LVWNHSSVLPMQQYTEHL--AAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTAQPLQC 397
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
I + V ++A+S+ + +++ G S+ ++ +W
Sbjct: 398 IDT----GSQVCNLAWSKHTNELVSTHGYSQNQILVW 430
Score = 106 (42.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 54/226 (23%), Positives = 95/226 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSP 178
HT V LAWN + L+S S D+ + D+ + L+ H +V + W+
Sbjct: 272 HTARVGALAWNADQ---LSSGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDH- 327
Query: 179 QILLSGSFDRSV-VMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVS---LEDGTIK 234
Q+L SG D + V + + + +AA V+++AW PH +H + S D I+
Sbjct: 328 QLLASGGNDNKLLVWNHSSVLPMQQYTEHLAA-VKAIAWSPH-QHGLLASGGGTADRCIR 385
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLAT-GSTDKMVKLWDLSNN 293
++ TA+ P S VC ++++ L++T G + + +W
Sbjct: 386 FWNTLTAQ--PLQCIDTGS--------QVCNLAWSKHTNELVSTHGYSQNQILVW----K 431
Query: 294 QPSC--IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
PS +A + V +A S D ++ G + L W+ S
Sbjct: 432 YPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE-TLRFWNVFS 476
Score = 56 (24.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 63 EKGNFMAVGSMEPAIEIWD 81
E+GN +AVG+ + ++IWD
Sbjct: 241 ERGNLVAVGTHKGFVQIWD 259
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 62/240 (25%), Positives = 108/240 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H DSV L W+ ++ +AS DK ++IWDV KC T+ + + + W+ Q
Sbjct: 98 HGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENIN-ICWSPDG-QT 155
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ G+ D V DA+ TH S + +V ++W+ + + F ++ +G I
Sbjct: 156 IAVGNKDDVVTFIDAK--THRSKAEEQFKFEVNEISWN-NDNNMFFLTNGNGCIN----- 207
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
S P+ QS ++AH I ++P+ ATGS D +V LWD+ ++ C+
Sbjct: 208 -ILSYPELKPVQS---INAHPSNCICIKFDPM-GKYFATGSADALVSLWDV--DELVCVR 260
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSK----GKLEIWDTLSDAGI-SNRFSKYSKPKKP 354
+ V +++FS D + + ++E D L + S F+ PK+P
Sbjct: 261 CFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRP 320
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 62/240 (25%), Positives = 108/240 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H DSV L W+ ++ +AS DK ++IWDV KC T+ + + + W+ Q
Sbjct: 98 HGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENIN-ICWSPDG-QT 155
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ G+ D V DA+ TH S + +V ++W+ + + F ++ +G I
Sbjct: 156 IAVGNKDDVVTFIDAK--THRSKAEEQFKFEVNEISWN-NDNNMFFLTNGNGCIN----- 207
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
S P+ QS ++AH I ++P+ ATGS D +V LWD+ ++ C+
Sbjct: 208 -ILSYPELKPVQS---INAHPSNCICIKFDPM-GKYFATGSADALVSLWDV--DELVCVR 260
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSK----GKLEIWDTLSDAGI-SNRFSKYSKPKKP 354
+ V +++FS D + + ++E D L + S F+ PK+P
Sbjct: 261 CFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRP 320
>UNIPROTKB|Q96J01 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IDA] [GO:0000346
"transcription export complex" evidence=IDA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
KO:K12880 GO:GO:0003723 GO:GO:0000346 GO:GO:0046784 CTD:84321
HOVERGEN:HBG059732 InterPro:IPR011659 Pfam:PF07676 EMBL:AC138965
EMBL:BC006849 EMBL:BC068499 IPI:IPI00063729 RefSeq:NP_115737.1
UniGene:Hs.484227 UniGene:Hs.715943 ProteinModelPortal:Q96J01
SMR:Q96J01 IntAct:Q96J01 STRING:Q96J01 PhosphoSite:Q96J01
DMDM:48474597 PaxDb:Q96J01 PRIDE:Q96J01 DNASU:84321
Ensembl:ENST00000265097 GeneID:84321 KEGG:hsa:84321 UCSC:uc003mdg.4
GeneCards:GC05M175344 HGNC:HGNC:19072 HPA:HPA042764 HPA:HPA044009
HPA:HPA045071 MIM:606929 neXtProt:NX_Q96J01 PharmGKB:PA134893535
HOGENOM:HOG000264781 InParanoid:Q96J01 OMA:LAYACDD
OrthoDB:EOG49ZXPJ PhylomeDB:Q96J01 ChiTaRS:THOC3 GenomeRNAi:84321
NextBio:74048 ArrayExpress:Q96J01 Bgee:Q96J01 CleanEx:HS_THOC3
Genevestigator:Q96J01 GermOnline:ENSG00000051596 Uniprot:Q96J01
Length = 351
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 62/240 (25%), Positives = 108/240 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H DSV L W+ ++ +AS DK ++IWDV KC T+ + + + W+ Q
Sbjct: 98 HGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENIN-ICWSPDG-QT 155
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ G+ D V DA+ TH S + +V ++W+ + + F ++ +G I
Sbjct: 156 IAVGNKDDVVTFIDAK--THRSKAEEQFKFEVNEISWN-NDNNMFFLTNGNGCIN----- 207
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
S P+ QS ++AH I ++P+ ATGS D +V LWD+ ++ C+
Sbjct: 208 -ILSYPELKPVQS---INAHPSNCICIKFDPM-GKYFATGSADALVSLWDV--DELVCVR 260
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSK----GKLEIWDTLSDAGI-SNRFSKYSKPKKP 354
+ V +++FS D + + ++E D L + S F+ PK+P
Sbjct: 261 CFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRP 320
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 62/240 (25%), Positives = 108/240 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H DSV L W+ ++ +AS DK ++IWDV KC T+ + + + W+ Q
Sbjct: 98 HGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENIN-ICWSPDG-QT 155
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ G+ D V DA+ TH S + +V ++W+ + + F ++ +G I
Sbjct: 156 IAVGNKDDVVTFIDAK--THRSKAEEQFKFEVNEISWN-NDNNMFFLTNGNGCIN----- 207
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
S P+ QS ++AH I ++P+ ATGS D +V LWD+ ++ C+
Sbjct: 208 -ILSYPELKPVQS---INAHPSNCICIKFDPM-GKYFATGSADALVSLWDV--DELVCVR 260
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSK----GKLEIWDTLSDAGI-SNRFSKYSKPKKP 354
+ V +++FS D + + ++E D L + S F+ PK+P
Sbjct: 261 CFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRP 320
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 62/240 (25%), Positives = 108/240 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H DSV L W+ ++ +AS DK ++IWDV KC T+ + + + W+ Q
Sbjct: 98 HGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENIN-ICWSPDG-QT 155
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ G+ D V DA+ TH S + +V ++W+ + + F ++ +G I
Sbjct: 156 IAVGNKDDVVTFIDAK--THRSKAEEQFKFEVNEISWN-NDNNMFFLTNGNGCIN----- 207
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
S P+ QS ++AH I ++P+ ATGS D +V LWD+ ++ C+
Sbjct: 208 -ILSYPELKPVQS---INAHPSNCICIKFDPM-GKYFATGSADALVSLWDV--DELVCVR 260
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSK----GKLEIWDTLSDAGI-SNRFSKYSKPKKP 354
+ V +++FS D + + ++E D L + S F+ PK+P
Sbjct: 261 CFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRP 320
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 62/240 (25%), Positives = 108/240 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H DSV L W+ ++ +AS DK ++IWDV KC T+ + + + W+ Q
Sbjct: 98 HGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENIN-ICWSPDG-QT 155
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ G+ D V DA+ TH S + +V ++W+ + + F ++ +G I
Sbjct: 156 IAVGNKDDVVTFIDAK--THRSKAEEQFKFEVNEISWN-NDNNMFFLTNGNGCIN----- 207
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
S P+ QS ++AH I ++P+ ATGS D +V LWD+ ++ C+
Sbjct: 208 -ILSYPELKPVQS---INAHPSNCICIKFDPM-GKYFATGSADALVSLWDV--DELVCVR 260
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSK----GKLEIWDTLSDAGI-SNRFSKYSKPKKP 354
+ V +++FS D + + ++E D L + S F+ PK+P
Sbjct: 261 CFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRP 320
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 168 (64.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 68/236 (28%), Positives = 108/236 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT SV + ++++ + L +AS DK VK+W V K +L HT+ V+ ++ I
Sbjct: 101 HTASVRSVHFSRDGQR-LVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLI 159
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIR 239
G DR+V + D S+H + D ++ + + S D TIK +DIR
Sbjct: 160 ASCGD-DRTVRLWDT--SSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
T K Q H+ V S++P N L +GS+D +K+ DL + I
Sbjct: 217 TNK-----LIQHYK----VHNAGVNCFSFHPS-GNYLISGSSDSTIKILDLLEGR--LIY 264
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA-GISNRFSKYSKPKKP 354
+ + G V +V FS D + A GG+ ++ +W T D+ SK+SK P
Sbjct: 265 TLHGHKGPVLTVTFSRDGD-LFASGGADSQVLMWKTNFDSLNYRELLSKHSKRVTP 319
Score = 133 (51.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 54/214 (25%), Positives = 94/214 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D + +N + LA+ S DK + IW++A HTD + V + S +
Sbjct: 17 HKDVISCADFNPNNKQ-LATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAP-SGSL 74
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ S S D++V + I S A A V S+ + + V + +D ++K + +
Sbjct: 75 VASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQR-LVTASDDKSVKVWGVER 133
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
K ++L+ H V ++P L+A+ D+ V+LWD S++Q CI
Sbjct: 134 KKF---------LYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDTSSHQ--CINI 181
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
G+ V F+ S +A G+ ++IWD
Sbjct: 182 FTDYGGSATFVDFNS-SGTCIASSGADNTIKIWD 214
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 163 (62.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 63/208 (30%), Positives = 97/208 (46%)
Query: 139 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 198
AS DK +++WDV GK + L H ++ + +N S IL SGSFD V + D R +
Sbjct: 72 ASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDS-SILASGSFDSKVRLWDCRSN 130
Query: 199 THSGFKWAVAADV-ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH 257
+ S + V AD +S++ AEH V DGT++ +DIR D S +
Sbjct: 131 SFSPIQ--VLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLSSDYFSHPITSVKT 188
Query: 258 AHDKAVCTIS-YNPLVPNLLATGSTDKMVKLW-DLSNNQPSCIASRNPKAGAVFSVAFSE 315
+ + IS N + +LL T K++K + L N + +S N VFS SE
Sbjct: 189 SKSASFSLISSLNSSI-HLLDQ-ETGKILKSYIGLKNMEYRVRSSFNQSETIVFSG--SE 244
Query: 316 DSPFVLAIGGSKGKLEIWDTLSDAGISN 343
D GK+ +WD ++ I++
Sbjct: 245 D-----------GKVYLWDLENETQITS 261
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 163 (62.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 51/179 (28%), Positives = 86/179 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+D V +N N++ S S D+ VKIW+V GKC TL H+D + AV +N + +
Sbjct: 122 HSDFVFCCDFNPP-SNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNG-SL 179
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-----VESLAWDPHAEHSFVVSLEDGTIKG 235
++SGS+D + DA SG AD V + + P+ ++ +L D T+K
Sbjct: 180 IVSGSYDGLCRIWDAA----SGQCLRTLADEGNPPVSFVKFSPNGKYILTATL-DNTLKL 234
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D + ++T H ++K S++ + +GS D MV +W+L +
Sbjct: 235 WDYSRGRC-------LKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKE 286
Score = 158 (60.7 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 65/220 (29%), Positives = 102/220 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ + +AW+ + L SAS DK +K+WD+ +GKC TL+ H+D V +N S +
Sbjct: 80 HSLEISDVAWSSDSSR-LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPS-NL 137
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
++SGSFD SV K + T K A A + + S +VS G+ G R
Sbjct: 138 IVSGSFDESV--KIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVS---GSYDGL-CRI 191
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN--LLATGSTDKMVKLWDLSNNQPSCI 298
D+ S Q TL D+ +S+ PN + T + D +KLWD S + C+
Sbjct: 192 W----DAASGQCLRTLA--DEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGR--CL 243
Query: 299 AS----RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ +N K +F+ +FS + G + IW+
Sbjct: 244 KTYTGHKNEKY-CLFA-SFSVTGRKWVVSGSEDNMVYIWN 281
Score = 147 (56.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 51/199 (25%), Positives = 94/199 (47%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
LAS++AD + IW G C TL H+ ++ VAW+ S + L+S S D+++ + D R
Sbjct: 54 LASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSR-LVSASDDKTLKVWDMR- 111
Query: 198 STHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTL 256
+ K D + + +VS D ++K ++++T K TL
Sbjct: 112 -SGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLK---------TL 161
Query: 257 HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFS-VAFSE 315
AH + +++N +L+ +GS D + ++WD ++ Q C+ + + S V FS
Sbjct: 162 SAHSDPISAVNFN-CNGSLIVSGSYDGLCRIWDAASGQ--CLRTLADEGNPPVSFVKFSP 218
Query: 316 DSPFVLAIGGSKGKLEIWD 334
+ ++L L++WD
Sbjct: 219 NGKYILT-ATLDNTLKLWD 236
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 154 (59.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 67/230 (29%), Positives = 107/230 (46%)
Query: 121 HTDSVLGL-------AWNKEFRNI-LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVA 172
HTD V GL AW+ + + LA+ +AD V +W + L LE H +V VA
Sbjct: 213 HTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVA 272
Query: 173 WNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DG 231
+ H S L+S SFD + + D H+G VE L + H+E F ++ + DG
Sbjct: 273 F-HPSGDYLVSASFDTTWRLWDV----HTG--------VELLMQEGHSEGIFSIACQPDG 319
Query: 232 TIKGFDIRTAKSDP-DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
++ A D S +S L H + + ++++P L AT S D VK+WDL
Sbjct: 320 SLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQL-ATSSADDTVKIWDL 378
Query: 291 SNNQPSCIASRNPKAGAVFS-VAFSED--SPFVLAIGGSKGKLEIWDTLS 337
+ +A P ++ S V + E + F+ A G G +++W+ L+
Sbjct: 379 ---RKVSLAHTIPAHSSLVSDVRYIESGVNRFI-ATSGYDGCVKLWNPLN 424
Score = 53 (23.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 65 GNFMAVGSMEPAIEIWDLDVIDEVQ 89
GN A GS +++W+ D + EVQ
Sbjct: 184 GNHFASGSWGGQVKVWNSDNLSEVQ 208
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 168 (64.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 64/229 (27%), Positives = 97/229 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WN++ N + SA DK IWD G+ H+ V W +++
Sbjct: 328 HKGPIFALKWNRK-GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTT-- 384
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V + D + T G +V ++ WDP S +D T+K +
Sbjct: 385 FASCSTDMCIHVCRLGCDRPVKTFQGH----TNEVNAIKWDPSGMLLASCS-DDMTLKIW 439
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-----N---LLATGSTDKMVKLW 288
++ D L AH+K + TI ++P P N +LA+ S D V+LW
Sbjct: 440 SMKQEVCIHD---------LQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 490
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D+ C + V+SVAFS D + LA G + IW+T S
Sbjct: 491 DIERGV--CTHTLTKHQEPVYSVAFSPDGKY-LASGSFDKCVHIWNTQS 536
Score = 122 (48.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 124 SVLGLAWNKEFRNI-LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
S G A + NI LASAS D V++WD+ G C TL H + V +VA++ + L
Sbjct: 463 SPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDG-KYLA 521
Query: 183 SGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
SGSFD+ V + + + S + + + + W+ + S DG++ D+R
Sbjct: 522 SGSFDKCVHIWNTQ-SGNLVHSYRGTGGIFEVCWNARGD-KVGASASDGSVCVLDLR 576
Score = 42 (19.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 59 LKDREKGNFMAVGSMEPAIEIWD 81
LK KGN++ ++ IWD
Sbjct: 335 LKWNRKGNYILSAGVDKTTIIWD 357
Score = 40 (19.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 15/56 (26%), Positives = 20/56 (35%)
Query: 28 EESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD 83
E S+GG L + H I + L G +A GS + IW D
Sbjct: 263 ENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTED 318
>UNIPROTKB|E1BRJ9 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00823063
Ensembl:ENSGALT00000039543 ArrayExpress:E1BRJ9 Uniprot:E1BRJ9
Length = 894
Score = 135 (52.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISY 268
A V L+WDP V+ ED I+ + R + T Q+ L H + + +I +
Sbjct: 543 AAVSDLSWDPFDPQRLAVAGEDAKIRLW--RVPEGGLQDTLQEPEAVLRGHTEKIYSIRF 600
Query: 269 NPLVPNLLATGSTDKMVKLWDL-SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK 327
+P+ +LL + S D V++WDL + + C+ + +FS+A+S D LA
Sbjct: 601 HPVAADLLVSSSYDMTVRIWDLGAGREVLCLQGHTDQ---IFSLAWSPDGR-KLATVSKD 656
Query: 328 GKLEIWD 334
G+L +++
Sbjct: 657 GRLRLFE 663
Score = 81 (33.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
+ ++ K+V +WDV + LE H D++Q+++W H ++L + D+ + + D R
Sbjct: 141 ILTSGVGKRVTVWDVGQQQPLAALEAHGDQLQSLSWKHDG-RLLGTSCKDKKLRIFDPRA 199
Query: 198 S 198
S
Sbjct: 200 S 200
>UNIPROTKB|F1NP32 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00818031
Ensembl:ENSGALT00000012652 ArrayExpress:F1NP32 Uniprot:F1NP32
Length = 894
Score = 135 (52.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISY 268
A V L+WDP V+ ED I+ + R + T Q+ L H + + +I +
Sbjct: 543 AAVSDLSWDPFDPQRLAVAGEDAKIRLW--RVPEGGLQDTLQEPEAVLRGHTEKIYSIRF 600
Query: 269 NPLVPNLLATGSTDKMVKLWDL-SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK 327
+P+ +LL + S D V++WDL + + C+ + +FS+A+S D LA
Sbjct: 601 HPVAADLLVSSSYDMTVRIWDLGAGREVLCLQGHTDQ---IFSLAWSPDGR-KLATVSKD 656
Query: 328 GKLEIWD 334
G+L +++
Sbjct: 657 GRLRLFE 663
Score = 81 (33.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
+ ++ K+V +WDV + LE H D++Q+++W H ++L + D+ + + D R
Sbjct: 141 ILTSGVGKRVTVWDVGQQQPLAALEAHGDQLQSLSWKHDG-RLLGTSCKDKKLRIFDPRA 199
Query: 198 S 198
S
Sbjct: 200 S 200
>UNIPROTKB|E1BR57 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00819431
Ensembl:ENSGALT00000039544 ArrayExpress:E1BR57 Uniprot:E1BR57
Length = 895
Score = 135 (52.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISY 268
A V L+WDP V+ ED I+ + R + T Q+ L H + + +I +
Sbjct: 544 AAVSDLSWDPFDPQRLAVAGEDAKIRLW--RVPEGGLQDTLQEPEAVLRGHTEKIYSIRF 601
Query: 269 NPLVPNLLATGSTDKMVKLWDL-SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK 327
+P+ +LL + S D V++WDL + + C+ + +FS+A+S D LA
Sbjct: 602 HPVAADLLVSSSYDMTVRIWDLGAGREVLCLQGHTDQ---IFSLAWSPDGR-KLATVSKD 657
Query: 328 GKLEIWD 334
G+L +++
Sbjct: 658 GRLRLFE 664
Score = 81 (33.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
+ ++ K+V +WDV + LE H D++Q+++W H ++L + D+ + + D R
Sbjct: 141 ILTSGVGKRVTVWDVGQQQPLAALEAHGDQLQSLSWKHDG-RLLGTSCKDKKLRIFDPRA 199
Query: 198 S 198
S
Sbjct: 200 S 200
>UNIPROTKB|F1NUQ0 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000346 "transcription export complex" evidence=IEA]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006406 GO:GO:0000346
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:AADN02028708 IPI:IPI00595007
Ensembl:ENSGALT00000040847 Uniprot:F1NUQ0
Length = 381
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H DSV L W+ ++ +AS DK ++IWDV KC T+ + + + W+ Q
Sbjct: 70 HGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENIN-ICWSPDG-QT 127
Query: 181 LLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ G+ D V DA+ TH S + +V ++W+ + + F ++ +G I
Sbjct: 128 IAVGNKDDVVTFIDAK--THRSKAEEQFKFEVNEISWN-NDNNMFFLTNGNGCIN----- 179
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
S P+ QS ++AH I ++P+ ATGS D +V LWD+ ++ C+
Sbjct: 180 -ILSYPELKPIQS---INAHPSNCICIKFDPM-GKYFATGSADALVSLWDV--DELVCVR 232
Query: 300 SRNPKAGAVFSVAFSED 316
+ V +++FS D
Sbjct: 233 CFSRLDWPVRTLSFSHD 249
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 150 (57.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 64/213 (30%), Positives = 102/213 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H +V L K +LA+ D +V +W + C ++L HT V++V N +P+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN--TPEE 76
Query: 180 ILLSGSFDRSVVMKD---ARI-STHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIK 234
++++GS S+ + D A+I T G K A++ SL + P+ E FV S +D IK
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHK----ANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+DIR + F H +AV + ++P LA+ + D VKLWDL+ +
Sbjct: 131 LWDIRR---------KGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGK 180
Query: 295 PSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGS 326
+ S P G V V F + ++LA G S
Sbjct: 181 ---MMSEFPGHTGPVNVVEFHPNE-YLLASGSS 209
>MGI|MGI:1859866 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0040020 "regulation of meiosis" evidence=IGI]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050773
"regulation of dendrite development" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISO] [GO:0090129
"positive regulation of synapse maturation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1859866 GO:GO:0005813 GO:GO:0048471
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0016567 GO:GO:0005680 GO:GO:0050773 GO:GO:0000922
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0040020
GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OMA:RTPGKSN OrthoDB:EOG4CC414 EMBL:AB045313
EMBL:AF312208 EMBL:AK075998 EMBL:AK076030 EMBL:AK083459
EMBL:AK168650 EMBL:BC003215 IPI:IPI00320406 RefSeq:NP_075712.2
UniGene:Mm.289747 ProteinModelPortal:Q9JJ66 SMR:Q9JJ66
IntAct:Q9JJ66 MINT:MINT-2834618 STRING:Q9JJ66 PhosphoSite:Q9JJ66
PRIDE:Q9JJ66 DNASU:107995 Ensembl:ENSMUST00000006565 GeneID:107995
KEGG:mmu:107995 GeneTree:ENSGT00580000081599 InParanoid:Q9JJ66
NextBio:359849 Bgee:Q9JJ66 CleanEx:MM_CDC20 Genevestigator:Q9JJ66
GermOnline:ENSMUSG00000006398 Uniprot:Q9JJ66
Length = 499
Score = 165 (63.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 54/215 (25%), Positives = 102/215 (47%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D + +AW KE N LA +++ +V++WDV K + H+ +V +++WN + IL
Sbjct: 227 DYISSVAWIKE-GNYLAVGTSNAEVQLWDVQQQKRLRNMTSHSARVSSLSWNSY---ILS 282
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS + D R++ H + + +V L W P H L G +
Sbjct: 283 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH-----LASGGNDNI-VNVW 336
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIA 299
S P + T H AV +++ P N+LATG ++D+ +++W++ + +C++
Sbjct: 337 PSGPGESGWAPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSG--ACLS 394
Query: 300 SRNPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIW 333
+ + + V S+ +S + G ++ +L IW
Sbjct: 395 AVDVHS-QVCSILWSPHYKELISGHGFAQNQLVIW 428
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 129 (50.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D VL A++ + + +A+ SADK+VKIWD A GK T + H+++V + + S +
Sbjct: 656 HEDEVLCCAFSSD-DSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHL 714
Query: 181 LLS-GSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
LL+ GS D + + D + V + P E S DGT++ +D+R
Sbjct: 715 LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA-DGTLRLWDVR 773
Query: 240 TA 241
+A
Sbjct: 774 SA 775
Score = 90 (36.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/109 (29%), Positives = 48/109 (44%)
Query: 230 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
DGT+K +++ T + + D FT H C IS + ++ S DK K+W
Sbjct: 1064 DGTVKVWNVITGRIERD-------FTCHQGTVLSCAISSDA---TKFSSTSADKTAKIWS 1113
Query: 290 LSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338
P + G V AFS D +LA G G++ IW+ +SD
Sbjct: 1114 FDLLSP--LHELKGHNGCVRCSAFSLDG-ILLATGDDNGEIRIWN-VSD 1158
Score = 48 (22.0 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 271 LVPNL--LATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG 328
L P+L +A G D +K+ +L NN+ + KA V + F+ D +++
Sbjct: 969 LSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA--VRHIQFTADGKTLIS-SSEDS 1025
Query: 329 KLEIWD 334
+++W+
Sbjct: 1026 VIQVWN 1031
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 60/217 (27%), Positives = 101/217 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT S+ + ++ L ++SADK VKIW+++ C TL H V AW+ S I
Sbjct: 78 HTKSISAVKFSP-CGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSI 136
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
+ + S D++ +K + T K + + + S VVS D +++ +D+R
Sbjct: 137 V-TASDDKT--LKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVR 193
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--PSC 297
T TL AH V +S+N +L+ +GS D +V++WD +N Q +
Sbjct: 194 TGMCVK---------TLPAHSDPVSAVSFNR-DGSLITSGSYDGLVRIWDTANGQCVKTL 243
Query: 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ NP V V FS + ++L+ L++WD
Sbjct: 244 VDDENPP---VAFVKFSPNGKYILS-SNLDNTLKLWD 276
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 139 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVV---MKDA 195
A+A Q A K T+E HT + AV ++ + L + S D++V M D
Sbjct: 53 ATAPTTSQESTIPGAGYKLISTIEGHTKSISAVKFSPCG-KFLGTSSADKTVKIWNMSDL 111
Query: 196 RIS-THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSF 254
T +G K V AW ++ S V + +D T+K +++ T K +
Sbjct: 112 SCERTLTGHKLGV----NDFAWSADSK-SIVTASDDKTLKIYEVPTVKM---------AK 157
Query: 255 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFS 314
TL H V ++NP +L+ +GS D+ V++WD+ C+ + + V +V+F+
Sbjct: 158 TLKGHTNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVRTGM--CVKTLPAHSDPVSAVSFN 214
Query: 315 EDSPFVLAIGGSKGKLEIWDT 335
D + + G G + IWDT
Sbjct: 215 RDGSLITS-GSYDGLVRIWDT 234
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/177 (26%), Positives = 85/177 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT+ V +N + +++ S S D+ V+IWDV G C TL H+D V AV++N +
Sbjct: 162 HTNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDG-SL 219
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKGFD 237
+ SGS+D V + D + K V + V + + P+ ++ +L D T+K +D
Sbjct: 220 ITSGSYDGLVRIWDT--ANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNL-DNTLKLWD 276
Query: 238 IRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
K T +Q + H ++K +++ + +GS D + +W+L +
Sbjct: 277 FGKGK-----TLKQ--YQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKE 326
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 166 (63.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 64/229 (27%), Positives = 96/229 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WN++ N + SA DK IWD G+ H+ V W ++
Sbjct: 320 HKGPIFALKWNRK-GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN--MT 376
Query: 181 LLSGSFDRSV-VMK---DARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
S S D + V + D + T G +V ++ WDP S +D T+K +
Sbjct: 377 FASCSTDMCIHVCRLGCDRPVKTFQGH----TNEVNAIKWDPSGMLLASCS-DDMTLKIW 431
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-----N---LLATGSTDKMVKLW 288
++ D L AH+K + TI ++P P N +LA+ S D V+LW
Sbjct: 432 SMKQEVCIHD---------LQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 482
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D+ C + V+SVAFS D + LA G + IW+T S
Sbjct: 483 DIERGV--CTHTLTKHQEPVYSVAFSPDGRY-LASGSFDKCVHIWNTQS 528
Score = 122 (48.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 124 SVLGLAWNKEFRNI-LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
S G A + NI LASAS D V++WD+ G C TL H + V +VA++ + L
Sbjct: 455 SPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDG-RYLA 513
Query: 183 SGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
SGSFD+ V + + + S + + + + W+ + S DG++ D+R
Sbjct: 514 SGSFDKCVHIWNTQ-SGNLVHSYRGTGGIFEVCWNARGD-KVGASASDGSVCVLDLR 568
Score = 42 (19.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 59 LKDREKGNFMAVGSMEPAIEIWD 81
LK KGN++ ++ IWD
Sbjct: 327 LKWNRKGNYILSAGVDKTTIIWD 349
Score = 40 (19.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 15/56 (26%), Positives = 20/56 (35%)
Query: 28 EESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD 83
E S+GG L + H I + L G +A GS + IW D
Sbjct: 255 ENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTED 310
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 155 (59.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 48/167 (28%), Positives = 76/167 (45%)
Query: 139 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 198
A+ + D+ +KIWD+A+GK L+L H V+ VA + P + G DR V D +
Sbjct: 188 ATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGE-DRQVKCWDLEYN 246
Query: 199 THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA 258
+ V SLA P + S D T + +D+RT + + TL
Sbjct: 247 KVIRHYHGHLSAVYSLALHPTID-VLATSGRDSTARIWDMRT---------KANVHTLTG 296
Query: 259 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA 305
H V ++ P ++ TGS D V+LWDL+ + C + + K+
Sbjct: 297 HTNTVASVVAQATNPQII-TGSHDSTVRLWDLAAGKSVCTLTNHKKS 342
Score = 94 (38.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQ 179
H +V LA + ++LA++ D +IWD+ K N+ TL HT+ V +V +PQ
Sbjct: 255 HLSAVYSLALHPTI-DVLATSGRDSTARIWDMRT-KANVHTLTGHTNTVASVVAQATNPQ 312
Query: 180 ILLSGSFDRSVVMKD 194
I+ +GS D +V + D
Sbjct: 313 II-TGSHDSTVRLWD 326
Score = 67 (28.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 246 DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA 305
D + +S TL H K+V +I +P + + A+ S D +K W + + + +
Sbjct: 326 DLAAGKSVCTLTNHKKSVRSIVLHPSL-YMFASASPDN-IKQWRCPEGK--FVQNISGHT 381
Query: 306 GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSKPKKPQSV 357
V +A + + VL GG G + WD + G + F ++ P +P S+
Sbjct: 382 SIVNCMAANSEG--VLVSGGDNGTMFFWDWRT--GYN--FQRFQAPVQPGSM 427
Score = 50 (22.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 52 MAWLDCPLKDREKGN-FMAVGSMEPAIEIWDL 82
+ W+ C E GN + A G+ + I+IWDL
Sbjct: 172 LGWVRCIAV--EPGNEWFATGAGDRVIKIWDL 201
>RGD|620477 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10116 "Rattus
norvegicus" [GO:0000922 "spindle pole" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005680 "anaphase-promoting
complex" evidence=IEA;ISO;ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA;ISO] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=IEA;ISO;ISS] [GO:0040020 "regulation
of meiosis" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050773 "regulation of dendrite development"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA] [GO:0051488
"activation of anaphase-promoting complex activity"
evidence=IEA;ISO;ISS] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA;ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 RGD:620477
GO:GO:0005813 GO:GO:0048471 GO:GO:0043234 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0005680 GO:GO:0050773 GO:GO:0000922 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363
CTD:991 HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
EMBL:U05341 EMBL:AF052695 EMBL:BC085691 IPI:IPI00382084 PIR:B56021
RefSeq:NP_741990.1 UniGene:Rn.9262 ProteinModelPortal:Q62623
IntAct:Q62623 STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623
GeneID:64515 KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623
NextBio:613310 ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 164 (62.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 54/215 (25%), Positives = 102/215 (47%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D + +AW KE N LA +++ +V++WDV K + H+ +V +++WN + IL
Sbjct: 227 DYISSVAWIKE-GNYLAVGTSNAEVQLWDVQQQKRLRNMTSHSARVSSLSWNSY---ILS 282
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS + D R++ H + + +V L W P H L G +
Sbjct: 283 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH-----LASGGNDNI-VNVW 336
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIA 299
S P + T H AV +++ P N+LATG ++D+ +++W++ + +C++
Sbjct: 337 PSGPGESGWVPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSG--ACLS 394
Query: 300 SRNPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIW 333
+ + + V S+ +S + G ++ +L IW
Sbjct: 395 AVDVHS-QVCSILWSPHYKELISGHGFAQNQLVIW 428
>UNIPROTKB|Q62623 [details] [associations]
symbol:Cdc20 "Cell division cycle protein 20 homolog"
species:10116 "Rattus norvegicus" [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 RGD:620477 GO:GO:0005813 GO:GO:0048471
GO:GO:0043234 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
eggNOG:COG2319 GO:GO:0016567 GO:GO:0005680 GO:GO:0050773
GO:GO:0000922 GO:GO:0031145 GO:GO:0090129 GO:GO:0031915
GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OrthoDB:EOG4CC414 EMBL:U05341 EMBL:AF052695
EMBL:BC085691 IPI:IPI00382084 PIR:B56021 RefSeq:NP_741990.1
UniGene:Rn.9262 ProteinModelPortal:Q62623 IntAct:Q62623
STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623 GeneID:64515
KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623 NextBio:613310
ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 164 (62.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 54/215 (25%), Positives = 102/215 (47%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D + +AW KE N LA +++ +V++WDV K + H+ +V +++WN + IL
Sbjct: 227 DYISSVAWIKE-GNYLAVGTSNAEVQLWDVQQQKRLRNMTSHSARVSSLSWNSY---ILS 282
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS + D R++ H + + +V L W P H L G +
Sbjct: 283 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH-----LASGGNDNI-VNVW 336
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIA 299
S P + T H AV +++ P N+LATG ++D+ +++W++ + +C++
Sbjct: 337 PSGPGESGWVPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSG--ACLS 394
Query: 300 SRNPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIW 333
+ + + V S+ +S + G ++ +L IW
Sbjct: 395 AVDVHS-QVCSILWSPHYKELISGHGFAQNQLVIW 428
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 165 (63.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 66/221 (29%), Positives = 105/221 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H +V L K +LA+ D +V +W + C ++L HT V++V N +P+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN--TPEE 76
Query: 180 ILLSGSFDRSVVMKD---ARI-STHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIK 234
++++GS S+ + D A+I T G K A++ SL + P+ E FV S +D IK
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHK----ANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+DIR + F H +AV + ++P LA+ + D VKLWDL+ +
Sbjct: 131 LWDIRR---------KGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGK 180
Query: 295 PSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ S P G V V F + ++LA G S + WD
Sbjct: 181 ---MMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWD 217
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V + N ++ + S +++WD+ A K TL H + ++ + H +
Sbjct: 62 HTSPVESVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEF 119
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ SGS D ++ + D R F++ + V L + P + + +D T+K +D+
Sbjct: 120 VASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-SCI 298
K S F H V + ++P LLA+GS+D+ ++ WDL Q SCI
Sbjct: 178 AGK-------MMSEFP--GHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCI 227
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 119 (46.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 48/142 (33%), Positives = 68/142 (47%)
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL 256
I T SG K A++ S+ W AE S D TIK +D+ +S S +S+ T
Sbjct: 250 IVTLSGHKEAIS----SVLWSD-AEEICSASW-DHTIKVWDV-------ESGSLKSTLT- 295
Query: 257 HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA-SRNPKAGAVFSVAFSE 315
+K ISY+PL L A+GSTD+ ++LWD S ++ S G V SV +S
Sbjct: 296 --GNKVFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSP 352
Query: 316 DSPFVLAIGGSKGKLEIWDTLS 337
L G +++WDT S
Sbjct: 353 THEQQLISGSLDNMVKLWDTRS 374
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKV-QAVAWNHHSPQ 179
H +++ + W+ + SAS D +K+WDV +G TL + KV ++++ +
Sbjct: 256 HKEAISSVLWSDAEE--ICSASWDHTIKVWDVESGSLKSTLTGN--KVFNCISYSPLCKR 311
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKGF 236
L SGS DR + + D R S ++ + V S+ W P E + D +K +
Sbjct: 312 -LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLW 370
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 282
D R+ K+ P + L AH+ V ++ + LL +G D
Sbjct: 371 DTRSCKA-P-------LYDLAAHEDKVLSVDWTD--SGLLLSGGAD 406
Score = 88 (36.0 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H D + + +E+ + + S DK +IW + GK +T+ HTD V+ VAW
Sbjct: 100 HDDWISAIEGTEEW---ILTGSYDKTSRIWSLE-GKSIMTIVGHTDVVKDVAWVKKDSLS 155
Query: 180 -ILLSGSFDRSVVM 192
+LLS S D+++++
Sbjct: 156 CLLLSASMDQTILL 169
Score = 68 (29.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 121 HTDSVLGLAWNKE--FRNILASASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWN 174
HTD V +AW K+ +L SAS D+ + +W+ + + H H V ++A +
Sbjct: 139 HTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVD 198
Query: 175 HHSPQILLSGSFDR 188
+ SGS+D+
Sbjct: 199 STGTKFC-SGSWDK 211
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 66/221 (29%), Positives = 105/221 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H +V L K +LA+ D +V +W + C ++L HT V++V N +P+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN--TPEE 76
Query: 180 ILLSGSFDRSVVMKD---ARI-STHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIK 234
++++GS S+ + D A+I T G K A++ SL + P+ E FV S +D IK
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHK----ANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+DIR + F H +AV + ++P LA+ + D VKLWDL+ +
Sbjct: 131 LWDIRR---------KGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGK 180
Query: 295 PSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ S P G V V F + ++LA G S + WD
Sbjct: 181 ---MMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWD 217
Score = 138 (53.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 53/198 (26%), Positives = 89/198 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V + N ++ + S +++WD+ A K TL H + ++ + H +
Sbjct: 62 HTSPVESVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEF 119
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ SGS D ++ + D R F++ + V L + P + + +D T+K +D+
Sbjct: 120 VASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-SCI 298
K S F H V + ++P LLA+GS+D+ ++ WDL Q SCI
Sbjct: 178 AGK-------MMSEFP--GHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCI 227
Query: 299 ASRNPKAGAVFSVAFSED 316
P G V SV F+ D
Sbjct: 228 EGE-P--GPVRSVLFNPD 242
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 66/221 (29%), Positives = 105/221 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H +V L K +LA+ D +V +W + C ++L HT V++V N +P+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN--TPEE 76
Query: 180 ILLSGSFDRSVVMKD---ARI-STHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIK 234
++++GS S+ + D A+I T G K A++ SL + P+ E FV S +D IK
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHK----ANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+DIR + F H +AV + ++P LA+ + D VKLWDL+ +
Sbjct: 131 LWDIRR---------KGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGK 180
Query: 295 PSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ S P G V V F + ++LA G S + WD
Sbjct: 181 ---MMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWD 217
Score = 138 (53.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 53/198 (26%), Positives = 89/198 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V + N ++ + S +++WD+ A K TL H + ++ + H +
Sbjct: 62 HTSPVESVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEF 119
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ SGS D ++ + D R F++ + V L + P + + +D T+K +D+
Sbjct: 120 VASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-SCI 298
K S F H V + ++P LLA+GS+D+ ++ WDL Q SCI
Sbjct: 178 AGK-------MMSEFP--GHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCI 227
Query: 299 ASRNPKAGAVFSVAFSED 316
P G V SV F+ D
Sbjct: 228 EGE-P--GPVRSVLFNPD 242
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 66/221 (29%), Positives = 105/221 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H +V L K +LA+ D +V +W + C ++L HT V++V N +P+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN--TPEE 76
Query: 180 ILLSGSFDRSVVMKD---ARI-STHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIK 234
++++GS S+ + D A+I T G K A++ SL + P+ E FV S +D IK
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHK----ANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+DIR + F H +AV + ++P LA+ + D VKLWDL+ +
Sbjct: 131 LWDIRR---------KGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGK 180
Query: 295 PSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ S P G V V F + ++LA G S + WD
Sbjct: 181 ---MMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWD 217
Score = 138 (53.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 53/198 (26%), Positives = 89/198 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V + N ++ + S +++WD+ A K TL H + ++ + H +
Sbjct: 62 HTSPVESVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEF 119
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ SGS D ++ + D R F++ + V L + P + + +D T+K +D+
Sbjct: 120 VASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-SCI 298
K S F H V + ++P LLA+GS+D+ ++ WDL Q SCI
Sbjct: 178 AGK-------MMSEFP--GHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCI 227
Query: 299 ASRNPKAGAVFSVAFSED 316
P G V SV F+ D
Sbjct: 228 EGE-P--GPVRSVLFNPD 242
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 66/221 (29%), Positives = 105/221 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H +V L K +LA+ D +V +W + C ++L HT V++V N +P+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN--TPEE 76
Query: 180 ILLSGSFDRSVVMKD---ARI-STHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIK 234
++++GS S+ + D A+I T G K A++ SL + P+ E FV S +D IK
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHK----ANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+DIR + F H +AV + ++P LA+ + D VKLWDL+ +
Sbjct: 131 LWDIRR---------KGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGK 180
Query: 295 PSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ S P G V V F + ++LA G S + WD
Sbjct: 181 ---MMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWD 217
Score = 138 (53.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 53/198 (26%), Positives = 89/198 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V + N ++ + S +++WD+ A K TL H + ++ + H +
Sbjct: 62 HTSPVESVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEF 119
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ SGS D ++ + D R F++ + V L + P + + +D T+K +D+
Sbjct: 120 VASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-SCI 298
K S F H V + ++P LLA+GS+D+ ++ WDL Q SCI
Sbjct: 178 AGK-------MMSEFP--GHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCI 227
Query: 299 ASRNPKAGAVFSVAFSED 316
P G V SV F+ D
Sbjct: 228 EGE-P--GPVRSVLFNPD 242
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 66/221 (29%), Positives = 105/221 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H +V L K +LA+ D +V +W + C ++L HT V++V N +P+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN--TPEE 76
Query: 180 ILLSGSFDRSVVMKD---ARI-STHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIK 234
++++GS S+ + D A+I T G K A++ SL + P+ E FV S +D IK
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHK----ANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+DIR + F H +AV + ++P LA+ + D VKLWDL+ +
Sbjct: 131 LWDIRR---------KGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGK 180
Query: 295 PSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ S P G V V F + ++LA G S + WD
Sbjct: 181 ---MMSEFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWD 217
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V + N ++ + S +++WD+ A K TL H + ++ + H +
Sbjct: 62 HTSPVESVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEF 119
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ SGS D ++ + D R F++ + V L + P + + +D T+K +D+
Sbjct: 120 VASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-SCI 298
K S F H V + ++P LLA+GS+D+ ++ WDL Q SCI
Sbjct: 178 AGK-------MMSEFP--GHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCI 227
Query: 299 ASRNPKAGAVFSVAFSED 316
P G V S+ F+ D
Sbjct: 228 EGE-P--GPVRSILFNPD 242
>SGD|S000002971 [details] [associations]
symbol:CDH1 "Activator of anaphase-promoting
complex/cyclosome (APC/C)" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:2000600 "positive
regulation of cyclin catabolic process" evidence=IDA] [GO:0030332
"cyclin binding" evidence=IDA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=IMP] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0005680
"anaphase-promoting complex" evidence=IPI] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0010697 "negative
regulation of spindle pole body separation" evidence=IGI;IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0010997
"anaphase-promoting complex binding" evidence=IDA] [GO:0097027
"ubiquitin-protein ligase activator activity" evidence=IDA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002971 GO:GO:0005737 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
eggNOG:COG2319 GO:GO:0008361 GO:GO:0005680 GO:GO:0007092
GO:GO:2000060 HOGENOM:HOG000195514 GO:GO:0010997 GO:GO:0097027
KO:K03364 EMBL:Z72525 EMBL:AY693078 PIR:S64005 RefSeq:NP_011512.1
ProteinModelPortal:P53197 SMR:P53197 DIP:DIP-5915N IntAct:P53197
MINT:MINT-673168 STRING:P53197 EnsemblFungi:YGL003C GeneID:852881
KEGG:sce:YGL003C CYGD:YGL003c GeneTree:ENSGT00580000081606
OMA:TSHGYSK OrthoDB:EOG43FM5B NextBio:972526 Genevestigator:P53197
GermOnline:YGL003C GO:GO:0030332 GO:GO:0010697 GO:GO:2000600
Uniprot:P53197
Length = 566
Score = 164 (62.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 57/202 (28%), Positives = 98/202 (48%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
LA A+ V+I+DV KC TL H D+V ++WN+H +L SGS D ++ +D R+
Sbjct: 317 LAVGQANGLVEIYDVMKRKCIRTLSGHIDRVACLSWNNH---VLTSGSRDHRILHRDVRM 373
Query: 198 STHSGFKWAVA--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
F+ + +V L W+ A++ D + ++ TS+ T
Sbjct: 374 PDPF-FETIESHTQEVCGLKWNV-ADNKLASGGNDNVVHVYE---------GTSKSPILT 422
Query: 256 LHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNN-QPSCIASRNPKAGAVFSVA 312
H AV ++++P +LATG + D+ +K+W+++ + + S I S + V+S
Sbjct: 423 FDEHKAAVKAMAWSPHKRGVLATGGGTADRRLKIWNVNTSIKMSDIDSGSQICNMVWSKN 482
Query: 313 FSEDSPFVLAIGGSKGKLEIWD 334
+E V + G SK L +WD
Sbjct: 483 TNE---LVTSHGYSKYNLTLWD 501
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 59/220 (26%), Positives = 91/220 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQ 179
H D V L+WN ++L S S D ++ DV T+E HT +V + WN +
Sbjct: 343 HIDRVACLSWNN---HVLTSGSRDHRILHRDVRMPDPFFETIESHTQEVCGLKWNVADNK 399
Query: 180 ILLSGSFDRSV-VMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVS--LEDGTIKGF 236
L SG D V V + S F AA V+++AW PH D +K +
Sbjct: 400 -LASGGNDNVVHVYEGTSKSPILTFDEHKAA-VKAMAWSPHKRGVLATGGGTADRRLKIW 457
Query: 237 DIRTA--KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM-VKLWDLSNN 293
++ T+ SD DS SQ +C + ++ L+ + K + LWD ++
Sbjct: 458 NVNTSIKMSDIDSGSQ------------ICNMVWSKNTNELVTSHGYSKYNLTLWDCNSM 505
Query: 294 QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
P IA + V + S D V++ G + L W
Sbjct: 506 DP--IAILKGHSFRVLHLTLSNDGTTVVSGAGDE-TLRYW 542
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 165 (63.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 47/168 (27%), Positives = 79/168 (47%)
Query: 128 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD 187
L+WNK +N +AS+ + V +WDV + + E H + +V ++ P +L+SGS D
Sbjct: 426 LSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 485
Query: 188 RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS 247
V + R S + A++ + ++P + + V D I +D+R
Sbjct: 486 CKVKVWCTRQEA-SVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNIS----- 539
Query: 248 TSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
Q H KAV + + L N LA+ STD ++LWD+ +N P
Sbjct: 540 ---QPLHVFSGHKKAVSYVKF--LSNNELASASTDSTLRLWDVKDNLP 582
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 53/210 (25%), Positives = 90/210 (42%)
Query: 137 ILASASADKQVKIWDVAAG-------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRS 189
+ A+A + +K++D ++ +C + K+ ++WN H + S ++
Sbjct: 385 LFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGI 444
Query: 190 VVMKDARISTHSGFKWAVAADVESLAWD---PHAEHSFVVSLEDGTIKGFDIRTAKSDPD 246
V + D ++T + E AW E S +VS G D K
Sbjct: 445 VTVWD--VTTRQSLM--EYEEHEKRAWSVDFSRTEPSMLVS-------GSD--DCKVKVW 491
Query: 247 STSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIASRNPK 304
T Q++S ++ KA +C + YNP N +A GS D + +DL N +QP + S + K
Sbjct: 492 CTRQEAS-VINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKK 550
Query: 305 AGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
A V V F ++ LA + L +WD
Sbjct: 551 A--VSYVKFLSNNE--LASASTDSTLRLWD 576
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 166 (63.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 60/224 (26%), Positives = 96/224 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H DS+ LA++ + + I+ +A D ++K+WD+ +G C +T HT V A + +
Sbjct: 342 HFDSMNALAYSPDGKRIVTAAD-DGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKG-NV 399
Query: 181 LLSGSFDRSVVMKDA-RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L + S D S+ D R F +A DP E VV+ G++ FD+
Sbjct: 400 LFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGE---VVAA--GSLDSFDVH 454
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
Q L H+ V +++ P LL +GS DK ++W + N +
Sbjct: 455 IWSVQTGQLLDQ----LSGHEGPVSAVAFAP-DGGLLVSGSWDKTARIWSVFNRTQT--- 506
Query: 300 SRNPKAGA-VFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342
S + A V SVA DS LA+ G++ W +S
Sbjct: 507 SEPLQLQADVLSVAVRPDSS-QLAVSTLDGQISFWSVTEAQQVS 549
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 159 (61.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 65/228 (28%), Positives = 103/228 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV------AAGKCNLTLEHHTDKVQAVAWN 174
H V +A + E + + S+S DK V +W + + GK + +L+ H+ VQ V +
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVIS 79
Query: 175 HHSPQILLSGSFDRSVVMKDAR--ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 232
H Q LSGS+D ++ + D +ST FK DV S+A+ + D T
Sbjct: 80 HDG-QFALSGSWDNTLRLWDITKGVSTRL-FK-GHTQDVMSVAFSSD-NRQIISGSRDAT 135
Query: 233 IKGFDIRTAKSDPDSTSQQSSFTLH---AHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
IK ++ T + FTL AH V I ++P P +++ GS D VK+WD
Sbjct: 136 IKVWN----------TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVS-GSWDNKVKIWD 184
Query: 290 LSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
+ + + C + G V +V S D + A GG +W+ S
Sbjct: 185 IKSFK--CNHTLTDHTGYVNTVTISPDGS-LCASGGKDTFACLWELSS 229
Score = 132 (51.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 52/201 (25%), Positives = 95/201 (47%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
S S D +++WD+ G + HT V +VA++ + QI+ SGS D ++ + +
Sbjct: 87 SGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQII-SGSRDATIKVWNTLGEC 145
Query: 200 HSGFKWAVAAD--VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH 257
+ A V + + P+ + V D +K +DI++ K + TL
Sbjct: 146 KFTLEGPEAHQDWVSCIRFSPNTP-TIVSGSWDNKVKIWDIKSFKCN---------HTLT 195
Query: 258 AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC-IASRNPKAGAVFSVAFSED 316
H V T++ +P +L A+G D LW+LS+ +P + +RN + ++AFS +
Sbjct: 196 DHTGYVNTVTISP-DGSLCASGGKDTFACLWELSSGKPLYKLEARN----TINALAFSPN 250
Query: 317 SPFVLAIGGSKGKLEIWDTLS 337
++ A + K+ IWD L+
Sbjct: 251 KYWLSA--ATDDKIIIWDLLT 269
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 56/229 (24%), Positives = 105/229 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH---HTDKVQAVAWNHHS 177
HT V+ +A++ + R I+ S S D +K+W+ G+C TLE H D V + ++ ++
Sbjct: 111 HTQDVMSVAFSSDNRQII-SGSRDATIKVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNT 168
Query: 178 PQILLSGSFDRSVVMKDAR-------ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLED 230
P I+ SGS+D V + D + ++ H+G+ V + + +F E
Sbjct: 169 PTIV-SGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWEL 227
Query: 231 GTIKGFDIRTAKSDPDSTS-QQSSFTLHAH-DKAVCTISYNPLVPNLLATGSTDKMVKLW 288
+ K A++ ++ + + + L A D + I ++ L +LA + + +
Sbjct: 228 SSGKPLYKLEARNTINALAFSPNKYWLSAATDDKI--IIWDLLTKQVLAEIVPEVKEQAF 285
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
D + S PKA A S+A+S D VL G + G + ++ + S
Sbjct: 286 DSKKKKES-----KPKAPACLSLAWSADGS-VLYAGYNDGLIRVYKSSS 328
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 153 (58.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 58/206 (28%), Positives = 95/206 (46%)
Query: 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
N LA+ + DK VK+WD+ K T H + ++ ++ + ++SGS D+ + D
Sbjct: 340 NYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDG-RFIVSGSGDKKAKIWDI 398
Query: 196 RIS----THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQ 251
T + V S+A P SL D ++ +D +T
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSL-DNIVRLWDAQTG---------Y 448
Query: 252 SSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS--CIASRNPKAGAVF 309
H +V +++++P +L A+GS DK +KLWDLS ++ C A+ N V
Sbjct: 449 FLERYEGHLDSVYSVAFSPDGKSL-ASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVL 507
Query: 310 SVAFSEDSPFVLAIGGSKGK-LEIWD 334
SVAFS D ++ I GSK + ++ WD
Sbjct: 508 SVAFSPDGSWL--ISGSKDRSVQFWD 531
Score = 151 (58.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 58/219 (26%), Positives = 101/219 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHT----DKVQAVAWNHH 176
H + L ++ + R I+ S S DK+ KIWD+ GKC TL + + V +VA +
Sbjct: 368 HELDIYSLDYSSDGRFIV-SGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 177 SPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
+++ +GS D V + DA+ V S+A+ P + SL D ++K +
Sbjct: 427 G-RLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSL-DKSLKLW 484
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296
D+ ++S + T + H V +++++P + L +GS D+ V+ WD N
Sbjct: 485 DLSGSRS-----RSRCRATFNGHKDFVLSVAFSP-DGSWLISGSKDRSVQFWDPRNGTTH 538
Query: 297 CIASRNPKAGAVFSVAFS--EDSPFVLAIGGSKGKLEIW 333
+ + + V SVA S +S V A G + +W
Sbjct: 539 MMLQGHKNS--VISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 55 (24.4 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 65 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILG 95
GN++A G+ + +++WD+ ++Q H G
Sbjct: 339 GNYLATGAEDKTVKVWDIHT-KKIQ-HTFYG 367
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 161 (61.7 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 48/180 (26%), Positives = 91/180 (50%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + V +A+N + + +A+ S DK K+W V GKC T HT ++ +++N S +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST-L 191
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ +GS D + + D + +A++ SL+++ + +++ G+ FD
Sbjct: 192 VATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR--IIT---GS---FDHTV 243
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
D D T ++ + + H + + S+N +L+ TGS DK KLWD +N + C+A+
Sbjct: 244 VVWDAD-TGRKVNILI-GHCAEISSASFN-WDCSLILTGSMDKTCKLWDATNGK--CVAT 298
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 55/216 (25%), Positives = 100/216 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +A NK + + S D+ K+WD A+G+ TLE H + V A+A+N+
Sbjct: 91 HILPLTNVALNKS-GSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDK 149
Query: 181 LLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ +GSFD++ + + F+ A++ L+++P + S+ D T K +DI+
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFR-GHTAEIVCLSFNPQSTLVATGSM-DTTAKLWDIQ 207
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
+ +TL H + ++S+N ++ TGS D V +WD + I
Sbjct: 208 NG---------EEVYTLRGHSAEIISLSFNTSGDRII-TGSFDHTVVVWDADTGRKVNIL 257
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKL-EIWD 334
+ + S +F+ D +L GS K ++WD
Sbjct: 258 IGH--CAEISSASFNWDCSLILT--GSMDKTCKLWD 289
Score = 151 (58.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 55/218 (25%), Positives = 97/218 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG-KCNLTLEHHTDKVQAVAWNHHSPQ 179
H+ ++ L++N I+ + S D V +WD G K N+ + H + + + ++N
Sbjct: 218 HSAEIISLSFNTSGDRII-TGSFDHTVVVWDADTGRKVNILIGHCAE-ISSASFNWDC-S 274
Query: 180 ILLSGSFDRSVVMKDAR----ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235
++L+GS D++ + DA ++T +G + ++S +D + + DGT +
Sbjct: 275 LILTGSMDKTCKLWDATNGKCVATLTGHDDEI---LDS-CFD-YTGKLIATASADGTARI 329
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
F T K L H+ + IS+NP +LL TGS+DK ++WD Q
Sbjct: 330 FSAATRKCIAK---------LEGHEGEISKISFNPQGNHLL-TGSSDKTARIWDAQTGQ- 378
Query: 296 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
C+ +FS AF+ V+ G IW
Sbjct: 379 -CLQVLEGHTDEIFSCAFNYKGNIVIT-GSKDNTCRIW 414
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 165 (63.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 66/221 (29%), Positives = 102/221 (46%)
Query: 135 RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVV--- 191
+N S D QV++++ G+ E H D ++A+ H + LL+ S D ++
Sbjct: 68 KNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVV-HPTQPFLLTSSDDMTIKCFN 126
Query: 192 --MKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTS 249
M + T G + V SLA +P ++F S DGT+K + S
Sbjct: 127 WDMSWKCVQTFEGH----SRYVMSLAINPKDTNTFASSCLDGTVKVWSFG---------S 173
Query: 250 QQSSFTLHAHDKAVCTISYNPL--VPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGA 307
++FTL AHD+ V ++Y P P L+ G D ++K+WD +C+
Sbjct: 174 SVANFTLQAHDRGVNYVNYYPAGDKPYLITAGD-DNLIKVWDYQTK--ACVRILEGHTNN 230
Query: 308 VFSVAFSEDSPFVLAIGGSK-GKLEIWDTLSDAGI-SNRFS 346
V S AF S F + I GS+ G ++IW TLS + I S FS
Sbjct: 231 V-SFAFFH-SKFPIIISGSEDGTVKIWHTLSYSLIKSYNFS 269
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 140 (54.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 39/161 (24%), Positives = 79/161 (49%)
Query: 144 DKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR---I 197
D+++ IWD + K + +++ HT +V +++N +S IL +GS D++V + D R +
Sbjct: 4 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 63
Query: 198 STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI-----RTAKSDPDSTSQQS 252
HS F+ + ++ + W PH E S D + +D+ + D + +
Sbjct: 64 KLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 121
Query: 253 SFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293
F H + S+NP P ++ + S D ++++W ++ N
Sbjct: 122 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 162
Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 247 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAG 306
+ + + S ++ AH V +S+NP +LATGS DK V LWDL N + + + K
Sbjct: 15 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-D 73
Query: 307 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340
+F V +S + +LA G+ +L +WD LS G
Sbjct: 74 EIFQVQWSPHNETILASSGTDRRLNVWD-LSKIG 106
Score = 118 (46.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQ 179
HT V L++N ILA+ SADK V +WD+ K L + E H D++ V W+ H+
Sbjct: 27 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 86
Query: 180 ILLSGSFDRSVVMKD 194
IL S DR + + D
Sbjct: 87 ILASSGTDRRLNVWD 101
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 159 (61.0 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 59/227 (25%), Positives = 100/227 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H +++L L W + I+ SAS DK V+ WDV GK + H+ V + P +
Sbjct: 95 HKNAILDLHWTSDGSQIV-SASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPL 153
Query: 181 LLSGSFDRSVVMKDAR----ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
++SGS D + + D R I T K+ + A +++ A+ F + D +K +
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFPD-KYQITA----VSFSDAADKIFTGGV-DNDVKVW 207
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296
D+R +++ TL H + +S +P LL G +K+ +WD+ P
Sbjct: 208 DLRKG---------EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLC-VWDMRPYAPQ 257
Query: 297 --CI----ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
C+ ++ + ++S D V A G S + IWDT S
Sbjct: 258 NRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTA-GSSDRMVHIWDTTS 303
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 47/216 (21%), Positives = 87/216 (40%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSP 178
H +V + +N ++AS S D+++ +W V G C + L+ H + + + W
Sbjct: 52 HPSAVYTMKFNPA-GTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHWTSDGS 109
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
QI+ S S D++V D ++ V S + +DGT K +D+
Sbjct: 110 QIV-SASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298
R Q+ + + +S++ + TG D VK+WDL + +
Sbjct: 169 R----------QRGAIQTFPDKYQITAVSFSDAADKIF-TGGVDNDVKVWDLRKGEATMT 217
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ + ++ S D ++L G KL +WD
Sbjct: 218 LEGHQDT--ITGMSLSPDGSYLLT-NGMDNKLCVWD 250
>FB|FBgn0037569 [details] [associations]
symbol:tex "tex" species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR011659
Pfam:PF07676 EMBL:AY118857 ProteinModelPortal:Q8MSF3 SMR:Q8MSF3
STRING:Q8MSF3 PaxDb:Q8MSF3 PRIDE:Q8MSF3 FlyBase:FBgn0037569
InParanoid:Q8MSF3 OrthoDB:EOG4FJ6RC ArrayExpress:Q8MSF3 Bgee:Q8MSF3
Uniprot:Q8MSF3
Length = 320
Score = 158 (60.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT SV L W++ + A+AS DK V+IWD+ GKC + + +AW+ I
Sbjct: 71 HTASVDQLCWHRTNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGENIN-IAWSPDGKTI 129
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ G+ + + D R + + + +V ++W+ + F+ + G
Sbjct: 130 AV-GNKEDLITFIDTR-TNKIRVEEPFSFEVNEISWNNTNDLFFLTN-------GLGCMH 180
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
S P S + TL AH I + P ATGS D V LWD N+ +C+
Sbjct: 181 ILSYP---SLEHQMTLKAHPANCICIEFGP-TGKYFATGSADAQVSLWDA--NELACLRM 234
Query: 301 RNPKAGAVFSVAFSEDSPFV 320
+ V +++FS D +
Sbjct: 235 ISRLEWPVRTISFSHDERMI 254
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 156 (60.0 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 45/151 (29%), Positives = 68/151 (45%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
+ SAD+ +KIWD+A+GK L+L H V+ VA ++ SP + G D+ V D +
Sbjct: 225 TGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGE-DKQVKCWDLEYNK 283
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259
+ V L P + V D T + +DIRT + + TL H
Sbjct: 284 VIRHYHGHLSAVYDLDLHPTID-VLVTCSRDATARVWDIRT---------KANVHTLSGH 333
Query: 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
V T+ P ++ GS D ++LWDL
Sbjct: 334 TNTVATVKCQSAEPQVVTVGSHDTTIRLWDL 364
Score = 47 (21.6 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 63 EKGN-FMAVGSMEPAIEIWDL 82
E GN + GS + I+IWDL
Sbjct: 217 EPGNQWFVTGSADRTIKIWDL 237
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 155 (59.6 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 50/200 (25%), Positives = 92/200 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HTDSV L W+ + +++A+AS DK V++WD +GKC +E + + + + +
Sbjct: 65 HTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENIN-ITYKPDGTHV 123
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ G+ D + + D R + +V +AW+ + F+ + GT++
Sbjct: 124 AV-GNRDDELTILDVR-KFKPLHRRKFNYEVNEIAWNMPGDFFFLTT-GLGTVE------ 174
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
S P S + TL AH I+ +P A GS D +V LWD+S+ C+ +
Sbjct: 175 VLSYP---SLKPLDTLTAHTAGCYCIAIDPK-GRYFAVGSADSLVSLWDISDML--CLRT 228
Query: 301 RNPKAGAVFSVAFSEDSPFV 320
V +++F+ ++
Sbjct: 229 FTKLEWPVRTISFNYSGEYI 248
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA---GKC-NLTLEHHTDKVQAVAWNHH 176
H V +AWN LAS S D+ +IW++ K +L L+ HTD V + W+
Sbjct: 19 HKKKVHSVAWNSNGTK-LASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 177 SPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
++ + S D+SV + DAR S + ++ + ++ + P H V D +
Sbjct: 78 HSDLVATASGDKSVRLWDAR-SGKCTQQVELSGENINITYKPDGTH-VAVGNRDDELTIL 135
Query: 237 DIRTAK 242
D+R K
Sbjct: 136 DVRKFK 141
Score = 38 (18.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 65 GNFMAVGSMEPAIEIWDLD 83
G +A GS++ IW+++
Sbjct: 32 GTKLASGSVDQTARIWNIE 50
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 46/182 (25%), Positives = 85/182 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ + ++++ + S D+++ +WD+ K LT HT +V + +N S I
Sbjct: 220 HSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYI 279
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L +GS D++V + D R + D + +++ PH E S D + +DI
Sbjct: 280 LATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDIS 339
Query: 240 TAKSDPDSTSQQSSFT-------LHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291
+ DP S+S SS + +HA H V S+NP P + + +++W++S
Sbjct: 340 KIQ-DPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVS 398
Query: 292 NN 293
N+
Sbjct: 399 NS 400
Score = 151 (58.2 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 58/205 (28%), Positives = 94/205 (45%)
Query: 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSG-------FKWAVAAD 210
L L+ H + ++W++ LL+ D + D + T SG FK +++
Sbjct: 165 LRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFK-GHSSN 223
Query: 211 VESLAWDPHAEHSFVVSL--EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISY 268
E +++ HA H+FV +D + +D+R +K P T+ H V I++
Sbjct: 224 AEDVSF--HALHNFVFGSVGDDRKLNLWDLRQSK--PQLTAV-------GHTAEVNCITF 272
Query: 269 NPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG 328
NP +LATGS DK V LWD+ N + ++ +F V+FS VLA GS
Sbjct: 273 NPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHN-DEIFQVSFSPHYETVLASSGSDD 331
Query: 329 KLEIWDT--LSDAGISNRFSKYSKP 351
++ +WD + D S+ S S P
Sbjct: 332 RVIVWDISKIQDPSSSSAASSDSVP 356
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 159 (61.0 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + V +A+N + + +A+ S DK K+W V GKC T HT ++ +++N S +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST-L 191
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ +GS D + + D + +A++ SL+++ S D T+ ++ T
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSF-DHTVTVWEADT 250
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
+ +TL H + + +N +L+ TGS DK KLWD N + C+A+
Sbjct: 251 GRK---------VYTLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDAVNGK--CVAT 298
Score = 159 (61.0 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 56/219 (25%), Positives = 102/219 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +A NK + + S D+ K+WD A+G+ TLE H + V A+A+N+
Sbjct: 91 HILPLTNVALNKS-GSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 181 LLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ +GSFD++ + + F+ A++ L+++P + S+ D T K +DI+
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFR-GHTAEIVCLSFNPQSTLVATGSM-DTTAKLWDIQ 207
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
S + FTL H + ++S+N N + TGS D V +W+ + +
Sbjct: 208 ---------SGEEVFTLTGHSAEIISLSFNTS-GNRIITGSFDHTVTVWEADTGRK--VY 255
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKL-EIWDTLS 337
+ + S F+ D +L GS K ++WD ++
Sbjct: 256 TLIGHCAEISSAVFNWDCSLILT--GSMDKTCKLWDAVN 292
Score = 152 (58.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 52/217 (23%), Positives = 95/217 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ ++ L++N I+ + S D V +W+ G+ TL H ++ + +N +
Sbjct: 218 HSAEIISLSFNTSGNRII-TGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDC-SL 275
Query: 181 LLSGSFDRSVVMKDAR----ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
+L+GS D++ + DA ++T +G + ++S +D + + DGT + F
Sbjct: 276 ILTGSMDKTCKLWDAVNGKCVATLTGHDDEI---LDS-CFD-YTGKLIATASADGTARIF 330
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296
T ++ L H+ + IS+NP N L TGS+DK ++WD Q
Sbjct: 331 SAAT---------RECVTKLEGHEGEISKISFNPQ-GNRLLTGSSDKTARIWDAQTGQ-- 378
Query: 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
C+ +FS AF+ ++ G IW
Sbjct: 379 CLQVLEGHTDEIFSCAFNYKGDIIIT-GSKDNTCRIW 414
>DICTYBASE|DDB_G0269388 [details] [associations]
symbol:corB "coronin 7" species:44689 "Dictyostelium
discoideum" [GO:0051015 "actin filament binding" evidence=IEA;IDA]
[GO:0031589 "cell-substrate adhesion" evidence=IMP] [GO:0031276
"negative regulation of lateral pseudopodium assembly"
evidence=IMP] [GO:0031252 "cell leading edge" evidence=IDA]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0030864 "cortical actin cytoskeleton"
evidence=IDA] [GO:0030835 "negative regulation of actin filament
depolymerization" evidence=IDA] [GO:0009617 "response to bacterium"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IEA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0001667 "ameboidal cell migration" evidence=IMP]
[GO:0045335 "phagocytic vesicle" evidence=IBA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269388 GO:GO:0005829 GO:GO:0031252
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0009617 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030866 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006909 GO:GO:0051015 GO:GO:0042995
GO:GO:0001891 GO:GO:0030864 GO:GO:0031589 GO:GO:0001667
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
HSSP:O89053 OMA:EVEFARC RefSeq:XP_645927.1
ProteinModelPortal:Q55E54 EnsemblProtists:DDB0232260 GeneID:8616868
KEGG:ddi:DDB_G0269388 ProtClustDB:CLSZ2730920 GO:GO:0031276
Uniprot:Q55E54
Length = 962
Score = 164 (62.8 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 38/119 (31%), Positives = 67/119 (56%)
Query: 206 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 265
A ++ V ++P EH V + +D TIK ++I A ++ +S H K+V
Sbjct: 74 AHSSGVIDFEFNPFNEHQLVTASDDSTIKVWNIDEAIRSGATSLSSASIVCSGHSKSVEC 133
Query: 266 ISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
I++NP+ N+LA+ S DK +K+WDLSN + S N + G++ S++++ D ++A G
Sbjct: 134 IAFNPVANNILASCSADKTLKIWDLSNGEEKY--SWNFEQGSLTSLSWNYDGSLLVATG 190
Score = 124 (48.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 49/179 (27%), Positives = 85/179 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ SV +A+N NILAS SADK +KIWD++ G+ + + +++WN+ +
Sbjct: 127 HSKSVECIAFNPVANNILASCSADKTLKIWDLSNGEEKYSWNFEQGSLTSLSWNYDGSLL 186
Query: 181 LLSGSFDRSVVMKDAR----ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
+ +G ++ ++ DAR I G + A+ V W + H F+ + G K
Sbjct: 187 VATGKDLKNRII-DARTGESIQVGDGNQGVKASRV---VWLGNLNH-FLTA---GFSKMR 238
Query: 237 DIRTAK-SDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+ + S D + S TL + + I Y+ L +GS D V+++D+ N Q
Sbjct: 239 ERQLVLWSSQDLSKPIKSITLDSSTGIISPI-YDQDAQLLFISGSGDSSVRVFDM-NTQ 295
Score = 101 (40.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 229 EDGTIKGFDIRTAKSDPDSTSQQSS--FTLHA----HDKAVCTISYNPLVPNLLATGSTD 282
ED +K F I T P +T+ +S+ T A H++ V +++++P N+L T D
Sbjct: 580 EDSHVKVFKIPTG-GIPKTTANKSNNYTTTEADFVGHNRKVISVNFHPTAENVLITSGGD 638
Query: 283 KMVKLWDLSNNQPS-CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD-AG 340
+VKLWDL+ ++ N + SV + +L K K+ I+D ++ G
Sbjct: 639 MVVKLWDLNEGGAGEKLSFANVHTDMITSVDVNWTGDKILTSSKDK-KMRIFDPRTNKGG 697
Query: 341 ISNRFSKYSKPKKPQSV 357
+++ +S K ++V
Sbjct: 698 LASETVTHSGSKGGKAV 714
Score = 84 (34.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 32/134 (23%), Positives = 64/134 (47%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV----AAGKCNLT-----LEHHTDKVQAV 171
H+ V+ +N + L +AS D +K+W++ +G +L+ H+ V+ +
Sbjct: 75 HSSGVIDFEFNPFNEHQLVTASDDSTIKVWNIDEAIRSGATSLSSASIVCSGHSKSVECI 134
Query: 172 AWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA-ADVESLAWDPHAEHSFVVSL-E 229
A+N + IL S S D+++ + D + + W + SL+W+ + S +V+ +
Sbjct: 135 AFNPVANNILASCSADKTLKIWDLS-NGEEKYSWNFEQGSLTSLSWN--YDGSLLVATGK 191
Query: 230 DGTIKGFDIRTAKS 243
D + D RT +S
Sbjct: 192 DLKNRIIDARTGES 205
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 274 NLLATGSTDKMVKLWDL------------SNNQPSCIASRNPKAGAVFSVAFSEDSPFVL 321
+L+ATGS D VK++ + SNN + A V SV F + VL
Sbjct: 573 SLVATGSEDSHVKVFKIPTGGIPKTTANKSNNYTTTEADFVGHNRKVISVNFHPTAENVL 632
Query: 322 AIGGSKGKLEIWDTLSDAGISNRFS 346
G +++WD L++ G + S
Sbjct: 633 ITSGGDMVVKLWD-LNEGGAGEKLS 656
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 157 (60.3 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 52/177 (29%), Positives = 86/177 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHHSP 178
HT ++ LAW+ + LASAS D V +WD +G+ CN TLE H ++V++V W+ S
Sbjct: 59 HTRTIRELAWSC-CGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSR-SG 116
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAVAA-------DVESLAWDPHAEHSFVVSLEDG 231
+L + S D+SV + + + ++ A DV+ + W P E + D
Sbjct: 117 NLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQ-EDLLASASYDN 175
Query: 232 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
TI+ + + D + + L +H V +IS++ LA+ S D VK+W
Sbjct: 176 TIRMY-----RQDLADSEWEMLEPLESHSSTVWSISFDA-TGQRLASCSEDTTVKVW 226
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 44/202 (21%), Positives = 90/202 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVA-----AGKCNLTLEHHTDKVQAVAWNH 175
H V AW+ + + AS DK +++W+ + + LT + HT ++ +AW+
Sbjct: 13 HAGRVWSAAWHPGGK-LFASCGEDKTIRVWNKSDTDRWVAQTVLT-DGHTRTIRELAWSC 70
Query: 176 HSPQILLSGSFDRSVVMKDARISTHSGFKWAVAAD--VESLAWDPHAEHSFVVSLEDGTI 233
L S SFD +V + D + D V+S+ W + + D ++
Sbjct: 71 CG-HYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWS-RSGNLLATCSRDKSV 128
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW--DLS 291
++I A D + L+ H + V + ++P +LLA+ S D ++++ DL+
Sbjct: 129 WIWEIHHAPDQEDE--YECVAVLNGHTQDVKKVCWHPQ-EDLLASASYDNTIRMYRQDLA 185
Query: 292 NNQPSCIASRNPKAGAVFSVAF 313
+++ + + V+S++F
Sbjct: 186 DSEWEMLEPLESHSSTVWSISF 207
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 156 (60.0 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 58/188 (30%), Positives = 87/188 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHHSP 178
H ++ L W+ LASAS D IWD +G+ CN TLE H ++V++V W+ S
Sbjct: 49 HQRTIRSLGWSP-CGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSV-SG 106
Query: 179 QILLSGSFDRSV----VMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
+L + D+SV V +D S + DV+ + W P E S +D TIK
Sbjct: 107 SLLATCGRDKSVWIWEVQEDDEYECASVIH-SHTQDVKKVVWHPTKEILASCSYDD-TIK 164
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL--SN 292
+ K D D S TL H+ V +IS++ +++ S DK V++W
Sbjct: 165 LY-----KEDEDDWS--CCDTLEGHESTVWSISFDGSGDRIVSC-SDDKTVRIWKSYPPG 216
Query: 293 NQPSCIAS 300
NQ + S
Sbjct: 217 NQEGVVVS 224
Score = 132 (51.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 50/218 (22%), Positives = 92/218 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CNLTLEH-HTDKVQAVAWNHHS 177
H D V +AW+ +LAS DK ++IW K C LE H ++++ W+
Sbjct: 4 HEDRVWSVAWSPN-GFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCG 62
Query: 178 PQILLSGSFDRSVVMKDARISTH--SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235
L S SFD + + D + + +V+S+ W S + + G K
Sbjct: 63 T-FLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWS--VSGSLLATC--GRDKS 117
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
I + D + + + +H+H + V + ++P +LA+ S D +KL+ +
Sbjct: 118 VWIWEVQEDDE---YECASVIHSHTQDVKKVVWHP-TKEILASCSYDDTIKLYKEDEDDW 173
Query: 296 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
SC + V+S++F +++ K + IW
Sbjct: 174 SCCDTLEGHESTVWSISFDGSGDRIVSCSDDK-TVRIW 210
Score = 130 (50.8 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 59/188 (31%), Positives = 83/188 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIW--DVAAGKCNLTLEHHTDKVQAVAWNHHSP 178
HT V + W+ + ILAS S D +K++ D C TLE H V +++++
Sbjct: 138 HTQDVKKVVWHPT-KEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFDGSGD 196
Query: 179 QILLSGSFDRSV-VMKDARISTHSGF-------KWAVAADV----ESLAWDPHAEHSFVV 226
+I+ S S D++V + K G KW + + +D H S V
Sbjct: 197 RIV-SCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVH--WSKVS 253
Query: 227 SLEDGTIKGFD-IRTAKSDPDSTSQQSSFTL-----HAHDKAVCTISYNPLVPNLLATGS 280
L T G D IR K D +S Q SF L AH V +I ++P N+LAT S
Sbjct: 254 GLI-ATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCS 312
Query: 281 TDKMVKLW 288
D VKLW
Sbjct: 313 DDGTVKLW 320
Score = 38 (18.4 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 65 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEE 100
G F+A S + IWD E + + L G + E
Sbjct: 62 GTFLASASFDATTCIWD-QKSGEFECNATLEGHENE 96
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 163 (62.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 60/220 (27%), Positives = 97/220 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H DS LA++ + ++ +AS D ++K+WD+ +G C T E HT V AV + Q+
Sbjct: 344 HFDSTNSLAYSPDGSRVV-TASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRG-QV 401
Query: 181 LLSGSFDRSVVMKDA-RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ S S D +V D R F LA DP E VV G++ FDI
Sbjct: 402 MFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGE---VVCA--GSLDNFDIH 456
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
T Q L H+ V +S++ ++LA+ S DK +++W +
Sbjct: 457 VWSVQ---TGQLLD-ALSGHEGPVSCLSFSQ-ENSVLASASWDKTIRIWSIFGRSQQ--V 509
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339
V +++ D V A+ KG++ I++ + DA
Sbjct: 510 EPIEVYSDVLALSMRPDGKEV-AVSTLKGQISIFN-IEDA 547
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 150 (57.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
+ SAD+ +KIWD+A+GK L+L H V+ V + SP + G D+ V D +
Sbjct: 220 TGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE-DKQVKCWDLEYNK 278
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259
+ V L P + V D T + +D+RT + S TL H
Sbjct: 279 VIRHYHGHLSAVYGLDLHPTID-VLVTCSRDSTARIWDVRT---------KASVHTLSGH 328
Query: 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
AV T+ P ++ TGS D ++LWDL
Sbjct: 329 TNAVATVRCQAAEPQII-TGSHDTTIRLWDL 358
Score = 51 (23.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 52 MAWLDCPLKDREKGN-FMAVGSMEPAIEIWDL 82
+ W+ C E GN + GS + I+IWDL
Sbjct: 203 LGWVRCIAV--EPGNQWFVTGSADRTIKIWDL 232
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 150 (57.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
+ SAD+ +KIWD+A+GK L+L H V+ V + SP + G D+ V D +
Sbjct: 220 TGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE-DKQVKCWDLEYNK 278
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259
+ V L P + V D T + +D+RT + S TL H
Sbjct: 279 VIRHYHGHLSAVYGLDLHPTLD-VLVTCSRDSTARIWDVRT---------KASVHTLSGH 328
Query: 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
AV T+ P ++ TGS D ++LWDL
Sbjct: 329 TNAVATVRCQAAEPQII-TGSHDTTIRLWDL 358
Score = 51 (23.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 52 MAWLDCPLKDREKGN-FMAVGSMEPAIEIWDL 82
+ W+ C E GN + GS + I+IWDL
Sbjct: 203 LGWVRCIAV--EPGNQWFVTGSADRTIKIWDL 232
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 150 (57.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
+ SAD+ +KIWD+A+GK L+L H V+ V + SP + G D+ V D +
Sbjct: 221 TGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE-DKQVKCWDLEYNK 279
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259
+ V L P + V D T + +D+RT + S TL H
Sbjct: 280 VIRHYHGHLSAVYGLDLHPTID-VLVTCSRDSTARIWDVRT---------KASVHTLSGH 329
Query: 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
AV T+ P ++ TGS D ++LWDL
Sbjct: 330 TNAVATVRCQAAEPQII-TGSHDTTIRLWDL 359
Score = 51 (23.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 52 MAWLDCPLKDREKGN-FMAVGSMEPAIEIWDL 82
+ W+ C E GN + GS + I+IWDL
Sbjct: 204 LGWVRCIAV--EPGNQWFVTGSADRTIKIWDL 233
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 150 (57.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
+ SAD+ +KIWD+A+GK L+L H V+ V + SP + G D+ V D +
Sbjct: 221 TGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE-DKQVKCWDLEYNK 279
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259
+ V L P + V D T + +D+RT + S TL H
Sbjct: 280 VIRHYHGHLSAVYGLDLHPTID-VLVTCSRDSTARIWDVRT---------KASVHTLSGH 329
Query: 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
AV T+ P ++ TGS D ++LWDL
Sbjct: 330 TNAVATVRCQAAEPQII-TGSHDTTIRLWDL 359
Score = 51 (23.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 52 MAWLDCPLKDREKGN-FMAVGSMEPAIEIWDL 82
+ W+ C E GN + GS + I+IWDL
Sbjct: 204 LGWVRCIAV--EPGNQWFVTGSADRTIKIWDL 233
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 150 (57.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
+ SAD+ +KIWD+A+GK L+L H V+ V + SP + G D+ V D +
Sbjct: 222 TGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE-DKQVKCWDLEYNK 280
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259
+ V L P + V D T + +D+RT + S TL H
Sbjct: 281 VIRHYHGHLSAVYGLDLHPTID-VLVTCSRDSTARIWDVRT---------KASVHTLSGH 330
Query: 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
AV T+ P ++ TGS D ++LWDL
Sbjct: 331 TNAVATVRCQAAEPQII-TGSHDTTIRLWDL 360
Score = 51 (23.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 52 MAWLDCPLKDREKGN-FMAVGSMEPAIEIWDL 82
+ W+ C E GN + GS + I+IWDL
Sbjct: 205 LGWVRCIAV--EPGNQWFVTGSADRTIKIWDL 234
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/220 (28%), Positives = 100/220 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V +A+N E +LA AS+ +K+WD+ K H AV + H +
Sbjct: 57 HTSPVDSVAFNSEEVLVLAGASSGV-IKLWDLEESKMVRAFTGHRSNCSAVEF-HPFGEF 114
Query: 181 LLSGSFDRSVVMKDAR----ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKG 235
L SGS D ++ + D R I T+ G + ++ + P +VVS D +K
Sbjct: 115 LASGSSDTNLRVWDTRKKGCIQTYKGH----TRGISTIEFSPDGR--WVVSGGLDNVVKV 168
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
+D+ T+ + H+ + ++ ++PL LLATGS D+ VK WDL +
Sbjct: 169 WDL---------TAGKLLHEFKCHEGPIRSLDFHPL-EFLLATGSADRTVKFWDLETFE- 217
Query: 296 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG-KLEIWD 334
I + P+A V ++AF D L G G K+ W+
Sbjct: 218 -LIGTTRPEATGVRAIAFHPDGQ-TLFCGLDDGLKVYSWE 255
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 49/215 (22%), Positives = 95/215 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ +V L+ K+ +L + D +V +W + ++L HT V +VA+N S ++
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFN--SEEV 71
Query: 181 L-LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L L+G+ + + D S ++ ++ + P E F+ S T ++R
Sbjct: 72 LVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE--FLASGSSDT----NLR 125
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
D+ + T H + + TI ++P + +G D +VK+WDL+ + +
Sbjct: 126 VW----DTRKKGCIQTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWDLTAGK--LLH 178
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
G + S+ F F+LA G + ++ WD
Sbjct: 179 EFKCHEGPIRSLDF-HPLEFLLATGSADRTVKFWD 212
>CGD|CAL0004530 [details] [associations]
symbol:CDH1 species:5476 "Candida albicans" [GO:0007096
"regulation of exit from mitosis" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0010997 "anaphase-promoting complex binding"
evidence=IEA] [GO:0097027 "ubiquitin-protein ligase activator
activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0030996 "cell cycle arrest in response to nitrogen starvation"
evidence=IEA] [GO:0010697 "negative regulation of spindle pole body
separation" evidence=IEA] [GO:0008361 "regulation of cell size"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:2000600 "positive regulation of cyclin
catabolic process" evidence=IEA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=IEA] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0004530 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0007096
HOGENOM:HOG000195514 KO:K03364 EMBL:AACQ01000031 EMBL:AACQ01000030
RefSeq:XP_719530.1 RefSeq:XP_719654.1 ProteinModelPortal:Q5ACY4
STRING:Q5ACY4 GeneID:3638700 GeneID:3638814 KEGG:cal:CaO19.2084
KEGG:cal:CaO19.9631 Uniprot:Q5ACY4
Length = 597
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/215 (28%), Positives = 100/215 (46%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D V L W + LA ++ V+IWD KC T+ H+ +V ++AWN H IL
Sbjct: 334 DKVTSLNWIGTGTH-LAIGTSKGLVEIWDATRIKCIRTMTGHSLRVSSLAWNEH---ILS 389
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS DR+++ +D RI H K+ +V L W+ E+ D + +D
Sbjct: 390 SGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKWNVE-ENKLASGGNDNNLFVWD---- 444
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWD-LSNNQPSCI 298
+P Q FT H AV I+++P +LA+G + DK +K W+ L+ N +
Sbjct: 445 GLNPKPLHQ---FT--DHTAAVKAIAWSPHQRGILASGGGTADKTIKTWNTLTGNLVHDV 499
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+ + ++S +E V G S+ ++ +W
Sbjct: 500 NTGSQVCNLIWSKNSNE---LVSTHGYSRNQIIVW 531
>UNIPROTKB|Q5ACY4 [details] [associations]
symbol:CDH1 "Putative uncharacterized protein CDH1"
species:237561 "Candida albicans SC5314" [GO:0007096 "regulation of
exit from mitosis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004530 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0007096 HOGENOM:HOG000195514 KO:K03364 EMBL:AACQ01000031
EMBL:AACQ01000030 RefSeq:XP_719530.1 RefSeq:XP_719654.1
ProteinModelPortal:Q5ACY4 STRING:Q5ACY4 GeneID:3638700
GeneID:3638814 KEGG:cal:CaO19.2084 KEGG:cal:CaO19.9631
Uniprot:Q5ACY4
Length = 597
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/215 (28%), Positives = 100/215 (46%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D V L W + LA ++ V+IWD KC T+ H+ +V ++AWN H IL
Sbjct: 334 DKVTSLNWIGTGTH-LAIGTSKGLVEIWDATRIKCIRTMTGHSLRVSSLAWNEH---ILS 389
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS DR+++ +D RI H K+ +V L W+ E+ D + +D
Sbjct: 390 SGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKWNVE-ENKLASGGNDNNLFVWD---- 444
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWD-LSNNQPSCI 298
+P Q FT H AV I+++P +LA+G + DK +K W+ L+ N +
Sbjct: 445 GLNPKPLHQ---FT--DHTAAVKAIAWSPHQRGILASGGGTADKTIKTWNTLTGNLVHDV 499
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+ + ++S +E V G S+ ++ +W
Sbjct: 500 NTGSQVCNLIWSKNSNE---LVSTHGYSRNQIIVW 531
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 153 (58.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 53/175 (30%), Positives = 86/175 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHHSP 178
H ++ + W+ LASAS D IW ++G+ CN TLE H ++V++V+W+ S
Sbjct: 58 HKRTIREIRWSP-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SG 115
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAVAA-----DVESLAWDPHAEHSFVVSLEDGTI 233
+L + S D+SV + + ++ F+ A DV+ + W P + S D TI
Sbjct: 116 GLLATCSRDKSVWIWE--VAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASY-DNTI 172
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
K F SD D T+ TL +H V +I ++ L++ S DK +K+W
Sbjct: 173 KMFAESQLDSDWDCTA-----TLSSHTSTVWSIDFDAEGDRLVSC-SDDKTLKIW 221
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 64 KGNFMAVGSMEPAIEIWDL 82
KGN A + AI +W L
Sbjct: 25 KGNVFASCGEDKAIRVWSL 43
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 153 (58.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 53/175 (30%), Positives = 86/175 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHHSP 178
H ++ + W+ LASAS D IW ++G+ CN TLE H ++V++V+W+ S
Sbjct: 58 HKRTIREIRWSP-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SG 115
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAVAA-----DVESLAWDPHAEHSFVVSLEDGTI 233
+L + S D+SV + + ++ F+ A DV+ + W P + S D TI
Sbjct: 116 GLLATCSRDKSVWIWE--VAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASY-DNTI 172
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
K F SD D T+ TL +H V +I ++ L++ S DK +K+W
Sbjct: 173 KMFAESQLDSDWDCTA-----TLSSHTSTVWSIDFDAEGDRLVSC-SDDKTLKIW 221
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 64 KGNFMAVGSMEPAIEIWDL 82
KGN A + AI +W L
Sbjct: 25 KGNVFASCGEDKAIRVWSL 43
>TAIR|locus:2119141 [details] [associations]
symbol:CDC20.2 "AT4G33260" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 HOGENOM:HOG000195514
EMBL:AF029263 IPI:IPI00519553 PIR:T05977 RefSeq:NP_195052.1
UniGene:At.48930 ProteinModelPortal:Q9S7I8 SMR:Q9S7I8 STRING:Q9S7I8
EnsemblPlants:AT4G33260.1 GeneID:829462 KEGG:ath:AT4G33260
TAIR:At4g33260 InParanoid:Q9S7I8 OMA:AVALDNC PhylomeDB:Q9S7I8
ProtClustDB:CLSN2915879 ArrayExpress:Q9S7I8 Genevestigator:Q9S7I8
Uniprot:Q9S7I8
Length = 447
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 55/214 (25%), Positives = 101/214 (47%)
Query: 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH-HTDKVQAVAWNHHSPQILLS 183
V + W + R++ + + +V++WD A+ + TL+ H +V ++AWN+H IL +
Sbjct: 175 VTSINWAPDGRHVAVGLN-NSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTT 230
Query: 184 GSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAK 242
G D ++ D RI + + +V L W + D + +D A
Sbjct: 231 GGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ-LASGGNDNVVHIWDRSVAS 289
Query: 243 SDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST--DKMVKLWDLSNNQPSCIAS 300
S+ ST+Q L H AV +++ P NLLATG D+ +K W+ +C+ S
Sbjct: 290 SN--STTQWLH-RLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTG--ACLNS 344
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
+ V S+ +S++ +L+ G ++ +L +W
Sbjct: 345 VDT-GSQVCSLLWSKNERELLSSHGFTQNQLTLW 377
>TAIR|locus:2121328 [details] [associations]
symbol:AT4G28450 "AT4G28450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0080008
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AF372943
EMBL:AY045624 EMBL:AY143901 IPI:IPI00548928 RefSeq:NP_567810.5
UniGene:At.2008 ProteinModelPortal:Q93VK1 SMR:Q93VK1 STRING:Q93VK1
PRIDE:Q93VK1 EnsemblPlants:AT4G28450.1 GeneID:828962
KEGG:ath:AT4G28450 TAIR:At4g28450 InParanoid:Q93VK1
PhylomeDB:Q93VK1 ProtClustDB:CLSN2691268 Genevestigator:Q93VK1
Uniprot:Q93VK1
Length = 452
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 51/193 (26%), Positives = 89/193 (46%)
Query: 141 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 200
A+A Q+ IW+ + + + TD V +V +N P +L + + DRS+ + D R+S+
Sbjct: 179 ATAGAQLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSS- 237
Query: 201 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD 260
+ K + S+AW+P + + EDG+ FD R K D + H
Sbjct: 238 AARKIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSFDGR--KLDEAKCVHKD------HV 289
Query: 261 KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFV 320
AV I ++P + TGS D+ V+++ + I + VF V +S D+ +V
Sbjct: 290 SAVMDIDFSPTGREFV-TGSYDRSVRIFPYNGGHSREIY-HTKRMQRVFCVKYSCDATYV 347
Query: 321 LAIGGSKGKLEIW 333
++ G L +W
Sbjct: 348 IS-GSDDTNLRLW 359
>TAIR|locus:2119151 [details] [associations]
symbol:CDC20.1 "AT4G33270" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSN2915879 EMBL:BT026138 IPI:IPI00524152 PIR:T05978
RefSeq:NP_195053.1 UniGene:At.368 SMR:Q9SZA4 IntAct:Q9SZA4
STRING:Q9SZA4 EnsemblPlants:AT4G33270.1 GeneID:829463
KEGG:ath:AT4G33270 TAIR:At4g33270 InParanoid:Q9SZA4
Genevestigator:Q9SZA4 Uniprot:Q9SZA4
Length = 457
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 55/214 (25%), Positives = 101/214 (47%)
Query: 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH-HTDKVQAVAWNHHSPQILLS 183
V + W + R++ + + +V++WD A+ + TL+ H +V ++AWN+H IL +
Sbjct: 185 VTSINWAPDGRHVAVGLN-NSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTT 240
Query: 184 GSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAK 242
G D ++ D RI + + +V L W + D + +D A
Sbjct: 241 GGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ-LASGGNDNVVHIWDRSVAS 299
Query: 243 SDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST--DKMVKLWDLSNNQPSCIAS 300
S+ ST+Q L H AV +++ P NLLATG D+ +K W+ +C+ S
Sbjct: 300 SN--STTQWLH-RLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTG--ACLNS 354
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIW 333
+ V S+ +S++ +L+ G ++ +L +W
Sbjct: 355 VDT-GSQVCSLLWSKNERELLSSHGFTQNQLTLW 387
>TAIR|locus:2159078 [details] [associations]
symbol:FZR3 "AT5G13840" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000226 "microtubule cytoskeleton organization" evidence=RCA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0006306 "DNA methylation" evidence=RCA] [GO:0006342 "chromatin
silencing" evidence=RCA] [GO:0007276 "gamete generation"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0031047 "gene silencing by RNA" evidence=RCA] [GO:0032875
"regulation of DNA endoreduplication" evidence=RCA] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0042127 "regulation of
cell proliferation" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051225
"spindle assembly" evidence=RCA] [GO:0051302 "regulation of cell
division" evidence=RCA] [GO:0051510 "regulation of unidimensional
cell growth" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 EMBL:AB005230
HOGENOM:HOG000195514 KO:K03364 EMBL:AY099581 EMBL:BT002165
IPI:IPI00518888 RefSeq:NP_001190305.1 RefSeq:NP_196888.2
UniGene:At.32010 HSSP:Q04724 ProteinModelPortal:Q8LPL5 SMR:Q8LPL5
IntAct:Q8LPL5 STRING:Q8LPL5 PaxDb:Q8LPL5 PRIDE:Q8LPL5
EnsemblPlants:AT5G13840.1 EnsemblPlants:AT5G13840.2 GeneID:831230
KEGG:ath:AT5G13840 GeneFarm:2927 TAIR:At5g13840 InParanoid:Q8LPL5
OMA:RQINHQN PhylomeDB:Q8LPL5 ProtClustDB:CLSN2690869
Genevestigator:Q8LPL5 Uniprot:Q8LPL5
Length = 481
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 56/216 (25%), Positives = 104/216 (48%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
DSV + W +E + ++ ++ QV++WD K T+ H + +AWN +IL
Sbjct: 216 DSVCSVQWTRE-GSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNS---RILS 271
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS DR+++ D R+ + K ++V L W H + D + ++
Sbjct: 272 SGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWS-HDDRELASGGNDNQLLVWN---- 326
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSN-NQPSCI 298
+ SQQ L H AV I+++P +LLA+G + D+ ++ W+ +N NQ + I
Sbjct: 327 -----NHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSI 381
Query: 299 ASRNPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIW 333
+ V ++A+S++ + V G S+ ++ +W
Sbjct: 382 DT----GSQVCNLAWSKNVNEIVSTHGYSQNQIMLW 413
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 45/172 (26%), Positives = 74/172 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V GL W+ + R LAS D Q+ +W+ + + L L HT V+A+ W+ H +
Sbjct: 297 HKSEVCGLKWSHDDRE-LASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSL 355
Query: 181 LLSG--SFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
L SG + DR + + + V +LAW + +VS G + I
Sbjct: 356 LASGGGTADRCIRFWNTTNGNQLN-SIDTGSQVCNLAWSKNVNE--IVSTH-GYSQN-QI 410
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
K P S TL H V ++ +P + TG+ D+ ++ W++
Sbjct: 411 MLWKY-P---SMSKVATLTGHSMRVLYLATSP-DGQTIVTGAGDETLRFWNV 457
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 247 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAG 306
+ + + S ++ AH V +S+NP +LATGS DK V LWDL N + + + K
Sbjct: 8 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-D 66
Query: 307 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340
+F V +S + +LA G+ +L +WD LS G
Sbjct: 67 EIFQVQWSPHNETILASSGTDRRLNVWD-LSKIG 99
Score = 132 (51.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 38/156 (24%), Positives = 75/156 (48%)
Query: 149 IWDVAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR---ISTHSG 202
IWD + K + +++ HT +V +++N +S IL +GS D++V + D R + HS
Sbjct: 2 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS- 60
Query: 203 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI-----RTAKSDPDSTSQQSSFTLH 257
F+ + ++ + W PH E S D + +D+ + D + + F
Sbjct: 61 FE-SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHG 119
Query: 258 AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293
H + S+NP P ++ + S D ++++W ++ N
Sbjct: 120 GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 155
Score = 118 (46.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQ 179
HT V L++N ILA+ SADK V +WD+ K L + E H D++ V W+ H+
Sbjct: 20 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 79
Query: 180 ILLSGSFDRSVVMKD 194
IL S DR + + D
Sbjct: 80 ILASSGTDRRLNVWD 94
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 149 (57.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
+ SAD+ +KIWD+A+GK L+L H V+ V + SP + G D+ V D +
Sbjct: 223 TGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGE-DKQVKCWDLEYNK 281
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259
+ V L P + V D T + +D+RT + S TL H
Sbjct: 282 VIRHYHGHLSAVYGLDLHPTID-VLVTCSRDSTARIWDVRT---------KASVHTLSGH 331
Query: 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
AV T+ P ++ TGS D ++LWDL
Sbjct: 332 TNAVATVKCQAAEPQVV-TGSHDTTIRLWDL 361
Score = 51 (23.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 52 MAWLDCPLKDREKGN-FMAVGSMEPAIEIWDL 82
+ W+ C E GN + GS + I+IWDL
Sbjct: 206 LGWVRCIAV--EPGNQWFVTGSADRTIKIWDL 235
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/135 (35%), Positives = 65/135 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA--GK-CNLTLEH-HTDKVQAVAWNHH 176
HT SV L W+ + AS SAD ++IWD+ A GK C LT H V ++W+
Sbjct: 259 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRR 318
Query: 177 SPQILLSGSFDRSVVMKDARI----STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 232
P LLSG D ++ + D R S + FK VA V S+ W P F S D
Sbjct: 319 EP-FLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAP-VTSVEWHPQDSGVFAASGADNQ 376
Query: 233 IKGFDIRTAKSDPDS 247
I +D+ + DP+S
Sbjct: 377 ITQWDLAVER-DPES 390
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 44/181 (24%), Positives = 73/181 (40%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVA-AGKCNLTLEH---HTDKVQAVAWNHH 176
H L W+ L + K + +W G N+ HT V+ + W+
Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVEDLQWSPT 271
Query: 177 SPQILLSGSFDRSVVMKDARISTHSGFKWAVAA----DVESLAWDPHAEHSFVVSL-EDG 231
+ S S D S+ + D R + AA DV ++W F++S +DG
Sbjct: 272 EDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWS--RREPFLLSGGDDG 329
Query: 232 TIKGFDIRTAKS-DPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
T+K +D+R KS P +T +Q H V ++ ++P + A D + WDL
Sbjct: 330 TLKVWDLRQFKSGSPVATFKQ-------HVAPVTSVEWHPQDSGVFAASGADNQITQWDL 382
Query: 291 S 291
+
Sbjct: 383 A 383
Score = 124 (48.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 50/180 (27%), Positives = 74/180 (41%)
Query: 164 HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV--------AADVESLA 215
H + A+ W+ P LL+G +++ + T G W V VE L
Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTP---TDGG-SWNVDQRPFVGHTRSVEDLQ 267
Query: 216 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 275
W P + F D +I+ +DIR A P + T AHD V IS++ P L
Sbjct: 268 WSPTEDTVFASCSADASIRIWDIRAA---PGKACMLT--TAAAHDGDVNVISWSRREPFL 322
Query: 276 LATGSTDKMVKLWDLSN-NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
L+ G D +K+WDL S +A+ V SV + V A G+ ++ WD
Sbjct: 323 LS-GGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWD 381
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 154 (59.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 59/214 (27%), Positives = 95/214 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D++ + ++ + LAS S D +KIW + L H D V V ++ S +
Sbjct: 19 HRDAITSVDFSLNKKQ-LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSP-SGHL 76
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ SGS D++V + + S A A V S+ + + S V + +D TIK + +
Sbjct: 77 VASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQ-SLVTASDDKTIKVWTVHR 135
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
Q+ F+L H V ++P L+A+ S DK VKLWD ++ + CI S
Sbjct: 136 ---------QKFLFSLSQHINWVRCARFSP-DGRLIASASDDKTVKLWDKTSRE--CIHS 183
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
G V F + A G K +++WD
Sbjct: 184 FCEHGGFANHVEFHPSGTCIAAAGTDK-TVKVWD 216
Score = 135 (52.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 56/217 (25%), Positives = 100/217 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT +V + ++ + ++ L +AS DK +K+W V K +L H + V+ ++ ++
Sbjct: 103 HTATVRSVHFSSDGQS-LVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG-RL 160
Query: 181 LLSGSFDRSVVM--KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
+ S S D++V + K +R HS + A+ + + P + D T+K +D+
Sbjct: 161 IASASDDKTVKLWDKTSRECIHSFCEHGGFAN--HVEFHPSGT-CIAAAGTDKTVKVWDV 217
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298
R + Q H AV ++S++P N L T S D +K+ DL + +
Sbjct: 218 RMNR-----LLQH----YQVHTAAVNSLSFHPS-GNYLITASNDSTLKILDLLEGR--LL 265
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
+ + G VAFS F A GGS ++ +W T
Sbjct: 266 YTLHGHQGPATCVAFSRTGDF-FASGGSDEQVMVWKT 301
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 68 MAVGSMEPAIEIWDLDVIDEVQPHVILGGID 98
+A GSM+ ++IW + +++ + ++G D
Sbjct: 35 LASGSMDSCLKIWSMK--PQMRAYCLVGHKD 63
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 57/208 (27%), Positives = 91/208 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V + W+ +++L S D VK+WD +G+ + H + VQ V WN + +
Sbjct: 90 HGWDVKSVDWHPT-KSLLVSGGKDYLVKLWDAKSGRELRSFHGHKNIVQCVKWNQNGNWV 148
Query: 181 LLSGSFDRSVVMKDAR-ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L + S D+ + + D R + F+ DV +LAW P E FV DG I F
Sbjct: 149 L-TASKDQIIKLYDIRSMKELESFR-GHNKDVTALAWHPFHEEYFVSGSYDGAI--FHWL 204
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
P Q +AHD +V ++++P V LL +G D + W N+P +
Sbjct: 205 VGHETP-----QIEIN-NAHDNSVWDLAWHP-VGYLLCSGGNDHATRFW--CRNRPGDLT 255
Query: 300 SRNPKAGAVFSVAFSEDSP-FV-LAIGG 325
+G + + + P F A+GG
Sbjct: 256 RDKYNSGQM--QGYGDQHPAFAGRAMGG 281
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 54/213 (25%), Positives = 92/213 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H +SV L++ + S S D VK+WD A + +L H V++V W H + +
Sbjct: 48 HRESVRDLSFCRTDLKF-CSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDW-HPTKSL 105
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L+SG D V + DA+ V+ + W+ + S +D IK +DIR+
Sbjct: 106 LVSGGKDYLVKLWDAKSGRELRSFHGHKNIVQCVKWNQNGNWVLTAS-KDQIIKLYDIRS 164
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
K + SF H+K V ++++P +GS D + W + + P I
Sbjct: 165 MK-------ELESF--RGHNKDVTALAWHPFHEEYFVSGSYDGAIFHWLVGHETPQ-IEI 214
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
N +V+ +A+ ++L GG+ W
Sbjct: 215 NNAHDNSVWDLAWHPVG-YLLCSGGNDHATRFW 246
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 156 (60.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 64/233 (27%), Positives = 112/233 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
+ D ++ + + + NI+ + +++ ++K +D+ + + L H D V +V + I
Sbjct: 383 YNDEIIDIKYIND-DNIIVATNSN-EIKTYDLNTKRAQV-LRGHEDLVMSVDVSADGKHI 439
Query: 181 LLSGSFDRSVVMKD-------ARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTI 233
+ SGS D+S ++ D A+++ H+G VA L P + + +D TI
Sbjct: 440 I-SGSRDKSAMIWDLEKKESIAQLTGHTGVISCVA-----LPKKPSTSMFAITASDDRTI 493
Query: 234 K---GFDIRTAKSDPDSTSQQ----SSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVK 286
K GF ++ DS + +S T AH+K + +IS P + AT S D VK
Sbjct: 494 KLWKGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPN-DKIFATASQDSYVK 552
Query: 287 LWDLSNNQPSCIASRNPKAGAVFSVAFSE-DSPFVLAIGGSKGKLEIWDTLSD 338
LW+++N +P I S V+ V FS D F+ + G ++IW +LSD
Sbjct: 553 LWNVNNLEP--ITSIKAHRRGVWHVEFSPIDQCFLTC--SADGTIKIW-SLSD 600
Score = 49 (22.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 65 GNFMAVGSMEPAIEIWDLD 83
GN +A S + +++WDL+
Sbjct: 141 GNIVASASSDKTVKVWDLE 159
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 53/215 (24%), Positives = 91/215 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + V +A+N + + +A+ S DK K+W GKC T HT ++ +A+N S +
Sbjct: 133 HRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST-L 191
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ +GS D + + D A++ SL ++ + V D T +D+
Sbjct: 192 VATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR-LVTGSFDHTAILWDV-- 248
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
P S + L H + + +N +L+AT S DK K+WD Q C+A+
Sbjct: 249 ----P---SGRKVHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVWDAEGGQ--CLAT 298
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335
V V F+ + A + G ++ T
Sbjct: 299 LLGHNDEVLDVCFNYTGQLI-ATASADGTSRVFST 332
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/215 (26%), Positives = 100/215 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +A+NK + + S D+ KIWD A+G+ TLE H + V A+A+N+
Sbjct: 91 HILPLTNVAFNKS-GSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 181 LLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ +GSFD++ + A F+ A++ LA++P + S+ D T K +D+
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFR-GHTAEIVCLAFNPQSTLVATGSM-DTTAKLWDV- 206
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
+S + S TL H + ++ +N + L TGS D LWD+ + + +
Sbjct: 207 ------ESGEEVS--TLAGHFAEIISLCFNT-TGDRLVTGSFDHTAILWDVPSGRKVHVL 257
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
S + G + V F+ D + K ++WD
Sbjct: 258 SGH--RGEISCVQFNWDCSLIATASLDKS-CKVWD 289
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 57/218 (26%), Positives = 93/218 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT ++ LA+N + ++A+ S D K+WDV +G+ TL H ++ ++ +N +
Sbjct: 176 HTAEIVCLAFNPQ-STLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR- 233
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
L++GSFD + ++ D SG K V L+ E S V D ++ I T
Sbjct: 234 LVTGSFDHTAILWDVP----SGRK------VHVLSGH-RGEISCVQFNWDCSL----IAT 278
Query: 241 AKSDP-----DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
A D D+ Q TL H+ V + +N L+AT S D +++ Q
Sbjct: 279 ASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFN-YTGQLIATASADGTSRVFSTDTFQ- 336
Query: 296 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
C+ G + V F+ VL K +W
Sbjct: 337 -CLCQLEGHKGEISKVCFNAQGSRVLTASVDKTS-RVW 372
>UNIPROTKB|Q5H7C0 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9823 "Sus scrofa" [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0090129 "positive regulation
of synapse maturation" evidence=ISS] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISS] [GO:0005680
"anaphase-promoting complex" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0005815
GO:GO:0005680 GO:GO:0000922 GO:GO:0031145 GO:GO:0090129
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OMA:RTPGKSN
OrthoDB:EOG4CC414 GeneTree:ENSGT00580000081599 EMBL:AB192873
RefSeq:NP_001116566.1 UniGene:Ssc.17001 ProteinModelPortal:Q5H7C0
STRING:Q5H7C0 Ensembl:ENSSSCT00000004368 GeneID:397379
KEGG:ssc:397379 Uniprot:Q5H7C0
Length = 499
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 55/215 (25%), Positives = 99/215 (46%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D V +AW KE N LA ++ +V++WDV K + H+ +V ++ WN + IL
Sbjct: 227 DYVSSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLCWNSY---ILS 282
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS + D R++ H + + +V L W P H L G +
Sbjct: 283 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH-----LASGGNDNL-VNVW 336
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIA 299
S P T H AV +++ P N+LATG ++D+ +++W++ + +C++
Sbjct: 337 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--ACLS 394
Query: 300 SRNPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIW 333
+ + + V S+ +S + G ++ +L IW
Sbjct: 395 AVDAHS-QVCSILWSPHYKELISGHGFAQNQLVIW 428
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 62/227 (27%), Positives = 94/227 (41%)
Query: 123 DSVLGLA-WNKEFRNILASASADKQVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQ 179
D L L W+ N+LA A D V +W ++G L +E D V +VAW
Sbjct: 184 DYYLNLVDWSSG--NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGDYVSSVAWIKEG-N 239
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
L G+ V + D + + +A V SL W+ + S G I D+R
Sbjct: 240 YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLCWNSYILSS---GSRSGHIHHHDVR 296
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
A + TL H + VC + + P +L A+G D +V +W + + +
Sbjct: 297 VA--------EHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPGEGGWVP 347
Query: 300 SRN--PKAGAVFSVAFSEDSPFVLAIGG--SKGKLEIWDTLSDAGIS 342
+ GAV +VA+ VLA GG S + IW+ S A +S
Sbjct: 348 LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 394
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 46/207 (22%), Positives = 91/207 (43%)
Query: 141 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 200
A++ + V IWD + E D + V +N+ +L S DRS+V+ D R S+
Sbjct: 163 ATSGENVSIWDYSRDTPVTKFEWGADTLPVVKFNYTETSVLASAGMDRSIVIYDLRTSSP 222
Query: 201 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD 260
K S++W+P +FV ED + +D+R K ++ H
Sbjct: 223 LT-KLITKLRTNSISWNPMEAFNFVAGSEDHNLYMYDMRNLK--------RALHVYKDHV 273
Query: 261 KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFV 320
AV ++ ++P ++ GS DK ++++++ + + V +V FS D+ ++
Sbjct: 274 SAVMSVDFSPTGQEFVS-GSYDKTIRIYNVREGHSRDVY-HTKRMQRVTAVKFSMDAQYI 331
Query: 321 LAIGGSKGKLEIWDTLSDAGISNRFSK 347
+ G + +W + + S R ++
Sbjct: 332 FS-GSDDSNVRLWRARASSRASIRSTR 357
>ZFIN|ZDB-GENE-030131-2958 [details] [associations]
symbol:cstf1 "cleavage stimulation factor, 3'
pre-RNA, subunit 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-2958 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
HOGENOM:HOG000234077 HOVERGEN:HBG051144 EMBL:BC066520
IPI:IPI00481543 UniGene:Dr.78498 ProteinModelPortal:Q6NYN6
STRING:Q6NYN6 PRIDE:Q6NYN6 InParanoid:Q6NYN6 ArrayExpress:Q6NYN6
Bgee:Q6NYN6 Uniprot:Q6NYN6
Length = 431
Score = 157 (60.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD-ARISTHSGFKWAVAADV-ESLAWD 217
TL H D+V +++ H + QIL SGS D ++ + D ++ S FK A++ S+++
Sbjct: 168 TLYDHVDEVTCLSF-HPTEQILASGSRDYTLKLFDYSKPSAKRAFKHVQEAEMLRSISFH 226
Query: 218 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 277
P + +V + T++ +D+ T + S L H +C + YNP N
Sbjct: 227 PSGDF-LLVGTQHPTLRLYDVNTFQCFV------SCNPLDQHTDTICGVCYNPSA-NSYV 278
Query: 278 TGSTDKMVKLWDLSNNQPSCIASRNPKA--GA-VFSVAFSEDSPFVLAIGGSKGKLEIWD 334
T S D +KLWD +N+ C+ + + KA GA V S FS++S ++L+ G ++W+
Sbjct: 279 TCSKDGSIKLWDGVSNR--CVTTFD-KAHEGAEVCSAVFSKNSKYILSTG-KDSVAKLWE 334
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 137 ILASASADKQVKIWD 151
++A+ SAD +KI D
Sbjct: 122 LIATGSADASIKILD 136
>DICTYBASE|DDB_G0276815 [details] [associations]
symbol:DDB_G0276815 "WD repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 dictyBase:DDB_G0276815 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0016567 GO:GO:0030529
EMBL:AAFI02000019 GO:GO:0006364 GO:GO:0080008 KO:K11806 OMA:CASDRSI
InterPro:IPR007287 Pfam:PF04158 RefSeq:XP_642903.1
ProteinModelPortal:Q7KWL3 STRING:Q7KWL3 EnsemblProtists:DDB0168265
GeneID:8620769 KEGG:ddi:DDB_G0276815 Uniprot:Q7KWL3
Length = 445
Score = 152 (58.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 53/209 (25%), Positives = 95/209 (45%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
+ S V+IW TL+ + V +N +L S + DR +++ D R ++
Sbjct: 172 ATSGPTSVEIWKHQRSTPIQTLQWGHSTITKVKFNPIETHLLASCTTDRDIILYDIRENS 231
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA- 258
+ K + S+AW P + ++ ED + +DIR + T+H
Sbjct: 232 PAQ-KLTTSMRSNSIAWCPTESFTLAIANEDENVYQYDIRNLSK---------AMTVHRD 281
Query: 259 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP 318
H +V I Y+P +++ GS DK ++++ + + + + N + +FSV F+ DS
Sbjct: 282 HVGSVLDIDYSPTGREIVS-GSYDKTIRIFPVDSYKSREVYYTN-RMQRIFSVLFTADSR 339
Query: 319 FVLAIGGSKGKLEIWDTLSDA--GI-SNR 344
F+L+ G + +W S A GI SNR
Sbjct: 340 FILS-GSDDMNIRVWKANSSAPLGILSNR 367
Score = 44 (20.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 66 NFMAVGSMEPAIEIWDLDVIDE---VQPH 91
N +A GS + I++W+L + E VQ H
Sbjct: 80 NNVASGSCDGVIKLWNLTSLTERTTVQAH 108
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 49/173 (28%), Positives = 80/173 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV-AAGK--CNLTLEH-HTDKVQAVAWNHH 176
H SV LAW+ +LAS SAD +K+WD +A K C T++ H V ++WN H
Sbjct: 274 HKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH 333
Query: 177 SPQILLSGSFDRSVV---MKDARISTHSG-FKWAVAADVESLAWDPHAEHSFVVSLEDGT 232
+++SG D + +K + FK+ + + S+ W PH +F+ S ED
Sbjct: 334 E-NLIVSGGDDGELKIWSLKTIQFGQPVALFKYH-NSPITSVDWHPHETTTFMASGEDDQ 391
Query: 233 IKGFDIRT---AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 282
+DI T +++ + Q F +H V + ++ +P L S D
Sbjct: 392 TTIWDIATEADGQTNIEGVPPQLMF-VHMGQNEVKEVHWHQQIPGLAINTSID 443
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 50/184 (27%), Positives = 77/184 (41%)
Query: 171 VAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAAD--------VESLAWDPHAEH 222
+AW+ L +G + + + + G +WAV A+ VE LAW P E
Sbjct: 234 LAWSSLKTGDLATGDIIKKIYLWQMK----EGGQWAVGANPLTGHKKSVEDLAWSP-TET 288
Query: 223 SFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 281
+ S DG+IK +D R+A D + Q AH+ V IS+N NL+ +G
Sbjct: 289 GLLASCSADGSIKLWDTRSAPKDACVCTVQK-----AHESDVNVISWNRH-ENLIVSGGD 342
Query: 282 DKMVKLWDLSNNQ-PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA- 339
D +K+W L Q +A + SV + G + IWD ++A
Sbjct: 343 DGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEAD 402
Query: 340 GISN 343
G +N
Sbjct: 403 GQTN 406
Score = 115 (45.5 bits), Expect = 0.00078, P = 0.00078
Identities = 41/175 (23%), Positives = 77/175 (44%)
Query: 127 GLAWNKEFRNILASASADKQVKIWDVAAGK-----CNLTLEHHTDKVQAVAWNHHSPQIL 181
GLAW+ LA+ K++ +W + G N L H V+ +AW+ +L
Sbjct: 233 GLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGAN-PLTGHKKSVEDLAWSPTETGLL 291
Query: 182 LSGSFDRSVVMKDARISTHSGFKWAVA----ADVESLAWDPHAEHSFVVSLEDGTIKGFD 237
S S D S+ + D R + V +DV ++W+ H E+ V +DG +K +
Sbjct: 292 ASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENLIVSGGDDGELKIWS 350
Query: 238 IRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL-VPNLLATGSTDKMVKLWDLS 291
++T + Q H+ + ++ ++P +A+G D+ +WD++
Sbjct: 351 LKTIQFG------QPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTT-IWDIA 398
>SGD|S000003934 [details] [associations]
symbol:SOF1 "Essential protein required for biogenesis of the
40S ribosomal subunit" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000003934 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006945 GO:GO:0030686 EMBL:X91488 GO:GO:0032040
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082 KO:K11806
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 OrthoDB:EOG4GXJWG
EMBL:X70052 EMBL:Z73116 PIR:S35323 RefSeq:NP_013090.1
ProteinModelPortal:P33750 SMR:P33750 DIP:DIP-746N IntAct:P33750
MINT:MINT-635582 STRING:P33750 PaxDb:P33750 PeptideAtlas:P33750
EnsemblFungi:YLL011W GeneID:850649 KEGG:sce:YLL011W CYGD:YLL011w
NextBio:966596 Genevestigator:P33750 GermOnline:YLL011W
GO:GO:0000462 Uniprot:P33750
Length = 489
Score = 154 (59.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 46/193 (23%), Positives = 87/193 (45%)
Query: 141 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 200
A+ ++ +WDV K L D + ++ +N + IL S D S+V+ D R ++
Sbjct: 195 ATGGAKIHLWDVNRLKPVSDLSWGADNITSLKFNQNETDILASTGSDNSIVLYDLRTNSP 254
Query: 201 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD 260
+ K ++ W+P +FV + ED +D+R +S H
Sbjct: 255 TQ-KIVQTMRTNAICWNPMEAFNFVTANEDHNAYYYDMRNLS--------RSLNVFKDHV 305
Query: 261 KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFV 320
AV + ++P ++ TGS DK ++++ +N+ S + VF V +S DS ++
Sbjct: 306 SAVMDVDFSPTGDEIV-TGSYDKSIRIYK-TNHGHSREIYHTKRMQHVFQVKYSMDSKYI 363
Query: 321 LAIGGSKGKLEIW 333
++ G G + +W
Sbjct: 364 IS-GSDDGNVRLW 375
Score = 43 (20.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 61 DREKGNFMAVGSMEPAIEIWDLDVID 86
D + NFM S + +++W ++V D
Sbjct: 129 DLKSQNFMLSCSDDKTVKLWSINVDD 154
Score = 40 (19.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 66 NFMAVGSMEPAIEIWDLDVIDE 87
N +A GS + I+ W++ +E
Sbjct: 81 NKLATGSADGVIKYWNMSTREE 102
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 154 (59.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 52/193 (26%), Positives = 95/193 (49%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
++ + S D VK+WD+ K + +T +V AV +N S QI+ SG D + + D R
Sbjct: 167 LVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLR 224
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ + A V L+ +E S+++S D T++ +D+R + + +
Sbjct: 225 QNKLTYTMRGHADSVTGLSLS--SEGSYLLSNAMDNTVRVWDVRPF-APKERCVKIFQGN 281
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP-KAGAVFSVAFS 314
+H +K + S++P + +A GS D+ V +WD ++ + I + P AG++ VAF
Sbjct: 282 VHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRR---ILYKLPGHAGSINEVAFH 337
Query: 315 EDSPFVLAIGGSK 327
D P +L+ K
Sbjct: 338 PDEPIILSASSDK 350
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ +V+ L +N + ++L SAS DK V +WD G+ L+ HT V + PQ+
Sbjct: 109 HSGAVMELHYNTD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ +GS D +V + D R + V ++ ++ ++ + D IK +D+R
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQ-TFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQ 225
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS--CI 298
K ++T+ H +V +S + LL+ + D V++WD+ P C+
Sbjct: 226 NKL---------TYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCV 275
Query: 299 ----ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
+ + + ++S D + A G + + +WDT S
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAA-GSADRFVYVWDTTS 317
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 138 LASASADKQVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
LASA D+ + +W+V G C+ TL+ H+ V + +N +L S S D++V + D+
Sbjct: 82 LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDG-SMLFSASTDKTVAVWDS 139
Query: 196 RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ V S +DGT+K +DIR K T Q +
Sbjct: 140 ETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTY-- 195
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 315
V +++N +++ G D +K+WDL N+ + + A +V ++ S
Sbjct: 196 ------QVLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNKLTY--TMRGHADSVTGLSLSS 246
Query: 316 DSPFVLAIGGSKGKLEIWD 334
+ ++L+ + +WD
Sbjct: 247 EGSYLLS-NAMDNTVRVWD 264
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 154 (59.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 52/193 (26%), Positives = 95/193 (49%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
++ + S D VK+WD+ K + +T +V AV +N S QI+ SG D + + D R
Sbjct: 167 LVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLR 224
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ + A V L+ +E S+++S D T++ +D+R + + +
Sbjct: 225 QNKLTYTMRGHADSVTGLSLS--SEGSYLLSNAMDNTVRVWDVRPF-APKERCVRIFQGN 281
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP-KAGAVFSVAFS 314
+H +K + S++P + +A GS D+ V +WD ++ + I + P AG++ VAF
Sbjct: 282 VHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRR---ILYKLPGHAGSINEVAFH 337
Query: 315 EDSPFVLAIGGSK 327
D P +L+ K
Sbjct: 338 PDEPIILSASSDK 350
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ +V+ L +N + ++L SAS DK V +WD G+ L+ HT V + PQ+
Sbjct: 109 HSGAVMELHYNTD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ +GS D +V + D R + V ++ ++ ++ + D IK +D+R
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQ-TFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQ 225
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS--CI 298
K ++T+ H +V +S + LL+ + D V++WD+ P C+
Sbjct: 226 NKL---------TYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCV 275
Query: 299 ----ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
+ + + ++S D + A G + + +WDT S
Sbjct: 276 RIFQGNVHNFEKNLLRCSWSPDGSKIAA-GSADRFVYVWDTTS 317
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 138 LASASADKQVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
LASA D+ + +W+V G C+ TL+ H+ V + +N +L S S D++V + D+
Sbjct: 82 LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDG-SMLFSASTDKTVAVWDS 139
Query: 196 RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ V S +DGT+K +DIR K T Q +
Sbjct: 140 ETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTY-- 195
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 315
V +++N +++ G D +K+WDL N+ + + A +V ++ S
Sbjct: 196 ------QVLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNKLTY--TMRGHADSVTGLSLSS 246
Query: 316 DSPFVLAIGGSKGKLEIWD 334
+ ++L+ + +WD
Sbjct: 247 EGSYLLS-NAMDNTVRVWD 264
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 154 (59.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 52/193 (26%), Positives = 95/193 (49%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
++ + S D VK+WD+ K + +T +V AV +N S QI+ SG D + + D R
Sbjct: 167 LVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLR 224
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ + A V L+ +E S+++S D T++ +D+R + + +
Sbjct: 225 QNKLTYTMRGHADSVTGLSLS--SEGSYLLSNAMDNTVRVWDVRPF-APKERCVKIFQGN 281
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP-KAGAVFSVAFS 314
+H +K + S++P + +A GS D+ V +WD ++ + I + P AG++ VAF
Sbjct: 282 VHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRR---ILYKLPGHAGSINEVAFH 337
Query: 315 EDSPFVLAIGGSK 327
D P +L+ K
Sbjct: 338 PDEPIILSASSDK 350
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ +V+ L +N + ++L SAS DK V +WD G+ L+ HT V + PQ+
Sbjct: 109 HSGAVMELHYNTD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ +GS D +V + D R + V ++ ++ ++ + D IK +D+R
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQ-TFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQ 225
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS--CI 298
K ++T+ H +V +S + LL+ + D V++WD+ P C+
Sbjct: 226 NKL---------TYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCV 275
Query: 299 ----ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
+ + + ++S D + A G + + +WDT S
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAA-GSADRFVYVWDTTS 317
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 138 LASASADKQVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
LASA D+ + +W+V G C+ TL+ H+ V + +N +L S S D++V + D+
Sbjct: 82 LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDG-SMLFSASTDKTVAVWDS 139
Query: 196 RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ V S +DGT+K +DIR K T Q +
Sbjct: 140 ETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTY-- 195
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 315
V +++N +++ G D +K+WDL N+ + + A +V ++ S
Sbjct: 196 ------QVLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNKLTY--TMRGHADSVTGLSLSS 246
Query: 316 DSPFVLAIGGSKGKLEIWD 334
+ ++L+ + +WD
Sbjct: 247 EGSYLLS-NAMDNTVRVWD 264
>UNIPROTKB|F1MRW5 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005680 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 EMBL:DAAA02009047 IPI:IPI00715664
UniGene:Bt.639 ProteinModelPortal:F1MRW5 Ensembl:ENSBTAT00000012945
Uniprot:F1MRW5
Length = 499
Score = 156 (60.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 54/215 (25%), Positives = 99/215 (46%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D + +AW KE N LA ++ +V++WDV K + H+ +V ++ WN + IL
Sbjct: 227 DYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLCWNSY---ILS 282
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS + D R++ H + + +V L W P H L G +
Sbjct: 283 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH-----LASGGNDNL-VNVW 336
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIA 299
S P T H AV +++ P N+LATG ++D+ +++W++ + +C++
Sbjct: 337 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--ACLS 394
Query: 300 SRNPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIW 333
+ + + V S+ +S + G ++ +L IW
Sbjct: 395 AVDAHS-QVCSILWSPHYKELISGHGFAQNQLVIW 428
>UNIPROTKB|Q5ZI36 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005680 "anaphase-promoting complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005680 GO:GO:0031145
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
GeneTree:ENSGT00580000081599 OMA:AVALDNC EMBL:AADN02012741
EMBL:AADN02012739 EMBL:AJ720948 IPI:IPI00601740
RefSeq:NP_001006536.1 UniGene:Gga.9187 STRING:Q5ZI36
Ensembl:ENSGALT00000016208 GeneID:424563 KEGG:gga:424563
InParanoid:Q5ZI36 NextBio:20826883 Uniprot:Q5ZI36
Length = 507
Score = 156 (60.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 52/215 (24%), Positives = 100/215 (46%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
D V ++W KE N LA + + +V++WDV K ++ H+ +V +++WN + IL
Sbjct: 234 DYVSSVSWIKE-GNYLAVGTRNAEVQLWDVQQQKRLRSMTSHSSRVGSLSWNSY---ILS 289
Query: 183 SGSFDRSVVMKDARISTHS-GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS + D R++ H +V L W + D + + +
Sbjct: 290 SGSRTGHIHHHDVRVAEHHVATLTGHTQEVCGLKWSLDGRY-LASGGNDNLVNIWP--SV 346
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDL-SNNQPSCI 298
+ D + +FT H AV +++ P N+LATG ++D+ +++W++ S S +
Sbjct: 347 QGDSGDFTPVQTFT--QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGTCLSAV 404
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+ + ++S + E F+ G ++ +L IW
Sbjct: 405 DAHSQVCSILWSTTYKE---FISGHGFAQNQLVIW 436
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 55/206 (26%), Positives = 96/206 (46%)
Query: 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSV-VMKD 194
+ + SAS D +K WD++ G C T H D V+ + ++ + S S D++V V
Sbjct: 204 DFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGT-LFASASLDQTVTVWSF 262
Query: 195 ARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGT-----IKGFDIRTAKSDPDST 248
A S + A VE + W P ++ V + +G G R+ K+ +T
Sbjct: 263 ATKSAKLVLRDHEHA-VECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINT 321
Query: 249 SQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAV 308
FTL AH+ V ++++P L++ DK +++W+LS + C+ + V
Sbjct: 322 GDVL-FTLLAHENWVRGLAFHPKGKYLISVAD-DKTLRVWELSAQR--CMKAIEAHEHFV 377
Query: 309 FSVAFSEDSPFVLAIGGSKGKLEIWD 334
+VAF + SPFV+ G ++W+
Sbjct: 378 STVAFHQTSPFVIT-GSVDMSCKVWE 402
Score = 123 (48.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 53/191 (27%), Positives = 83/191 (43%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
I+AS S D +K+WD G+ TL+ HTD V +A + Q L+S S D S+ + D
Sbjct: 120 IMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQ-LVSCSSDLSIKLWDFG 178
Query: 197 ISTHSGFKWAVAAD--VESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSS 253
T+ K + V S+ + P + FV+S D TIK +DI T
Sbjct: 179 -QTYDCLKSLKGHEHTVSSVTFLPTGD--FVLSASRDHTIKQWDISTG---------YCV 226
Query: 254 FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF 313
+T H+ V I + L A+ S D+ V +W + + + A V V +
Sbjct: 227 YTFRGHNDWVRMIRISN-DGTLFASASLDQTVTVWSFATKSAKLVLRDHEHA--VECVEW 283
Query: 314 SEDSPFVLAIG 324
+ D+ + G
Sbjct: 284 APDTAYTNVTG 294
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 58/217 (26%), Positives = 92/217 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HTD + G ++ LA++S D +K+WD+ G+C LTLE H V + W H
Sbjct: 401 HTDWLSGCCFHPSGSK-LATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTW-HSCGDF 458
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ S S D + + D + V S+ + P + S D T+ +D RT
Sbjct: 459 VASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASA-DKTLSVWDART 517
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
K + QS L+ H +V ++ P +++A+ + KLWD P
Sbjct: 518 GKCE------QS---LYGHMHSVNDATFTPR-GHIIASCDARGVTKLWDFRKLIPIVSID 567
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
P +G V F + S VLA + G + + D S
Sbjct: 568 VGPSSGN--EVNFDQ-SGRVLAQASANGIIHLLDLKS 601
Score = 126 (49.4 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 52/198 (26%), Positives = 85/198 (42%)
Query: 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
+ +ASAS D KIWDV + +C TL HTD V ++ + S ILL+ S D+++ + DA
Sbjct: 457 DFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS-NILLTASADKTLSVWDA 515
Query: 196 RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
R + V + P H G K +D R K P +
Sbjct: 516 RTGKCEQSLYGHMHSVNDATFTPRG-HIIASCDARGVTKLWDFR--KLIP-------IVS 565
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 315
+ + ++++ +LA S + ++ L DL + Q + + V SV FS
Sbjct: 566 IDVGPSSGNEVNFDQS-GRVLAQASANGIIHLLDLKSGQIHKLVGHESE---VHSVVFSH 621
Query: 316 DSPFVLAIGGSKGKLEIW 333
+ + GGS G + +W
Sbjct: 622 LGENLYS-GGSDGTIRLW 638
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 55/205 (26%), Positives = 87/205 (42%)
Query: 135 RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 194
R+ L S S D+ K+ + G LT HTD + + H S L + S D ++ + D
Sbjct: 372 RDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCF-HPSGSKLATSSGDSTIKLWD 430
Query: 195 ARIS----THSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTS 249
T G AV S W H+ FV S D T K +D+ S
Sbjct: 431 LNKGECTLTLEGHNHAVW----SCTW--HSCGDFVASASLDMTSKIWDVN---------S 475
Query: 250 QQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF 309
++ +TL+ H +V +I + P N+L T S DK + +WD + C S +V
Sbjct: 476 ERCRYTLYGHTDSVNSIEFFPF-SNILLTASADKTLSVWDARTGK--CEQSLYGHMHSVN 532
Query: 310 SVAFSEDSPFVLAIGGSKGKLEIWD 334
F+ ++A ++G ++WD
Sbjct: 533 DATFTPRG-HIIASCDARGVTKLWD 556
Score = 44 (20.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 65 GNFMAVGSMEPAIEIWDLD 83
G+F+A S++ +IWD++
Sbjct: 456 GDFVASASLDMTSKIWDVN 474
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 65 GNFMAVGSMEPAIEIWDLD 83
G+ +A S + I++WDL+
Sbjct: 414 GSKLATSSGDSTIKLWDLN 432
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 155 (59.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 52/197 (26%), Positives = 87/197 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN-LTLEHHTDKVQAVAWNHHSPQ 179
HT SV L W+ N+ AS S D V +WD+ GK L+ + H V ++WN +
Sbjct: 268 HTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLASC 327
Query: 180 ILLSGSFDRSVVMKDARI-----STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
+L SGS D + ++D R+ + + F++ + S+ W H + V+ D +
Sbjct: 328 MLASGSDDGTFSIRDLRLIKGGDAVVAHFEYH-KHPITSIEWSAHEASTLAVTSGDNQLT 386
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
+D+ K + +++ F +A K + + L P LL K +K N
Sbjct: 387 IWDLSLEKDE----EEEAEF--NAQTKELVNTPQD-LPPQLLFVHQGQKDLKELHWHNQI 439
Query: 295 PSCIASRNPKAGAVFSV 311
P I S AG F++
Sbjct: 440 PGMIIST---AGDGFNI 453
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 47/176 (26%), Positives = 74/176 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN---LTLEHHTDKVQAVAWNHHS 177
H D + W+ L S + +W+ A+G + HT V+ + W+
Sbjct: 222 HKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAE 281
Query: 178 PQILLSGSFDRSVVMKDARI--STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235
+ S S D SV + D R+ S FK A ADV ++W+ A +DGT
Sbjct: 282 ENVFASCSVDGSVAVWDIRLGKSPALSFK-AHNADVNVISWNRLASCMLASGSDDGTFSI 340
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291
D+R K D+ + F H H + +I ++ + LA S D + +WDLS
Sbjct: 341 RDLRLIKGG-DAVV--AHFEYHKHP--ITSIEWSAHEASTLAVTSGDNQLTIWDLS 391
Score = 136 (52.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 52/181 (28%), Positives = 77/181 (42%)
Query: 164 HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV--------AADVESLA 215
H D+ A+ W+ + LLSG + + + SG WAV A VE L
Sbjct: 222 HKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPA----SG-SWAVDPIPFAGHTASVEDLQ 276
Query: 216 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 275
W P E+ F DG++ +DIR KS P + + AH+ V IS+N L +
Sbjct: 277 WSPAEENVFASCSVDGSVAVWDIRLGKS-P-------ALSFKAHNADVNVISWNRLASCM 328
Query: 276 LATGSTDKMVKLWDLS--NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
LA+GS D + DL + +A + S+ +S LA+ +L IW
Sbjct: 329 LASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIW 388
Query: 334 D 334
D
Sbjct: 389 D 389
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 56/201 (27%), Positives = 93/201 (46%)
Query: 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
N+ + DK V ++D + T + H K+ AV H +S S D + + A
Sbjct: 222 NLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVL-HPDNITAISASADSHIRVWSA 280
Query: 196 RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF-DIRTAKSDPDSTSQQSSF 254
S+ A V ++ + A +++S D + F DIR+ KS + + S
Sbjct: 281 TDSSSKAIIDVHQAPVTDISLN--ASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGS- 337
Query: 255 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP-KAGAVFSVAF 313
AV +I ++P + TG+ D +VK+WDL N +A+ P AV S+AF
Sbjct: 338 -----QIAVHSIEFHP-DGLIFGTGAADAVVKIWDLKNQT---VAAAFPGHTAAVRSIAF 388
Query: 314 SEDSPFVLAIGGSKGKLEIWD 334
SE+ + LA G G++++WD
Sbjct: 389 SENG-YYLATGSEDGEVKLWD 408
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 59/194 (30%), Positives = 79/194 (40%)
Query: 136 NILA-SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 194
NI A SASAD +++W ++ H V ++ N S +LS S D D
Sbjct: 263 NITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNA-SGDYILSASDDSYWAFSD 321
Query: 195 ARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDP-DSTSQQSS 253
R SG K VE A HS DG I G A D +Q +
Sbjct: 322 IR----SG-KSLCKVSVEP--GSQIAVHSIEFH-PDGLIFGTGAADAVVKIWDLKNQTVA 373
Query: 254 FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF 313
H AV +I+++ LATGS D VKLWDL + + N + + S++F
Sbjct: 374 AAFPGHTAAVRSIAFSEN-GYYLATGSEDGEVKLWDLRKLK-NLKTFANEEKQPINSLSF 431
Query: 314 SEDSPFVLAIGGSK 327
F L IGG K
Sbjct: 432 DMTGTF-LGIGGQK 444
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 149 (57.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 47/167 (28%), Positives = 76/167 (45%)
Query: 139 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 198
AS AD+ +KIWD+A+G+ L+L H V+AV + P L SG D+ V D +
Sbjct: 200 ASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHP-FLFSGGEDKQVKCWDLEYN 258
Query: 199 THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA 258
+ V++L+ P + V D T + +D+RT +Q F
Sbjct: 259 KVIRHYHGHLSAVQALSVHPSLD-VLVTCARDSTARVWDMRTK-------AQVHCFA--G 308
Query: 259 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA 305
H V + + P ++ T S D V+LWDL+ + C + + K+
Sbjct: 309 HTNTVADVVCQSVDPQVI-TASHDATVRLWDLAAGRSMCTLTHHKKS 354
Score = 109 (43.4 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD--- 194
L S DKQVK WD+ K H VQA++ H S +L++ + D + + D
Sbjct: 241 LFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSV-HPSLDVLVTCARDSTARVWDMRT 299
Query: 195 -ARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS 253
A++ +G VA DV + DP + + D T++ +D+ +S
Sbjct: 300 KAQVHCFAGHTNTVA-DVVCQSVDPQV----ITASHDATVRLWDLAAGRS---------M 345
Query: 254 FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
TL H K+V ++ +P + N+ A+ S D +K W L +
Sbjct: 346 CTLTHHKKSVRALTIHPRL-NMFASASPDN-IKQWKLPKGE 384
Score = 47 (21.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 61 DREKGN-FMAVGSMEPAIEIWDL 82
D E GN + A G + I+IWDL
Sbjct: 191 DVEPGNQWFASGGADRIIKIWDL 213
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 157 (60.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 128 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD 187
++W+ +N+LAS+ + V +WD G+ + + H + +V +N P++L SGS D
Sbjct: 439 ISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDD 498
Query: 188 RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS 247
V + + +S A+V + + P + + D + +D+R AK
Sbjct: 499 AKVKLWSTNLD-NSVASIEAKANVCCVKFSPTSRYHLAFGCADHCVHYYDLRNAK----- 552
Query: 248 TSQQSSFTLHAHDKAVCTISYNPLVPN-LLATGSTDKMVKLWDLSNNQPSCIASRNPKAG 306
Q H KAV SY V + + STD +KLW++ N+P C+ S
Sbjct: 553 ---QPIMVFKGHRKAV---SYAKFVNGGEIVSASTDSQLKLWNV--NKPHCLRSFKGHIN 604
Query: 307 AVFSVAFSEDSPFVLAIGGSKGKLEIW 333
V + + +V A G L ++
Sbjct: 605 EKNFVGLASNGDYV-ACGSENNSLYLY 630
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKV-QAVAWNHHSPQ 179
H +++ + W+ + SAS D +++WDV +G TL + KV ++++ +
Sbjct: 256 HKEAISSVLWSDAEE--ICSASWDHTIRVWDVESGSLKSTLTGN--KVFNCISYSPLCKR 311
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKGF 236
L SGS DR + + D R S ++ + V SL W P E + D +K +
Sbjct: 312 -LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLW 370
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 282
D R+ K+ P + L AH+ V ++ + LL +G D
Sbjct: 371 DTRSCKA-P-------LYDLAAHEDKVLSVDWTDT--GLLLSGGAD 406
Score = 111 (44.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 46/142 (32%), Positives = 68/142 (47%)
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL 256
I T SG K A++ S+ W AE S D TI+ +D+ +S S +S+ T
Sbjct: 250 IVTLSGHKEAIS----SVLWSD-AEEICSASW-DHTIRVWDV-------ESGSLKSTLT- 295
Query: 257 HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA-SRNPKAGAVFSVAFSE 315
+K ISY+PL L A+GSTD+ ++LWD S ++ S G V S+ +S
Sbjct: 296 --GNKVFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSP 352
Query: 316 DSPFVLAIGGSKGKLEIWDTLS 337
L G +++WDT S
Sbjct: 353 THEQQLISGSLDNIVKLWDTRS 374
Score = 87 (35.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAW--NHHSP 178
H D + + +E+ + + S DK +IW + GK +T+ HTD V+ VAW +
Sbjct: 100 HDDWISSVRGAEEW---ILTGSYDKTSRIWSLE-GKSIMTIVGHTDVVKDVAWVKKDNLS 155
Query: 179 QILLSGSFDRSVVM 192
+LLS S D+++++
Sbjct: 156 CLLLSSSMDQTILL 169
Score = 65 (27.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 121 HTDSVLGLAWNKE--FRNILASASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWN 174
HTD V +AW K+ +L S+S D+ + +W+ + + H H V ++A +
Sbjct: 139 HTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVD 198
Query: 175 HHSPQILLSGSFDR 188
+ SGS+D+
Sbjct: 199 STGTKFC-SGSWDK 211
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 143 (55.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H +V L K +LA+ D +V +W + C ++L HT V++V N +P+
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN--TPEE 80
Query: 180 ILLSGSFDRSVVMKD---ARI-STHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIK 234
++++GS S+ + D A+I T G K A++ SL + P+ E FV S +D IK
Sbjct: 81 LIVAGSQSGSIRVWDLEAAKILRTLMGHK----ANICSLDFHPYGE--FVASGSQDTNIK 134
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291
+DIR + F H +AV + ++P LA+ + D VKLWDL+
Sbjct: 135 LWDIRR---------KGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLT 181
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 54/183 (29%), Positives = 89/183 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSP 178
HT ++ +AW+ N LAS S D + IW G +C TLE H ++V+ V W+ S
Sbjct: 44 HTRTIRSVAWSP-CGNYLASCSFDATICIWSKKDGDFECMATLEGHENEVKCVNWSS-SG 101
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAV-----AADVESLAWDPHAEHSFVVSLEDGTI 233
L S S D+S + + I ++ A + DV+ + W P E++ V + D TI
Sbjct: 102 VYLASCSRDKSAWIWEF-IEEDEEYECASVLTDHSQDVKHVVWSPK-ENALVSASYDNTI 159
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293
K + + D D + S TL H+ V ++S++ ++ G DK++K+W +
Sbjct: 160 KIYK----EVDDD---WECSHTLIGHESTVWSLSFHSSGELFVSCGD-DKVLKIWKCLKS 211
Query: 294 QPS 296
PS
Sbjct: 212 GPS 214
Score = 134 (52.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 49/185 (26%), Positives = 84/185 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSP 178
H+ V + W+ + N L SAS D +KI+ +C+ TL H V ++++ H S
Sbjct: 134 HSQDVKHVVWSPK-ENALVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSF-HSSG 191
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKW----AVAA----DVESLAWDPHAEHSFVVSLED 230
++ +S D+ + + S S KW +A + + W + + D
Sbjct: 192 ELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSK-LNNKIATACGD 250
Query: 231 GTIKGFDI-RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
I+ F I R S + + + H HD V + ++P V N+LA+GS D +K+W
Sbjct: 251 DAIRIFSIVRITISISNQLLFIAYYQAHNHD--VNVVRWHPKVDNILASGSDDNCIKIWK 308
Query: 290 L-SNN 293
+ SNN
Sbjct: 309 VHSNN 313
Score = 37 (18.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 52 MAWLDCPLKDREKGNFMAVGSMEPAIEIW 80
+AW C GN++A S + I IW
Sbjct: 51 VAWSPC-------GNYLASCSFDATICIW 72
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 47/135 (34%), Positives = 65/135 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA--GK-CNLTLEH-HTDKVQAVAWNHH 176
HT SV L W+ + AS SAD ++IWD+ A GK C LT H V ++W+
Sbjct: 260 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRR 319
Query: 177 SPQILLSGSFDRSVVMKDARI----STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 232
P LLSG D ++ + D R S + FK +A V S+ W P F S D
Sbjct: 320 EP-FLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAP-VTSVEWHPQDSGVFAASGADNQ 377
Query: 233 IKGFDIRTAKSDPDS 247
I +D+ + DP+S
Sbjct: 378 ITQWDLAVER-DPES 391
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 51/180 (28%), Positives = 75/180 (41%)
Query: 164 HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV--------AADVESLA 215
H + A+ W+ P LL+G ++V + T G W V VE L
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNVHLWTP---TEGG-SWNVDQRPFVGHTRSVEDLQ 268
Query: 216 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 275
W P + F D +I+ +DIR A P ++ T AHD V IS++ P L
Sbjct: 269 WSPTEDTVFASCSADASIRIWDIRAA---PGKACMLTTAT--AHDGDVNVISWSRREPFL 323
Query: 276 LATGSTDKMVKLWDLSN-NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
L+ G D +K+WDL S +A+ V SV + V A G+ ++ WD
Sbjct: 324 LS-GGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWD 382
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 43/181 (23%), Positives = 71/181 (39%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWD-VAAGKCNLTLEH---HTDKVQAVAWNHH 176
H L W+ L + K V +W G N+ HT V+ + W+
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPT 272
Query: 177 SPQILLSGSFDRSVVMKDARISTHSGFKWAVAA----DVESLAWDPHAEHSFVVSL-EDG 231
+ S S D S+ + D R + A DV ++W F++S +DG
Sbjct: 273 EDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWS--RREPFLLSGGDDG 330
Query: 232 TIKGFDIRTAKS-DPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
+K +D+R KS P +T +Q H V ++ ++P + A D + WDL
Sbjct: 331 ALKVWDLRQFKSGSPVATFKQ-------HMAPVTSVEWHPQDSGVFAASGADNQITQWDL 383
Query: 291 S 291
+
Sbjct: 384 A 384
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 46/135 (34%), Positives = 63/135 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK---CNLTLEH-HTDKVQAVAWNHH 176
HT SV L W+ + AS SAD ++IWD+ A C LT H V + W+H
Sbjct: 260 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHR 319
Query: 177 SPQILLSGSFDRSVVMKDARI----STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 232
P LLSG D ++ + D R S + FK VA V S+ W P F S D
Sbjct: 320 EP-FLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP-VTSVEWHPQDSGVFAASGADNQ 377
Query: 233 IKGFDIRTAKSDPDS 247
I +D+ + DP++
Sbjct: 378 ITQWDLAVER-DPEA 391
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 49/177 (27%), Positives = 76/177 (42%)
Query: 164 HTDKVQAVAWNHHSPQILLSGSFDRSVVM---KDARISTHSGFKWAVA--ADVESLAWDP 218
H + A+ W+ P LL+G +++ + D S H + V VE L W P
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGG-SWHVDQRPFVGHTRSVEDLQWSP 271
Query: 219 HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLAT 278
+ F D +I+ +DIR A P ++ T AHD V I+++ P LL+
Sbjct: 272 TEDTVFASCSADASIRIWDIRAA---PSKACMLTTAT--AHDGDVNVINWSHREPFLLS- 325
Query: 279 GSTDKMVKLWDLSN-NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
G D +K+WDL S +A+ V SV + V A G+ ++ WD
Sbjct: 326 GGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWD 382
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 150 (57.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 57/207 (27%), Positives = 103/207 (49%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
+LA+ + DK ++IWD++ + L H + ++ + + L+SGS DRSV + D R
Sbjct: 269 LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR-LVSGSGDRSVRIWDLR 327
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA--KSDPDSTSQQSSF 254
S S ++ V ++A P + SL D T++ +D T DS ++ +
Sbjct: 328 TSQCS-LTLSIEDGVTTVAVSPDGKLIAAGSL-DRTVRVWDSTTGFLVERLDSGNENGN- 384
Query: 255 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL---SNNQPSCIASRNPKAGAVFSV 311
H+ +V +++++ + A+GS D+ VKLW L S+ + +C + V SV
Sbjct: 385 ---GHEDSVYSVAFSNNGEQI-ASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSV 440
Query: 312 AFSEDSPFVLAIGGSKGKLEI-WDTLS 337
+ D+ ++L+ GSK + I WD S
Sbjct: 441 CCTPDNEYILS--GSKDRGVIFWDQAS 465
Score = 142 (55.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 61/206 (29%), Positives = 95/206 (46%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
L S S D+ V+IWD+ +C+LTL D V VA + +++ +GS DR+V + D+
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDG-KLIAAGSLDRTVRVWDSTT 369
Query: 198 S-----THSGFKWAVAAD--VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQ 250
SG + + V S+A+ + E SL D T+K + + KSD ST +
Sbjct: 370 GFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSL-DRTVKLWHLE-GKSDKKSTCE 427
Query: 251 QSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFS 310
T H V ++ P +L+ GS D+ V WD ++ P + + +V S
Sbjct: 428 ---VTYIGHKDFVLSVCCTPDNEYILS-GSKDRGVIFWDQASGNPLLMLQGH--RNSVIS 481
Query: 311 VAFSEDSPF---VLAIGGSKGKLEIW 333
VA S +S + A G K IW
Sbjct: 482 VAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 46 (21.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 65 GNFMAVGSMEPAIEIWDL 82
G +A G+ + I IWDL
Sbjct: 267 GKLLATGAEDKLIRIWDL 284
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 65 GNFMAVGSMEPAIEIWDL 82
G+ + GS + ++ IWDL
Sbjct: 309 GDRLVSGSGDRSVRIWDL 326
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 150 (57.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 57/207 (27%), Positives = 103/207 (49%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
+LA+ + DK ++IWD++ + L H + ++ + + L+SGS DRSV + D R
Sbjct: 269 LLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR-LVSGSGDRSVRIWDLR 327
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA--KSDPDSTSQQSSF 254
S S ++ V ++A P + SL D T++ +D T DS ++ +
Sbjct: 328 TSQCS-LTLSIEDGVTTVAVSPDGKLIAAGSL-DRTVRVWDSTTGFLVERLDSGNENGN- 384
Query: 255 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL---SNNQPSCIASRNPKAGAVFSV 311
H+ +V +++++ + A+GS D+ VKLW L S+ + +C + V SV
Sbjct: 385 ---GHEDSVYSVAFSNNGEQI-ASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSV 440
Query: 312 AFSEDSPFVLAIGGSKGKLEI-WDTLS 337
+ D+ ++L+ GSK + I WD S
Sbjct: 441 CCTPDNEYILS--GSKDRGVIFWDQAS 465
Score = 142 (55.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 61/206 (29%), Positives = 95/206 (46%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
L S S D+ V+IWD+ +C+LTL D V VA + +++ +GS DR+V + D+
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDG-KLIAAGSLDRTVRVWDSTT 369
Query: 198 S-----THSGFKWAVAAD--VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQ 250
SG + + V S+A+ + E SL D T+K + + KSD ST +
Sbjct: 370 GFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSL-DRTVKLWHLE-GKSDKKSTCE 427
Query: 251 QSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFS 310
T H V ++ P +L+ GS D+ V WD ++ P + + +V S
Sbjct: 428 ---VTYIGHKDFVLSVCCTPDNEYILS-GSKDRGVIFWDQASGNPLLMLQGH--RNSVIS 481
Query: 311 VAFSEDSPF---VLAIGGSKGKLEIW 333
VA S +S + A G K IW
Sbjct: 482 VAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 46 (21.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 65 GNFMAVGSMEPAIEIWDL 82
G +A G+ + I IWDL
Sbjct: 267 GKLLATGAEDKLIRIWDL 284
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 65 GNFMAVGSMEPAIEIWDL 82
G+ + GS + ++ IWDL
Sbjct: 309 GDRLVSGSGDRSVRIWDL 326
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 152 (58.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 51/193 (26%), Positives = 95/193 (49%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
++ + S D VK+WD+ K + +T +V AV +N S QI+ SG D + + D R
Sbjct: 166 LVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLR 223
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ + A V L+ +E S+++S D T++ +D+R + + +
Sbjct: 224 QNKLTYTMRGHADSVTGLSLS--SEGSYLLSNAMDNTVRVWDVRPF-APKERCVKIFQGN 280
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP-KAGAVFSVAFS 314
+H +K + S++P + +A GS D+ V +WD ++ + I + P AG++ VAF
Sbjct: 281 VHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRR---ILYKLPGHAGSINEVAFH 336
Query: 315 EDSPFVLAIGGSK 327
D P +++ K
Sbjct: 337 PDEPIIISASSDK 349
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ +V+ L +N + ++L SAS DK V +WD G+ L+ HT V + PQ+
Sbjct: 108 HSGAVMELHYNTD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 166
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ +GS D +V + D R + V ++ ++ ++ + D IK +D+R
Sbjct: 167 VCTGSDDGTVKLWDIRKKAAIQ-TFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQ 224
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS--CI 298
K ++T+ H +V +S + LL+ + D V++WD+ P C+
Sbjct: 225 NKL---------TYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCV 274
Query: 299 ----ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
+ + + ++S D + A G + + +WDT S
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAA-GSADRFVYVWDTTS 316
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 138 LASASADKQVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
LASA D+ + +W+V G C+ TL+ H+ V + +N +L S S D++V + D+
Sbjct: 81 LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDG-SMLFSASTDKTVAVWDS 138
Query: 196 RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ V S +DGT+K +DIR K T Q +
Sbjct: 139 ETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTY-- 194
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 315
V +++N +++ G D +K+WDL N+ + + A +V ++ S
Sbjct: 195 ------QVLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNKLTY--TMRGHADSVTGLSLSS 245
Query: 316 DSPFVLAIGGSKGKLEIWD 334
+ ++L+ + +WD
Sbjct: 246 EGSYLLS-NAMDNTVRVWD 263
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 152 (58.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 51/193 (26%), Positives = 95/193 (49%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196
++ + S D VK+WD+ T ++ T +V AV +N S QI+ SG D + + D R
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAVQTFQN-TYQVLAVTFNDTSDQII-SGGIDNDIKVWDLR 224
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ + A V L+ +E S+++S D T++ +D+R + + +
Sbjct: 225 QNKLTYTMRGHADSVTGLSLS--SEGSYLLSNAMDNTVRVWDVRPF-APKERCVKIFQGN 281
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP-KAGAVFSVAFS 314
+H +K + S++P + +A GS D+ V +WD ++ + + + P AG++ VAF
Sbjct: 282 VHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRR---VLYKLPGHAGSINEVAFH 337
Query: 315 EDSPFVLAIGGSK 327
D P +L+ K
Sbjct: 338 PDEPIILSASSDK 350
Score = 122 (48.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+ +V+ L +N + ++L SAS DK V +WD G+ L+ HT V + PQ+
Sbjct: 109 HSGAVMELHYNTD-GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ +GS D +V + D R + + V ++ ++ ++ + D IK +D+R
Sbjct: 168 VCTGSDDGTVKLWDIRKKA-AVQTFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQ 225
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS--CI 298
K ++T+ H +V +S + LL+ + D V++WD+ P C+
Sbjct: 226 NKL---------TYTMRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCV 275
Query: 299 ----ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337
+ + + ++S D + A G + + +WDT S
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAA-GSADRFVYVWDTTS 317
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 138 LASASADKQVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
LASA D+ + +W+V G C+ TL+ H+ V + +N +L S S D++V + D+
Sbjct: 82 LASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTDG-SMLFSASTDKTVAVWDS 139
Query: 196 RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ V S +DGT+K +DIR K T Q +
Sbjct: 140 ETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR--KKAAVQTFQNTY-- 195
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 315
V +++N +++ G D +K+WDL N+ + + A +V ++ S
Sbjct: 196 ------QVLAVTFNDTSDQIIS-GGIDNDIKVWDLRQNKLTY--TMRGHADSVTGLSLSS 246
Query: 316 DSPFVLAIGGSKGKLEIWD 334
+ ++L+ + +WD
Sbjct: 247 EGSYLLS-NAMDNTVRVWD 264
>DICTYBASE|DDB_G0284621 [details] [associations]
symbol:pwp2 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0284621 GO:GO:0005829 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 HSSP:P16649
EMBL:AAFI02000070 KO:K14558 InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:XP_638435.1
ProteinModelPortal:Q54PE0 STRING:Q54PE0 EnsemblProtists:DDB0235358
GeneID:8624685 KEGG:ddi:DDB_G0284621 OMA:HEAPIAC
ProtClustDB:CLSZ2430232 Uniprot:Q54PE0
Length = 922
Score = 158 (60.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 55/218 (25%), Positives = 99/218 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H+ ++ +A++ + + I A+ D +VKIW+ +G C +T H V AV ++ S Q
Sbjct: 357 HSYNMNTVAYSPDGQTI-ATGGEDGKVKIWNTTSGYCYITFTEHEGPVTAVKYSPVSSQN 415
Query: 180 ILLSGSFDRSVVMKD-ARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
++ S D ++ D R F LA DP E SL+ I + +
Sbjct: 416 VVFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAVDPSGEIIAAGSLDSFEIYVWSV 475
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298
RT + L H VC ++++P+ P LA+ S DK K+W++ ++ I
Sbjct: 476 RTGRLTD---------ILSGHQSPVCELAFDPINP-FLASASWDKSCKIWNIFEDRE--I 523
Query: 299 ASRNPKAGAVFSVAFSEDSP-FVLAIGGSKGKLEIWDT 335
V + A+S+D F+++ G ++I++T
Sbjct: 524 RESIQHTSDVLTCAYSQDGKKFIVSC--LDGTIQIYET 559
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 149 (57.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 53/175 (30%), Positives = 85/175 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHHSP 178
H ++ + W+ LASAS D IW ++G+ CN TLE H ++V++V+W+ S
Sbjct: 58 HKRTIREIRWSP-CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSK-SG 115
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAVAA-----DVESLAWDPHAEHSFVVSLEDGTI 233
+L + S D+SV + + ++ F+ A DV+ + W P E S D TI
Sbjct: 116 GLLATCSRDKSVWIWE--VAGDDEFECAAVLNPHTQDVKRVVWHPTKEILASASY-DNTI 172
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
K F SD D T+ TL +H V +I ++ L++ S D +K+W
Sbjct: 173 KMFAESALDSDWDCTA-----TLSSHTSTVWSIDFDADGERLVSC-SDDTTLKIW 221
Score = 40 (19.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 64 KGNFMAVGSMEPAIEIWDL 82
KGN A + AI IW L
Sbjct: 25 KGNTFASCGEDKAIRIWSL 43
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 149 (57.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 60/215 (27%), Positives = 96/215 (44%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
L S S D+ V+IWD+ G+C+LTL D V VA + + + +GS DR+V + D+
Sbjct: 500 LVSGSGDRTVRIWDLRTGQCSLTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE- 557
Query: 198 STHSGFKWAVAADVESLAWDPHAEHSF-VVSLEDG----------TIKGFDIRTAKSDPD 246
+GF D E+ + H + + VV DG ++K ++++ A + D
Sbjct: 558 ---TGFL-VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 613
Query: 247 STSQQSS---FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP 303
S + S T H V +++ +L+ GS D+ V WD + P + +
Sbjct: 614 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS-GSKDRGVLFWDKKSGNPLLMLQGH- 671
Query: 304 KAGAVFSVAFSEDSPF-----VLAIGGSKGKLEIW 333
+V SVA + SP V A G K IW
Sbjct: 672 -RNSVISVAVANGSPLGPEYNVFATGSGDCKARIW 705
Score = 140 (54.3 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 52/205 (25%), Positives = 93/205 (45%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
LA+ + D+ ++IWD+ K + L+ H + ++ + S L+SGS DR+V + D R
Sbjct: 458 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY-FPSGDKLVSGSGDRTVRIWDLRT 516
Query: 198 STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH 257
S ++ V ++A P D ++ +D T S+ S T
Sbjct: 517 GQCS-LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT-- 573
Query: 258 AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIASRNPKAGAVFSVAFSED 316
H +V ++ + ++++ GS D+ VKLW+L N N S S+ P +G V +
Sbjct: 574 GHKDSVYSVVFTRDGQSVVS-GSLDRSVKLWNLQNANNKS--DSKTPNSGTC-EVTYIGH 629
Query: 317 SPFVLAIGGSKGKLEIWDTLSDAGI 341
FVL++ ++ I D G+
Sbjct: 630 KDFVLSVATTQNDEYILSGSKDRGV 654
Score = 51 (23.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 65 GNFMAVGSMEPAIEIWDLD 83
G F+A G+ + I IWD++
Sbjct: 455 GKFLATGAEDRLIRIWDIE 473
Score = 39 (18.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 65 GNFMAVGSMEPAIEIWDL 82
G+ + GS + + IWDL
Sbjct: 497 GDKLVSGSGDRTVRIWDL 514
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 51/233 (21%), Positives = 96/233 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL------EHHTDKVQAVAWN 174
H GLAW+ L S S D+++ +WDV+A + L E H ++ VAW+
Sbjct: 168 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWH 227
Query: 175 HHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234
+ I S D +V+ D R + ++ L+++P E + D T+
Sbjct: 228 MKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVA 287
Query: 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS--- 291
FD+R + P L H+ V + ++P +LA+ D+ + +WD++
Sbjct: 288 LFDLRKLTA-P-------LHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVG 339
Query: 292 -----------NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+ P + S + A+++D P+V++ L++W
Sbjct: 340 DEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVW 392
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/214 (25%), Positives = 97/214 (45%)
Query: 137 ILASASADKQVKIWDVA--AGK-----CN--LTLEHHTDKVQAVAWNHHSPQILLSGSFD 187
++ + ++ +V ++D A +GK C+ L L H + +AW+ LLSGS D
Sbjct: 132 LVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQD 191
Query: 188 RSVVMKDA------RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
+ + + D ++ + +E +AW E+ F + +D + +D+RT
Sbjct: 192 QRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRT- 250
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIAS 300
Q + H++ + +S+NP +LAT S+D V L+DL P + S
Sbjct: 251 --------NQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLS 302
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
++ G VF V + + VLA G +L +WD
Sbjct: 303 KHE--GEVFQVEWDPNHETVLASSGEDRRLMVWD 334
Score = 132 (51.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 40/183 (21%), Positives = 82/183 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +AW+ + NI SA D Q+ IWD+ + ++ H ++ +++N + +
Sbjct: 217 HQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWV 276
Query: 181 LLSGSFDRSVVMKDARIST---HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFD 237
L + S D +V + D R T H K +V + WDP+ E S ED + +D
Sbjct: 277 LATASSDSTVALFDLRKLTAPLHVLSKHE--GEVFQVEWDPNHETVLASSGEDRRLMVWD 334
Query: 238 IRTA-------KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
I + D + + F+ H + ++N P ++++ + D +++W +
Sbjct: 335 INRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 394
Query: 291 SNN 293
+ +
Sbjct: 395 AES 397
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 64 KGNFMAVGSMEPAIEIWDLDVI--DEV-QP-HVILG 95
K ++ GS + I +WD+ D+V P HV G
Sbjct: 181 KEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEG 216
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 156 (60.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 61/225 (27%), Positives = 93/225 (41%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + L WNK+ + L + S D+ +WDV A + E H+ V W ++
Sbjct: 364 HKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVS-- 420
Query: 181 LLSGSFDRSVVM-KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDI 238
+ S D + + K F +V + WDP S + S +D T K ++I
Sbjct: 421 FATSSTDSMIYLCKIGETRPAKTFT-GHQGEVNCVKWDPTG--SLLASCSDDSTAKIWNI 477
Query: 239 RTAKSDPDSTSQQSSFT--LHAHDKAVCTISYNPLVPNL--------LATGSTDKMVKLW 288
+ QS+F L H K + TI ++P P LA+ S D VKLW
Sbjct: 478 K-----------QSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLW 526
Query: 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
D + C S N V+S+AFS + ++ A G + IW
Sbjct: 527 DAELGKMLC--SFNGHREPVYSLAFSPNGEYI-ASGSLDKSIHIW 568
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/195 (25%), Positives = 87/195 (44%)
Query: 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSG 184
V L WN E +LA+ S D Q +IW + G+ TL H + ++ WN LL+G
Sbjct: 327 VTTLDWNGE-GTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKG-DYLLTG 383
Query: 185 SFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKS 243
S DR+ V+ D + F++ ++ + W + SF S D I + + ++
Sbjct: 384 SVDRTAVVWDVKAEEWKQQFEFHSGPTLD-VDWRNNV--SFATSSTDSMI--YLCKIGET 438
Query: 244 DPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP 303
P T FT H V + ++P +LLA+ S D K+W++ Q + +
Sbjct: 439 RPAKT-----FT--GHQGEVNCVKWDP-TGSLLASCSDDSTAKIWNIK--QSTFVHDLRE 488
Query: 304 KAGAVFSVAFSEDSP 318
++++ +S P
Sbjct: 489 HTKEIYTIRWSPTGP 503
Score = 41 (19.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 64 KGNFMAVGSMEPAIEIWDL--DVIDEVQPH 91
+G +A GS + IW L ++I + H
Sbjct: 335 EGTLLATGSCDGQARIWTLNGELISTLSKH 364
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 53/211 (25%), Positives = 97/211 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H ++L A+ + + + + D +IWD TL+ H + V V+W+ ++
Sbjct: 142 HGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG-EV 200
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDP-H-----AEHSFVVSLEDGTI 233
+ +GS D ++ + D + G + + SL+W+P H ++ S +DGTI
Sbjct: 201 IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTI 260
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293
K +D + S+ +T+ H +V + + LL +GS D+ V++WD+ N+
Sbjct: 261 KIWD---------TVSRVCQYTMSGHTNSVSCVKWGG--QGLLYSGSHDRTVRVWDI-NS 308
Query: 294 QPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324
Q CI A V ++ S D + L IG
Sbjct: 309 QGRCINILKSHAHWVNHLSLSTD--YALRIG 337
Score = 145 (56.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 54/186 (29%), Positives = 83/186 (44%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197
LAS+S D +KIWD + C T+ HT+ V V W +L SGS DR+V + D I
Sbjct: 251 LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG--LLYSGSHDRTVRVWD--I 306
Query: 198 STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH 257
++ + + W H S +L G FD T K P + + L
Sbjct: 307 NSQGRCINILKSHAH---WVNHLSLSTDYALRIGA---FD-HTGKK-PSTPEEAQKKALE 358
Query: 258 AHDKAVCTISYNPLVPNLLATGSTDKMVKLWD-LSNNQPSCIASRNPKAGAVFSVAFSED 316
++K +C + N ++ T S D + LW+ L + +P IA V VAFS D
Sbjct: 359 NYEK-ICKKNGNS--EEMMVTASDDYTMFLWNPLKSTKP--IARMTGHQKLVNHVAFSPD 413
Query: 317 SPFVLA 322
++++
Sbjct: 414 GRYIVS 419
Score = 125 (49.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 55/217 (25%), Positives = 98/217 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV-AAGKCNLTLEHHTDKVQAVAWNHHSPQ 179
HT+SV + W + +L S S D+ V++WD+ + G+C L+ H V ++ + +
Sbjct: 277 HTNSVSCVKWGGQ--GLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLS--TDY 332
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAW-DPHAEHSFVVSLEDGTIKGFDI 238
L G+FD + + ST + + E + + ++E V + +D T+ F
Sbjct: 333 ALRIGAFDHT----GKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTM--FLW 386
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298
KS T + T H K V ++++P + + S D +KLWD I
Sbjct: 387 NPLKS----TKPIARMT--GHQKLVNHVAFSP-DGRYIVSASFDNSIKLWD--GRDGKFI 437
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGK-LEIWD 334
++ +V+ VA+S D L + SK L++WD
Sbjct: 438 STFRGHVASVYQVAWSSDCR--LLVSCSKDTTLKVWD 472
Score = 116 (45.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 45/161 (27%), Positives = 78/161 (48%)
Query: 131 NKEFRNILASASADKQVKIWD-VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRS 189
N ++ +AS D + +W+ + + K + H V VA++ + ++S SFD S
Sbjct: 367 NGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDG-RYIVSASFDNS 425
Query: 190 VVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDS 247
+ + D R S F+ VA+ V +AW ++ +VS +D T+K +D+RT K D
Sbjct: 426 IKLWDGRDGKFISTFRGHVAS-VYQVAWS--SDCRLLVSCSKDTTLKVWDVRTRKLSVD- 481
Query: 248 TSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
L H V T+ ++ + + +G DKMV+LW
Sbjct: 482 --------LPGHKDEVYTVDWS-VDGKRVCSGGKDKMVRLW 513
Score = 112 (44.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H SV +AW+ + R +L S S D +K+WDV K ++ L H D+V V W+ ++
Sbjct: 443 HVASVYQVAWSSDCR-LLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRV 501
Query: 181 LLSGSFDRSV 190
SG D+ V
Sbjct: 502 C-SGGKDKMV 510
Score = 51 (23.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 50 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81
LC++W P G +A GSM+ I +WD
Sbjct: 190 LCVSW--SP-----DGEVIATGSMDNTIRLWD 214
>POMBASE|SPBC428.19c [details] [associations]
symbol:utp15 "U3 snoRNP protein Utp15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030490 "maturation of SSU-rRNA" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] [GO:0034455 "t-UTP
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC428.19c
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GenomeReviews:CU329671_GR HSSP:P16649 GO:GO:0032040 GO:GO:0030490
GO:GO:0034455 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK PIR:T40471
RefSeq:NP_595197.1 ProteinModelPortal:O94365 STRING:O94365
EnsemblFungi:SPBC428.19c.1 GeneID:2540858 KEGG:spo:SPBC428.19c
OrthoDB:EOG4TB7KP NextBio:20801974 Uniprot:O94365
Length = 494
Score = 154 (59.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 52/191 (27%), Positives = 91/191 (47%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
S S DK VK+WD++ G L H D V+ +W S L+SG +D ++ + D RI+
Sbjct: 141 SGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWM--SATRLVSGGYDGTIRLWDTRIAD 198
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259
++ ++ + P S V+S +IK +D+ + P T + S+ H
Sbjct: 199 PEVMSFSHGEAIDVVL--PMQSGSTVISAGGPSIKVWDLVAGRQTP--TKKLSN-----H 249
Query: 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 319
K++ ++ N LL+ G D VK++++S+ + + +G + S+ S DS
Sbjct: 250 QKSITCLAMNSENTRLLS-GGLDGHVKIYNISDWK---VVHGMKYSGPILSMGLSPDS-C 304
Query: 320 VLAIGGSKGKL 330
L +G S G L
Sbjct: 305 NLVVGMSNGTL 315
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 139 (54.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 54/206 (26%), Positives = 99/206 (48%)
Query: 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
N S S D+ +++WD+AAGK E HT V +VA++ + QI+ SGS D+++ + +
Sbjct: 77 NYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIV-SGSRDKTIKLWN- 134
Query: 196 RISTHSGFKWAVAAD-----VESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTS 249
T + K+ + D V + + P+ + +VS D T+K +++ K +
Sbjct: 135 ---TLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNH-- 189
Query: 250 QQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF 309
H H+ + T++ +P +L +G D LWDL++ + N A+
Sbjct: 190 -------HGHNGYLNTVTVSP-DGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINAL- 240
Query: 310 SVAFSEDSPFV-LAIGGSKGKLEIWD 334
FS + ++ +A G S ++IWD
Sbjct: 241 --CFSPNRYWLCVAYGPS---IKIWD 261
Score = 119 (46.9 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 60/229 (26%), Positives = 111/229 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH--HTDKVQAVAWN-HHS 177
HT VL +A++ + R I+ S S DK +K+W+ A +C T++ HTD V V ++ +HS
Sbjct: 105 HTKDVLSVAFSADNRQIV-SGSRDKTIKLWNTLA-ECKFTIQEDGHTDWVSCVRFSPNHS 162
Query: 178 PQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFV--VSLE-DGTIK 234
I++S +DR+V + W +A L + H + ++ V++ DG++
Sbjct: 163 NPIIVSCGWDRTVKV------------WNLANC--KLKNNHHGHNGYLNTVTVSPDGSLC 208
Query: 235 GFDIRTAKSDP-DSTSQQSSFTLHAHDKAVCTISYNPLVPNL-LATGSTDKMVKLWDLSN 292
+ +K+ D ++ +TL H+ + + ++P L +A G + +K+WDL+
Sbjct: 209 TSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPNRYWLCVAYGPS---IKIWDLAC 264
Query: 293 NQ------PSCIASRNPKAGA--VFSVAFSEDSPFVLAIGGSKGKLEIW 333
+ P + S KA S+A+S D + A G S + +W
Sbjct: 265 KKTVEELRPE-VVSPTSKADQPQCLSLAWSTDGQTLFA-GYSDNTIRVW 311
Score = 50 (22.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 4 NPNDAVIVCARNEDDVSHLEVYIL---EESDGGDPN--LYVHHHIIIPAFPLCMAWLDCP 58
NP D + + + D L V+ L E+++ G P LY H H I D
Sbjct: 24 NPKDPDTIISASRDKT--LIVWKLTRDEDTNYGYPQKRLYGHSHFIS----------DVV 71
Query: 59 LKDREKGNFMAVGSMEPAIEIWDL 82
L GN+ GS + + +WDL
Sbjct: 72 LSS--DGNYALSGSWDQTLRLWDL 93
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 152 (58.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT + + ++ NILAS S D +++W++ +C L HT + + + I
Sbjct: 67 HTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKG-NI 125
Query: 181 LLSGSFDRSVVMKDARISTHSG-FKWAVAAD---VESLAWDPHAEHSFVVSLE-DGTIKG 235
L+SGS D ++ + D I+++ G +AA V S+A P + S +VS DG ++
Sbjct: 126 LISGSSDETITIWD--ITSNGGKILTTLAAHSDPVSSIALTP--DDSIIVSASYDGLMRL 181
Query: 236 FDIRTA---KSDPDST-SQQSSFTLHAHDKAVCTISYNPLVPN--LLATGSTDKMVKLWD 289
FD++T+ K+ +ST + T +D I+ L PN + S D ++LW+
Sbjct: 182 FDLQTSQCLKTLTNSTFGGHGTATASTNDVINFPIAKVELSPNGQFILNSSLDGKIRLWN 241
Query: 290 LSNNQ 294
N+
Sbjct: 242 YMENK 246
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 29/107 (27%), Positives = 55/107 (51%)
Query: 246 DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA 305
++T+ + TL H K + I Y+P+ N+LA+ S D ++LW+++ Q CI
Sbjct: 54 NTTTGKLITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNIT--QQRCIKLLRKHT 111
Query: 306 GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG-ISNRFSKYSKP 351
+ ++ F++ +++ G S + IWD S+ G I + +S P
Sbjct: 112 YHITTLKFTQKGNILIS-GSSDETITIWDITSNGGKILTTLAAHSDP 157
>TAIR|locus:2136133 [details] [associations]
symbol:SPA2 "SPA1-related 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000719 InterPro:IPR001680
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161531 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
GO:GO:0080008 EMBL:AF080120 EMBL:AL049876 HOGENOM:HOG000029775
EMBL:AK229182 IPI:IPI00538672 PIR:T01922 PIR:T01923 PIR:T08190
RefSeq:NP_192849.4 UniGene:At.46392 ProteinModelPortal:Q9T014
SMR:Q9T014 IntAct:Q9T014 STRING:Q9T014 PRIDE:Q9T014
EnsemblPlants:AT4G11110.1 GeneID:826712 KEGG:ath:AT4G11110
GeneFarm:3132 TAIR:At4g11110 InParanoid:Q0WP97 OMA:FGGHTNE
PhylomeDB:Q9T014 ProtClustDB:CLSN2920287 Genevestigator:Q9T014
Uniprot:Q9T014
Length = 1036
Score = 158 (60.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 52/165 (31%), Positives = 74/165 (44%)
Query: 127 GLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF 186
G+ WN RN LAS+ D VK+WDV G+ H + +V ++ P L SGS
Sbjct: 777 GVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSD 836
Query: 187 DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD 246
D SV + + G +A +V + + P + H D +D+R ++ P
Sbjct: 837 DCSVKLWNINERNCLGTIRNIA-NVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRT-PW 894
Query: 247 STSQQSSFTLHAHDKAVCTISYNPLVPN-LLATGSTDKMVKLWDL 290
L H+KAV SY + N L T STD +KLWDL
Sbjct: 895 CI-------LSGHNKAV---SYAKFLDNETLVTASTDNTLKLWDL 929
>FB|FBgn0001086 [details] [associations]
symbol:fzy "fizzy" species:7227 "Drosophila melanogaster"
[GO:0008054 "cyclin catabolic process" evidence=IMP;IDA]
[GO:0005813 "centrosome" evidence=IDA;TAS] [GO:0005819 "spindle"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA;TAS] [GO:0007096 "regulation
of exit from mitosis" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0030162 "regulation of proteolysis" evidence=TAS]
[GO:0007049 "cell cycle" evidence=IMP] [GO:0009987 "cellular
process" evidence=IMP] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS;IDA] [GO:0005680 "anaphase-promoting complex"
evidence=ISS;IDA] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=IDA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0007147 "female meiosis II" evidence=IMP]
[GO:0007144 "female meiosis I" evidence=IGI] [GO:0051488
"activation of anaphase-promoting complex activity" evidence=ISS]
[GO:0007067 "mitosis" evidence=IMP] [GO:0030718 "germ-line stem
cell maintenance" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005813 GO:GO:0006911
GO:GO:0000776 GO:GO:0007067 EMBL:AE014134 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030162 GO:GO:0008054
GO:GO:0007096 GO:GO:0030718 KO:K03363 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 GO:GO:0007144 GO:GO:0007147
EMBL:U22419 EMBL:BT029432 EMBL:BT056243 RefSeq:NP_477501.1
UniGene:Dm.4066 SMR:Q24044 MINT:MINT-922907 STRING:Q24044
EnsemblMetazoa:FBtr0080833 GeneID:34968 KEGG:dme:Dmel_CG4274
UCSC:CG4274-RA CTD:34968 FlyBase:FBgn0001086 InParanoid:Q24044
OrthoDB:EOG4W3R3B GenomeRNAi:34968 NextBio:791144 Uniprot:Q24044
Length = 526
Score = 154 (59.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 52/210 (24%), Positives = 98/210 (46%)
Query: 128 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD 187
L+W +E + ILA ++ V++WD + K ++ H+ +V ++AWN ++ SGS D
Sbjct: 257 LSWIQEGQ-ILAIGNSTGAVELWDCSKVKRLRVMDGHSARVGSLAWNSF---LVSSGSRD 312
Query: 188 RSVVMKDARISTHS-GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD 246
++V D R H +V L W + ++ S G ++ +A S
Sbjct: 313 GTIVHHDVRAREHKLSTLSGHTQEVCGLKWS--TDFKYLAS--GGNDNLVNVWSAASGGV 368
Query: 247 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQ-PSCIASRNP 303
T+ + H AV +++ P P+ LA+G + D+ +K W+++N + S++
Sbjct: 369 GTATDPLHKFNDHQAAVRALAWCPWQPSTLASGGGTADRCIKFWNVNNGTLMKSVDSKSQ 428
Query: 304 KAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+FS + E + A G + +L IW
Sbjct: 429 VCSLLFSRHYKE---LISAHGFANNQLTIW 455
>ZFIN|ZDB-GENE-040426-2012 [details] [associations]
symbol:wdr24 "WD repeat domain 24" species:7955
"Danio rerio" [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2012 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 EMBL:BC045501 IPI:IPI00491202 RefSeq:NP_998228.1
UniGene:Dr.79568 ProteinModelPortal:Q7ZVL2 GeneID:406336
KEGG:dre:406336 InParanoid:Q7ZVL2 NextBio:20817956
ArrayExpress:Q7ZVL2 Uniprot:Q7ZVL2
Length = 779
Score = 156 (60.0 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 55/178 (30%), Positives = 83/178 (46%)
Query: 124 SVLGLAWNKEFRNILASASADKQVKIWDVAA---GKCNLTLEHHTDKVQAVAWNHHSPQI 180
S + W++ N+LA+A+ + V W+++ K H V V ++ +
Sbjct: 70 SCADVMWHQMEENLLATAATNGAVVTWNLSRPCRNKQEQLFTEHKRTVNKVCFHPTEVNM 129
Query: 181 LLSGSFDRSVVMKDAR----ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
LLSGS D + D R +ST SG +V DV+ D +F S E+G ++ +
Sbjct: 130 LLSGSQDGFMKCFDLRKKESVSTFSGQSESVR-DVQFSMKD---YFTFAASFENGNVQLW 185
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
DIR PD + FT H C ++P LATG DKMVK+WD+S N+
Sbjct: 186 DIRR----PDRYERM--FTAHTGPVFCC--DWHPEDRGWLATGGRDKMVKVWDMSTNR 235
>TAIR|locus:2040731 [details] [associations]
symbol:AT2G37670 "AT2G37670" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AC004684 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 IPI:IPI00535445 PIR:T02533 RefSeq:NP_181303.1
UniGene:At.50121 ProteinModelPortal:O80935 SMR:O80935
EnsemblPlants:AT2G37670.1 GeneID:818344 KEGG:ath:AT2G37670
TAIR:At2g37670 HOGENOM:HOG000239143 InParanoid:O80935 OMA:GWIKVRQ
PhylomeDB:O80935 ProtClustDB:CLSN2683085 ArrayExpress:O80935
Genevestigator:O80935 Uniprot:O80935
Length = 903
Score = 162 (62.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 50/215 (23%), Positives = 97/215 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H D++L L+W+K +L S+S DK V++WD+ C L L H D V + ++
Sbjct: 505 HLDAILDLSWSKS--QLLLSSSMDKTVRLWDIETKTC-LKLFAHNDYVTCIQFSPVDENY 561
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLA-WDPHAEHSFVVSLEDGTIKGFDIR 239
LSGS D + + I +W+ ++ + A + P + + + S G + +D
Sbjct: 562 FLSGSLDAKIRIWS--IQDRHVVEWSDLHEMVTAACYTPDGQGALIGS-HKGICRAYDTE 618
Query: 240 TAK-SDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298
K S + QS+ A K + + ++P+ P+ + S D +++ D S
Sbjct: 619 DCKLSQTNQIDVQSNKKSQAKRK-ITSFQFSPVNPSEVLVTSADSRIRILDGSEVIHKFK 677
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
RN + S ++S+D +++ ++ +W
Sbjct: 678 GFRN--TCSQLSASYSQDGKYIIC-ASEDSQVYLW 709
Score = 38 (18.4 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 59 LKDREKGNFMAVGSMEPAIEIWDL 82
+K + +++A G + I +W++
Sbjct: 410 IKFSQDAHYLASGGADRVIHVWEV 433
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 164 (62.8 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 43/168 (25%), Positives = 89/168 (52%)
Query: 132 KEFRNILASASADKQVKIWD-VAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFDR 188
+ +R ++A+A+ + V IW+ V G ++ H+ V +AW+ +L+GS D
Sbjct: 80 ENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDN 139
Query: 189 SVVMKDARISTH-SGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD 246
++ M D R S + S ++ ++ + + ++P + F + ++GTI+ +DIR P
Sbjct: 140 TLRMWDIRDSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRK----PT 195
Query: 247 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294
++ + +H V TI ++P N++A+G D+ +++WD SN +
Sbjct: 196 IAVEK----ITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGK 239
Score = 119 (46.9 bits), Expect = 0.00082, P = 0.00082
Identities = 30/134 (22%), Positives = 59/134 (44%)
Query: 211 VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 270
V LAW P + +D T++ +DIR DS + S T +++ + +NP
Sbjct: 119 VNKLAWHPEKLDCILTGSQDNTLRMWDIR------DSANA-SKITFSPKSESIRDVQFNP 171
Query: 271 LVPNLLATGSTDKMVKLWDLSNNQPSCIASR-NPKAGAVFSVAFSEDSPFVLAIGGSKGK 329
N A + ++LWD+ +P+ + G V ++ + + ++A GG
Sbjct: 172 SQANQFAAAFDNGTIQLWDI--RKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRA 229
Query: 330 LEIWDTLSDAGISN 343
+ +WD + ++N
Sbjct: 230 IRVWDFSNGKSLNN 243
Score = 37 (18.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 285 VKLWDLSNNQPSC 297
+K W + NQ SC
Sbjct: 998 MKSWFIDKNQKSC 1010
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 59/229 (25%), Positives = 103/229 (44%)
Query: 131 NKEFRNILASASADKQVKIWDVA-------------AGKCN---LTLEHHTDKVQAVAWN 174
N ++LAS +V IWD+A + K N T+ H + A+ W+
Sbjct: 196 NSSKESLLASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWS 255
Query: 175 HHSPQILLSGSFDRSVVM---KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 231
LLSG + + + T S + A VE L W P ++ F DG
Sbjct: 256 PFEYS-LLSGDNANEIFLTKYSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSCDG 314
Query: 232 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKA-VCTISYNPLVPNLLATGSTDKMVKLWDL 290
T + +D+R + + S+ T++AH V +S+N VPNLLATG+ + + +WDL
Sbjct: 315 TFRIWDVRNKQ-------KTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDL 367
Query: 291 -----SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
S++ + +AS ++S+ + + V+ + G+ ++ +WD
Sbjct: 368 RSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWD 416
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVA-AGKCN-LTLEHHTD-KVQAVAWNHHS 177
HT +V L W+ +N+ +S S D +IWDV K + LT+ H V ++WN
Sbjct: 290 HTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRV 349
Query: 178 PQILLSGS-------FDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLE 229
P +L +G+ +D + + ++T + FKW A + S+ W P+ + V
Sbjct: 350 PNLLATGADNGVWSVWDLRSLKSSSSVATPVASFKWH-RAPIYSIEWHPNEDSVIGVVGA 408
Query: 230 DGTIKGFDIRTAKSDPDSTSQ 250
D I +D+ + + S+
Sbjct: 409 DNQISLWDLSVELDEEEQDSR 429
>TAIR|locus:2127263 [details] [associations]
symbol:FZR2 "AT4G22910" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0016049 "cell growth" evidence=IMP] [GO:0042023 "DNA
endoreduplication" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007276 "gamete generation" evidence=RCA]
[GO:0032875 "regulation of DNA endoreduplication" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051302 "regulation of cell division"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016049 eggNOG:COG2319 GO:GO:0016567
EMBL:AL031018 EMBL:AL161558 GO:GO:0010091 GO:GO:0042023
HOGENOM:HOG000195514 KO:K03364 ProtClustDB:CLSN2918069
EMBL:AY099585 EMBL:AY128834 IPI:IPI00520561 PIR:T05122
RefSeq:NP_194022.3 UniGene:At.2372 ProteinModelPortal:Q8L3Z8
SMR:Q8L3Z8 IntAct:Q8L3Z8 STRING:Q8L3Z8 EnsemblPlants:AT4G22910.1
GeneID:828390 KEGG:ath:AT4G22910 GeneFarm:2841 TAIR:At4g22910
InParanoid:Q8L3Z8 OMA:DASRCKR PhylomeDB:Q8L3Z8
Genevestigator:Q8L3Z8 Uniprot:Q8L3Z8
Length = 483
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 59/215 (27%), Positives = 101/215 (46%)
Query: 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL 182
DSV + W ++ S K V+IWD + K T+E H +V A+AW +L
Sbjct: 218 DSVCSVGWALRGTHLAVGTSTGK-VQIWDASRCKRTRTMEGHRLRVGALAWGS---SVLS 273
Query: 183 SGSFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241
SGS D+S++ +D R K A ++V L W L G G D R
Sbjct: 274 SGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRE-----LASG---GNDNRLF 325
Query: 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIA 299
+ ST ++ H AV I+++P V LLA+G + D+ ++ W+ + N + ++
Sbjct: 326 VWNQHSTQPVLKYS--EHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTN--THLS 381
Query: 300 SRNPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIW 333
S + V ++A+S++ + V G S+ ++ +W
Sbjct: 382 SIDT-CSQVCNLAWSKNVNELVSTHGYSQNQIIVW 415
Score = 118 (46.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 46/172 (26%), Positives = 79/172 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V GL W+ + R LAS D ++ +W+ + + L HT V+A+AW+ H +
Sbjct: 299 HKSEVCGLKWSYDNRE-LASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGL 357
Query: 181 LLSG--SFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
L SG + DR + + +TH + V +LAW + +VS G + I
Sbjct: 358 LASGGGTADRCIRFWNTTTNTHLS-SIDTCSQVCNLAWSKNVNE--LVSTH-GYSQN-QI 412
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
K P T + + TL H V ++ +P + TG+ D+ ++ W++
Sbjct: 413 IVWKY-P--TMSKIA-TLTGHTYRVLYLAVSP-DGQTIVTGAGDETLRFWNV 459
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 64 KGNFMAVGSMEPAIEIWD 81
+G +AVG+ ++IWD
Sbjct: 228 RGTHLAVGTSTGKVQIWD 245
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 153 (58.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 47/152 (30%), Positives = 69/152 (45%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAW-NHHSPQILLSGSFDRSVVMKDARIS 198
+ SAD+ +KIWDVA G LTL H ++V+ +A N H+ + S D+ V D +
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT--YMFSAGDDKQVKCWDLEQN 250
Query: 199 THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA 258
+ V LA P + + D + +DIRT + F L
Sbjct: 251 KVIRSYHGHLSGVYCLALHPTLD-VLLTGGRDSVCRVWDIRT---------KMQIFALSG 300
Query: 259 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290
HD VC++ P P ++ TGS D +K WDL
Sbjct: 301 HDNTVCSVFTRPTDPQVV-TGSHDTTIKFWDL 331
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 52/195 (26%), Positives = 82/195 (42%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199
SA DKQVK WD+ K + H V +A H + +LL+G D + D R
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLAL-HPTLDVLLTGGRDSVCRVWDIRTKM 293
Query: 200 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259
F + + + + V D TIK +D+R K+ S+ T H H
Sbjct: 294 QI-FALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKT-------MSTLT-H-H 343
Query: 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 319
K+V ++ +P N A+ S D K + L + C + + + ++A +ED
Sbjct: 344 KKSVRAMTLHPK-ENAFASASADN-TKKFSLPKGE-FCHNMLSQQKTIINAMAVNEDG-- 398
Query: 320 VLAIGGSKGKLEIWD 334
V+ GG G + WD
Sbjct: 399 VMVTGGDNGSIWFWD 413
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 152 (58.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 51/180 (28%), Positives = 84/180 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH------HTDKVQAVAWN 174
H+ GL+W+K + L S S D Q+ +WD+ A N +L+ H V+ VAW+
Sbjct: 177 HSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWH 236
Query: 175 HHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA---DVESLAWDPHAEHSFVVSLEDG 231
+ S D+ +++ D R + S +V A +V LA++P E D
Sbjct: 237 LRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDK 296
Query: 232 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291
T+K FD+R ST+ T +H + V + +NP +LA+ + + +WDLS
Sbjct: 297 TVKLFDLRKL-----STALH---TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 57/215 (26%), Positives = 99/215 (46%)
Query: 137 ILASASADKQVKIWDVAA--------GKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSF 186
I+A+ + + +V ++D + G CN L L H+ + ++W+ LLSGS
Sbjct: 140 IIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSD 199
Query: 187 DRSVVM-------KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
D + + K+ + FK A VE +AW E+ F +D + +D+R
Sbjct: 200 DAQICLWDINATPKNKSLDAQQIFK-AHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
+ P ++ S AH V +++NP ++ATGSTDK VKL+DL + +
Sbjct: 259 S----PSASKPVQSVV--AHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL-RKLSTALH 311
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ + VF V ++ + +LA +L +WD
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 38/184 (20%), Positives = 85/184 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV---AAGKCNLTLEHHTDKVQAVAWNHHS 177
H V +AW+ + S D+ + IWD+ +A K ++ H+ +V +A+N +
Sbjct: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFN 285
Query: 178 PQILLSGSFDRSVVMKDAR-ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
++ +GS D++V + D R +ST + +V + W+P E + +
Sbjct: 286 EWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
Query: 237 DIRTAKSDPDSTSQQSS------FTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
D+ ++ D + T + + +H H + S+NP ++++ + D ++++W
Sbjct: 346 DL--SRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
Query: 290 LSNN 293
++ N
Sbjct: 404 MAEN 407
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 158 (60.7 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 58/240 (24%), Positives = 106/240 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V G+ ++ + + S D ++K+W+ +C TL H D ++ V ++H +P I
Sbjct: 50 HEGPVRGVHFHNS-QPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWI 108
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIR 239
+ S S D+++ + + + T V ++ H + VVS D T++ +DI
Sbjct: 109 V-SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF--HPKEDLVVSASLDQTVRVWDIG 165
Query: 240 TAK----SDPDST---SQQSS-----------FTLHAHDKAVCTISYNPLVPNLLATGST 281
K S D SQ +S + L HD+ V S++P +P L+ +G+
Sbjct: 166 ALKKKSASPADDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLP-LIVSGAD 224
Query: 282 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341
D+ VKLW ++ + + + V SV F +++ K + +WD GI
Sbjct: 225 DRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKS-IRVWDATKRTGI 283
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 146 (56.5 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 52/175 (29%), Positives = 84/175 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHHSP 178
H ++ + W+ LASAS D IW ++G+ CN TLE H ++V++V+W+ S
Sbjct: 58 HKRTIREIRWSP-CGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SG 115
Query: 179 QILLSGSFDRSVVMKDARISTHSGFKWAVAA-----DVESLAWDPHAEHSFVVSLEDGTI 233
+L + S D+SV + + ++ F+ A DV+ + W P E S D TI
Sbjct: 116 GLLATCSRDKSVWIWE--VAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASY-DNTI 172
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288
K F SD D + TL +H V +I ++ L++ S D +K+W
Sbjct: 173 KMFAEDALDSDWDCVA-----TLSSHTSTVWSIDFDATGERLVSC-SDDTSLKIW 221
Score = 42 (19.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 64 KGNFMAVGSMEPAIEIWDLD 83
KGN A + AI IW L+
Sbjct: 25 KGNVFASCGEDKAIRIWSLN 44
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 115 (45.5 bits), Expect = 0.00070, P = 0.00070
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKV-QAVAWNHHSPQ 179
H ++V + W+ + SAS D +++WDV +G TL + KV ++++ +
Sbjct: 256 HMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLKSTLTGN--KVFNCISYSPLCKR 311
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKGF 236
L SGS DR + + D R S ++ + V S+ W P E + D +K +
Sbjct: 312 -LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 282
D R+ K+ P + L AH+ V ++ + LL +G D
Sbjct: 371 DTRSCKA-P-------LYDLAAHEDKVLSVDWTDT--GLLLSGGAD 406
Score = 110 (43.8 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 42/128 (32%), Positives = 61/128 (47%)
Query: 211 VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 270
V S+ W AE S D TI+ +D+ +S S +S+ T +K ISY+P
Sbjct: 260 VSSVLWSD-AEEICSASW-DHTIRVWDV-------ESGSLKSTLT---GNKVFNCISYSP 307
Query: 271 LVPNLLATGSTDKMVKLWDLSNNQPSCIA-SRNPKAGAVFSVAFSEDSPFVLAIGGSKGK 329
L L A+GSTD+ ++LWD S ++ S G V SV +S L G
Sbjct: 308 LCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 366
Query: 330 LEIWDTLS 337
+++WDT S
Sbjct: 367 VKLWDTRS 374
Score = 86 (35.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H D + + +E+ + + S DK +IW + GK +T+ HTD V+ VAW
Sbjct: 100 HDDWISSIKGAEEW---ILTGSYDKTSRIWSLE-GKSIMTIVGHTDVVKDVAWVKKDSLS 155
Query: 180 -ILLSGSFDRSVVM 192
+LLS S D+++++
Sbjct: 156 CLLLSASMDQTILL 169
Score = 68 (29.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 121 HTDSVLGLAWNKE--FRNILASASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWN 174
HTD V +AW K+ +L SAS D+ + +W+ + + H H V ++A +
Sbjct: 139 HTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVD 198
Query: 175 HHSPQILLSGSFDR 188
+ SGS+D+
Sbjct: 199 GSGTKFC-SGSWDK 211
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 115 (45.5 bits), Expect = 0.00070, P = 0.00070
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKV-QAVAWNHHSPQ 179
H ++V + W+ + SAS D +++WDV +G TL + KV ++++ +
Sbjct: 256 HMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLKSTLTGN--KVFNCISYSPLCKR 311
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKWAVAAD---VESLAWDPHAEHSFVVSLEDGTIKGF 236
L SGS DR + + D R S ++ + V S+ W P E + D +K +
Sbjct: 312 -LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 282
D R+ K+ P + L AH+ V ++ + LL +G D
Sbjct: 371 DTRSCKA-P-------LYDLAAHEDKVLSVDWTDT--GLLLSGGAD 406
Score = 110 (43.8 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 42/128 (32%), Positives = 61/128 (47%)
Query: 211 VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 270
V S+ W AE S D TI+ +D+ +S S +S+ T +K ISY+P
Sbjct: 260 VSSVLWSD-AEEICSASW-DHTIRVWDV-------ESGSLKSTLT---GNKVFNCISYSP 307
Query: 271 LVPNLLATGSTDKMVKLWDLSNNQPSCIA-SRNPKAGAVFSVAFSEDSPFVLAIGGSKGK 329
L L A+GSTD+ ++LWD S ++ S G V SV +S L G
Sbjct: 308 LCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 366
Query: 330 LEIWDTLS 337
+++WDT S
Sbjct: 367 VKLWDTRS 374
Score = 86 (35.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H D + + +E+ + + S DK +IW + GK +T+ HTD V+ VAW
Sbjct: 100 HDDWISSIKGAEEW---ILTGSYDKTSRIWSLE-GKSIMTIVGHTDVVKDVAWVKKDSLS 155
Query: 180 -ILLSGSFDRSVVM 192
+LLS S D+++++
Sbjct: 156 CLLLSASMDQTILL 169
Score = 68 (29.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 121 HTDSVLGLAWNKE--FRNILASASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWN 174
HTD V +AW K+ +L SAS D+ + +W+ + + H H V ++A +
Sbjct: 139 HTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVD 198
Query: 175 HHSPQILLSGSFDR 188
+ SGS+D+
Sbjct: 199 GSGTKFC-SGSWDK 211
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 110 (43.8 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 47/142 (33%), Positives = 67/142 (47%)
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL 256
I T SG K A++ S+ W AE S D TI +D+ +S S +S+ T
Sbjct: 250 IVTLSGHKEAIS----SVLWSD-AEEICSASW-DHTIGVWDV-------ESGSLKSTLT- 295
Query: 257 HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA-SRNPKAGAVFSVAFSE 315
+K ISY+PL L A+GSTD+ ++LWD S ++ S G V SV +S
Sbjct: 296 --GNKVFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSP 352
Query: 316 DSPFVLAIGGSKGKLEIWDTLS 337
L G +++WDT S
Sbjct: 353 THEQQLISGSLDNIVKLWDTRS 374
Score = 86 (35.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQ- 179
H D + + +E+ + + S DK +IW + GK +T+ HTD V+ VAW
Sbjct: 100 HDDWISAIEGAEEW---ILTGSYDKTSRIWS-SEGKSIMTIVGHTDVVKDVAWVKKDSLS 155
Query: 180 -ILLSGSFDRSVVM 192
+LLS S D+++++
Sbjct: 156 CLLLSASMDQTILL 169
Score = 68 (29.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 121 HTDSVLGLAWNKE--FRNILASASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWN 174
HTD V +AW K+ +L SAS D+ + +W+ + + H H V ++A +
Sbjct: 139 HTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVD 198
Query: 175 HHSPQILLSGSFDR 188
+ SGS+D+
Sbjct: 199 STGTRFC-SGSWDK 211
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 149 (57.5 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 60/233 (25%), Positives = 106/233 (45%)
Query: 121 HTDSVLGLAWNKEFRN---ILASASADKQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNH 175
H D++ +AW K +N + S S D VK+W K +L TLE H V +V +H
Sbjct: 15 HDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 176 HSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVE--SLAWDPHAEHSFVVSLEDGTI 233
+ I S S D + + D + T K A V+ SLA+ P ++ G +
Sbjct: 75 -TGSIAASSSLDAHIRLWD--LETGKQIKSIDAGPVDAWSLAFSPDSQF-LATGSHVGKV 130
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293
F + T K + ++L K + +I+Y+P LA+G+ D ++ ++D++
Sbjct: 131 NIFGVETGKKE---------YSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATG 180
Query: 294 QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 346
+ + + A + S+ FS DS +L G ++I+D + A ++ S
Sbjct: 181 K--LLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYD-VQHANLAGTLS 229
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 49/200 (24%), Positives = 90/200 (45%)
Query: 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195
+I AS+S D +++WD+ GK +++ ++A++ S Q L +GS V +
Sbjct: 77 SIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDS-QFLATGSHVGKVNIFGV 135
Query: 196 RISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 255
+ S+A+ P ++ ++ DG I FDI T K T
Sbjct: 136 ETGKKEYSLDTRGKFILSIAYSPDGKYLASGAI-DGIINIFDIATGKL---------LHT 185
Query: 256 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGA-VFSVAFS 314
L H + +++++P LL T S D +K++D+ Q + +A G+ V +VAF
Sbjct: 186 LEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDV---QHANLAGTLSGHGSWVLNVAFC 241
Query: 315 EDSPFVLAIGGSKGKLEIWD 334
D ++ K +++WD
Sbjct: 242 PDDTHFVSSSSDKS-VKVWD 260
Score = 113 (44.8 bits), Expect = 0.00065, P = 0.00065
Identities = 42/165 (25%), Positives = 82/165 (49%)
Query: 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSG 184
+L +A++ + + LAS + D + I+D+A GK TLE H ++++ ++ S Q+L++
Sbjct: 151 ILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-QLLVTA 208
Query: 185 SFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSD 244
S D + + D + + +G + V ++A+ P H FV S D ++K +D T
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTH-FVSSSSDKSVKVWDAGTR--- 264
Query: 245 PDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
T + F H V + YN +++ G D+ + ++D
Sbjct: 265 ---TCVHTFFD---HQDQVWGVKYNGSGSKIVSVGD-DQEIHIYD 302
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 152 (58.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 52/197 (26%), Positives = 85/197 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV-------AAGKCNLTLEHHTDKVQAVAW 173
HT + WN + L S S D + WD+ +A + + H +V V +
Sbjct: 183 HTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRF 242
Query: 174 NHHSPQILLSGSFDRSVVMKDAR---ISTHSGFK-WAVAADVESLAWDPHAEHSFVVSLE 229
++ +L S S+D+ + + D R ST A + + S+A++PH +
Sbjct: 243 HYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCST 302
Query: 230 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
D TI +D+R Q TL H+ V IS++P +LA+ S D+ +WD
Sbjct: 303 DKTIALWDLRNLN--------QRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWD 354
Query: 290 LSN---NQPSCIASRNP 303
LS +QP+ A P
Sbjct: 355 LSRIGEDQPAEEAQDGP 371
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 54/188 (28%), Positives = 86/188 (45%)
Query: 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADV---ESLAWD 217
L HT +V WN S L+SGS D ++ D S + + E D
Sbjct: 180 LTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSD 239
Query: 218 P--HAEHS-FVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 273
H +H + S+ D + DIR PD++++ + ++HAH + ++++NP
Sbjct: 240 VRFHYKHQDLLASVSYDQYLHVHDIRR----PDASTKPAR-SVHAHSGPIHSVAFNPHND 294
Query: 274 NLLATGSTDKMVKLWDLSN-NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEI 332
+LAT STDK + LWDL N NQ + + V ++FS +LA + + +
Sbjct: 295 FILATCSTDKTIALWDLRNLNQR--LHTLEGHEDIVTKISFSPHEEPILASTSADRRTLV 352
Query: 333 WDTLSDAG 340
WD LS G
Sbjct: 353 WD-LSRIG 359
Score = 112 (44.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 43/184 (23%), Positives = 83/184 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDV----AAGKCNLTLEHHTDKVQAVAWNHH 176
H V + ++ + +++LAS S D+ + + D+ A+ K ++ H+ + +VA+N H
Sbjct: 233 HEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPH 292
Query: 177 SPQILLSGSFDRSVVMKDARISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLEDGTIKG 235
+ IL + S D+++ + D R D V +++ PH E + D
Sbjct: 293 NDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLV 352
Query: 236 FDI-RTAKSDPDSTSQQSS-FTLHAHD-KAVCTISYNPLVPNL---LATGSTDKMVKLWD 289
+D+ R + P +Q L H CTI + PN +AT + D ++++W
Sbjct: 353 WDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMD-WCPNYNWTMATAAEDNILQIWT 411
Query: 290 LSNN 293
S +
Sbjct: 412 PSRS 415
Score = 43 (20.2 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 64 KGNFMAVGSMEPAIEIWDLDVIDE 87
KG ++ GS + + WDL+ +E
Sbjct: 197 KGTLVS-GSQDATLSCWDLNAYNE 219
>UNIPROTKB|Q12834 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9606 "Homo sapiens" [GO:0051301 "cell division"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050773
"regulation of dendrite development" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;TAS]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0090129
"positive regulation of synapse maturation" evidence=ISS]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=ISS] [GO:0005819 "spindle" evidence=TAS] [GO:0007049 "cell
cycle" evidence=TAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005813 GO:GO:0048471 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0043234 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007094 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
EMBL:CH471059 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0051436 GO:GO:0050773 GO:GO:0000922 Reactome:REACT_8017
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0051437
GO:GO:0040020 GO:GO:0000236 PDB:4GGD PDBsum:4GGD GO:GO:0051488
KO:K03363 EMBL:U05340 EMBL:AF099644 EMBL:AK312780 EMBL:BT007388
EMBL:DQ473545 EMBL:AL139289 EMBL:BC000624 EMBL:BC001088
EMBL:BC006272 EMBL:BC009425 EMBL:BC009426 EMBL:BC010044
EMBL:BC012803 EMBL:BC012827 EMBL:BC013303 EMBL:BC015998
EMBL:BC024257 EMBL:BC031294 EMBL:BC110321 IPI:IPI00329526
PIR:A56021 RefSeq:NP_001246.2 UniGene:Hs.524947 PDB:4GGA PDB:4GGC
PDBsum:4GGA PDBsum:4GGC ProteinModelPortal:Q12834 SMR:Q12834
DIP:DIP-29655N IntAct:Q12834 MINT:MINT-2211271 STRING:Q12834
PhosphoSite:Q12834 DMDM:37537762 PaxDb:Q12834 PRIDE:Q12834
DNASU:991 Ensembl:ENST00000310955 Ensembl:ENST00000372462
GeneID:991 KEGG:hsa:991 UCSC:uc001cix.3 CTD:991
GeneCards:GC01P043824 H-InvDB:HIX0034879 HGNC:HGNC:1723
HPA:CAB004525 MIM:603618 neXtProt:NX_Q12834 PharmGKB:PA26257
HOGENOM:HOG000195514 HOVERGEN:HBG001024 InParanoid:Q12834
OMA:RTPGKSN OrthoDB:EOG4CC414 PhylomeDB:Q12834 GenomeRNAi:991
NextBio:4160 PMAP-CutDB:Q12834 ArrayExpress:Q12834 Bgee:Q12834
CleanEx:HS_CDC20 Genevestigator:Q12834 GermOnline:ENSG00000117399
Uniprot:Q12834
Length = 499
Score = 153 (58.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 53/213 (24%), Positives = 99/213 (46%)
Query: 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSG 184
+ +AW KE N LA ++ +V++WDV K + H+ +V +++WN + IL SG
Sbjct: 229 ISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY---ILSSG 284
Query: 185 SFDRSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKS 243
S + D R++ H + + +V L W P H L G + S
Sbjct: 285 SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH-----LASGGNDNL-VNVWPS 338
Query: 244 DPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIASR 301
P T H AV +++ P N+LATG ++D+ +++W++ + +C+++
Sbjct: 339 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--ACLSAV 396
Query: 302 NPKAGAVFSVAFSED-SPFVLAIGGSKGKLEIW 333
+ + V S+ +S + G ++ +L IW
Sbjct: 397 DAHS-QVCSILWSPHYKELISGHGFAQNQLVIW 428
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 155 (59.6 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 63/233 (27%), Positives = 104/233 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HT V A+ E N+L S S D +++W + C +T H V V + H
Sbjct: 449 HTGPVYRCAFAPEM-NLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHG-YY 506
Query: 181 LLSGSFDRSVVMKDARI-STHSGFKWAV----AADVESLAWDPHAEHSFVVSLEDGTIKG 235
+S S+D K AR+ +T S V +DV+ + + P++ + S D T++
Sbjct: 507 FVSCSYD-----KTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGS-SDRTVRL 560
Query: 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295
+D T QS + H +V +++++ LA+GS D + +WDLSN
Sbjct: 561 WDNMTG---------QSVRLMTGHKGSVSSLAFSAC-GRYLASGSVDHNIIIWDLSNG-- 608
Query: 296 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD--TLSDAGISNRFS 346
S + + V ++ FS D VLA G L +WD +++ ISN +
Sbjct: 609 SLVTTLLRHTSTVTTITFSRDGT-VLAAAGLDNNLTLWDFHKVTEDYISNHIT 660
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 154 (59.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 68/215 (31%), Positives = 99/215 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
HTDSVL L ++ +L S SAD VK+W + GK +TL HT V +V +
Sbjct: 352 HTDSVLCLTFDS---TLLVSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRG-L 406
Query: 181 LLSGSFDRSVVMKDARIST--HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238
+LSGS D ++ + +T H+ F A V+SLA F SL DGTIK +DI
Sbjct: 407 VLSGSDDSTIKIWSLETNTCLHT-FS-AHIGPVQSLALAD--SRLFSCSL-DGTIKQWDI 461
Query: 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298
K TL H + V I+ + L L +G+ D +VK+W+ C+
Sbjct: 462 EKKKC---------VHTLFGHIEGVWEIAADHL---RLISGAHDGVVKVWEACE----CV 505
Query: 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+ + V SVA + + G GK+ +W
Sbjct: 506 HTLKNHSEPVTSVALGDCE---VVSGSEDGKIYLW 537
Score = 90 (36.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H+D V+ L + RNILAS S D +++W++A + LE H+ V + ++
Sbjct: 272 HSDGVMCL---QLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK--- 325
Query: 181 LLSGSFDRSVVMKDARIS 198
L+SGS D+++ + + R S
Sbjct: 326 LISGSMDKTIRIWNYRTS 343
Score = 75 (31.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 275 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
L+ +GS D +K+W L N +C+ + + G V S+A ++ F ++ G+ ++ WD
Sbjct: 406 LVLSGSDDSTIKIWSLETN--TCLHTFSAHIGPVQSLALADSRLFSCSLDGT---IKQWD 460
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 155 (59.6 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 63/234 (26%), Positives = 103/234 (44%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG-KCNLTLEHHTDKVQAVAWNHHSPQ 179
+ D +L + + E LA A+ K K++D C L + H +D V ++A S
Sbjct: 336 YNDEILDMCFMGEHDRYLAVATNSKHFKLYDTEHDMNCKLIVGH-SDTVMSLA---ASQN 391
Query: 180 ILLSGSFDRSVVM------KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTI 233
+L+S D SV + KD + + + + +A + F +DG++
Sbjct: 392 LLISVGKDCSVRLWRLQHDKDCSLEALTQQANCHTSTIGCVAMTHNGATGFASVSQDGSM 451
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293
K + + +K D +S S + +HDK V ++Y P L+AT S DK K+W +N
Sbjct: 452 KVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPN-NKLIATASQDKTAKVWLAESN 510
Query: 294 QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 347
+ R G V+SV FS VL S L IW ++S+ RF +
Sbjct: 511 TLQGVL-RGHTRG-VWSVRFSPVDQIVLT-SSSDCTLRIW-SISNFSCIKRFDQ 560
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 149 (57.5 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 71/223 (31%), Positives = 102/223 (45%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIW-----DVAAGKCNLTLEHHTDKVQAVAWNH 175
HTD V +A + +I+ SAS DK + +W D A G L H+ V+ V +
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS 73
Query: 176 HSPQILLSGSFDRSVVMKD--ARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTI 233
Q LSGS+D + + D A +ST F DV S+A+ V + D TI
Sbjct: 74 DG-QFALSGSWDGELRLWDLAAGVSTRR-FV-GHTKDVLSVAFSLD-NRQIVSASRDRTI 129
Query: 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT-ISYNPLVPNLLATGSTDKMVKLWDLSN 292
K ++ T + S+ H D C S N L P +++ S DK VK+W+LSN
Sbjct: 130 KLWN--TLGECKYTISEGGEG--H-RDWVSCVRFSPNTLQPTIVSA-SWDKTVKVWNLSN 183
Query: 293 NQ-PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ S +A G V +VA S D + A GG G + +WD
Sbjct: 184 CKLRSTLAGHT---GYVSTVAVSPDGS-LCASGGKDGVVLLWD 222
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 52/201 (25%), Positives = 96/201 (47%)
Query: 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSV----VMKDA 195
S S D ++++WD+AAG HT V +VA++ + QI+ S S DR++ + +
Sbjct: 80 SGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGEC 138
Query: 196 RISTHSGFKWAVAAD-VESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSS 253
+ + G + D V + + P+ +VS D T+K +++ K +S
Sbjct: 139 KYTISEGGEGH--RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-------RS- 188
Query: 254 FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF 313
TL H V T++ +P +L A+G D +V LWDL+ + N + ++ F
Sbjct: 189 -TLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSLEAN---SVIHALCF 243
Query: 314 SEDSPFVLAIGGSKGKLEIWD 334
S + ++ A ++ ++IWD
Sbjct: 244 SPNRYWLCA--ATEHGIKIWD 262
Score = 41 (19.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 65 GNFMAVGSMEPAIEIWDL 82
G F GS + + +WDL
Sbjct: 75 GQFALSGSWDGELRLWDL 92
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 151 (58.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 48/213 (22%), Positives = 93/213 (43%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H ++ L+++ I+ + S D V +WD + G+ TL H ++ + ++ +
Sbjct: 218 HLAEIISLSFDTSGDRII-TGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDC-SL 275
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+L+GS D++ ++ DA ++ +D + + DGT + ++
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFD-YTGKLIATASADGTARVYN--- 331
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
+T+++ L H+ + IS+NP N L TGS+DK ++WD+ Q C+
Sbjct: 332 ------ATTRKCITKLEGHEGEISKISFNPQ-GNRLLTGSSDKTARIWDVQTGQ--CLQV 382
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333
+FS AF+ V+ G IW
Sbjct: 383 LEGHTDEIFSCAFNYKGNIVIT-GSKDNSCRIW 414
Score = 151 (58.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 58/219 (26%), Positives = 101/219 (46%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + +A NK + + S D+ K+WD A+G+ TLE H + V A+A+N+
Sbjct: 91 HILPLTNVALNKA-GSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 181 LLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239
+ +GSFD++ + A + F+ A++ L+++P + S+ D T K +DI+
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFR-GHTAEIVCLSFNPQSTVVATGSM-DTTAKLWDIQ 207
Query: 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299
S + TL H + ++S++ ++ TGS D V +WD S + +
Sbjct: 208 ---------SGEEVVTLTGHLAEIISLSFDTSGDRII-TGSFDHTVVVWDASTGRK--VH 255
Query: 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKL-EIWDTLS 337
+ + S FS D +L GS K +WD S
Sbjct: 256 TLIGHCAEISSALFSWDCSLILT--GSMDKTCMLWDATS 292
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/214 (22%), Positives = 92/214 (42%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H + V +A+N + + +A+ S DK K+W GKC T HT ++ +++N S +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQST-V 191
Query: 181 LLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240
+ +GS D + + D + A++ SL++D + S D T+ +D T
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSF-DHTVVVWDAST 250
Query: 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300
+ TL H + + ++ +L+ TGS DK LWD ++ + C+A+
Sbjct: 251 GRK---------VHTLIGHCAEISSALFS-WDCSLILTGSMDKTCMLWDATSGK--CVAT 298
Query: 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
+ F + A + G +++
Sbjct: 299 LTGHDDEILDSCFDYTGKLI-ATASADGTARVYN 331
>ZFIN|ZDB-GENE-041111-211 [details] [associations]
symbol:wdfy2 "WD repeat and FYVE domain containing
2" species:7955 "Danio rerio" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR000306 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF01363 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00064 SMART:SM00320
ZFIN:ZDB-GENE-041111-211 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 GeneTree:ENSGT00670000098022 EMBL:CR533429
HOVERGEN:HBG054128 OMA:FVLEMEW CTD:115825 EMBL:AY394954
IPI:IPI00483648 RefSeq:NP_991308.1 UniGene:Dr.86865 STRING:Q6TLF1
Ensembl:ENSDART00000059209 GeneID:492636 KEGG:dre:492636
InParanoid:Q6TLF1 NextBio:20865169 Uniprot:Q6TLF1
Length = 400
Score = 115 (45.5 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 26/86 (30%), Positives = 46/86 (53%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN-LTLEHHTDKVQAVAWNHHSPQ 179
HT +V L W+ R +L S S+D + +WD+ K + L+ H DKVQ + + H+ Q
Sbjct: 198 HTGNVTALCWDPVQR-VLFSGSSDHSIIMWDIGGRKGTAIELQGHNDKVQGLCYAPHTRQ 256
Query: 180 ILLSGSFDRSVVMKDARISTHSGFKW 205
++ GS D +V+ + ++ +W
Sbjct: 257 LISCGS-DGGIVIWNMDVTRQETPEW 281
Score = 78 (32.5 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 236 FDIRTAKSDPDS-TSQQSSFTLHAHDK--AVCTISYNPLVPNLLATGSTDKMVKLWDLS 291
F++R S D T ++ + T HD ++ + Y P LL +G TDK++KLWD++
Sbjct: 339 FEVRVCDSCHDLITDEERAPTATFHDSKHSIVHMQYEPTRGWLLTSG-TDKVIKLWDMT 396
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 150 (57.9 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 58/215 (26%), Positives = 104/215 (48%)
Query: 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQI 180
H V + ++ F +++ SAS D +K+WD G TL+ HTD VQ ++++H + ++
Sbjct: 107 HRSPVTRVIFHPVF-SVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDH-TGKL 164
Query: 181 LLSGSFDRSVVMKDAR----ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236
L S S D ++ + D + I T G +V S+A P+ +H V + D TIK +
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDH----NVSSVAIMPNGDH-IVSASRDKTIKMW 219
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296
++ T +FT H + V + N L+A+ S D+ V++W ++ +
Sbjct: 220 EVATGYC-------VKTFT--GHREWVRMVRPNQ-DGTLIASSSNDQTVRVWVVATKE-- 267
Query: 297 CIASRNPKAGAVFSVAFSEDS--PFVLAIGGSKGK 329
C A V ++++ +S P +L GS+ K
Sbjct: 268 CKAELREHEHVVECISWAPESAHPTILEATGSETK 302
Score = 132 (51.5 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 50/208 (24%), Positives = 90/208 (43%)
Query: 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSV-VMKDAR 196
+ SAS DK +K+W+VA G C T H + V+ V N ++ S S D++V V A
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGT-LIASSSNDQTVRVWVVAT 265
Query: 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK-----GFDIRTAKSDP-----D 246
+ + VE ++W P + H ++ K G + + D D
Sbjct: 266 KECKAELREHEHV-VECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Query: 247 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAG 306
+ TL HD V + +P + + + DK +++WD N + C + +
Sbjct: 325 VSIGMCLMTLVGHDNWVRGVLVHP-GGKYIVSCADDKTLRIWDYKNKR--CTKTLSAHEH 381
Query: 307 AVFSVAFSEDSPFVLAIGGSKGKLEIWD 334
V S+ F + +P+V+ G +++W+
Sbjct: 382 FVTSLDFHKTAPYVVT-GSVDQTVKVWE 408
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 46/173 (26%), Positives = 81/173 (46%)
Query: 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHS--PQIL------------- 181
++AS+S D+ V++W VA +C L H V+ ++W S P IL
Sbjct: 248 LIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKP 307
Query: 182 ----LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGF 236
LSGS D+++ M D +S V D H ++VS +D T++ +
Sbjct: 308 GPFLLSGSRDKTIKMWD--VSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW 365
Query: 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289
D + +++ + TL AH+ V ++ ++ P ++ TGS D+ VK+W+
Sbjct: 366 DYK---------NKRCTKTLSAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWE 408
WARNING: HSPs involving 745 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 358 338 0.00094 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 995
No. of states in DFA: 620 (66 KB)
Total size of DFA: 263 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.15u 0.14s 27.29t Elapsed: 00:00:02
Total cpu time: 27.22u 0.14s 27.36t Elapsed: 00:00:02
Start: Sat May 11 05:36:16 2013 End: Sat May 11 05:36:18 2013
WARNINGS ISSUED: 2