Query 018293
Match_columns 358
No_of_seqs 645 out of 2009
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 12:58:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018293.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018293hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1.8E-49 6.2E-54 334.6 35.7 294 1-339 36-333 (344)
2 4g56_B MGC81050 protein; prote 100.0 6.4E-48 2.2E-52 327.6 33.6 299 1-345 48-351 (357)
3 1vyh_C Platelet-activating fac 100.0 5.7E-47 1.9E-51 327.9 33.5 278 1-336 114-410 (410)
4 1got_B GT-beta; complex (GTP-b 100.0 7.9E-45 2.7E-49 307.0 34.4 278 1-334 61-340 (340)
5 3iz6_a 40S ribosomal protein R 100.0 4.8E-45 1.7E-49 312.9 32.1 290 1-340 72-378 (380)
6 2ynn_A Coatomer subunit beta'; 100.0 1.9E-44 6.6E-49 299.8 33.3 281 1-338 19-303 (304)
7 3ow8_A WD repeat-containing pr 100.0 2.6E-44 8.8E-49 301.0 33.4 275 2-335 39-319 (321)
8 2pbi_B Guanine nucleotide-bind 100.0 7.9E-44 2.7E-48 302.2 36.7 282 1-334 70-354 (354)
9 2ynn_A Coatomer subunit beta'; 100.0 1.9E-44 6.3E-49 299.9 30.4 245 60-346 20-268 (304)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 5E-44 1.7E-48 302.6 33.3 301 1-343 22-341 (345)
11 3ow8_A WD repeat-containing pr 100.0 3E-43 1E-47 294.5 32.3 260 45-348 31-290 (321)
12 1vyh_C Platelet-activating fac 100.0 4E-43 1.4E-47 303.8 32.2 248 59-348 114-380 (410)
13 1erj_A Transcriptional repress 100.0 1E-42 3.4E-47 299.9 33.0 291 1-338 70-390 (393)
14 1nr0_A Actin interacting prote 100.0 1.3E-42 4.3E-47 315.6 35.0 285 1-342 24-360 (611)
15 2hes_X YDR267CP; beta-propelle 100.0 3.1E-42 1E-46 289.8 31.7 296 2-337 21-328 (330)
16 4gqb_B Methylosome protein 50; 100.0 4E-43 1.4E-47 295.9 24.8 253 58-341 35-293 (344)
17 4ery_A WD repeat-containing pr 100.0 1.1E-41 3.6E-46 284.6 32.4 278 1-336 29-311 (312)
18 3frx_A Guanine nucleotide-bind 100.0 2.4E-41 8.4E-46 283.0 32.9 277 1-338 23-318 (319)
19 4g56_B MGC81050 protein; prote 100.0 9.1E-43 3.1E-47 295.9 24.3 250 58-342 47-306 (357)
20 2xzm_R RACK1; ribosome, transl 100.0 1.3E-40 4.5E-45 281.5 35.6 281 4-339 35-342 (343)
21 2pm7_B Protein transport prote 100.0 4.9E-41 1.7E-45 278.4 31.9 246 60-337 16-285 (297)
22 1got_B GT-beta; complex (GTP-b 100.0 4.8E-41 1.6E-45 283.8 32.4 246 61-348 63-312 (340)
23 4aez_A CDC20, WD repeat-contai 100.0 1.1E-40 3.9E-45 288.0 33.5 288 3-348 99-391 (401)
24 2pm9_A Protein WEB1, protein t 100.0 1.1E-41 3.8E-46 295.9 26.3 292 1-342 18-342 (416)
25 3i2n_A WD repeat-containing pr 100.0 1.7E-40 5.7E-45 282.5 32.0 295 1-340 24-356 (357)
26 3k26_A Polycomb protein EED; W 100.0 6.4E-41 2.2E-45 286.0 29.4 292 1-337 24-366 (366)
27 2ymu_A WD-40 repeat protein; u 100.0 8.5E-41 2.9E-45 302.4 30.9 269 1-334 309-577 (577)
28 2pbi_B Guanine nucleotide-bind 100.0 3E-40 1E-44 280.2 31.9 254 48-348 66-326 (354)
29 2pm9_A Protein WEB1, protein t 100.0 2.8E-41 9.6E-46 293.3 24.7 298 1-338 73-415 (416)
30 3vl1_A 26S proteasome regulato 100.0 1.4E-40 4.7E-45 289.4 29.1 281 1-340 62-368 (420)
31 1erj_A Transcriptional repress 100.0 1.4E-39 4.7E-44 280.3 34.7 273 45-348 63-352 (393)
32 1gxr_A ESG1, transducin-like e 100.0 2.9E-39 1E-43 272.6 35.9 279 1-336 57-336 (337)
33 1nr0_A Actin interacting prote 100.0 1.4E-39 4.7E-44 295.7 36.3 290 1-340 65-400 (611)
34 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.2E-40 1.1E-44 279.3 29.8 244 60-339 23-285 (345)
35 2ymu_A WD-40 repeat protein; u 100.0 1.2E-39 4.2E-44 294.8 33.0 282 1-348 268-549 (577)
36 1k8k_C P40, ARP2/3 complex 41 100.0 9.1E-40 3.1E-44 279.6 29.6 286 1-342 14-366 (372)
37 1gxr_A ESG1, transducin-like e 100.0 5.6E-39 1.9E-43 270.8 32.8 285 1-342 15-301 (337)
38 3iz6_a 40S ribosomal protein R 100.0 2.6E-40 9E-45 283.5 24.6 246 61-344 74-336 (380)
39 3frx_A Guanine nucleotide-bind 100.0 6.7E-39 2.3E-43 268.2 32.4 242 62-343 26-273 (319)
40 3bg1_A Protein SEC13 homolog; 100.0 2.2E-40 7.6E-45 276.8 22.6 246 60-337 20-293 (316)
41 1sq9_A Antiviral protein SKI8; 100.0 2.2E-39 7.5E-44 279.8 29.4 282 1-339 22-397 (397)
42 2xyi_A Probable histone-bindin 100.0 2.6E-38 8.8E-43 275.6 36.4 265 42-338 124-411 (430)
43 4gga_A P55CDC, cell division c 100.0 3.9E-38 1.3E-42 273.8 36.9 281 2-343 112-401 (420)
44 2xzm_R RACK1; ribosome, transl 100.0 7.1E-39 2.4E-43 270.9 31.1 243 63-342 37-290 (343)
45 3ei3_B DNA damage-binding prot 100.0 6E-39 2.1E-43 275.7 31.1 282 1-337 79-382 (383)
46 4ery_A WD repeat-containing pr 100.0 1.6E-38 5.4E-43 265.4 32.2 245 61-348 31-279 (312)
47 1r5m_A SIR4-interacting protei 100.0 6.1E-39 2.1E-43 279.2 30.4 281 1-339 51-363 (425)
48 2j04_B YDR362CP, TAU91; beta p 100.0 9.4E-39 3.2E-43 282.2 30.3 261 48-338 209-518 (524)
49 4h5i_A Guanine nucleotide-exch 100.0 3E-38 1E-42 268.9 32.0 309 1-341 20-347 (365)
50 3zwl_B Eukaryotic translation 100.0 2.9E-38 1E-42 269.8 32.1 282 1-343 38-352 (369)
51 3dwl_C Actin-related protein 2 100.0 1.1E-39 3.9E-44 279.6 22.8 284 1-335 17-377 (377)
52 2hes_X YDR267CP; beta-propelle 100.0 1.8E-38 6.1E-43 266.9 28.8 239 62-339 23-282 (330)
53 3f3f_A Nucleoporin SEH1; struc 100.0 5.6E-38 1.9E-42 265.8 30.8 257 48-343 13-343 (351)
54 4aow_A Guanine nucleotide-bind 100.0 2E-37 6.8E-42 261.8 33.6 286 1-340 44-340 (340)
55 3odt_A Protein DOA1; ubiquitin 100.0 8.5E-38 2.9E-42 260.9 31.0 278 1-343 24-302 (313)
56 3jrp_A Fusion protein of prote 100.0 5.7E-38 1.9E-42 269.0 30.6 247 61-339 19-289 (379)
57 4e54_B DNA damage-binding prot 100.0 1.9E-38 6.7E-43 276.9 27.4 285 1-340 125-433 (435)
58 1r5m_A SIR4-interacting protei 100.0 2.7E-38 9.1E-43 275.1 28.0 291 1-336 114-424 (425)
59 3dm0_A Maltose-binding peripla 100.0 1.4E-37 4.8E-42 286.9 34.0 282 1-336 388-692 (694)
60 3vl1_A 26S proteasome regulato 100.0 6.8E-38 2.3E-42 272.4 28.3 280 2-337 104-419 (420)
61 4ggc_A P55CDC, cell division c 100.0 4.8E-36 1.6E-40 251.0 36.0 278 1-339 31-317 (318)
62 4a11_B DNA excision repair pro 100.0 3.1E-36 1.1E-40 260.8 35.6 273 47-343 44-371 (408)
63 3dwl_C Actin-related protein 2 100.0 2.5E-38 8.4E-43 271.3 21.8 245 60-336 18-280 (377)
64 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-37 6.9E-42 267.9 27.2 289 2-340 41-345 (402)
65 3mkq_A Coatomer beta'-subunit; 100.0 8.4E-37 2.9E-41 287.0 32.3 283 1-340 19-305 (814)
66 4e54_B DNA damage-binding prot 100.0 1.9E-37 6.5E-42 270.6 25.2 257 48-348 121-398 (435)
67 3dw8_B Serine/threonine-protei 100.0 2.6E-36 8.7E-41 264.6 32.0 308 1-335 34-444 (447)
68 3dm0_A Maltose-binding peripla 100.0 1.2E-36 4.3E-41 280.6 31.2 244 62-344 391-639 (694)
69 2aq5_A Coronin-1A; WD40 repeat 100.0 1.3E-36 4.6E-41 262.7 29.4 248 59-340 40-302 (402)
70 3gre_A Serine/threonine-protei 100.0 5.1E-37 1.8E-41 268.3 27.1 289 1-334 69-437 (437)
71 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-36 4.7E-41 265.3 28.8 273 2-343 138-420 (435)
72 2j04_B YDR362CP, TAU91; beta p 100.0 3E-37 1E-41 272.7 24.1 238 63-338 171-429 (524)
73 3dw8_B Serine/threonine-protei 100.0 5E-37 1.7E-41 269.1 25.1 254 60-341 35-377 (447)
74 3v7d_B Cell division control p 100.0 1.9E-36 6.6E-41 266.7 28.8 278 3-346 128-430 (464)
75 1k8k_C P40, ARP2/3 complex 41 100.0 3.8E-36 1.3E-40 257.1 29.4 243 62-337 17-274 (372)
76 1pgu_A Actin interacting prote 100.0 8.1E-36 2.8E-40 271.7 31.8 292 1-346 24-337 (615)
77 1sq9_A Antiviral protein SKI8; 100.0 4.2E-36 1.4E-40 259.2 28.2 253 47-345 17-330 (397)
78 3sfz_A APAF-1, apoptotic pepti 100.0 6.7E-36 2.3E-40 292.7 32.5 285 1-341 621-1038(1249)
79 1yfq_A Cell cycle arrest prote 100.0 1.5E-35 5.1E-40 250.6 30.0 277 1-334 17-321 (342)
80 3ei3_B DNA damage-binding prot 100.0 6.7E-36 2.3E-40 256.7 28.1 249 60-346 80-348 (383)
81 4gq1_A NUP37; propeller, trans 100.0 2.3E-36 7.9E-41 260.0 24.9 250 61-337 97-389 (393)
82 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.3E-35 7.9E-40 258.4 31.5 271 3-344 125-398 (445)
83 4aow_A Guanine nucleotide-bind 100.0 4.6E-35 1.6E-39 247.3 32.0 251 47-343 39-292 (340)
84 3mkq_A Coatomer beta'-subunit; 100.0 7.7E-36 2.6E-40 280.5 30.0 249 48-345 15-267 (814)
85 2pm7_B Protein transport prote 100.0 3.6E-35 1.2E-39 243.1 30.5 214 117-339 4-240 (297)
86 3gre_A Serine/threonine-protei 100.0 1.8E-36 6.2E-41 264.9 23.5 257 47-347 64-369 (437)
87 3jro_A Fusion protein of prote 100.0 4.5E-36 1.5E-40 278.4 27.2 249 60-340 16-288 (753)
88 3zwl_B Eukaryotic translation 100.0 2E-34 6.9E-39 246.0 35.2 250 47-347 33-314 (369)
89 3i2n_A WD repeat-containing pr 100.0 1.4E-35 4.9E-40 252.1 27.3 251 45-341 17-295 (357)
90 1yfq_A Cell cycle arrest prote 100.0 1.9E-35 6.4E-40 250.0 27.1 243 62-347 20-292 (342)
91 2oaj_A Protein SNI1; WD40 repe 100.0 4.6E-36 1.6E-40 282.1 23.4 301 1-339 64-521 (902)
92 3k26_A Polycomb protein EED; W 100.0 1.9E-35 6.5E-40 252.1 22.8 261 47-342 19-323 (366)
93 3bg1_A Protein SEC13 homolog; 100.0 3.6E-35 1.2E-39 245.2 23.7 244 1-291 19-292 (316)
94 3v7d_B Cell division control p 100.0 2.9E-34 9.8E-39 252.8 30.3 233 63-343 130-387 (464)
95 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7.7E-34 2.6E-38 249.0 32.5 239 59-338 108-392 (450)
96 4aez_A CDC20, WD repeat-contai 100.0 3.9E-34 1.3E-38 247.1 29.9 234 64-341 102-340 (401)
97 4a11_B DNA excision repair pro 100.0 9.1E-34 3.1E-38 245.3 32.2 290 1-337 49-405 (408)
98 3sfz_A APAF-1, apoptotic pepti 100.0 4.1E-35 1.4E-39 287.1 25.8 281 2-336 968-1248(1249)
99 3mmy_A MRNA export factor; mRN 100.0 4.7E-34 1.6E-38 243.6 28.9 281 1-340 45-349 (368)
100 1pgu_A Actin interacting prote 100.0 4.1E-34 1.4E-38 260.5 29.6 246 59-346 24-292 (615)
101 3odt_A Protein DOA1; ubiquitin 100.0 3.3E-34 1.1E-38 239.2 26.7 235 63-347 27-265 (313)
102 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.7E-34 2.3E-38 249.1 29.8 266 6-338 168-443 (445)
103 1p22_A F-BOX/WD-repeat protein 100.0 1.5E-33 5E-38 246.2 30.2 225 62-339 140-367 (435)
104 2xyi_A Probable histone-bindin 100.0 2.1E-33 7.2E-38 244.6 30.4 257 1-293 134-411 (430)
105 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-33 3.8E-38 239.1 26.0 235 60-341 43-296 (343)
106 3lrv_A PRE-mRNA-splicing facto 100.0 7E-33 2.4E-37 234.2 29.6 279 3-337 44-333 (343)
107 4gga_A P55CDC, cell division c 100.0 2.5E-32 8.6E-37 237.2 33.5 249 60-348 112-364 (420)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.5E-33 2.2E-37 243.1 30.0 208 118-338 98-342 (450)
109 3f3f_A Nucleoporin SEH1; struc 100.0 7.6E-33 2.6E-37 234.2 28.8 264 1-295 17-340 (351)
110 3vu4_A KMHSV2; beta-propeller 100.0 3.4E-32 1.2E-36 230.9 31.8 275 1-344 25-343 (355)
111 1l0q_A Surface layer protein; 100.0 3E-32 1E-36 234.6 31.8 278 8-346 3-284 (391)
112 3jrp_A Fusion protein of prote 100.0 4.8E-33 1.6E-37 238.4 26.7 213 116-339 5-242 (379)
113 2oaj_A Protein SNI1; WD40 repe 100.0 6.7E-33 2.3E-37 260.7 29.3 233 60-335 24-310 (902)
114 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-33 4E-38 244.4 21.7 195 120-336 83-296 (588)
115 3mmy_A MRNA export factor; mRN 100.0 1.5E-32 5E-37 234.3 27.3 254 46-347 39-314 (368)
116 3bws_A Protein LP49; two-domai 100.0 3.3E-32 1.1E-36 237.5 28.7 281 1-337 128-432 (433)
117 4h5i_A Guanine nucleotide-exch 100.0 1.4E-32 4.9E-37 233.8 25.3 193 59-293 139-344 (365)
118 3vu4_A KMHSV2; beta-propeller 100.0 3.8E-32 1.3E-36 230.6 26.5 235 60-339 26-273 (355)
119 4ggc_A P55CDC, cell division c 100.0 4E-31 1.4E-35 221.0 32.4 247 62-348 34-284 (318)
120 3bws_A Protein LP49; two-domai 100.0 6.7E-31 2.3E-35 229.3 31.1 247 59-344 128-397 (433)
121 2j04_A TAU60, YPL007P, hypothe 100.0 2.6E-32 8.9E-37 236.0 21.3 235 58-348 20-265 (588)
122 4gq1_A NUP37; propeller, trans 100.0 4.2E-32 1.5E-36 233.4 21.7 295 41-348 10-359 (393)
123 3jro_A Fusion protein of prote 100.0 4.1E-31 1.4E-35 245.2 26.6 212 117-339 4-240 (753)
124 2w18_A PALB2, fancn, partner a 100.0 1.1E-29 3.6E-34 206.7 26.4 184 135-335 145-355 (356)
125 1l0q_A Surface layer protein; 100.0 3.5E-29 1.2E-33 215.5 27.9 236 66-344 3-240 (391)
126 2w18_A PALB2, fancn, partner a 100.0 1.2E-28 4.1E-33 200.6 21.0 187 63-290 143-355 (356)
127 1nir_A Nitrite reductase; hemo 100.0 8.9E-27 3E-31 207.4 30.5 286 2-344 144-465 (543)
128 1nir_A Nitrite reductase; hemo 100.0 6.8E-27 2.3E-31 208.2 29.1 305 1-344 184-521 (543)
129 1ri6_A Putative isomerase YBHE 100.0 5.8E-26 2E-30 191.6 29.1 283 6-336 3-307 (343)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.5E-26 1.6E-30 197.0 28.8 230 65-344 143-393 (415)
131 3u4y_A Uncharacterized protein 100.0 9.3E-26 3.2E-30 189.6 29.8 282 3-339 5-306 (331)
132 2ecf_A Dipeptidyl peptidase IV 100.0 7.9E-26 2.7E-30 210.4 29.3 294 1-337 42-413 (741)
133 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.4E-24 4.6E-29 187.8 31.5 253 7-318 143-410 (415)
134 3hfq_A Uncharacterized protein 99.9 5.9E-24 2E-28 179.9 30.7 289 9-340 4-322 (347)
135 2z3z_A Dipeptidyl aminopeptida 99.9 2.1E-24 7.2E-29 199.7 28.9 291 1-339 87-437 (706)
136 3vgz_A Uncharacterized protein 99.9 3.3E-24 1.1E-28 181.7 27.8 280 1-326 46-334 (353)
137 2ojh_A Uncharacterized protein 99.9 5.8E-25 2E-29 181.5 21.7 255 21-327 21-293 (297)
138 3u4y_A Uncharacterized protein 99.9 6.1E-24 2.1E-28 178.5 25.6 244 61-340 5-255 (331)
139 2ojh_A Uncharacterized protein 99.9 7.6E-24 2.6E-28 174.7 25.3 228 70-340 17-261 (297)
140 1xfd_A DIP, dipeptidyl aminope 99.9 2.4E-24 8.3E-29 199.8 23.8 286 1-338 22-394 (723)
141 3vgz_A Uncharacterized protein 99.9 4E-24 1.4E-28 181.2 23.1 242 59-343 46-309 (353)
142 1pby_B Quinohemoprotein amine 99.9 1.9E-23 6.6E-28 175.7 25.9 278 8-345 2-318 (337)
143 2oit_A Nucleoporin 214KDA; NH2 99.9 2.5E-23 8.6E-28 180.4 26.6 210 1-241 42-279 (434)
144 3scy_A Hypothetical bacterial 99.9 3.1E-22 1.1E-26 170.2 32.9 289 4-340 10-342 (361)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 1.1E-23 3.8E-28 182.7 24.1 252 60-337 43-333 (434)
146 2ecf_A Dipeptidyl peptidase IV 99.9 5.6E-23 1.9E-27 191.2 27.9 292 1-338 114-460 (741)
147 1jmx_B Amine dehydrogenase; ox 99.9 7.1E-23 2.4E-27 173.2 24.9 249 58-344 4-332 (349)
148 1ri6_A Putative isomerase YBHE 99.9 2.3E-22 7.7E-27 169.6 27.8 269 1-317 43-334 (343)
149 1xfd_A DIP, dipeptidyl aminope 99.9 3.3E-22 1.1E-26 185.5 29.3 301 1-339 66-445 (723)
150 1k32_A Tricorn protease; prote 99.9 1.9E-22 6.5E-27 193.9 25.7 280 1-339 301-639 (1045)
151 2z3z_A Dipeptidyl aminopeptida 99.9 1.5E-21 5.3E-26 180.5 26.5 234 60-339 88-393 (706)
152 3o4h_A Acylamino-acid-releasin 99.9 2.3E-22 7.8E-27 181.9 19.6 231 58-341 26-278 (582)
153 1k32_A Tricorn protease; prote 99.9 3.2E-21 1.1E-25 185.5 28.5 277 2-340 251-603 (1045)
154 3o4h_A Acylamino-acid-releasin 99.9 1.1E-21 3.9E-26 177.3 22.7 269 1-337 27-315 (582)
155 3hfq_A Uncharacterized protein 99.9 4.5E-20 1.6E-24 155.9 30.5 259 1-295 45-322 (347)
156 1z68_A Fibroblast activation p 99.9 3E-22 1E-26 185.7 17.8 280 1-337 21-391 (719)
157 3pe7_A Oligogalacturonate lyas 99.9 3.4E-21 1.2E-25 165.4 22.2 282 2-337 42-382 (388)
158 1pby_B Quinohemoprotein amine 99.9 2.6E-21 8.9E-26 162.7 20.4 233 66-343 2-275 (337)
159 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.9E-20 9.9E-25 158.2 26.9 241 60-338 46-342 (365)
160 1z68_A Fibroblast activation p 99.9 1.9E-20 6.5E-25 173.6 27.6 296 1-341 65-447 (719)
161 3scy_A Hypothetical bacterial 99.9 8.1E-19 2.8E-23 149.1 31.1 279 1-314 55-360 (361)
162 1jmx_B Amine dehydrogenase; ox 99.9 2.3E-19 7.9E-24 151.6 23.9 237 1-295 5-328 (349)
163 3c5m_A Oligogalacturonate lyas 99.8 2.3E-19 8E-24 154.3 21.7 295 1-336 41-381 (396)
164 4a5s_A Dipeptidyl peptidase 4 99.8 1.5E-19 5.2E-24 167.7 20.4 246 58-340 21-356 (740)
165 3pe7_A Oligogalacturonate lyas 99.8 6.2E-19 2.1E-23 151.3 22.5 241 59-340 41-332 (388)
166 3fvz_A Peptidyl-glycine alpha- 99.8 1.6E-18 5.3E-23 145.3 23.9 237 58-337 28-322 (329)
167 1q7f_A NHL, brain tumor CG1071 99.8 8.2E-18 2.8E-22 138.1 27.1 241 59-340 35-283 (286)
168 2xdw_A Prolyl endopeptidase; a 99.8 2.8E-17 9.7E-22 151.9 30.7 290 4-339 80-416 (710)
169 2oiz_A Aromatic amine dehydrog 99.8 3E-17 1E-21 139.0 26.8 289 5-344 13-343 (361)
170 1jof_A Carboxy-CIS,CIS-muconat 99.8 2E-17 7E-22 140.6 25.3 241 1-293 45-342 (365)
171 2bkl_A Prolyl endopeptidase; m 99.8 2.3E-17 7.9E-22 152.0 26.7 287 3-339 75-399 (695)
172 4a5s_A Dipeptidyl peptidase 4 99.8 2.3E-17 8E-22 153.1 26.4 272 2-326 23-383 (740)
173 1rwi_B Serine/threonine-protei 99.8 7.5E-17 2.6E-21 131.1 24.8 240 58-341 28-268 (270)
174 2oiz_A Aromatic amine dehydrog 99.8 2.4E-16 8.3E-21 133.4 27.9 270 1-318 55-360 (361)
175 3azo_A Aminopeptidase; POP fam 99.8 9.8E-17 3.3E-21 147.3 24.9 199 121-339 128-371 (662)
176 3c5m_A Oligogalacturonate lyas 99.8 1.2E-17 4E-22 143.6 16.6 235 58-340 40-332 (396)
177 2dg1_A DRP35, lactonase; beta 99.8 1.8E-15 6.3E-20 126.8 28.5 226 60-326 51-300 (333)
178 2gop_A Trilobed protease; beta 99.8 6.1E-16 2.1E-20 130.5 25.0 256 6-336 23-330 (347)
179 3fvz_A Peptidyl-glycine alpha- 99.8 8.7E-16 3E-20 128.5 25.5 251 1-292 29-322 (329)
180 3e5z_A Putative gluconolactona 99.7 1.4E-15 4.6E-20 125.5 23.3 230 59-339 33-288 (296)
181 2dg1_A DRP35, lactonase; beta 99.7 2E-15 6.7E-20 126.7 24.5 239 58-342 10-267 (333)
182 3azo_A Aminopeptidase; POP fam 99.7 3E-16 1E-20 144.1 20.9 245 4-295 87-372 (662)
183 1q7f_A NHL, brain tumor CG1071 99.7 3.4E-15 1.1E-19 122.4 25.2 237 1-294 35-282 (286)
184 1qks_A Cytochrome CD1 nitrite 99.7 7.3E-15 2.5E-19 130.7 29.0 266 23-338 178-478 (567)
185 3dsm_A Uncharacterized protein 99.7 2.3E-15 7.7E-20 125.8 23.4 235 64-344 53-308 (328)
186 2z2n_A Virginiamycin B lyase; 99.7 8.6E-14 2.9E-18 114.6 31.7 274 2-338 21-296 (299)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.3E-14 4.6E-19 120.5 26.9 244 60-338 24-300 (314)
188 3no2_A Uncharacterized protein 99.7 1E-14 3.4E-19 118.5 24.1 213 63-324 3-230 (276)
189 2xdw_A Prolyl endopeptidase; a 99.7 2.6E-14 8.8E-19 132.2 29.4 246 2-294 131-416 (710)
190 2gop_A Trilobed protease; beta 99.7 5E-15 1.7E-19 124.9 22.4 187 123-339 59-293 (347)
191 1yr2_A Prolyl oligopeptidase; 99.7 2.2E-14 7.4E-19 133.2 27.6 289 3-339 114-443 (741)
192 2mad_H Methylamine dehydrogena 99.7 3.5E-13 1.2E-17 114.2 32.7 287 4-343 29-356 (373)
193 1rwi_B Serine/threonine-protei 99.7 1.5E-14 5.1E-19 117.5 23.0 236 2-294 30-266 (270)
194 1qks_A Cytochrome CD1 nitrite 99.7 1E-13 3.6E-18 123.3 28.6 237 62-337 164-421 (567)
195 3g4e_A Regucalcin; six bladed 99.7 1.7E-13 5.9E-18 112.8 26.0 227 61-327 20-263 (297)
196 3sjl_D Methylamine dehydrogena 99.7 5.1E-13 1.7E-17 111.8 28.5 293 3-344 40-370 (386)
197 2bkl_A Prolyl endopeptidase; m 99.6 3.7E-14 1.3E-18 130.7 22.9 247 2-296 127-401 (695)
198 2z2n_A Virginiamycin B lyase; 99.6 5.1E-13 1.7E-17 110.0 26.9 230 60-335 21-253 (299)
199 3hrp_A Uncharacterized protein 99.6 1.2E-13 4.1E-18 118.7 23.5 236 56-335 133-408 (409)
200 3e5z_A Putative gluconolactona 99.6 7.9E-14 2.7E-18 114.8 21.6 203 120-342 25-250 (296)
201 2qc5_A Streptogramin B lactona 99.6 1.5E-12 5.2E-17 107.2 29.4 272 2-336 26-299 (300)
202 3dsm_A Uncharacterized protein 99.6 1.9E-13 6.7E-18 114.1 23.1 229 71-342 13-258 (328)
203 1xip_A Nucleoporin NUP159; bet 99.6 6.1E-14 2.1E-18 117.8 17.4 172 124-322 39-230 (388)
204 3no2_A Uncharacterized protein 99.6 1.9E-13 6.4E-18 111.0 19.4 190 135-345 5-203 (276)
205 3c75_H MADH, methylamine dehyd 99.6 1.3E-12 4.4E-17 111.4 24.3 293 5-344 82-409 (426)
206 2qc5_A Streptogramin B lactona 99.6 8E-12 2.7E-16 102.8 27.7 231 60-335 26-258 (300)
207 3iuj_A Prolyl endopeptidase; h 99.6 7.5E-13 2.6E-17 121.8 23.5 237 59-339 134-407 (693)
208 1yr2_A Prolyl oligopeptidase; 99.6 2.3E-12 7.7E-17 119.7 26.7 243 2-294 169-443 (741)
209 2ghs_A AGR_C_1268P; regucalcin 99.6 4.9E-12 1.7E-16 105.5 26.0 226 59-328 54-294 (326)
210 1xip_A Nucleoporin NUP159; bet 99.6 2.7E-13 9.4E-18 113.9 18.0 176 60-278 44-230 (388)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 6.7E-12 2.3E-16 104.1 23.7 241 2-293 24-300 (314)
212 3iuj_A Prolyl endopeptidase; h 99.5 8.8E-12 3E-16 114.7 25.1 244 2-295 135-408 (693)
213 2mad_H Methylamine dehydrogena 99.5 1.1E-10 3.9E-15 98.8 28.4 245 1-295 71-353 (373)
214 3sjl_D Methylamine dehydrogena 99.5 3.6E-11 1.2E-15 100.7 24.6 265 1-316 83-384 (386)
215 3g4e_A Regucalcin; six bladed 99.5 5.8E-11 2E-15 97.7 24.8 208 121-344 11-236 (297)
216 3hrp_A Uncharacterized protein 99.4 2.7E-11 9.1E-16 104.1 22.4 200 123-339 131-356 (409)
217 2qe8_A Uncharacterized protein 99.4 1.5E-11 5.2E-16 103.3 19.8 247 58-331 21-315 (343)
218 1mda_H Methylamine dehydrogena 99.4 1.9E-11 6.6E-16 102.4 17.4 239 67-345 34-354 (368)
219 3dr2_A Exported gluconolactona 99.4 1.3E-10 4.4E-15 96.0 22.2 225 59-334 50-303 (305)
220 1npe_A Nidogen, entactin; glyc 99.4 9.1E-10 3.1E-14 89.0 25.1 207 123-344 36-245 (267)
221 3c75_H MADH, methylamine dehyd 99.4 7.9E-10 2.7E-14 94.3 25.5 248 1-295 123-405 (426)
222 2ece_A 462AA long hypothetical 99.4 5.6E-09 1.9E-13 88.2 29.5 236 60-324 88-399 (462)
223 2ghs_A AGR_C_1268P; regucalcin 99.3 1.3E-09 4.5E-14 90.7 25.7 199 124-342 50-264 (326)
224 2hz6_A Endoplasmic reticulum t 99.3 3.4E-13 1.2E-17 114.3 3.1 185 135-343 9-198 (369)
225 1yiq_A Quinohemoprotein alcoho 99.3 2.4E-10 8.3E-15 104.6 21.8 249 64-345 120-513 (689)
226 2qe8_A Uncharacterized protein 99.3 1E-09 3.6E-14 92.1 21.6 246 1-288 22-317 (343)
227 1kb0_A Quinohemoprotein alcoho 99.3 4.2E-10 1.4E-14 102.8 20.2 244 64-347 127-517 (677)
228 1fwx_A Nitrous oxide reductase 99.3 2.8E-10 9.5E-15 99.5 17.3 246 63-339 99-433 (595)
229 2hz6_A Endoplasmic reticulum t 99.3 2.7E-12 9.3E-17 108.8 4.6 204 64-318 8-216 (369)
230 2iwa_A Glutamine cyclotransfer 99.2 5E-09 1.7E-13 83.2 21.2 199 124-339 22-239 (266)
231 3dr2_A Exported gluconolactona 99.2 2.7E-09 9.4E-14 88.0 20.0 202 121-343 43-272 (305)
232 1ijq_A LDL receptor, low-densi 99.2 9.8E-08 3.3E-12 79.0 28.8 210 123-344 30-245 (316)
233 1npe_A Nidogen, entactin; glyc 99.2 8.4E-08 2.9E-12 77.4 27.7 218 60-318 42-263 (267)
234 1mda_H Methylamine dehydrogena 99.2 2.3E-09 7.9E-14 89.9 18.0 257 1-315 70-366 (368)
235 2ece_A 462AA long hypothetical 99.2 2.9E-09 9.9E-14 90.0 18.4 196 129-337 88-352 (462)
236 3q7m_A Lipoprotein YFGL, BAMB; 99.2 6.1E-08 2.1E-12 82.4 26.8 226 64-344 102-344 (376)
237 1yiq_A Quinohemoprotein alcoho 99.1 2.6E-08 8.7E-13 91.3 25.0 185 126-324 238-536 (689)
238 3v65_B Low-density lipoprotein 99.1 8.6E-08 2.9E-12 81.6 26.7 210 123-345 116-326 (386)
239 2fp8_A Strictosidine synthase; 99.1 6.4E-08 2.2E-12 80.4 24.9 255 60-338 25-314 (322)
240 3v64_C Agrin; beta propeller, 99.1 2.8E-07 9.7E-12 77.2 27.9 208 123-344 73-282 (349)
241 3q7m_A Lipoprotein YFGL, BAMB; 99.1 5.7E-08 2E-12 82.6 24.1 223 65-334 143-375 (376)
242 1kb0_A Quinohemoprotein alcoho 99.1 3.6E-08 1.2E-12 90.1 24.0 199 126-338 246-568 (677)
243 2iwa_A Glutamine cyclotransfer 99.1 1.6E-08 5.3E-13 80.3 18.4 191 61-293 28-238 (266)
244 1fwx_A Nitrous oxide reductase 99.1 1E-08 3.4E-13 89.8 18.7 254 68-337 18-361 (595)
245 3hxj_A Pyrrolo-quinoline quino 99.1 8E-09 2.7E-13 86.1 17.8 188 124-338 138-325 (330)
246 3p5b_L Low density lipoprotein 99.1 4.7E-07 1.6E-11 77.4 28.3 214 121-345 110-328 (400)
247 3nol_A Glutamine cyclotransfer 99.0 7.3E-08 2.5E-12 75.6 20.2 186 125-328 45-247 (262)
248 1kv9_A Type II quinohemoprotei 99.0 1.7E-08 5.6E-13 92.3 19.0 243 64-346 116-497 (668)
249 3nok_A Glutaminyl cyclase; bet 99.0 7.6E-08 2.6E-12 75.5 18.5 183 125-328 57-257 (268)
250 3qqz_A Putative uncharacterize 99.0 2.5E-06 8.4E-11 67.3 26.5 207 117-335 21-251 (255)
251 3hxj_A Pyrrolo-quinoline quino 99.0 3.6E-08 1.2E-12 82.1 16.6 180 137-342 109-288 (330)
252 3sov_A LRP-6, low-density lipo 99.0 1.6E-06 5.4E-11 71.6 26.1 210 123-345 35-246 (318)
253 1k3i_A Galactose oxidase precu 99.0 1.8E-07 6.2E-12 85.5 22.3 276 3-326 193-530 (656)
254 2p4o_A Hypothetical protein; p 98.9 1.4E-06 4.8E-11 71.7 25.4 223 60-325 38-277 (306)
255 3mbr_X Glutamine cyclotransfer 98.9 6.6E-07 2.3E-11 69.6 21.6 189 123-329 21-227 (243)
256 3m0c_C LDL receptor, low-densi 98.9 3.3E-06 1.1E-10 78.0 28.4 212 122-344 423-639 (791)
257 2xe4_A Oligopeptidase B; hydro 98.9 7.9E-07 2.7E-11 82.5 23.2 238 58-339 178-460 (751)
258 3nol_A Glutamine cyclotransfer 98.9 9.9E-08 3.4E-12 74.8 14.3 175 62-280 51-244 (262)
259 2ad6_A Methanol dehydrogenase 98.9 5.2E-07 1.8E-11 80.8 21.0 242 64-345 114-502 (571)
260 2xe4_A Oligopeptidase B; hydro 98.8 1E-05 3.6E-10 75.1 29.9 244 2-295 180-461 (751)
261 1w6s_A Methanol dehydrogenase 98.8 9.3E-07 3.2E-11 79.2 21.5 59 282-344 452-510 (599)
262 3v64_C Agrin; beta propeller, 98.8 5.6E-06 1.9E-10 69.4 25.1 198 125-337 36-234 (349)
263 1ijq_A LDL receptor, low-densi 98.8 9.6E-06 3.3E-10 66.9 25.4 182 144-337 9-195 (316)
264 1n7d_A LDL receptor, low-densi 98.8 5.6E-08 1.9E-12 89.0 12.8 211 123-344 406-621 (699)
265 4a2l_A BT_4663, two-component 98.8 5.5E-05 1.9E-09 70.9 32.6 197 122-339 262-482 (795)
266 1flg_A Protein (quinoprotein e 98.7 1.9E-05 6.5E-10 70.8 27.2 61 282-346 465-525 (582)
267 4a2l_A BT_4663, two-component 98.7 2.6E-05 9E-10 73.1 29.3 198 122-339 214-438 (795)
268 3nok_A Glutaminyl cyclase; bet 98.7 1.1E-06 3.6E-11 69.0 16.4 168 156-345 44-218 (268)
269 3mbr_X Glutamine cyclotransfer 98.7 1.1E-06 3.8E-11 68.3 16.4 173 65-280 31-223 (243)
270 1k3i_A Galactose oxidase precu 98.7 3.6E-07 1.2E-11 83.5 16.0 244 59-339 191-499 (656)
271 3v65_B Low-density lipoprotein 98.7 6.1E-06 2.1E-10 70.2 22.5 196 127-337 81-277 (386)
272 4a0p_A LRP6, LRP-6, low-densit 98.7 6.7E-05 2.3E-09 67.8 29.7 206 123-343 37-243 (628)
273 2fp8_A Strictosidine synthase; 98.7 3E-06 1E-10 70.2 19.7 198 123-341 19-272 (322)
274 3tc9_A Hypothetical hydrolase; 98.7 9.9E-06 3.4E-10 69.9 23.1 206 122-336 178-429 (430)
275 1kv9_A Type II quinohemoprotei 98.7 7.2E-06 2.5E-10 75.0 23.2 161 126-299 233-495 (668)
276 3amr_A 3-phytase; beta-propell 98.6 3.2E-05 1.1E-09 63.4 22.2 194 135-336 40-262 (355)
277 3p5b_L Low density lipoprotein 98.6 6.3E-05 2.2E-09 64.2 25.2 188 137-337 85-277 (400)
278 4hw6_A Hypothetical protein, I 98.6 3.5E-05 1.2E-09 66.4 23.7 205 122-336 181-432 (433)
279 2ad6_A Methanol dehydrogenase 98.6 4.5E-05 1.5E-09 68.3 24.2 165 146-324 273-525 (571)
280 3sov_A LRP-6, low-density lipo 98.5 7.4E-05 2.5E-09 61.6 23.4 182 144-337 12-197 (318)
281 3s94_A LRP-6, low-density lipo 98.5 7.5E-05 2.6E-09 67.4 24.7 209 122-343 39-249 (619)
282 2p4o_A Hypothetical protein; p 98.5 7.8E-05 2.7E-09 61.2 22.6 221 2-281 38-277 (306)
283 3kya_A Putative phosphatase; s 98.5 0.00016 5.4E-09 62.8 24.9 213 123-344 186-482 (496)
284 3qqz_A Putative uncharacterize 98.5 0.0001 3.5E-09 58.2 21.8 191 61-290 34-251 (255)
285 1flg_A Protein (quinoprotein e 98.5 0.0002 6.7E-09 64.3 26.0 164 145-322 291-545 (582)
286 4hw6_A Hypothetical protein, I 98.4 8.7E-05 3E-09 64.0 22.2 200 123-335 139-372 (433)
287 3v9f_A Two-component system se 98.4 0.00084 2.9E-08 62.8 30.3 197 121-338 311-525 (781)
288 3tc9_A Hypothetical hydrolase; 98.4 8.6E-05 2.9E-09 64.0 21.5 158 123-292 137-301 (430)
289 2p9w_A MAL S 1 allergenic prot 98.3 0.00037 1.3E-08 56.7 22.2 203 123-337 13-265 (334)
290 3m0c_C LDL receptor, low-densi 98.3 0.00034 1.2E-08 64.8 25.0 183 143-337 402-589 (791)
291 1n7d_A LDL receptor, low-densi 98.3 4.4E-06 1.5E-10 76.6 12.3 159 125-294 455-616 (699)
292 3v9f_A Two-component system se 98.3 0.0011 3.8E-08 61.9 28.6 201 122-339 257-480 (781)
293 3kya_A Putative phosphatase; s 98.3 0.00038 1.3E-08 60.4 22.5 218 124-346 140-417 (496)
294 2ism_A Putative oxidoreductase 98.2 0.00075 2.6E-08 56.5 22.9 237 58-324 35-332 (352)
295 3s94_A LRP-6, low-density lipo 98.2 0.0026 8.9E-08 57.5 26.8 203 123-338 349-552 (619)
296 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0019 6.5E-08 58.4 25.9 207 123-342 340-554 (628)
297 1w6s_A Methanol dehydrogenase 98.2 0.00029 9.8E-09 63.2 20.0 192 137-343 64-348 (599)
298 3amr_A 3-phytase; beta-propell 98.1 0.0022 7.4E-08 52.7 25.0 197 62-294 37-266 (355)
299 2vpj_A Kelch-like protein 12; 98.1 0.00072 2.5E-08 55.2 19.4 185 135-338 63-279 (301)
300 2g8s_A Glucose/sorbosone dehyd 98.0 0.0047 1.6E-07 51.7 25.7 246 58-330 22-347 (353)
301 3ii7_A Kelch-like protein 7; p 98.0 0.0017 5.7E-08 53.1 19.8 185 135-338 56-273 (306)
302 2p9w_A MAL S 1 allergenic prot 98.0 0.0012 4.2E-08 53.7 17.9 162 163-337 10-215 (334)
303 2xbg_A YCF48-like protein; pho 97.9 0.0031 1.1E-07 52.1 20.4 194 123-335 122-320 (327)
304 2xn4_A Kelch-like protein 2; s 97.9 0.0016 5.3E-08 53.2 18.5 186 135-339 62-278 (302)
305 2vpj_A Kelch-like protein 12; 97.9 0.0021 7.3E-08 52.3 18.8 145 135-295 113-281 (301)
306 1zgk_A Kelch-like ECH-associat 97.8 0.0034 1.2E-07 51.4 18.6 185 135-338 71-288 (308)
307 2xzh_A Clathrin heavy chain 1; 97.8 0.0092 3.1E-07 48.3 25.4 197 130-343 74-296 (365)
308 3ii7_A Kelch-like protein 7; p 97.7 0.0071 2.4E-07 49.4 19.2 148 135-298 102-278 (306)
309 4asc_A Kelch repeat and BTB do 97.7 0.008 2.7E-07 49.3 18.7 185 135-338 46-278 (315)
310 3sre_A PON1, serum paraoxonase 97.6 0.016 5.3E-07 48.2 19.0 141 186-337 81-252 (355)
311 3a9g_A Putative uncharacterize 97.6 0.026 9E-07 47.1 26.5 238 58-325 33-330 (354)
312 1bpo_A Protein (clathrin); cla 97.5 0.035 1.2E-06 46.9 25.8 198 129-343 72-295 (494)
313 1zgk_A Kelch-like ECH-associat 97.5 0.028 9.7E-07 45.8 20.2 148 135-298 122-293 (308)
314 3ei3_A DNA damage-binding prot 97.4 0.1 3.5E-06 50.8 32.6 208 23-272 533-748 (1158)
315 3pbp_A Nucleoporin NUP82; beta 97.4 0.014 4.9E-07 49.1 16.6 149 136-288 33-208 (452)
316 3sre_A PON1, serum paraoxonase 97.4 0.047 1.6E-06 45.4 22.8 185 124-325 51-285 (355)
317 2xbg_A YCF48-like protein; pho 97.3 0.047 1.6E-06 45.0 24.2 196 122-341 79-282 (327)
318 2xn4_A Kelch-like protein 2; s 97.3 0.047 1.6E-06 44.3 21.3 145 135-295 109-279 (302)
319 3das_A Putative oxidoreductase 97.3 0.061 2.1E-06 44.5 25.5 239 58-323 36-324 (347)
320 2woz_A Kelch repeat and BTB do 97.2 0.057 2E-06 44.2 18.4 185 135-338 57-288 (318)
321 3ei3_A DNA damage-binding prot 97.2 0.21 7.1E-06 48.7 27.6 176 145-337 807-999 (1158)
322 2xzh_A Clathrin heavy chain 1; 97.1 0.086 2.9E-06 42.8 29.4 242 62-342 75-337 (365)
323 1bpo_A Protein (clathrin); cla 97.1 0.11 3.9E-06 43.9 28.1 241 62-341 74-335 (494)
324 2uvk_A YJHT; unknown function, 97.1 0.038 1.3E-06 46.1 16.2 56 284-342 286-347 (357)
325 4asc_A Kelch repeat and BTB do 96.9 0.13 4.3E-06 42.0 20.1 101 135-241 99-222 (315)
326 1xi4_A Clathrin heavy chain; a 96.9 0.39 1.3E-05 47.2 25.6 242 62-341 74-335 (1630)
327 2uvk_A YJHT; unknown function, 96.7 0.21 7.2E-06 41.5 19.6 61 232-302 286-352 (357)
328 2ism_A Putative oxidoreductase 96.6 0.24 8.3E-06 41.2 21.7 206 123-339 31-299 (352)
329 3pbp_A Nucleoporin NUP82; beta 96.5 0.29 1E-05 41.3 21.2 143 187-333 40-208 (452)
330 1tl2_A L10, protein (tachylect 96.5 0.17 5.9E-06 38.5 17.1 178 135-330 4-203 (236)
331 2be1_A Serine/threonine-protei 96.5 0.0084 2.9E-07 49.4 7.6 193 136-342 11-236 (339)
332 1tl2_A L10, protein (tachylect 96.4 0.11 3.7E-06 39.6 12.6 101 124-234 42-157 (236)
333 1cru_A Protein (soluble quinop 96.4 0.4 1.4E-05 41.5 18.9 110 166-280 27-162 (454)
334 1cru_A Protein (soluble quinop 96.4 0.41 1.4E-05 41.4 27.2 58 274-331 370-430 (454)
335 3ott_A Two-component system se 96.4 0.63 2.2E-05 43.3 24.8 191 122-339 62-262 (758)
336 1xi4_A Clathrin heavy chain; a 96.4 0.53 1.8E-05 46.4 19.6 237 3-293 73-332 (1630)
337 2zwa_A Leucine carboxyl methyl 96.2 0.14 4.9E-06 47.0 15.0 197 135-339 398-637 (695)
338 2zwa_A Leucine carboxyl methyl 96.2 0.36 1.2E-05 44.3 17.5 154 135-295 452-638 (695)
339 2woz_A Kelch repeat and BTB do 96.2 0.41 1.4E-05 39.0 19.5 101 135-241 110-232 (318)
340 3das_A Putative oxidoreductase 95.7 0.75 2.6E-05 38.0 18.8 61 210-278 264-324 (347)
341 3s25_A Hypothetical 7-bladed b 95.6 0.73 2.5E-05 37.3 20.3 174 129-334 110-290 (302)
342 3ott_A Two-component system se 95.4 1.7 6E-05 40.3 25.7 185 124-333 104-303 (758)
343 3s25_A Hypothetical 7-bladed b 94.7 1.3 4.6E-05 35.7 18.5 161 145-337 88-255 (302)
344 3a9g_A Putative uncharacterize 94.4 1.9 6.4E-05 35.8 21.3 209 123-338 29-297 (354)
345 2g8s_A Glucose/sorbosone dehyd 94.2 2.1 7.1E-05 35.5 20.3 61 210-278 272-339 (353)
346 2be1_A Serine/threonine-protei 93.5 2.7 9.2E-05 34.6 17.8 104 135-242 111-233 (339)
347 3b7f_A Glycosyl hydrolase, BNR 93.0 3.6 0.00012 34.6 23.6 155 123-289 55-259 (394)
348 2wg3_C Hedgehog-interacting pr 92.4 5 0.00017 34.7 27.7 73 251-325 265-354 (463)
349 3b7f_A Glycosyl hydrolase, BNR 91.9 5.1 0.00017 33.6 20.9 99 136-236 23-143 (394)
350 2wg3_C Hedgehog-interacting pr 91.4 5.8 0.0002 34.3 13.7 112 209-327 14-159 (463)
351 1sqj_A OXG-RCBH, oligoxylogluc 90.9 10 0.00035 35.4 22.3 150 122-282 14-190 (789)
352 3qhy_B Beta-lactamase inhibito 90.6 5.5 0.00019 31.7 21.8 185 124-339 64-248 (282)
353 3sbq_A Nitrous-oxide reductase 89.6 10 0.00036 33.5 20.7 261 68-338 73-409 (638)
354 4gq2_M Nucleoporin NUP120; bet 88.7 11 0.00038 36.0 14.3 38 123-161 236-273 (950)
355 2cn3_A Xyloglucanase, beta-1,4 88.0 16 0.00056 33.7 22.3 106 124-230 24-153 (737)
356 1sqj_A OXG-RCBH, oligoxylogluc 88.0 16 0.00055 34.1 14.8 152 165-327 14-190 (789)
357 3sbq_A Nitrous-oxide reductase 83.7 23 0.00079 31.4 19.5 86 205-292 319-408 (638)
358 3uc1_A DNA gyrase subunit A; D 79.1 25 0.00084 28.7 19.7 153 64-241 108-280 (327)
359 4hvt_A Ritya.17583.B, post-pro 78.5 41 0.0014 30.9 20.7 103 229-336 318-429 (711)
360 2cn3_A Xyloglucanase, beta-1,4 78.2 43 0.0015 31.0 15.6 108 167-282 24-153 (737)
361 4gq2_M Nucleoporin NUP120; bet 77.1 17 0.0006 34.7 10.5 36 307-343 237-272 (950)
362 3q6k_A 43.2 kDa salivary prote 74.2 37 0.0013 28.3 22.6 174 122-325 151-342 (381)
363 4fhn_B Nucleoporin NUP120; pro 73.3 6.3 0.00021 38.6 6.6 38 124-162 239-276 (1139)
364 3a0f_A Xyloglucanase; beta-pro 67.1 81 0.0028 29.3 24.5 153 120-283 18-203 (763)
365 3f7f_A Nucleoporin NUP120; nuc 66.7 12 0.00042 34.1 6.4 31 63-93 229-259 (729)
366 1suu_A DNA gyrase subunit A; t 64.9 54 0.0018 26.5 27.6 206 63-292 6-231 (312)
367 3f7f_A Nucleoporin NUP120; nuc 63.9 14 0.00047 33.8 6.2 38 123-163 222-259 (729)
368 3qhy_B Beta-lactamase inhibito 63.8 53 0.0018 26.0 25.6 164 123-317 102-265 (282)
369 4fhn_B Nucleoporin NUP120; pro 61.9 22 0.00075 34.9 7.8 36 307-343 239-274 (1139)
370 3zwu_A Alkaline phosphatase PH 58.8 49 0.0017 29.6 8.7 59 263-323 478-548 (592)
371 3a0f_A Xyloglucanase; beta-pro 54.9 1.3E+02 0.0046 27.8 17.3 63 164-228 19-94 (763)
372 3no0_A DNA gyrase subunit A; D 54.7 77 0.0026 25.0 22.0 207 123-337 24-246 (276)
373 1suu_A DNA gyrase subunit A; t 53.3 87 0.003 25.2 23.8 195 135-337 8-231 (312)
374 3q6k_A 43.2 kDa salivary prote 52.7 1E+02 0.0035 25.8 15.1 57 146-202 124-195 (381)
375 4hvt_A Ritya.17583.B, post-pro 49.9 1.6E+02 0.0054 27.1 28.3 96 186-291 318-429 (711)
376 3l6v_A GYRA, DNA gyrase subuni 47.5 1.2E+02 0.0042 25.2 25.6 154 135-291 113-315 (370)
377 3uc1_A DNA gyrase subunit A; D 46.9 1.2E+02 0.0039 24.7 24.8 154 135-292 109-279 (327)
378 4a9v_A PHOX; hydrolase, beta-p 44.5 1.3E+02 0.0044 26.9 8.8 62 262-325 477-550 (592)
379 1zi0_A DNA gyrase subunit A; b 39.9 1.4E+02 0.0049 23.8 25.6 154 135-292 109-277 (307)
380 3l6v_A GYRA, DNA gyrase subuni 39.5 1.6E+02 0.0056 24.4 28.2 157 63-241 5-181 (370)
381 4a9v_A PHOX; hydrolase, beta-p 39.1 1.3E+02 0.0046 26.7 8.1 63 123-186 476-551 (592)
382 3no0_A DNA gyrase subunit A; D 38.7 1.4E+02 0.0049 23.4 19.5 163 122-292 67-246 (276)
383 2zux_A YESW protein; beta-prop 38.4 2.1E+02 0.0073 25.4 27.9 156 121-295 177-403 (591)
384 3zwu_A Alkaline phosphatase PH 37.8 1.3E+02 0.0043 27.0 7.9 59 124-183 477-548 (592)
385 1zi0_A DNA gyrase subunit A; b 36.7 1.6E+02 0.0056 23.5 27.7 249 63-337 1-277 (307)
386 3mwp_A Nucleoprotein; structur 32.8 13 0.00045 31.1 0.8 27 323-349 162-188 (577)
387 1q47_A Semaphorin 3A; beta pro 31.1 1.9E+02 0.0064 25.2 7.8 70 262-332 405-487 (495)
388 3nvq_A Semaphorin-7A; beta-pro 30.0 2.2E+02 0.0076 25.5 8.1 58 274-332 381-444 (590)
389 1ukf_A Avirulence protein AVRP 29.9 70 0.0024 23.4 4.1 36 304-339 117-152 (188)
390 4gz8_A Semaphorin-3A; multi-do 27.9 2.1E+02 0.007 26.2 7.7 58 274-332 430-495 (667)
391 3oky_B Putative uncharacterize 27.1 3.4E+02 0.011 24.2 9.5 70 262-332 404-495 (565)
392 1ukf_A Avirulence protein AVRP 25.8 90 0.0031 22.8 4.0 38 120-157 116-153 (188)
393 1wp5_A Topoisomerase IV; broke 25.1 2.7E+02 0.0093 22.5 26.9 245 63-337 3-277 (323)
394 2zuy_A YESX protein; beta-prop 22.9 4.2E+02 0.014 23.8 26.0 177 121-316 181-428 (620)
395 4gz8_A Semaphorin-3A; multi-do 22.9 1.5E+02 0.0051 27.0 5.9 63 222-287 430-495 (667)
396 1q47_A Semaphorin 3A; beta pro 20.6 3.4E+02 0.012 23.6 7.5 56 136-192 422-487 (495)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=334.58 Aligned_cols=294 Identities=20% Similarity=0.241 Sum_probs=232.6
Q ss_pred CcccCCCcEEEEEEecCCCc--eEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEE
Q 018293 1 MTINPNDAVIVCARNEDDVS--HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 78 (358)
++|+|+|++|+++. ++..+ ...+++|+........-...........+.++.| +|++ .|++|+.||.|+
T Consensus 36 ~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~d~-~l~~~s~dg~v~ 106 (344)
T 4gqb_B 36 ARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW-------VGER-GILVASDSGAVE 106 (344)
T ss_dssp EEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE-------ETTT-EEEEEETTSEEE
T ss_pred EEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE-------eCCC-eEEEEECCCEEE
Confidence 46999999998775 43222 1245555543211111111111112233445555 7775 688999999999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCcee
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN 158 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 158 (358)
|||+.+++.... ....+.+|.+.|++++|+|+ +++|++|+.|++|++||+++++++
T Consensus 107 lWd~~~~~~~~~-----------------------~~~~~~~H~~~V~~v~~spd-g~~l~sgs~d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 107 LWELDENETLIV-----------------------SKFCKYEHDDIVSTVSVLSS-GTQAVSGSKDICIKVWDLAQQVVL 162 (344)
T ss_dssp EEEECTTSSCEE-----------------------EEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEeccCCCceeE-----------------------eeccccCCCCCEEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEE
Confidence 999987654432 11234579999999999999 679999999999999999999999
Q ss_pred eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce--eeecCCeeeEEEcCCCCCeEEEEecCCeEEEE
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--WAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~ 236 (358)
..+.+|...|.+++|++++..+|++++.|++|++||+++++..... ..+...+.+++|+|++++++++|+.||.|++|
T Consensus 163 ~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~w 242 (344)
T 4gqb_B 163 SSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLV 242 (344)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEE
Confidence 9999999999999999998778999999999999999988765533 23456789999999888899999999999999
Q ss_pred EcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCC
Q 018293 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 316 (358)
Q Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 316 (358)
|++++ +++..+.+|...|++++|+|++..+|++|+.|++|++||+++++ +....+|.+.|++++|+|+
T Consensus 243 d~~~~---------~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~---~~~~~~H~~~V~~v~~sp~ 310 (344)
T 4gqb_B 243 DTKST---------SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE---LFRSQAHRDFVRDATWSPL 310 (344)
T ss_dssp ESCC-----------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE---EEEECCCSSCEEEEEECSS
T ss_pred ECCCC---------cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc---EEEEcCCCCCEEEEEEeCC
Confidence 99987 77889999999999999999986789999999999999999886 3456889999999999999
Q ss_pred CCeEEEEEccCCeEEEEEccCCC
Q 018293 317 SPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 317 ~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
++++|++++.||+|++|++.+..
T Consensus 311 ~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 311 NHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp STTEEEEEETTSCEEEEECCC--
T ss_pred CCeEEEEEcCCCeEEEEECCCCC
Confidence 98788999999999999998754
No 2
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.4e-48 Score=327.62 Aligned_cols=299 Identities=20% Similarity=0.255 Sum_probs=228.3
Q ss_pred CcccCCCcEEEEEEecCCCc--eEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEE
Q 018293 1 MTINPNDAVIVCARNEDDVS--HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 78 (358)
++|+|+|++|+++..+. .. ...+++|+...+................+.++.| +|++++| +++.||.|+
T Consensus 48 v~fSpDG~~las~s~d~-~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-------s~d~~~l-~~s~dg~v~ 118 (357)
T 4g56_B 48 VRYRRDGALLLAASSLS-SRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAW-------VSEKGIL-VASDSGAVE 118 (357)
T ss_dssp EEECSSSCEEEEEECSS-SSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEE-------ETTTEEE-EEETTSCEE
T ss_pred EEECCCCCEEEEEcCCC-CccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEE-------cCCCCEE-EEECCCEEE
Confidence 47999999999996532 11 2368888876542221111111122233446655 7888655 567799999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCcee
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN 158 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 158 (358)
|||+.+++.... ......+|...|++++|+|+ +++|++|+.|+.|++||+++++++
T Consensus 119 lWd~~~~~~~~~-----------------------~~~~~~~h~~~V~~v~~spd-g~~l~sgs~dg~v~iwd~~~~~~~ 174 (357)
T 4g56_B 119 LWEILEKESLLV-----------------------NKFAKYEHDDIVKTLSVFSD-GTQAVSGGKDFSVKVWDLSQKAVL 174 (357)
T ss_dssp EC--------CC-----------------------CCEEECCCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTTEEE
T ss_pred EeeccccceeEE-----------------------EeeccCCCCCCEEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEE
Confidence 999986543321 11233479999999999999 679999999999999999999999
Q ss_pred eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee--eecCCeeeEEEcCCCCCeEEEEecCCeEEEE
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW--AVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~ 236 (358)
..+.+|...|++++|++++..++++++.||.|++||+++++...... .+...+.+++|+|+++.++++|+.|+.|++|
T Consensus 175 ~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 175 KSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp EEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred EEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEE
Confidence 99999999999999999986789999999999999999887654332 3567799999999888899999999999999
Q ss_pred EcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcC-
Q 018293 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE- 315 (358)
Q Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~- 315 (358)
|++++ +....+..|...|++++|+|++..+|++|+.|++|+|||+++++. + ...+|...|++++|+|
T Consensus 255 d~~~~---------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~--~-~~~~H~~~V~~vafsP~ 322 (357)
T 4g56_B 255 NIKNP---------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV--F-RDLSHRDFVTGVAWSPL 322 (357)
T ss_dssp ESSCG---------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE--E-EECCCSSCEEEEEECSS
T ss_pred ECCCC---------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE--e-EECCCCCCEEEEEEeCC
Confidence 99987 778889999999999999999877899999999999999998863 3 3457999999999999
Q ss_pred CCCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 316 DSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 316 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
++. +|++++.||.|++|++.+.......+
T Consensus 323 d~~-~l~s~s~Dg~v~iW~~~~~~~~~~~i 351 (357)
T 4g56_B 323 DHS-KFTTVGWDHKVLHHHLPSEGRTENLI 351 (357)
T ss_dssp STT-EEEEEETTSCEEEEECC---------
T ss_pred CCC-EEEEEcCCCeEEEEECCCCCcccccc
Confidence 677 69999999999999997755544433
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.7e-47 Score=327.93 Aligned_cols=278 Identities=22% Similarity=0.374 Sum_probs=240.7
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|++++|++|..++ .+.+|+...+.....+..|. ..+.++.| +|++++|++|+.||+|++|
T Consensus 114 ~~~~p~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~~h~----~~V~~v~~-------~~~~~~l~sgs~D~~i~iw 177 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDA-----TIKVWDYETGDFERTLKGHT----DSVQDISF-------DHSGKLLASCSADMTIKLW 177 (410)
T ss_dssp EEECSSSSEEEEEESSS-----CEEEEETTTCCCCEEECCCS----SCEEEEEE-------CTTSSEEEEEETTSCCCEE
T ss_pred EEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEeccC----CcEEEEEE-------cCCCCEEEEEeCCCeEEEE
Confidence 46899999999998887 78888877654444444342 23345555 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
|+.+.+. ...+.+|...|.+++|+|+ +.+|++|+.|++|++||+++++++..
T Consensus 178 d~~~~~~---------------------------~~~~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~ 229 (410)
T 1vyh_C 178 DFQGFEC---------------------------IRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKT 229 (410)
T ss_dssp ETTSSCE---------------------------EECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eCCCCce---------------------------eEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 9975432 2345689999999999999 67999999999999999999999999
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCC-------------------C
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHA-------------------E 221 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------~ 221 (358)
+.+|...|.++.|+|++ .++++++.|+.|++||+++.+.......|...|.+++|+|++ +
T Consensus 230 ~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 308 (410)
T 1vyh_C 230 FTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG 308 (410)
T ss_dssp EECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------C
T ss_pred EeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCC
Confidence 99999999999999999 899999999999999999888777677888999999999953 4
Q ss_pred CeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEec
Q 018293 222 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR 301 (358)
Q Consensus 222 ~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 301 (358)
.++++|+.|+.|++||++++ ..+..+.+|...|.+++|+|++ .+|++|+.||.|++||+.+++ ++..+
T Consensus 309 ~~l~sgs~D~~i~iwd~~~~---------~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~~~--~~~~~ 376 (410)
T 1vyh_C 309 PFLLSGSRDKTIKMWDVSTG---------MCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKNKR--CMKTL 376 (410)
T ss_dssp CEEEEEETTSEEEEEETTTT---------EEEEEEECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTTSC--CCEEE
T ss_pred CEEEEEeCCCeEEEEECCCC---------ceEEEEECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc--eEEEE
Confidence 58999999999999999987 7788899999999999999998 899999999999999998887 45667
Q ss_pred CCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEcc
Q 018293 302 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 302 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
.+|...|++++|+|++++ |++|+.||.|++|+++
T Consensus 377 ~~h~~~v~~l~~~~~~~~-l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 377 NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410 (410)
T ss_dssp ECCSSCEEEEEECSSSSC-EEEEETTSEEEEEC--
T ss_pred cCCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEeCC
Confidence 789999999999999995 8999999999999863
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.9e-45 Score=306.98 Aligned_cols=278 Identities=18% Similarity=0.329 Sum_probs=231.9
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|++++|+++..++ .+.+|+...+.....+..| ...+.++.| +|++++|++|+.|+.|++|
T Consensus 61 ~~~s~d~~~l~s~s~Dg-----~v~iWd~~~~~~~~~~~~~----~~~v~~~~~-------s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 61 MHWGTDSRLLLSASQDG-----KLIIWDSYTTNKVHAIPLR----SSWVMTCAY-------APSGNYVACGGLDNICSIY 124 (340)
T ss_dssp EEECTTSSEEEEEETTT-----EEEEEETTTCCEEEEEECS----SSCEEEEEE-------CTTSSEEEEEETTCEEEEE
T ss_pred EEECCCCCEEEEEeCCC-----cEEEEECCCCCcceEeecC----CccEEEEEE-------CCCCCEEEEEeCCCeEEEE
Confidence 46899999999998887 8888887765322222222 223334444 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
++.+.+.. ......+.+|...|.++.|+++ + .+++++.|++|++||+++++++..
T Consensus 125 ~~~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~-~-~l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 125 NLKTREGN-----------------------VRVSRELAGHTGYLSCCRFLDD-N-QIVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp ETTTCSBS-----------------------CEEEEEEECCSSCEEEEEEEET-T-EEEEEETTSCEEEEETTTTEEEEE
T ss_pred ECccCCCc-----------------------ceeEEEecCCCccEEEEEECCC-C-cEEEEECCCcEEEEECCCCcEEEE
Confidence 99753321 1223345689999999999987 4 589999999999999999999999
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEccc
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~ 240 (358)
+.+|...|.+++|+|++ .++++++.|+.|++||++++........|...|.+++|+|+ +.++++|+.||.|++||++.
T Consensus 180 ~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFATGSDDATCRLFDLRA 257 (340)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTT
T ss_pred EcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCC-CCEEEEEcCCCcEEEEECCC
Confidence 99999999999999998 89999999999999999988877767778899999999995 56999999999999999987
Q ss_pred CCCCCCCCCCCccEEEee--cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCC
Q 018293 241 AKSDPDSTSQQSSFTLHA--HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP 318 (358)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 318 (358)
. ..+..+.. +...|.+++|+|++ .+|++|+.||.|++||+.+.+ ....+.+|...|.+++|+|++.
T Consensus 258 ~---------~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~s~dg~ 325 (340)
T 1got_B 258 D---------QELMTYSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALKAD--RAGVLAGHDNRVSCLGVTDDGM 325 (340)
T ss_dssp T---------EEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSS
T ss_pred C---------cEEEEEccCCcccceEEEEECCCC-CEEEEECCCCeEEEEEcccCc--EeeEeecCCCcEEEEEEcCCCC
Confidence 6 44444432 23579999999998 899999999999999999887 4666788999999999999999
Q ss_pred eEEEEEccCCeEEEEE
Q 018293 319 FVLAIGGSKGKLEIWD 334 (358)
Q Consensus 319 ~~l~~~~~dg~i~vw~ 334 (358)
+ |++|+.||.|++||
T Consensus 326 ~-l~s~s~D~~i~iWd 340 (340)
T 1got_B 326 A-VATGSWDSFLKIWN 340 (340)
T ss_dssp C-EEEEETTSCEEEEC
T ss_pred E-EEEEcCCccEEecC
Confidence 5 89999999999997
No 5
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.8e-45 Score=312.90 Aligned_cols=290 Identities=20% Similarity=0.304 Sum_probs=233.6
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.|++|..++ .+.+|+...+.....+..| ...+.++ +|+|+|++|++|+.|+.+++|
T Consensus 72 ~~~sp~~~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~h----~~~v~~~-------~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 72 LDWTPEKNWIVSASQDG-----RLIVWNALTSQKTHAIKLH----CPWVMEC-------AFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEECC----CTTCCCC-------EECTTSSEEEECCSSSCCEEE
T ss_pred EEEcCCCCEEEEEeCCC-----eEEEEECCCCccceEEecC----CCCEEEE-------EECCCCCEEEEeeCCCcEEEE
Confidence 47899999999998887 8888887764222222222 2223344 459999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
++.+..... ........+.+|.+.|.++.|+|+++..|++|+.|++|++||+.+++.+..
T Consensus 136 ~~~~~~~~~--------------------~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~ 195 (380)
T 3iz6_a 136 NLSSQADRD--------------------GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISI 195 (380)
T ss_dssp ECCCCSSCC--------------------CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEE
T ss_pred ECCCCcccc--------------------CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEE
Confidence 997532211 112334457789999999999998777899999999999999999988877
Q ss_pred e-----cccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC-CCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEE
Q 018293 161 L-----EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234 (358)
Q Consensus 161 ~-----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~ 234 (358)
+ .+|...|.+++|++.++.++++|+.|+.|++||++.. ........|...|.+++|+|+ +.++++|+.||.|+
T Consensus 196 ~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i~ 274 (380)
T 3iz6_a 196 FGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD-GQRFGTGSDDGTCR 274 (380)
T ss_dssp ECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT-SSEEEEECSSSCEE
T ss_pred eecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC-CCeEEEEcCCCeEE
Confidence 6 5788999999998854489999999999999999844 555556678999999999995 56999999999999
Q ss_pred EEEcccCCCCCCCCCCCccEEEeec-------CCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEec----CC
Q 018293 235 GFDIRTAKSDPDSTSQQSSFTLHAH-------DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR----NP 303 (358)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~ 303 (358)
+||++++ ..+..+..+ ...+++++|+|++ .+|++|+.||.|++||+..++. ...+ .+
T Consensus 275 lwd~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~~~~ 342 (380)
T 3iz6_a 275 LFDMRTG---------HQLQVYNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLAEM--VLNLGTLQNS 342 (380)
T ss_dssp EEETTTT---------EEEEEECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTCCE--EEEECCSCSS
T ss_pred EEECCCC---------cEEEEecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCCce--EEEEecccCC
Confidence 9999987 444444433 2348999999998 8999999999999999988873 3333 57
Q ss_pred CCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 304 KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 304 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
|.+.|.+++|+|+|+ .|++|+.||.|++|++...+.
T Consensus 343 h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 343 HEGRISCLGLSSDGS-ALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp CCCCCCEEEECSSSS-EEEEECTTSCEEEEECCSSSS
T ss_pred CCCceEEEEECCCCC-EEEEeeCCCCEEEEecCCCcc
Confidence 899999999999999 599999999999999987654
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.9e-44 Score=299.83 Aligned_cols=281 Identities=20% Similarity=0.246 Sum_probs=229.0
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.|+++..++ .+.+|+...+.....+..| .....++. |+|++++|++|+.|+.|++|
T Consensus 19 ~~fsp~~~~l~s~~~dg-----~v~lWd~~~~~~~~~~~~~----~~~v~~~~-------~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSG-----RVELWNYETQVEVRSIQVT----ETPVRAGK-------FIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp EEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECC----SSCEEEEE-------EEGGGTEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEEcCCC-----cEEEEECCCCceeEEeecc----CCcEEEEE-------EeCCCCEEEEECCCCEEEEE
Confidence 47999999999998887 8888888765222222222 22233444 48899999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC-ceee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG-KCNL 159 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~ 159 (358)
|+.+++.. ..+.+|...|.+++|+|+ +.+|++|+.|++|++||++++ ....
T Consensus 83 d~~~~~~~---------------------------~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~ 134 (304)
T 2ynn_A 83 NYNTGEKV---------------------------VDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQ 134 (304)
T ss_dssp ETTTCCEE---------------------------EEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEEGGGTTEEEE
T ss_pred ECCCCcEE---------------------------EEEeCCCCcEEEEEEcCC-CCEEEEECCCCeEEEEECCCCcchhh
Confidence 99764432 245579999999999999 679999999999999999887 4567
Q ss_pred eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-eecCCeeeEEEcCC-CCCeEEEEecCCeEEEEE
Q 018293 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPH-AEHSFVVSLEDGTIKGFD 237 (358)
Q Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~~~~dg~i~i~d 237 (358)
.+.+|...|.+++|+|.++..|++++.|+.|++||++......... .+...+..+.|+|. ++.++++++.|+.|++||
T Consensus 135 ~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (304)
T ss_dssp EECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEE
T ss_pred hhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEe
Confidence 7889999999999999655899999999999999998776554333 35578899999874 346899999999999999
Q ss_pred cccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCC
Q 018293 238 IRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDS 317 (358)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 317 (358)
++++ .++..+.+|...|.+++|+|++ .+|++|+.||.|++||+++.+ ....+..|...+.+++|+|++
T Consensus 215 ~~~~---------~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~ 282 (304)
T 2ynn_A 215 YQTK---------SCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK--VEKTLNVGLERSWCIATHPTG 282 (304)
T ss_dssp TTTT---------EEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC--EEEEECCSSSSEEEEEECTTC
T ss_pred CCCC---------ccceeeCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc--eeeeccCCCccEEEEEECCCC
Confidence 9987 7788999999999999999998 899999999999999999987 566778888999999999988
Q ss_pred Ce-EEEEEccCCeEEEEEccCC
Q 018293 318 PF-VLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 318 ~~-~l~~~~~dg~i~vw~~~~~ 338 (358)
.. ++++|+ +..+.+|++.+.
T Consensus 283 ~~~~~asg~-~~g~~~~~~~~~ 303 (304)
T 2ynn_A 283 RKNYIASGF-DNGFTVLSLGND 303 (304)
T ss_dssp GGGCEEEEE-TTEEEEEECC--
T ss_pred CceEEEEec-CCceEEEEeccC
Confidence 53 366665 555788887653
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-44 Score=300.99 Aligned_cols=275 Identities=21% Similarity=0.316 Sum_probs=227.6
Q ss_pred cccC----CCcEEEEEEecCCCceEEEEEEeccCCCCCc--eEeeceeecCCcccceeeecCCccccCCCceEEecCCCC
Q 018293 2 TINP----NDAVIVCARNEDDVSHLEVYILEESDGGDPN--LYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 75 (358)
Q Consensus 2 ~~~p----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg 75 (358)
+++| ++..|++|..++ .+.+|+...+.... .+..| ...+.++.| ++++.++++|+.|+
T Consensus 39 ~~~~~~~~~~~~l~tgs~D~-----~v~vW~~~~~~~~~~~~l~gh----~~~v~~~~~-------~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 39 AWGTNKKENSETVVTGSLDD-----LVKVWKWRDERLDLQWSLEGH----QLGVVSVDI-------SHTLPIAASSSLDA 102 (321)
T ss_dssp EEC-------CEEEEEETTS-----CEEEEEEETTEEEEEEEECCC----SSCEEEEEE-------CSSSSEEEEEETTS
T ss_pred EEecCCCCCCCEEEEEcCCC-----CEEEEECCCCCeeeeeeeccC----CCCEEEEEE-------CCCCCEEEEEeCCC
Confidence 4555 366888887665 44455543321000 11122 222334444 89999999999999
Q ss_pred eEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC
Q 018293 76 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 155 (358)
Q Consensus 76 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 155 (358)
.|++||+.+++... .+..|...+.+++|+|+ +++|++|+.||.|++||++++
T Consensus 103 ~i~lWd~~~~~~~~---------------------------~~~~~~~~~~~~~~spd-g~~l~~g~~dg~v~i~~~~~~ 154 (321)
T 3ow8_A 103 HIRLWDLENGKQIK---------------------------SIDAGPVDAWTLAFSPD-SQYLATGTHVGKVNIFGVESG 154 (321)
T ss_dssp EEEEEETTTTEEEE---------------------------EEECCTTCCCCEEECTT-SSEEEEECTTSEEEEEETTTC
T ss_pred cEEEEECCCCCEEE---------------------------EEeCCCccEEEEEECCC-CCEEEEEcCCCcEEEEEcCCC
Confidence 99999997644332 33457788999999999 679999999999999999999
Q ss_pred ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEE
Q 018293 156 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235 (358)
Q Consensus 156 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i 235 (358)
+....+..|...+.+++|+|++ ++|++++.||.|++||+++++.......+...|.+++|+|+ +.++++++.||.|++
T Consensus 155 ~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd-~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 155 KKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKI 232 (321)
T ss_dssp SEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTT-SCEEEEECTTSCEEE
T ss_pred ceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCC-CCEEEEEcCCCeEEE
Confidence 9999998899999999999999 89999999999999999988877666678899999999995 559999999999999
Q ss_pred EEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcC
Q 018293 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 315 (358)
Q Consensus 236 ~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 315 (358)
||++.. .....+.+|...|.+++|+|++ .+|++++.|+.|++||+++++ ++..+..|...|.+++|+|
T Consensus 233 wd~~~~---------~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~ 300 (321)
T 3ow8_A 233 YDVQHA---------NLAGTLSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRT--CVHTFFDHQDQVWGVKYNG 300 (321)
T ss_dssp EETTTC---------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECT
T ss_pred EECCCc---------ceeEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCE--EEEEEcCCCCcEEEEEECC
Confidence 999876 6778889999999999999998 899999999999999999887 6777889999999999999
Q ss_pred CCCeEEEEEccCCeEEEEEc
Q 018293 316 DSPFVLAIGGSKGKLEIWDT 335 (358)
Q Consensus 316 ~~~~~l~~~~~dg~i~vw~~ 335 (358)
+++ .|++++.||.|++||.
T Consensus 301 ~g~-~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 301 NGS-KIVSVGDDQEIHIYDC 319 (321)
T ss_dssp TSS-EEEEEETTCCEEEEEC
T ss_pred CCC-EEEEEeCCCeEEEEeC
Confidence 999 5899999999999996
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.9e-44 Score=302.24 Aligned_cols=282 Identities=16% Similarity=0.257 Sum_probs=231.5
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.|++|..++ .+.+|+...+........+ ...+.++ +|+|+|++|++|+.|+.+++|
T Consensus 70 ~~~s~d~~~l~s~s~Dg-----~v~vWd~~~~~~~~~~~~~----~~~v~~~-------~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 70 MDWCKDKRRIVSSSQDG-----KVIVWDSFTTNKEHAVTMP----CTWVMAC-------AYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp EEECTTSSEEEEEETTS-----EEEEEETTTCCEEEEEECS----SSCCCEE-------EECTTSSEEEEESTTSEEEEE
T ss_pred EEECCCCCEEEEEeCCC-----eEEEEECCCCCcceEEecC----CCCEEEE-------EECCCCCEEEEeeCCCCEEEE
Confidence 47899999999998887 8888887664222222111 2233344 448999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
++....... .......+.+|...|.+++|+|+ +..|++++.|++|++||+++++++..
T Consensus 134 ~~~~~~~~~---------------------~~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~s~D~~v~lwd~~~~~~~~~ 191 (354)
T 2pbi_B 134 PLTFDKNEN---------------------MAAKKKSVAMHTNYLSACSFTNS-DMQILTASGDGTCALWDVESGQLLQS 191 (354)
T ss_dssp ECCCCTTCC---------------------SGGGCEEEEECSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEecccccc---------------------ccccceeeeccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCeEEEE
Confidence 986432111 11222345579999999999999 67999999999999999999999999
Q ss_pred ecccccceeeEEEcCCC-CcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcc
Q 018293 161 LEHHTDKVQAVAWNHHS-PQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 239 (358)
+.+|...|.+++|+|+. +.+|++++.||.|++||+++++.......|...|.+++|+|+ +.++++++.|+.|++||++
T Consensus 192 ~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 192 FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETT
T ss_pred EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCC-CCEEEEEeCCCeEEEEECC
Confidence 99999999999998852 279999999999999999998877766778999999999995 4699999999999999998
Q ss_pred cCCCCCCCCCCCccEEEeec--CCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCC
Q 018293 240 TAKSDPDSTSQQSSFTLHAH--DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDS 317 (358)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~--~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 317 (358)
.. .....+..+ ...+.+++|+|++ .+|++|+.|+.|++||+.+++ .+..+.+|...|++++|+|++
T Consensus 271 ~~---------~~~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~--~~~~l~~h~~~v~~l~~spdg 338 (354)
T 2pbi_B 271 AD---------REVAIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLKGS--RVSILFGHENRVSTLRVSPDG 338 (354)
T ss_dssp TT---------EEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCS--EEEEECCCSSCEEEEEECTTS
T ss_pred CC---------cEEEEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCCCc--eEEEEECCCCcEEEEEECCCC
Confidence 76 334444332 3478999999998 899999999999999998887 466778999999999999999
Q ss_pred CeEEEEEccCCeEEEEE
Q 018293 318 PFVLAIGGSKGKLEIWD 334 (358)
Q Consensus 318 ~~~l~~~~~dg~i~vw~ 334 (358)
++ |++|+.||.|++|+
T Consensus 339 ~~-l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 339 TA-FCSGSWDHTLRVWA 354 (354)
T ss_dssp SC-EEEEETTSEEEEEC
T ss_pred CE-EEEEcCCCCEEecC
Confidence 95 89999999999996
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.9e-44 Score=299.93 Aligned_cols=245 Identities=20% Similarity=0.303 Sum_probs=213.2
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+|+|++++|++|+.||.|++||+.++... ..+..|...|.+++|+|+ +++|+
T Consensus 20 ~fsp~~~~l~s~~~dg~v~lWd~~~~~~~---------------------------~~~~~~~~~v~~~~~~~~-~~~l~ 71 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYSGRVELWNYETQVEV---------------------------RSIQVTETPVRAGKFIAR-KNWII 71 (304)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEE---------------------------EEEECCSSCEEEEEEEGG-GTEEE
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcee---------------------------EEeeccCCcEEEEEEeCC-CCEEE
Confidence 44999999999999999999999754332 244568999999999999 67999
Q ss_pred EEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc-cceeeecCCeeeEEEcC
Q 018293 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAVAADVESLAWDP 218 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~ 218 (358)
+|+.|++|++||+++++++..+.+|...|.+++|+|++ .++++++.|++|++||++++... .....|...|.+++|+|
T Consensus 72 s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred EECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECC
Confidence 99999999999999999999999999999999999999 89999999999999999877443 33556889999999999
Q ss_pred CCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecC--CCCcEEEEEeCCCcEEEEecCCCCc
Q 018293 219 HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNP--LVPNLLATGSTDKMVKLWDLSNNQP 295 (358)
Q Consensus 219 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~ 295 (358)
.++..+++|+.|+.|++||++.. .....+ ..|...+..+.|+| ++ .+|++|+.|+.|++||+++++
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~D~~i~iWd~~~~~- 219 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQS---------TPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKS- 219 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTCS---------SCSEEEECCCTTCEEEEEECCSTTC-CEEEEEETTSEEEEEETTTTE-
T ss_pred CCCCEEEEEeCCCeEEEEECCCC---------CccceeccCCcCcEEEEEEEEcCCC-CEEEEEcCCCeEEEEeCCCCc-
Confidence 77789999999999999999876 334444 45667899999987 44 799999999999999999887
Q ss_pred eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccc
Q 018293 296 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 296 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
++..+.+|...|.+++|+|+++ +|++|+.||.|++||+.+++.+..+-.
T Consensus 220 -~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 268 (304)
T 2ynn_A 220 -CVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLNV 268 (304)
T ss_dssp -EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred -cceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCCCceeeeccC
Confidence 6777889999999999999999 599999999999999999887765443
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5e-44 Score=302.58 Aligned_cols=301 Identities=22% Similarity=0.340 Sum_probs=226.4
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
|+|+|++++|+++..++ .+.+|+...+....... ........+.+++| +|++++|++|+.|+.|++|
T Consensus 22 l~~sp~g~~las~~~D~-----~i~iw~~~~~~~~~~~~-~~~~h~~~v~~~~~-------sp~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDR-----RIRIWGTEGDSWICKSV-LSEGHQRTVRKVAW-------SPCGNYLASASFDATTCIW 88 (345)
T ss_dssp EEECTTSSCEEEEETTS-----CEEEEEEETTEEEEEEE-ECSSCSSCEEEEEE-------CTTSSEEEEEETTSCEEEE
T ss_pred EEECCCCCEEEEEcCCC-----eEEEEEcCCCcceeeee-eccccCCcEEEEEE-------CCCCCEEEEEECCCcEEEE
Confidence 47999999999997776 66667665431000000 00112233345555 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC---ce
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG---KC 157 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~ 157 (358)
++.... ......+.+|...|.+++|+|+ +++|++|+.|++|++||+.++ ++
T Consensus 89 ~~~~~~-------------------------~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~ 142 (345)
T 3fm0_A 89 KKNQDD-------------------------FECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYEC 142 (345)
T ss_dssp EECCC--------------------------EEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTTSCEEE
T ss_pred EccCCC-------------------------eEEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCCCCeEE
Confidence 986422 1223456789999999999999 679999999999999999876 34
Q ss_pred eeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc--cceeeecCCeeeEEEcCCCCCeEEEEecCCeEEE
Q 018293 158 NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS--GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235 (358)
Q Consensus 158 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i 235 (358)
+..+.+|...|.+++|+|++ .+|++++.|+.|++||.+..+.. .....|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 143 ~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~-g~~l~s~s~D~~v~i 220 (345)
T 3fm0_A 143 VSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS-GQRLASCSDDRTVRI 220 (345)
T ss_dssp EEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEE
T ss_pred EEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCC-CCEEEEEeCCCeEEE
Confidence 56778899999999999999 89999999999999999876432 335568899999999995 569999999999999
Q ss_pred EEcccCCCCCCCC------CCCccEEEee-cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc-------eeeEec
Q 018293 236 FDIRTAKSDPDST------SQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-------SCIASR 301 (358)
Q Consensus 236 ~d~~~~~~~~~~~------~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~~~ 301 (358)
||........... ....+..+.+ |...|.+++|+|++ ..|++++.|+.|++|+...... ......
T Consensus 221 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~ 299 (345)
T 3fm0_A 221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLH 299 (345)
T ss_dssp EEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEET
T ss_pred eccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeec
Confidence 9986543211100 0112233433 78899999999998 7899999999999999876431 112234
Q ss_pred CCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 302 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 302 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
.+|...|++++|+|++..+||+|+.||.|++|++.+++.+.+
T Consensus 300 ~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 300 QAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp TSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred ccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 689999999999999865799999999999999998776543
No 11
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3e-43 Score=294.48 Aligned_cols=260 Identities=21% Similarity=0.328 Sum_probs=222.9
Q ss_pred cCCcccceeeecCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCccc
Q 018293 45 IPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS 124 (358)
Q Consensus 45 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 124 (358)
....+.+++|.+. -.+++++|++|+.|++|+||++.... ......+.+|...
T Consensus 31 H~~~V~~v~~~~~---~~~~~~~l~tgs~D~~v~vW~~~~~~-------------------------~~~~~~l~gh~~~ 82 (321)
T 3ow8_A 31 HDDAIWSVAWGTN---KKENSETVVTGSLDDLVKVWKWRDER-------------------------LDLQWSLEGHQLG 82 (321)
T ss_dssp SSSCEEEEEEC----------CEEEEEETTSCEEEEEEETTE-------------------------EEEEEEECCCSSC
T ss_pred CCCcEEEEEEecC---CCCCCCEEEEEcCCCCEEEEECCCCC-------------------------eeeeeeeccCCCC
Confidence 3445567777321 12357899999999999999986422 1223346689999
Q ss_pred EEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce
Q 018293 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 204 (358)
Q Consensus 125 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 204 (358)
|.+++|+++ +.++++++.|++|++||+++++.+..+..+...+.+++|+|++ ++|++++.||.+++||+++++.....
T Consensus 83 v~~~~~~~~-~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~ 160 (321)
T 3ow8_A 83 VVSVDISHT-LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSL 160 (321)
T ss_dssp EEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEE
T ss_pred EEEEEECCC-CCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEe
Confidence 999999999 6799999999999999999999999999899999999999999 89999999999999999988776666
Q ss_pred eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCc
Q 018293 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 284 (358)
Q Consensus 205 ~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 284 (358)
..+...+.+++|+|+ +.++++|+.||.|++||++++ +.+..+.+|..+|.+++|+|++ .+|++|+.|+.
T Consensus 161 ~~~~~~v~~~~~spd-g~~lasg~~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~l~~spd~-~~l~s~s~dg~ 229 (321)
T 3ow8_A 161 DTRGKFILSIAYSPD-GKYLASGAIDGIINIFDIATG---------KLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGY 229 (321)
T ss_dssp ECSSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCCCEEEECTTS-CEEEEECTTSC
T ss_pred cCCCceEEEEEECCC-CCEEEEEcCCCeEEEEECCCC---------cEEEEEcccCCceeEEEEcCCC-CEEEEEcCCCe
Confidence 677788999999995 569999999999999999987 7788889999999999999998 89999999999
Q ss_pred EEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccccC
Q 018293 285 VKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 285 i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
|++||+++.+ ....+.+|...|.+++|+|+++ .|++++.||.|++||+.+++++..+..+.
T Consensus 230 i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~h~ 290 (321)
T 3ow8_A 230 IKIYDVQHAN--LAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 290 (321)
T ss_dssp EEEEETTTCC--EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EEEEECCCcc--eeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEEcCCC
Confidence 9999999887 5667889999999999999999 48999999999999999998887765553
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4e-43 Score=303.80 Aligned_cols=248 Identities=23% Similarity=0.320 Sum_probs=221.6
Q ss_pred ccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEE
Q 018293 59 LKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 138 (358)
Q Consensus 59 ~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 138 (358)
++|+|++++|++|+.||.|+|||+.+++.. ..+.+|...|.+++|+|+ +.+|
T Consensus 114 ~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~---------------------------~~l~~h~~~V~~v~~~~~-~~~l 165 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDATIKVWDYETGDFE---------------------------RTLKGHTDSVQDISFDHS-GKLL 165 (410)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTCCCC---------------------------EEECCCSSCEEEEEECTT-SSEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEE---------------------------EEEeccCCcEEEEEEcCC-CCEE
Confidence 345899999999999999999999764432 345689999999999999 6799
Q ss_pred EEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcC
Q 018293 139 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDP 218 (358)
Q Consensus 139 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 218 (358)
++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .++++++.|+.|++||++++........|...+.++.++|
T Consensus 166 ~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244 (410)
T ss_dssp EEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC
Confidence 999999999999999999999999999999999999998 8999999999999999999887777778889999999999
Q ss_pred CCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC-------------------CcEEEEE
Q 018293 219 HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV-------------------PNLLATG 279 (358)
Q Consensus 219 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-------------------~~~l~~~ 279 (358)
+ +.++++|+.|+.|++||+++. .....+..|...|.+++|+|++ +.+|++|
T Consensus 245 ~-g~~l~s~s~D~~v~vwd~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg 314 (410)
T 1vyh_C 245 D-GTLIASCSNDQTVRVWVVATK---------ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314 (410)
T ss_dssp T-SSEEEEEETTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE
T ss_pred C-CCEEEEEcCCCeEEEEECCCC---------ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE
Confidence 5 569999999999999999887 6777889999999999999962 2689999
Q ss_pred eCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccccC
Q 018293 280 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 280 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
+.|+.|++||+++++ ++..+.+|...|.+++|+|++++ |++|+.||.|++||+.+++.+..+..|.
T Consensus 315 s~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~-l~s~s~D~~i~vwd~~~~~~~~~~~~h~ 380 (410)
T 1vyh_C 315 SRDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKF-ILSCADDKTLRVWDYKNKRCMKTLNAHE 380 (410)
T ss_dssp ETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSC-EEEEETTTEEEEECCTTSCCCEEEECCS
T ss_pred eCCCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCceEEEEcCCC
Confidence 999999999999887 56677889999999999999995 8899999999999999988877655443
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-42 Score=299.88 Aligned_cols=291 Identities=22% Similarity=0.326 Sum_probs=224.0
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeec--------------CCcccceeeecCCccccCCCc
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIII--------------PAFPLCMAWLDCPLKDREKGN 66 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~s~~~~ 66 (358)
++|+|+|++|+++. ++ .+.+|+...+.....+..+.... ...+.+ ++|+|+|+
T Consensus 70 v~fspdg~~la~g~-~~-----~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~-------v~~s~dg~ 136 (393)
T 1erj_A 70 VKFSNDGEYLATGC-NK-----TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRS-------VCFSPDGK 136 (393)
T ss_dssp EEECTTSSEEEEEC-BS-----CEEEEETTTCCEEEEECC-----------------CCCCBEEE-------EEECTTSS
T ss_pred EEECCCCCEEEEEc-CC-----cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEE-------EEECCCCC
Confidence 46899999999985 43 56677766542222221111100 001223 45599999
Q ss_pred eEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCe
Q 018293 67 FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ 146 (358)
Q Consensus 67 ~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 146 (358)
+|++|+.||.|+|||+.+++ ....+.+|...|.+++|+|+ +.+|++|+.|++
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~---------------------------~~~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~ 188 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRK---------------------------IVMILQGHEQDIYSLDYFPS-GDKLVSGSGDRT 188 (393)
T ss_dssp EEEEEETTSCEEEEETTTTE---------------------------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSE
T ss_pred EEEEEcCCCeEEEEECCCCc---------------------------EEEEEccCCCCEEEEEEcCC-CCEEEEecCCCc
Confidence 99999999999999997533 22345689999999999999 679999999999
Q ss_pred EEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce-------eeecCCeeeEEEcCC
Q 018293 147 VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-------WAVAADVESLAWDPH 219 (358)
Q Consensus 147 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~i~~~~~~~~ 219 (358)
|++||++++++...+. +...+.+++|+|..+.++++++.|+.|++||++++...... ..|...|.+++|+|+
T Consensus 189 v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 189 VRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred EEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 9999999998887776 56789999999943389999999999999999887654322 357788999999995
Q ss_pred CCCeEEEEecCCeEEEEEcccCCCCCC---CCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce
Q 018293 220 AEHSFVVSLEDGTIKGFDIRTAKSDPD---STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296 (358)
Q Consensus 220 ~~~~~~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 296 (358)
+.++++++.||.|++||++....... .........+.+|...|.+++|+|++ .+|++|+.|+.|++||+++++
T Consensus 268 -g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iwd~~~~~-- 343 (393)
T 1erj_A 268 -GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKSGN-- 343 (393)
T ss_dssp -SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG-CEEEEEETTSEEEEEETTTCC--
T ss_pred -CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC-CEEEEEeCCCeEEEEECCCCe--
Confidence 56899999999999999987532111 01123456778899999999999998 899999999999999999988
Q ss_pred eeEecCCCCceeEEEEEcC------CCCeEEEEEccCCeEEEEEccCC
Q 018293 297 CIASRNPKAGAVFSVAFSE------DSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 297 ~~~~~~~~~~~v~~~~~~~------~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
.+..+.+|...|.+++|++ ++. +|++|+.||.|++|++...
T Consensus 344 ~~~~l~~h~~~v~~v~~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 344 PLLMLQGHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEEEECCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEEEEC
T ss_pred EEEEECCCCCCEEEEEecCCcCcCCCCC-EEEEECCCCcEEECccccc
Confidence 4566778999999999986 566 6999999999999998653
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-42 Score=315.61 Aligned_cols=285 Identities=20% Similarity=0.317 Sum_probs=231.5
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+|+.|+++. .+ .+.+|+...+.....+..|... +.++ +|+|+|++||+|+.||+|+||
T Consensus 24 ~~~spdg~~l~~~~-~~-----~v~l~~~~~~~~~~~~~~h~~~----v~~~-------~~spdg~~lasg~~d~~v~lW 86 (611)
T 1nr0_A 24 LGNTPAGDKIQYCN-GT-----SVYTVPVGSLTDTEIYTEHSHQ----TTVA-------KTSPSGYYCASGDVHGNVRIW 86 (611)
T ss_dssp CEECTTSSEEEEEE-TT-----EEEEEETTCSSCCEEECCCSSC----EEEE-------EECTTSSEEEEEETTSEEEEE
T ss_pred EeeCCCCCEEEeCC-CC-----EEEEecCCCcccCeEecCCCCc----eEEE-------EECCCCcEEEEEeCCCCEEEe
Confidence 57999999999985 44 7888888765555555555322 2344 459999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcC----CeEEEEECCCCc
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD----KQVKIWDVAAGK 156 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~ 156 (358)
|+.+.+.. ....+.+|.+.|.+++|+|+ +.+|++++.+ +.|++|| .++
T Consensus 87 d~~~~~~~-------------------------~~~~~~~~~~~v~~v~fs~d-g~~l~~~~~~~~~~~~v~~wd--~~~ 138 (611)
T 1nr0_A 87 DTTQTTHI-------------------------LKTTIPVFSGPVKDISWDSE-SKRIAAVGEGRERFGHVFLFD--TGT 138 (611)
T ss_dssp ESSSTTCC-------------------------EEEEEECSSSCEEEEEECTT-SCEEEEEECCSSCSEEEEETT--TCC
T ss_pred ECCCCcce-------------------------eeEeecccCCceEEEEECCC-CCEEEEEECCCCceeEEEEee--CCC
Confidence 98643221 12244579999999999999 5688887765 4677777 566
Q ss_pred eeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEE
Q 018293 157 CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236 (358)
Q Consensus 157 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~ 236 (358)
....+.+|...|.+++|+|+++..|++++.|++|++||....+.......|...|.+++|+|+ +.++++++.|+.|++|
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd-g~~las~s~D~~i~lw 217 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD-GSLFASTGGDGTIVLY 217 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEE
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCC-CCEEEEEECCCcEEEE
Confidence 778889999999999999998557999999999999998877666666778999999999996 5599999999999999
Q ss_pred EcccCCCCCCCCCCCccEEEe-------ecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCcee------------
Q 018293 237 DIRTAKSDPDSTSQQSSFTLH-------AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC------------ 297 (358)
Q Consensus 237 d~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------------ 297 (358)
|+.++ .....+. +|...|.+++|+|++ .+|++++.|++|++||+++++...
T Consensus 218 d~~~g---------~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~ 287 (611)
T 1nr0_A 218 NGVDG---------TKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 287 (611)
T ss_dssp ETTTC---------CEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCE
T ss_pred ECCCC---------cEeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCCCCcccee
Confidence 99876 4444442 799999999999998 899999999999999998765321
Q ss_pred -----------------------------eEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 298 -----------------------------IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 298 -----------------------------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
...+.+|...|.+++|+|+|+ .|++++.|+.|++||+.+++...
T Consensus 288 ~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 288 LGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp EEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCceee
Confidence 223457899999999999999 58999999999999999876543
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-42 Score=289.84 Aligned_cols=296 Identities=18% Similarity=0.301 Sum_probs=210.5
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~ 81 (358)
+|+|+ +|+++..++ .+.+|+...+....+...........+.++.| +|++++|++|+.|+.|+|||
T Consensus 21 ~~s~~--~las~~~D~-----~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~-------sp~~~~las~s~D~~v~iw~ 86 (330)
T 2hes_X 21 DFSQG--ILATGSTDR-----KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW-------RPHTSLLAAGSFDSTVSIWA 86 (330)
T ss_dssp EEETT--EEEEEESSS-----CEEEEECSSSCCEEEEEECTTCCCSCEEEEEE-------CTTSSEEEEEETTSCEEEEE
T ss_pred ccCCC--EEEEEcCCC-----EEEEEEecCCCeEEEEEEecCCccCCEEEEEE-------CCCCCEEEEEeCCCcEEEEE
Confidence 56666 888887776 67777765431111111100002223345555 89999999999999999999
Q ss_pred cccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCC----Cce
Q 018293 82 LDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAA----GKC 157 (358)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~----~~~ 157 (358)
+....... ........+.+|...|.+++|+|+ +++|++|+.|++|++||+.. .++
T Consensus 87 ~~~~~~~~--------------------~~~~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~iwd~~~~~~~~~~ 145 (330)
T 2hes_X 87 KEESADRT--------------------FEMDLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWIWETDESGEEYEC 145 (330)
T ss_dssp C---------------------------CCCEEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEEEECCTTCCCCEE
T ss_pred cccCcCcc--------------------ccceeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEEEeccCCCCCeEE
Confidence 86321100 012234456789999999999999 67999999999999999943 256
Q ss_pred eeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC--CCccceeeecCCeeeEEEcCCC-CCeEEEEecCCeEE
Q 018293 158 NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS--THSGFKWAVAADVESLAWDPHA-EHSFVVSLEDGTIK 234 (358)
Q Consensus 158 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~dg~i~ 234 (358)
+..+.+|...|.+++|+|++ .+|++++.|++|++||.... +.......|...|.+++|+|++ ...+++++.|+.|+
T Consensus 146 ~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~ 224 (330)
T 2hes_X 146 ISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVR 224 (330)
T ss_dssp EEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEE
T ss_pred EEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEE
Confidence 77888999999999999998 89999999999999998765 3444456788999999999963 45799999999999
Q ss_pred EEEcccCCCCCCCCCCCccEEEee-cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceee-EecCCCCc-eeEEE
Q 018293 235 GFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI-ASRNPKAG-AVFSV 311 (358)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~-~v~~~ 311 (358)
+||++....... ........+.. |...|.+++|+++ .+|++++.||.|++||..+++.... .....|.. .|.++
T Consensus 225 iw~~~~~~~~~~-~~~~~~~~~~~~h~~~v~~v~~s~~--~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v 301 (330)
T 2hes_X 225 VWKYMGDDEDDQ-QEWVCEAILPDVHKRQVYNVAWGFN--GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVV 301 (330)
T ss_dssp EEEEEEECTTSC-EEEEEEEECCSCCSSCEEEEEECTT--SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEE
T ss_pred EEEecCCCcccc-ceeEEeeecccccccceEEEEEcCC--CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEE
Confidence 999986521100 00012223333 8899999999975 4799999999999999987642223 23456776 89999
Q ss_pred EEcC--CCCeEEEEEccCCeEEEEEccC
Q 018293 312 AFSE--DSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 312 ~~~~--~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
+|+| +++ +|++|+.||.|++|++.+
T Consensus 302 ~~~~~~~~~-~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 302 KWLELNGKT-ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEC-----C-CEEEEETTSEEEEEEC--
T ss_pred EEecCCCce-EEEEecCCCcEEEEEecc
Confidence 9999 677 599999999999999864
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4e-43 Score=295.91 Aligned_cols=253 Identities=21% Similarity=0.237 Sum_probs=203.1
Q ss_pred CccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcE
Q 018293 58 PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 137 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 137 (358)
+++|+|||++|++++ |+++++||........+. .............|...|.+++|+|+ + .
T Consensus 35 ~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~v~~~~~s~d-~-~ 95 (344)
T 4gqb_B 35 AARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPC----------------AAPNEGFCSAGVQTEAGVADLTWVGE-R-G 95 (344)
T ss_dssp EEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGG----------------GTTCGGGCSEEEEESSCEEEEEEETT-T-E
T ss_pred EEEECCCCCEEEEEe-CCceEEeeceeeeecccc----------------ccCCcceeeeeeccCCCEEEEEEeCC-C-e
Confidence 456799999999887 778888875321100000 00011111122346678999999998 4 6
Q ss_pred EEEEEcCCeEEEEECCCCceeeee----cccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeee
Q 018293 138 LASASADKQVKIWDVAAGKCNLTL----EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVES 213 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 213 (358)
|++|+.||+|++||+++++.+..+ .+|...|++++|+|++ ++|++++.|++|++||+++++.......|...|.+
T Consensus 96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~ 174 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTC 174 (344)
T ss_dssp EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEE
Confidence 889999999999999998765443 4799999999999999 89999999999999999998888777789999999
Q ss_pred EEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE--eecCCceeEEEecCCCCcEEEEEeCCCcEEEEecC
Q 018293 214 LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL--HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291 (358)
Q Consensus 214 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~ 291 (358)
++|+|++..++++++.|+.|++||++++ +....+ ..|...+.+++|+|++.++|++|+.||.|++||++
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCP---------KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSS---------SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred EEecCCCCCceeeecccccccccccccc---------ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 9999988788999999999999999987 444444 34566789999999877899999999999999999
Q ss_pred CCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcc
Q 018293 292 NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 292 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 341 (358)
+++ ++..+.+|...|++++|+|++..+|++|+.||+|+|||+.+++.+
T Consensus 246 ~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 246 STS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp C----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred CCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 988 466778899999999999998656999999999999999988754
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-41 Score=284.65 Aligned_cols=278 Identities=21% Similarity=0.357 Sum_probs=226.5
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.|+++..++ .+.+|+...+.....+..| ...+.++.| +|++++|++|+.||.|++|
T Consensus 29 ~~~s~~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 29 VKFSPNGEWLASSSADK-----LIKIWGAYDGKFEKTISGH----KLGISDVAW-------SSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCC----SSCEEEEEE-------CTTSSEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEeeCCC-----eEEEEeCCCcccchhhccC----CCceEEEEE-------cCCCCEEEEECCCCEEEEE
Confidence 46899999999998776 7788887665322222222 222345555 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
|+.+++.. ..+.+|...|.+++|+|+ +.+|++|+.|+.|++||+++++.+..
T Consensus 93 d~~~~~~~---------------------------~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 93 DVSSGKCL---------------------------KTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp ETTTCCEE---------------------------EEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred ECCCCcEE---------------------------EEEcCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 99754332 244579999999999999 67999999999999999999999999
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcc
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 239 (358)
+..|..+|.+++|+|++ .++++++.||.|++||+++++...... .+...+..++|+|+ +.++++++.||.|++||++
T Consensus 145 ~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~ 222 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYS 222 (312)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTT-SSEEEEEETTTEEEEEETT
T ss_pred ecCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCC-CCEEEEEcCCCeEEEEECC
Confidence 99999999999999998 899999999999999999876554332 34567899999995 4589999999999999999
Q ss_pred cCCCCCCCCCCCccEEEeecCCceeE--EEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCC
Q 018293 240 TAKSDPDSTSQQSSFTLHAHDKAVCT--ISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDS 317 (358)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~--i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 317 (358)
++ .....+.+|.....+ ..+++.++.+|++|+.||.|++||+++++ .+..+.+|...|.+++|+|++
T Consensus 223 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~p~~ 291 (312)
T 4ery_A 223 KG---------KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE--IVQKLQGHTDVVISTACHPTE 291 (312)
T ss_dssp TT---------EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC--EEEEECCCSSCEEEEEECSSS
T ss_pred CC---------cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch--hhhhhhccCCcEEEEeecCcC
Confidence 87 667777777654332 34444344899999999999999999887 567788999999999999999
Q ss_pred CeEEEEEc--cCCeEEEEEcc
Q 018293 318 PFVLAIGG--SKGKLEIWDTL 336 (358)
Q Consensus 318 ~~~l~~~~--~dg~i~vw~~~ 336 (358)
+ ++++++ .|+.|++|+..
T Consensus 292 ~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 292 N-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp S-EEEEEECTTTCCEEEEECC
T ss_pred C-ceEEEEccCCccEEEecCC
Confidence 9 477775 69999999864
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.4e-41 Score=282.97 Aligned_cols=277 Identities=17% Similarity=0.301 Sum_probs=217.7
Q ss_pred CcccCCC-cEEEEEEecCCCceEEEEEEeccCCCCC-----ceEeeceeecCCcccceeeecCCccccCCCceEEecCCC
Q 018293 1 MTINPND-AVIVCARNEDDVSHLEVYILEESDGGDP-----NLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME 74 (358)
Q Consensus 1 l~~~p~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 74 (358)
|+|+|++ ++|+++..++ .+.+|+....... ..+..| ...+.++. |+|++++|++|+.|
T Consensus 23 l~~~~~~~~~l~s~s~D~-----~v~~W~~~~~~~~~~~~~~~~~~h----~~~v~~~~-------~s~dg~~l~s~s~D 86 (319)
T 3frx_A 23 LATSAGQPNLLLSASRDK-----TLISWKLTGDDQKFGVPVRSFKGH----SHIVQDCT-------LTADGAYALSASWD 86 (319)
T ss_dssp EEECSSCTTEEEEEETTS-----EEEEEEEEEETTEEEEEEEEEECC----SSCEEEEE-------ECTTSSEEEEEETT
T ss_pred EEccCCCccEEEEecCCc-----cEEEecCCCCCccccccceEEeCC----cccEEEEE-------ECCCCCEEEEEeCC
Confidence 4688865 7888887665 5666655432110 111222 22333444 48999999999999
Q ss_pred CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCC
Q 018293 75 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAA 154 (358)
Q Consensus 75 g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 154 (358)
++|++||+.+++.. ..+.+|...|.+++|+|+ +.+|++|+.|++|++||++
T Consensus 87 ~~v~~wd~~~~~~~---------------------------~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~vwd~~- 137 (319)
T 3frx_A 87 KTLRLWDVATGETY---------------------------QRFVGHKSDVMSVDIDKK-ASMIISGSRDKTIKVWTIK- 137 (319)
T ss_dssp SEEEEEETTTTEEE---------------------------EEEECCSSCEEEEEECTT-SCEEEEEETTSCEEEEETT-
T ss_pred CEEEEEECCCCCee---------------------------EEEccCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECC-
Confidence 99999999764432 245579999999999999 6799999999999999986
Q ss_pred CceeeeecccccceeeEEEcCCC-----CcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEec
Q 018293 155 GKCNLTLEHHTDKVQAVAWNHHS-----PQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE 229 (358)
Q Consensus 155 ~~~~~~~~~~~~~v~~~~~~~~~-----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 229 (358)
++++..+.+|...|.++.|.|.. ...+++++.|+.|++||+++.+.......|...|.+++|+|+ +.++++++.
T Consensus 138 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~-g~~l~s~~~ 216 (319)
T 3frx_A 138 GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPD-GTLIASAGK 216 (319)
T ss_dssp SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTT-SSEEEEEET
T ss_pred CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCC-CCEEEEEeC
Confidence 56778888999999999999853 248999999999999999987766666778999999999995 569999999
Q ss_pred CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC-------
Q 018293 230 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN------- 302 (358)
Q Consensus 230 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------- 302 (358)
||.|++||+++. +.+..+.. ...|.+++|+|++ .+|++++. +.+++|++..... ...+.
T Consensus 217 dg~i~iwd~~~~---------~~~~~~~~-~~~v~~~~~sp~~-~~la~~~~-~~i~v~~~~~~~~--~~~~~~~~~~~~ 282 (319)
T 3frx_A 217 DGEIMLWNLAAK---------KAMYTLSA-QDEVFSLAFSPNR-YWLAAATA-TGIKVFSLDPQYL--VDDLRPEFAGYS 282 (319)
T ss_dssp TCEEEEEETTTT---------EEEEEEEC-CSCEEEEEECSSS-SEEEEEET-TEEEEEEETTEEE--EEEECCCCTTCC
T ss_pred CCeEEEEECCCC---------cEEEEecC-CCcEEEEEEcCCC-CEEEEEcC-CCcEEEEeCcCee--eeccCccccccc
Confidence 999999999986 56666654 4679999999998 78888775 4599999987652 22221
Q ss_pred -CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 303 -PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 303 -~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
.|...+.+++|+|+|++ |++|+.||.|++||+.++
T Consensus 283 ~~~~~~v~~~~~spdg~~-l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 283 KAAEPHAVSLAWSADGQT-LFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp GGGCCCEEEEEECTTSSE-EEEEETTSCEEEEEEEEC
T ss_pred cCcCcceeEEEECCCCCE-EEEeecCceEEEEEEeec
Confidence 23567899999999995 889999999999999764
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.1e-43 Score=295.94 Aligned_cols=250 Identities=20% Similarity=0.216 Sum_probs=201.1
Q ss_pred CccccCCCceEEecCC------CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecC
Q 018293 58 PLKDREKGNFMAVGSM------EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN 131 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 131 (358)
+++|||||++||+|+. |+.|++|+..++.... .......+|...|.+++|+
T Consensus 47 ~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~-----------------------~~~~~~~~~~~~V~~~~~s 103 (357)
T 4g56_B 47 AVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE-----------------------SLCTAGVQTEAGVTDVAWV 103 (357)
T ss_dssp EEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CG-----------------------GGCSEEEECSSCEEEEEEE
T ss_pred EEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcce-----------------------eEecccCCCCCCEEEEEEc
Confidence 3456999999999997 6788999876543222 1222334688999999999
Q ss_pred CCCCcEEEEEEcCCeEEEEECCCCceee----eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeee
Q 018293 132 KEFRNILASASADKQVKIWDVAAGKCNL----TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV 207 (358)
Q Consensus 132 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 207 (358)
|+ + .+++++.||+|++||+.+++... ...+|...|++++|+|++ ++|++++.|+.|++||+++++.......|
T Consensus 104 ~d-~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~~h 180 (357)
T 4g56_B 104 SE-K-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYNAH 180 (357)
T ss_dssp TT-T-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CC-C-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCC
Confidence 98 4 46678899999999999886543 234789999999999999 89999999999999999998877767778
Q ss_pred cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEE
Q 018293 208 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKL 287 (358)
Q Consensus 208 ~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i 287 (358)
...|.+++|+|++..++++++.||.|++||+++++. ........|...+.+++|+|+++.+|++|+.|+.|++
T Consensus 181 ~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~-------~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 181 SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP-------ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC-------BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred CCCEEEEEEccCCCceeeeeccCCceEEEECCCCce-------eeeeeeccccccccchhhhhcccceEEEeecccceeE
Confidence 999999999998877899999999999999998732 2222334567789999999987789999999999999
Q ss_pred EecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 288 WDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
||+++++ ....+..|...|++++|+|++..+|++|+.||+|+|||+.+++.+.
T Consensus 254 wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 254 VNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp EESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred EECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 9999887 4667788999999999999986569999999999999999887654
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.3e-40 Score=281.53 Aligned_cols=281 Identities=18% Similarity=0.273 Sum_probs=210.7
Q ss_pred cC-CCcEEEEEEecCCCceEEEEEEeccCCCCCceE---eeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEE
Q 018293 4 NP-NDAVIVCARNEDDVSHLEVYILEESDGGDPNLY---VHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79 (358)
Q Consensus 4 ~p-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~v 79 (358)
+| ++++|++|..++ .+.+|+.........+ ...-......+.++.| +|++.+|++|+.|++|++
T Consensus 35 ~~~d~~~l~sgs~D~-----~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~-------~~~~~~l~s~s~D~~v~l 102 (343)
T 2xzm_R 35 ENEDSPVLISGSRDK-----TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL-------SQENCFAISSSWDKTLRL 102 (343)
T ss_dssp TTCCCCEEEEEETTS-----CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE-------CSSTTEEEEEETTSEEEE
T ss_pred cCCCCCEEEEEcCCC-----EEEEEECCcCCcccccccccchhccCCCceEEEEE-------CCCCCEEEEEcCCCcEEE
Confidence 55 889999997775 5666665432211110 0000111223345544 899999999999999999
Q ss_pred EEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceee
Q 018293 80 WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL 159 (358)
Q Consensus 80 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 159 (358)
||+.+++.. ..+.+|...|.+++|+|+ +.+|++++.|++|++||+... ...
T Consensus 103 wd~~~~~~~---------------------------~~~~~h~~~v~~v~~sp~-~~~l~s~~~d~~i~~wd~~~~-~~~ 153 (343)
T 2xzm_R 103 WDLRTGTTY---------------------------KRFVGHQSEVYSVAFSPD-NRQILSAGAEREIKLWNILGE-CKF 153 (343)
T ss_dssp EETTSSCEE---------------------------EEEECCCSCEEEEEECSS-TTEEEEEETTSCEEEEESSSC-EEE
T ss_pred EECCCCcEE---------------------------EEEcCCCCcEEEEEECCC-CCEEEEEcCCCEEEEEeccCC-cee
Confidence 999754332 245579999999999999 679999999999999999743 333
Q ss_pred ee---cccccceeeEEEcCCCC---------cEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEE
Q 018293 160 TL---EHHTDKVQAVAWNHHSP---------QILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVS 227 (358)
Q Consensus 160 ~~---~~~~~~v~~~~~~~~~~---------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 227 (358)
.. ..|...|.+++|+|++. .++++++.|+.|++||.. .+.......|...|.+++|+|+ +.+|++|
T Consensus 154 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~-g~~l~sg 231 (343)
T 2xzm_R 154 SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPN-GKYIATG 231 (343)
T ss_dssp ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTT-SSEEEEE
T ss_pred eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCC-CCEEEEE
Confidence 22 36888999999999862 589999999999999943 3333345578889999999995 5599999
Q ss_pred ecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC-----
Q 018293 228 LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN----- 302 (358)
Q Consensus 228 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----- 302 (358)
+.||.|++||++... .....+ .+...|.+++|+|++ .+++++ .|+.|++||+.+.+...+..+.
T Consensus 232 s~dg~v~iwd~~~~~--------~~~~~~-~~~~~v~~v~~sp~~-~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~ 300 (343)
T 2xzm_R 232 GKDKKLLIWDILNLT--------YPQREF-DAGSTINQIAFNPKL-QWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPIT 300 (343)
T ss_dssp ETTCEEEEEESSCCS--------SCSEEE-ECSSCEEEEEECSSS-CEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGG
T ss_pred cCCCeEEEEECCCCc--------ccceee-cCCCcEEEEEECCCC-CEEEEE-CCCCEEEEEeCCCCCCceEEeecCcch
Confidence 999999999996541 233333 345679999999987 676654 5788999999887654433333
Q ss_pred ------CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 303 ------PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 303 ------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
+|...|.+++|+|+|++ |++|+.||.|++|++.+++
T Consensus 301 ~~~~~~~~~~~v~~~~~sp~g~~-l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 301 KAEGQKGKNPQCTSLAWNALGKK-LFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp GBTTBCCSCCCEEEEEECSSSCC-EEEEETTSEEEEEEEEEEE
T ss_pred hhhhhcCCCCceEEEEECCCCCe-EEEecCCceEEEEEEEccC
Confidence 67788999999999995 8899999999999997754
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.9e-41 Score=278.37 Aligned_cols=246 Identities=24% Similarity=0.344 Sum_probs=201.5
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCC-CCcEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE-FRNIL 138 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l 138 (358)
+|+|+|++||+|+.|++|+|||+.... ......+.+|.+.|.+++|+++ .+.+|
T Consensus 16 ~~s~~g~~las~s~D~~v~iw~~~~~~-------------------------~~~~~~l~gH~~~V~~v~~s~~~~g~~l 70 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDKTIKIFEVEGET-------------------------HKLIDTLTGHEGPVWRVDWAHPKFGTIL 70 (297)
T ss_dssp EECTTSSEEEEEETTSCEEEEEBCSSC-------------------------BCCCEEECCCSSCEEEEEECCGGGCSEE
T ss_pred EECCCCCEEEEEeCCCEEEEEecCCCC-------------------------cEEEEEEccccCCeEEEEecCCCcCCEE
Confidence 448999999999999999999986321 1233456789999999999864 25799
Q ss_pred EEEEcCCeEEEEECCCCc--eeeeecccccceeeEEEcCC--CCcEEEEEeCCCcEEEEEcccCCC--ccceeeecCCee
Q 018293 139 ASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTH--SGFKWAVAADVE 212 (358)
Q Consensus 139 ~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~i~ 212 (358)
++|+.|++|++||+++++ .+..+..|...|.+++|+|+ + .+|++++.|+.|++||++.... ......|...+.
T Consensus 71 ~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~ 149 (297)
T 2pm7_B 71 ASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (297)
T ss_dssp EEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEE
T ss_pred EEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCceeeeeeecccCccc
Confidence 999999999999998874 55677889999999999997 5 7999999999999999987642 233456888999
Q ss_pred eEEEcCCC------------CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC--CcEEEE
Q 018293 213 SLAWDPHA------------EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV--PNLLAT 278 (358)
Q Consensus 213 ~~~~~~~~------------~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~l~~ 278 (358)
+++|+|+. +.+|++|+.|+.|++||++..... ......+.+|...|.+++|+|++ +.+|++
T Consensus 150 ~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~-----~~~~~~l~~H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-----YVLESTLEGHSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE-----EEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce-----EEEEEEecCCCCceEEEEECCCCCCceEEEE
Confidence 99999963 468999999999999999875210 01456788999999999999985 479999
Q ss_pred EeCCCcEEEEecCCCCce-eeEec--CCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 279 GSTDKMVKLWDLSNNQPS-CIASR--NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 279 ~~~dg~i~i~d~~~~~~~-~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
++.|++|++||+++.... ....+ ..|...|.+++|+|++++ |++++.||.|++|+...
T Consensus 225 ~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL 285 (297)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEETTSCEEEEEECT
T ss_pred EECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCE-EEEEcCCCcEEEEEECC
Confidence 999999999999875321 12222 567889999999999995 89999999999999863
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.8e-41 Score=283.81 Aligned_cols=246 Identities=21% Similarity=0.277 Sum_probs=211.8
Q ss_pred ccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEE
Q 018293 61 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 140 (358)
Q Consensus 61 ~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 140 (358)
|+|++++|++|+.||.|+|||+.+++.. ..+..|...|.+++|+|+ +.+|++
T Consensus 63 ~s~d~~~l~s~s~Dg~v~iWd~~~~~~~---------------------------~~~~~~~~~v~~~~~s~~-~~~l~s 114 (340)
T 1got_B 63 WGTDSRLLLSASQDGKLIIWDSYTTNKV---------------------------HAIPLRSSWVMTCAYAPS-GNYVAC 114 (340)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEE---------------------------EEEECSSSCEEEEEECTT-SSEEEE
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCCcc---------------------------eEeecCCccEEEEEECCC-CCEEEE
Confidence 4899999999999999999998754432 234468899999999999 679999
Q ss_pred EEcCCeEEEEECCCC----ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEE
Q 018293 141 ASADKQVKIWDVAAG----KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAW 216 (358)
Q Consensus 141 ~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 216 (358)
|+.|+.|++||+.+. +....+.+|...|.++.|++++ .+++++.|+.|++||+++++.......|...|.+++|
T Consensus 115 ~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 192 (340)
T 1got_B 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSL 192 (340)
T ss_dssp EETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEE
Confidence 999999999999875 3456778899999999999886 4899999999999999988877766778899999999
Q ss_pred cCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce
Q 018293 217 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 296 (358)
+|+ +.++++|+.||.|++||++++ .....+.+|...|++++|+|++ .+|++|+.||.|++||+++.+..
T Consensus 193 ~~~-~~~l~sg~~d~~v~~wd~~~~---------~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 193 APD-TRLFVSGACDASAKLWDVREG---------MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp CTT-SSEEEEEETTSCEEEEETTTC---------SEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE
T ss_pred CCC-CCEEEEEeCCCcEEEEECCCC---------eeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCcEE
Confidence 995 569999999999999999987 7778889999999999999998 89999999999999999988754
Q ss_pred eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccccC
Q 018293 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 297 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
.......+...|.+++|+|+++ +|++|+.||.|++||+.+++.+..+.+|.
T Consensus 262 ~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~~~~h~ 312 (340)
T 1got_B 262 MTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKADRAGVLAGHD 312 (340)
T ss_dssp EEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccCcEeeEeecCC
Confidence 4433344556799999999999 58899999999999999888776655443
No 23
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-40 Score=288.04 Aligned_cols=288 Identities=22% Similarity=0.336 Sum_probs=229.1
Q ss_pred ccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEEc
Q 018293 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDL 82 (358)
Q Consensus 3 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~ 82 (358)
+.+++..++++..++ .+++|+...+........ .....+.++.| +|++++|++|+.||.|++||+
T Consensus 99 ~~~s~~~l~~~~~d~-----~v~lw~~~~~~~~~~~~~---~~~~~v~~v~~-------s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 99 LDWSNLNVVAVALER-----NVYVWNADSGSVSALAET---DESTYVASVKW-------SHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp EEECTTSEEEEEETT-----EEEEEETTTCCEEEEEEC---CTTCCEEEEEE-------CTTSSEEEEEETTSCEEEEET
T ss_pred EeecCCCEEEEECCC-----eEEEeeCCCCcEeEeeec---CCCCCEEEEEE-------CCCCCEEEEECCCCeEEEEEC
Confidence 344456677777777 899999877632222221 12344556666 899999999999999999999
Q ss_pred ccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECC-CCceeeee
Q 018293 83 DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA-AGKCNLTL 161 (358)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~ 161 (358)
.+++.. ..+.+|...|.+++|+ +.++++|+.||.|++||++ ....+..+
T Consensus 164 ~~~~~~---------------------------~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 213 (401)
T 4aez_A 164 ESQTKL---------------------------RTMAGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTL 213 (401)
T ss_dssp TTCCEE---------------------------EEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred cCCeEE---------------------------EEecCCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEE
Confidence 754322 2445799999999995 4599999999999999998 55678888
Q ss_pred cccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEe--cCCeEEEEEcc
Q 018293 162 EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSL--EDGTIKGFDIR 239 (358)
Q Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~dg~i~i~d~~ 239 (358)
.+|...|.+++|+|++ .++++++.|+.|++||+++.+.......+...|.+++|+|++..++++++ .|+.|++||++
T Consensus 214 ~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 214 QGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp ECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT
T ss_pred cCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC
Confidence 8999999999999998 89999999999999999988777666678899999999998888888876 79999999999
Q ss_pred cCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEE--EeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCC
Q 018293 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLAT--GSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDS 317 (358)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 317 (358)
++ .....+. +...+.+++|+|++ .++++ |+.||.|++||+.+++......+.+|...|.+++|+|++
T Consensus 293 ~~---------~~~~~~~-~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg 361 (401)
T 4aez_A 293 TG---------ARVNTVD-AGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG 361 (401)
T ss_dssp TC---------CEEEEEE-CSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTS
T ss_pred CC---------CEEEEEe-CCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCC
Confidence 86 5555554 66789999999998 77777 448999999999997766666778899999999999999
Q ss_pred CeEEEEEccCCeEEEEEccCCCccccccccC
Q 018293 318 PFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 318 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
+ .|++++.||.|++|++.+++.+.+.....
T Consensus 362 ~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~ 391 (401)
T 4aez_A 362 R-ILSTAASDENLKFWRVYDGDHVKRPIPIT 391 (401)
T ss_dssp S-EEEEECTTSEEEEEECCC-----------
T ss_pred C-EEEEEeCCCcEEEEECCCCcccccccccc
Confidence 9 58999999999999999998887655443
No 24
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-41 Score=295.88 Aligned_cols=292 Identities=16% Similarity=0.268 Sum_probs=232.8
Q ss_pred CcccCCCc-EEEEE----------EecCCCceEEEEEEeccCCCC--CceEeeceeecCCcccceeeecCCccccCCCce
Q 018293 1 MTINPNDA-VIVCA----------RNEDDVSHLEVYILEESDGGD--PNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 67 (358)
Q Consensus 1 l~~~p~~~-~l~~~----------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 67 (358)
++|+|+++ +|+++ ..++ .+++|+...+.. +.....| ...+.++.| +|++++
T Consensus 18 ~~~sp~g~~~l~~g~~~g~~~~~~~~d~-----~v~iw~~~~~~~~~~~~~~~~----~~~v~~~~~-------s~~~~~ 81 (416)
T 2pm9_A 18 FAWSHDKIPLLVSGTVSGTVDANFSTDS-----SLELWSLLAADSEKPIASLQV----DSKFNDLDW-------SHNNKI 81 (416)
T ss_dssp CCBCSSSSCEEEEBCBSSCCCSSCCCCC-----CCEEEESSSGGGCSCSCCCCC----SSCEEEEEE-------CSSSSC
T ss_pred EeeCCCCCCEEEEEecCcccccccCCCC-----eEEEEEccCCCCCcEEEEEec----CCceEEEEE-------CCCCCe
Confidence 57999987 77777 3443 566676654321 1111112 333446655 899999
Q ss_pred EEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeE
Q 018293 68 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 147 (358)
Q Consensus 68 l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v 147 (358)
|++|+.||.|++||+.+.... ......+.+|...|.+++|+|+++.+|++++.||.|
T Consensus 82 l~~~~~dg~v~vw~~~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v 138 (416)
T 2pm9_A 82 IAGALDNGSLELYSTNEANNA-----------------------INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEI 138 (416)
T ss_dssp EEEEESSSCEEEECCSSTTSC-----------------------CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCE
T ss_pred EEEEccCCeEEEeeccccccc-----------------------ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeE
Confidence 999999999999999752111 123345668999999999999867799999999999
Q ss_pred EEEECCCCc------eeee---ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeee------cCCee
Q 018293 148 KIWDVAAGK------CNLT---LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV------AADVE 212 (358)
Q Consensus 148 ~iwd~~~~~------~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~i~ 212 (358)
++||+.+++ .... +..|...|.+++|+|++..++++++.||.|++||+++.+.......+ ...+.
T Consensus 139 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~ 218 (416)
T 2pm9_A 139 FIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLS 218 (416)
T ss_dssp EBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEE
T ss_pred EEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceE
Confidence 999999876 3333 36788999999999995589999999999999999987765544443 67899
Q ss_pred eEEEcCCCCCeEEEEecCC---eEEEEEcccCCCCCCCCCCCccEEEe-ecCCceeEEEecC-CCCcEEEEEeCCCcEEE
Q 018293 213 SLAWDPHAEHSFVVSLEDG---TIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCTISYNP-LVPNLLATGSTDKMVKL 287 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~i~~i~~~~-~~~~~l~~~~~dg~i~i 287 (358)
+++|+|++..++++++.|+ .|++||+++.. .+...+. .|...|.+++|+| ++ .+|++++.||.|++
T Consensus 219 ~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~ 289 (416)
T 2pm9_A 219 VVEWHPKNSTRVATATGSDNDPSILIWDLRNAN--------TPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLL 289 (416)
T ss_dssp EEEECSSCTTEEEEEECCSSSCCCCEEETTSTT--------SCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEE
T ss_pred EEEECCCCCCEEEEEECCCCCceEEEEeCCCCC--------CCcEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCEEE
Confidence 9999998778999999998 99999999862 4455666 8999999999999 65 89999999999999
Q ss_pred EecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 288 WDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
||+++++ .+..+..|...|.+++|+|+++.+|++++.||.|++|++.+.....
T Consensus 290 wd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 290 WNPESAE--QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp ECSSSCC--EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred eeCCCCc--cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 9999987 5667778999999999999993379999999999999998876543
No 25
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=282.53 Aligned_cols=295 Identities=18% Similarity=0.222 Sum_probs=220.8
Q ss_pred CcccCCCcEEEEEEec-CCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCC---CceEEecCCCCe
Q 018293 1 MTINPNDAVIVCARNE-DDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREK---GNFMAVGSMEPA 76 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~l~~g~~dg~ 76 (358)
++|+|+++.++++... ...+ .+.+|+...+...... .......+.++.| +|+ +++|++|+.||.
T Consensus 24 ~~~~p~~~~l~~~~s~~~~d~--~v~iw~~~~~~~~~~~---~~~~~~~v~~~~~-------~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 24 CKWVPCSAKFVTMGNFARGTG--VIQLYEIQHGDLKLLR---EIEKAKPIKCGTF-------GATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEECTTSSEEEEEEC--CCCE--EEEEEEECSSSEEEEE---EEEESSCEEEEEC-------TTCCTTTCCEEEEETTSC
T ss_pred EEEcCCCceEEEecCccCCCc--EEEEEeCCCCccccee---eecccCcEEEEEE-------cCCCCCCceEEEecCCCe
Confidence 4789999766655432 0003 5666666654221121 1122344456666 666 799999999999
Q ss_pred EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEE------ecCCCCCcEEEEEEcCCeEEEE
Q 018293 77 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL------AWNKEFRNILASASADKQVKIW 150 (358)
Q Consensus 77 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~------~~~~~~~~~l~s~~~dg~v~iw 150 (358)
|++||+.+.+. ....+.+|...|.++ +|+|+ +.+|++++.||.|++|
T Consensus 92 i~iwd~~~~~~--------------------------~~~~~~~~~~~v~~~~~~~~~~~s~~-~~~l~~~~~d~~i~vw 144 (357)
T 3i2n_A 92 LHIWNLEAPEM--------------------------PVYSVKGHKEIINAIDGIGGLGIGEG-APEIVTGSRDGTVKVW 144 (357)
T ss_dssp EEEECTTSCSS--------------------------CSEEECCCSSCEEEEEEESGGGCC-C-CCEEEEEETTSCEEEE
T ss_pred EEEEeCCCCCc--------------------------cEEEEEecccceEEEeeccccccCCC-ccEEEEEeCCCeEEEE
Confidence 99999975431 223455799999999 56778 6799999999999999
Q ss_pred ECCCCc-eeeeeccccc----ceeeEE----EcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCC--
Q 018293 151 DVAAGK-CNLTLEHHTD----KVQAVA----WNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPH-- 219 (358)
Q Consensus 151 d~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~-- 219 (358)
|+++++ .+..+..|.. .+.+++ |+|++ .++++++.||.|++||+++.+... ...+...+.+++|+|.
T Consensus 145 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~ 222 (357)
T 3i2n_A 145 DPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDI 222 (357)
T ss_dssp CTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSS
T ss_pred eCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCCCC
Confidence 999886 6777765544 788888 67888 899999999999999999877643 5677889999999993
Q ss_pred CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc----
Q 018293 220 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP---- 295 (358)
Q Consensus 220 ~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---- 295 (358)
++..+++++.||.|++||+++..... ......+..|...|.+++|+|++..+|++++.||.|++||++....
T Consensus 223 ~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 223 SMNKLVATSLEGKFHVFDMRTQHPTK----GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp SCCEEEEEESTTEEEEEEEEEEETTT----EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred CCCEEEEECCCCeEEEEeCcCCCccc----ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc
Confidence 34589999999999999999873211 0011133489999999999999844899999999999999986542
Q ss_pred -------------eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 296 -------------SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 296 -------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
..+..+..|...|.+++|+|++++++++++.||.|++||+.+.+.
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 246667789999999999999997444899999999999987654
No 26
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.4e-41 Score=286.00 Aligned_cols=292 Identities=16% Similarity=0.216 Sum_probs=226.8
Q ss_pred CcccCC----CcEEEEEEecCCCceEEEEEEeccCCCCCceEe-eceeecCCcccceeeecCCccccCC----CceEEec
Q 018293 1 MTINPN----DAVIVCARNEDDVSHLEVYILEESDGGDPNLYV-HHHIIIPAFPLCMAWLDCPLKDREK----GNFMAVG 71 (358)
Q Consensus 1 l~~~p~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~----~~~l~~g 71 (358)
++|+|+ +..++++..++ .+.+|+...+.....+. +........+.++.| +|+ +++|++|
T Consensus 24 i~~~p~~~~~~~~~~~~~~~~-----~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 24 VQFNWHSKEGDPLVFATVGSN-----RVTLYECHSQGEIRLLQSYVDADADENFYTCAW-------TYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCCTTSCEEEEEEETT-----EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEE-------EECTTTCCEEEEEE
T ss_pred EEEecccCCCCceEEEECCCC-----EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEe-------ccCCCCCCCEEEEe
Confidence 467873 66677776666 77777776543322222 222223344557766 556 7899999
Q ss_pred CCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEE
Q 018293 72 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 151 (358)
Q Consensus 72 ~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 151 (358)
+.||.|++||+.+++.. ..+.+|...|.+++|+|+++.+|++|+.||.|++||
T Consensus 92 ~~dg~i~v~d~~~~~~~---------------------------~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 92 GSRGIIRIINPITMQCI---------------------------KHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp ETTCEEEEECTTTCCEE---------------------------EEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred cCCCEEEEEEchhceEe---------------------------eeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 99999999999754332 244579999999999994378999999999999999
Q ss_pred CCCCceeeee---cccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-----------------------
Q 018293 152 VAAGKCNLTL---EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW----------------------- 205 (358)
Q Consensus 152 ~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------------------- 205 (358)
+++++.+..+ ..|...|.+++|+|++ .++++++.||.|++||+++.+......
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred eecCeEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCc
Confidence 9999988888 6899999999999998 899999999999999998764332211
Q ss_pred -----eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCC-----CCCCCCccEEEeecCCceeEEEecCC--CC
Q 018293 206 -----AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDP-----DSTSQQSSFTLHAHDKAVCTISYNPL--VP 273 (358)
Q Consensus 206 -----~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~i~~~~~--~~ 273 (358)
.+...|.+++|+ +.++++++.||.|++||+++..... .......+..+..|...|.+++|+|+ +
T Consensus 224 ~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~- 299 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ- 299 (366)
T ss_dssp EEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-
T ss_pred cccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-
Confidence 177889999998 3489999999999999998764311 00111336677889999999999998 7
Q ss_pred cEEEEEeCCCcEEEEecCCCCce--eeEecCCC--CceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 274 NLLATGSTDKMVKLWDLSNNQPS--CIASRNPK--AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
.+|++|+.||.|++||+.++++. ....+..| ...|.+++|+|+++ +|++++.||.|++||+.+
T Consensus 300 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 300 KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred cEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEecC
Confidence 89999999999999999987643 33355555 78999999999999 588999999999999853
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.5e-41 Score=302.41 Aligned_cols=269 Identities=24% Similarity=0.382 Sum_probs=222.4
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.|+++..++ .+.+|+...... .....| ...+.++ +|+|++++|++|+.||.|++|
T Consensus 309 ~~~~~~~~~l~t~~~d~-----~i~~w~~~~~~~-~~~~~~----~~~v~~~-------~~s~~g~~l~~~~~dg~v~~~ 371 (577)
T 2ymu_A 309 VAFSPDGQTIASASDDK-----TVKLWNRNGQHL-QTLTGH----SSSVWGV-------AFSPDGQTIASASDDKTVKLW 371 (577)
T ss_dssp EEECTTSSEEEEEETTS-----CEEEEETTSCEE-EEECCC----SSCEEEE-------EECTTSSEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEEeCCC-----eEEEEeCCCCee-EEEeCC----CCCEEEE-------EECCCCCEEEEEeCCCEEEEE
Confidence 46899999999997776 667777654311 111111 2222344 458999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
+... .....+.+|...|.+++|+|+ +++|++++.|+.|++||. +++.+..
T Consensus 372 ~~~~----------------------------~~~~~~~~~~~~v~~~~~s~d-g~~l~~~~~d~~v~~~~~-~~~~~~~ 421 (577)
T 2ymu_A 372 NRNG----------------------------QLLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNR-NGQLLQT 421 (577)
T ss_dssp ETTC----------------------------CEEEEEECCSSCEEEEEECTT-SSCEEEEETTSEEEEECT-TCCEEEE
T ss_pred cCCC----------------------------CEEEEecCCCCCeEEEEECCC-CCEEEEEeCCCEEEEEeC-CCCEEEE
Confidence 9642 122244579999999999999 678999999999999995 5778888
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEccc
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~ 240 (358)
+.+|...|++++|+|++ .++++++.|+.|++||.. .+.......|...|.+++|+|+ +.++++++.|+.|++||..
T Consensus 422 ~~~~~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd-~~~las~~~d~~i~iw~~~- 497 (577)
T 2ymu_A 422 LTGHSSSVWGVAFSPDD-QTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNRN- 497 (577)
T ss_dssp EECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTT-SCEEEEEETTSEEEEEETT-
T ss_pred ecCCCCCeEEEEECCCC-CEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCEEEEEcCC-
Confidence 99999999999999999 899999999999999964 4444556678899999999995 5599999999999999953
Q ss_pred CCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeE
Q 018293 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFV 320 (358)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 320 (358)
+ +.+..+.+|...|++++|+|++ ++|++++.||.|++||.. ++ .+..+.+|...|++++|+||+++
T Consensus 498 ~---------~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~v~lwd~~-~~--~~~~~~~h~~~v~~~~fs~dg~~- 563 (577)
T 2ymu_A 498 G---------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--LLQTLTGHSSSVWGVAFSPDGQT- 563 (577)
T ss_dssp S---------CEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-SC--EEEEEECCSSCEEEEEECTTSSC-
T ss_pred C---------CEEEEEeCCCCCEEEEEEcCCC-CEEEEEECcCEEEEEeCC-CC--EEEEEcCCCCCEEEEEEcCCCCE-
Confidence 3 6778899999999999999998 899999999999999964 44 56677899999999999999996
Q ss_pred EEEEccCCeEEEEE
Q 018293 321 LAIGGSKGKLEIWD 334 (358)
Q Consensus 321 l~~~~~dg~i~vw~ 334 (358)
|++++.|+.|++||
T Consensus 564 l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 564 IASASSDKTVKLWN 577 (577)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEeCCCEEEEeC
Confidence 88999999999997
No 28
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3e-40 Score=280.24 Aligned_cols=254 Identities=21% Similarity=0.305 Sum_probs=215.8
Q ss_pred cccceeeecCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEE
Q 018293 48 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 127 (358)
Q Consensus 48 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 127 (358)
.+.|+.| +|++++|++|+.||+|+|||..+..... .+..|...|.+
T Consensus 66 ~V~~~~~-------s~d~~~l~s~s~Dg~v~vWd~~~~~~~~---------------------------~~~~~~~~v~~ 111 (354)
T 2pbi_B 66 KVLCMDW-------CKDKRRIVSSSQDGKVIVWDSFTTNKEH---------------------------AVTMPCTWVMA 111 (354)
T ss_dssp CEEEEEE-------CTTSSEEEEEETTSEEEEEETTTCCEEE---------------------------EEECSSSCCCE
T ss_pred eEEEEEE-------CCCCCEEEEEeCCCeEEEEECCCCCcce---------------------------EEecCCCCEEE
Confidence 3446655 8999999999999999999986543222 23357888999
Q ss_pred EecCCCCCcEEEEEEcCCeEEEEECCCC------ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc
Q 018293 128 LAWNKEFRNILASASADKQVKIWDVAAG------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS 201 (358)
Q Consensus 128 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 201 (358)
++|+|+ +.++++|+.|+.+++|++... .....+..|...|.+++|+|++ ..+++++.|++|++||+++++..
T Consensus 112 ~~~sp~-g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~ 189 (354)
T 2pbi_B 112 CAYAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLL 189 (354)
T ss_dssp EEECTT-SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEE
T ss_pred EEECCC-CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEE
Confidence 999999 679999999999999998643 3455677899999999999998 88999999999999999998887
Q ss_pred cceeeecCCeeeEEEcCC-CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe
Q 018293 202 GFKWAVAADVESLAWDPH-AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 202 ~~~~~~~~~i~~~~~~~~-~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 280 (358)
.....|...+.+++|+|+ +++++++|+.||.|++||++++ ..+..+..|...|++++|+|++ .+|++|+
T Consensus 190 ~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~---------~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s 259 (354)
T 2pbi_B 190 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG---------QCVQAFETHESDVNSVRYYPSG-DAFASGS 259 (354)
T ss_dssp EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTS-SEEEEEE
T ss_pred EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC---------cEEEEecCCCCCeEEEEEeCCC-CEEEEEe
Confidence 777788999999999985 3479999999999999999987 7788889999999999999998 8999999
Q ss_pred CCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccccC
Q 018293 281 TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 281 ~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
.|++|++||++..+.........+...+.+++|+|+++ +|++|+.|+.|++||+.+++.+..+.+|.
T Consensus 260 ~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~l~~h~ 326 (354)
T 2pbi_B 260 DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKGSRVSILFGHE 326 (354)
T ss_dssp TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEECCCS
T ss_pred CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCCceEEEEECCC
Confidence 99999999999887444443344456789999999999 58899999999999999988776655543
No 29
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-41 Score=293.34 Aligned_cols=298 Identities=18% Similarity=0.238 Sum_probs=234.0
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCC-CceEEecCCCCeEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREK-GNFMAVGSMEPAIEI 79 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~v 79 (358)
++|+|++++|+++..++ .+.+|+.............-......+.++.| +|+ +++|++|+.||.|++
T Consensus 73 ~~~s~~~~~l~~~~~dg-----~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~~l~s~~~dg~v~i 140 (416)
T 2pm9_A 73 LDWSHNNKIIAGALDNG-----SLELYSTNEANNAINSMARFSNHSSSVKTVKF-------NAKQDNVLASGGNNGEIFI 140 (416)
T ss_dssp EEECSSSSCEEEEESSS-----CEEEECCSSTTSCCCEEEECCCSSSCCCEEEE-------CSSSTTBEEEECSSSCEEB
T ss_pred EEECCCCCeEEEEccCC-----eEEEeecccccccccchhhccCCccceEEEEE-------cCCCCCEEEEEcCCCeEEE
Confidence 46899999999997776 67777776521111011111112334456666 787 899999999999999
Q ss_pred EEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceee
Q 018293 80 WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL 159 (358)
Q Consensus 80 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 159 (358)
||+.+.+..... ..........+|...|.+++|+|+++.+|++++.||.|++||+++++.+.
T Consensus 141 wd~~~~~~~~~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 141 WDMNKCTESPSN------------------YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI 202 (416)
T ss_dssp CBTTTTSSCTTT------------------CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE
T ss_pred EECCCCcccccc------------------ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce
Confidence 999865421100 00011123457999999999999977899999999999999999999888
Q ss_pred eeccc------ccceeeEEEcCCCCcEEEEEeCCC---cEEEEEcccC-CCcccee-eecCCeeeEEEcCCCCCeEEEEe
Q 018293 160 TLEHH------TDKVQAVAWNHHSPQILLSGSFDR---SVVMKDARIS-THSGFKW-AVAADVESLAWDPHAEHSFVVSL 228 (358)
Q Consensus 160 ~~~~~------~~~v~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~-~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 228 (358)
.+..+ ...+.+++|+|++..++++++.|+ .|++||+++. ....... .+...+.+++|+|+++.++++++
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~ 282 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSG 282 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEE
T ss_pred EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEe
Confidence 88766 789999999999867999999999 9999999986 4444444 68899999999996667999999
Q ss_pred cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEe--------
Q 018293 229 EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS-------- 300 (358)
Q Consensus 229 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------- 300 (358)
.||.|++||+++. +.+..+..|...|.+++|+|+++.+|++++.|+.|++||+.+........
T Consensus 283 ~dg~v~~wd~~~~---------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 353 (416)
T 2pm9_A 283 RDNTVLLWNPESA---------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQE 353 (416)
T ss_dssp SSSEEEEECSSSC---------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---------
T ss_pred CCCCEEEeeCCCC---------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccC
Confidence 9999999999987 77888999999999999999987899999999999999998765321110
Q ss_pred -------------------------cCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 301 -------------------------RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 301 -------------------------~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
...|..++.+++|+|+|+ +|++++.||.|+||++.++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 354 SETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK-LVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE-EECBCTTSSCBCCBCCCCC
T ss_pred CcccccccccccccccccccccccCCccccCCccceEEeeCCe-EEEEeCCCCeEEEEEeccC
Confidence 011567788999999999 5999999999999999864
No 30
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.4e-40 Score=289.43 Aligned_cols=281 Identities=15% Similarity=0.181 Sum_probs=222.0
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.|+++..++ .+++|+............+. ..++ ..|++++++|++|+.||.|++|
T Consensus 62 ~~~s~~g~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~------~~~~------~~~~~~~~~l~~~~~dg~i~iw 124 (420)
T 3vl1_A 62 NTFEKVGSHLYKARLDG-----HDFLFNTIIRDGSKMLKRAD------YTAV------DTAKLQMRRFILGTTEGDIKVL 124 (420)
T ss_dssp CEEEEEETTEEEEEETT-----EEEEEECCSEETTTTSCSCC------EEEE------EEECSSSCEEEEEETTSCEEEE
T ss_pred eeeeecCCeEEEEEcCC-----cEEEEEecccceeeEEecCC------ceEE------EEEecCCCEEEEEECCCCEEEE
Confidence 47899999999998887 88888876542222222221 1122 1248999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
|+.+.. ....+.+|...|++++|+|+ +.+|++|+.|+.|++||+.+++.+..
T Consensus 125 d~~~~~---------------------------~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~ 176 (420)
T 3vl1_A 125 DSNFNL---------------------------QREIDQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSVKDGSNPRT 176 (420)
T ss_dssp CTTSCE---------------------------EEEETTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCCCEE
T ss_pred eCCCcc---------------------------eeeecccccCccEEEEECCC-CCEEEEEeCCCeEEEEeCCCCcCceE
Confidence 986432 22345579999999999999 67999999999999999999999999
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceee---e---------------------cCCeeeEEE
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA---V---------------------AADVESLAW 216 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~---------------------~~~i~~~~~ 216 (358)
+.+|...|.+++|+|++ .+|++++.|+.|++||+++++....... + ...+.+++|
T Consensus 177 ~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (420)
T 3vl1_A 177 LIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF 255 (420)
T ss_dssp EECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred EcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence 99999999999999998 8999999999999999988765543322 2 244556667
Q ss_pred cCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc
Q 018293 217 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295 (358)
Q Consensus 217 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 295 (358)
+|+ +.++++++.||.|++||+++. .....+ ..|...|.+++|+|++..+|++|+.||.|++||+++++.
T Consensus 256 s~~-~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 256 GTY-GKYVIAGHVSGVITVHNVFSK---------EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp SCT-TEEEEEEETTSCEEEEETTTC---------CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred cCC-CCEEEEEcCCCeEEEEECCCC---------ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 784 558999999999999999887 444444 457889999999999844999999999999999998753
Q ss_pred eeeEecC-CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 296 SCIASRN-PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 296 ~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
. +..+. .|...|.++.+. +++ +|++++.||.|++|++.+.+.
T Consensus 326 ~-~~~~~~~~~~~v~~~~~~-~~~-~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 326 P-VGEFLINEGTPINNVYFA-AGA-LFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp C-SEEEEESTTSCEEEEEEE-TTE-EEEEETTTEEEEEEEECCTTC
T ss_pred c-hhhhhccCCCCceEEEeC-CCC-EEEEecCCccEEEEeccCCCC
Confidence 2 23333 367788888654 666 589999999999999987543
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-39 Score=280.33 Aligned_cols=273 Identities=19% Similarity=0.309 Sum_probs=211.4
Q ss_pred cCCcccceeeecCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCccc
Q 018293 45 IPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS 124 (358)
Q Consensus 45 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 124 (358)
....+.|++| +|+|++||+|+ ++.++||++.+++............ .............+...
T Consensus 63 h~~~V~~v~f-------spdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~ 125 (393)
T 1erj_A 63 HTSVVCCVKF-------SNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAAN---------KDPENLNTSSSPSSDLY 125 (393)
T ss_dssp CSSCCCEEEE-------CTTSSEEEEEC-BSCEEEEETTTCCEEEEECC--------------------------CCCCB
T ss_pred CCCEEEEEEE-------CCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccc---------cccccccccccCCCcee
Confidence 3444556655 99999999987 7899999998765433211000000 00000000111234456
Q ss_pred EEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce
Q 018293 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 204 (358)
Q Consensus 125 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 204 (358)
|.+++|+|+ +++|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++ .+|++++.|+.|++||+++++... .
T Consensus 126 v~~v~~s~d-g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~-~ 202 (393)
T 1erj_A 126 IRSVCFSPD-GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSL-T 202 (393)
T ss_dssp EEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE-E
T ss_pred EEEEEECCC-CCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEE-E
Confidence 999999999 6799999999999999999999999999999999999999999 899999999999999999876544 3
Q ss_pred eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-------eecCCceeEEEecCCCCcEEE
Q 018293 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-------HAHDKAVCTISYNPLVPNLLA 277 (358)
Q Consensus 205 ~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~i~~~~~~~~~l~ 277 (358)
..+...+.+++|+|.++.++++|+.||.|++||++++ ..+..+ .+|...|.+++|+|++ .+|+
T Consensus 203 ~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~---------~~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~ 272 (393)
T 1erj_A 203 LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG---------FLVERLDSENESGTGHKDSVYSVVFTRDG-QSVV 272 (393)
T ss_dssp EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC---------CEEEEEC------CCCSSCEEEEEECTTS-SEEE
T ss_pred EEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC---------cEEEeecccccCCCCCCCCEEEEEECCCC-CEEE
Confidence 4567789999999966779999999999999999876 334333 5788999999999998 8999
Q ss_pred EEeCCCcEEEEecCCCCc----------eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccccc
Q 018293 278 TGSTDKMVKLWDLSNNQP----------SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 347 (358)
Q Consensus 278 ~~~~dg~i~i~d~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 347 (358)
+|+.|+.|++||+++... .+...+.+|...|.+++|+|++++ |++|+.||.|++||+.+++.+..+-+|
T Consensus 273 s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~iwd~~~~~~~~~l~~h 351 (393)
T 1erj_A 273 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWDKKSGNPLLMLQGH 351 (393)
T ss_dssp EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCE-EEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCE-EEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 999999999999976431 234566789999999999999995 889999999999999998877655444
Q ss_pred C
Q 018293 348 Y 348 (358)
Q Consensus 348 ~ 348 (358)
.
T Consensus 352 ~ 352 (393)
T 1erj_A 352 R 352 (393)
T ss_dssp S
T ss_pred C
Confidence 3
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.9e-39 Score=272.60 Aligned_cols=279 Identities=17% Similarity=0.295 Sum_probs=228.5
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceE-eeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLY-VHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~v 79 (358)
++|+|++++|+++. ++ .+.+|+...+...... ..........+.++.| +|++++|++++.||.|++
T Consensus 57 ~~~~~~~~~l~~~~-dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-KG-----CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL-------LPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp EEECSSSSEEEEEC-BS-----EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEE-------CTTSSEEEEEESSSEEEE
T ss_pred EEEecCCcEEEEcC-CC-----eEEEEECCCCCceeeeecccccCCCCcEEEEEE-------cCCCCEEEEEcCCCcEEE
Confidence 46899999999996 65 7788887654322221 1111112334445555 899999999999999999
Q ss_pred EEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceee
Q 018293 80 WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL 159 (358)
Q Consensus 80 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 159 (358)
||+.+.+. .....+..|...|.+++|+|+ +.++++++.||.|++||+++++.+.
T Consensus 124 ~d~~~~~~-------------------------~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 124 WDLAAPTP-------------------------RIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp EECCCC---------------------------EEEEEEECSSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EECCCCCc-------------------------ceeeecccCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCceee
Confidence 99975431 122344568899999999998 6799999999999999999999999
Q ss_pred eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcc
Q 018293 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239 (358)
Q Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 239 (358)
.+..|...+.+++|+|++ .++++++.||.|++||+++.+... ...+...+.+++|+|+ +.++++++.+|.|++||++
T Consensus 178 ~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~-~~~~~~~v~~~~~s~~-~~~l~~~~~~~~i~~~~~~ 254 (337)
T 1gxr_A 178 QFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQLQ-QHDFTSQIFSLGYCPT-GEWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp EECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEECTT-SSEEEEEETTSCEEEEETT
T ss_pred eeecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCceEe-eecCCCceEEEEECCC-CCEEEEEcCCCcEEEEECC
Confidence 999999999999999998 899999999999999999877655 4467788999999995 5589999999999999998
Q ss_pred cCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCe
Q 018293 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 319 (358)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 319 (358)
+. . ...+..|...|.+++|+|++ .+|++++.||.|++||+.+++.. . ...|...+.+++|+|+++
T Consensus 255 ~~---------~-~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~--~-~~~~~~~v~~~~~s~~~~- 319 (337)
T 1gxr_A 255 KP---------D-KYQLHLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPYGASI--F-QSKESSSVLSCDISVDDK- 319 (337)
T ss_dssp SS---------C-EEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEE--E-EEECSSCEEEEEECTTSC-
T ss_pred CC---------C-eEEEcCCccceeEEEECCCC-CEEEEecCCCcEEEEECCCCeEE--E-EecCCCcEEEEEECCCCC-
Confidence 75 2 45677899999999999998 89999999999999999998743 2 234678899999999999
Q ss_pred EEEEEccCCeEEEEEcc
Q 018293 320 VLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 320 ~l~~~~~dg~i~vw~~~ 336 (358)
.|++++.||.|++|++.
T Consensus 320 ~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 320 YIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEEETTSCEEEEEEE
T ss_pred EEEEecCCCeEEEEEEe
Confidence 48889999999999973
No 33
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-39 Score=295.69 Aligned_cols=290 Identities=16% Similarity=0.162 Sum_probs=227.8
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCC----Ce
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME----PA 76 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d----g~ 76 (358)
++|+|+|++|++|..++ .+.+|+...+...... .-......+.+++| +|++++|++++.+ +.
T Consensus 65 ~~~spdg~~lasg~~d~-----~v~lWd~~~~~~~~~~--~~~~~~~~v~~v~f-------s~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 65 AKTSPSGYYCASGDVHG-----NVRIWDTTQTTHILKT--TIPVFSGPVKDISW-------DSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp EEECTTSSEEEEEETTS-----EEEEEESSSTTCCEEE--EEECSSSCEEEEEE-------CTTSCEEEEEECCSSCSEE
T ss_pred EEECCCCcEEEEEeCCC-----CEEEeECCCCcceeeE--eecccCCceEEEEE-------CCCCCEEEEEECCCCceeE
Confidence 47999999999998877 7888887543211111 11112233345544 8999999988765 47
Q ss_pred EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCc
Q 018293 77 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK 156 (358)
Q Consensus 77 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 156 (358)
|++||.. .. ...+.+|...|++++|+|++...|++|+.|++|++||..+++
T Consensus 131 v~~wd~~--~~---------------------------~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 131 VFLFDTG--TS---------------------------NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp EEETTTC--CB---------------------------CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred EEEeeCC--CC---------------------------cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe
Confidence 8888742 11 124568999999999999965679999999999999999999
Q ss_pred eeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-------eecCCeeeEEEcCCCCCeEEEEec
Q 018293 157 CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-------AVAADVESLAWDPHAEHSFVVSLE 229 (358)
Q Consensus 157 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~ 229 (358)
+...+.+|...|.+++|+|++ .+|++++.|++|++||+.+++...... .|...|.+++|+|+ +.++++++.
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd-g~~l~s~s~ 259 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD-GTKIASASA 259 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT-SSEEEEEET
T ss_pred EeeeeccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC-CCEEEEEeC
Confidence 999999999999999999999 899999999999999998776544332 68889999999995 558999999
Q ss_pred CCeEEEEEcccCCCCCCC----------------------------------CCCCccEEEeecCCceeEEEecCCCCcE
Q 018293 230 DGTIKGFDIRTAKSDPDS----------------------------------TSQQSSFTLHAHDKAVCTISYNPLVPNL 275 (358)
Q Consensus 230 dg~i~i~d~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 275 (358)
|++|++||+++++..... ........+.+|...|++++|+|++ .+
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg-~~ 338 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG-KT 338 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC-CE
Confidence 999999999875321100 0011234556899999999999998 89
Q ss_pred EEEEeCCCcEEEEecCCCCceeeEec-CCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 276 LATGSTDKMVKLWDLSNNQPSCIASR-NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 276 l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
|++++.|+.|++||+.+++. ...+ ..|...|.+++|++++. +++++.|+.+++|++.++..
T Consensus 339 l~s~s~D~~v~~Wd~~~~~~--~~~~~~~h~~~v~~~~~s~~~~--l~s~s~d~~v~~w~~~~~~~ 400 (611)
T 1nr0_A 339 LFSADAEGHINSWDISTGIS--NRVFPDVHATMITGIKTTSKGD--LFTVSWDDHLKVVPAGGSGV 400 (611)
T ss_dssp EEEEETTSCEEEEETTTCCE--EECSSCSCSSCEEEEEECTTSC--EEEEETTTEEEEECSSSSSS
T ss_pred EEEEeCCCcEEEEECCCCce--eeecccCCcceEEEEEECCCCc--EEEEEcCCceEEeecCCccc
Confidence 99999999999999998873 3333 57889999999998875 77899999999999876543
No 34
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=279.30 Aligned_cols=244 Identities=23% Similarity=0.363 Sum_probs=202.0
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+|+|+|++||+|+.|+.|+|||+.+..... ......+|...|.+++|+|+ +++|+
T Consensus 23 ~~sp~g~~las~~~D~~i~iw~~~~~~~~~------------------------~~~~~~~h~~~v~~~~~sp~-g~~l~ 77 (345)
T 3fm0_A 23 AWNPAGTLLASCGGDRRIRIWGTEGDSWIC------------------------KSVLSEGHQRTVRKVAWSPC-GNYLA 77 (345)
T ss_dssp EECTTSSCEEEEETTSCEEEEEEETTEEEE------------------------EEEECSSCSSCEEEEEECTT-SSEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCCCccee------------------------eeeeccccCCcEEEEEECCC-CCEEE
Confidence 449999999999999999999987532111 11123579999999999999 67999
Q ss_pred EEEcCCeEEEEECCCC--ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc---cceeeecCCeeeE
Q 018293 140 SASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS---GFKWAVAADVESL 214 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~i~~~ 214 (358)
+|+.|+++++||+.++ +++..+.+|...|.+++|+|++ ++|++++.|+.|++||++..... .....|...|.++
T Consensus 78 s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp EEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred EEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence 9999999999999876 4577889999999999999999 89999999999999999876542 2344678889999
Q ss_pred EEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCC
Q 018293 215 AWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 294 (358)
+|+|+ +.++++++.|+.|++||.+.... .....+.+|...|.+++|+|++ .+|++|+.|++|++||.....
T Consensus 157 ~~~p~-~~~l~s~s~d~~i~~w~~~~~~~-------~~~~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 157 VWHPS-QELLASASYDDTVKLYREEEDDW-------VCCATLEGHESTVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp EECSS-SSCEEEEETTSCEEEEEEETTEE-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEECTT
T ss_pred EECCC-CCEEEEEeCCCcEEEEEecCCCE-------EEEEEecCCCCceEEEEECCCC-CEEEEEeCCCeEEEeccccCC
Confidence 99995 45899999999999999987521 3456788999999999999998 899999999999999974321
Q ss_pred c-------------eeeEecCC-CCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 295 P-------------SCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 295 ~-------------~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
. .++..+.+ |...|.+++|+|++.. |++++.|+.|++|+...+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 228 NEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA-LATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp CTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCC-EEEEETTSCEEEEEECTTS
T ss_pred CCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCE-EEEEeCCCeEEEEEeCCCC
Confidence 1 12233333 7889999999999994 8999999999999987654
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-39 Score=294.84 Aligned_cols=282 Identities=23% Similarity=0.344 Sum_probs=230.2
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.++++..++ .+.+|+.... .......| ...+.++ +|+|++++|++++.||.|++|
T Consensus 268 v~~~~d~~~l~~~~~d~-----~i~~w~~~~~-~~~~~~~h----~~~v~~~-------~~~~~~~~l~t~~~d~~i~~w 330 (577)
T 2ymu_A 268 VAFRPDGQTIASASDDK-----TVKLWNRNGQ-LLQTLTGH----SSSVWGV-------AFSPDGQTIASASDDKTVKLW 330 (577)
T ss_dssp EEECTTSSEEEEEETTS-----CEEEEETTSC-EEEEECCC----SSCEEEE-------EECTTSSEEEEEETTSCEEEE
T ss_pred EEEcCCCCEEEEEeCCC-----EEEEEeCCCc-EEEEEecC----CCCeEEE-------EECCCCCEEEEEeCCCeEEEE
Confidence 46899999999997776 6777876442 11111112 2222333 458999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
|..... ...+.+|...|.+++|+|+ +.+|++++.|+.|++||. +++.+..
T Consensus 331 ~~~~~~----------------------------~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~v~~~~~-~~~~~~~ 380 (577)
T 2ymu_A 331 NRNGQH----------------------------LQTLTGHSSSVWGVAFSPD-GQTIASASDDKTVKLWNR-NGQLLQT 380 (577)
T ss_dssp ETTSCE----------------------------EEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEET-TCCEEEE
T ss_pred eCCCCe----------------------------eEEEeCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEcC-CCCEEEE
Confidence 975321 1234579999999999999 679999999999999995 5778888
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEccc
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~ 240 (358)
+.+|...|.+++|+|++ ++|++++.|+.|++||.. ++.......+...|.+++|+|+ +.++++++.|+.|++||...
T Consensus 381 ~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d~~v~~w~~~~ 457 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPD-DQTIASASDDKTVKLWNRNG 457 (577)
T ss_dssp EECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTS
T ss_pred ecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCC-CCEEEEEcCCCEEEEEECCC
Confidence 99999999999999999 889999999999999964 4444556678899999999995 55899999999999999642
Q ss_pred CCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeE
Q 018293 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFV 320 (358)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 320 (358)
+.+..+.+|...|.+++|+|++ .+|++++.|+.|++||.. ++ .+..+.+|...|++++|+|++++
T Consensus 458 ----------~~~~~~~~~~~~v~~~~~spd~-~~las~~~d~~i~iw~~~-~~--~~~~~~~h~~~v~~l~~s~dg~~- 522 (577)
T 2ymu_A 458 ----------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--LLQTLTGHSSSVRGVAFSPDGQT- 522 (577)
T ss_dssp ----------CEEEEEECCSSCEEEEEECTTS-CEEEEEETTSEEEEEETT-SC--EEEEEECCSSCEEEEEECTTSSC-
T ss_pred ----------CEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEcCC-CC--EEEEEeCCCCCEEEEEEcCCCCE-
Confidence 5677888999999999999998 899999999999999964 44 56677889999999999999995
Q ss_pred EEEEccCCeEEEEEccCCCccccccccC
Q 018293 321 LAIGGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 321 l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
|++++.||.|++||. +++.+..+.+|.
T Consensus 523 l~s~~~dg~v~lwd~-~~~~~~~~~~h~ 549 (577)
T 2ymu_A 523 IASASDDKTVKLWNR-NGQLLQTLTGHS 549 (577)
T ss_dssp EEEEETTSEEEEECT-TSCEEEEEECCS
T ss_pred EEEEECcCEEEEEeC-CCCEEEEEcCCC
Confidence 889999999999996 566666655543
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.1e-40 Score=279.60 Aligned_cols=286 Identities=15% Similarity=0.150 Sum_probs=224.7
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCC--CCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGG--DPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 78 (358)
++|+|++++|+++..++ .+++|+...+. ....+.. ....+.++.| +|++++|++|+.||.|+
T Consensus 14 ~~~s~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~----h~~~v~~~~~-------~~~~~~l~~~~~dg~i~ 77 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNNH-----EVHIYEKSGNKWVQVHELKE----HNGQVTGVDW-------APDSNRIVTCGTDRNAY 77 (372)
T ss_dssp EEECTTSSEEEEECSSS-----EEEEEEEETTEEEEEEEEEC----CSSCEEEEEE-------ETTTTEEEEEETTSCEE
T ss_pred EEECCCCCEEEEEeCCC-----EEEEEeCCCCcEEeeeeecC----CCCcccEEEE-------eCCCCEEEEEcCCCeEE
Confidence 46899999999997776 77778776642 1112222 2334446655 88999999999999999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce-
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC- 157 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~- 157 (358)
+||+.+.+... ...+..|...|.+++|+|+ +.+|++++.|+.|++||++.++.
T Consensus 78 vwd~~~~~~~~-------------------------~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 78 VWTLKGRTWKP-------------------------TLVILRINRAARCVRWAPN-EKKFAVGSGSRVISICYFEQENDW 131 (372)
T ss_dssp EEEEETTEEEE-------------------------EEECCCCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEETTTTE
T ss_pred EEECCCCeeee-------------------------eEEeecCCCceeEEEECCC-CCEEEEEeCCCEEEEEEecCCCcc
Confidence 99997543211 2233468899999999999 67999999999999999988762
Q ss_pred ---eeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcc------------------cCCCccceeeecCCeeeEEE
Q 018293 158 ---NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR------------------ISTHSGFKWAVAADVESLAW 216 (358)
Q Consensus 158 ---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~~~~~i~~~~~ 216 (358)
......|...|.+++|+|++ .++++++.||.|++||++ .++.......+...+.+++|
T Consensus 132 ~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 210 (372)
T 1k8k_C 132 WVCKHIKKPIRSTVLSLDWHPNS-VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF 210 (372)
T ss_dssp EEEEEECTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE
T ss_pred eeeeeeecccCCCeeEEEEcCCC-CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEE
Confidence 23336688999999999998 899999999999999965 23333333467788999999
Q ss_pred cCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCC--CC
Q 018293 217 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN--NQ 294 (358)
Q Consensus 217 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~--~~ 294 (358)
+|+ +.++++++.||.|++||+++. ..+..+..|..+|.+++|+|++ .++++| .|+.|++|++++ ++
T Consensus 211 ~~~-~~~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~~~~~ 278 (372)
T 1k8k_C 211 SAN-GSRVAWVSHDSTVCLADADKK---------MAVATLASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDSAAGK 278 (372)
T ss_dssp CSS-SSEEEEEETTTEEEEEEGGGT---------TEEEEEECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEETTTTE
T ss_pred CCC-CCEEEEEeCCCEEEEEECCCC---------ceeEEEccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccCcCce
Confidence 995 459999999999999999987 7788889999999999999988 777777 899999999987 32
Q ss_pred ceee------------------------------------Eec-CCCCceeEEEEEc-CCC---CeEEEEEccCCeEEEE
Q 018293 295 PSCI------------------------------------ASR-NPKAGAVFSVAFS-EDS---PFVLAIGGSKGKLEIW 333 (358)
Q Consensus 295 ~~~~------------------------------------~~~-~~~~~~v~~~~~~-~~~---~~~l~~~~~dg~i~vw 333 (358)
.... ..+ .+|...|++++|. ++| . +|++|+.||.|++|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~-~l~s~~~Dg~i~~W 357 (372)
T 1k8k_C 279 LSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS-QFCTTGMDGGMSIW 357 (372)
T ss_dssp EEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS-EEEEEETTSEEEEE
T ss_pred EEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee-eEEEecCCCceEEE
Confidence 1000 222 4899999999976 565 7 69999999999999
Q ss_pred EccCCCccc
Q 018293 334 DTLSDAGIS 342 (358)
Q Consensus 334 ~~~~~~~~~ 342 (358)
++.+++.+.
T Consensus 358 ~~~~~~~~~ 366 (372)
T 1k8k_C 358 DVRSLESAL 366 (372)
T ss_dssp EHHHHHHHC
T ss_pred EecChhHhh
Confidence 998866543
No 37
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.6e-39 Score=270.85 Aligned_cols=285 Identities=13% Similarity=0.151 Sum_probs=227.4
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++++|+|+.++++...+ .+..+.... .............+.++.| +|++++|++++ ||.|++|
T Consensus 15 ~~~s~dg~~~~~~~~~~-----~~~~~~~~~----~~~~~~~~~h~~~v~~~~~-------~~~~~~l~~~~-dg~i~iw 77 (337)
T 1gxr_A 15 FHVTADGQMQPVPFPPD-----ALIGPGIPR----HARQINTLNHGEVVCAVTI-------SNPTRHVYTGG-KGCVKVW 77 (337)
T ss_dssp EEECSSSCEEECCCCTT-----SSSSTTCCS----EEEEEEEECCSSCCCEEEE-------CSSSSEEEEEC-BSEEEEE
T ss_pred EEECCCCCEEEeecCCC-----cEeccccCC----ccccceeccCCCceEEEEE-------ecCCcEEEEcC-CCeEEEE
Confidence 46899999999886554 111121111 1111111223444556655 89999999999 9999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCc--ee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK--CN 158 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~ 158 (358)
|+.+......... ....+|...|.+++|+|+ +++|++++.||.|++||+++++ ..
T Consensus 78 ~~~~~~~~~~~~~----------------------~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~ 134 (337)
T 1gxr_A 78 DISHPGNKSPVSQ----------------------LDCLNRDNYIRSCKLLPD-GCTLIVGGEASTLSIWDLAAPTPRIK 134 (337)
T ss_dssp ETTSTTCCSCSEE----------------------EECSCTTSBEEEEEECTT-SSEEEEEESSSEEEEEECCCC--EEE
T ss_pred ECCCCCceeeeec----------------------ccccCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEEECCCCCccee
Confidence 9986543322111 112368899999999999 6799999999999999999887 56
Q ss_pred eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEc
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~ 238 (358)
..+..|...+.+++|+|++ .++++++.||.|++||+++.+.......+...+.+++|+|+ +..+++++.||.|++||+
T Consensus 135 ~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 135 AELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND-GTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp EEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEET
T ss_pred eecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCC-CCEEEEEecCCcEEEEEC
Confidence 6778899999999999998 89999999999999999988776666678899999999995 568999999999999999
Q ss_pred ccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCC
Q 018293 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP 318 (358)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 318 (358)
++. .....+ .+...+.+++|+|++ .+|++++.|+.|++||+++.+ ......|...|.+++|+|+++
T Consensus 213 ~~~---------~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 213 REG---------RQLQQH-DFTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGK 278 (337)
T ss_dssp TTT---------EEEEEE-ECSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSS
T ss_pred CCC---------ceEeee-cCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCC---eEEEcCCccceeEEEECCCCC
Confidence 876 444444 477889999999998 899999999999999999886 345678899999999999999
Q ss_pred eEEEEEccCCeEEEEEccCCCccc
Q 018293 319 FVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 319 ~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
+|++++.||.|++||+.+++.+.
T Consensus 279 -~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 279 -WFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp -EEEEEETTSEEEEEETTTCCEEE
T ss_pred -EEEEecCCCcEEEEECCCCeEEE
Confidence 58899999999999999988763
No 38
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.6e-40 Score=283.50 Aligned_cols=246 Identities=22% Similarity=0.308 Sum_probs=206.3
Q ss_pred ccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEE
Q 018293 61 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 140 (358)
Q Consensus 61 ~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 140 (358)
|+|++++|++|+.||+|+|||+.+++.. ..+..|...|.+++|+|+ +.+|++
T Consensus 74 ~sp~~~~l~s~s~D~~v~iWd~~~~~~~---------------------------~~~~~h~~~v~~~~~s~~-g~~las 125 (380)
T 3iz6_a 74 WTPEKNWIVSASQDGRLIVWNALTSQKT---------------------------HAIKLHCPWVMECAFAPN-GQSVAC 125 (380)
T ss_dssp ECTTSSCEEEEETTSEEEEEETTTTEEE---------------------------EEEECCCTTCCCCEECTT-SSEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCccc---------------------------eEEecCCCCEEEEEECCC-CCEEEE
Confidence 3899999999999999999998754332 244579999999999999 679999
Q ss_pred EEcCCeEEEEECCCC-------ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce-----eeec
Q 018293 141 ASADKQVKIWDVAAG-------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-----WAVA 208 (358)
Q Consensus 141 ~~~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~ 208 (358)
|+.|+.+++||+.+. .....+.+|...+.++.|.|+++..|++++.|++|++||+++++..... ..|.
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 999999999998753 2345678899999999999987678999999999999999988765433 4577
Q ss_pred CCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEE
Q 018293 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288 (358)
Q Consensus 209 ~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 288 (358)
..+.+++|++.+++++++|+.||.|++||++.. ...+..+.+|...|.+++|+|++ .+|++|+.||+|++|
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~--------~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lw 276 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRIT--------SRAVRTYHGHEGDINSVKFFPDG-QRFGTGSDDGTCRLF 276 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTT--------CCCCEEECCCSSCCCEEEECTTS-SEEEEECSSSCEEEE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCC--------CcceEEECCcCCCeEEEEEecCC-CeEEEEcCCCeEEEE
Confidence 889999998867789999999999999999854 26677889999999999999998 899999999999999
Q ss_pred ecCCCCceeeEecCC-----CCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 289 DLSNNQPSCIASRNP-----KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 289 d~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
|+++++......... +...|.+++|+|+|+ +|++|+.||.|++||+.+++.+...
T Consensus 277 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 277 DMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp ETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCCEEEEE
T ss_pred ECCCCcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCceEEEE
Confidence 999987433322211 223488999999999 5889999999999999888766543
No 39
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.7e-39 Score=268.18 Aligned_cols=242 Identities=19% Similarity=0.281 Sum_probs=203.9
Q ss_pred cCC-CceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEE
Q 018293 62 REK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 140 (358)
Q Consensus 62 s~~-~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 140 (358)
+|+ +++|++|+.|++|++|++...+.. .......+.+|...|.+++|+|+ +.+|++
T Consensus 26 ~~~~~~~l~s~s~D~~v~~W~~~~~~~~----------------------~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s 82 (319)
T 3frx_A 26 SAGQPNLLLSASRDKTLISWKLTGDDQK----------------------FGVPVRSFKGHSHIVQDCTLTAD-GAYALS 82 (319)
T ss_dssp CSSCTTEEEEEETTSEEEEEEEEEETTE----------------------EEEEEEEEECCSSCEEEEEECTT-SSEEEE
T ss_pred cCCCccEEEEecCCccEEEecCCCCCcc----------------------ccccceEEeCCcccEEEEEECCC-CCEEEE
Confidence 675 489999999999999998643221 12334466789999999999999 679999
Q ss_pred EEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCC
Q 018293 141 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHA 220 (358)
Q Consensus 141 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 220 (358)
|+.|++|++||+++++.+..+.+|...|.+++|+|++ .++++++.|+.|++||++.. .......|...+.++.|.|..
T Consensus 83 ~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 83 ASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECCC-
T ss_pred EeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC-eEEEEeccCCcEEEEEEccCC
Confidence 9999999999999999999999999999999999998 89999999999999999743 344456788899999999852
Q ss_pred -----CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc
Q 018293 221 -----EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295 (358)
Q Consensus 221 -----~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 295 (358)
...+++++.|+.|++||++.. .....+.+|...|.+++|+|++ .+|++|+.||.|++||+++++.
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~---------~~~~~~~~h~~~v~~~~~sp~g-~~l~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQF---------QIEADFIGHNSNINTLTASPDG-TLIASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTT---------EEEEEECCCCSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEE
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcc---------hhheeecCCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcE
Confidence 348999999999999999876 6677888999999999999998 8999999999999999998874
Q ss_pred eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 296 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 296 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
+..+.. ...|.+++|+|++.+ +++++ ++.+++|++..+..+..
T Consensus 231 --~~~~~~-~~~v~~~~~sp~~~~-la~~~-~~~i~v~~~~~~~~~~~ 273 (319)
T 3frx_A 231 --MYTLSA-QDEVFSLAFSPNRYW-LAAAT-ATGIKVFSLDPQYLVDD 273 (319)
T ss_dssp --EEEEEC-CSCEEEEEECSSSSE-EEEEE-TTEEEEEEETTEEEEEE
T ss_pred --EEEecC-CCcEEEEEEcCCCCE-EEEEc-CCCcEEEEeCcCeeeec
Confidence 444443 467999999999984 76665 45699999987665443
No 40
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.2e-40 Score=276.78 Aligned_cols=246 Identities=22% Similarity=0.338 Sum_probs=197.8
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCC-CCcEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE-FRNIL 138 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l 138 (358)
+|+|+|++||+|+.|++|+|||+.++. ......+.+|...|.+++|+++ .+.+|
T Consensus 20 ~~s~~g~~lasgs~D~~v~lwd~~~~~-------------------------~~~~~~l~gH~~~V~~v~~~~~~~~~~l 74 (316)
T 3bg1_A 20 QMDYYGTRLATCSSDRSVKIFDVRNGG-------------------------QILIADLRGHEGPVWQVAWAHPMYGNIL 74 (316)
T ss_dssp EECGGGCEEEEEETTTEEEEEEEETTE-------------------------EEEEEEEECCSSCEEEEEECCGGGSSCE
T ss_pred eEcCCCCEEEEEeCCCeEEEEEecCCC-------------------------cEEEEEEcCCCccEEEEEeCCCCCCCEE
Confidence 348999999999999999999986432 1123356689999999999863 35799
Q ss_pred EEEEcCCeEEEEECCCC--ceeeeecccccceeeEEEcCCC-CcEEEEEeCCCcEEEEEcccCCC---ccceeeecCCee
Q 018293 139 ASASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHS-PQILLSGSFDRSVVMKDARISTH---SGFKWAVAADVE 212 (358)
Q Consensus 139 ~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~i~ 212 (358)
++|+.|++|++||++++ +....+.+|...|.+++|+|++ ..+|++++.|+.|++||++.... ......|...+.
T Consensus 75 ~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCN 154 (316)
T ss_dssp EEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBC
T ss_pred EEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcc
Confidence 99999999999999887 3566778899999999999982 27899999999999999987532 222345778899
Q ss_pred eEEEcCCC----------------CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC---C
Q 018293 213 SLAWDPHA----------------EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV---P 273 (358)
Q Consensus 213 ~~~~~~~~----------------~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~---~ 273 (358)
+++|+|+. ..++++|+.|+.|++||++.... ......+.+|...|.+++|+|++ .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~------~~~~~~l~~h~~~V~~v~~sp~~~~~~ 228 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ------WKEEQKLEAHSDWVRDVAWAPSIGLPT 228 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC------EEEEECCBCCSSCEEEEECCCCSSCSC
T ss_pred eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc------cceeeecccCCCceEEEEecCCCCCCC
Confidence 99999963 35899999999999999975310 12455678899999999999975 3
Q ss_pred cEEEEEeCCCcEEEEecCCCCc--eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 274 NLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
.+|++++.|++|++||+++... .....+..|...|.+++|+|++++ |++++.||.|++|+...
T Consensus 229 ~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~-las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 229 STIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANI-LAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCC-EEEEESSSCEEEEEECT
T ss_pred ceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCE-EEEEcCCCeEEEEEECC
Confidence 6899999999999999976311 111223457789999999999994 89999999999999864
No 41
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.2e-39 Score=279.75 Aligned_cols=282 Identities=13% Similarity=0.162 Sum_probs=224.9
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCC------CCceEeeceeecCCcccceeeecCCccccCC----C---ce
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGG------DPNLYVHHHIIIPAFPLCMAWLDCPLKDREK----G---NF 67 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----~---~~ 67 (358)
++|+| +.|+++..++ .+++|+..... ....+.. ....+.++.| +|+ + ++
T Consensus 22 ~~~~~--~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~-------~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 22 VSACN--SFTVSCSGDG-----YLKVWDNKLLDNENPKDKSYSHFV----HKSGLHHVDV-------LQAIERDAFELCL 83 (397)
T ss_dssp EEECS--SEEEEEETTS-----EEEEEESBCCTTCCGGGGEEEEEC----CTTCEEEEEE-------EEEEETTTEEEEE
T ss_pred EEecC--CeEEEEcCCC-----EEEEEECCCcccccCCCcceEEec----CCCcEEEEEE-------ecccccCCccccE
Confidence 46778 7888887776 78888877653 1111111 2333456666 677 9 99
Q ss_pred EEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCC-----cccEEEEecC----CCCCcE-
Q 018293 68 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSH-----TDSVLGLAWN----KEFRNI- 137 (358)
Q Consensus 68 l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~----~~~~~~- 137 (358)
|++++.||.|++|++.+.+... ......+..| ...|.+++|+ |+ +.+
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~ 140 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETK----------------------KVIFEKLDLLDSDMKKHSFWALKWGASNDRL-LSHR 140 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTC----------------------CEEEEEECCSCTTGGGSCEEEEEEECCC-----CEE
T ss_pred EEEEcCCCCEEEEEccCCcccc----------------------cccceeecccccccCCCcEEEEEEeeccCCC-CceE
Confidence 9999999999999998654311 1112234456 6899999999 98 567
Q ss_pred EEEEEcCCeEEEEECCC------Cceee-----ee-------cccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCC
Q 018293 138 LASASADKQVKIWDVAA------GKCNL-----TL-------EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 199 (358)
|++++.||.|++||+.+ ++.+. .+ ..|...|.+++|+|++ ++++++.||.|++||+++.+
T Consensus 141 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~ 218 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLR 218 (397)
T ss_dssp EEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTE
T ss_pred EEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCc
Confidence 99999999999999998 66666 66 4488999999999998 89999999999999999887
Q ss_pred Cccceee---e---cCCeeeEEEcCCCCCeEEEEecC---CeEEEEEcccCCCCCCCCCCCccEEEee------------
Q 018293 200 HSGFKWA---V---AADVESLAWDPHAEHSFVVSLED---GTIKGFDIRTAKSDPDSTSQQSSFTLHA------------ 258 (358)
Q Consensus 200 ~~~~~~~---~---~~~i~~~~~~~~~~~~~~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~------------ 258 (358)
....... | ...+.+++|+|+ +.++++++.| |.|++||+++. ..+..+..
T Consensus 219 ~~~~~~~~~~h~~~~~~i~~i~~~~~-~~~l~~~~~d~~~g~i~i~d~~~~---------~~~~~~~~~~~~~~~~~~~~ 288 (397)
T 1sq9_A 219 PLYNFESQHSMINNSNSIRSVKFSPQ-GSLLAIAHDSNSFGCITLYETEFG---------ERIGSLSVPTHSSQASLGEF 288 (397)
T ss_dssp EEEEEECCC---CCCCCEEEEEECSS-TTEEEEEEEETTEEEEEEEETTTC---------CEEEEECBC--------CCB
T ss_pred eeEEEeccccccccCCccceEEECCC-CCEEEEEecCCCCceEEEEECCCC---------cccceeccCccccccccccc
Confidence 7665555 6 889999999995 5689999999 99999999987 67777887
Q ss_pred -cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC------CC---------------CceeEEEEEcCC
Q 018293 259 -HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN------PK---------------AGAVFSVAFSED 316 (358)
Q Consensus 259 -~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~ 316 (358)
|...|.+++|+|++ .+|++++.||.|++||+++++. +..+. .| ...|.+++|+|+
T Consensus 289 ~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 289 AHSSWVMSLSFNDSG-ETLCSAGWDGKLRFWDVKTKER--ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp SBSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE--EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred ccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCce--eEEEecccCcccchhhhhccccccccccCCceeEEEeccc
Confidence 99999999999998 8999999999999999998874 44455 56 899999999999
Q ss_pred C----------CeEEEEEccCCeEEEEEccCCC
Q 018293 317 S----------PFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 317 ~----------~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
+ + +|++++.||.|++|++.+++
T Consensus 366 g~~~~~~~~~~~-~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 366 GWRSGMGADLNE-SLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTSBSTTCTTSC-EEEEEETTTEEEEEEEEC--
T ss_pred cccccccccccc-eEEEecCCCcEEEEEcCCCC
Confidence 8 5 69999999999999998764
No 42
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.6e-38 Score=275.58 Aligned_cols=265 Identities=19% Similarity=0.337 Sum_probs=217.3
Q ss_pred eeecCCcccceeeecCCccccCC-CceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCC
Q 018293 42 HIIIPAFPLCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS 120 (358)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (358)
.......+.+++| +|+ +++||+|+.||.|++|++........ ..........+.+
T Consensus 124 ~~~h~~~v~~l~~-------~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-----------------~~~~~~~~~~~~~ 179 (430)
T 2xyi_A 124 KINHEGEVNRARY-------MPQNACVIATKTPSSDVLVFDYTKHPSKPE-----------------PSGECQPDLRLRG 179 (430)
T ss_dssp EEEESSCCSEEEE-------ETTEEEEEEEECSSSCEEEEEGGGSCSSCC-----------------TTCCCCCSEEEEC
T ss_pred EEcCCCcEEEEEE-------CCCCCcEEEEECCCCcEEEEECCCcccccC-----------------ccccCCCcEEecC
Confidence 3444555666666 676 78999999999999999975321110 0011334456668
Q ss_pred CcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce-------eeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEE
Q 018293 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC-------NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMK 193 (358)
Q Consensus 121 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 193 (358)
|...|++++|+|++..+|++|+.||.|++||+.++.. ...+..|...|.+++|+|++..+|++++.||.|++|
T Consensus 180 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~ 259 (430)
T 2xyi_A 180 HQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIW 259 (430)
T ss_dssp CSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred CCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEE
Confidence 9999999999999555999999999999999987422 455678999999999999666899999999999999
Q ss_pred EcccCC---CccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecC
Q 018293 194 DARIST---HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 270 (358)
Q Consensus 194 d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 270 (358)
|+++.. .......+...|++++|+|++..++++|+.||.|++||++.. ..++..+..|...|.+++|+|
T Consensus 260 d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~--------~~~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 260 DTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL--------KLKLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp ETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT--------TSCSEEEECCSSCEEEEEECS
T ss_pred ECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC--------CCCeEEeecCCCCEEEEEECC
Confidence 999873 444445788899999999988778999999999999999975 266788889999999999999
Q ss_pred CCCcEEEEEeCCCcEEEEecCCCC------------ceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 271 LVPNLLATGSTDKMVKLWDLSNNQ------------PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 271 ~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
++..+|++++.|+.|++||+.... +..+....+|...|.+++|+|++++++++++.||.|++|++...
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 987789999999999999998722 23667788899999999999999977999999999999999754
No 43
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.9e-38 Score=273.80 Aligned_cols=281 Identities=21% Similarity=0.369 Sum_probs=224.4
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~ 81 (358)
++++ +++|++|. ++ .|++|+...+....++..+ .....+.|++| +|+|++||+|+.||.|+|||
T Consensus 112 ~wS~-~n~lAvgl-d~-----tV~lWd~~tg~~~~~~~~~--~~~~~V~sv~f-------spdg~~lasgs~Dg~v~iWd 175 (420)
T 4gga_A 112 DWSS-GNVLAVAL-DN-----SVYLWSASSGDILQLLQME--QPGEYISSVAW-------IKEGNYLAVGTSSAEVQLWD 175 (420)
T ss_dssp EECT-TSEEEEEE-TT-----EEEEEETTTCCEEEEEECC--STTCCEEEEEE-------CTTSSEEEEEETTSCEEEEE
T ss_pred EECC-CCEEEEEe-CC-----EEEEEECCCCCEEEEEEec--CCCCcEEEEEE-------CCCCCEEEEEECCCeEEEEE
Confidence 4565 46777774 66 8999998876333333211 12233456666 89999999999999999999
Q ss_pred cccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC-ceeee
Q 018293 82 LDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG-KCNLT 160 (358)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~ 160 (358)
+.+++.+ ..+.+|...+.++++++ .+|++|+.|+.+++||.... ..+..
T Consensus 176 ~~~~~~~---------------------------~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~ 225 (420)
T 4gga_A 176 VQQQKRL---------------------------RNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVAT 225 (420)
T ss_dssp TTTTEEE---------------------------EEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred cCCCcEE---------------------------EEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEE
Confidence 9764432 34567999999999874 48999999999999998865 45677
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc----cceeeecCCeeeEEEcCCCCCeEEEE--ecCCeEE
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS----GFKWAVAADVESLAWDPHAEHSFVVS--LEDGTIK 234 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~--~~dg~i~ 234 (358)
+.+|...+..+.|+|++ .++++++.|+.+++||...++.. .....+...|.+++|+|.+..+++++ +.|+.|+
T Consensus 226 ~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~ 304 (420)
T 4gga_A 226 LSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 304 (420)
T ss_dssp EECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEE
T ss_pred ecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEE
Confidence 88999999999999999 89999999999999999876542 23445778899999999888888765 4799999
Q ss_pred EEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe--CCCcEEEEecCCCCceeeEecCCCCceeEEEE
Q 018293 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVA 312 (358)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~ 312 (358)
+||++++ .....+.. ...+.++.|+|++ ..+++++ .|+.|+|||+++++ .+..+.+|.+.|++++
T Consensus 305 iwd~~t~---------~~~~~~~~-~~~v~~~~~~~~~-~~lv~~sg~~d~~I~iwd~~~~~--~v~~l~gH~~~V~~l~ 371 (420)
T 4gga_A 305 IWNVCSG---------ACLSAVDA-HSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMA--KVAELKGHTSRVLSLT 371 (420)
T ss_dssp EEETTTT---------EEEEEEEC-SSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCC--EEEEECCCSSCEEEEE
T ss_pred EEeCCcc---------ccceeecc-ccceeeeeecCCC-CeEEEEEecCCCEEEEEECCCCc--EEEEEcCCCCCEEEEE
Confidence 9999987 55666654 4578899999998 5555544 69999999999988 5778889999999999
Q ss_pred EcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 313 FSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 313 ~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
|+|+|++ |++|+.||+|+|||+.......+
T Consensus 372 ~spdg~~-l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 372 MSPDGAT-VASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp ECTTSSC-EEEEETTTEEEEECCSCSSCC--
T ss_pred EcCCCCE-EEEEecCCeEEEEECCCCCccch
Confidence 9999995 89999999999999987665544
No 44
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.1e-39 Score=270.94 Aligned_cols=243 Identities=21% Similarity=0.291 Sum_probs=197.1
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 142 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 142 (358)
+++++|++|+.|++|++||+...+... ........+.+|...|.+++|+|+ +.++++|+
T Consensus 37 ~d~~~l~sgs~D~~v~iWd~~~~~~~~--------------------~~~~~~~~l~~h~~~V~~~~~~~~-~~~l~s~s 95 (343)
T 2xzm_R 37 EDSPVLISGSRDKTVMIWKLYEEEQNG--------------------YFGIPHKALTGHNHFVSDLALSQE-NCFAISSS 95 (343)
T ss_dssp CCCCEEEEEETTSCEEEEEECSSCCSS--------------------BSEEEEEEECCCSSCEEEEEECSS-TTEEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCcCCccc--------------------ccccccchhccCCCceEEEEECCC-CCEEEEEc
Confidence 489999999999999999987533211 112233456789999999999999 67999999
Q ss_pred cCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc--ceeeecCCeeeEEEcCCC
Q 018293 143 ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG--FKWAVAADVESLAWDPHA 220 (358)
Q Consensus 143 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~ 220 (358)
.|++|++||+++++.+..+.+|...|.+++|+|++ .++++++.|+.|++||+....... ....+...+.+++|+|++
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccc
Confidence 99999999999999999999999999999999999 899999999999999997432211 112567789999999965
Q ss_pred C---------CeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecC
Q 018293 221 E---------HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291 (358)
Q Consensus 221 ~---------~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~ 291 (358)
. .++++++.||.|++||.. . .....+..|...|.+++|+|++ .+|++|+.||.|++||+.
T Consensus 175 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~---------~~~~~~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 175 KSANKVQPFAPYFASVGWDGRLKVWNTN-F---------QIRYTFKAHESNVNHLSISPNG-KYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CSCSCCCSSCCEEEEEETTSEEEEEETT-T---------EEEEEEECCSSCEEEEEECTTS-SEEEEEETTCEEEEEESS
T ss_pred ccccccCCCCCEEEEEcCCCEEEEEcCC-C---------ceeEEEcCccccceEEEECCCC-CEEEEEcCCCeEEEEECC
Confidence 2 589999999999999943 2 5567788999999999999998 899999999999999995
Q ss_pred CCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 292 NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 292 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
.... ....+ .+...|.+++|+|+++ +++ ++.|+.|++|++.+++...
T Consensus 244 ~~~~-~~~~~-~~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 244 NLTY-PQREF-DAGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp CCSS-CSEEE-ECSSCEEEEEECSSSC-EEE-EEESSCEEEEESSSCCSCS
T ss_pred CCcc-cceee-cCCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCCCCCCc
Confidence 4432 12222 2345699999999998 465 4568889999998876543
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6e-39 Score=275.71 Aligned_cols=282 Identities=14% Similarity=0.147 Sum_probs=213.9
Q ss_pred CcccCCC-cEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccC-CCceEEecCCCCeEE
Q 018293 1 MTINPND-AVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMAVGSMEPAIE 78 (358)
Q Consensus 1 l~~~p~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~ 78 (358)
++|+|++ ++|+++..++ .+.+|+...+.....+.. ......+.++.| +| ++++|++|+.||.|+
T Consensus 79 ~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~--~~h~~~v~~~~~-------~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSKGG-----DIILWDYDVQNKTSFIQG--MGPGDAITGMKF-------NQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEECSSCTTEEEEEEBTS-----CEEEEETTSTTCEEEECC--CSTTCBEEEEEE-------ETTEEEEEEEEETTTEEE
T ss_pred EEECCCCCCEEEEEcCCC-----eEEEEeCCCcccceeeec--CCcCCceeEEEe-------CCCCCCEEEEEeCCCEEE
Confidence 4689999 8999998877 788888876533222211 112334446666 78 689999999999999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCcee
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN 158 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 158 (358)
+||+.+. .. .......+|...|.+++|+|+ +.+|++|+.|+.|++||+ +++.+
T Consensus 145 iwd~~~~-~~------------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~-~~~~~ 197 (383)
T 3ei3_B 145 LRDFSGS-VI------------------------QVFAKTDSWDYWYCCVDVSVS-RQMLATGDSTGRLLLLGL-DGHEI 197 (383)
T ss_dssp EEETTSC-EE------------------------EEEECCCCSSCCEEEEEEETT-TTEEEEEETTSEEEEEET-TSCEE
T ss_pred EEECCCC-ce------------------------EEEeccCCCCCCeEEEEECCC-CCEEEEECCCCCEEEEEC-CCCEE
Confidence 9999731 11 111122346688999999999 679999999999999998 57788
Q ss_pred eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC---ccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEE
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH---SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i 235 (358)
..+..|...|.+++|+|++..++++++.|+.|++||+++.+. ......+...+.+++|+|.++.++++++.|+.|++
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 899999999999999999944999999999999999998432 22234688999999999933458999999999999
Q ss_pred EEcccCCCCCCCCCCCccEEEeecC-----------------CceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceee
Q 018293 236 FDIRTAKSDPDSTSQQSSFTLHAHD-----------------KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298 (358)
Q Consensus 236 ~d~~~~~~~~~~~~~~~~~~~~~~~-----------------~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 298 (358)
||+++.. ....+..|. ..+..++++|++ .+ +++.|+.|++||+.+++....
T Consensus 278 wd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iwd~~~~~~~~~ 345 (383)
T 3ei3_B 278 YSSYDWS---------KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIYDANSGGLVHQ 345 (383)
T ss_dssp EETTBTT---------SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEEETTTCCEEEE
T ss_pred EECCCCc---------cccccccccccccccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEEecCCCceeee
Confidence 9999873 333333332 344456677766 44 777899999999999885333
Q ss_pred EecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 299 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
.....|...+..++|+|+++ +|++|+ ||.|++||+++
T Consensus 346 l~~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 346 LRDPNAAGIISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp ECBTTBCSCCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred ecCCCCCceEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 33333567788889999999 478886 99999999875
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-38 Score=265.45 Aligned_cols=245 Identities=25% Similarity=0.405 Sum_probs=206.6
Q ss_pred ccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEE
Q 018293 61 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 140 (358)
Q Consensus 61 ~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 140 (358)
|+|++++|++|+.||.|++|++.+++. ...+.+|...|.+++|+|+ +++|++
T Consensus 31 ~s~~~~~l~s~~~dg~i~iw~~~~~~~---------------------------~~~~~~h~~~v~~~~~~~~-~~~l~s 82 (312)
T 4ery_A 31 FSPNGEWLASSSADKLIKIWGAYDGKF---------------------------EKTISGHKLGISDVAWSSD-SNLLVS 82 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCE---------------------------EEEECCCSSCEEEEEECTT-SSEEEE
T ss_pred ECCCCCEEEEeeCCCeEEEEeCCCccc---------------------------chhhccCCCceEEEEEcCC-CCEEEE
Confidence 389999999999999999999865332 2245579999999999999 679999
Q ss_pred EEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCC
Q 018293 141 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHA 220 (358)
Q Consensus 141 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 220 (358)
|+.|+.|++||+++++++..+.+|...|.+++|+|++ .++++++.|+.|++||+++++.......+...+.+++|+|+
T Consensus 83 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~- 160 (312)
T 4ery_A 83 ASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD- 160 (312)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-
T ss_pred ECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCC-
Confidence 9999999999999999999999999999999999998 89999999999999999988877666678889999999995
Q ss_pred CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeE
Q 018293 221 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299 (358)
Q Consensus 221 ~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 299 (358)
+.++++++.||.|++||+++. ..+..+ ..+...+..++|+|++ .+|++++.|+.|++||+++++ ...
T Consensus 161 ~~~l~~~~~d~~i~~wd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~--~~~ 228 (312)
T 4ery_A 161 GSLIVSSSYDGLCRIWDTASG---------QCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGK--CLK 228 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTC---------CEEEEECCSSCCCEEEEEECTTS-SEEEEEETTTEEEEEETTTTE--EEE
T ss_pred CCEEEEEeCCCcEEEEECCCC---------ceeeEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCc--EEE
Confidence 558999999999999999876 444444 3456789999999998 899999999999999999887 455
Q ss_pred ecCCCCceeE--EEEEc-CCCCeEEEEEccCCeEEEEEccCCCccccccccC
Q 018293 300 SRNPKAGAVF--SVAFS-EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 300 ~~~~~~~~v~--~~~~~-~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
.+.+|..... ...++ +++. ++++|+.||.|++||+.+++.+..+..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~ 279 (312)
T 4ery_A 229 TYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHT 279 (312)
T ss_dssp EECSSCCSSSCCCEEEECSSSC-EEEECCTTSCEEEEETTTCCEEEEECCCS
T ss_pred EEEecCCceEEEEEEEEeCCCc-EEEEECCCCEEEEEECCCchhhhhhhccC
Confidence 5666654322 23444 5666 58999999999999999988776655443
No 47
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-39 Score=279.16 Aligned_cols=281 Identities=17% Similarity=0.290 Sum_probs=227.7
Q ss_pred CcccCCCc-EEEEEEecCCCceEEEEEEec----cCCCC------CceEeeceee------cCCcccceeeecCCccccC
Q 018293 1 MTINPNDA-VIVCARNEDDVSHLEVYILEE----SDGGD------PNLYVHHHII------IPAFPLCMAWLDCPLKDRE 63 (358)
Q Consensus 1 l~~~p~~~-~l~~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~~~------~~~~~~~~~~~~~~~~~s~ 63 (358)
++|+|+++ +|+++..++ .+.+|+. ..+.. ...+.+.... ....+.++.| +|
T Consensus 51 ~~~s~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~ 118 (425)
T 1r5m_A 51 STWNPLDESILAYGEKNS-----VARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW-------SH 118 (425)
T ss_dssp EEECSSCTTEEEEEETBT-----EEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE-------CT
T ss_pred EEECCCCCcEEEEecCCc-----eEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE-------cC
Confidence 46899999 999997776 6777776 44321 1111110000 1223445555 89
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 143 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 143 (358)
++++|++|+.||.|++||.. +. ....+.+|...|.+++|+|+ +.+|++++.
T Consensus 119 ~~~~l~~~~~dg~i~i~~~~-~~---------------------------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~ 169 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWNKT-GA---------------------------LLNVLNFHRAPIVSVKWNKD-GTHIISMDV 169 (425)
T ss_dssp TSSEEEEEETTSCEEEEETT-SC---------------------------EEEEECCCCSCEEEEEECTT-SSEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEeCC-CC---------------------------eeeeccCCCccEEEEEECCC-CCEEEEEec
Confidence 99999999999999999932 11 22244579999999999999 679999999
Q ss_pred CCeEEEEECCCCceeeeecccccc---------------eeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeec
Q 018293 144 DKQVKIWDVAAGKCNLTLEHHTDK---------------VQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA 208 (358)
Q Consensus 144 dg~v~iwd~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 208 (358)
|+.|++||+.+++.+..+..+... +.+++|+|++ .+++++.+|.|++||+++.+.......+.
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~~~~~~~ 247 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTGKLIGHH 247 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSEEECCCS
T ss_pred CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceeeeeccCC
Confidence 999999999999999888877776 9999999975 58899999999999999988777667788
Q ss_pred CCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEE
Q 018293 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288 (358)
Q Consensus 209 ~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 288 (358)
..+.+++|+|+ +.++++++.||.|++||+++. .....+..|...|.+++|+|++ ++++++.|+.|++|
T Consensus 248 ~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~ 315 (425)
T 1r5m_A 248 GPISVLEFNDT-NKLLLSASDDGTLRIWHGGNG---------NSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLW 315 (425)
T ss_dssp SCEEEEEEETT-TTEEEEEETTSCEEEECSSSB---------SCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEE
T ss_pred CceEEEEECCC-CCEEEEEcCCCEEEEEECCCC---------ccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEE
Confidence 99999999995 459999999999999999987 6778888899999999999986 89999999999999
Q ss_pred ecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
|+++++ .+..+..|...|.+++|+|+++ +|++++.||.|++||+.+++
T Consensus 316 d~~~~~--~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 316 SLKQNT--LLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp ETTTTE--EEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHH
T ss_pred ECCCCc--EeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCc
Confidence 999887 4556667888999999999999 58899999999999998876
No 48
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-39 Score=282.21 Aligned_cols=261 Identities=11% Similarity=0.084 Sum_probs=198.1
Q ss_pred cccceeeecCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEE
Q 018293 48 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 127 (358)
Q Consensus 48 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 127 (358)
.+.+++|.|. ..+++++.+||+|+.||+|+|||+.+......... ....+...+.+|...|++
T Consensus 209 ~V~~v~wsp~-~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~----------------~~~~p~~~l~~h~~~v~s 271 (524)
T 2j04_B 209 EVWDLKWHEG-CHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK----------------MCEKPSLTLSLADSLITT 271 (524)
T ss_dssp SEEEEEECSS-CCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE----------------CCCSCSEEECCTTTCEEE
T ss_pred cEEEEEECCC-CCCCCCCceEEEEecCCeEEEEEcCCCccccccce----------------eecCceEEEEcCCCCEEE
Confidence 3456777431 11234578999999999999999976532210000 001223356789999999
Q ss_pred EecCCCCCcEEEEEEcCCeEEEEECCCCc-eeeeecccccceeeE--EEcCCCCcEEEEEeCCCcEEEEEcccCCCccce
Q 018293 128 LAWNKEFRNILASASADKQVKIWDVAAGK-CNLTLEHHTDKVQAV--AWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 204 (358)
Q Consensus 128 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 204 (358)
++|+++ . .|++|+.||+|++||+++++ +...+.+|...|.++ .|+|++..+|++++.|++|++||+++.+.....
T Consensus 272 v~~s~~-~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~ 349 (524)
T 2j04_B 272 FDFLSP-T-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT 349 (524)
T ss_dssp EEESSS-S-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE
T ss_pred EEecCC-C-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc
Confidence 999986 4 89999999999999999764 455688999999999 567765478999999999999999987765545
Q ss_pred eeecC--CeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC
Q 018293 205 WAVAA--DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 282 (358)
Q Consensus 205 ~~~~~--~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 282 (358)
..+.. .+.+++|+|++ ..+++++.|+.|++||++.. .....+.+|...|++++|+|++ .+|++|+.|
T Consensus 350 ~~~~~~~~v~~v~fsp~~-~~l~s~~~d~tv~lwd~~~~---------~~~~~l~gH~~~V~sva~Sp~g-~~l~Sgs~D 418 (524)
T 2j04_B 350 VSRFRGSNLVPVVYCPQI-YSYIYSDGASSLRAVPSRAA---------FAVHPLVSRETTITAIGVSRLH-PMVLAGSAD 418 (524)
T ss_dssp EEECSCCSCCCEEEETTT-TEEEEECSSSEEEEEETTCT---------TCCEEEEECSSCEEEEECCSSC-CBCEEEETT
T ss_pred ccccccCcccceEeCCCc-CeEEEeCCCCcEEEEECccc---------ccceeeecCCCceEEEEeCCCC-CeEEEEECC
Confidence 55543 47899999964 47999999999999999987 6667888999999999999998 789999999
Q ss_pred CcEEEEecCCCCc------------------------------------------eeeEecCCCCceeEEEEEcCCCC--
Q 018293 283 KMVKLWDLSNNQP------------------------------------------SCIASRNPKAGAVFSVAFSEDSP-- 318 (358)
Q Consensus 283 g~i~i~d~~~~~~------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~-- 318 (358)
|+|++||+..... .....+.+|...|.+++|+|+++
T Consensus 419 gtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~ 498 (524)
T 2j04_B 419 GSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGG 498 (524)
T ss_dssp TEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTT
T ss_pred CEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCcc
Confidence 9999998632100 01223345778899999999953
Q ss_pred eEEEEEccCCeEEEEEccCC
Q 018293 319 FVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 319 ~~l~~~~~dg~i~vw~~~~~ 338 (358)
.++|+|+.||.|+||++.-.
T Consensus 499 ~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 499 KCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp TEEEEECTTSEEEEEECSCC
T ss_pred HHHHhhccCceEEEEEcccc
Confidence 25999999999999998653
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3e-38 Score=268.87 Aligned_cols=309 Identities=11% Similarity=0.108 Sum_probs=210.4
Q ss_pred CcccCCCcEEEEEEecCCCc--eEEEEEEeccCCCCC---ceEeeceeecC---CcccceeeecC--CccccCCCceEEe
Q 018293 1 MTINPNDAVIVCARNEDDVS--HLEVYILEESDGGDP---NLYVHHHIIIP---AFPLCMAWLDC--PLKDREKGNFMAV 70 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~--~~~~s~~~~~l~~ 70 (358)
++|+|++++|++|+.+.... ..++.+|+...+... .+...+...+. ..+.++.+-.- ....++++..|++
T Consensus 20 v~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s 99 (365)
T 4h5i_A 20 AKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNENSTKITQ 99 (365)
T ss_dssp EEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCCHHHHHH
T ss_pred EEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCCccEEEE
Confidence 47999999999986533111 124555554432211 12222222221 12334432100 0001222333445
Q ss_pred cCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE--EEEcCCeEE
Q 018293 71 GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA--SASADKQVK 148 (358)
Q Consensus 71 g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~--s~~~dg~v~ 148 (358)
|+.|+.+++|++.......... ..........+...+.+++|+|+ +++++ +++.|++|+
T Consensus 100 ~~~d~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~fSpD-g~~la~as~~~d~~i~ 160 (365)
T 4h5i_A 100 GKGNKHLRKFKYDKVNDQLEFL------------------TSVDFDASTNADDYTKLVYISRE-GTVAAIASSKVPAIMR 160 (365)
T ss_dssp TSCCCCEEEEEEETTTTEEEEE------------------EEECSSCCCCTTCCEEEEEECTT-SSCEEEEESCSSCEEE
T ss_pred ecCCCcEEEEEecCCCceEEEe------------------eeeceeecCCcccCEEEEEEcCC-CCEEEEEECCCCCEEE
Confidence 5678899999987543321110 01111122345667999999999 45655 445789999
Q ss_pred EEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc--ceeeecCCeeeEEEcCCCCCeEEE
Q 018293 149 IWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG--FKWAVAADVESLAWDPHAEHSFVV 226 (358)
Q Consensus 149 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~ 226 (358)
+||+++++++..+. |...|.+++|+|++ .++++++ ++.+.+|+..+++... ....+...+.+++|+|++ ..+++
T Consensus 161 iwd~~~~~~~~~~~-~~~~V~~v~fspdg-~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg-~~l~~ 236 (365)
T 4h5i_A 161 IIDPSDLTEKFEIE-TRGEVKDLHFSTDG-KVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADD-TVLIA 236 (365)
T ss_dssp EEETTTTEEEEEEE-CSSCCCEEEECTTS-SEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETT-EEEEE
T ss_pred EeECCCCcEEEEeC-CCCceEEEEEccCC-ceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCC-CEEEE
Confidence 99999999988886 77889999999999 8888887 4556777766665432 223466789999999965 57888
Q ss_pred EecCC----eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEe-c
Q 018293 227 SLEDG----TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS-R 301 (358)
Q Consensus 227 ~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~ 301 (358)
++.|+ .++.||+....... .....+..|..+|++++|+|++ ++|++|+.|+.|+|||+++++ ++.. .
T Consensus 237 ~s~d~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd~~~~~--~~~~~~ 308 (365)
T 4h5i_A 237 ASLKKGKGIVLTKISIKSGNTSV-----LRSKQVTNRFKGITSMDVDMKG-ELAVLASNDNSIALVKLKDLS--MSKIFK 308 (365)
T ss_dssp EEESSSCCEEEEEEEEETTEEEE-----EEEEEEESSCSCEEEEEECTTS-CEEEEEETTSCEEEEETTTTE--EEEEET
T ss_pred EecCCcceeEEeecccccceecc-----eeeeeecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEECCCCc--EEEEec
Confidence 87776 68889987652100 2245677889999999999998 899999999999999999987 4544 5
Q ss_pred CCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcc
Q 018293 302 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 302 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 341 (358)
.+|..+|++++|+|||+ +||+|+.|++|+||++......
T Consensus 309 ~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~~~~ 347 (365)
T 4h5i_A 309 QAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLNYAN 347 (365)
T ss_dssp TSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTTTTC
T ss_pred CcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCCCcC
Confidence 78999999999999999 5999999999999999755433
No 50
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-38 Score=269.76 Aligned_cols=282 Identities=13% Similarity=0.164 Sum_probs=228.9
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|++++|+++..++ .+.+|+...+.....+..| ...+.++.| +|++++|++++.||.|++|
T Consensus 38 ~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 38 VKYNKEGDLLFSCSKDS-----SASVWYSLNGERLGTLDGH----TGTIWSIDV-------DCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEECTTSCEEEEEESSS-----CEEEEETTTCCEEEEECCC----SSCEEEEEE-------CTTSSEEEEEETTTEEEEE
T ss_pred EEEcCCCCEEEEEeCCC-----EEEEEeCCCchhhhhhhhc----CCcEEEEEE-------cCCCCEEEEEeCCCeEEEE
Confidence 47899999999998777 7888887765333333223 233345555 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcC-----CeEEEEECCCC
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD-----KQVKIWDVAAG 155 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~ 155 (358)
|+.+++... .+. |...|.+++|+|+ +.++++++.+ +.|++||+...
T Consensus 102 d~~~~~~~~---------------------------~~~-~~~~v~~~~~~~~-~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 102 DVSNGQCVA---------------------------TWK-SPVPVKRVEFSPC-GNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp ETTTCCEEE---------------------------EEE-CSSCEEEEEECTT-SSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred ECCCCcEEE---------------------------Eee-cCCCeEEEEEccC-CCEEEEecCCccCCCCEEEEEEecCC
Confidence 997644332 122 7788999999999 6799999998 99999999765
Q ss_pred c-----------eeeeeccccc--ceeeEEEcCCCCcEEEEEeCCCcEEEEEccc-CCCccceeeecCCeeeEEEcCCCC
Q 018293 156 K-----------CNLTLEHHTD--KVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHSGFKWAVAADVESLAWDPHAE 221 (358)
Q Consensus 156 ~-----------~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~ 221 (358)
. ....+..|.. .+.+++|+|++ .++++++.||.|++||+++ .........+...+.+++|+|+ +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~ 230 (369)
T 3zwl_B 153 SATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPD-L 230 (369)
T ss_dssp TTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTT-S
T ss_pred ccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCC-C
Confidence 4 2334444555 89999999998 8999999999999999998 4555555668889999999995 5
Q ss_pred CeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC--------------cEEE
Q 018293 222 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK--------------MVKL 287 (358)
Q Consensus 222 ~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg--------------~i~i 287 (358)
.++++++.||.|++||+++. .....+. +...+.+++|+|++ .++++++.++ .+++
T Consensus 231 ~~l~~~~~d~~i~v~d~~~~---------~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (369)
T 3zwl_B 231 TYFITSSRDTNSFLVDVSTL---------QVLKKYE-TDCPLNTAVITPLK-EFIILGGGQEAKDVTTTSANEGKFEARF 299 (369)
T ss_dssp SEEEEEETTSEEEEEETTTC---------CEEEEEE-CSSCEEEEEECSSS-SEEEEEECCC-------------CEEEE
T ss_pred CEEEEecCCceEEEEECCCC---------ceeeeec-CCCCceeEEecCCC-ceEEEeecCCCceEEEEecCCCcceeEE
Confidence 68999999999999999886 5555555 77889999999998 8899988888 8999
Q ss_pred EecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 288 WDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
||..+++ ....+..|...|.+++|+|+++ +|++++.||.|++|++.++....+
T Consensus 300 ~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 300 YHKIFEE--EIGRVQGHFGPLNTVAISPQGT-SYASGGEDGFIRLHHFEKSYFDFK 352 (369)
T ss_dssp EETTTCC--EEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEEECHHHHTCC
T ss_pred EecCCCc--chhheecccCcEEEEEECCCCC-EEEEEcCCCeEEEEECccccchhH
Confidence 9999988 5666778999999999999999 589999999999999987665443
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-39 Score=279.60 Aligned_cols=284 Identities=11% Similarity=0.204 Sum_probs=205.4
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCC--CCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDG--GDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 78 (358)
++|+|++++|+++..++ .+.+|+...+ .....+..| ...+.++.| +|++++|++|+.||.|+
T Consensus 17 ~~~s~~g~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~-------s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTATN-----QVELYEQDGNGWKHARTFSDH----DKIVTCVDW-------APKSNRIVTCSQDRNAY 80 (377)
T ss_dssp CEECSSSSEEECCCSSS-----CBCEEEEETTEEEECCCBCCC----SSCEEEEEE-------CTTTCCEEEEETTSSEE
T ss_pred EEECCCCCEEEEecCCC-----EEEEEEccCCceEEEEEEecC----CceEEEEEE-------eCCCCEEEEEeCCCeEE
Confidence 57999999999997765 5566665543 112222222 233345555 89999999999999999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCc--
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-- 156 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-- 156 (358)
+||+.+++.. .....+.+|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 81 vwd~~~~~~~------------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~ 135 (377)
T 3dwl_C 81 VYEKRPDGTW------------------------KQTLVLLRLNRAATFVRWSPN-EDKFAVGSGARVISVCYFEQENDW 135 (377)
T ss_dssp EC------CC------------------------CCEEECCCCSSCEEEEECCTT-SSCCEEEESSSCEEECCC-----C
T ss_pred EEEcCCCCce------------------------eeeeEecccCCceEEEEECCC-CCEEEEEecCCeEEEEEECCcccc
Confidence 9999865411 122345579999999999999 6799999999999999999887
Q ss_pred -eeeeecc-cccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCC------------------CccceeeecCCeeeEEE
Q 018293 157 -CNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST------------------HSGFKWAVAADVESLAW 216 (358)
Q Consensus 157 -~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------------------~~~~~~~~~~~i~~~~~ 216 (358)
....+.. |...|.+++|+|++ .+|++++.|+.|++||++... ..... .|...|.+++|
T Consensus 136 ~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 213 (377)
T 3dwl_C 136 WVSKHLKRPLRSTILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF 213 (377)
T ss_dssp CCCEEECSSCCSCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE
T ss_pred eeeeEeecccCCCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE
Confidence 4677777 99999999999998 899999999999999986322 22222 67788999999
Q ss_pred cCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce
Q 018293 217 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 296 (358)
+|+ +.++++++.||.|++||+++..... ..+..+..|...|.+++|+|++ .+|++|+.++.+ +|+.......
T Consensus 214 sp~-~~~l~~~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~~~~~~~ 285 (377)
T 3dwl_C 214 SPS-GNALAYAGHDSSVTIAYPSAPEQPP-----RALITVKLSQLPLRSLLWANES-AIVAAGYNYSPI-LLQGNESGWA 285 (377)
T ss_dssp CTT-SSCEEEEETTTEEC-CEECSTTSCE-----EECCCEECSSSCEEEEEEEETT-EEEEEESSSSEE-EECCCC---C
T ss_pred CCC-CCEEEEEeCCCcEEEEECCCCCCcc-----eeeEeecCCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEeCCCceE
Confidence 995 4589999999999999999872100 1167788899999999999998 888888766555 7766522100
Q ss_pred e----------------------------e------E----------------ecCCCCceeEEEEEcCCCCe---EEEE
Q 018293 297 C----------------------------I------A----------------SRNPKAGAVFSVAFSEDSPF---VLAI 323 (358)
Q Consensus 297 ~----------------------------~------~----------------~~~~~~~~v~~~~~~~~~~~---~l~~ 323 (358)
. . . ....|...|+++++.+.... .|++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s 365 (377)
T 3dwl_C 286 HTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTS 365 (377)
T ss_dssp CSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEE
T ss_pred EEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEe
Confidence 0 0 0 01138899999998765432 4899
Q ss_pred EccCCeEEEEEc
Q 018293 324 GGSKGKLEIWDT 335 (358)
Q Consensus 324 ~~~dg~i~vw~~ 335 (358)
|+.||.|++||+
T Consensus 366 ~g~Dg~i~iWdl 377 (377)
T 3dwl_C 366 SGTDGRVVLWTL 377 (377)
T ss_dssp EETTSEEEEECC
T ss_pred ecCCCcEEEecC
Confidence 999999999985
No 52
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-38 Score=266.88 Aligned_cols=239 Identities=22% Similarity=0.358 Sum_probs=189.6
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceecccccc--CCCcccEEEEecCCCCCcEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKK--GSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+|+ +||+|+.|+.|++||+...... ....+ .+|...|.+++|+|+ +.+|+
T Consensus 23 s~~--~las~~~D~~i~lw~~~~~~~~-------------------------~~~~~~~~~h~~~v~~v~~sp~-~~~la 74 (330)
T 2hes_X 23 SQG--ILATGSTDRKIKLVSVKYDDFT-------------------------LIDVLDETAHKKAIRSVAWRPH-TSLLA 74 (330)
T ss_dssp ETT--EEEEEESSSCEEEEECSSSCCE-------------------------EEEEECTTCCCSCEEEEEECTT-SSEEE
T ss_pred CCC--EEEEEcCCCEEEEEEecCCCeE-------------------------EEEEEecCCccCCEEEEEECCC-CCEEE
Confidence 665 9999999999999999743211 11112 249999999999999 67999
Q ss_pred EEEcCCeEEEEECCC-------CceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCC----Cccceeeec
Q 018293 140 SASADKQVKIWDVAA-------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST----HSGFKWAVA 208 (358)
Q Consensus 140 s~~~dg~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~ 208 (358)
+|+.|++|++||++. .+++..+.+|...|.+++|+|++ ++|++++.|++|++||++... .......|.
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC
Confidence 999999999999853 35667788999999999999998 899999999999999995432 223345688
Q ss_pred CCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC-CcEEEEEeCCCcEEE
Q 018293 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV-PNLLATGSTDKMVKL 287 (358)
Q Consensus 209 ~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~~l~~~~~dg~i~i 287 (358)
..|.+++|+|+ +.++++++.|+.|++||.+... ..++..+.+|...|.+++|+|++ ..+|++|+.|++|++
T Consensus 154 ~~v~~v~~~p~-~~~l~s~s~D~~i~iW~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~i 225 (330)
T 2hes_X 154 QDVKHVIWHPS-EALLASSSYDDTVRIWKDYDDD-------WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV 225 (330)
T ss_dssp SCEEEEEECSS-SSEEEEEETTSCEEEEEEETTE-------EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEE
T ss_pred CceEEEEECCC-CCEEEEEcCCCeEEEEECCCCC-------eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEE
Confidence 89999999995 5699999999999999987642 14567888999999999999983 268999999999999
Q ss_pred EecCCCCc------eeeEecCC-CCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 288 WDLSNNQP------SCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 288 ~d~~~~~~------~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
||++.... .+...+.. |...|.+++|++++ +|++++.||.|++|+..+++
T Consensus 226 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 226 WKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTE
T ss_pred EEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCc
Confidence 99976421 23344444 88999999999776 48899999999999998763
No 53
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.6e-38 Score=265.80 Aligned_cols=257 Identities=20% Similarity=0.303 Sum_probs=212.4
Q ss_pred cccceeeecCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEE
Q 018293 48 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 127 (358)
Q Consensus 48 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 127 (358)
.+.++.| +|++++|++|+.||.|++||+.+.... ......+.+|...|++
T Consensus 13 ~v~~~~~-------~~~~~~l~~~~~dg~i~iw~~~~~~~~-----------------------~~~~~~~~~~~~~v~~ 62 (351)
T 3f3f_A 13 LVHDVVY-------DFYGRHVATCSSDQHIKVFKLDKDTSN-----------------------WELSDSWRAHDSSIVA 62 (351)
T ss_dssp CEEEEEE-------CSSSSEEEEEETTSEEEEEEECSSSCC-----------------------EEEEEEEECCSSCEEE
T ss_pred ceeEEEE-------cCCCCEEEEeeCCCeEEEEECCCCCCc-----------------------ceecceeccCCCcEEE
Confidence 3446655 899999999999999999999753321 2233455689999999
Q ss_pred EecCCC-CCcEEEEEEcCCeEEEEECCCC---------ceeeeecccccceeeEEEcCC--CCcEEEEEeCCCcEEEEEc
Q 018293 128 LAWNKE-FRNILASASADKQVKIWDVAAG---------KCNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDA 195 (358)
Q Consensus 128 ~~~~~~-~~~~l~s~~~dg~v~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~ 195 (358)
++|+|. ++.+|++|+.||.|++||++++ +.+..+..|...|.+++|+|+ + .++++++.||.|++||+
T Consensus 63 ~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 63 IDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDA 141 (351)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEEC
T ss_pred EEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecC
Confidence 999994 2679999999999999999887 557788889999999999999 7 89999999999999999
Q ss_pred ccCCCcccee-------------eecCCeeeEEEcCC--CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecC
Q 018293 196 RISTHSGFKW-------------AVAADVESLAWDPH--AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD 260 (358)
Q Consensus 196 ~~~~~~~~~~-------------~~~~~i~~~~~~~~--~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 260 (358)
++.+...... .+...+.+++|+|+ ++..+++++.++.+.+|+...... .....+.+|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~h~ 214 (351)
T 3f3f_A 142 LEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-------HVAAKLPGHK 214 (351)
T ss_dssp SSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE-------EEEEECCCCC
T ss_pred CChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce-------eeeeecCCCC
Confidence 8877554322 35677999999996 467999999999998887776521 3466778899
Q ss_pred CceeEEEecCCCC---cEEEEEeCCCcEEEEecCCCC-------------------------------------------
Q 018293 261 KAVCTISYNPLVP---NLLATGSTDKMVKLWDLSNNQ------------------------------------------- 294 (358)
Q Consensus 261 ~~i~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~------------------------------------------- 294 (358)
..|++++|+|+++ .+|++|+.||.|++||++...
T Consensus 215 ~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (351)
T 3f3f_A 215 SLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNL 294 (351)
T ss_dssp SCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSE
T ss_pred cceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccc
Confidence 9999999999863 699999999999999998742
Q ss_pred -ceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 295 -PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 295 -~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
...+..+.+|...|++++|+|++++ |++++.||.|++|++.+++.+..
T Consensus 295 ~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 295 QVELLSEHDDHNGEVWSVSWNLTGTI-LSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp EEEEEEEECTTSSCEEEEEECSSSCC-EEEEETTSCEEEEEECTTSCEEE
T ss_pred cccEEEEEecccccEEEEEEcCCCCE-EEEecCCCcEEEEecCcCcchhh
Confidence 1356667889999999999999994 89999999999999998876543
No 54
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2e-37 Score=261.83 Aligned_cols=286 Identities=18% Similarity=0.289 Sum_probs=216.3
Q ss_pred CcccCC-CcEEEEEEecCCCceEEEEEEeccCCCCCc-eEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEE
Q 018293 1 MTINPN-DAVIVCARNEDDVSHLEVYILEESDGGDPN-LYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78 (358)
Q Consensus 1 l~~~p~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 78 (358)
|+|+|+ +++|++|+.++ .|.+|+........ .....-......+.++.| +|++++|++|+.|+.|+
T Consensus 44 v~~sp~~~~~l~S~s~D~-----~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~-------s~dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 44 IATTPQFPDMILSASRDK-----TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI-------SSDGQFALSGSWDGTLR 111 (340)
T ss_dssp EEECTTCTTEEEEEETTS-----CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEE-------CTTSSEEEEEETTSEEE
T ss_pred EEEeCCCCCEEEEEcCCC-----eEEEEECCCCCcccceeeEEEeCCCCCEEEEEE-------CCCCCEEEEEcccccce
Confidence 478998 57888887665 55666654432211 111111112333445555 89999999999999999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce-
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC- 157 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~- 157 (358)
+|+........ ....+...+..+.++++ +.+|++|+.|+.+++||+.....
T Consensus 112 ~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~~~~~d~~~~~~~ 163 (340)
T 4aow_A 112 LWDLTTGTTTR---------------------------RFVGHTKDVLSVAFSSD-NRQIVSGSRDKTIKLWNTLGVCKY 163 (340)
T ss_dssp EEETTTTEEEE---------------------------EEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEE
T ss_pred EEeecccceee---------------------------eecCCCCceeEEEEeec-CccceeecCCCeEEEEEeCCCceE
Confidence 99987533222 23357778889999998 67899999999999999876543
Q ss_pred eeeecccccceeeEEEcCCCC-cEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEE
Q 018293 158 NLTLEHHTDKVQAVAWNHHSP-QILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGF 236 (358)
Q Consensus 158 ~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~ 236 (358)
.....+|...+..++|++++. .++++++.|+.|++||+++.+.......+...|.+++|+|+ +.++++|+.||.|++|
T Consensus 164 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~Dg~i~iw 242 (340)
T 4aow_A 164 TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD-GSLCASGGKDGQAMLW 242 (340)
T ss_dssp EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTCEEEEE
T ss_pred EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCC-CCEEEEEeCCCeEEEE
Confidence 445567899999999998753 46788999999999999998877767788999999999995 5699999999999999
Q ss_pred EcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCcee-------eEecCCCCceeE
Q 018293 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC-------IASRNPKAGAVF 309 (358)
Q Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-------~~~~~~~~~~v~ 309 (358)
|+++. ..+..+.. ...+.++.|+|++ .+++++.|+.|++||+++..... ......|...|+
T Consensus 243 d~~~~---------~~~~~~~~-~~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (340)
T 4aow_A 243 DLNEG---------KHLYTLDG-GDIINALCFSPNR--YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCT 310 (340)
T ss_dssp ETTTT---------EEEEEEEC-SSCEEEEEECSSS--SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEE
T ss_pred EeccC---------ceeeeecC-CceEEeeecCCCC--ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEE
Confidence 99986 55666654 4679999999976 45566779999999998765321 122346788999
Q ss_pred EEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 310 SVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 310 ~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
+++|+|++++ |++|+.||.|+|||+.+|++
T Consensus 311 ~l~~s~dg~~-l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 311 SLAWSADGQT-LFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp EEEECTTSSE-EEEEETTSCEEEEEEEC---
T ss_pred EEEECCCCCE-EEEEeCCCEEEEEeCCCcCC
Confidence 9999999995 89999999999999999863
No 55
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-38 Score=260.94 Aligned_cols=278 Identities=18% Similarity=0.217 Sum_probs=223.6
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++| |+++.|+++..++ .+.+|+.........+..| ...+.++.| +|++++|++|+.||.|++|
T Consensus 24 ~~~-~~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 24 VVA-VDDSKVASVSRDG-----TVRLWSKDDQWLGTVVYTG----QGFLNSVCY-------DSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp EEE-EETTEEEEEETTS-----EEEEEEESSSEEEEEEEEC----SSCEEEEEE-------ETTTTEEEEEETTSCEEEE
T ss_pred EEe-cCCCEEEEEEcCC-----cEEEEECCCCEEEEEeecC----CccEEEEEE-------CCCCCEEEEecCCCeEEEE
Confidence 356 8899999998777 7888887654222223222 334445555 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
++...... .....+.+|...|.+++|. +.++++++.||.|++|| .++....
T Consensus 87 ~~~~~~~~------------------------~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~ 137 (313)
T 3odt_A 87 PLFATSGE------------------------DPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYN 137 (313)
T ss_dssp ETTCCTTS------------------------CC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEE
T ss_pred EeeecCCC------------------------CcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEe
Confidence 99753322 2233456799999999994 45899999999999999 6778888
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceee-ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcc
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA-VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 239 (358)
+..|...+.++.|.|..+..+++++.||.|++||... ....... +...+.+++|+|++. +++++.||.|++||++
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~ 213 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK--VIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMH 213 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE--EEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETT
T ss_pred cccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc--eEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECC
Confidence 8899999999999983338999999999999999432 2222223 778899999999543 8999999999999999
Q ss_pred cCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCe
Q 018293 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 319 (358)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 319 (358)
+. ..+..+..|...|.+++|+|++ .|++++.||.|++||+++++ ....+..|...|.+++|+|+++
T Consensus 214 ~~---------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~- 279 (313)
T 3odt_A 214 TG---------DVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIWSKENGS--LKQVITLPAISIWSVDCMSNGD- 279 (313)
T ss_dssp TC---------CEEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEECTTTCC--EEEEEECSSSCEEEEEECTTSC-
T ss_pred ch---------hhhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEEECCCCc--eeEEEeccCceEEEEEEccCCC-
Confidence 87 7788889999999999999987 48899999999999999988 4566677888999999999998
Q ss_pred EEEEEccCCeEEEEEccCCCcccc
Q 018293 320 VLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 320 ~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
+++++.||.|++||+.+++.+..
T Consensus 280 -~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 280 -IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp -EEEEETTSCEEEEESCGGGCCC-
T ss_pred -EEEEeCCCcEEEEeCCCCceeeh
Confidence 44688999999999998776543
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-38 Score=269.01 Aligned_cols=247 Identities=23% Similarity=0.355 Sum_probs=205.1
Q ss_pred ccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCC-CcEEE
Q 018293 61 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILA 139 (358)
Q Consensus 61 ~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~ 139 (358)
|+|++++||+|+.||.|+|||+... .......+.+|...|++++|+++. +.+|+
T Consensus 19 ~s~~~~~l~~~~~dg~i~iw~~~~~-------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 73 (379)
T 3jrp_A 19 LDYYGKRLATCSSDKTIKIFEVEGE-------------------------THKLIDTLTGHEGPVWRVDWAHPKFGTILA 73 (379)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETT-------------------------EEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred EcCCCCEEEEEECCCcEEEEecCCC-------------------------cceeeeEecCCCCcEEEEEeCCCCCCCEEE
Confidence 3899999999999999999999621 123334566899999999998652 56999
Q ss_pred EEEcCCeEEEEECCCCc--eeeeecccccceeeEEEcCC--CCcEEEEEeCCCcEEEEEcccCCCcc--ceeeecCCeee
Q 018293 140 SASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHSG--FKWAVAADVES 213 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~i~~ 213 (358)
+|+.||.|++||+.+++ .+..+..|...|.+++|+|+ + .++++++.|+.|++||++...... ....+...+.+
T Consensus 74 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~ 152 (379)
T 3jrp_A 74 SCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS 152 (379)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEE
T ss_pred EeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEE
Confidence 99999999999999987 67788889999999999999 7 899999999999999999875433 34467889999
Q ss_pred EEEcCC------------CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC--CcEEEEE
Q 018293 214 LAWDPH------------AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV--PNLLATG 279 (358)
Q Consensus 214 ~~~~~~------------~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~l~~~ 279 (358)
++|+|. ++.++++++.||.|++||++..... ......+..|...|.+++|+|++ +.+|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 153 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-----YVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp EEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE-----EEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred EEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc-----eeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 999995 4679999999999999999876321 12445677899999999999993 3899999
Q ss_pred eCCCcEEEEecCCCCce---eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 280 STDKMVKLWDLSNNQPS---CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 280 ~~dg~i~i~d~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
+.||.|++||++++... .......|...|.+++|+|++++ |++++.||.|++|++..+.
T Consensus 228 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEESSSSEEEEEEEETT
T ss_pred eCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCE-EEEecCCCcEEEEeCCCCC
Confidence 99999999999986422 23333458889999999999995 8889999999999998543
No 57
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.9e-38 Score=276.85 Aligned_cols=285 Identities=15% Similarity=0.202 Sum_probs=206.9
Q ss_pred CcccCC-CcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccC-CCceEEecCCCCeEE
Q 018293 1 MTINPN-DAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMAVGSMEPAIE 78 (358)
Q Consensus 1 l~~~p~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~ 78 (358)
|+|+|. +++|++|..++ .|.+|+...+....+... ......+.++.| +| ++++|++|+.||+|+
T Consensus 125 l~~~P~~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~--~gH~~~V~~l~f-------~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 125 LAWHPTHPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKG--IGAGGSITGLKF-------NPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp EEECSSCTTCEEEEETTS-----CEEEECSSCCSCCEEECC--CSSSCCCCEEEE-------CSSCTTEEEEECSSSCEE
T ss_pred EEEeCCCCCEEEEEeCCC-----EEEEEECCCCCceeEEEc--cCCCCCEEEEEE-------eCCCCCEEEEEeCCCEEE
Confidence 578995 56888887776 778888765433332211 112334457666 66 689999999999999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCcee
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN 158 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 158 (358)
+||+.+... ........+...+.+++|+|+ +.+|++|+.||.|++||++ ++.+
T Consensus 191 iwd~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~i~~wd~~-~~~~ 243 (435)
T 4e54_B 191 LQDFKGNIL-------------------------RVFASSDTINIWFCSLDVSAS-SRMVVTGDNVGNVILLNMD-GKEL 243 (435)
T ss_dssp EEETTSCEE-------------------------EEEECCSSCSCCCCCEEEETT-TTEEEEECSSSBEEEEESS-SCBC
T ss_pred EeeccCCce-------------------------eEEeccCCCCccEEEEEECCC-CCEEEEEeCCCcEeeeccC-ccee
Confidence 999864211 111122235567889999999 6799999999999999986 4667
Q ss_pred eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc---ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEE
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG---FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 235 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i 235 (358)
..+.+|...|.+++|+|++..++++++.|+.|++||++..+... ....|...|.+++|+|+ +.+|++++.||.|++
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spd-g~~l~s~~~D~~i~i 322 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPD-GARLLTTDQKSEIRV 322 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTT-SSEEEEEESSSCEEE
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCC-CCeeEEEcCCCEEEE
Confidence 78889999999999999987789999999999999998766433 23467889999999995 558999999999999
Q ss_pred EEcccCCCCCCCCCCCccEEEeecCC------ceeEEEecCCCCcEEEEEe------------CCCcEEEEecCCCCcee
Q 018293 236 FDIRTAKSDPDSTSQQSSFTLHAHDK------AVCTISYNPLVPNLLATGS------------TDKMVKLWDLSNNQPSC 297 (358)
Q Consensus 236 ~d~~~~~~~~~~~~~~~~~~~~~~~~------~i~~i~~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~ 297 (358)
||+++. .....+..|.. .+....|+|++ .++++++ .++.|++||..+++...
T Consensus 323 wd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~ 392 (435)
T 4e54_B 323 YSASQW---------DCPLGLIPHPHRHFQHLTPIKAAWHPRY-NLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC 392 (435)
T ss_dssp EESSSS---------SSEEEECCCCCCCCSSSCCCBCEECSSS-SCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred EECCCC---------ccceEEecccccccccceeEEEEEcCCC-CEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence 999987 34444443321 12334566655 3444432 34679999999987422
Q ss_pred eEecCCCCceeEEE-EEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 298 IASRNPKAGAVFSV-AFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 298 ~~~~~~~~~~v~~~-~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
....+|...|.++ +|+|+|++ |++|+ |+.|+||++++++.
T Consensus 393 -~l~~~~~~~v~s~~~fspdg~~-lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 393 -QLYDPESSGISSLNEFNPMGDT-LASAM-GYHILIWSQQEART 433 (435)
T ss_dssp -EECCSSCCCCCCEEEECTTSSC-EEEEC-SSEEEECCCC----
T ss_pred -EEeCCCCCcEEEEEEECCCCCE-EEEEc-CCcEEEEECCcCee
Confidence 2345677888887 69999994 77765 88999999998764
No 58
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-38 Score=275.13 Aligned_cols=291 Identities=12% Similarity=0.155 Sum_probs=228.7
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.|+++..++ .+.+|+... .....+..| ...+.++.| +|++++|++++.||.|++|
T Consensus 114 ~~~s~~~~~l~~~~~dg-----~i~i~~~~~-~~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~d~~i~iw 176 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVENG-----ELRLWNKTG-ALLNVLNFH----RAPIVSVKW-------NKDGTHIISMDVENVTILW 176 (425)
T ss_dssp EEECTTSSEEEEEETTS-----CEEEEETTS-CEEEEECCC----CSCEEEEEE-------CTTSSEEEEEETTCCEEEE
T ss_pred EEEcCCCCEEEEEeCCC-----eEEEEeCCC-CeeeeccCC----CccEEEEEE-------CCCCCEEEEEecCCeEEEE
Confidence 46899999999998776 677787332 222222222 333445555 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
|+.+++........... ...........+...+.+++|+|+ + .+++++.||.|++||+.+++.+..
T Consensus 177 d~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~g~i~~~d~~~~~~~~~ 242 (425)
T 1r5m_A 177 NVISGTVMQHFELKETG------------GSSINAENHSGDGSLGVDVEWVDD-D-KFVIPGPKGAIFVYQITEKTPTGK 242 (425)
T ss_dssp ETTTTEEEEEECCC---------------------------CCCBSCCEEEET-T-EEEEECGGGCEEEEETTCSSCSEE
T ss_pred ECCCCcEEEEeeccccC------------ccceeeccccCCcceeeEEEEcCC-C-EEEEEcCCCeEEEEEcCCCceeee
Confidence 99765443321110000 000000011112223899999987 4 688999999999999999999999
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEccc
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~ 240 (358)
+..|...|.+++|+|++ .++++++.|+.|++||+++.+.......+...+.+++|+|++ .+++++.||.|++||+++
T Consensus 243 ~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~ 319 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ 319 (425)
T ss_dssp ECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTT
T ss_pred eccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCC
Confidence 99999999999999999 899999999999999999988777666788999999999965 899999999999999988
Q ss_pred CCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc------------------eeeEecC
Q 018293 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP------------------SCIASRN 302 (358)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------------------~~~~~~~ 302 (358)
. ..+..+..|...+.+++|+|++ .+|++++.||.|++||+++.+. ..+..+.
T Consensus 320 ~---------~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (425)
T 1r5m_A 320 N---------TLLALSIVDGVPIFAGRISQDG-QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ 389 (425)
T ss_dssp T---------EEEEEEECTTCCEEEEEECTTS-SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEEC
T ss_pred C---------cEeEecccCCccEEEEEEcCCC-CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc
Confidence 7 7778888899999999999998 8999999999999999987650 1456677
Q ss_pred CCCc--eeEEEEEcCCCCeEEEEEccCCeEEEEEcc
Q 018293 303 PKAG--AVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 303 ~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
.|.. .|.+++|+|+++ .|++++.||.|++|++.
T Consensus 390 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 390 SSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CTTCCCCEEEEEECTTSS-EEEEEESSSCCEEEECC
T ss_pred CcccCCceEEEEccCCCc-eEEEEecCceEEEEeec
Confidence 7766 999999999999 48899999999999985
No 59
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.4e-37 Score=286.88 Aligned_cols=282 Identities=18% Similarity=0.291 Sum_probs=212.2
Q ss_pred CcccCCC-cEEEEEEecCCCceEEEEEEeccCCCCC-ceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEE
Q 018293 1 MTINPND-AVIVCARNEDDVSHLEVYILEESDGGDP-NLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 78 (358)
Q Consensus 1 l~~~p~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 78 (358)
|+++|++ ++|++|+.++ .+.+|+....... ......-......+.++.| +|++++|++|+.||.|+
T Consensus 388 v~~~~~~~~~l~s~s~D~-----~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~-------s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 388 IATPIDNADIIVSASRDK-----SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL-------SSDGQFALSGSWDGELR 455 (694)
T ss_dssp EECCTTCCSEEEEEETTS-----EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEE-------CTTSSEEEEEETTSEEE
T ss_pred EEecCCCCCEEEEEeCCC-----cEEEEEccCCCcccccccceecCCCCcEEEEEE-------CCCCCEEEEEeCCCcEE
Confidence 3577765 6788887776 6777776543211 1111111112233345544 89999999999999999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCcee
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN 158 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 158 (358)
|||+.++... ..+.+|...|.+++|+|+ +.+|++|+.|++|++||.......
T Consensus 456 vwd~~~~~~~---------------------------~~~~~h~~~v~~~~~s~~-~~~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 456 LWDLAAGVST---------------------------RRFVGHTKDVLSVAFSLD-NRQIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp EEETTTTEEE---------------------------EEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEE
T ss_pred EEECCCCcce---------------------------eEEeCCCCCEEEEEEeCC-CCEEEEEeCCCEEEEEECCCCcce
Confidence 9999754322 245579999999999999 678999999999999998654332
Q ss_pred ee---ecccccceeeEEEcCCCC-cEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEE
Q 018293 159 LT---LEHHTDKVQAVAWNHHSP-QILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 234 (358)
Q Consensus 159 ~~---~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~ 234 (358)
.. ..+|...|.+++|+|++. ..+++++.|+.|++||++..+.......|...|.+++|+|+ +.++++++.||.|+
T Consensus 508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd-g~~l~sg~~Dg~i~ 586 (694)
T 3dm0_A 508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVL 586 (694)
T ss_dssp EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTSBCE
T ss_pred eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEE
Confidence 22 246888999999999862 57999999999999999988877767788999999999995 56999999999999
Q ss_pred EEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC------------
Q 018293 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN------------ 302 (358)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------ 302 (358)
+||++++ +.+..+. +...+.+++|+|++ .++++++ ++.|++||+++++........
T Consensus 587 iwd~~~~---------~~~~~~~-~~~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (694)
T 3dm0_A 587 LWDLAEG---------KKLYSLE-ANSVIHALCFSPNR-YWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSG 654 (694)
T ss_dssp EEETTTT---------EEEECCB-CSSCEEEEEECSSS-SEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------
T ss_pred EEECCCC---------ceEEEec-CCCcEEEEEEcCCC-cEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccc
Confidence 9999887 4444444 45679999999987 6776665 667999999987632222110
Q ss_pred -----CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEcc
Q 018293 303 -----PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 303 -----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
.+...+++++|+|+|+ .|++|+.||.|++|++.
T Consensus 655 ~~~~~~~~~~~~~l~~spdg~-~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 655 PAATKRKVIYCTSLNWSADGS-TLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ------CCCCEEEEEECTTSS-EEEEEETTSEEEEEEC-
T ss_pred cccCCceeEEeeeEEEcCCCC-EEEEEcCCCeEEEEecc
Confidence 1112378999999999 48999999999999985
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.8e-38 Score=272.45 Aligned_cols=280 Identities=13% Similarity=0.175 Sum_probs=218.6
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~ 81 (358)
.++|+++.|+++..++ .+.+|+...+.....+.. ....+.++.| +|++++|++|+.||.|++||
T Consensus 104 ~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~----h~~~v~~~~~-------~~~~~~l~s~s~d~~i~iwd 167 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEG-----DIKVLDSNFNLQREIDQA----HVSEITKLKF-------FPSGEALISSSQDMQLKIWS 167 (420)
T ss_dssp EECSSSCEEEEEETTS-----CEEEECTTSCEEEEETTS----SSSCEEEEEE-------CTTSSEEEEEETTSEEEEEE
T ss_pred EEecCCCEEEEEECCC-----CEEEEeCCCcceeeeccc----ccCccEEEEE-------CCCCCEEEEEeCCCeEEEEe
Confidence 4689999999998776 778888765421111112 2334446655 89999999999999999999
Q ss_pred cccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeee
Q 018293 82 LDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL 161 (358)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 161 (358)
+.+++... .+.+|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+
T Consensus 168 ~~~~~~~~---------------------------~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 168 VKDGSNPR---------------------------TLIGHRATVTDIAIIDR-GRNVLSASLDGTIRLWECGTGTTIHTF 219 (420)
T ss_dssp TTTCCCCE---------------------------EEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCcCce---------------------------EEcCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEeECCCCceeEEe
Confidence 97644332 34579999999999999 679999999999999999999988888
Q ss_pred cc---cc---------------------cceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-eecCCeeeEEE
Q 018293 162 EH---HT---------------------DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAW 216 (358)
Q Consensus 162 ~~---~~---------------------~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~ 216 (358)
.. +. ..+.+++|+|++ .++++++.||.|++||+++.+...... .+...+.+++|
T Consensus 220 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 298 (420)
T 3vl1_A 220 NRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTV 298 (420)
T ss_dssp CBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEE
T ss_pred ecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEE
Confidence 64 22 445555667888 899999999999999999877654333 36788999999
Q ss_pred cCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee-cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc
Q 018293 217 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295 (358)
Q Consensus 217 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 295 (358)
+|++..++++|+.||.|++||+++.. .++..+.. |...+.++.+. ++ .+|++++.|+.|++||+.....
T Consensus 299 ~~~~~~~l~~g~~dg~i~vwd~~~~~--------~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 299 DGNNANYIYAGYENGMLAQWDLRSPE--------CPVGEFLINEGTPINNVYFA-AG-ALFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTCTT--------SCSEEEEESTTSCEEEEEEE-TT-EEEEEETTTEEEEEEEECCTTC
T ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCc--------CchhhhhccCCCCceEEEeC-CC-CEEEEecCCccEEEEeccCCCC
Confidence 99776699999999999999999862 44666666 67778888655 55 7999999999999999987321
Q ss_pred -------eeeEecCCCCceeEEEEEcCCCC---eEEEEEccCCeEEEEEccC
Q 018293 296 -------SCIASRNPKAGAVFSVAFSEDSP---FVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 296 -------~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~~~dg~i~vw~~~~ 337 (358)
........|...|.+++|+|+++ .+++ .+.+|.+.+|++.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a-~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 369 ERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLE-VGKNNFCALYNLSN 419 (420)
T ss_dssp CSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEE-EETTTEEEEEESCC
T ss_pred CccceeccCccEEccCCcceEEEEEccCCCCcceEEE-EcCCceEEEEeccC
Confidence 11223456788999999999998 6455 56689999999865
No 61
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.8e-36 Score=250.97 Aligned_cols=278 Identities=21% Similarity=0.369 Sum_probs=217.8
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
|++||++ +|++| .++ .|++|+...++....+..+ .....+.++.| +|++++|++|+.||.|++|
T Consensus 31 l~WS~~~-~lAvg-~D~-----tV~iWd~~tg~~~~~~~~~--~~~~~V~~v~~-------~~~~~~l~sgs~Dg~v~iw 94 (318)
T 4ggc_A 31 VDWSSGN-VLAVA-LDN-----SVYLWSASSGDILQLLQME--QPGEYISSVAW-------IKEGNYLAVGTSSAEVQLW 94 (318)
T ss_dssp EEECTTS-EEEEE-ETT-----EEEEEETTTCCEEEEEECC--STTCCEEEEEE-------CTTSSEEEEEETTSEEEEE
T ss_pred EEECCCC-EEEEE-eCC-----EEEEEECCCCCEEEEEEec--CCCCeEEEEEE-------CCCCCEEEEEECCCcEEEe
Confidence 3567765 77766 565 7889998776333332211 12223445555 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC-ceee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG-KCNL 159 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~ 159 (358)
|+.+++.. ..+.+|...+.++.+.+ .++++++.++.+++|+.... ..+.
T Consensus 95 ~~~~~~~~---------------------------~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~ 144 (318)
T 4ggc_A 95 DVQQQKRL---------------------------RNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVA 144 (318)
T ss_dssp ETTTTEEE---------------------------EEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEE
T ss_pred ecCCceeE---------------------------EEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEE
Confidence 99765433 24457888888887764 48999999999999998876 4566
Q ss_pred eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc----ceeeecCCeeeEEEcCCCCCeEE--EEecCCeE
Q 018293 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG----FKWAVAADVESLAWDPHAEHSFV--VSLEDGTI 233 (358)
Q Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~--~~~~dg~i 233 (358)
.+.+|...+..+.+.+++ .++++++.|+.|++||+++++... ....+...+.++.++|++...+. +++.++.|
T Consensus 145 ~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i 223 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 223 (318)
T ss_dssp EEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEE
T ss_pred EEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEE
Confidence 778899999999999999 899999999999999998776432 23346678999999998777664 45678999
Q ss_pred EEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEE--eCCCcEEEEecCCCCceeeEecCCCCceeEEE
Q 018293 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIASRNPKAGAVFSV 311 (358)
Q Consensus 234 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~ 311 (358)
++||.+.. . ......+...+..+.|+|++ ..++++ +.|+.|++||+++++ .+..+.+|.+.|+++
T Consensus 224 ~lwd~~~~---------~-~~~~~~~~~~v~~~~~~~~~-~~~~~~sg~~d~~i~iwd~~~~~--~~~~l~gH~~~V~~l 290 (318)
T 4ggc_A 224 RIWNVCSG---------A-CLSAVDAHSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMA--KVAELKGHTSRVLSL 290 (318)
T ss_dssp EEEETTTC---------C-EEEEEECSSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCC--EEEEECCCSSCEEEE
T ss_pred EEEecccc---------c-ccccccceeeeeeeeecccc-cceEEEEEcCCCEEEEEECCCCc--EEEEEcCCCCCEEEE
Confidence 99999875 3 33445677889999999988 555544 379999999999988 577788999999999
Q ss_pred EEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 312 AFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 312 ~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
+|+|++++ |++|+.||+|+|||+.+..
T Consensus 291 ~~spdg~~-l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 291 TMSPDGAT-VASAAADETLRLWRCFELD 317 (318)
T ss_dssp EECTTSSC-EEEEETTTEEEEECCSCCC
T ss_pred EEcCCCCE-EEEEecCCeEEEEECCCCC
Confidence 99999995 9999999999999997643
No 62
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=260.78 Aligned_cols=273 Identities=18% Similarity=0.212 Sum_probs=212.7
Q ss_pred CcccceeeecCCccccC-CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccE
Q 018293 47 AFPLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV 125 (358)
Q Consensus 47 ~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 125 (358)
..+.++.| +| ++++|++|+.||.|++||+.+........... ..........+|...|
T Consensus 44 ~~v~~~~~-------s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 44 GGINTLDI-------EPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA--------------VCSIGRDHPDVHRYSV 102 (408)
T ss_dssp SCEEEEEE-------CTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE--------------EEEECTTCTTCCSSCE
T ss_pred CcEEEEEE-------ecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc--------------cccccccccccCCCcE
Confidence 34446655 88 99999999999999999998766544322110 0011112234699999
Q ss_pred EEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCC--cEEEEEeCCCcEEEEEcccCCCccc
Q 018293 126 LGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSP--QILLSGSFDRSVVMKDARISTHSGF 203 (358)
Q Consensus 126 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~ 203 (358)
.+++|+|+++.+|++++.||.|++||+.+++....+. +...+.++.|++.+. .++++++.|+.|++||+++++....
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 181 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI 181 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee
Confidence 9999999657899999999999999999998888777 778899999998652 4899999999999999999888776
Q ss_pred eeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCC-------CCCCCccEEEeecCCceeEEEecCCCCcEE
Q 018293 204 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD-------STSQQSSFTLHAHDKAVCTISYNPLVPNLL 276 (358)
Q Consensus 204 ~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l 276 (358)
...+...|.+++|+|++..++++++.||.|++||++....... ............|...|.+++|+|++ .+|
T Consensus 182 ~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l 260 (408)
T 4a11_B 182 LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG-LHL 260 (408)
T ss_dssp ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS-SEE
T ss_pred ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC-CEE
Confidence 7778999999999998776799999999999999987631100 00001112225788999999999998 899
Q ss_pred EEEeCCCcEEEEecCCCCc---------------------------------------------eeeEecCCCCceeEEE
Q 018293 277 ATGSTDKMVKLWDLSNNQP---------------------------------------------SCIASRNPKAGAVFSV 311 (358)
Q Consensus 277 ~~~~~dg~i~i~d~~~~~~---------------------------------------------~~~~~~~~~~~~v~~~ 311 (358)
++++.||.|++||+++++. ..+..+.+|...|.++
T Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~ 340 (408)
T 4a11_B 261 LTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCC 340 (408)
T ss_dssp EEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEE
Confidence 9999999999999987542 1344557789999999
Q ss_pred EEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 312 AFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 312 ~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
+|+|+++ +|++++.||.|++||+.+++.+..
T Consensus 341 ~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 341 VFQSNFQ-ELYSGSRDCNILAWVPSLYEPVPD 371 (408)
T ss_dssp EEETTTT-EEEEEETTSCEEEEEECC------
T ss_pred EEcCCCC-EEEEECCCCeEEEEeCCCCCccCC
Confidence 9999999 589999999999999999887654
No 63
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-38 Score=271.31 Aligned_cols=245 Identities=14% Similarity=0.163 Sum_probs=189.9
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+|+|++++||+|+.||.|+|||+.+.. ......+.+|...|.+++|+|+ +++|+
T Consensus 18 ~~s~~g~~l~~~~~d~~i~iw~~~~~~-------------------------~~~~~~~~~h~~~v~~~~~s~~-~~~l~ 71 (377)
T 3dwl_C 18 AFNSQRTEFVTTTATNQVELYEQDGNG-------------------------WKHARTFSDHDKIVTCVDWAPK-SNRIV 71 (377)
T ss_dssp EECSSSSEEECCCSSSCBCEEEEETTE-------------------------EEECCCBCCCSSCEEEEEECTT-TCCEE
T ss_pred EECCCCCEEEEecCCCEEEEEEccCCc-------------------------eEEEEEEecCCceEEEEEEeCC-CCEEE
Confidence 348999999999999999999997531 1233456689999999999999 67999
Q ss_pred EEEcCCeEEEEECCCCc---eeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC---ccceee-ecCCee
Q 018293 140 SASADKQVKIWDVAAGK---CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH---SGFKWA-VAADVE 212 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~-~~~~i~ 212 (358)
+++.|+.|++||+.+++ ....+..|...|.+++|+|++ .+|++++.|+.|++||++..+. ...... |...|.
T Consensus 72 s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 150 (377)
T 3dwl_C 72 TCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL 150 (377)
T ss_dssp EEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEE
T ss_pred EEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeE
Confidence 99999999999999877 667778899999999999998 8899999999999999998763 333444 788999
Q ss_pred eEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCC---------CCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC
Q 018293 213 SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS---------TSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 283 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg 283 (358)
+++|+|+ +.++++++.||.|++||++........ ........+ .|...|.+++|+|++ .+|++++.||
T Consensus 151 ~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~-~~l~~~~~d~ 227 (377)
T 3dwl_C 151 SLDWHPN-NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG-NALAYAGHDS 227 (377)
T ss_dssp EEEECTT-SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS-SCEEEEETTT
T ss_pred EEEEcCC-CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC-CEEEEEeCCC
Confidence 9999995 569999999999999999744321100 001233444 889999999999998 8999999999
Q ss_pred cEEEEecCCCCce--eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEcc
Q 018293 284 MVKLWDLSNNQPS--CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 284 ~i~i~d~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
.|++||+++++.. .+..+..|...|.+++|+|+++ +|++|+.++.+ +|+..
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCC
T ss_pred cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeC
Confidence 9999999988741 1556678899999999999998 58888766665 66665
No 64
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2e-37 Score=267.86 Aligned_cols=289 Identities=18% Similarity=0.294 Sum_probs=218.4
Q ss_pred cccCCCcEEEEE-EecCCCceEEEEEEeccCCC----CCceEeeceeecCCcccceeeecCCccccC-CCceEEecCCCC
Q 018293 2 TINPNDAVIVCA-RNEDDVSHLEVYILEESDGG----DPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMAVGSMEP 75 (358)
Q Consensus 2 ~~~p~~~~l~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg 75 (358)
+++|+...+++. ..++ .+.+|+..... ....+..| ...+.++.| +| ++++|++|+.||
T Consensus 41 ~~~~~~~~~~~~~~~~g-----~i~v~~~~~~~~~~~~~~~~~~h----~~~V~~~~~-------~p~~~~~l~s~s~dg 104 (402)
T 2aq5_A 41 AVNPKFMALICEASGGG-----AFLVLPLGKTGRVDKNVPLVCGH----TAPVLDIAW-------CPHNDNVIASGSEDC 104 (402)
T ss_dssp EECSSEEEEEBCCSSSC-----CEEEEETTCCEECCTTCCCBCCC----SSCEEEEEE-------CTTCTTEEEEEETTS
T ss_pred EECCCeEEEEEEEcCCC-----EEEEEECccCCCCCCCCceEecC----CCCEEEEEe-------CCCCCCEEEEEeCCC
Confidence 456766666654 3344 66677754321 11122222 233446665 78 899999999999
Q ss_pred eEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC
Q 018293 76 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 155 (358)
Q Consensus 76 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 155 (358)
.|+|||+.++..... .......+.+|...|.+++|+|++..+|++++.||.|++||++++
T Consensus 105 ~v~vw~~~~~~~~~~--------------------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 164 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLP--------------------LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG 164 (402)
T ss_dssp EEEEEECCTTCCSSC--------------------BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT
T ss_pred eEEEEEccCCCCccc--------------------cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC
Confidence 999999986543221 113344566899999999999996579999999999999999999
Q ss_pred ceeeee--cccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce-eeecCC-eeeEEEcCCCCCeEEEE---e
Q 018293 156 KCNLTL--EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-WAVAAD-VESLAWDPHAEHSFVVS---L 228 (358)
Q Consensus 156 ~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~---~ 228 (358)
+.+..+ ..|...|.+++|+|++ .+|++++.||.|++||+++++..... ..+... +.++.|+|+ +.++++| +
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~ 242 (402)
T 2aq5_A 165 AAVLTLGPDVHPDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRM 242 (402)
T ss_dssp EEEEEECTTTCCSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST-TEEEEEEECTT
T ss_pred CccEEEecCCCCCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC-CcEEEEeccCC
Confidence 999999 7899999999999998 88999999999999999988766544 355554 899999995 5588888 7
Q ss_pred cCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCCCcEE-EEEeCCCcEEEEecCCCCc-eeeEecCCCC
Q 018293 229 EDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLL-ATGSTDKMVKLWDLSNNQP-SCIASRNPKA 305 (358)
Q Consensus 229 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~ 305 (358)
.|+.|++||+++.. .+.... ..|...+.+++|+|++ .+| ++|+.||.|++||+.++++ ........|.
T Consensus 243 ~d~~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~ 313 (402)
T 2aq5_A 243 SERQVALWDTKHLE--------EPLSLQELDTSSGVLLPFFDPDT-NIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSK 313 (402)
T ss_dssp CCEEEEEEETTBCS--------SCSEEEECCCCSSCEEEEEETTT-TEEEEEETTCSCEEEEEECSSTTCEEEEEEECCS
T ss_pred CCceEEEEcCcccc--------CCceEEeccCCCceeEEEEcCCC-CEEEEEEcCCCeEEEEEecCCCcceEeecccccC
Confidence 89999999999863 223232 3567789999999998 555 4666899999999998874 2222222367
Q ss_pred ceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 306 GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 306 ~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
.+|.+++|+|++.+ ++ +.++.+++|++.+++.
T Consensus 314 ~~v~~~~~sp~~~~-~~--s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 314 ESQRGMGYMPKRGL-EV--NKCEIARFYKLHERKC 345 (402)
T ss_dssp SCCSEEEECCGGGS-CG--GGTEEEEEEEEETTEE
T ss_pred CcccceEEeccccc-ce--ecceeEEEEEcCCCcE
Confidence 89999999999985 54 4567999999988653
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.4e-37 Score=287.01 Aligned_cols=283 Identities=19% Similarity=0.238 Sum_probs=234.0
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.|+++..++ .+.+|+...+.....+..| ...+.++.| +|++++|++|+.||.|++|
T Consensus 19 i~~sp~~~~la~~~~~g-----~v~iwd~~~~~~~~~~~~~----~~~v~~~~~-------s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSG-----RVEIWNYETQVEVRSIQVT----ETPVRAGKF-------IARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECC----SSCEEEEEE-------EGGGTEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEEeCCC-----EEEEEECCCCceEEEEecC----CCcEEEEEE-------eCCCCEEEEEeCCCeEEEE
Confidence 47999999999998776 7888887664222222222 334456666 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC-ceee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG-KCNL 159 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~ 159 (358)
|+.+++.. ..+.+|...|.+++|+|+ +.+|++++.||.|++||+.++ ....
T Consensus 83 ~~~~~~~~---------------------------~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 83 NYNTGEKV---------------------------VDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQ 134 (814)
T ss_dssp ETTTCCEE---------------------------EEEECCSSCEEEEEECSS-SSEEEEEETTSEEEEEEGGGTSEEEE
T ss_pred ECCCCcEE---------------------------EEEecCCCCEEEEEEeCC-CCEEEEEcCCCEEEEEECCCCceEEE
Confidence 99764432 234579999999999999 669999999999999999887 6777
Q ss_pred eecccccceeeEEEcC-CCCcEEEEEeCCCcEEEEEcccCCCccceeeec-CCeeeEEEcCC-CCCeEEEEecCCeEEEE
Q 018293 160 TLEHHTDKVQAVAWNH-HSPQILLSGSFDRSVVMKDARISTHSGFKWAVA-ADVESLAWDPH-AEHSFVVSLEDGTIKGF 236 (358)
Q Consensus 160 ~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~-~~~~~~~~~~dg~i~i~ 236 (358)
.+.+|...|.+++|+| ++ ..+++++.||.|++||+...........+. ..+.+++|+|. ++.++++++.||.|++|
T Consensus 135 ~~~~~~~~v~~~~~~p~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~ 213 (814)
T 3mkq_A 135 TFEGHEHFVMCVAFNPKDP-STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (814)
T ss_dssp EEECCSSCEEEEEEETTEE-EEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEE
T ss_pred EEcCCCCcEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 8888999999999999 55 899999999999999998877665444443 88999999982 34589999999999999
Q ss_pred EcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCC
Q 018293 237 DIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 316 (358)
Q Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 316 (358)
|++++ .....+..|...|.+++|+|++ .+|++++.||.|++||+.+++ ....+..|...+.+++|+|+
T Consensus 214 d~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~ 281 (814)
T 3mkq_A 214 DYQTK---------SCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK--VEKTLNVGLERSWCIATHPT 281 (814)
T ss_dssp ETTTT---------EEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCS--EEEEECCSSSSEEEEEECTT
T ss_pred ECCCC---------cEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc--EEEEeecCCCcEEEEEEccC
Confidence 99886 6778888999999999999998 899999999999999999887 56677788889999999999
Q ss_pred CCeEEEEEccCCeEEEEEccCCCc
Q 018293 317 SPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 317 ~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
+..++++++.++.+.+|++..+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 282 GRKNYIASGFDNGFTVLSLGNDEP 305 (814)
T ss_dssp CGGGEEEEEETTEEEEEECSCCSC
T ss_pred CCceEEEEEeCCCEEEEEcCCCCc
Confidence 975445556678899999876543
No 66
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.9e-37 Score=270.61 Aligned_cols=257 Identities=16% Similarity=0.187 Sum_probs=196.5
Q ss_pred cccceeeecCCccccC-CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEE
Q 018293 48 FPLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL 126 (358)
Q Consensus 48 ~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 126 (358)
.+.|++| +| ++++||+|+.||.|+|||+.+.+.. ....+.+|.+.|+
T Consensus 121 ~V~~l~~-------~P~~~~~lasGs~dg~i~lWd~~~~~~~-------------------------~~~~~~gH~~~V~ 168 (435)
T 4e54_B 121 RATSLAW-------HPTHPSTVAVGSKGGDIMLWNFGIKDKP-------------------------TFIKGIGAGGSIT 168 (435)
T ss_dssp CEEEEEE-------CSSCTTCEEEEETTSCEEEECSSCCSCC-------------------------EEECCCSSSCCCC
T ss_pred CEEEEEE-------eCCCCCEEEEEeCCCEEEEEECCCCCce-------------------------eEEEccCCCCCEE
Confidence 3456666 77 5679999999999999999754322 1224557999999
Q ss_pred EEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeec--ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce
Q 018293 127 GLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 204 (358)
Q Consensus 127 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 204 (358)
+|+|+|.++.+|++|+.||+|++||++++....... .+...+.+++|+|++ .+|++|+.||.|++||++... ....
T Consensus 169 ~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~-~~~~ 246 (435)
T 4e54_B 169 GLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKE-LWNL 246 (435)
T ss_dssp EEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCB-CCCS
T ss_pred EEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcce-eEEE
Confidence 999999657899999999999999998765433332 334567899999999 899999999999999997543 4446
Q ss_pred eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCc
Q 018293 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 284 (358)
Q Consensus 205 ~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 284 (358)
..|...|.+++|+|++..++++++.|+.|++||+++.... .......+|...|++++|+|++ .+|++++.||.
T Consensus 247 ~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~------~~~~~~~~h~~~v~~~~~spdg-~~l~s~~~D~~ 319 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK------ASFLYSLPHRHPVNAACFSPDG-ARLLTTDQKSE 319 (435)
T ss_dssp BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS------SCCSBCCBCSSCEEECCBCTTS-SEEEEEESSSC
T ss_pred ecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc------ceEEEeeeccccccceeECCCC-CeeEEEcCCCE
Confidence 6788999999999988889999999999999999876431 2233446789999999999998 89999999999
Q ss_pred EEEEecCCCCceeeEecCCCCc------eeEEEEEcCCCCeEEEEE------------ccCCeEEEEEccCCCccccccc
Q 018293 285 VKLWDLSNNQPSCIASRNPKAG------AVFSVAFSEDSPFVLAIG------------GSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 285 i~i~d~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~------------~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
|++||+++++. ...+..|.. .+....|+|++.. ++++ ..++.|++||..+++.+.....
T Consensus 320 i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~ 396 (435)
T 4e54_B 320 IRVYSASQWDC--PLGLIPHPHRHFQHLTPIKAAWHPRYNL-IVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD 396 (435)
T ss_dssp EEEEESSSSSS--EEEECCCCCCCCSSSCCCBCEECSSSSC-EEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC
T ss_pred EEEEECCCCcc--ceEEecccccccccceeEEEEEcCCCCE-EEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC
Confidence 99999998774 223322221 2234456666553 3333 2446899999999988877654
Q ss_pred cC
Q 018293 347 KY 348 (358)
Q Consensus 347 ~~ 348 (358)
.+
T Consensus 397 ~~ 398 (435)
T 4e54_B 397 PE 398 (435)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 67
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=264.61 Aligned_cols=308 Identities=13% Similarity=0.213 Sum_probs=211.7
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCC-----------CceEeecee--------ecCCcccceeeecCCccc
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGD-----------PNLYVHHHI--------IIPAFPLCMAWLDCPLKD 61 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 61 (358)
++|+|++++|++|..++ .+.+|+...+.. ...+..|.. .....+.++.|
T Consensus 34 v~~s~~g~~la~g~~dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~------- 101 (447)
T 3dw8_B 34 VEFNHSGELLATGDKGG-----RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW------- 101 (447)
T ss_dssp EEECSSSSEEEEEETTS-----EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE-------
T ss_pred EEECCCCCEEEEEcCCC-----eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE-------
Confidence 47999999999998776 777777665421 111112210 00133456666
Q ss_pred cCCC--ceEEecCCCCeEEEEEcccccCcCceeecCCcccccc---cccccC----------CceeccccccCCCcccEE
Q 018293 62 REKG--NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKK---KKKSKK----------GKKSSIKYKKGSHTDSVL 126 (358)
Q Consensus 62 s~~~--~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----------~~~~~~~~~~~~h~~~v~ 126 (358)
+|++ .+|++++.||.|++||+.+.................. ...... ...........+|...|.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 7887 7999999999999999986443211000000000000 000000 000011122468999999
Q ss_pred EEecCCCCCcEEEEEEcCCeEEEEECCC-Cceee-------eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC
Q 018293 127 GLAWNKEFRNILASASADKQVKIWDVAA-GKCNL-------TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 198 (358)
Q Consensus 127 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 198 (358)
+++|+|+ +.+|++| .|+.|++||+++ ++... .+.+|...|.+++|+|+++.+|++++.||.|++||++++
T Consensus 182 ~~~~~~~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 182 SISINSD-YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp EEEECTT-SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred EEEEcCC-CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 9999999 6789998 799999999984 44444 356899999999999998689999999999999999988
Q ss_pred CC----ccceeeecC------------CeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCc
Q 018293 199 TH----SGFKWAVAA------------DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKA 262 (358)
Q Consensus 199 ~~----~~~~~~~~~------------~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (358)
+. ......+.. .|.+++|+|+ +.++++++. +.|++||++.. ..++..+..|...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~~--------~~~~~~~~~~~~~ 329 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS-GRYMMTRDY-LSVKVWDLNME--------NRPVETYQVHEYL 329 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTT-SSEEEEEES-SEEEEEETTCC--------SSCSCCEESCGGG
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCC-CCEEEEeeC-CeEEEEeCCCC--------ccccceeeccccc
Confidence 75 333344443 8999999995 558888888 99999999872 1556666666532
Q ss_pred ---------------eeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEec--------------------------
Q 018293 263 ---------------VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-------------------------- 301 (358)
Q Consensus 263 ---------------i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------------------- 301 (358)
+..++|+|++ .+|++|+.||.|++||+.+++...+...
T Consensus 330 ~~~l~~~~~~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (447)
T 3dw8_B 330 RSKLCSLYENDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEI 408 (447)
T ss_dssp TTTHHHHHHTSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCE
T ss_pred cccccccccccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccc
Confidence 2349999998 8999999999999999998874322111
Q ss_pred ----CCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEc
Q 018293 302 ----NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335 (358)
Q Consensus 302 ----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~ 335 (358)
..+...|..++|+|++. +||+++.++ +++|.-
T Consensus 409 ~~~~~~~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 409 SVDSLDFNKKILHTAWHPKEN-IIAVATTNN-LYIFQD 444 (447)
T ss_dssp EGGGCCTTSCCCEEEECSSSS-EEEEECSSC-EEEEEC
T ss_pred cccccccCCceeEEEECCCCC-EEEEEecce-eeeecc
Confidence 12345688999999999 588887765 778864
No 68
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-36 Score=280.56 Aligned_cols=244 Identities=22% Similarity=0.331 Sum_probs=203.7
Q ss_pred cCC-CceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEE
Q 018293 62 REK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 140 (358)
Q Consensus 62 s~~-~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 140 (358)
+|+ +++|++|+.||+|++|++.+..... ......+.+|...|.+++|+|+ +.+|++
T Consensus 391 ~~~~~~~l~s~s~D~~i~~W~~~~~~~~~----------------------~~~~~~~~~h~~~v~~v~~s~~-g~~l~s 447 (694)
T 3dm0_A 391 PIDNADIIVSASRDKSIILWKLTKDDKAY----------------------GVAQRRLTGHSHFVEDVVLSSD-GQFALS 447 (694)
T ss_dssp CTTCCSEEEEEETTSEEEEEECCCSTTCS----------------------CEEEEEEECCSSCEEEEEECTT-SSEEEE
T ss_pred cCCCCCEEEEEeCCCcEEEEEccCCCccc----------------------ccccceecCCCCcEEEEEECCC-CCEEEE
Confidence 665 5799999999999999997533211 1122356689999999999999 679999
Q ss_pred EEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc---eeeecCCeeeEEEc
Q 018293 141 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---KWAVAADVESLAWD 217 (358)
Q Consensus 141 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~i~~~~~~ 217 (358)
|+.||+|++||+.+++.+..+.+|...|.+++|+|++ .+|++++.|++|++||......... ...|...|.+++|+
T Consensus 448 gs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 448 GSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred EeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 9999999999999999999999999999999999999 8899999999999999865432211 12467789999999
Q ss_pred CCC-CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce
Q 018293 218 PHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296 (358)
Q Consensus 218 ~~~-~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 296 (358)
|++ ...+++++.|+.|++||+++. .....+.+|...|++++|+|++ .+|++|+.||.|++||+++++
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~~~---------~~~~~~~~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~~~-- 594 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLSNC---------KLRSTLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEGK-- 594 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTTTE--
T ss_pred CCCCcceEEEEeCCCeEEEEECCCC---------cEEEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc--
Confidence 965 358999999999999999876 6778889999999999999998 899999999999999999887
Q ss_pred eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 297 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
.+..+. +...|.+++|+|++. ++++ +.++.|++||+.+++.+...
T Consensus 595 ~~~~~~-~~~~v~~~~~sp~~~-~l~~-~~~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 595 KLYSLE-ANSVIHALCFSPNRY-WLCA-ATEHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp EEECCB-CSSCEEEEEECSSSS-EEEE-EETTEEEEEETTTTEEEEEE
T ss_pred eEEEec-CCCcEEEEEEcCCCc-EEEE-EcCCCEEEEECCCCCChhhh
Confidence 344443 456799999999998 4654 45677999999998776544
No 69
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.3e-36 Score=262.73 Aligned_cols=248 Identities=21% Similarity=0.285 Sum_probs=204.2
Q ss_pred ccccCCCceE-EecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcE
Q 018293 59 LKDREKGNFM-AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 137 (358)
Q Consensus 59 ~~~s~~~~~l-~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 137 (358)
++++|+...+ ++|+.||.|+||++...... ......+.+|...|++++|+|.++.+
T Consensus 40 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~-----------------------~~~~~~~~~h~~~V~~~~~~p~~~~~ 96 (402)
T 2aq5_A 40 CAVNPKFMALICEASGGGAFLVLPLGKTGRV-----------------------DKNVPLVCGHTAPVLDIAWCPHNDNV 96 (402)
T ss_dssp EEECSSEEEEEBCCSSSCCEEEEETTCCEEC-----------------------CTTCCCBCCCSSCEEEEEECTTCTTE
T ss_pred EEECCCeEEEEEEEcCCCEEEEEECccCCCC-----------------------CCCCceEecCCCCEEEEEeCCCCCCE
Confidence 3457776544 45789999999999642211 12233466899999999999933789
Q ss_pred EEEEEcCCeEEEEECCCC-------ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce--eeec
Q 018293 138 LASASADKQVKIWDVAAG-------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--WAVA 208 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~ 208 (358)
|++|+.||.|++||+.++ +++..+.+|...|.+++|+|++..++++++.||.|++||+++++..... ..+.
T Consensus 97 l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 176 (402)
T 2aq5_A 97 IASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHP 176 (402)
T ss_dssp EEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCC
T ss_pred EEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCC
Confidence 999999999999999987 5678888999999999999998679999999999999999988776655 5688
Q ss_pred CCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCc-eeEEEecCCCCcEEEEE---eCCC
Q 018293 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKA-VCTISYNPLVPNLLATG---STDK 283 (358)
Q Consensus 209 ~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~-i~~i~~~~~~~~~l~~~---~~dg 283 (358)
..|.+++|+|+ +.++++++.||.|++||++++ ..+..+ ..|... +.++.|+|++ .+|++| +.|+
T Consensus 177 ~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 177 DTIYSVDWSRD-GALICTSCRDKRVRVIEPRKG---------TVVAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSER 245 (402)
T ss_dssp SCEEEEEECTT-SSCEEEEETTSEEEEEETTTT---------EEEEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCE
T ss_pred CceEEEEECCC-CCEEEEEecCCcEEEEeCCCC---------ceeeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCc
Confidence 89999999995 568999999999999999987 666666 677765 8999999998 899998 7899
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
.|++||+++.+.........|...+.+++|+|++++++++|+.||.|++||+.+++.
T Consensus 246 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred eEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 999999998764222333356678999999999997666777899999999998875
No 70
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-37 Score=268.30 Aligned_cols=289 Identities=14% Similarity=0.142 Sum_probs=214.5
Q ss_pred CcccC-CCcEEEEEEecCCCceEEEEEEeccC---CCC--CceEeeceeecCCcccceeeecCCccccCCCceEEecCCC
Q 018293 1 MTINP-NDAVIVCARNEDDVSHLEVYILEESD---GGD--PNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME 74 (358)
Q Consensus 1 l~~~p-~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 74 (358)
++|+| ++++|++|..++ .+.+|+... +.. ..+...| ...+.++.| +|++++|++|+.|
T Consensus 69 ~~~s~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~l~s~s~d 132 (437)
T 3gre_A 69 SAVSPGETPYLITGSDQG-----VIKIWNLKEIIVGEVYSSSLTYDC----SSTVTQITM-------IPNFDAFAVSSKD 132 (437)
T ss_dssp EEEECSSSCEEEEEETTS-----EEEEEEHHHHHTTCCCSCSEEEEC----SSCEEEEEE-------CTTSSEEEEEETT
T ss_pred EEECCCCCCEEEEecCCc-----eEEEeECcccccCcccceeeeccC----CCCEEEEEE-------eCCCCEEEEEeCC
Confidence 46899 999999998776 777777654 211 1222122 344456666 7899999999999
Q ss_pred CeEEEEEccc---ccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEe--cCCCCCcEEEEEEcCCeEEE
Q 018293 75 PAIEIWDLDV---IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA--WNKEFRNILASASADKQVKI 149 (358)
Q Consensus 75 g~i~vw~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~l~s~~~dg~v~i 149 (358)
|.|++||+.. ++....... ...........++...+.++. ++++ +.+|++|+.|+.|++
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i 196 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNC---------------ECIRKINLKNFGKNEYAVRMRAFVNEE-KSLLVALTNLSRVII 196 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEE---------------EEEEEEEGGGGSSCCCEEEEEEEECSS-CEEEEEEETTSEEEE
T ss_pred CEEEEEEeccccCCceeecccc---------------ceeEEEEccCcccccCceEEEEEEcCC-CCEEEEEeCCCeEEE
Confidence 9999999952 222111000 000000000111567788887 5677 679999999999999
Q ss_pred EECCCCceeeeecc--cccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-eecCCeeeEEEcCC---CCCe
Q 018293 150 WDVAAGKCNLTLEH--HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPH---AEHS 223 (358)
Q Consensus 150 wd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~---~~~~ 223 (358)
||+++++++..+.. |...|++++|+|++ .+|++++.||.|++||++.++...... .+...|.+++|+|. ++.+
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~ 275 (437)
T 3gre_A 197 FDIRTLERLQIIENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVI 275 (437)
T ss_dssp EETTTCCEEEEEECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEE
T ss_pred EeCCCCeeeEEEccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccE
Confidence 99999999999987 88999999999998 899999999999999999876655332 56678999977763 3558
Q ss_pred EEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe------------------------e--cCCceeEEEecCCCCcEEE
Q 018293 224 FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH------------------------A--HDKAVCTISYNPLVPNLLA 277 (358)
Q Consensus 224 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~------------------------~--~~~~i~~i~~~~~~~~~l~ 277 (358)
+++++.||.|++||+++++ ....+. + |...|++++|+ ++ .+|+
T Consensus 276 l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~ 344 (437)
T 3gre_A 276 VVGGSSKTFLTIWNFVKGH---------CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILL 344 (437)
T ss_dssp EEEESTTEEEEEEETTTTE---------EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEE
T ss_pred EEEEcCCCcEEEEEcCCCc---------EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEE
Confidence 9999999999999998763 233322 2 66778999999 55 8999
Q ss_pred EEeCCCcEEEEecCCCCceeeEec-----------------------------------CCCCceeEEEEEcCC--CCeE
Q 018293 278 TGSTDKMVKLWDLSNNQPSCIASR-----------------------------------NPKAGAVFSVAFSED--SPFV 320 (358)
Q Consensus 278 ~~~~dg~i~i~d~~~~~~~~~~~~-----------------------------------~~~~~~v~~~~~~~~--~~~~ 320 (358)
+|+.|+.|++||+.+++....... ..|...|++++|+++ +. +
T Consensus 345 s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~-~ 423 (437)
T 3gre_A 345 TDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETP-L 423 (437)
T ss_dssp EEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSE-E
T ss_pred ecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCce-E
Confidence 999999999999998764332221 128889999999998 55 7
Q ss_pred EEEEccCCeEEEEE
Q 018293 321 LAIGGSKGKLEIWD 334 (358)
Q Consensus 321 l~~~~~dg~i~vw~ 334 (358)
|++|+.||.|+||+
T Consensus 424 l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 424 LVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEcCCceEEEeC
Confidence 99999999999995
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.4e-36 Score=265.27 Aligned_cols=273 Identities=21% Similarity=0.378 Sum_probs=217.9
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~ 81 (358)
.+.++++.+++|..++ .+.+|+...+.....+..| ...+.++.| ++++|++|+.||.|++||
T Consensus 138 ~~~~d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~~h----~~~v~~l~~---------~~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDN-----TIKIWDKNTLECKRILTGH----TGSVLCLQY---------DERVIITGSSDSTVRVWD 199 (435)
T ss_dssp EEECCSSEEEEEESSS-----CEEEEESSSCCEEEEECCC----SSCEEEEEC---------CSSEEEEEETTSCEEEEE
T ss_pred EEEECCCEEEEEeCCC-----eEEEEeCCCCeEEEEEcCC----CCcEEEEEE---------CCCEEEEEcCCCeEEEEE
Confidence 3567899999998887 7888887765333333323 223345533 788999999999999999
Q ss_pred cccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCcee---
Q 018293 82 LDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN--- 158 (358)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~--- 158 (358)
+.+++.. ..+.+|...|.+++|+++ ++++|+.||.|++||+.+++..
T Consensus 200 ~~~~~~~---------------------------~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~ 249 (435)
T 1p22_A 200 VNTGEML---------------------------NTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMASPTDITLR 249 (435)
T ss_dssp SSSCCEE---------------------------EEECCCCSCEEEEECCTT---EEEEEETTSCEEEEECSSSSCCEEE
T ss_pred CCCCcEE---------------------------EEEcCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCCCCCceee
Confidence 9764432 244579999999999753 8999999999999999988655
Q ss_pred eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEc
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~ 238 (358)
..+.+|...|.+++| ++ .++++++.||.|++||+++++.......+...+.++.|++ .++++|+.||.|++||+
T Consensus 250 ~~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 250 RVLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp EEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET---TEEEEEETTSCEEEEET
T ss_pred eEecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCC---CEEEEEeCCCeEEEEEC
Confidence 667889999999999 44 7899999999999999999888777777889999999953 58999999999999999
Q ss_pred ccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc-------eeeEecCCCCceeEEE
Q 018293 239 RTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-------SCIASRNPKAGAVFSV 311 (358)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~~~~v~~~ 311 (358)
+++ ..+..+.+|...|.+++| ++ .+|++|+.||.|++||++++.. .....+..|.+.|.++
T Consensus 324 ~~~---------~~~~~~~~h~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 391 (435)
T 1p22_A 324 ECG---------ACLRVLEGHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL 391 (435)
T ss_dssp TTC---------CEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCE
T ss_pred CCC---------CEEEEEeCCcCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEE
Confidence 987 778889999999999999 34 7999999999999999876431 1566778899999999
Q ss_pred EEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 312 AFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 312 ~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
+| ++. .|++++.||.|++||+.+......
T Consensus 392 ~~--~~~-~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 392 QF--DEF-QIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp EE--CSS-CEEECCSSSEEEEEC---------
T ss_pred Ee--CCC-EEEEEeCCCEEEEEECCCCCCccc
Confidence 99 566 488999999999999988765543
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-37 Score=272.66 Aligned_cols=238 Identities=12% Similarity=0.124 Sum_probs=184.4
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCC-----CcE
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-----RNI 137 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----~~~ 137 (358)
|+++.|++++.|++|+||++.+++.... ....+.+|.+.|.+++|+|++ +.+
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~-----------------------~~~~l~~~~~~V~~v~wsp~~~~~~~~~~ 227 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCV-----------------------KVQTIVHSFGEVWDLKWHEGCHAPHLVGC 227 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEE-----------------------EEEEEEECCCSEEEEEECSSCCCSSSSCE
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCce-----------------------EEEEEEecCCcEEEEEECCCCCCCCCCce
Confidence 4445566677899999999976432110 111234578899999999962 469
Q ss_pred EEEEEcCCeEEEEECCCCce-----------eeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc-ccee
Q 018293 138 LASASADKQVKIWDVAAGKC-----------NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKW 205 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~ 205 (358)
||+++.||+|++||+.+++. ...+.+|...|++++|+++ ..|++|+.||+|++||++++... ....
T Consensus 228 LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~~~~ 305 (524)
T 2j04_B 228 LSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSFYDQ 305 (524)
T ss_dssp EEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSEEEE
T ss_pred EEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceEEee
Confidence 99999999999999987642 2367789999999999985 47999999999999999976543 3356
Q ss_pred eecCCeeeE--EEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCC--ceeEEEecCCCCcEEEEEeC
Q 018293 206 AVAADVESL--AWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK--AVCTISYNPLVPNLLATGST 281 (358)
Q Consensus 206 ~~~~~i~~~--~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~i~~i~~~~~~~~~l~~~~~ 281 (358)
.|...|.++ +|+|++.++|++++.|++|++||+++. .....+.+|.. .|.+++|+|++ ..+++++.
T Consensus 306 ~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~---------~~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~~ 375 (524)
T 2j04_B 306 VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI---------ATTKTTVSRFRGSNLVPVVYCPQI-YSYIYSDG 375 (524)
T ss_dssp CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH---------HHHCEEEEECSCCSCCCEEEETTT-TEEEEECS
T ss_pred cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC---------CcccccccccccCcccceEeCCCc-CeEEEeCC
Confidence 788999999 567744379999999999999999986 55556666653 58899999998 78999999
Q ss_pred CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 282 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 282 dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
|++|++||++++. +...+.+|.+.|++++|+|++++ |++|+.||+|++||+..+
T Consensus 376 d~tv~lwd~~~~~--~~~~l~gH~~~V~sva~Sp~g~~-l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 376 ASSLRAVPSRAAF--AVHPLVSRETTITAIGVSRLHPM-VLAGSADGSLIITNAARR 429 (524)
T ss_dssp SSEEEEEETTCTT--CCEEEEECSSCEEEEECCSSCCB-CEEEETTTEEECCBSCSS
T ss_pred CCcEEEEECcccc--cceeeecCCCceEEEEeCCCCCe-EEEEECCCEEEEEechHh
Confidence 9999999999877 34456679999999999999995 899999999999998653
No 73
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=269.14 Aligned_cols=254 Identities=16% Similarity=0.282 Sum_probs=195.5
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCc------------ccEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT------------DSVLG 127 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~ 127 (358)
+|+|+|++||+|+.||.|+||++.+.+.... ...........+.+|. ..|++
T Consensus 35 ~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~----------------~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~ 98 (447)
T 3dw8_B 35 EFNHSGELLATGDKGGRVVIFQQEQENKIQS----------------HSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK 98 (447)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECC-----C----------------CCCCCEEEEEEEECCCCEEEGGGTEEECCCCCE
T ss_pred EECCCCCEEEEEcCCCeEEEEEecCCCCCCc----------------ccccceeEecccccccccccccccccccCceEE
Confidence 3389999999999999999999986542110 0011233445666787 88999
Q ss_pred EecCCCCC-cEEEEEEcCCeEEEEECCCCcee---------------------------------------ee-eccccc
Q 018293 128 LAWNKEFR-NILASASADKQVKIWDVAAGKCN---------------------------------------LT-LEHHTD 166 (358)
Q Consensus 128 ~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~---------------------------------------~~-~~~~~~ 166 (358)
++|+|++. .+|++++.|++|++||+.+++.. .. ..+|..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 99999942 68999999999999998764432 12 357999
Q ss_pred ceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC-cc-------ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEc
Q 018293 167 KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH-SG-------FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDI 238 (358)
Q Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~-------~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~ 238 (358)
.|.+++|+|++ .+|+++ .|+.|++||++.... .. ....|...|.+++|+|++..++++++.||.|++||+
T Consensus 179 ~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 179 HINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 99999999998 888888 799999999984332 21 133677889999999976579999999999999999
Q ss_pred ccCCCCCCCCCCCccEEEeecCC------------ceeEEEecCCCCcEEEEEeCCCcEEEEecCC-CCceeeEecCCCC
Q 018293 239 RTAKSDPDSTSQQSSFTLHAHDK------------AVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIASRNPKA 305 (358)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~------------~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~ 305 (358)
++..... .....+..|.. .|.+++|+|++ .+|++++. +.|++||+++ +++ +..+..|.
T Consensus 257 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~~~~~~--~~~~~~~~ 327 (447)
T 3dw8_B 257 RASALCD-----RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-LSVKVWDLNMENRP--VETYQVHE 327 (447)
T ss_dssp TTCSSSC-----TTCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-SEEEEEETTCCSSC--SCCEESCG
T ss_pred cCCcccc-----ceeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEeeC-CeEEEEeCCCCccc--cceeeccc
Confidence 9873211 22567777765 89999999998 89999998 9999999987 653 34444554
Q ss_pred ce---------------eEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcc
Q 018293 306 GA---------------VFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 306 ~~---------------v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 341 (358)
.. +..++|+|++++ |++|+.||.|++||+.+++.+
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~-l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSV-VMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSE-EEEECSTTEEEEEETTTCCEE
T ss_pred cccccccccccccccccceEEEECCCCCE-EEEeccCCEEEEEEcCCCcce
Confidence 31 334999999995 899999999999999998765
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.9e-36 Score=266.72 Aligned_cols=278 Identities=16% Similarity=0.259 Sum_probs=223.7
Q ss_pred ccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEEc
Q 018293 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDL 82 (358)
Q Consensus 3 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~ 82 (358)
+.++++.|++|..++ .+.+|+...+.....+..| ...+.++.| ++++ +|++|+.||.|++||+
T Consensus 128 ~~~~~~~l~sgs~dg-----~i~vwd~~~~~~~~~~~~h----~~~V~~l~~-------~~~~-~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 128 LQFEDNYVITGADDK-----MIRVYDSINKKFLLQLSGH----DGGVWALKY-------AHGG-ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp EEEETTEEEEEETTS-----CEEEEETTTTEEEEEECCC----SSCEEEEEE-------CSTT-EEEEEETTSCEEEEET
T ss_pred EEECCCEEEEEcCCC-----cEEEEECCCCcEEEEEeCC----CcCEEEEEE-------cCCC-EEEEEeCCCCEEEEEC
Confidence 455778999998877 7888887765322222222 334456666 6777 9999999999999999
Q ss_pred ccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCC--CCCcEEEEEEcCCeEEEEECCCCce---
Q 018293 83 DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK--EFRNILASASADKQVKIWDVAAGKC--- 157 (358)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~dg~v~iwd~~~~~~--- 157 (358)
.+++. ...+.+|...|.+++|++ + +.++++|+.||.|++||+.+++.
T Consensus 191 ~~~~~---------------------------~~~~~~h~~~v~~l~~~~~~~-~~~l~s~s~d~~i~vwd~~~~~~~~~ 242 (464)
T 3v7d_B 191 KKGCC---------------------------THVFEGHNSTVRCLDIVEYKN-IKYIVTGSRDNTLHVWKLPKESSVPD 242 (464)
T ss_dssp TTTEE---------------------------EEEECCCSSCEEEEEEEESSS-CEEEEEEETTSCEEEEECCCCCCC--
T ss_pred CCCcE---------------------------EEEECCCCCccEEEEEecCCC-CCEEEEEcCCCcEEEeeCCCCccccc
Confidence 75432 224557999999999984 4 67999999999999999987653
Q ss_pred --------------------eeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEc
Q 018293 158 --------------------NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWD 217 (358)
Q Consensus 158 --------------------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 217 (358)
+..+.+|...+.++ ++++ .++++++.||.|++||+++.+.......+...+.+++|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 319 (464)
T 3v7d_B 243 HGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHG-NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD 319 (464)
T ss_dssp ----CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEET-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE
T ss_pred ccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCC-CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEc
Confidence 44567788888877 4556 789999999999999999888777667788999999999
Q ss_pred CCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCcee
Q 018293 218 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC 297 (358)
Q Consensus 218 ~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 297 (358)
|+ +..+++|+.||.|++||++++ ..+..+.+|...|.+++|++ .+|++++.||.|++||+++...
T Consensus 320 ~~-~~~l~sg~~dg~i~vwd~~~~---------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~-- 384 (464)
T 3v7d_B 320 HE-RKRCISASMDTTIRIWDLENG---------ELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSR-- 384 (464)
T ss_dssp TT-TTEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCE--
T ss_pred CC-CCEEEEEeCCCcEEEEECCCC---------cEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCce--
Confidence 95 558999999999999999987 77888999999999999984 7999999999999999998763
Q ss_pred eEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccc
Q 018293 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 298 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
.... .+...+..++|+++++ ++++|+ ||.|++||+.+++.+.+...
T Consensus 385 ~~~~-~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~~~~~~~~ 430 (464)
T 3v7d_B 385 KFSY-HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGKLVHANIL 430 (464)
T ss_dssp EEEE-ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCCEEESCTT
T ss_pred eeee-cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCcEEehhhc
Confidence 2222 2556677889999999 577777 89999999999998876333
No 75
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.8e-36 Score=257.09 Aligned_cols=243 Identities=16% Similarity=0.194 Sum_probs=201.3
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 141 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 141 (358)
+|++++|++|+.||.|++||+.+.+ ......+.+|...|.+++|+|+ +.+|+++
T Consensus 17 s~~~~~l~~~~~d~~v~i~~~~~~~-------------------------~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~ 70 (372)
T 1k8k_C 17 NKDRTQIAICPNNHEVHIYEKSGNK-------------------------WVQVHELKEHNGQVTGVDWAPD-SNRIVTC 70 (372)
T ss_dssp CTTSSEEEEECSSSEEEEEEEETTE-------------------------EEEEEEEECCSSCEEEEEEETT-TTEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCc-------------------------EEeeeeecCCCCcccEEEEeCC-CCEEEEE
Confidence 8999999999999999999997532 1123345579999999999998 6799999
Q ss_pred EcCCeEEEEECCCCceeee--ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc----cceeeecCCeeeEE
Q 018293 142 SADKQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS----GFKWAVAADVESLA 215 (358)
Q Consensus 142 ~~dg~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~i~~~~ 215 (358)
+.||.|++||+++++.... +..|...|.+++|+|++ .++++++.|+.|++||++..... .....+...+.+++
T Consensus 71 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 71 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 149 (372)
T ss_dssp ETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE
T ss_pred cCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEE
Confidence 9999999999988865443 36688999999999998 89999999999999999987642 11234678899999
Q ss_pred EcCCCCCeEEEEecCCeEEEEEcccCCCCCC---------CCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEE
Q 018293 216 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD---------STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVK 286 (358)
Q Consensus 216 ~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~ 286 (358)
|+|+ +.++++++.||.|++||++....... .........+..|...|.+++|+|++ .+|++++.||.|+
T Consensus 150 ~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~ 227 (372)
T 1k8k_C 150 WHPN-SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG-SRVAWVSHDSTVC 227 (372)
T ss_dssp ECTT-SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-SEEEEEETTTEEE
T ss_pred EcCC-CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC-CEEEEEeCCCEEE
Confidence 9995 56999999999999999763221100 11125667777899999999999998 8999999999999
Q ss_pred EEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 287 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 287 i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
+||+++++ .+..+..|..+|.+++|+|+++ ++++| .|+.|++|++.+
T Consensus 228 i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 228 LADADKKM--AVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEGGGTT--EEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEET
T ss_pred EEECCCCc--eeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccC
Confidence 99999887 5666778888999999999998 47766 899999999988
No 76
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.1e-36 Score=271.74 Aligned_cols=292 Identities=13% Similarity=0.207 Sum_probs=232.0
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCC----CCCceEeeceeecCCc-ccceeeecCCccccC--CCceEEecCC
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDG----GDPNLYVHHHIIIPAF-PLCMAWLDCPLKDRE--KGNFMAVGSM 73 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~--~~~~l~~g~~ 73 (358)
++|+|++++|+++. ++ .+.+|+...+ .....+..| ... +.++.| +| ++++|++|+.
T Consensus 24 ~~~spdg~~l~~~~-~~-----~v~v~~~~~~~~~~~~~~~~~~h----~~~~v~~~~~-------sp~~~~~~l~s~~~ 86 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-GK-----SAFVRCLDDGDSKVPPVVQFTGH----GSSVVTTVKF-------SPIKGSQYLCSGDE 86 (615)
T ss_dssp CEEETTTTEEEEEE-TT-----EEEEEECCSSCCSSCSEEEECTT----TTSCEEEEEE-------CSSTTCCEEEEEET
T ss_pred EEECCCCCEEEEec-CC-----eEEEEECCCCCCccccceEEecC----CCceEEEEEE-------CcCCCCCEEEEecC
Confidence 57999999999996 44 6778887654 222233223 233 446655 89 9999999999
Q ss_pred CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcC----CeEEE
Q 018293 74 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD----KQVKI 149 (358)
Q Consensus 74 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----g~v~i 149 (358)
||.|++||+.++..... ........+..|...|.+++|+|+ +.+|++++.+ +.|.+
T Consensus 87 dg~v~vw~~~~~~~~~~-------------------~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~~~~~~v~~ 146 (615)
T 1pgu_A 87 SGKVIVWGWTFDKESNS-------------------VEVNVKSEFQVLAGPISDISWDFE-GRRLCVVGEGRDNFGVFIS 146 (615)
T ss_dssp TSEEEEEEEEEEGGGTE-------------------EEEEEEEEEECCSSCEEEEEECTT-SSEEEEEECCSSCSEEEEE
T ss_pred CCEEEEEeCCCCccccc-------------------ccccccchhhcccccEEEEEEeCC-CCEEEEeccCCCCccEEEE
Confidence 99999999965421110 012334455679999999999999 6789999887 68888
Q ss_pred EECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecC---CeeeEEEcCCCCCeEEE
Q 018293 150 WDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA---DVESLAWDPHAEHSFVV 226 (358)
Q Consensus 150 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~ 226 (358)
|| .++.+..+.+|...|.+++|+|++...+++++.|+.|++||+.+.+.......+.. .|.+++|+|+++.++++
T Consensus 147 ~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 224 (615)
T 1pgu_A 147 WD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT 224 (615)
T ss_dssp TT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE
T ss_pred EE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEE
Confidence 88 66788889999999999999999955899999999999999988877666666777 89999999963669999
Q ss_pred EecCCeEEEEEcccCCCCCCCCCCCccEEE-e---ecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC
Q 018293 227 SLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-H---AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN 302 (358)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~---~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 302 (358)
++.||.|++||++++ +.+..+ . .|...|.+++|+ ++ .+|++++.|+.|++||+++++. ...+.
T Consensus 225 ~~~dg~i~vwd~~~~---------~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~~~~--~~~~~ 291 (615)
T 1pgu_A 225 VGSDRKISCFDGKSG---------EFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGADATIRVWDVTTSKC--VQKWT 291 (615)
T ss_dssp EETTCCEEEEETTTC---------CEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETTSEEEEEETTTTEE--EEEEE
T ss_pred EeCCCeEEEEECCCC---------CEeEEecccccccCCceEEEEEc-CC-CEEEEEcCCCcEEEEECCCCcE--EEEEc
Confidence 999999999999887 666677 5 899999999999 76 8999999999999999998874 33333
Q ss_pred CC----CceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccc
Q 018293 303 PK----AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 303 ~~----~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
.+ ...+.++.|. ++. .+++++.||.|++||+.+++.+.....
T Consensus 292 ~~~~~~~~~~~~~~~~-~~~-~l~~~~~~g~i~~~d~~~~~~~~~~~~ 337 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVAT-GNG-RIISLSLDGTLNFYELGHDEVLKTISG 337 (615)
T ss_dssp CCTTCGGGCEEEEEEE-ETT-EEEEEETTSCEEEEETTEEEEEEEECC
T ss_pred CCCCcccCceeEEEeC-CCC-eEEEEECCCCEEEEECCCCcEEEEEeC
Confidence 33 4678888886 777 588899999999999998776655443
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.2e-36 Score=259.21 Aligned_cols=253 Identities=15% Similarity=0.227 Sum_probs=210.0
Q ss_pred CcccceeeecCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEE
Q 018293 47 AFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL 126 (358)
Q Consensus 47 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 126 (358)
..+.++.| +| ++|++|+.||.|++|++.+.+...+ ......+.+|...|.
T Consensus 17 ~~i~~~~~-------~~--~~l~s~~~dg~i~iw~~~~~~~~~~---------------------~~~~~~~~~h~~~v~ 66 (397)
T 1sq9_A 17 ADIFSVSA-------CN--SFTVSCSGDGYLKVWDNKLLDNENP---------------------KDKSYSHFVHKSGLH 66 (397)
T ss_dssp SCEEEEEE-------CS--SEEEEEETTSEEEEEESBCCTTCCG---------------------GGGEEEEECCTTCEE
T ss_pred cCeEEEEe-------cC--CeEEEEcCCCEEEEEECCCcccccC---------------------CCcceEEecCCCcEE
Confidence 34456666 66 7999999999999999986542211 223345568999999
Q ss_pred EEecCCC---CC---cEEEEEEcCCeEEEEECCCCce-----eeeeccc-----ccceeeEEEc----CCCCcE-EEEEe
Q 018293 127 GLAWNKE---FR---NILASASADKQVKIWDVAAGKC-----NLTLEHH-----TDKVQAVAWN----HHSPQI-LLSGS 185 (358)
Q Consensus 127 ~~~~~~~---~~---~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~~-l~~~~ 185 (358)
+++|+|+ ++ .+|++++.||.|++||+.+++. ...+..| ...|.+++|+ |++ .+ |++++
T Consensus 67 ~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~ 145 (397)
T 1sq9_A 67 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATD 145 (397)
T ss_dssp EEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEE
T ss_pred EEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEe
Confidence 9999997 24 5899999999999999998887 7888888 5899999999 988 77 99999
Q ss_pred CCCcEEEEEccc------CCCcc-----cee-------eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCC
Q 018293 186 FDRSVVMKDARI------STHSG-----FKW-------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS 247 (358)
Q Consensus 186 ~dg~i~i~d~~~------~~~~~-----~~~-------~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~ 247 (358)
.||.|++||++. .+... ... .+...+.+++|+|++ ++++++.||.|++||+++.
T Consensus 146 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~------ 217 (397)
T 1sq9_A 146 VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTL------ 217 (397)
T ss_dssp TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT------
T ss_pred CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC------
Confidence 999999999998 65554 332 367889999999965 9999999999999999986
Q ss_pred CCCCccEEEee---c---CCceeEEEecCCCCcEEEEEeCC---CcEEEEecCCCCceeeEecCC-------------CC
Q 018293 248 TSQQSSFTLHA---H---DKAVCTISYNPLVPNLLATGSTD---KMVKLWDLSNNQPSCIASRNP-------------KA 305 (358)
Q Consensus 248 ~~~~~~~~~~~---~---~~~i~~i~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~-------------~~ 305 (358)
..+..+.. | ...|.+++|+|++ .+|++++.| |.|++||+++++ .+..+.. |.
T Consensus 218 ---~~~~~~~~~~~h~~~~~~i~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 218 ---RPLYNFESQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp ---EEEEEEECCC---CCCCCEEEEEECSST-TEEEEEEEETTEEEEEEEETTTCC--EEEEECBC--------CCBSBS
T ss_pred ---ceeEEEeccccccccCCccceEEECCCC-CEEEEEecCCCCceEEEEECCCCc--ccceeccCcccccccccccccC
Confidence 67778888 8 9999999999998 899999999 999999999887 4556666 88
Q ss_pred ceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 306 GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 306 ~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
..|.+++|+|+++ +|++++.||.|++||+.+++.+....
T Consensus 292 ~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 292 SWVMSLSFNDSGE-TLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp SCEEEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEECCCCC-EEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 9999999999999 48899999999999999988776655
No 78
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.7e-36 Score=292.68 Aligned_cols=285 Identities=18% Similarity=0.292 Sum_probs=229.0
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+++.++++..++ .+.+|+...+.....+..| ...+.++.| +|++++|++|+.||.|+||
T Consensus 621 ~~~s~~~~~l~s~~~d~-----~i~vw~~~~~~~~~~~~~h----~~~v~~~~~-------s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 621 ACFSQDGQRIASCGADK-----TLQVFKAETGEKLLDIKAH----EDEVLCCAF-------SSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp EEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCC----SSCEEEEEE-------CTTSSEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEEeCCC-----eEEEEECCCCCEEEEeccC----CCCEEEEEE-------ecCCCEEEEEeCCCeEEEE
Confidence 47899999999998776 7888888765322222222 233345555 8999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCC-CCcEEEEEEcCCeEEEEECCCCceee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE-FRNILASASADKQVKIWDVAAGKCNL 159 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~ 159 (358)
|+.+++.. ..+.+|...|.+++|+|+ +..++++|+.|+.|++||+.+++++.
T Consensus 685 d~~~~~~~---------------------------~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~ 737 (1249)
T 3sfz_A 685 DSATGKLV---------------------------HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN 737 (1249)
T ss_dssp ETTTCCEE---------------------------EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE
T ss_pred ECCCCceE---------------------------EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh
Confidence 99764432 244579999999999995 25589999999999999999999999
Q ss_pred eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc------------------------------------
Q 018293 160 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF------------------------------------ 203 (358)
Q Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~------------------------------------ 203 (358)
.+.+|...|.+++|+|++ .++++++.||.|++||++++.....
T Consensus 738 ~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 816 (1249)
T 3sfz_A 738 TMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA 816 (1249)
T ss_dssp EECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE
T ss_pred eecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE
Confidence 999999999999999999 8999999999999999876532110
Q ss_pred -------------------eeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCcee
Q 018293 204 -------------------KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC 264 (358)
Q Consensus 204 -------------------~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~ 264 (358)
...+...+.+++|+|+ +..+++++.||.|++||+.++ .....+.+|...|.
T Consensus 817 ~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~dg~v~vwd~~~~---------~~~~~~~~h~~~v~ 886 (1249)
T 3sfz_A 817 AKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY-DHLAVIALSQYCVELWNIDSR---------LKVADCRGHLSWVH 886 (1249)
T ss_dssp ETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS-TTEEEEECSSSCEEEEETTTT---------EEEEEECCCSSCEE
T ss_pred cCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC-CCEEEEEeCCCeEEEEEcCCC---------ceeeecCCCccceE
Confidence 0134567889999995 568999999999999999886 67778888999999
Q ss_pred EEEecCCCCcEEEEEeCCCcEEEEecCCC---------------------------------------------------
Q 018293 265 TISYNPLVPNLLATGSTDKMVKLWDLSNN--------------------------------------------------- 293 (358)
Q Consensus 265 ~i~~~~~~~~~l~~~~~dg~i~i~d~~~~--------------------------------------------------- 293 (358)
+++|+|++ .+|++++.||.|++||+.+.
T Consensus 887 ~v~~spdg-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 965 (1249)
T 3sfz_A 887 GVMFSPDG-SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVS 965 (1249)
T ss_dssp EEEECTTS-SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEE
T ss_pred EEEECCCC-CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEE
Confidence 99999987 78888888988888885320
Q ss_pred --------------------------CceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcc
Q 018293 294 --------------------------QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 294 --------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 341 (358)
.........+|...|.+++|+|++++ +++++.||.|++||+.+++..
T Consensus 966 ~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~-l~s~~~dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 966 CCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKT-LISSSEDSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSC-EEEECSSSBEEEEETTTTEEE
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCE-EEEEcCCCEEEEEECCCCceE
Confidence 00123445678889999999999995 889999999999999987655
No 79
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-35 Score=250.58 Aligned_cols=277 Identities=15% Similarity=0.174 Sum_probs=217.8
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCc-eEEecCCCCeEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGN-FMAVGSMEPAIEI 79 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~i~v 79 (358)
++|+|+++.|+++..++ .+++|+...+.. .............+.++.| +|+++ +|++|+.||.|++
T Consensus 17 ~~~s~~~~~l~~~~~d~-----~v~iw~~~~~~~-~~~~~~~~~~~~~v~~~~~-------~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 17 IKIIPSKSLLLITSWDG-----SLTVYKFDIQAK-NVDLLQSLRYKHPLLCCNF-------IDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp EEEEGGGTEEEEEETTS-----EEEEEEEETTTT-EEEEEEEEECSSCEEEEEE-------EESSSEEEEEEETTSCEEE
T ss_pred EEEcCCCCEEEEEcCCC-----eEEEEEeCCCCc-cccceeeeecCCceEEEEE-------CCCCCcEEEEEcCCCeEEE
Confidence 46899999999997776 677777665421 1111112233444556666 78999 9999999999999
Q ss_pred EEc-ccccCcCceeecCCcccccccccccCCceeccccccCC--CcccEEEEecCCCCCcEEEEEEcCCeEEEEECCC--
Q 018293 80 WDL-DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS--HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA-- 154 (358)
Q Consensus 80 w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-- 154 (358)
||+ .+... ..+.+ |...|.+++|+| +.+|++++.|+.|++||+++
T Consensus 84 wd~~~~~~~----------------------------~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~ 133 (342)
T 1yfq_A 84 VDLIGSPSF----------------------------QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYG 133 (342)
T ss_dssp ECSSSSSSE----------------------------EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHT
T ss_pred EEeccCCce----------------------------EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccc
Confidence 998 64321 23446 999999999999 46999999999999999988
Q ss_pred -------CceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEccc-CCCc--cceeeecCCeeeEEEcC-CCCCe
Q 018293 155 -------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHS--GFKWAVAADVESLAWDP-HAEHS 223 (358)
Q Consensus 155 -------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~--~~~~~~~~~i~~~~~~~-~~~~~ 223 (358)
++++..+. |...+.+++|+|++ +++++.|+.|++||++. .... .....+...+.+++|+| ++ .+
T Consensus 134 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~~ 208 (342)
T 1yfq_A 134 DGVIAVKNLNSNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ-EG 208 (342)
T ss_dssp TBCEEEEESCSSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG-CE
T ss_pred cccccccCCeeeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC-CE
Confidence 77777777 88999999999875 89999999999999998 5432 22345677899999999 75 58
Q ss_pred EEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCC---------ceeEEEecCCCCcEEEEEeCCCcEEEEecCCCC
Q 018293 224 FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK---------AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294 (358)
Q Consensus 224 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~---------~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 294 (358)
+++++.||.|++|+++..... ........+..|.. .|.+++|+|++ .+|++++.||.|++||+.+++
T Consensus 209 l~~~~~dg~i~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 209 YACSSIDGRVAVEFFDDQGDD---YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp EEEEETTSEEEEEECCTTCCS---TTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEETTTTE
T ss_pred EEEEecCCcEEEEEEcCCCcc---cccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEEEEcCccHh
Confidence 999999999999999865100 00145666777755 99999999998 899999999999999999887
Q ss_pred ceeeEecCCC-CceeEEEEEcCCCCeEEEEEccCCe-EEEEE
Q 018293 295 PSCIASRNPK-AGAVFSVAFSEDSPFVLAIGGSKGK-LEIWD 334 (358)
Q Consensus 295 ~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~-i~vw~ 334 (358)
.+..+..| ..+|.+++ |+++ +|++++.||. .+.|.
T Consensus 285 --~~~~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 285 --KIKNFAKFNEDSVVKIA--CSDN-ILCLATSDDTFKTNAA 321 (342)
T ss_dssp --EEEECCCCSSSEEEEEE--ECSS-EEEEEEECTHHHHCSS
T ss_pred --HhhhhhcccCCCceEec--CCCC-eEEEEecCCccccccc
Confidence 56678888 99999999 9999 5899999998 44444
No 80
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.7e-36 Score=256.73 Aligned_cols=249 Identities=17% Similarity=0.171 Sum_probs=196.8
Q ss_pred cccCCC-ceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEE
Q 018293 60 KDREKG-NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 138 (358)
Q Consensus 60 ~~s~~~-~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 138 (358)
+|+|++ ++|++|+.||.|+|||+.+.+... .....+|...|.+++|+|+++.+|
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-------------------------~~~~~~h~~~v~~~~~~~~~~~~l 134 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDVQNKTS-------------------------FIQGMGPGDAITGMKFNQFNTNQL 134 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTSTTCEE-------------------------EECCCSTTCBEEEEEEETTEEEEE
T ss_pred EECCCCCCEEEEEcCCCeEEEEeCCCcccce-------------------------eeecCCcCCceeEEEeCCCCCCEE
Confidence 348898 999999999999999997543322 112346999999999999547899
Q ss_pred EEEEcCCeEEEEECCCCceeeeecc---cccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEE
Q 018293 139 ASASADKQVKIWDVAAGKCNLTLEH---HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLA 215 (358)
Q Consensus 139 ~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~ 215 (358)
++++.|+.|++||+++ +.+..+.. |...|.+++|+|++ .++++++.|+.|++||++ ++.......|...|.+++
T Consensus 135 ~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~ 211 (383)
T 3ei3_B 135 FVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAE 211 (383)
T ss_dssp EEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEE
T ss_pred EEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEE
Confidence 9999999999999986 44555543 44789999999999 899999999999999994 445555667889999999
Q ss_pred EcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecC-CCCcEEEEEeCCCcEEEEecCCCC
Q 018293 216 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP-LVPNLLATGSTDKMVKLWDLSNNQ 294 (358)
Q Consensus 216 ~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~~l~~~~~dg~i~i~d~~~~~ 294 (358)
|+|++..++++++.|+.|++||+++..... .....+ .|...|.+++|+| ++ .+|++++.|+.|++||+++++
T Consensus 212 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-----~~~~~~-~~~~~v~~~~~s~~~~-~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 212 FNPRCDWLMATSSVDATVKLWDLRNIKDKN-----SYIAEM-PHEKPVNAAYFNPTDS-TKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEGGGCCSTT-----CEEEEE-ECSSCEEEEEECTTTS-CEEEEEESSSEEEEEETTBTT
T ss_pred ECCCCCCEEEEEeCCCEEEEEeCCCCCccc-----ceEEEe-cCCCceEEEEEcCCCC-CEEEEEcCCCcEEEEECCCCc
Confidence 999776699999999999999999853211 334444 7999999999999 87 899999999999999999876
Q ss_pred ceeeEecC-----CCC----------ceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccc
Q 018293 295 PSCIASRN-----PKA----------GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 295 ~~~~~~~~-----~~~----------~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
........ .|. +.+..++|+|++++ +++.||.|++||+.+++.+..+..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 285 KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCEEEEECB
T ss_pred cccccccccccccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCceeeeecC
Confidence 43322211 112 34555777777763 778999999999999988776554
No 81
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.3e-36 Score=260.01 Aligned_cols=250 Identities=10% Similarity=0.116 Sum_probs=180.9
Q ss_pred ccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCC--------
Q 018293 61 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK-------- 132 (358)
Q Consensus 61 ~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-------- 132 (358)
+++++.+||+|+.|++|+|||..+++... ......+.+|.+.|++++|+|
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~----------------------~~~~~~~~gH~~~v~~v~~~p~~~~~~~~ 154 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIIT----------------------QHVLGGKSGHHNFVNDIDIADVYSADNRL 154 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEE----------------------EEEECTTTSCSSCEEEEEEEEEECTTCSE
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccce----------------------eeeecccCCCCCceEEEEEccccccccCC
Confidence 45678899999999999999997654322 223346779999999999987
Q ss_pred CCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc---------
Q 018293 133 EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF--------- 203 (358)
Q Consensus 133 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--------- 203 (358)
+ +++||+|+.|++|+|||+.++.++..+..|..++.+++|+|++..+|++++.|++|++||+++++....
T Consensus 155 d-~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~ 233 (393)
T 4gq1_A 155 A-EQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKN 233 (393)
T ss_dssp E-EEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSC
T ss_pred C-CCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCccc
Confidence 5 679999999999999999988888888889999999999999867899999999999999987653221
Q ss_pred ----------------eeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCC----------CCCccEEEe
Q 018293 204 ----------------KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDST----------SQQSSFTLH 257 (358)
Q Consensus 204 ----------------~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~----------~~~~~~~~~ 257 (358)
...+...+.++.|.+.++..+++++.|+.+++||+.......... .........
T Consensus 234 ~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 234 PWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp CCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEEC
T ss_pred ceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc
Confidence 123456788899875466799999999999999998763211000 000111111
Q ss_pred ecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 258 AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 258 ~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
.+...+..+.+.+.+..++++|+.||.|++||+.+++. ......|..+|.+++|+|||++ ||+++.+| +.+|.+..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~~~~~~V~svafspdG~~-LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS--NSIPIQLGMPIVDFCWHQDGSH-LAIATEGS-VLLTRLMG 389 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC--CEEEEECSSCEEEEEECTTSSE-EEEEESSE-EEEEEEGG
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE--EEEecCCCCcEEEEEEcCCCCE-EEEEeCCC-eEEEEEeC
Confidence 22222222323333335677888999999999998874 4445567789999999999994 88887665 77776643
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.3e-35 Score=258.38 Aligned_cols=271 Identities=21% Similarity=0.357 Sum_probs=223.5
Q ss_pred ccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEEc
Q 018293 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDL 82 (358)
Q Consensus 3 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~ 82 (358)
++++++.|++|..++ .+.+|+...+.....+..| ...+.++.| + +++|++|+.||.|++||+
T Consensus 125 ~~~~g~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~h----~~~v~~~~~-------~--~~~l~s~~~dg~i~vwd~ 186 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDN-----TLKVWSAVTGKCLRTLVGH----TGGVWSSQM-------R--DNIIISGSTDRTLKVWNA 186 (445)
T ss_dssp EEEETTEEEEEETTS-----CEEEEETTTCCEEEECCCC----SSCEEEEEE-------E--TTEEEEEETTSCEEEEET
T ss_pred EEEcCCEEEEEECCC-----cEEEEECCCCcEEEEEcCC----CCCEEEEEe-------c--CCEEEEEeCCCeEEEEEC
Confidence 567889999998877 7888887765322222222 223345544 3 679999999999999999
Q ss_pred ccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeec
Q 018293 83 DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE 162 (358)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 162 (358)
.+++.. ..+.+|...|.++.|++ ..+++|+.||.|++||+.+++.+..+.
T Consensus 187 ~~~~~~---------------------------~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~ 236 (445)
T 2ovr_B 187 ETGECI---------------------------HTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLM 236 (445)
T ss_dssp TTTEEE---------------------------EEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEE
T ss_pred CcCcEE---------------------------EEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEc
Confidence 764332 24557999999999964 479999999999999999999999999
Q ss_pred ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCC
Q 018293 163 HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAK 242 (358)
Q Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~ 242 (358)
+|...|.+++| ++ ..+++++.||.|++||+++++.......+...+.++.| ++..+++++.||.|++||++++
T Consensus 237 ~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~- 309 (445)
T 2ovr_B 237 GHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETG- 309 (445)
T ss_dssp CCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTC-
T ss_pred CCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCC-
Confidence 99999999999 45 78999999999999999988877666678889999999 3458999999999999999987
Q ss_pred CCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCC---CCceeEEEEEcCCCCe
Q 018293 243 SDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP---KAGAVFSVAFSEDSPF 319 (358)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~ 319 (358)
..+..+..|...+.++.+++ .++++|+.||.|++||+++++. +..+.. |...|.+++|++ +
T Consensus 310 --------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~--~- 373 (445)
T 2ovr_B 310 --------NCIHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTGQC--LQTLQGPNKHQSAVTCLQFNK--N- 373 (445)
T ss_dssp --------CEEEEECCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTCCE--EEEECSTTSCSSCEEEEEECS--S-
T ss_pred --------CEEEEEcCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCCcE--EEEEccCCCCCCCEEEEEECC--C-
Confidence 77888899999999988863 7999999999999999998874 444444 888999999964 4
Q ss_pred EEEEEccCCeEEEEEccCCCccccc
Q 018293 320 VLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 320 ~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
.+++|+.||.|++||+.+++.+...
T Consensus 374 ~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 374 FVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCceeeee
Confidence 5899999999999999999877665
No 83
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.6e-35 Score=247.29 Aligned_cols=251 Identities=17% Similarity=0.258 Sum_probs=208.1
Q ss_pred CcccceeeecCCccccCC-CceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccE
Q 018293 47 AFPLCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV 125 (358)
Q Consensus 47 ~~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 125 (358)
..+.+++| +|+ +++||+|+.||+|+|||+.+.+... ..+...+.+|...|
T Consensus 39 ~~V~~v~~-------sp~~~~~l~S~s~D~~i~vWd~~~~~~~~----------------------~~~~~~l~~h~~~V 89 (340)
T 4aow_A 39 GWVTQIAT-------TPQFPDMILSASRDKTIIMWKLTRDETNY----------------------GIPQRALRGHSHFV 89 (340)
T ss_dssp SCEEEEEE-------CTTCTTEEEEEETTSCEEEEEECCSSSCS----------------------EEEEEEECCCSSCE
T ss_pred CCEEEEEE-------eCCCCCEEEEEcCCCeEEEEECCCCCccc----------------------ceeeEEEeCCCCCE
Confidence 34456666 787 6899999999999999997644322 22334567899999
Q ss_pred EEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc-ce
Q 018293 126 LGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FK 204 (358)
Q Consensus 126 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~ 204 (358)
.+++|+|+ +.+|++++.|+.|++|+............+...+..+.+++++ .++++++.|+.+++||+....... ..
T Consensus 90 ~~~~~s~d-g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~ 167 (340)
T 4aow_A 90 SDVVISSD-GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQD 167 (340)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred EEEEECCC-CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEe
Confidence 99999999 6799999999999999999998888888888899999999998 889999999999999987654332 23
Q ss_pred eeecCCeeeEEEcCCCC-CeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC
Q 018293 205 WAVAADVESLAWDPHAE-HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 283 (358)
Q Consensus 205 ~~~~~~i~~~~~~~~~~-~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg 283 (358)
..+...+..++|+++.. .++++++.|+.|++||+++. .....+.+|..+|++++|+|++ .+|++|+.||
T Consensus 168 ~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---------~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~Dg 237 (340)
T 4aow_A 168 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC---------KLKTNHIGHTGYLNTVTVSPDG-SLCASGGKDG 237 (340)
T ss_dssp SSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTC
T ss_pred ccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC---------ceeeEecCCCCcEEEEEECCCC-CEEEEEeCCC
Confidence 45678899999998654 46788999999999999987 7788889999999999999998 8999999999
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
.|++||+++.+. +..+.. ...|.+++|+|++. +++++.|+.|++||+.++..+..
T Consensus 238 ~i~iwd~~~~~~--~~~~~~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~ 292 (340)
T 4aow_A 238 QAMLWDLNEGKH--LYTLDG-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDE 292 (340)
T ss_dssp EEEEEETTTTEE--EEEEEC-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEE
T ss_pred eEEEEEeccCce--eeeecC-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEe
Confidence 999999998874 444443 46799999999986 44577899999999988765544
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.7e-36 Score=280.49 Aligned_cols=249 Identities=20% Similarity=0.304 Sum_probs=215.0
Q ss_pred cccceeeecCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEE
Q 018293 48 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 127 (358)
Q Consensus 48 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 127 (358)
.+.++.| +|++++||+|+.||.|+|||+.++... ..+.+|...|.+
T Consensus 15 ~v~~i~~-------sp~~~~la~~~~~g~v~iwd~~~~~~~---------------------------~~~~~~~~~v~~ 60 (814)
T 3mkq_A 15 RVKGIDF-------HPTEPWVLTTLYSGRVEIWNYETQVEV---------------------------RSIQVTETPVRA 60 (814)
T ss_dssp CEEEEEE-------CSSSSEEEEEETTSEEEEEETTTTEEE---------------------------EEEECCSSCEEE
T ss_pred ceEEEEE-------CCCCCEEEEEeCCCEEEEEECCCCceE---------------------------EEEecCCCcEEE
Confidence 3446655 899999999999999999999754332 244579999999
Q ss_pred EecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC-CCccceee
Q 018293 128 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWA 206 (358)
Q Consensus 128 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~ 206 (358)
++|+|+ +.+|++|+.||.|++||+.+++.+..+.+|...|++++|+|++ .++++++.||.|++||+.++ ........
T Consensus 61 ~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 138 (814)
T 3mkq_A 61 GKFIAR-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEG 138 (814)
T ss_dssp EEEEGG-GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEEEC
T ss_pred EEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEEcC
Confidence 999999 6799999999999999999999999999999999999999999 88999999999999999887 33444556
Q ss_pred ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecC-CceeEEEecC--CCCcEEEEEeCCC
Q 018293 207 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD-KAVCTISYNP--LVPNLLATGSTDK 283 (358)
Q Consensus 207 ~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~i~~i~~~~--~~~~~l~~~~~dg 283 (358)
+...+.+++|+|.++..+++++.||.|++||++.. .....+..+. ..+.+++|+| ++ .+|++++.||
T Consensus 139 ~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg 208 (814)
T 3mkq_A 139 HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS---------TPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDL 208 (814)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS---------SCSEEEECCCTTCCCEEEECCSTTC-CEEEEECTTS
T ss_pred CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------cceeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCC
Confidence 88899999999955669999999999999999876 4555555544 8899999999 77 8999999999
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
.|++||+++++ ....+..|...|.+++|+|+++ ++++++.||.|++||+.+++.+....
T Consensus 209 ~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 209 TIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp EEEEEETTTTE--EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEee
Confidence 99999999887 5666778899999999999999 58999999999999999887665543
No 85
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.6e-35 Score=243.10 Aligned_cols=214 Identities=23% Similarity=0.357 Sum_probs=180.5
Q ss_pred ccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCC--CceeeeecccccceeeEEEcCC--CCcEEEEEeCCCcEEE
Q 018293 117 KKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAA--GKCNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVM 192 (358)
Q Consensus 117 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i 192 (358)
.+.+|...|.+++|+|+ +++|++|+.|++|++||+.. .+++..+.+|..+|.+++|+++ + .+|++++.|++|++
T Consensus 4 ~~~~h~~~V~~~~~s~~-g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYY-GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVMI 81 (297)
T ss_dssp ECCSCSSCEEEEEECTT-SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTTEEEE
T ss_pred eccCCcCceEEEEECCC-CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcC-CEEEEEcCCCEEEE
Confidence 45689999999999999 67999999999999999974 3678889999999999999864 5 89999999999999
Q ss_pred EEcccCC--CccceeeecCCeeeEEEcCCC-CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEec
Q 018293 193 KDARIST--HSGFKWAVAADVESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYN 269 (358)
Q Consensus 193 ~d~~~~~--~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 269 (358)
||+++++ .......|...|.+++|+|+. +.++++++.||.|++||++.... .....+.+|...|.+++|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~-------~~~~~~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT-------TSPIIIDAHAIGVNSASWA 154 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-------BCCEEEECCSSCEEEEEEC
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-------eeeeeeecccCccceEeec
Confidence 9998764 233344578899999999962 56899999999999999987521 2245678899999999999
Q ss_pred CCC------------CcEEEEEeCCCcEEEEecCCCCc--eeeEecCCCCceeEEEEEcCCC--CeEEEEEccCCeEEEE
Q 018293 270 PLV------------PNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSEDS--PFVLAIGGSKGKLEIW 333 (358)
Q Consensus 270 ~~~------------~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~vw 333 (358)
|++ +.+|++|+.|+.|++||+++++. .....+.+|...|.+++|+|++ ..+|++++.|++|++|
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 973 26999999999999999987652 2445678999999999999985 2369999999999999
Q ss_pred EccCCC
Q 018293 334 DTLSDA 339 (358)
Q Consensus 334 ~~~~~~ 339 (358)
|+.++.
T Consensus 235 d~~~~~ 240 (297)
T 2pm7_B 235 TQDNEQ 240 (297)
T ss_dssp EESSTT
T ss_pred EeCCCC
Confidence 998753
No 86
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=264.85 Aligned_cols=257 Identities=14% Similarity=0.138 Sum_probs=199.3
Q ss_pred CcccceeeecCCccccC-CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccE
Q 018293 47 AFPLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV 125 (358)
Q Consensus 47 ~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 125 (358)
..+.++.| +| ++++|++|+.||.|+|||+.+.+.... ......+ +|...|
T Consensus 64 ~~V~~~~~-------s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~---------------------~~~~~~~-~h~~~v 114 (437)
T 3gre_A 64 NSITSSAV-------SPGETPYLITGSDQGVIKIWNLKEIIVGEV---------------------YSSSLTY-DCSSTV 114 (437)
T ss_dssp SCEEEEEE-------ECSSSCEEEEEETTSEEEEEEHHHHHTTCC---------------------CSCSEEE-ECSSCE
T ss_pred CceEEEEE-------CCCCCCEEEEecCCceEEEeECcccccCcc---------------------cceeeec-cCCCCE
Confidence 34446655 88 999999999999999999976221110 0001111 489999
Q ss_pred EEEecCCCCCcEEEEEEcCCeEEEEECC---CCceeeeecc------------cccceeeEE--EcCCCCcEEEEEeCCC
Q 018293 126 LGLAWNKEFRNILASASADKQVKIWDVA---AGKCNLTLEH------------HTDKVQAVA--WNHHSPQILLSGSFDR 188 (358)
Q Consensus 126 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~~l~~~~~dg 188 (358)
.+++|+|+ +.+|++|+.||.|++||++ +++....+.. +...+.++. +++++ .++++++.|+
T Consensus 115 ~~~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~ 192 (437)
T 3gre_A 115 TQITMIPN-FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLS 192 (437)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTS
T ss_pred EEEEEeCC-CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCC
Confidence 99999998 6799999999999999994 5555444332 344555555 45667 8999999999
Q ss_pred cEEEEEcccCCCccceee--ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe-ecCCceeE
Q 018293 189 SVVMKDARISTHSGFKWA--VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCT 265 (358)
Q Consensus 189 ~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ 265 (358)
.|++||+++.+....... +...|.+++|+|+ +.++++|+.||.|++||++.+ ..+..+. .|..+|.+
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEE-CCVLILGTTRGIIDIWDIRFN---------VLIRSWSFGDHAPITH 262 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTT-SCEEEEEETTSCEEEEETTTT---------EEEEEEBCTTCEEEEE
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCC-CCEEEEEcCCCeEEEEEcCCc---------cEEEEEecCCCCceEE
Confidence 999999999887765655 7889999999995 669999999999999999986 6666665 77889999
Q ss_pred EEecC----CCCcEEEEEeCCCcEEEEecCCCCceeeEe----------------------cCC--CCceeEEEEEcCCC
Q 018293 266 ISYNP----LVPNLLATGSTDKMVKLWDLSNNQPSCIAS----------------------RNP--KAGAVFSVAFSEDS 317 (358)
Q Consensus 266 i~~~~----~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------------------~~~--~~~~v~~~~~~~~~ 317 (358)
++|+| ++ .+|++|+.||.|++||+++++...... +.+ |...|.+++|+ ++
T Consensus 263 ~~~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~ 340 (437)
T 3gre_A 263 VEVCQFYGKNS-VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND 340 (437)
T ss_dssp EEECTTTCTTE-EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT
T ss_pred EEeccccCCCc-cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc
Confidence 96655 45 799999999999999999876332222 112 67779999999 66
Q ss_pred CeEEEEEccCCeEEEEEccCCCcccccccc
Q 018293 318 PFVLAIGGSKGKLEIWDTLSDAGISNRFSK 347 (358)
Q Consensus 318 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 347 (358)
+ +|++|+.||.|++||+.+++.+.....+
T Consensus 341 ~-~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 341 K-ILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp E-EEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred e-EEEecCCCCeEEEEECCCcccceEEecc
Confidence 6 5899999999999999999887765543
No 87
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-36 Score=278.43 Aligned_cols=249 Identities=23% Similarity=0.341 Sum_probs=207.0
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCC-CcEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNIL 138 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l 138 (358)
+|+|++++|++|+.||.|+|||+... .......+.+|.+.|++++|+|+. +.+|
T Consensus 16 ~~s~dg~~latg~~dg~I~vwd~~~~-------------------------~~~~~~~l~~h~~~V~~l~~s~~~~~~~l 70 (753)
T 3jro_A 16 VLDYYGKRLATCSSDKTIKIFEVEGE-------------------------THKLIDTLTGHEGPVWRVDWAHPKFGTIL 70 (753)
T ss_dssp CCCSSSCCEEEEETTTEEEEEEEETT-------------------------EEEEEEEECCCSSCEEEEEECCTTSCSEE
T ss_pred EECCCCCeEEEEECCCcEEEEecCCC-------------------------CCccceeccCCcCceEEEEecCCCCCCEE
Confidence 34899999999999999999998631 123344566899999999998762 5699
Q ss_pred EEEEcCCeEEEEECCCCc--eeeeecccccceeeEEEcCC--CCcEEEEEeCCCcEEEEEcccCCCc--cceeeecCCee
Q 018293 139 ASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHS--GFKWAVAADVE 212 (358)
Q Consensus 139 ~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~i~ 212 (358)
++|+.||.|++||+.+++ .+..+..|...|.+++|+|+ + ..+++++.||.|++||++..... .....+...|.
T Consensus 71 ~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~ 149 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (753)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEE
T ss_pred EEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceE
Confidence 999999999999999886 67788889999999999999 7 89999999999999999887433 33456788999
Q ss_pred eEEEcCC------------CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC--CcEEEE
Q 018293 213 SLAWDPH------------AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV--PNLLAT 278 (358)
Q Consensus 213 ~~~~~~~------------~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~l~~ 278 (358)
+++|+|. ++..+++|+.||.|++||++..... ......+.+|...|++++|+|++ +.+|++
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~-----~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-----YVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE-----EEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc-----ceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 9999995 3668999999999999999876321 13455678899999999999993 389999
Q ss_pred EeCCCcEEEEecCCCCce---eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 279 GSTDKMVKLWDLSNNQPS---CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 279 ~~~dg~i~i~d~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
|+.||.|++||+++++.. .......|...|.+++|+|++++ +++|+.||.|++|++..+..
T Consensus 225 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~-l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp EESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC-EEEECSSSCEECCBCCSSSC
T ss_pred EecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCE-EEEEcCCCEEEEEecCCCCC
Confidence 999999999999986421 23334558889999999999995 88999999999999986543
No 88
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=245.98 Aligned_cols=250 Identities=15% Similarity=0.245 Sum_probs=209.6
Q ss_pred CcccceeeecCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEE
Q 018293 47 AFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL 126 (358)
Q Consensus 47 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 126 (358)
..+.++.| +|++++|++|+.||.|++||+.+++. ...+.+|...|.
T Consensus 33 ~~v~~~~~-------s~~~~~l~~~~~dg~i~vwd~~~~~~---------------------------~~~~~~h~~~v~ 78 (369)
T 3zwl_B 33 RPLTQVKY-------NKEGDLLFSCSKDSSASVWYSLNGER---------------------------LGTLDGHTGTIW 78 (369)
T ss_dssp SCEEEEEE-------CTTSCEEEEEESSSCEEEEETTTCCE---------------------------EEEECCCSSCEE
T ss_pred ceEEEEEE-------cCCCCEEEEEeCCCEEEEEeCCCchh---------------------------hhhhhhcCCcEE
Confidence 33446655 89999999999999999999975433 234557999999
Q ss_pred EEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCC-----CcEEEEEcccCCCc
Q 018293 127 GLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARISTHS 201 (358)
Q Consensus 127 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~ 201 (358)
+++|+|+ +++|++++.||.|++||+.+++.+..+. +...+.+++|+|++ .++++++.+ +.|.+||+......
T Consensus 79 ~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 79 SIDVDCF-TKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp EEEECTT-SSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred EEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccc
Confidence 9999998 6799999999999999999999988888 88899999999999 889999988 99999999876543
Q ss_pred cc-----------eeeecC--CeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEe
Q 018293 202 GF-----------KWAVAA--DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISY 268 (358)
Q Consensus 202 ~~-----------~~~~~~--~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 268 (358)
.. ...+.. .+.+++|+|+ +..+++++.||.|++||+++. ......+..|...|.+++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~v~~~~~ 226 (369)
T 3zwl_B 156 HELTKVSEEPIHKIITHEGLDAATVAGWSTK-GKYIIAGHKDGKISKYDVSNN--------YEYVDSIDLHEKSISDMQF 226 (369)
T ss_dssp CCEEEECSSCSEEEECCTTCCCEEEEEECGG-GCEEEEEETTSEEEEEETTTT--------TEEEEEEECCSSCEEEEEE
T ss_pred eeecccccceeeeccCCcCccceeEEEEcCC-CCEEEEEcCCCEEEEEECCCC--------cEeEEEEecCCCceeEEEE
Confidence 21 222333 8999999995 558999999999999999873 2677888889999999999
Q ss_pred cCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCC--------------eEEEEE
Q 018293 269 NPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG--------------KLEIWD 334 (358)
Q Consensus 269 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--------------~i~vw~ 334 (358)
+|++ .+|++++.|+.|++||+++++... .+. +...+.+++|+|++++ +++++.++ .+++||
T Consensus 227 ~~~~-~~l~~~~~d~~i~v~d~~~~~~~~--~~~-~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 227 SPDL-TYFITSSRDTNSFLVDVSTLQVLK--KYE-TDCPLNTAVITPLKEF-IILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp CTTS-SEEEEEETTSEEEEEETTTCCEEE--EEE-CSSCEEEEEECSSSSE-EEEEECCC-------------CEEEEEE
T ss_pred CCCC-CEEEEecCCceEEEEECCCCceee--eec-CCCCceeEEecCCCce-EEEeecCCCceEEEEecCCCcceeEEEe
Confidence 9998 899999999999999999987433 333 6678999999999995 77777777 899999
Q ss_pred ccCCCcccccccc
Q 018293 335 TLSDAGISNRFSK 347 (358)
Q Consensus 335 ~~~~~~~~~~~~~ 347 (358)
+.+++.+.....+
T Consensus 302 ~~~~~~~~~~~~~ 314 (369)
T 3zwl_B 302 KIFEEEIGRVQGH 314 (369)
T ss_dssp TTTCCEEEEEECC
T ss_pred cCCCcchhheecc
Confidence 9998877665444
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=252.08 Aligned_cols=251 Identities=17% Similarity=0.269 Sum_probs=199.5
Q ss_pred cCCcccceeeecCCccccCCCc-eEEecCC---CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCC
Q 018293 45 IPAFPLCMAWLDCPLKDREKGN-FMAVGSM---EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS 120 (358)
Q Consensus 45 ~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~---dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (358)
....+.++.| +|++. ++++|+. ||.|+|||+.+++.... ...+
T Consensus 17 h~~~v~~~~~-------~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~--------------------------~~~~ 63 (357)
T 3i2n_A 17 FNYTVFDCKW-------VPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLL--------------------------REIE 63 (357)
T ss_dssp CSSCEEEEEE-------CTTSSEEEEEEC--CCCEEEEEEEECSSSEEEE--------------------------EEEE
T ss_pred CCCceEEEEE-------cCCCceEEEecCccCCCcEEEEEeCCCCcccce--------------------------eeec
Confidence 4445556666 88885 5567766 99999999975442211 1125
Q ss_pred CcccEEEEecCCCC--CcEEEEEEcCCeEEEEECCCCc-eeeeecccccceeeEEE------cCCCCcEEEEEeCCCcEE
Q 018293 121 HTDSVLGLAWNKEF--RNILASASADKQVKIWDVAAGK-CNLTLEHHTDKVQAVAW------NHHSPQILLSGSFDRSVV 191 (358)
Q Consensus 121 h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~l~~~~~dg~i~ 191 (358)
|...|.+++|+|++ +.+|++|+.||.|++||+.+++ .+..+.+|...|.+++| +|++ .+|++++.||.|+
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVK 142 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEE
T ss_pred ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEE
Confidence 88999999999984 5799999999999999999988 88899999999999965 6777 8999999999999
Q ss_pred EEEcccCC-Cccceeeec----CCeeeEE----EcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCc
Q 018293 192 MKDARIST-HSGFKWAVA----ADVESLA----WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKA 262 (358)
Q Consensus 192 i~d~~~~~-~~~~~~~~~----~~i~~~~----~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (358)
+||+++.+ .......+. ..+.+++ |+| ++.++++++.||.|++||+++. .. .....|...
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~---------~~-~~~~~~~~~ 211 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNM---------AL-RWETNIKNG 211 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTT---------EE-EEEEECSSC
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccC---------ce-eeecCCCCc
Confidence 99999877 333333333 3788888 667 4569999999999999999876 33 445678899
Q ss_pred eeEEEecC---CCCcEEEEEeCCCcEEEEecCCCCceeeE---ecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEcc
Q 018293 263 VCTISYNP---LVPNLLATGSTDKMVKLWDLSNNQPSCIA---SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 263 i~~i~~~~---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
|.+++|+| ++ .+|++++.||.|++||+++++..... ....|...|.+++|+|+++.++++++.||.|++||+.
T Consensus 212 v~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 212 VCSLEFDRKDISM-NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp EEEEEESCSSSSC-CEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred eEEEEcCCCCCCC-CEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 99999999 77 89999999999999999886543222 2347899999999999998669999999999999998
Q ss_pred CCCcc
Q 018293 337 SDAGI 341 (358)
Q Consensus 337 ~~~~~ 341 (358)
++...
T Consensus 291 ~~~~~ 295 (357)
T 3i2n_A 291 YPIQR 295 (357)
T ss_dssp CCSCC
T ss_pred CCccc
Confidence 76543
No 90
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.9e-35 Score=249.96 Aligned_cols=243 Identities=13% Similarity=0.152 Sum_probs=200.9
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCc-EEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN-ILAS 140 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s 140 (358)
+|++++|++|+.||.|++|++.+..... ....+.+|...|.+++|+|+ +. +|++
T Consensus 20 s~~~~~l~~~~~d~~v~iw~~~~~~~~~------------------------~~~~~~~~~~~v~~~~~~~~-~~~~l~~ 74 (342)
T 1yfq_A 20 IPSKSLLLITSWDGSLTVYKFDIQAKNV------------------------DLLQSLRYKHPLLCCNFIDN-TDLQIYV 74 (342)
T ss_dssp EGGGTEEEEEETTSEEEEEEEETTTTEE------------------------EEEEEEECSSCEEEEEEEES-SSEEEEE
T ss_pred cCCCCEEEEEcCCCeEEEEEeCCCCccc------------------------cceeeeecCCceEEEEECCC-CCcEEEE
Confidence 8899999999999999999997543111 11123369999999999999 78 8999
Q ss_pred EEcCCeEEEEEC-CCCceeeeecc--cccceeeEEEcCCCCcEEEEEeCCCcEEEEEccc---------CCCccceeeec
Q 018293 141 ASADKQVKIWDV-AAGKCNLTLEH--HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI---------STHSGFKWAVA 208 (358)
Q Consensus 141 ~~~dg~v~iwd~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~ 208 (358)
|+.||.|++||+ .+++. ..+.+ |...|.+++|+| + ..+++++.|+.|++||+++ .+..... .+.
T Consensus 75 ~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 150 (342)
T 1yfq_A 75 GTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-KVK 150 (342)
T ss_dssp EETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-SSC
T ss_pred EcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCeeeEE-eeC
Confidence 999999999999 77754 67778 999999999999 6 8999999999999999987 6655433 378
Q ss_pred CCeeeEEEcCCCCCeEEEEecCCeEEEEEccc-CCCCCCCCCCCccEEEeecCCceeEEEecC-CCCcEEEEEeCCCcEE
Q 018293 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT-AKSDPDSTSQQSSFTLHAHDKAVCTISYNP-LVPNLLATGSTDKMVK 286 (358)
Q Consensus 209 ~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~~l~~~~~dg~i~ 286 (358)
..+.+++|+|++ +++++.|+.|++||++. ... ........|...+.+++|+| ++ .++++++.||.|+
T Consensus 151 ~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~-------~~~~~~~~~~~~i~~i~~~~~~~-~~l~~~~~dg~i~ 219 (342)
T 1yfq_A 151 NKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD-------NGTIEESGLKYQIRDVALLPKEQ-EGYACSSIDGRVA 219 (342)
T ss_dssp CCEEEEEECSSE---EEEEESTTEEEEEESSCCTTC-------CCEEEECSCSSCEEEEEECSGGG-CEEEEEETTSEEE
T ss_pred CceEEEEecCCc---EEEEeCCCeEEEEECCccccc-------cceeeecCCCCceeEEEECCCCC-CEEEEEecCCcEE
Confidence 899999999853 99999999999999987 421 23345566788999999999 88 8999999999999
Q ss_pred EEecCCC------CceeeEecCCCC---------ceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccccc
Q 018293 287 LWDLSNN------QPSCIASRNPKA---------GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 347 (358)
Q Consensus 287 i~d~~~~------~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 347 (358)
+|+++.. + ....+..|. ..|.+++|+|++++ |++++.||.|++||+.+++.+.....+
T Consensus 220 i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 220 VEFFDDQGDDYNSS--KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF-LYTAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp EEECCTTCCSTTCT--TCEEEECCCCCTTCCSSCCCEEEEEECTTTCC-EEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred EEEEcCCCcccccc--cceeeecccccccccccceeEEEEEEcCCCCE-EEEecCCceEEEEcCccHhHhhhhhcc
Confidence 9999876 4 344445554 49999999999995 889999999999999998877665443
No 91
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-36 Score=282.14 Aligned_cols=301 Identities=14% Similarity=0.157 Sum_probs=206.7
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
|+|+| +++|+++..++ .+.+|+...+.....+. .+..+.++ +|+|++++|++|+.||.|++|
T Consensus 64 l~fsp-g~~L~S~s~D~-----~v~lWd~~~~~~~~~~~-----~~~~V~~v-------~~sp~g~~l~sgs~dg~V~lw 125 (902)
T 2oaj_A 64 MRFVK-GIYLVVINAKD-----TVYVLSLYSQKVLTTVF-----VPGKITSI-------DTDASLDWMLIGLQNGSMIVY 125 (902)
T ss_dssp EEEET-TTEEEEEETTC-----EEEEEETTTCSEEEEEE-----CSSCEEEE-------ECCTTCSEEEEEETTSCEEEE
T ss_pred EEEcC-CCEEEEEECcC-----eEEEEECCCCcEEEEEc-----CCCCEEEE-------EECCCCCEEEEEcCCCcEEEE
Confidence 46899 78888887776 78888887652222222 22233344 448999999999999999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
|+.+.... ...+. ........+.+|...|.+++|+|++...+++|+.||.| +||+++++++..
T Consensus 126 d~~~~~~~-~~~i~---------------~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~ 188 (902)
T 2oaj_A 126 DIDRDQLS-SFKLD---------------NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQS 188 (902)
T ss_dssp ETTTTEEE-EEEEC---------------CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEE
T ss_pred ECCCCccc-cceec---------------cccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEE
Confidence 99765431 10000 00000023467999999999999756789999999999 999999988887
Q ss_pred eccc------------------ccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc--e-----e----------
Q 018293 161 LEHH------------------TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF--K-----W---------- 205 (358)
Q Consensus 161 ~~~~------------------~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~-----~---------- 205 (358)
+..| ...|.+++|+|++ .+|++++.||.|++||+++++.... . .
T Consensus 189 ~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~ 267 (902)
T 2oaj_A 189 FIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDS 267 (902)
T ss_dssp ECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCC
T ss_pred EecccCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCC
Confidence 7655 4779999999998 8999999999999999988764321 0 0
Q ss_pred -eecCCeeeEEEc----CCCCCeEEEEecC-----CeEEEEEc-------------------------------------
Q 018293 206 -AVAADVESLAWD----PHAEHSFVVSLED-----GTIKGFDI------------------------------------- 238 (358)
Q Consensus 206 -~~~~~i~~~~~~----~~~~~~~~~~~~d-----g~i~i~d~------------------------------------- 238 (358)
.+...|.+++|+ |++..++++|+.+ ..+.+|++
T Consensus 268 ~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~ 347 (902)
T 2oaj_A 268 STNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVN 347 (902)
T ss_dssp SSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEE
T ss_pred ccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEE
Confidence 123468888885 3333456666444 25666653
Q ss_pred ----------------------------------ccCCCCCCC---C-----C------------------------CCc
Q 018293 239 ----------------------------------RTAKSDPDS---T-----S------------------------QQS 252 (358)
Q Consensus 239 ----------------------------------~~~~~~~~~---~-----~------------------------~~~ 252 (358)
.++...... . . ...
T Consensus 348 ~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~ 427 (902)
T 2oaj_A 348 ILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNK 427 (902)
T ss_dssp EEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCC
T ss_pred EEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCC
Confidence 111000000 0 0 000
Q ss_pred cEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCcee--eEe--c-----CCCCceeEEEEEcCCCCeEEEE
Q 018293 253 SFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC--IAS--R-----NPKAGAVFSVAFSEDSPFVLAI 323 (358)
Q Consensus 253 ~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~--~-----~~~~~~v~~~~~~~~~~~~l~~ 323 (358)
...+.+|...+.+++|+|++ ++|++|+.|++|++||+.++.... ... + .+|...|.+++|+|+++ +||+
T Consensus 428 ~~~l~G~~~~v~sv~~spdg-~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~-~LAs 505 (902)
T 2oaj_A 428 DYLLKGGVRTKRQKLPAEYG-TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETL-ELAV 505 (902)
T ss_dssp CCSCCCSBCCCCCCCCCSEE-EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTT-EEEE
T ss_pred CCcccCCcCCCCcccccccC-cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCC-eEEE
Confidence 00112333444556677887 899999999999999998875311 111 1 27888999999999999 5999
Q ss_pred EccCCeEEEEEccCCC
Q 018293 324 GGSKGKLEIWDTLSDA 339 (358)
Q Consensus 324 ~~~dg~i~vw~~~~~~ 339 (358)
|+.||+|+||++.+++
T Consensus 506 gs~DgtV~lwd~~~~~ 521 (902)
T 2oaj_A 506 SIETGDVVLFKYEVNQ 521 (902)
T ss_dssp EETTSCEEEEEEEECC
T ss_pred EecCcEEEEEEecCcc
Confidence 9999999999998774
No 92
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.9e-35 Score=252.10 Aligned_cols=261 Identities=15% Similarity=0.204 Sum_probs=205.5
Q ss_pred CcccceeeecCCccccCC----CceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCc
Q 018293 47 AFPLCMAWLDCPLKDREK----GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT 122 (358)
Q Consensus 47 ~~~~~~~~~~~~~~~s~~----~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 122 (358)
..+.+++| +|+ ...+++++.++.|++||+.+++....... .....|.
T Consensus 19 ~~v~~i~~-------~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~----------------------~~~~~~~ 69 (366)
T 3k26_A 19 QPLFGVQF-------NWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS----------------------YVDADAD 69 (366)
T ss_dssp SCEEEEEE-------CTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEE----------------------EECSCTT
T ss_pred CceEEEEE-------ecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeee----------------------ccccCCC
Confidence 34456666 552 45566666678999999986654432211 1122477
Q ss_pred ccEEEEecCCCC---CcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcC-CCCcEEEEEeCCCcEEEEEcccC
Q 018293 123 DSVLGLAWNKEF---RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH-HSPQILLSGSFDRSVVMKDARIS 198 (358)
Q Consensus 123 ~~v~~~~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~ 198 (358)
..|++++|+|++ +.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++ .++++++.||.|++||++++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecC
Confidence 899999999984 35899999999999999999999999999999999999999 66 89999999999999999988
Q ss_pred CCccce---eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCC-------------------CCCCCccEEE
Q 018293 199 THSGFK---WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD-------------------STSQQSSFTL 256 (358)
Q Consensus 199 ~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~-------------------~~~~~~~~~~ 256 (358)
+..... ..+...|.+++|+|+ +.++++++.||.|++||+++.+.... ..........
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLL-GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTT-SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred eEEEEecccccccCceeEEEECCC-CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 766544 468889999999995 56899999999999999987521000 0000112233
Q ss_pred eecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc------------eeeEecCCCCceeEEEEEcCC--CCeEEE
Q 018293 257 HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP------------SCIASRNPKAGAVFSVAFSED--SPFVLA 322 (358)
Q Consensus 257 ~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------------~~~~~~~~~~~~v~~~~~~~~--~~~~l~ 322 (358)
..|...|.+++|+ + .+|++++.|+.|++||+++.+. ..+..+..|...|.+++|+|+ ++ +|+
T Consensus 228 ~~~~~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~ 303 (366)
T 3k26_A 228 DIHRNYVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLA 303 (366)
T ss_dssp SSCSSCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEE
T ss_pred cCCcceEEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEE
Confidence 3489999999999 4 7999999999999999988653 346667788889999999999 88 589
Q ss_pred EEccCCeEEEEEccCCCccc
Q 018293 323 IGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 323 ~~~~dg~i~vw~~~~~~~~~ 342 (358)
+|+.||.|++||+.+++...
T Consensus 304 ~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp EECTTSCEEEEECCSSSGGG
T ss_pred EEecCCcEEEEECCCCCCcc
Confidence 99999999999999987654
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.6e-35 Score=245.23 Aligned_cols=244 Identities=21% Similarity=0.279 Sum_probs=187.1
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCC--CceEeeceeecCCcccceeeecCCccccC--CCceEEecCCCCe
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGD--PNLYVHHHIIIPAFPLCMAWLDCPLKDRE--KGNFMAVGSMEPA 76 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~ 76 (358)
++|+|+++.|++|..++ .+.+|+...+.. ...+..| ...+.++.| ++ ++++|++|+.|++
T Consensus 19 v~~s~~g~~lasgs~D~-----~v~lwd~~~~~~~~~~~l~gH----~~~V~~v~~-------~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 19 AQMDYYGTRLATCSSDR-----SVKIFDVRNGGQILIADLRGH----EGPVWQVAW-------AHPMYGNILASCSYDRK 82 (316)
T ss_dssp EEECGGGCEEEEEETTT-----EEEEEEEETTEEEEEEEEECC----SSCEEEEEE-------CCGGGSSCEEEEETTSC
T ss_pred eeEcCCCCEEEEEeCCC-----eEEEEEecCCCcEEEEEEcCC----CccEEEEEe-------CCCCCCCEEEEEECCCE
Confidence 47899999999998776 677777654311 1111222 334456666 44 4899999999999
Q ss_pred EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCC-CcEEEEEEcCCeEEEEECCCC
Q 018293 77 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQVKIWDVAAG 155 (358)
Q Consensus 77 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~ 155 (358)
|++||+.++.. .....+.+|...|.+++|+|++ +.+|++|+.|++|++||++.+
T Consensus 83 v~iWd~~~~~~-------------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 83 VIIWREENGTW-------------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp EEEECCSSSCC-------------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred EEEEECCCCcc-------------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 99999875321 1122455799999999999973 568999999999999999876
Q ss_pred c---eeeeecccccceeeEEEcCCC----------------CcEEEEEeCCCcEEEEEcccCC---CccceeeecCCeee
Q 018293 156 K---CNLTLEHHTDKVQAVAWNHHS----------------PQILLSGSFDRSVVMKDARIST---HSGFKWAVAADVES 213 (358)
Q Consensus 156 ~---~~~~~~~~~~~v~~~~~~~~~----------------~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~i~~ 213 (358)
. ....+.+|...+.+++|+|+. ..+|++++.|+.|++||++... .......|...|.+
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~ 217 (316)
T 3bg1_A 138 GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD 217 (316)
T ss_dssp SCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEE
T ss_pred CCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEE
Confidence 3 245667899999999999973 2689999999999999997542 23334568889999
Q ss_pred EEEcCCC---CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEec
Q 018293 214 LAWDPHA---EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290 (358)
Q Consensus 214 ~~~~~~~---~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~ 290 (358)
++|+|++ ..+|++++.||.|++||++..... ......+..|...|.+++|+|++ .+|++++.|+.|++|+.
T Consensus 218 v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~-----~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 218 VAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN-----TWSPKLLHKFNDVVWHVSWSITA-NILAVSGGDNKVTLWKE 291 (316)
T ss_dssp EECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC-----CCBCCEEEECSSCEEEEEECTTT-CCEEEEESSSCEEEEEE
T ss_pred EEecCCCCCCCceEEEEcCCCeEEEEEccCcccc-----chhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEE
Confidence 9999975 368999999999999999863110 01233456788999999999998 89999999999999997
Q ss_pred C
Q 018293 291 S 291 (358)
Q Consensus 291 ~ 291 (358)
.
T Consensus 292 ~ 292 (316)
T 3bg1_A 292 S 292 (316)
T ss_dssp C
T ss_pred C
Confidence 5
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.9e-34 Score=252.84 Aligned_cols=233 Identities=19% Similarity=0.316 Sum_probs=199.4
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 142 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 142 (358)
+++++|++|+.||.|++||+.+++. ...+.+|.+.|.+++|+|+ + ++++|+
T Consensus 130 ~~~~~l~sgs~dg~i~vwd~~~~~~---------------------------~~~~~~h~~~V~~l~~~~~-~-~l~s~s 180 (464)
T 3v7d_B 130 FEDNYVITGADDKMIRVYDSINKKF---------------------------LLQLSGHDGGVWALKYAHG-G-ILVSGS 180 (464)
T ss_dssp EETTEEEEEETTSCEEEEETTTTEE---------------------------EEEECCCSSCEEEEEECST-T-EEEEEE
T ss_pred ECCCEEEEEcCCCcEEEEECCCCcE---------------------------EEEEeCCCcCEEEEEEcCC-C-EEEEEe
Confidence 4678999999999999999975432 2345689999999999998 4 899999
Q ss_pred cCCeEEEEECCCCceeeeecccccceeeEEEcC--CCCcEEEEEeCCCcEEEEEcccCCCcc------------------
Q 018293 143 ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH--HSPQILLSGSFDRSVVMKDARISTHSG------------------ 202 (358)
Q Consensus 143 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~------------------ 202 (358)
.||+|++||+++++++..+.+|...|.+++|++ ++ .++++++.||.|++||+++.....
T Consensus 181 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (464)
T 3v7d_B 181 TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEEN 259 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGC
T ss_pred CCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCC
Confidence 999999999999999999999999999999984 55 889999999999999998765332
Q ss_pred -----ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEE
Q 018293 203 -----FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 277 (358)
Q Consensus 203 -----~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~ 277 (358)
....+...+.++. + ++.++++++.||.|++||+++. ..+..+.+|...|.+++|+|++ .+++
T Consensus 260 ~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~l~ 326 (464)
T 3v7d_B 260 PYFVGVLRGHMASVRTVS--G-HGNIVVSGSYDNTLIVWDVAQM---------KCLYILSGHTDRIYSTIYDHER-KRCI 326 (464)
T ss_dssp TTEEEEECCCSSCEEEEE--E-ETTEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEEETTT-TEEE
T ss_pred eEEEEEccCccceEEEEc--C-CCCEEEEEeCCCeEEEEECCCC---------cEEEEecCCCCCEEEEEEcCCC-CEEE
Confidence 1234555666664 4 3458999999999999999987 7788889999999999999998 8999
Q ss_pred EEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 278 TGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 278 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
+|+.||.|++||+++++ .+..+.+|...|.+++|++ . .+++++.||.|++||+.+++....
T Consensus 327 sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 327 SASMDTTIRIWDLENGE--LMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp EEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEeCCCcEEEEECCCCc--EEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECCCCceeee
Confidence 99999999999999887 5777889999999999984 4 589999999999999998765443
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-34 Score=248.96 Aligned_cols=239 Identities=11% Similarity=0.077 Sum_probs=188.7
Q ss_pred ccccCCCceE-EecCCCCeEEEEEcc--cccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCC
Q 018293 59 LKDREKGNFM-AVGSMEPAIEIWDLD--VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 135 (358)
Q Consensus 59 ~~~s~~~~~l-~~g~~dg~i~vw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 135 (358)
++|+|++++| ++|+.||.|+|||+. +++...... ...|...|++++|+|+ +
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~-------------------------~~~~~~~v~~~~~sp~-~ 161 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK-------------------------RFCFSKRPNAISIAED-D 161 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE-------------------------EEECSSCEEEEEECTT-S
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee-------------------------cccCCCCceEEEEcCC-C
Confidence 4459999996 899999999999997 443332111 1246789999999999 6
Q ss_pred cEEEEEEcCCeEEEEECCCCceee----eecccccceeeEEEcCC---CCcEEEEEeCCCcEEEEEcccCCCccc-eeee
Q 018293 136 NILASASADKQVKIWDVAAGKCNL----TLEHHTDKVQAVAWNHH---SPQILLSGSFDRSVVMKDARISTHSGF-KWAV 207 (358)
Q Consensus 136 ~~l~s~~~dg~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~ 207 (358)
.+|++|+.||.|++|++.+++... .+.+|...|.+++|+|+ + .+|++++.|+.|++||+++++.... ...|
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGH-QFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSC-EEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCC-cEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 799999999999999998877554 77889999999999999 7 8999999999999999998876654 4468
Q ss_pred cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe-------------------------ecCCc
Q 018293 208 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-------------------------AHDKA 262 (358)
Q Consensus 208 ~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~ 262 (358)
...|.+++|+ + +.++++++.|+.|++||++++ +.+..+. .....
T Consensus 241 ~~~v~~~~~s-d-~~~l~s~~~d~~v~vwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (450)
T 2vdu_B 241 KHFVSSICCG-K-DYLLLSAGGDDKIFAWDWKTG---------KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFA 309 (450)
T ss_dssp SSCEEEEEEC-S-TTEEEEEESSSEEEEEETTTC---------CEEEEEECHHHHGGGCCTTSBC----------CBCCC
T ss_pred CCceEEEEEC-C-CCEEEEEeCCCeEEEEECCCC---------cEeeeecchhhhhhhhhhcccccccccccccccceEE
Confidence 8999999999 4 569999999999999999987 4444443 22456
Q ss_pred eeEEEecCCCCcEEEEEe-CCCcEEEEec--CCC-CceeeEecCCCCceeEEEEEcCCCCeEEEEEcc------CCeEEE
Q 018293 263 VCTISYNPLVPNLLATGS-TDKMVKLWDL--SNN-QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS------KGKLEI 332 (358)
Q Consensus 263 i~~i~~~~~~~~~l~~~~-~dg~i~i~d~--~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~v 332 (358)
+.+++|+|++ .+|++++ .|+.|++|++ ..+ ....+..+..| ..|.+++|+|++. ++++++. +..|.+
T Consensus 310 v~~i~~~~~~-~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~-~v~~~~~~~~~~~~~~i~v 386 (450)
T 2vdu_B 310 VSKIIKSKNL-PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEF-QVTLDNKESSGVQKNFAKF 386 (450)
T ss_dssp EEEEEECSSS-SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEE-EEEECCTTCCSSCCCSEEE
T ss_pred EEEEEEeCCC-CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcE-EEEEecccCCCCCCcceEE
Confidence 8999999988 7888888 8999999999 443 22345556666 7899999999643 3443332 456888
Q ss_pred EEccCC
Q 018293 333 WDTLSD 338 (358)
Q Consensus 333 w~~~~~ 338 (358)
|.+...
T Consensus 387 ~~~~~~ 392 (450)
T 2vdu_B 387 IEYNLN 392 (450)
T ss_dssp EEEETT
T ss_pred EEEEcC
Confidence 887643
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-34 Score=247.13 Aligned_cols=234 Identities=23% Similarity=0.386 Sum_probs=197.5
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 143 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 143 (358)
+++.+++++.||.|++||+.+++.... ....|...|.+++|+|+ +.+|++|+.
T Consensus 102 s~~~l~~~~~d~~v~lw~~~~~~~~~~--------------------------~~~~~~~~v~~v~~s~~-~~~l~~~~~ 154 (401)
T 4aez_A 102 SNLNVVAVALERNVYVWNADSGSVSAL--------------------------AETDESTYVASVKWSHD-GSFLSVGLG 154 (401)
T ss_dssp CTTSEEEEEETTEEEEEETTTCCEEEE--------------------------EECCTTCCEEEEEECTT-SSEEEEEET
T ss_pred cCCCEEEEECCCeEEEeeCCCCcEeEe--------------------------eecCCCCCEEEEEECCC-CCEEEEECC
Confidence 456688888999999999986543321 11238899999999998 679999999
Q ss_pred CCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC-CCccceeeecCCeeeEEEcCCCCC
Q 018293 144 DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWAVAADVESLAWDPHAEH 222 (358)
Q Consensus 144 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~ 222 (358)
||.|++||+.+++.+..+.+|...|.+++|+ + .++++++.||.|++||++.. ........+...|.+++|+|+ +.
T Consensus 155 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 230 (401)
T 4aez_A 155 NGLVDIYDVESQTKLRTMAGHQARVGCLSWN--R-HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD-GL 230 (401)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SS
T ss_pred CCeEEEEECcCCeEEEEecCCCCceEEEEEC--C-CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC-CC
Confidence 9999999999999999999999999999994 3 68999999999999999954 444455678899999999994 56
Q ss_pred eEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe--CCCcEEEEecCCCCceeeEe
Q 018293 223 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--TDKMVKLWDLSNNQPSCIAS 300 (358)
Q Consensus 223 ~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~ 300 (358)
++++++.||.|++||+++. .....+..|...|.+++|+|++..++++++ .|+.|++||+++++. ...
T Consensus 231 ~l~s~~~d~~v~iwd~~~~---------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--~~~ 299 (401)
T 4aez_A 231 QLASGGNDNVVQIWDARSS---------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--VNT 299 (401)
T ss_dssp EEEEEETTSCEEEEETTCS---------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE--EEE
T ss_pred EEEEEeCCCeEEEccCCCC---------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE--EEE
Confidence 9999999999999999986 777888899999999999998878888876 799999999999874 333
Q ss_pred cCCCCceeEEEEEcCCCCeEEEE--EccCCeEEEEEccCCCcc
Q 018293 301 RNPKAGAVFSVAFSEDSPFVLAI--GGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 301 ~~~~~~~v~~~~~~~~~~~~l~~--~~~dg~i~vw~~~~~~~~ 341 (358)
+. +...|.+++|+|++++ +++ |+.||.|++||+.+++..
T Consensus 300 ~~-~~~~v~~~~~s~~~~~-l~~~~g~~dg~i~v~~~~~~~~~ 340 (401)
T 4aez_A 300 VD-AGSQVTSLIWSPHSKE-IMSTHGFPDNNLSIWSYSSSGLT 340 (401)
T ss_dssp EE-CSSCEEEEEECSSSSE-EEEEECTTTCEEEEEEEETTEEE
T ss_pred Ee-CCCcEEEEEECCCCCe-EEEEeecCCCcEEEEecCCccce
Confidence 33 5578999999999996 555 458999999999886544
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.1e-34 Score=245.28 Aligned_cols=290 Identities=15% Similarity=0.248 Sum_probs=196.0
Q ss_pred CcccC-CCcEEEEEEecCCCceEEEEEEeccCCCCCceEeece---------eecCCcccceeeecCCccccC-CCceEE
Q 018293 1 MTINP-NDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHH---------IIIPAFPLCMAWLDCPLKDRE-KGNFMA 69 (358)
Q Consensus 1 l~~~p-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~s~-~~~~l~ 69 (358)
++|+| +++.|+++..++ .+.+|+.........+.... ......+.++.| +| ++++|+
T Consensus 49 ~~~s~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~l~ 116 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDG-----VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQW-------YPHDTGMFT 116 (408)
T ss_dssp EEECTTTCCEEEEEETTS-----CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEE-------CTTCTTCEE
T ss_pred EEEecCCCCEEEEEcCCC-----eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEE-------ccCCCcEEE
Confidence 47899 999999998776 67777776654333332111 012334446655 77 788999
Q ss_pred ecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCC--CcEEEEEEcCCeE
Q 018293 70 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF--RNILASASADKQV 147 (358)
Q Consensus 70 ~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~v 147 (358)
+++.||.|++||+.+++.... + .+...+.++.|+|.+ +.++++++.||.|
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~---------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADV---------------------------F-NFEETVYSHHMSPVSTKHCLVAVGTRGPKV 168 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEE---------------------------E-ECSSCEEEEEECSSCSSCCEEEEEESSSSE
T ss_pred EEeCCCeEEEeeCCCCcccee---------------------------c-cCCCceeeeEeecCCCCCcEEEEEcCCCeE
Confidence 999999999999976443221 1 266788999998852 3499999999999
Q ss_pred EEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc----------------eeeecCCe
Q 018293 148 KIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF----------------KWAVAADV 211 (358)
Q Consensus 148 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----------------~~~~~~~i 211 (358)
++||+++++.+..+..|...|.+++|+|++..++++++.||.|++||++....... ...+...|
T Consensus 169 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 169 QLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV 248 (408)
T ss_dssp EEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred EEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCce
Confidence 99999999999999999999999999999955799999999999999987652211 13577889
Q ss_pred eeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCC--------------------------------------CCCCcc
Q 018293 212 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS--------------------------------------TSQQSS 253 (358)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~--------------------------------------~~~~~~ 253 (358)
.+++|+|+ +.++++++.||.|++||+++....... .....+
T Consensus 249 ~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 249 NGLCFTSD-GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred eEEEEcCC-CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 99999995 568999999999999999876532110 122456
Q ss_pred EEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEE
Q 018293 254 FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333 (358)
Q Consensus 254 ~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw 333 (358)
..+.+|...|++++|+|++ .+|++++.||.|++||+++.++.. ..... -....+.+.....+.+.+.++.+++|
T Consensus 328 ~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~W 401 (408)
T 4a11_B 328 TMLKGHYKTVDCCVFQSNF-QELYSGSRDCNILAWVPSLYEPVP--DDDET---TTKSQLNPAFEDAWSSSDEEGGTSAW 401 (408)
T ss_dssp EEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEEEECC-----------------------------------------
T ss_pred eeeccCCCeEEEEEEcCCC-CEEEEECCCCeEEEEeCCCCCccC--CCCce---EeccccccccceeecccCccCceeec
Confidence 6678899999999999998 899999999999999999887432 22211 12233444443357778889999999
Q ss_pred EccC
Q 018293 334 DTLS 337 (358)
Q Consensus 334 ~~~~ 337 (358)
+...
T Consensus 402 ~~~~ 405 (408)
T 4a11_B 402 SHPQ 405 (408)
T ss_dssp ----
T ss_pred CCcc
Confidence 8753
No 98
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.1e-35 Score=287.08 Aligned_cols=281 Identities=16% Similarity=0.193 Sum_probs=229.0
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~ 81 (358)
+++|+++.+++|..++ .+++|+...+........| ...+.++.| +|+|++|++++.||.|++||
T Consensus 968 ~~sp~g~~l~~g~~~g-----~i~i~d~~~~~~~~~~~~h----~~~v~~l~~-------s~dg~~l~s~~~dg~i~vwd 1031 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDEDG-----AIKIIELPNNRVFSSGVGH----KKAVRHIQF-------TADGKTLISSSEDSVIQVWN 1031 (1249)
T ss_dssp EECTTSSEEEEEETTS-----CCEEEETTTTSCEEECCCC----SSCCCCEEE-------CSSSSCEEEECSSSBEEEEE
T ss_pred EEcCCCCEEEEEcCCC-----CEEEEEcCCCceeeecccC----CCceEEEEE-------CCCCCEEEEEcCCCEEEEEE
Confidence 6899999999998877 7788888765332222223 223345544 89999999999999999999
Q ss_pred cccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeee
Q 018293 82 LDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL 161 (358)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 161 (358)
+.+++.. ...+|...|.+++|+|+ + .+++++.||.|++||+.+++....+
T Consensus 1032 ~~~~~~~----------------------------~~~~~~~~v~~~~~~~~-~-~l~~~~~dg~v~vwd~~~~~~~~~~ 1081 (1249)
T 3sfz_A 1032 WQTGDYV----------------------------FLQAHQETVKDFRLLQD-S-RLLSWSFDGTVKVWNVITGRIERDF 1081 (1249)
T ss_dssp TTTTEEE----------------------------CCBCCSSCEEEEEECSS-S-EEEEEESSSEEEEEETTTTCCCEEE
T ss_pred CCCCceE----------------------------EEecCCCcEEEEEEcCC-C-cEEEEECCCcEEEEECCCCceeEEE
Confidence 9764332 23368999999999997 4 6889999999999999999999999
Q ss_pred cccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccC
Q 018293 162 EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241 (358)
Q Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~ 241 (358)
.+|...|.+++|+|++ .++++++.||.|++||+.+++.......|...|++++|+|+ +.++++++.||.|++||+.++
T Consensus 1082 ~~~~~~v~~~~~s~d~-~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~d-g~~lat~~~dg~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1082 TCHQGTVLSCAISSDA-TKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLD-GILLATGDDNGEIRIWNVSDG 1159 (1249)
T ss_dssp ECCSSCCCCEEECSSS-SSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSS-SSEEEEEETTSCCCEEESSSS
T ss_pred cccCCcEEEEEECCCC-CEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCC-CCEEEEEeCCCEEEEEECCCC
Confidence 9999999999999999 88999999999999999998888777789999999999995 559999999999999999987
Q ss_pred CCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEE
Q 018293 242 KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVL 321 (358)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 321 (358)
+................|...|++++|+|++ .+|++++ |.|++||+.+++ .+..+..|...|.+++|+|++++ +
T Consensus 1160 ~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg-~~l~s~~--g~v~vwd~~~g~--~~~~~~~~~~~i~~~~~s~dg~~-l 1233 (1249)
T 3sfz_A 1160 QLLHSCAPISVEEGTATHGGWVTDVCFSPDS-KTLVSAG--GYLKWWNVATGD--SSQTFYTNGTNLKKIHVSPDFRT-Y 1233 (1249)
T ss_dssp CCCCCCCCCC-------CCSCCCEEEECTTS-SCEEEES--SSEEEBCSSSCB--CCCCCCCSSCCCCCCEECSSSCC-E
T ss_pred ceEEEeccccccccccccCceEEEEEECCCC-CEEEECC--CeEEEEECCCCc--eeeeeeccCCcccEEEECCCCCE-E
Confidence 5433221112223346788999999999998 7888775 899999999987 45567778889999999999995 8
Q ss_pred EEEccCCeEEEEEcc
Q 018293 322 AIGGSKGKLEIWDTL 336 (358)
Q Consensus 322 ~~~~~dg~i~vw~~~ 336 (358)
++++.||.|++|++.
T Consensus 1234 ~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1234 VTVDNLGILYILQVL 1248 (1249)
T ss_dssp EEECTTCCEEEECCC
T ss_pred EEecCCcEEEEEeec
Confidence 889999999999974
No 99
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.7e-34 Score=243.61 Aligned_cols=281 Identities=16% Similarity=0.272 Sum_probs=212.4
Q ss_pred CcccCC---CcEEEEEEecCCCceEEEEEEeccCCCC-C-ceEeeceeecCCcccceeeecCCccccCCCceEEecCCCC
Q 018293 1 MTINPN---DAVIVCARNEDDVSHLEVYILEESDGGD-P-NLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 75 (358)
Q Consensus 1 l~~~p~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg 75 (358)
++|+|+ ++.|+++..++ .+.+|+...... . ..+..| ...+.++.| +|++++|++|+.||
T Consensus 45 ~~~~~~~~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 45 LSFSPPTLPGNFLIAGSWAN-----DVRCWEVQDSGQTIPKAQQMH----TGPVLDVCW-------SDDGSKVFTASCDK 108 (368)
T ss_dssp EEECCTTSSSEEEEEEETTS-----EEEEEEECTTSCEEEEEEEEC----SSCEEEEEE-------CTTSSEEEEEETTS
T ss_pred EEEcCCCCCceEEEEECCCC-----cEEEEEcCCCCceeEEEeccc----cCCEEEEEE-------CcCCCEEEEEcCCC
Confidence 468999 59999997776 677777765211 1 122222 334446655 89999999999999
Q ss_pred eEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEec--CCCCCcEEEEEEcCCeEEEEECC
Q 018293 76 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAW--NKEFRNILASASADKQVKIWDVA 153 (358)
Q Consensus 76 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~dg~v~iwd~~ 153 (358)
.|++||+.+.+... +.+|...|.+++| +|+ +.+|++++.||.|++||++
T Consensus 109 ~v~iwd~~~~~~~~----------------------------~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQ----------------------------IAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp EEEEEETTTTEEEE----------------------------EEECSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSS
T ss_pred cEEEEEcCCCCcee----------------------------eccccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECC
Confidence 99999997543221 2359999999999 888 6799999999999999999
Q ss_pred CCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce--eeecCCeeeEEEcCCCC---CeEEEEe
Q 018293 154 AGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--WAVAADVESLAWDPHAE---HSFVVSL 228 (358)
Q Consensus 154 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~---~~~~~~~ 228 (358)
+++++..+..+. .+.++.+.+ ..+++++.++.+.+|+++........ ........++.+.++.. ..+++++
T Consensus 160 ~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (368)
T 3mmy_A 160 SSNPMMVLQLPE-RCYCADVIY---PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235 (368)
T ss_dssp CSSCSEEEECSS-CEEEEEEET---TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE
T ss_pred CCcEEEEEecCC-CceEEEecC---CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec
Confidence 999988888654 566777765 46888999999999999876433211 12334455666554322 2399999
Q ss_pred cCCeEEEEEcccCCCCCCCCCCCccEEEeecCC------------ceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce
Q 018293 229 EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK------------AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296 (358)
Q Consensus 229 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~------------~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 296 (358)
.||.|++||++.... ......+..|.. .|++++|+|++ .+|++++.||.|++||+++++
T Consensus 236 ~dg~i~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~~~~~-- 306 (368)
T 3mmy_A 236 IEGRVAIHYINPPNP------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDKDART-- 306 (368)
T ss_dssp TTSEEEEEESSCSCH------HHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEETTTTE--
T ss_pred CCCcEEEEecCCCCc------cccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEECCCCc--
Confidence 999999999987521 134556666655 79999999998 899999999999999999887
Q ss_pred eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 297 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
.+..+..|..+|.+++|+|++++ |++++.|+..+.|++.+.+.
T Consensus 307 ~~~~~~~~~~~v~~~~~s~~g~~-l~~~s~d~~~~~~~~~~~~~ 349 (368)
T 3mmy_A 307 KLKTSEQLDQPISACCFNHNGNI-FAYASSYDWSKGHEFYNPQK 349 (368)
T ss_dssp EEEECCCCSSCEEEEEECTTSSC-EEEEECCCSTTCGGGCCTTS
T ss_pred EEEEecCCCCCceEEEECCCCCe-EEEEecccccccccccCCCc
Confidence 56778899999999999999995 88888888666666544433
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.1e-34 Score=260.52 Aligned_cols=246 Identities=15% Similarity=0.195 Sum_probs=208.1
Q ss_pred ccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCccc-EEEEecCC--CCC
Q 018293 59 LKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS-VLGLAWNK--EFR 135 (358)
Q Consensus 59 ~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~--~~~ 135 (358)
++|+|++++|++++ ++.|++||+.++... ......+.+|... |++++|+| + +
T Consensus 24 ~~~spdg~~l~~~~-~~~v~v~~~~~~~~~-----------------------~~~~~~~~~h~~~~v~~~~~sp~~~-~ 78 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-GKSAFVRCLDDGDSK-----------------------VPPVVQFTGHGSSVVTTVKFSPIKG-S 78 (615)
T ss_dssp CEEETTTTEEEEEE-TTEEEEEECCSSCCS-----------------------SCSEEEECTTTTSCEEEEEECSSTT-C
T ss_pred EEECCCCCEEEEec-CCeEEEEECCCCCCc-----------------------cccceEEecCCCceEEEEEECcCCC-C
Confidence 34499999999998 889999999754110 0223356689999 99999999 8 6
Q ss_pred cEEEEEEcCCeEEEEECCCC--------ceeeeecccccceeeEEEcCCCCcEEEEEeCC----CcEEEEEcccCCCccc
Q 018293 136 NILASASADKQVKIWDVAAG--------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD----RSVVMKDARISTHSGF 203 (358)
Q Consensus 136 ~~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~ 203 (358)
.+|++|+.||.|++||+.++ +....+..|...|.+++|+|++ .++++++.+ +.|.+|| .++....
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~~~~v~~~d--~~~~~~~ 155 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWD--SGNSLGE 155 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETT--TCCEEEE
T ss_pred CEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCC-CEEEEeccCCCCccEEEEEE--CCCccee
Confidence 79999999999999999754 6777888899999999999999 888898887 7888888 3444444
Q ss_pred eeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCC---ceeEEEecCC-CCcEEEEE
Q 018293 204 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK---AVCTISYNPL-VPNLLATG 279 (358)
Q Consensus 204 ~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~---~i~~i~~~~~-~~~~l~~~ 279 (358)
...+...|.+++|+|++..++++++.|+.|++||+.+. +....+..|.. .|.+++|+|+ + .+|+++
T Consensus 156 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~ 225 (615)
T 1pgu_A 156 VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF---------KFSASDRTHHKQGSFVRDVEFSPDSG-EFVITV 225 (615)
T ss_dssp CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB---------EEEEEECSSSCTTCCEEEEEECSTTC-CEEEEE
T ss_pred eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc---------ceeeeecccCCCCceEEEEEECCCCC-CEEEEE
Confidence 56788899999999977668999999999999999876 77788888998 9999999999 7 899999
Q ss_pred eCCCcEEEEecCCCCceeeEec-C---CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccc
Q 018293 280 STDKMVKLWDLSNNQPSCIASR-N---PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 280 ~~dg~i~i~d~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
+.||.|++||+++++ .+..+ . .|...|.+++|+ +++ .+++++.||.|++||+.+++.+.....
T Consensus 226 ~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 226 GSDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp ETTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eCCCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 999999999999887 45555 4 789999999999 888 588999999999999998887655433
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-34 Score=239.17 Aligned_cols=235 Identities=16% Similarity=0.160 Sum_probs=197.7
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 142 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 142 (358)
+++++|++|+.||.|++||+.+.... ..+..|...|.+++|+|+ +.+|++++
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~---------------------------~~~~~~~~~v~~~~~~~~-~~~l~~~~ 78 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLG---------------------------TVVYTGQGFLNSVCYDSE-KELLLFGG 78 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEE---------------------------EEEEECSSCEEEEEEETT-TTEEEEEE
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEE---------------------------EEeecCCccEEEEEECCC-CCEEEEec
Confidence 68999999999999999999653322 234468999999999999 67999999
Q ss_pred cCCeEEEEECCCC---ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCC
Q 018293 143 ADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPH 219 (358)
Q Consensus 143 ~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 219 (358)
.||.|++|++... +.+..+..|...|.++.| ++ .++++++.||.|++|| ..+.......+...+.++.|.|.
T Consensus 79 ~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 153 (313)
T 3odt_A 79 KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QD-GVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF 153 (313)
T ss_dssp TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET
T ss_pred CCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cC-CEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC
Confidence 9999999998754 567778889999999999 34 6899999999999999 44444445668889999999986
Q ss_pred CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee-cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceee
Q 018293 220 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298 (358)
Q Consensus 220 ~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 298 (358)
++..+++++.||.|++||.. .....+.. |...+.+++|+|++ . +++++.||.|++||+++++ .+
T Consensus 154 ~~~~l~~~~~d~~i~i~d~~-----------~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~dg~i~i~d~~~~~--~~ 218 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQND-----------KVIKTFSGIHNDVVRHLAVVDDG-H-FISCSNDGLIKLVDMHTGD--VL 218 (313)
T ss_dssp TTTEEEEEETTSCEEEEETT-----------EEEEEECSSCSSCEEEEEEEETT-E-EEEEETTSEEEEEETTTCC--EE
T ss_pred CCCEEEEEECCCCEEEEecC-----------ceEEEEeccCcccEEEEEEcCCC-e-EEEccCCCeEEEEECCchh--hh
Confidence 67799999999999999943 45556666 88999999999987 5 8999999999999999887 56
Q ss_pred EecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccccc
Q 018293 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 347 (358)
Q Consensus 299 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 347 (358)
..+..|...|.+++|+|++. +++++.||.|++||+.+++.+.....+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 219 RTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp EEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred hhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECCCCceeEEEecc
Confidence 66778999999999999994 778999999999999998877655443
No 102
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.7e-34 Score=249.11 Aligned_cols=266 Identities=24% Similarity=0.358 Sum_probs=215.6
Q ss_pred CCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEEcccc
Q 018293 6 NDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVI 85 (358)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~ 85 (358)
+++.++++..++ .+.+|+...+.....+..| ...+.++.| +++++++|+.||.|++||+.++
T Consensus 168 ~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~h----~~~v~~~~~---------~~~~l~s~s~dg~i~~wd~~~~ 229 (445)
T 2ovr_B 168 RDNIIISGSTDR-----TLKVWNAETGECIHTLYGH----TSTVRCMHL---------HEKRVVSGSRDATLRVWDIETG 229 (445)
T ss_dssp ETTEEEEEETTS-----CEEEEETTTTEEEEEECCC----SSCEEEEEE---------ETTEEEEEETTSEEEEEESSSC
T ss_pred cCCEEEEEeCCC-----eEEEEECCcCcEEEEECCC----CCcEEEEEe---------cCCEEEEEeCCCEEEEEECCCC
Confidence 367888887776 7888887765222222222 233345544 4678999999999999999754
Q ss_pred cCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccc
Q 018293 86 DEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHT 165 (358)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 165 (358)
+.. ..+.+|...|.+++| + +.++++|+.||.|++||+++++++..+.+|.
T Consensus 230 ~~~---------------------------~~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 279 (445)
T 2ovr_B 230 QCL---------------------------HVLMGHVAAVRCVQY--D-GRRVVSGAYDFMVKVWDPETETCLHTLQGHT 279 (445)
T ss_dssp CEE---------------------------EEEECCSSCEEEEEE--C-SSCEEEEETTSCEEEEEGGGTEEEEEECCCS
T ss_pred cEE---------------------------EEEcCCcccEEEEEE--C-CCEEEEEcCCCEEEEEECCCCcEeEEecCCC
Confidence 332 244579999999999 3 5589999999999999999999999999999
Q ss_pred cceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCC
Q 018293 166 DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDP 245 (358)
Q Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 245 (358)
..|.++.| ++ ..+++++.||.|++||+++++.......+...+.++.+++ +++++++.||.|++||++++
T Consensus 280 ~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~---- 349 (445)
T 2ovr_B 280 NRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTG---- 349 (445)
T ss_dssp SCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTC----
T ss_pred CceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCC----
Confidence 99999999 55 7899999999999999999887776667888888888854 48999999999999999887
Q ss_pred CCCCCCccEEEee---cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEe---cCCCCceeEEEEEcCCCCe
Q 018293 246 DSTSQQSSFTLHA---HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS---RNPKAGAVFSVAFSEDSPF 319 (358)
Q Consensus 246 ~~~~~~~~~~~~~---~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~ 319 (358)
..+..+.. |...|.+++|++ .+|++|+.||.|++||+.+++...... ...|.+.|.+++|+|++.
T Consensus 350 -----~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~- 420 (445)
T 2ovr_B 350 -----QCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL- 420 (445)
T ss_dssp -----CEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE-
T ss_pred -----cEEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEE-
Confidence 66777765 888999999974 799999999999999999988433321 146788999999999998
Q ss_pred EEEEEccCCe----EEEEEccCC
Q 018293 320 VLAIGGSKGK----LEIWDTLSD 338 (358)
Q Consensus 320 ~l~~~~~dg~----i~vw~~~~~ 338 (358)
++++|+.||. |.+||+...
T Consensus 421 ~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 421 VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEcccCCCCccEEEEEECCCC
Confidence 5899999997 999999754
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.5e-33 Score=246.16 Aligned_cols=225 Identities=27% Similarity=0.482 Sum_probs=197.2
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 141 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 141 (358)
++++++|++|+.||.|++||+.+++. ...+.+|...|.+++| + +.+|++|
T Consensus 140 ~~d~~~l~~g~~dg~i~iwd~~~~~~---------------------------~~~~~~h~~~v~~l~~--~-~~~l~sg 189 (435)
T 1p22_A 140 QYDDQKIVSGLRDNTIKIWDKNTLEC---------------------------KRILTGHTGSVLCLQY--D-ERVIITG 189 (435)
T ss_dssp ECCSSEEEEEESSSCEEEEESSSCCE---------------------------EEEECCCSSCEEEEEC--C-SSEEEEE
T ss_pred EECCCEEEEEeCCCeEEEEeCCCCeE---------------------------EEEEcCCCCcEEEEEE--C-CCEEEEE
Confidence 45899999999999999999975433 2345679999999999 4 5699999
Q ss_pred EcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc---cceeeecCCeeeEEEcC
Q 018293 142 SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS---GFKWAVAADVESLAWDP 218 (358)
Q Consensus 142 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~ 218 (358)
+.||.|++||+.+++.+..+.+|...|.+++|++ ..+++++.||.|++||+++.... .....+...|.+++|.
T Consensus 190 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~- 265 (435)
T 1p22_A 190 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD- 265 (435)
T ss_dssp ETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE-
T ss_pred cCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC-
Confidence 9999999999999999999999999999999974 58999999999999999987765 3445678899999993
Q ss_pred CCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceee
Q 018293 219 HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 298 (358)
Q Consensus 219 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 298 (358)
+.++++|+.||.|++||++++ ..+..+..|...|.++.++ + .++++|+.||.|++||+++++ .+
T Consensus 266 --~~~l~s~~~dg~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~~--~~ 329 (435)
T 1p22_A 266 --DKYIVSASGDRTIKVWNTSTC---------EFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGA--CL 329 (435)
T ss_dssp --TTEEEEEETTSEEEEEETTTC---------CEEEEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTCC--EE
T ss_pred --CCEEEEEeCCCeEEEEECCcC---------cEEEEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCCC--EE
Confidence 458999999999999999987 7788899999999999995 3 799999999999999999987 56
Q ss_pred EecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 299 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
..+.+|...|.+++| ++. .+++|+.||.|++||+.+++
T Consensus 330 ~~~~~h~~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 330 RVLEGHEELVRCIRF--DNK-RIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEEHHHHT
T ss_pred EEEeCCcCcEEEEEe--cCC-EEEEEeCCCcEEEEECCCCC
Confidence 778889999999999 566 58999999999999998765
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.1e-33 Score=244.63 Aligned_cols=257 Identities=21% Similarity=0.361 Sum_probs=197.6
Q ss_pred CcccCC-CcEEEEEEecCCCceEEEEEEeccC----------CCCCceEeeceeecCCcccceeeecCCccccCCCc-eE
Q 018293 1 MTINPN-DAVIVCARNEDDVSHLEVYILEESD----------GGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGN-FM 68 (358)
Q Consensus 1 l~~~p~-~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l 68 (358)
++++|+ +++|+++..++ .|++|+... ......+..| ...+.++.| +|++. +|
T Consensus 134 l~~~p~~~~~lat~~~dg-----~V~vwd~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~-------~~~~~~~l 197 (430)
T 2xyi_A 134 ARYMPQNACVIATKTPSS-----DVLVFDYTKHPSKPEPSGECQPDLRLRGH----QKEGYGLSW-------NPNLNGYL 197 (430)
T ss_dssp EEEETTEEEEEEEECSSS-----CEEEEEGGGSCSSCCTTCCCCCSEEEECC----SSCCCCEEE-------CTTSTTEE
T ss_pred EEECCCCCcEEEEECCCC-----cEEEEECCCcccccCccccCCCcEEecCC----CCCeEEEEe-------CCCCCCeE
Confidence 468897 56777776665 677777654 1111222222 233446666 78888 99
Q ss_pred EecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEE
Q 018293 69 AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVK 148 (358)
Q Consensus 69 ~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 148 (358)
++|+.||.|++|++.+..... ........+.+|...|.+++|+|+++.+|++++.||.|+
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~--------------------~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~ 257 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEH--------------------RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM 257 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGG--------------------GEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEeCCCeEEEEeCCCCCCCC--------------------ceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence 999999999999997532211 111223345679999999999996688999999999999
Q ss_pred EEECCCC---ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCC-CccceeeecCCeeeEEEcCCCCCeE
Q 018293 149 IWDVAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHSF 224 (358)
Q Consensus 149 iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~ 224 (358)
+||++++ +.+..+..|...|++++|+|++..++++++.||.|++||++... .......|...|.+++|+|++..++
T Consensus 258 i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 258 IWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp EEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEE
T ss_pred EEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEE
Confidence 9999987 56777888999999999999996689999999999999999844 4454556889999999999887889
Q ss_pred EEEecCCeEEEEEcccCCCCCC-----CCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCC
Q 018293 225 VVSLEDGTIKGFDIRTAKSDPD-----STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293 (358)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~ 293 (358)
++++.||.|++||+........ ......+....+|...|++++|+|+++.+|++++.||.|++|++...
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9999999999999987421110 00014566777889999999999998449999999999999998753
No 105
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=239.12 Aligned_cols=235 Identities=6% Similarity=0.024 Sum_probs=181.3
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
.+.+++++|++|+.||.|++||+.+++..... ....|.++.|+|. ++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~-----------------------------~~~~v~~~~~~~~----~~ 89 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTI-----------------------------TTPNPRTGGEHPA----II 89 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEE-----------------------------EEECCCTTCCCCS----EE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEE-----------------------------ecCCceeeeeCCc----eE
Confidence 34578999999999999999999865543321 1456788888886 89
Q ss_pred EEEcCCeEEEEECC---------CCceeeeec-ccccceeeEEEcC--CCCcEEEEEeCCCcEEEEEcccCCCccce-ee
Q 018293 140 SASADKQVKIWDVA---------AGKCNLTLE-HHTDKVQAVAWNH--HSPQILLSGSFDRSVVMKDARISTHSGFK-WA 206 (358)
Q Consensus 140 s~~~dg~v~iwd~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~ 206 (358)
+++.|++|++|+.. +++.+..+. .|..+|.+++|+| ++ .++++++.||.|++||+++++..... ..
T Consensus 90 s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~~~ 168 (343)
T 3lrv_A 90 SRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHSAK 168 (343)
T ss_dssp EECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEECCC
T ss_pred EecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEecC
Confidence 99999999999765 444444443 5668899999999 88 89999999999999999988764433 23
Q ss_pred ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCcc-EEEee-cCCceeEEEecCCCCcEEEEEeCCCc
Q 018293 207 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS-FTLHA-HDKAVCTISYNPLVPNLLATGSTDKM 284 (358)
Q Consensus 207 ~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~ 284 (358)
+...+.+++|+|+ +.++++|+.||.|++||++++ ... ..+.. |..+|++++|+|++ .+|++++ |+.
T Consensus 169 ~~~~i~~~~~~pd-g~~lasg~~dg~i~iwd~~~~---------~~~~~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~ 236 (343)
T 3lrv_A 169 SDVEYSSGVLHKD-SLLLALYSPDGILDVYNLSSP---------DQASSRFPVDEEAKIKEVKFADNG-YWMVVEC-DQT 236 (343)
T ss_dssp SSCCCCEEEECTT-SCEEEEECTTSCEEEEESSCT---------TSCCEECCCCTTSCEEEEEECTTS-SEEEEEE-SSB
T ss_pred CCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCC---------CCCccEEeccCCCCEEEEEEeCCC-CEEEEEe-CCe
Confidence 4557999999995 569999999999999999987 444 66777 99999999999998 8999999 559
Q ss_pred EEEEecCCCCcee-eEecCCCCcee--EEEEEcCCCCeEEEEEcc-CCeEEEEEccCCCcc
Q 018293 285 VKLWDLSNNQPSC-IASRNPKAGAV--FSVAFSEDSPFVLAIGGS-KGKLEIWDTLSDAGI 341 (358)
Q Consensus 285 i~i~d~~~~~~~~-~~~~~~~~~~v--~~~~~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~ 341 (358)
|++||+++.+... +..+..|...+ .+++|+|++++ |++++. |+.|++|++.+....
T Consensus 237 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~s~~d~~i~v~~~~~~~~~ 296 (343)
T 3lrv_A 237 VVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN-MIAYSNESNSLTIYKFDKKTKN 296 (343)
T ss_dssp EEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE-EEEEETTTTEEEEEEECTTTCS
T ss_pred EEEEEcCCCCcceeecccccccccccceEEEECCCCCE-EEEecCCCCcEEEEEEcccccc
Confidence 9999999876422 11112233334 36999999996 777776 999999999765543
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-33 Score=234.24 Aligned_cols=279 Identities=8% Similarity=0.023 Sum_probs=198.2
Q ss_pred ccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEEc
Q 018293 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDL 82 (358)
Q Consensus 3 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~ 82 (358)
+.++++++++|..++ .+++|+...+.....+. ...+. ++.|+|+ +++|+.|+.|++|+.
T Consensus 44 ~~~d~~~l~sg~~Dg-----~v~iwd~~~~~~~~~~~------~~~v~-------~~~~~~~---~~s~s~D~~i~~w~~ 102 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDG-----ALHFTQLKDSKTITTIT------TPNPR-------TGGEHPA---IISRGPCNRLLLLYP 102 (343)
T ss_dssp SSEEEEEEEEEEETT-----EEEEEEESSSSCEEEEE------EECCC-------TTCCCCS---EEEECSTTEEEEEET
T ss_pred hcCCCCEEEEECCCC-----cEEEEECCCCcEEEEEe------cCCce-------eeeeCCc---eEEecCCCeEEEEEc
Confidence 456788999998887 88888887653222221 11122 3344666 999999999999988
Q ss_pred ccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCC--CCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 83 DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK--EFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
........ . ...........+|...|.+++|+| + +.++++|+.||+|++||+++++....
T Consensus 103 ~~~~~~~~--~---------------~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~ 164 (343)
T 3lrv_A 103 GNQITILD--S---------------KTNKVLREIEVDSANEIIYMYGHNEVN-TEYFIWADNRGTIGFQSYEDDSQYIV 164 (343)
T ss_dssp TTEEEEEE--T---------------TTCCEEEEEECCCSSCEEEEECCC----CCEEEEEETTCCEEEEESSSSCEEEE
T ss_pred cCceEEee--c---------------CCcceeEEeecCCCCCEEEEEcCCCCC-CCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 63211000 0 000101112235778999999999 8 67999999999999999999988766
Q ss_pred ec-ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc-cceee-ecCCeeeEEEcCCCCCeEEEEecCCeEEEEE
Q 018293 161 LE-HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWA-VAADVESLAWDPHAEHSFVVSLEDGTIKGFD 237 (358)
Q Consensus 161 ~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d 237 (358)
.. .+...+.+++|+|++ .++++|+.||.|++||+++++.. ..... |...|.+++|+|+ +.++++++ ++.|++||
T Consensus 165 ~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~-g~~l~s~~-~~~v~iwd 241 (343)
T 3lrv_A 165 HSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN-GYWMVVEC-DQTVVCFD 241 (343)
T ss_dssp ECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTT-SSEEEEEE-SSBEEEEE
T ss_pred EecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCC-CCEEEEEe-CCeEEEEE
Confidence 63 455689999999999 89999999999999999998876 43444 7899999999995 55888888 55999999
Q ss_pred cccCCCCCCCCCCCccEEEeecCCce--eEEEecCCCCcEEEEEeC-CCcEEEEecCCCCceeeEecCCCCceeEEEEEc
Q 018293 238 IRTAKSDPDSTSQQSSFTLHAHDKAV--CTISYNPLVPNLLATGST-DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFS 314 (358)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i--~~i~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~ 314 (358)
+++..... .+..+..|...+ .+++|+|++ .+|++++. |+.+++|++...... ... .++..++|.
T Consensus 242 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~~~~~--~~~----~~~~~~~~~ 308 (343)
T 3lrv_A 242 LRKDVGTL------AYPTYTIPEFKTGTVTYDIDDSG-KNMIAYSNESNSLTIYKFDKKTKN--WTK----DEESALCLQ 308 (343)
T ss_dssp TTSSTTCB------SSCCCBC-----CCEEEEECTTS-SEEEEEETTTTEEEEEEECTTTCS--EEE----EEEEECCC-
T ss_pred cCCCCcce------eecccccccccccceEEEECCCC-CEEEEecCCCCcEEEEEEcccccc--eEe----cCceeEecC
Confidence 99873211 111122233333 469999998 89999888 999999999766522 221 567888898
Q ss_pred C---CCCeEEEEEccCCeEEEEEccC
Q 018293 315 E---DSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 315 ~---~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
+ +... +++++.||.+.++-...
T Consensus 309 ~~~~~~~~-l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 309 SDTADFTD-MDVVCGDGGIAAILKTN 333 (343)
T ss_dssp ---CCCCE-EEEEEETTEEEEEEECS
T ss_pred ccccccce-eEEEecCCceEEEEecC
Confidence 8 7774 77888999998876443
No 107
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.5e-32 Score=237.21 Aligned_cols=249 Identities=22% Similarity=0.365 Sum_probs=203.6
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
.||++ ++||+|. |++|+|||..+++.... ..+.+|...|++++|+|+ +.+|+
T Consensus 112 ~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~-------------------------~~~~~~~~~V~sv~fspd-g~~la 163 (420)
T 4gga_A 112 DWSSG-NVLAVAL-DNSVYLWSASSGDILQL-------------------------LQMEQPGEYISSVAWIKE-GNYLA 163 (420)
T ss_dssp EECTT-SEEEEEE-TTEEEEEETTTCCEEEE-------------------------EECCSTTCCEEEEEECTT-SSEEE
T ss_pred EECCC-CEEEEEe-CCEEEEEECCCCCEEEE-------------------------EEecCCCCcEEEEEECCC-CCEEE
Confidence 34654 5888875 99999999987654332 234468899999999999 67999
Q ss_pred EEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc-cceeeecCCeeeEEEcC
Q 018293 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAVAADVESLAWDP 218 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~ 218 (358)
+|+.||+|++||+++++++..+.+|...+.++.+++ .++++++.|+.+++||.+..... .....|...+..+.|+|
T Consensus 164 sgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~ 240 (420)
T 4gga_A 164 VGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 240 (420)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred EEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC
Confidence 999999999999999999999999999999988864 68999999999999999876543 34556888999999999
Q ss_pred CCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEE--eCCCcEEEEecCCCCce
Q 018293 219 HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPS 296 (358)
Q Consensus 219 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~ 296 (358)
+ +.++++++.|+.+++||...++... ..+.....|...|.+++|+|.+..+++++ +.|+.|++||+.+++.
T Consensus 241 ~-g~~l~s~~~D~~v~i~~~~~~~~~~-----~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~- 313 (420)
T 4gga_A 241 D-GRHLASGGNDNLVNVWPSAPGEGGW-----VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC- 313 (420)
T ss_dssp T-SSEEEEEETTSCEEEEESSCCSSCS-----CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE-
T ss_pred C-CCeeeeeeccccceEEeeccccccc-----eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc-
Confidence 5 5699999999999999998764322 45677788999999999999887888765 4799999999999873
Q ss_pred eeEecCCCCceeEEEEEcCCCCeEEEEE-ccCCeEEEEEccCCCccccccccC
Q 018293 297 CIASRNPKAGAVFSVAFSEDSPFVLAIG-GSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 297 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
...+.. ...+.++.|+|+++.+++++ +.||.|+|||+.+++.+..+-+|.
T Consensus 314 -~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~ 364 (420)
T 4gga_A 314 -LSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT 364 (420)
T ss_dssp -EEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred -ceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCC
Confidence 444443 35688999999999755443 379999999999999887766554
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-33 Score=243.05 Aligned_cols=208 Identities=15% Similarity=0.095 Sum_probs=171.9
Q ss_pred cCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECC--CCceeeeec--ccccceeeEEEcCCCCcEEEEEeCCCcEEEE
Q 018293 118 KGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMK 193 (358)
Q Consensus 118 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 193 (358)
..+|...|.+++|+|++..++++|+.||.|++||+. +++.+..+. .|...|.+++|+|++ .+|++++.+|.+++|
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSI 176 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEE
Confidence 346778999999999954335899999999999999 888888776 567889999999999 899999999999999
Q ss_pred EcccCCCcc----ceeeecCCeeeEEEcCC--CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEE-EeecCCceeEE
Q 018293 194 DARISTHSG----FKWAVAADVESLAWDPH--AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT-LHAHDKAVCTI 266 (358)
Q Consensus 194 d~~~~~~~~----~~~~~~~~i~~~~~~~~--~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~~~~~i~~i 266 (358)
++.+..... ....|...|.+++|+|+ ++.++++++.|+.|++||++++ ..+.. +.+|...|.++
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~---------~~~~~~~~~h~~~v~~~ 247 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC---------FIVDKWLFGHKHFVSSI 247 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT---------TCEEEECCCCSSCEEEE
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC---------ceeeeeecCCCCceEEE
Confidence 998876543 56678899999999996 2568999999999999999876 55555 55899999999
Q ss_pred EecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC-----------------------CCCceeEEEEEcCCCCeEEEE
Q 018293 267 SYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN-----------------------PKAGAVFSVAFSEDSPFVLAI 323 (358)
Q Consensus 267 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~~l~~ 323 (358)
+|+ ++ .+|++++.|+.|++||+++++........ .....|.+++|+|++++ +++
T Consensus 248 ~~s-d~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~~ 324 (450)
T 2vdu_B 248 CCG-KD-YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF-VAF 324 (450)
T ss_dssp EEC-ST-TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE-EEE
T ss_pred EEC-CC-CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE-EEE
Confidence 999 77 89999999999999999998743333211 22356899999999996 555
Q ss_pred Ec-cCCeEEEEEc--cCC
Q 018293 324 GG-SKGKLEIWDT--LSD 338 (358)
Q Consensus 324 ~~-~dg~i~vw~~--~~~ 338 (358)
++ .|+.|++|++ .++
T Consensus 325 ~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 325 FVEATKCIIILEMSEKQK 342 (450)
T ss_dssp EETTCSEEEEEEECSSST
T ss_pred EECCCCeEEEEEeccCCC
Confidence 55 8999999999 544
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.6e-33 Score=234.21 Aligned_cols=264 Identities=14% Similarity=0.237 Sum_probs=197.9
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccC--CCceEEecCCCCeEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE--KGNFMAVGSMEPAIE 78 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~i~ 78 (358)
++|+|+++.|+++..++ .+.+|+...+.........-......+.++.| +| ++++|++|+.||.|+
T Consensus 17 ~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSDQ-----HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDW-------ASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EEECSSSSEEEEEETTS-----EEEEEEECSSSCCEEEEEEEECCSSCEEEEEE-------CCGGGCSEEEEEETTSCEE
T ss_pred EEEcCCCCEEEEeeCCC-----eEEEEECCCCCCcceecceeccCCCcEEEEEE-------cCCCCCCEEEEEcCCCeEE
Confidence 47899999999998776 77777766532221121111123444557766 66 699999999999999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCC-CcEEEEEEcCCeEEEEECCCCce
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQVKIWDVAAGKC 157 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~ 157 (358)
+||+.+++.... .........+.+|...|.+++|+|+. +.+|++++.||.|++||+++++.
T Consensus 85 vwd~~~~~~~~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 146 (351)
T 3f3f_A 85 LWEEDPDQEECS------------------GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSD 146 (351)
T ss_dssp EEEECTTSCTTS------------------SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTC
T ss_pred EEecCCCccccc------------------ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHH
Confidence 999986543210 01223445566899999999999983 45899999999999999998876
Q ss_pred eeeec-------------ccccceeeEEEcCC--CCcEEEEEeCCCcEEEEEcccCCC--ccceeeecCCeeeEEEcCCC
Q 018293 158 NLTLE-------------HHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTH--SGFKWAVAADVESLAWDPHA 220 (358)
Q Consensus 158 ~~~~~-------------~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~ 220 (358)
+..+. .|...+.+++|+|+ .+..+++++.++.+.+|+...... ......|...|.+++|+|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~ 226 (351)
T 3f3f_A 147 LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSI 226 (351)
T ss_dssp TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCS
T ss_pred hccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCC
Confidence 55443 57789999999997 238999999999998888776654 33344678899999999975
Q ss_pred C---CeEEEEecCCeEEEEEcccCCCCCC-------------------------------------CCCCCccEEEeecC
Q 018293 221 E---HSFVVSLEDGTIKGFDIRTAKSDPD-------------------------------------STSQQSSFTLHAHD 260 (358)
Q Consensus 221 ~---~~~~~~~~dg~i~i~d~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~ 260 (358)
. .++++++.||.|++||++....... ......+..+.+|.
T Consensus 227 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 306 (351)
T 3f3f_A 227 GRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN 306 (351)
T ss_dssp SCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTS
T ss_pred CCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccc
Confidence 3 6899999999999999987521110 00114455677899
Q ss_pred CceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc
Q 018293 261 KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295 (358)
Q Consensus 261 ~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 295 (358)
..|++++|+|++ .+|++++.||.|++||+.+++.
T Consensus 307 ~~v~~~~~s~~~-~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 307 GEVWSVSWNLTG-TILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp SCEEEEEECSSS-CCEEEEETTSCEEEEEECTTSC
T ss_pred ccEEEEEEcCCC-CEEEEecCCCcEEEEecCcCcc
Confidence 999999999998 8999999999999999998753
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.4e-32 Score=230.85 Aligned_cols=275 Identities=11% Similarity=0.121 Sum_probs=198.6
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceE-EecCCCCeEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM-AVGSMEPAIEI 79 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~i~v 79 (358)
++|+|++++|++|.. + .+.+|+.... ....... .. ....+.+ .++++++ ++|+.|+.|++
T Consensus 25 v~fs~dg~~la~g~~-~-----~~~iw~~~~~---~~~~~~~--~~-~~~~~~~-------~~~~~~~~~~~~~d~~v~i 85 (355)
T 3vu4_A 25 YEFNQDQSCLILSTL-K-----SFEIYNVHPV---AHIMSQE--MR-HLSKVRM-------LHRTNYVAFVTGVKEVVHI 85 (355)
T ss_dssp EEECTTSSEEEEECS-S-----EEEEEEETTE---EEEEEEE--CS-CCCEEEE-------CTTSSEEEEECSSTTEEEE
T ss_pred EEECCCCCEEEEEcC-C-----EEEEEecCCc---ceeeeee--cC-CeEEEEE-------cCCCCEEEEEECCccEEEE
Confidence 479999999998843 3 3456776543 1111111 11 1223333 5566666 67888899999
Q ss_pred EEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC-cee
Q 018293 80 WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG-KCN 158 (358)
Q Consensus 80 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~ 158 (358)
||..+++... .+ .|...|.+++|+++ .++++ .|+.|++||+.++ +.+
T Consensus 86 Wd~~~~~~~~---------------------------~~-~~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~~~~ 133 (355)
T 3vu4_A 86 WDDVKKQDVS---------------------------RI-KVDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPWKRI 133 (355)
T ss_dssp EETTTTEEEE---------------------------EE-ECSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTCCBS
T ss_pred EECCCCcEEE---------------------------EE-ECCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCceee
Confidence 9997654332 12 25678999999987 34444 4789999999988 777
Q ss_pred eeecccccceeeEEEcCCCCcEEEE--EeCCCcEEEEEcccCC----------------CccceeeecCCeeeEEEcCCC
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLS--GSFDRSVVMKDARIST----------------HSGFKWAVAADVESLAWDPHA 220 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~----------------~~~~~~~~~~~i~~~~~~~~~ 220 (358)
..+.. +...+++++ .++++ ++.||.|++||++++. .......|...|.+++|+|+
T Consensus 134 ~~~~~---~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~- 206 (355)
T 3vu4_A 134 TDDIR---FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK- 206 (355)
T ss_dssp SCCEE---EEEEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-
T ss_pred EEecc---CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-
Confidence 77664 444566666 34444 6889999999998765 14445678999999999995
Q ss_pred CCeEEEEecCCe-EEEEEcccCCCCCCCCCCCccEEEe-e-cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCcee
Q 018293 221 EHSFVVSLEDGT-IKGFDIRTAKSDPDSTSQQSSFTLH-A-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC 297 (358)
Q Consensus 221 ~~~~~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 297 (358)
+.++++++.||+ |++||++++ ..+..+. + |...|.+++|+|++ .+|++++.|+.|++||++......
T Consensus 207 g~~l~s~s~d~~~v~iwd~~~~---------~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~~~~ 276 (355)
T 3vu4_A 207 SDMVATCSQDGTIIRVFKTEDG---------VLVREFRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQDNK 276 (355)
T ss_dssp SSEEEEEETTCSEEEEEETTTC---------CEEEEEECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEEESSCCSCCC
T ss_pred CCEEEEEeCCCCEEEEEECCCC---------cEEEEEEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEEEccCCCCcc
Confidence 569999999998 999999987 6777787 4 99999999999998 899999999999999998654221
Q ss_pred eEecC---------------------CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 298 IASRN---------------------PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 298 ~~~~~---------------------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
...+. ........++|++++++ +++++.||.+++|++..++...+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~-l~~~~~dg~~~~~~~~~~~~~~~~ 343 (355)
T 3vu4_A 277 RHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL-VVVWPHTRMIETFKVVFDDEMERW 343 (355)
T ss_dssp SEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE-EEEETTTTEEEEEEEEEETTTTEE
T ss_pred cccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE-EEEEeCCCeEEEEEEEcCCCCceE
Confidence 11111 11223466899999994 888999999999999877655443
No 111
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=3e-32 Score=234.62 Aligned_cols=278 Identities=13% Similarity=0.115 Sum_probs=207.0
Q ss_pred cEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceE-EecCCCCeEEEEEccccc
Q 018293 8 AVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM-AVGSMEPAIEIWDLDVID 86 (358)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~i~vw~~~~~~ 86 (358)
.+++++..++ .+++|+...+.....+.++ ..+.++.| +|+++++ ++++.|+.|++||+.+++
T Consensus 3 ~l~vs~~~d~-----~v~v~d~~~~~~~~~~~~~-----~~~~~~~~-------s~dg~~l~~~~~~d~~i~v~d~~~~~ 65 (391)
T 1l0q_A 3 FAYIANSESD-----NISVIDVTSNKVTATIPVG-----SNPMGAVI-------SPDGTKVYVANAHSNDVSIIDTATNN 65 (391)
T ss_dssp EEEEEETTTT-----EEEEEETTTTEEEEEEECS-----SSEEEEEE-------CTTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred EEEEEcCCCC-----EEEEEECCCCeEEEEeecC-----CCcceEEE-------CCCCCEEEEECCCCCeEEEEECCCCe
Confidence 4555565555 7888888765222222222 22345544 8999876 677799999999997654
Q ss_pred CcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeeccccc
Q 018293 87 EVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTD 166 (358)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 166 (358)
.... +. +...+.+++|+|++..++++++.++.|++||+.+++.+..+..+ .
T Consensus 66 ~~~~---------------------------~~-~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~ 116 (391)
T 1l0q_A 66 VIAT---------------------------VP-AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-K 116 (391)
T ss_dssp EEEE---------------------------EE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-S
T ss_pred EEEE---------------------------EE-CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-C
Confidence 3321 11 22389999999995544456667899999999999988887754 5
Q ss_pred ceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCC
Q 018293 167 KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD 246 (358)
Q Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~ 246 (358)
.+.+++|+|++..++++++.++.|++||+.+++... .......+.+++|+|++..+++++..++.|++||+++.
T Consensus 117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~----- 190 (391)
T 1l0q_A 117 SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN-TVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN----- 190 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-----
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE-EEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-----
Confidence 689999999994444788889999999998876654 33345667999999977655578888999999999876
Q ss_pred CCCCCccEEEeecCCceeEEEecCCCCcEEEEEe---CCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEE
Q 018293 247 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS---TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAI 323 (358)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 323 (358)
.....+. +...+.+++|+|++ .+|++++ .++.|++||+.+++. +..+..+. .+.+++|+|++++++++
T Consensus 191 ----~~~~~~~-~~~~~~~~~~~~~g-~~l~~~~~~~~~~~v~~~d~~~~~~--~~~~~~~~-~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 191 ----SVIDTVK-VEAAPSGIAVNPEG-TKAYVTNVDKYFNTVSMIDTGTNKI--TARIPVGP-DPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp ----EEEEEEE-CSSEEEEEEECTTS-SEEEEEEECSSCCEEEEEETTTTEE--EEEEECCS-SEEEEEECTTSSEEEEE
T ss_pred ----eEEEEEe-cCCCccceEECCCC-CEEEEEecCcCCCcEEEEECCCCeE--EEEEecCC-CccEEEEccCCCEEEEE
Confidence 4444443 56678999999998 6777666 689999999998874 44444443 47899999999977788
Q ss_pred EccCCeEEEEEccCCCccccccc
Q 018293 324 GGSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 324 ~~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
++.|+.|++||+.+++.+.....
T Consensus 262 ~~~d~~v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 262 LSFXNTVSVIDTATNTITATMAV 284 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEEC
T ss_pred cCCCCEEEEEECCCCcEEEEEEC
Confidence 89999999999999887655433
No 112
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-33 Score=238.36 Aligned_cols=213 Identities=24% Similarity=0.367 Sum_probs=184.7
Q ss_pred cccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECC--CCceeeeecccccceeeEEEcCC--CCcEEEEEeCCCcEE
Q 018293 116 YKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVV 191 (358)
Q Consensus 116 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~ 191 (358)
..+.+|...|++++|+|+ +.+|++|+.||.|++||+. +++.+..+.+|...|++++|+++ + .+|++++.||.|+
T Consensus 5 ~~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVL 82 (379)
T ss_dssp CCEEECCCCEEEEEECSS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEE
T ss_pred EEecCCcccEEEEEEcCC-CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEE
Confidence 456689999999999999 6799999999999999998 56777888999999999999877 6 8999999999999
Q ss_pred EEEcccCC--CccceeeecCCeeeEEEcCCC-CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEe
Q 018293 192 MKDARIST--HSGFKWAVAADVESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISY 268 (358)
Q Consensus 192 i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 268 (358)
+||+++++ .......+...+.+++|+|+. +.++++++.||.|++||++.... .....+..|...|.+++|
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-------~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-------TSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-------CCEEEEECCTTCEEEEEE
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-------eeeEEecCCCCceEEEEE
Confidence 99999876 444455678899999999963 56999999999999999987632 345567789999999999
Q ss_pred cC-------------CCCcEEEEEeCCCcEEEEecCCCCce--eeEecCCCCceeEEEEEcCC---CCeEEEEEccCCeE
Q 018293 269 NP-------------LVPNLLATGSTDKMVKLWDLSNNQPS--CIASRNPKAGAVFSVAFSED---SPFVLAIGGSKGKL 330 (358)
Q Consensus 269 ~~-------------~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~dg~i 330 (358)
+| ++ .+|++++.||.|++||+++.... ....+..|...|.+++|+|+ +. +|++++.||.|
T Consensus 156 ~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~dg~i 233 (379)
T 3jrp_A 156 APATIEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTC 233 (379)
T ss_dssp CCCC----------CTT-CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEETTSCE
T ss_pred cCccccccccccCCCCC-CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeCCCEE
Confidence 99 45 89999999999999999876532 44567889999999999999 67 69999999999
Q ss_pred EEEEccCCC
Q 018293 331 EIWDTLSDA 339 (358)
Q Consensus 331 ~vw~~~~~~ 339 (358)
++||+.+++
T Consensus 234 ~iwd~~~~~ 242 (379)
T 3jrp_A 234 IIWTQDNEQ 242 (379)
T ss_dssp EEEEESSTT
T ss_pred EEEeCCCCC
Confidence 999999864
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-33 Score=260.74 Aligned_cols=233 Identities=16% Similarity=0.181 Sum_probs=188.4
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+|+|++++||+|+.||.|+||+....+.. ....|...|.+++|+| +. +|+
T Consensus 24 afspdg~~lAsgs~Dg~I~lw~~~~~~~~----------------------------~~~~~~~~V~~l~fsp-g~-~L~ 73 (902)
T 2oaj_A 24 AFDFTQNLLAIATVTGEVHIYGQQQVEVV----------------------------IKLEDRSAIKEMRFVK-GI-YLV 73 (902)
T ss_dssp EEETTTTEEEEEETTSEEEEECSTTCEEE----------------------------EECSSCCCEEEEEEET-TT-EEE
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCcEEE----------------------------EEcCCCCCEEEEEEcC-CC-EEE
Confidence 34899999999999999999998643211 1124788999999999 44 999
Q ss_pred EEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc-----------cceeeec
Q 018293 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-----------GFKWAVA 208 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~ 208 (358)
+++.|++|++||+++++++..+. |...|++++|+|++ .++++|+.||.|++||+++.... .....|.
T Consensus 74 S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 74 VINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred EEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC
Confidence 99999999999999999888886 67899999999999 89999999999999999876542 1123567
Q ss_pred CCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec------------------CCceeEEEecC
Q 018293 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH------------------DKAVCTISYNP 270 (358)
Q Consensus 209 ~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~------------------~~~i~~i~~~~ 270 (358)
..|.+++|+|++...+++|+.||.| +||+++. .....+..| ...|++++|+|
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN---------EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTT---------EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC---------ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 8999999999766789999999999 9999886 445555444 57799999999
Q ss_pred CCCcEEEEEeCCCcEEEEecCCCCceeeEec---C-------------CCCceeEEEEEc----CCCCeEEEEEccC---
Q 018293 271 LVPNLLATGSTDKMVKLWDLSNNQPSCIASR---N-------------PKAGAVFSVAFS----EDSPFVLAIGGSK--- 327 (358)
Q Consensus 271 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~-------------~~~~~v~~~~~~----~~~~~~l~~~~~d--- 327 (358)
++ .+|++|+.||.|++||+++++......+ . .|..+|.+++|+ |++..++++|+.|
T Consensus 222 dg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 222 NS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp TS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred CC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 98 8999999999999999999875333222 1 135589999995 4544578888765
Q ss_pred --CeEEEEEc
Q 018293 328 --GKLEIWDT 335 (358)
Q Consensus 328 --g~i~vw~~ 335 (358)
+.+.+|++
T Consensus 301 ~~~~v~~~~~ 310 (902)
T 2oaj_A 301 DNQSLTMIDL 310 (902)
T ss_dssp SCCCEEEEEE
T ss_pred CCceEEEEec
Confidence 37889985
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=244.38 Aligned_cols=195 Identities=11% Similarity=0.117 Sum_probs=159.6
Q ss_pred CCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeeccccc-----ceeeEEEcCCCCcEEEEEeCCCcEEEEE
Q 018293 120 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTD-----KVQAVAWNHHSPQILLSGSFDRSVVMKD 194 (358)
Q Consensus 120 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~dg~i~i~d 194 (358)
.|...|.+++|+|+ +.+||+++.||.|++||.+. ++..+. |.. .+.+++|+|+| ++|++|+.||+|++||
T Consensus 83 ~~~~~V~~vawSPd-G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 83 QPVCYPRVCKPSPI-DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFS 157 (588)
T ss_dssp SCSCCEEEEEECSS-SSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEECCC-CCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEE
Confidence 45789999999999 67999999999999999544 666666 665 49999999999 9999999999999999
Q ss_pred cccCCC-------ccce----eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCc
Q 018293 195 ARISTH-------SGFK----WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKA 262 (358)
Q Consensus 195 ~~~~~~-------~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~ 262 (358)
+.++.. .... .+|...|.+++|+|++ +++++.|+.|++||+..... ......+ .+|...
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~------~~~~~tL~~~h~~~ 228 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSH------QPVSRMIQNASRRK 228 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSS------CCCEEEEECCCSSC
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCcc------ccceeeecccccCc
Confidence 998753 1211 3456799999999965 78888999999999987621 0123455 478889
Q ss_pred eeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEE--cCCCCeEEEEEccCCeEEEEEcc
Q 018293 263 VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF--SEDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 263 i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
|.+++|+ + ..|++++ ++.|++||+.+++. .....+|.+.+..++| +|++. .+++++.||+ ++|...
T Consensus 229 V~svaFs--g-~~LASa~-~~tIkLWd~~~~~~--~~~~~gh~~~V~~va~~~s~d~~-~La~a~edG~-klw~~d 296 (588)
T 2j04_A 229 ITDLKIV--D-YKVVLTC-PGYVHKIDLKNYSI--SSLKTGSLENFHIIPLNHEKEST-ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCCEEEE--T-TEEEEEC-SSEEEEEETTTTEE--EEEECSCCSCCCEEEETTCSSCE-EEEECSSCEE-EEEESS
T ss_pred EEEEEEE--C-CEEEEEe-CCeEEEEECCCCeE--EEEEcCCCceEEEEEeeeCCCCC-EEEEEcCCCC-EEEeec
Confidence 9999999 5 7888887 69999999998763 1223379999999999 99998 5899999999 999975
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=234.34 Aligned_cols=254 Identities=19% Similarity=0.303 Sum_probs=196.1
Q ss_pred CCcccceeeecCCccccCC---CceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCc
Q 018293 46 PAFPLCMAWLDCPLKDREK---GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT 122 (358)
Q Consensus 46 ~~~~~~~~~~~~~~~~s~~---~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 122 (358)
...+.|++| +|+ |++|++|+.||.|+|||+.+... .....+.+|.
T Consensus 39 ~~~v~~~~~-------~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-------------------------~~~~~~~~h~ 86 (368)
T 3mmy_A 39 DDSIGCLSF-------SPPTLPGNFLIAGSWANDVRCWEVQDSGQ-------------------------TIPKAQQMHT 86 (368)
T ss_dssp SSCEEEEEE-------CCTTSSSEEEEEEETTSEEEEEEECTTSC-------------------------EEEEEEEECS
T ss_pred CCceEEEEE-------cCCCCCceEEEEECCCCcEEEEEcCCCCc-------------------------eeEEEecccc
Confidence 334456666 788 69999999999999999975221 1113455799
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEE--cCCCCcEEEEEeCCCcEEEEEcccCCC
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAW--NHHSPQILLSGSFDRSVVMKDARISTH 200 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~ 200 (358)
..|.+++|+|+ +.+|++++.||.|++||+++++.+. +..|...|.+++| +|++ .++++++.||.|++||+++++.
T Consensus 87 ~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 87 GPVLDVCWSDD-GSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp SCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSC
T ss_pred CCEEEEEECcC-CCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcE
Confidence 99999999998 6799999999999999999988766 5569999999999 8888 8899999999999999998877
Q ss_pred ccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCC---CcEE
Q 018293 201 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLV---PNLL 276 (358)
Q Consensus 201 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~---~~~l 276 (358)
... ......+.++.+.+ ..+++++.++.+.+||++... ...... ..+...+.++.+.++. +..+
T Consensus 164 ~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T 3mmy_A 164 MMV-LQLPERCYCADVIY---PMAVVATAERGLIVYQLENQP--------SEFRRIESPLKHQHRCVAIFKDKQNKPTGF 231 (368)
T ss_dssp SEE-EECSSCEEEEEEET---TEEEEEEGGGCEEEEECSSSC--------EEEEECCCSCSSCEEEEEEEECTTSCEEEE
T ss_pred EEE-EecCCCceEEEecC---CeeEEEeCCCcEEEEEecccc--------chhhhccccccCCCceEEEcccCCCCCCeE
Confidence 653 34445677777765 378889999999999998752 111111 1233445556555543 1239
Q ss_pred EEEeCCCcEEEEecCCCCc-eeeEecCCCCc------------eeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 277 ATGSTDKMVKLWDLSNNQP-SCIASRNPKAG------------AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 277 ~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
++++.||.|++||++.... .....+..|.. .|.+++|+|++++ |++++.||.|++||+.+++.+..
T Consensus 232 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~s~~~dg~i~iwd~~~~~~~~~ 310 (368)
T 3mmy_A 232 ALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT-LATVGSDGRFSFWDKDARTKLKT 310 (368)
T ss_dssp EEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC-EEEEETTSCEEEEETTTTEEEEE
T ss_pred EEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE-EEEEccCCeEEEEECCCCcEEEE
Confidence 9999999999999998743 34455566655 6999999999995 88999999999999999887766
Q ss_pred cccc
Q 018293 344 RFSK 347 (358)
Q Consensus 344 ~~~~ 347 (358)
...+
T Consensus 311 ~~~~ 314 (368)
T 3mmy_A 311 SEQL 314 (368)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 5443
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3.3e-32 Score=237.54 Aligned_cols=281 Identities=9% Similarity=0.038 Sum_probs=207.1
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEee-ceeecCCcccceeeecCCccccCCCceEEecCCCCeEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVH-HHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEI 79 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~v 79 (358)
++++|++.+++++..++ .+++|+...+........ ........+.++.| +++++++++++.|+.|++
T Consensus 128 ~~~s~~~~~~~~~~~~~-----~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~s~~~d~~v~~ 195 (433)
T 3bws_A 128 VRFIDNTRLAIPLLEDE-----GMDVLDINSGQTVRLSPPEKYKKKLGFVETISI-------PEHNELWVSQMQANAVHV 195 (433)
T ss_dssp CEESSSSEEEEEBTTSS-----SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEE-------GGGTEEEEEEGGGTEEEE
T ss_pred EEEeCCCeEEEEeCCCC-----eEEEEECCCCeEeeecCcccccccCCceeEEEE-------cCCCEEEEEECCCCEEEE
Confidence 46889666666664444 578888776522111000 00011112234444 789999999999999999
Q ss_pred EEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceee
Q 018293 80 WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL 159 (358)
Q Consensus 80 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 159 (358)
||+.+++... .+..|...+.+++|+|++..++++++.|+.|++||+++++.+.
T Consensus 196 ~d~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 196 FDLKTLAYKA---------------------------TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EETTTCCEEE---------------------------EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EECCCceEEE---------------------------EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 9997543322 2335888999999999955444666689999999999998888
Q ss_pred eecccccceeeEEEcCCCCcEEEEEe--------CCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCC
Q 018293 160 TLEHHTDKVQAVAWNHHSPQILLSGS--------FDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 231 (358)
Q Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg 231 (358)
.+..+ ..+.+++|+|++ ..+++++ .|+.|++||+++++... ...+...+.+++|+|++..++++++.++
T Consensus 249 ~~~~~-~~~~~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 249 KTDKI-GLPRGLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKLID-TIGPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp ECCCC-SEEEEEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEEEE-EEEEEECEEEEEECSSTTEEEEEETTTT
T ss_pred EecCC-CCceEEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcEEe-eccCCCCcceEEECCCCCEEEEEecCCC
Confidence 88754 568999999999 6777777 58899999998876544 3455668899999997766778889999
Q ss_pred eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC---------------CCcEEEEecCCCCce
Q 018293 232 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST---------------DKMVKLWDLSNNQPS 296 (358)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~---------------dg~i~i~d~~~~~~~ 296 (358)
.|++||+.++ +....+. +...+.+++|+|++ .++++++. ||.|++||+.+++.
T Consensus 326 ~v~v~d~~~~---------~~~~~~~-~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~- 393 (433)
T 3bws_A 326 KIEVYDLKEK---------KVQKSIP-VFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV- 393 (433)
T ss_dssp EEEEEETTTT---------EEEEEEE-CSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE-
T ss_pred EEEEEECCCC---------cEEEEec-CCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEEECCCCcE-
Confidence 9999999876 4444444 67789999999998 77777765 57999999998874
Q ss_pred eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 297 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
+..+.. ...+.+++|+|+|+++++++..|+.|++|++..
T Consensus 394 -~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 394 -KEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp -EEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred -EEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 333333 356899999999997555555699999999864
No 117
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.4e-32 Score=233.84 Aligned_cols=193 Identities=15% Similarity=0.186 Sum_probs=155.8
Q ss_pred ccccCCCceEE--ecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCc
Q 018293 59 LKDREKGNFMA--VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN 136 (358)
Q Consensus 59 ~~~s~~~~~l~--~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 136 (358)
++|||||++|+ +++.|++|+|||+.+++... .+ .|...|.+++|+|+ ++
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~---------------------------~~-~~~~~V~~v~fspd-g~ 189 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKF---------------------------EI-ETRGEVKDLHFSTD-GK 189 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEE---------------------------EE-ECSSCCCEEEECTT-SS
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE---------------------------Ee-CCCCceEEEEEccC-Cc
Confidence 46699999976 45579999999997644332 12 37788999999999 67
Q ss_pred EEEEEEcCCeEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCCC----cEEEEEcccCCCc----cceee
Q 018293 137 ILASASADKQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFDR----SVVMKDARISTHS----GFKWA 206 (358)
Q Consensus 137 ~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~----~~~~~ 206 (358)
++++++.+ .+++|+..+++.+. ....|...|.+++|+|++ ..+++++.|+ .+++|++...... .....
T Consensus 190 ~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~ 267 (365)
T 4h5i_A 190 VVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN 267 (365)
T ss_dssp EEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES
T ss_pred eEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCC-CEEEEEecCCcceeEEeecccccceecceeeeeecC
Confidence 88888755 56777777776543 345688899999999999 8888888877 5888888765432 22345
Q ss_pred ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCCCcEEEEEeCCCcE
Q 018293 207 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGSTDKMV 285 (358)
Q Consensus 207 ~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~~~~dg~i 285 (358)
+...|++++|+|+ +.+|++|+.|+.|++||++++ +++..+ .+|..+|++++|+|++ ++|++|+.|++|
T Consensus 268 ~~~~V~~~~~Spd-g~~lasgs~D~~V~iwd~~~~---------~~~~~~~~gH~~~V~~v~fSpdg-~~laS~S~D~tv 336 (365)
T 4h5i_A 268 RFKGITSMDVDMK-GELAVLASNDNSIALVKLKDL---------SMSKIFKQAHSFAITEVTISPDS-TYVASVSAANTI 336 (365)
T ss_dssp SCSCEEEEEECTT-SCEEEEEETTSCEEEEETTTT---------EEEEEETTSSSSCEEEEEECTTS-CEEEEEETTSEE
T ss_pred CCCCeEeEEECCC-CCceEEEcCCCEEEEEECCCC---------cEEEEecCcccCCEEEEEECCCC-CEEEEEeCCCeE
Confidence 6788999999995 569999999999999999987 666664 7899999999999998 899999999999
Q ss_pred EEEecCCC
Q 018293 286 KLWDLSNN 293 (358)
Q Consensus 286 ~i~d~~~~ 293 (358)
+|||+...
T Consensus 337 rvw~ip~~ 344 (365)
T 4h5i_A 337 HIIKLPLN 344 (365)
T ss_dssp EEEECCTT
T ss_pred EEEEcCCC
Confidence 99999754
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.8e-32 Score=230.57 Aligned_cols=235 Identities=11% Similarity=0.170 Sum_probs=176.4
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+|+|||++|++|+.+| ++||++++...... .+...+..+++.+++..+++
T Consensus 26 ~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~ 75 (355)
T 3vu4_A 26 EFNQDQSCLILSTLKS-FEIYNVHPVAHIMS-----------------------------QEMRHLSKVRMLHRTNYVAF 75 (355)
T ss_dssp EECTTSSEEEEECSSE-EEEEEETTEEEEEE-----------------------------EECSCCCEEEECTTSSEEEE
T ss_pred EECCCCCEEEEEcCCE-EEEEecCCcceeee-----------------------------eecCCeEEEEEcCCCCEEEE
Confidence 3499999999998775 78999875332211 11124677778777444446
Q ss_pred EEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC-CCccceeeecCCeeeEEEcC
Q 018293 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWAVAADVESLAWDP 218 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~ 218 (358)
+++.|++|++||+.+++++..+. +...|.+++|+++. ++++ .|+.|++||+.+. +....... +...+++++
T Consensus 76 ~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~ 147 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN 147 (355)
T ss_dssp ECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET
T ss_pred EECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc
Confidence 78888999999999999988887 66799999999864 4444 4889999999987 44443332 444566666
Q ss_pred CCCCeEEE--EecCCeEEEEEcccCCCCCCCC------CCCc-cEEEeecCCceeEEEecCCCCcEEEEEeCCCc-EEEE
Q 018293 219 HAEHSFVV--SLEDGTIKGFDIRTAKSDPDST------SQQS-SFTLHAHDKAVCTISYNPLVPNLLATGSTDKM-VKLW 288 (358)
Q Consensus 219 ~~~~~~~~--~~~dg~i~i~d~~~~~~~~~~~------~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~ 288 (358)
..+++ |+.||.|++||+++........ ...+ ...+.+|...|++++|+|++ .+|++|+.|++ |++|
T Consensus 148 ---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g-~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 148 ---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVF 223 (355)
T ss_dssp ---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS-SEEEEEETTCSEEEEE
T ss_pred ---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC-CEEEEEeCCCCEEEEE
Confidence 35555 6889999999998753110000 0012 67889999999999999998 89999999998 9999
Q ss_pred ecCCCCceeeEecC-C-CCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 289 DLSNNQPSCIASRN-P-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 289 d~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
|+++++. +..+. + |...|.+++|+|+++ +|++++.|+.|++||+..+.
T Consensus 224 d~~~~~~--~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 224 KTEDGVL--VREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp ETTTCCE--EEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCS
T ss_pred ECCCCcE--EEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCC
Confidence 9999884 44554 4 899999999999999 58999999999999998754
No 119
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4e-31 Score=221.04 Aligned_cols=247 Identities=22% Similarity=0.363 Sum_probs=199.2
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 141 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 141 (358)
|+++ +||+|. |++|+|||+.+++.... ..+.+|...|++++|+|+ +++|++|
T Consensus 34 S~~~-~lAvg~-D~tV~iWd~~tg~~~~~-------------------------~~~~~~~~~V~~v~~~~~-~~~l~sg 85 (318)
T 4ggc_A 34 SSGN-VLAVAL-DNSVYLWSASSGDILQL-------------------------LQMEQPGEYISSVAWIKE-GNYLAVG 85 (318)
T ss_dssp CTTS-EEEEEE-TTEEEEEETTTCCEEEE-------------------------EECCSTTCCEEEEEECTT-SSEEEEE
T ss_pred CCCC-EEEEEe-CCEEEEEECCCCCEEEE-------------------------EEecCCCCeEEEEEECCC-CCEEEEE
Confidence 7775 788775 99999999987654432 134468899999999999 6799999
Q ss_pred EcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc-cceeeecCCeeeEEEcCCC
Q 018293 142 SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAVAADVESLAWDPHA 220 (358)
Q Consensus 142 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~ 220 (358)
+.||+|++||+++++++..+.+|...+.++.+.+ ..+++++.++.+++|+....... .....+...+..+.+.++
T Consensus 86 s~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 161 (318)
T 4ggc_A 86 TSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD- 161 (318)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-
T ss_pred ECCCcEEEeecCCceeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC-
Confidence 9999999999999999999999999888776653 68999999999999998876543 345568889999999995
Q ss_pred CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEE--EEeCCCcEEEEecCCCCceee
Q 018293 221 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA--TGSTDKMVKLWDLSNNQPSCI 298 (358)
Q Consensus 221 ~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~--~~~~dg~i~i~d~~~~~~~~~ 298 (358)
+.++++++.||.|++||+++++... ........+...|.++.++|+++..+. +++.++.|++||.+.....
T Consensus 162 ~~~l~s~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~-- 234 (318)
T 4ggc_A 162 GRHLASGGNDNLVNVWPSAPGEGGW-----VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL-- 234 (318)
T ss_dssp SSEEEEEETTSCEEEEESSCBTTBS-----CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE--
T ss_pred CCEEEEEecCcceeEEECCCCcccc-----cceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc--
Confidence 5589999999999999998764322 445667778899999999998866654 5567899999999888732
Q ss_pred EecCCCCceeEEEEEcCCCCeEEEE-EccCCeEEEEEccCCCccccccccC
Q 018293 299 ASRNPKAGAVFSVAFSEDSPFVLAI-GGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 299 ~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
....+...+..+.|+|++.+++++ |+.|+.|++||+.+++.+..+-+|.
T Consensus 235 -~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~ 284 (318)
T 4ggc_A 235 -SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT 284 (318)
T ss_dssp -EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred -ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCC
Confidence 233456779999999999875443 3479999999999999887766554
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=6.7e-31 Score=229.30 Aligned_cols=247 Identities=11% Similarity=0.088 Sum_probs=192.1
Q ss_pred ccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEE
Q 018293 59 LKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 138 (358)
Q Consensus 59 ~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 138 (358)
++|+|++.++++++.++.|++||+.+++.... .....+.+|...|.+++|+++ +.++
T Consensus 128 ~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~----------------------~~~~~~~~~~~~v~~~~~~~~-~~~~ 184 (433)
T 3bws_A 128 VRFIDNTRLAIPLLEDEGMDVLDINSGQTVRL----------------------SPPEKYKKKLGFVETISIPEH-NELW 184 (433)
T ss_dssp CEESSSSEEEEEBTTSSSEEEEETTTCCEEEE----------------------CCCHHHHTTCCEEEEEEEGGG-TEEE
T ss_pred EEEeCCCeEEEEeCCCCeEEEEECCCCeEeee----------------------cCcccccccCCceeEEEEcCC-CEEE
Confidence 34488888899999999999999986543321 111134578899999999988 6799
Q ss_pred EEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcC
Q 018293 139 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDP 218 (358)
Q Consensus 139 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 218 (358)
++++.|+.|++||+++++.+..+..|...+.+++|+|++..++++++.|+.|++||+++++... .......+.+++|+|
T Consensus 185 ~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~ 263 (433)
T 3bws_A 185 VSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR-KTDKIGLPRGLLLSK 263 (433)
T ss_dssp EEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-ECCCCSEEEEEEECT
T ss_pred EEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-EecCCCCceEEEEcC
Confidence 9999999999999999999999988999999999999994444566689999999998776544 233445689999999
Q ss_pred CCCCeEEEEe--------cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEec
Q 018293 219 HAEHSFVVSL--------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 290 (358)
Q Consensus 219 ~~~~~~~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~ 290 (358)
++. .+++++ .||.|++||++++ +.... ..|...+.+++|+|++..++++++.|+.|++||+
T Consensus 264 ~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~---------~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 264 DGK-ELYIAQFSASNQESGGGRLGIYSMDKE---------KLIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp TSS-EEEEEEEESCTTCSCCEEEEEEETTTT---------EEEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred CCC-EEEEEECCCCccccCCCeEEEEECCCC---------cEEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 655 666665 4889999999876 33333 3455678999999998556777889999999999
Q ss_pred CCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEcc---------------CCeEEEEEccCCCccccc
Q 018293 291 SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS---------------KGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 291 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---------------dg~i~vw~~~~~~~~~~~ 344 (358)
.+++. ...+. +...+.+++|+|++++ +++++. ||.|++||+.+++.+...
T Consensus 333 ~~~~~--~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 333 KEKKV--QKSIP-VFDKPNTIALSPDGKY-LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp TTTEE--EEEEE-CSSSEEEEEECTTSSE-EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred CCCcE--EEEec-CCCCCCeEEEcCCCCE-EEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 98764 33333 5567999999999996 444544 579999999988766543
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-32 Score=236.01 Aligned_cols=235 Identities=12% Similarity=0.034 Sum_probs=173.7
Q ss_pred CccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcE
Q 018293 58 PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 137 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 137 (358)
+++|||||+++|+++.|++|+ |....+ .+.+|...|.+++|+|+|
T Consensus 20 sv~~SpDG~~iASas~D~TV~--d~~~~~------------------------------~l~gh~~~v~~V~FsPdg--- 64 (588)
T 2j04_A 20 NLTWARDGTLYLTTFPDISIG--QPKYAK------------------------------DINCNSKNLFHVKEFPLE--- 64 (588)
T ss_dssp CEEECTTSCEEEECSSSEEEE--EECCCS------------------------------CCSSBGGGTEEEEEECCC---
T ss_pred EEEECCCCCEEEEEcCCceee--cccccc------------------------------eecCCCccEEEEEECCCC---
Confidence 445599999999999999999 643221 224799999999999994
Q ss_pred EEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecC-----Cee
Q 018293 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA-----DVE 212 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~i~ 212 (358)
.++.+.+|+.+. .....+ .|...|.+++|+|+| ..|++++.||.|++||... ...... +.. .+.
T Consensus 65 -----~~~~~~~~~~~~-~~~~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~ 133 (588)
T 2j04_A 65 -----FENKLDFELAQQ-NGLLNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYH 133 (588)
T ss_dssp -----CCCTTTTSCCCS-SCSSTT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEE
T ss_pred -----CcceEEEEeCCC-ceEeec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEE
Confidence 456665655432 223333 358899999999999 8999999999999999544 222122 333 499
Q ss_pred eEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE----eecCCceeEEEecCCCCcEEEEEeCCCcEEEE
Q 018293 213 SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL----HAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 288 (358)
+++|+|+ ++++++|+.||+|++||+..+.... .....+..+ .+|...|.+++|+|++ +++++.|+.|++|
T Consensus 134 svafSPD-G~~LAsgs~DGtVkIWd~~~~~l~~--~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlW 207 (588)
T 2j04_A 134 CFEWNPI-ESSIVVGNEDGELQFFSIRKNSENT--PEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSM 207 (588)
T ss_dssp EEEECSS-SSCEEEEETTSEEEEEECCCCTTTC--CCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEE
T ss_pred EEEEcCC-CCEEEEEcCCCEEEEEECCCCcccc--ccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEE
Confidence 9999995 5699999999999999998762100 000024555 5677899999999976 8888999999999
Q ss_pred ecCCCCce-eeEec-CCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccccC
Q 018293 289 DLSNNQPS-CIASR-NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 289 d~~~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
|+.+++.. ....+ .+|...|.+++|+ |+ .+|+++ ++.|++||+.+++.....+++.
T Consensus 208 d~~~~~~~~~~~tL~~~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~~~~~~~~~gh~ 265 (588)
T 2j04_A 208 TVSASSHQPVSRMIQNASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKNYSISSLKTGSL 265 (588)
T ss_dssp CCCSSSSCCCEEEEECCCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTTTEEEEEECSCC
T ss_pred ECCCCccccceeeecccccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCCCeEEEEEcCCC
Confidence 99887732 12334 4788899999999 56 577776 6999999999877643333433
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.2e-32 Score=233.45 Aligned_cols=295 Identities=11% Similarity=0.055 Sum_probs=183.8
Q ss_pred ceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccc-cccccCC-----ceecc
Q 018293 41 HHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKK-KKKSKKG-----KKSSI 114 (358)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~ 114 (358)
+..+++..|.++.|... ++++..|++++.|+.|.+|+........... ...... ....... .....
T Consensus 10 ~~lpl~~~p~~~~w~~~----~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 81 (393)
T 4gq1_A 10 YQLPLNVRPYTTTWCSQ----SPSCSNLLAIGHDTGITIYCASEEQTPGSTG----LTLQELFTIQTGLPTLHLSFSSSC 81 (393)
T ss_dssp EECCTTCCEEEEEECTT----SGGGTTEEEEEESSEEEEEEEEECCSSSCCS----EEEEEEEEEECSSCEEEEEECTTC
T ss_pred eEecCCCCCeEEEEeCC----CCCCCCEEEEECCCCEEEEECCCCCcccccc----cceeeeEEEecCCCeeeEeecCCc
Confidence 44566778889999543 4554444444568899999875432211000 000000 0000000 00001
Q ss_pred ccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce-----eeeecccccceeeEEEcC--------CCCcEE
Q 018293 115 KYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC-----NLTLEHHTDKVQAVAWNH--------HSPQIL 181 (358)
Q Consensus 115 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~~l 181 (358)
......|...+....+.++ ..+|++++.|++|++||+++++. +..+.+|.+.|++++|+| ++ ++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~l 159 (393)
T 4gq1_A 82 SYSENLHDGDGNVNSSPVY-SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVI 159 (393)
T ss_dssp EEECC----------CCEE-EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEE
T ss_pred cccccccCCCcceeecCCC-CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-CEE
Confidence 1122234444444444445 67899999999999999988754 345688999999999997 56 899
Q ss_pred EEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCC------------
Q 018293 182 LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTS------------ 249 (358)
Q Consensus 182 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~------------ 249 (358)
++++.|++|++||+++.........+...+.+++|+|++.+++++++.||.|++||+++++.......
T Consensus 160 as~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 160 ASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred EEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 99999999999999988777777889999999999998777899999999999999988743221100
Q ss_pred ----CCccEEEeecCCceeEEEec-CCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEE-------------
Q 018293 250 ----QQSSFTLHAHDKAVCTISYN-PLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV------------- 311 (358)
Q Consensus 250 ----~~~~~~~~~~~~~i~~i~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~------------- 311 (358)
........+|...+.++.|+ |++ ..|++++.|+.+++||+..++. ...+..|...+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg-~~l~s~s~d~~i~vwd~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDG-SGILAMCKSGAWLRWNLFANND--YNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTT-CEEEEECTTSEEEEEEC---------------------CCSCSEEEECSSC
T ss_pred ccccceeeeecccccccceeeeeecCCC-CEEEEEeCCCCEEEEECccCCC--CceEeeecCccccEEEccccccccccC
Confidence 00112234677889999987 666 8999999999999999987652 22233333333322
Q ss_pred ------EEcCCCCeEEEEEccCCeEEEEEccCCCccccccccC
Q 018293 312 ------AFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 348 (358)
Q Consensus 312 ------~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 348 (358)
.+.+.+..++++|+.||.|++||+.+++.+.....+.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~ 359 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG 359 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence 2223344467888999999999999998877665544
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-31 Score=245.24 Aligned_cols=212 Identities=25% Similarity=0.369 Sum_probs=182.1
Q ss_pred ccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECC--CCceeeeecccccceeeEEEcCC--CCcEEEEEeCCCcEEE
Q 018293 117 KKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVM 192 (358)
Q Consensus 117 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i 192 (358)
.+.+|.+.|++++|+|+ +.+|++|+.||.|++||+. +++.+..+.+|..+|++++|+|+ + .++++++.||.|++
T Consensus 4 ~l~gH~~~V~~l~~s~d-g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 4 IANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLI 81 (753)
T ss_dssp ----CCCCEEEECCCSS-SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEE
T ss_pred ecccCcceeEEEEECCC-CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEE
Confidence 45689999999999999 6689999999999999998 55778888999999999999987 6 89999999999999
Q ss_pred EEcccCC--CccceeeecCCeeeEEEcCCC-CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEec
Q 018293 193 KDARIST--HSGFKWAVAADVESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYN 269 (358)
Q Consensus 193 ~d~~~~~--~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 269 (358)
||+.+++ .......+...|.+++|+|+. +..+++|+.||.|++||++.... .....+..|...|.+++|+
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~-------~~~~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-------TSPIIIDAHAIGVNSASWA 154 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-------CCCEEEECCSSCEEEEEEC
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-------cceeEeecCCCceEEEEec
Confidence 9999875 444455688999999999962 66999999999999999987632 4456778899999999999
Q ss_pred CC-------------CCcEEEEEeCCCcEEEEecCCCCc--eeeEecCCCCceeEEEEEcCC---CCeEEEEEccCCeEE
Q 018293 270 PL-------------VPNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSED---SPFVLAIGGSKGKLE 331 (358)
Q Consensus 270 ~~-------------~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~dg~i~ 331 (358)
|. + .++++|+.||.|++||++++.. .....+.+|...|.+++|+|+ +. ++++|+.||.|+
T Consensus 155 p~~~~~~~~~~~~~d~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I~ 232 (753)
T 3jro_A 155 PATIEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCI 232 (753)
T ss_dssp CCC---------CGGG-CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCEE
T ss_pred CcccccccccccCCCC-CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEEE
Confidence 94 5 8999999999999999988743 345667889999999999999 77 699999999999
Q ss_pred EEEccCCC
Q 018293 332 IWDTLSDA 339 (358)
Q Consensus 332 vw~~~~~~ 339 (358)
+||+.+++
T Consensus 233 iwd~~~~~ 240 (753)
T 3jro_A 233 IWTQDNEQ 240 (753)
T ss_dssp EEEESSSS
T ss_pred EecCCCCC
Confidence 99999864
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.1e-29 Score=206.73 Aligned_cols=184 Identities=16% Similarity=0.153 Sum_probs=141.0
Q ss_pred CcEEEEEE--cCCeEEEEEC-CCCceeeeecccccceeeEEEcC---CCCcEEEEEeCCCcEEEEEcccCCCccceeeec
Q 018293 135 RNILASAS--ADKQVKIWDV-AAGKCNLTLEHHTDKVQAVAWNH---HSPQILLSGSFDRSVVMKDARISTHSGFKWAVA 208 (358)
Q Consensus 135 ~~~l~s~~--~dg~v~iwd~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 208 (358)
++++.+++ .|+.|++|++ .+++.+..+..|...++.++|++ ++ .+|++++.|++|++||+++++....+..+.
T Consensus 145 g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 145 RRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 54555533 5999999999 45888888888999999999998 55 899999999999999999998776555433
Q ss_pred ---CCeeeEEEcCCCCCeE------------EEEecCCeEEEEEcccCCCCCCCCCCCccEEE-----eecCCceeEEEe
Q 018293 209 ---ADVESLAWDPHAEHSF------------VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-----HAHDKAVCTISY 268 (358)
Q Consensus 209 ---~~i~~~~~~~~~~~~~------------~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~i~~ 268 (358)
..+.+++|+|++. ++ ++|+.|++|++||..++ +.+..+ .+|...+.+..+
T Consensus 224 ~~v~~v~~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~tg---------k~l~v~~~~~p~Gh~~~~lsg~~ 293 (356)
T 2w18_A 224 SYQASVCHKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKTT---------LSVGVMLYCLPPGQAGRFLEGDV 293 (356)
T ss_dssp ---CCCEEEEEEETTE-EEEEEC------------CCEEEEEEETTTT---------EEEEEEEECCCTTCCCCEEEEEE
T ss_pred cceeeeEEEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCCC---------EEEEEEEeeccCCCcceeEcccc
Confidence 3577778999654 43 56888999999999877 433333 255555544444
Q ss_pred cCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeE-EEEEcCCCCeEEEEEccCCeEEEEEc
Q 018293 269 NPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF-SVAFSEDSPFVLAIGGSKGKLEIWDT 335 (358)
Q Consensus 269 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~vw~~ 335 (358)
+ + .++++|+.|++|+|||+.+++ ++..+.+|...+. +++|+|||+ +|++|+.|++|+|||+
T Consensus 294 s--g-~~lASgS~DgTIkIWDl~tGk--~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 294 K--D-HCAAAILTSGTIAIWDLLLGQ--CTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp E--T-TEEEEEETTSCEEEEETTTCS--EEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred C--C-CEEEEEcCCCcEEEEECCCCc--EEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecC
Confidence 4 4 789999999999999999998 6777888876555 589999999 4999999999999996
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=3.5e-29 Score=215.48 Aligned_cols=236 Identities=14% Similarity=0.107 Sum_probs=183.0
Q ss_pred ceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCC
Q 018293 66 NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK 145 (358)
Q Consensus 66 ~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 145 (358)
.++++++.|+.|++||+.+++... .+..| ..+.+++|+|++..++++++.|+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~---------------------------~~~~~-~~~~~~~~s~dg~~l~~~~~~d~ 54 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTA---------------------------TIPVG-SNPMGAVISPDGTKVYVANAHSN 54 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEE---------------------------EEECS-SSEEEEEECTTSSEEEEEEGGGT
T ss_pred EEEEEcCCCCEEEEEECCCCeEEE---------------------------EeecC-CCcceEEECCCCCEEEEECCCCC
Confidence 468899999999999997654332 22234 45899999999554557788999
Q ss_pred eEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEE
Q 018293 146 QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFV 225 (358)
Q Consensus 146 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 225 (358)
.|++||+.+++.+..+..+. .+.+++|+|++..++++++.++.|++||+.+++... .......+.+++|+|++..+++
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG-TVKTGKSPLGLALSPDGKKLYV 132 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEECSSSEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE-EEeCCCCcceEEECCCCCEEEE
Confidence 99999999999988887554 899999999994444566678999999999877655 3345567899999997665557
Q ss_pred EEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCC
Q 018293 226 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA 305 (358)
Q Consensus 226 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 305 (358)
+++.++.|++||++++ +....+..+ ..+.+++|+|++..++++++.++.|++||+++++. ..... +.
T Consensus 133 ~~~~~~~v~~~d~~~~---------~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~-~~ 199 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTK---------AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV--IDTVK-VE 199 (391)
T ss_dssp EETTTTEEEEEETTTT---------EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEE-CS
T ss_pred EeCCCCEEEEEECCCC---------cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE--EEEEe-cC
Confidence 8888999999999876 555566555 45699999999844447788899999999998863 33332 45
Q ss_pred ceeEEEEEcCCCCeEEEEEc--cCCeEEEEEccCCCccccc
Q 018293 306 GAVFSVAFSEDSPFVLAIGG--SKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 306 ~~v~~~~~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~ 344 (358)
..+.+++|+|+++++++++. .++.|++||+.+++.+...
T Consensus 200 ~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE
T ss_pred CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEE
Confidence 67899999999996444443 6899999999988765543
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.2e-28 Score=200.59 Aligned_cols=187 Identities=13% Similarity=0.138 Sum_probs=140.0
Q ss_pred CCCceEEecC--CCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCC---CCCcE
Q 018293 63 EKGNFMAVGS--MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK---EFRNI 137 (358)
Q Consensus 63 ~~~~~l~~g~--~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~ 137 (358)
++++++.+++ .|+.|++|++.... +....+.+|...++.++|++ + +.+
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG--------------------------~~~~s~~~~~~~v~~l~fs~~~g~-~~~ 195 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDG--------------------------GGKENQFLMPPEETILTFAEVQGM-QEA 195 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTS--------------------------CEEEEEEECCCSSCEEEEEEEETS-TTE
T ss_pred CCCcEEEecccCCCCcEEEEEECCCC--------------------------ceeeeeccCCCceeeEEeeccCCC-Cce
Confidence 4677777743 69999999995311 11223446888888888888 4 679
Q ss_pred EEEEEcCCeEEEEECCCCceeeeecccc---cceeeEEEcCCCCcEE------------EEEeCCCcEEEEEcccCCCcc
Q 018293 138 LASASADKQVKIWDVAAGKCNLTLEHHT---DKVQAVAWNHHSPQIL------------LSGSFDRSVVMKDARISTHSG 202 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l------------~~~~~dg~i~i~d~~~~~~~~ 202 (358)
|++|+.|++|+|||++++++++++.+|. ..+.+++|+|++ .++ ++|+.|++|++||..+++...
T Consensus 196 LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG-~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~ 274 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMG-LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVG 274 (356)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETT-EEEEEEC------------CCEEEEEEETTTTEEEE
T ss_pred EEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCC-CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEE
Confidence 9999999999999999999999998654 357777999998 554 568889999999998876543
Q ss_pred cee-----eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCcee-EEEecCCCCcEE
Q 018293 203 FKW-----AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC-TISYNPLVPNLL 276 (358)
Q Consensus 203 ~~~-----~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~-~i~~~~~~~~~l 276 (358)
... ++...+.+..++ +.++++++.|++|++||+.++ +.+..+.+|...+. +++|+|++ .+|
T Consensus 275 v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tG---------k~l~tL~gH~~~vvs~vafSPDG-~~L 341 (356)
T 2w18_A 275 VMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWDLLLG---------QCTALLPPVSDQHWSFVKWSGTD-SHL 341 (356)
T ss_dssp EEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEETTTC---------SEEEEECCC--CCCCEEEECSSS-SEE
T ss_pred EEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEECCCC---------cEEEEecCCCCCeEEEEEECCCC-CEE
Confidence 221 222223333332 347899999999999999988 78888988877655 68999998 899
Q ss_pred EEEeCCCcEEEEec
Q 018293 277 ATGSTDKMVKLWDL 290 (358)
Q Consensus 277 ~~~~~dg~i~i~d~ 290 (358)
++|+.|++|+|||+
T Consensus 342 aSGS~D~TIklWd~ 355 (356)
T 2w18_A 342 LAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEECCCcEEEecC
Confidence 99999999999996
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=8.9e-27 Score=207.42 Aligned_cols=286 Identities=12% Similarity=0.095 Sum_probs=207.8
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~ 81 (358)
.++|++.+++++..++ .+.+|+...++....+. ....+. .++|+|||++|++++.|+.|++||
T Consensus 144 ~~~p~~~~~vs~~~d~-----~V~v~D~~t~~~~~~i~-----~g~~~~-------~v~~spdg~~l~v~~~d~~V~v~D 206 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAG-----QIALVDGDSKKIVKVID-----TGYAVH-------ISRMSASGRYLLVIGRDARIDMID 206 (543)
T ss_dssp CCCGGGEEEEEEGGGT-----EEEEEETTTCCEEEEEE-----CSTTEE-------EEEECTTSCEEEEEETTSEEEEEE
T ss_pred ccCCCCEEEEEEcCCC-----eEEEEECCCceEEEEEe-----cCcccc-------eEEECCCCCEEEEECCCCeEEEEE
Confidence 4788888777776665 78888887652211111 111122 345699999999999999999999
Q ss_pred c--ccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCC----CCCcEEEEEE-cCCeEEEEECCC
Q 018293 82 L--DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK----EFRNILASAS-ADKQVKIWDVAA 154 (358)
Q Consensus 82 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~~l~s~~-~dg~v~iwd~~~ 154 (358)
+ .+++... .+. +...+..++|+| + ++++++++ .+++|.+||..+
T Consensus 207 ~~~~t~~~~~---------------------------~i~-~g~~p~~va~sp~~~~d-g~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 207 LWAKEPTKVA---------------------------EIK-IGIEARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp TTSSSCEEEE---------------------------EEE-CCSEEEEEEECCSTTCT-TTEEEEEEEESSEEEEEETTT
T ss_pred CcCCCCcEEE---------------------------EEe-cCCCcceEEeCCCcCCC-CCEEEEEEccCCeEEEEeccc
Confidence 9 4433221 122 345689999999 8 55777776 589999999999
Q ss_pred Cceeeeeccc----------c-cceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc-ceeeecCCeeeEEEcCCCCC
Q 018293 155 GKCNLTLEHH----------T-DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWAVAADVESLAWDPHAEH 222 (358)
Q Consensus 155 ~~~~~~~~~~----------~-~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 222 (358)
++++..+..+ . ..+.++.++|+++.++++...++.|.+||..+.+... ....+...+..+.|+|++..
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRY 337 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCE
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCE
Confidence 9988887642 2 2688999999887788888899999999998766443 12345567889999997664
Q ss_pred eEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee----cCCceeEEEecCCCCcEEEEEe-CCCcEEEEecCCCC---
Q 018293 223 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA----HDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLSNNQ--- 294 (358)
Q Consensus 223 ~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~----~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~d~~~~~--- 294 (358)
+++++..+++|.+||..++ +....+.. |.+....+ ++|+++.+++++. .|++|.+||+.+..
T Consensus 338 l~va~~~~~~v~v~D~~tg---------~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~ 407 (543)
T 1nir_A 338 FMTAANNSNKVAVIDSKDR---------RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ 407 (543)
T ss_dssp EEEEEGGGTEEEEEETTTT---------EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred EEEEecCCCeEEEEECCCC---------eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch
Confidence 5556667899999999987 55555553 44333333 5787546777775 58999999998721
Q ss_pred --ceeeEecCCCCceeEEEEEcCCCCeEEEEEc-------cCCeEEEEEccCCCccccc
Q 018293 295 --PSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-------SKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 295 --~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-------~dg~i~vw~~~~~~~~~~~ 344 (358)
...+..+..|...+..++++|++++ |++++ .+++|.+||+.+++...+.
T Consensus 408 ~~~~~v~~l~~~g~~~~~v~~~pdg~~-l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~ 465 (543)
T 1nir_A 408 YAWKKVAELQGQGGGSLFIKTHPKSSH-LYVDTTFNPDARISQSVAVFDLKNLDAKYQV 465 (543)
T ss_dssp TBTSEEEEEECSCSCCCCEECCTTCCE-EEECCTTCSSHHHHTCEEEEETTCTTSCCEE
T ss_pred hcCeEEEEEEcCCCCceEEEcCCCCCc-EEEecCCCCCcccCceEEEEECCCCCCCeEE
Confidence 2367778888788889999999996 66655 2679999999999877443
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=6.8e-27 Score=208.15 Aligned_cols=305 Identities=11% Similarity=0.102 Sum_probs=213.3
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEec--cCCCCCceEeeceeecCCcccceeeecCCccccC----CCceEEecCC-
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEE--SDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE----KGNFMAVGSM- 73 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~----~~~~l~~g~~- 73 (358)
+.|+|+++.|+++..++ .|.+|+. ... .. .........+ ..++|+| +|++|++++.
T Consensus 184 v~~spdg~~l~v~~~d~-----~V~v~D~~~~t~---~~--~~~i~~g~~p-------~~va~sp~~~~dg~~l~v~~~~ 246 (543)
T 1nir_A 184 SRMSASGRYLLVIGRDA-----RIDMIDLWAKEP---TK--VAEIKIGIEA-------RSVESSKFKGYEDRYTIAGAYW 246 (543)
T ss_dssp EEECTTSCEEEEEETTS-----EEEEEETTSSSC---EE--EEEEECCSEE-------EEEEECCSTTCTTTEEEEEEEE
T ss_pred EEECCCCCEEEEECCCC-----eEEEEECcCCCC---cE--EEEEecCCCc-------ceEEeCCCcCCCCCEEEEEEcc
Confidence 36899999999997765 7888888 433 11 1122222222 2455699 9999999985
Q ss_pred CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCc-ccEEEEecCCCCCcEEEEEEcCCeEEEEEC
Q 018293 74 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT-DSVLGLAWNKEFRNILASASADKQVKIWDV 152 (358)
Q Consensus 74 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 152 (358)
+++|.|||..+.+.+......+. ......-|. ..+.++.++|+++.++++...++.|.+||+
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~-----------------~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~ 309 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGM-----------------TVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 309 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEE-----------------CSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred CCeEEEEeccccccceeecccCc-----------------ccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEe
Confidence 89999999987655443221100 000000133 379999999987888888889999999999
Q ss_pred CCCceee--eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceee----ecCCeeeEEEcCCCCCeEEE
Q 018293 153 AAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA----VAADVESLAWDPHAEHSFVV 226 (358)
Q Consensus 153 ~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~ 226 (358)
.+.+.+. .+. +...+..+.|+|++..+++++..+++|.+||+.+++....... |......+ ++|+++..+++
T Consensus 310 ~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s 387 (543)
T 1nir_A 310 KDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWST 387 (543)
T ss_dssp TTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEE
T ss_pred cCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEe
Confidence 8876544 443 5667889999999933444556689999999998876543332 32222222 46765666777
Q ss_pred Ee-cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe-------CCCcEEEEecCCCCce-e
Q 018293 227 SL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-------TDKMVKLWDLSNNQPS-C 297 (358)
Q Consensus 227 ~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~-~ 297 (358)
+. .|++|.+||+.+.... ....+.+..+..|...+..++++|++ ++|++++ .+++|.+||+.+.+.. .
T Consensus 388 ~~~~d~~V~v~d~~~~~~~--~~~~~~v~~l~~~g~~~~~v~~~pdg-~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~ 464 (543)
T 1nir_A 388 SHLGDGSISLIGTDPKNHP--QYAWKKVAELQGQGGGSLFIKTHPKS-SHLYVDTTFNPDARISQSVAVFDLKNLDAKYQ 464 (543)
T ss_dssp EBSSSSEEEEEECCTTTCT--TTBTSEEEEEECSCSCCCCEECCTTC-CEEEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred ccCCCceEEEEEeCCCCCc--hhcCeEEEEEEcCCCCceEEEcCCCC-CcEEEecCCCCCcccCceEEEEECCCCCCCeE
Confidence 65 5899999999872110 01127788899998888999999998 7888876 2679999999998743 1
Q ss_pred eEe------cCCCCceeEEEEEcCCCCeEEEEE----ccCCeEEEEEccCCCccccc
Q 018293 298 IAS------RNPKAGAVFSVAFSEDSPFVLAIG----GSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 298 ~~~------~~~~~~~v~~~~~~~~~~~~l~~~----~~dg~i~vw~~~~~~~~~~~ 344 (358)
... +..+...+..+.|+|+|++++++. +.|+.|.|||..+++++...
T Consensus 465 ~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i 521 (543)
T 1nir_A 465 VLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVV 521 (543)
T ss_dssp EECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEE
T ss_pred EeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEee
Confidence 211 134567899999999999866653 24799999999999877553
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=5.8e-26 Score=191.65 Aligned_cols=283 Identities=10% Similarity=0.126 Sum_probs=178.1
Q ss_pred CCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCC-CeEEEEEcc-
Q 018293 6 NDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-PAIEIWDLD- 83 (358)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-g~i~vw~~~- 83 (358)
.++.++++...+ + .+++|+..... .+...........+.++.| +|+|++|++++.+ +.|.+|+++
T Consensus 3 ~~~~l~~~~~~~--~--~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~v~~~~~~~ 69 (343)
T 1ri6_A 3 LKQTVYIASPES--Q--QIHVWNLNHEG--ALTLTQVVDVPGQVQPMVV-------SPDKRYLYVGVRPEFRVLAYRIAP 69 (343)
T ss_dssp CEEEEEEEEGGG--T--EEEEEEECTTS--CEEEEEEEECSSCCCCEEE-------CTTSSEEEEEETTTTEEEEEEECT
T ss_pred ceEEEEEeCCCC--C--eEEEEEECCCC--cEEEeeeEecCCCCceEEE-------CCCCCEEEEeecCCCeEEEEEecC
Confidence 345555553332 2 66666653221 1111112223334445544 8999988888776 999999997
Q ss_pred -cccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE-cCCeEEEEECC---CCcee
Q 018293 84 -VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-ADKQVKIWDVA---AGKCN 158 (358)
Q Consensus 84 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwd~~---~~~~~ 158 (358)
++... ....+..+ ..+..++|+|++ +++++++ .++.|.+||+. ..+..
T Consensus 70 ~~~~~~-------------------------~~~~~~~~-~~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~~~ 122 (343)
T 1ri6_A 70 DDGALT-------------------------FAAESALP-GSLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVGVV 122 (343)
T ss_dssp TTCCEE-------------------------EEEEEECS-SCCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred CCCcee-------------------------eccccccC-CCCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCcccccc
Confidence 22111 11111122 278899999995 5555554 58999999994 34455
Q ss_pred eeecccccceeeEEEcCCCCcEEEEEe-CCCcEEEEEccc-CCCccc-----eeeecCCeeeEEEcCCCCCeEEEEecCC
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARI-STHSGF-----KWAVAADVESLAWDPHAEHSFVVSLEDG 231 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~dg 231 (358)
..+..+ ..+.+++|+|++ +.+++++ .++.|.+||+.+ ++.... .......+..++|+|++..+++++..++
T Consensus 123 ~~~~~~-~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 123 DVVEGL-DGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEECCC-TTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ccccCC-CCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 555533 458899999999 6566665 899999999987 432211 1112346788999997664555666899
Q ss_pred eEEEEEcccCCCCCCCCCCCccEEEee---c---CCceeEEEecCCCCcEEEEEeCCCcEEEEecC--CCCceeeEecCC
Q 018293 232 TIKGFDIRTAKSDPDSTSQQSSFTLHA---H---DKAVCTISYNPLVPNLLATGSTDKMVKLWDLS--NNQPSCIASRNP 303 (358)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~~~~~---~---~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~ 303 (358)
.|.+||+...... ......... . ...+..++|+|++..+++++..++.|.+||+. ++....+.....
T Consensus 201 ~i~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 275 (343)
T 1ri6_A 201 SVDVWELKDPHGN-----IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT 275 (343)
T ss_dssp EEEEEESSCTTSC-----CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred EEEEEEecCCCCc-----EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC
Confidence 9999999642110 011222221 1 23566899999984344456679999999998 333333444444
Q ss_pred CCceeEEEEEcCCCCeEEEEEccCCeEEEEEcc
Q 018293 304 KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 304 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
+.. +..++|+|+|+++++++..++.|.+|++.
T Consensus 276 ~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 276 ETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 433 88899999999756555578999999654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4.5e-26 Score=197.01 Aligned_cols=230 Identities=12% Similarity=0.102 Sum_probs=169.7
Q ss_pred CceEEecCCC------CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEE
Q 018293 65 GNFMAVGSME------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 138 (358)
Q Consensus 65 ~~~l~~g~~d------g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 138 (358)
+..++.++.+ +.|++||++... . ..+.+|...|.+++|+|+ ++.|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~---------------------------~~l~~~~~~v~~~~~Spd-g~~l 193 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN-Q---------------------------FVVHRSPQPLMSPAWSPD-GSKL 193 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS-C---------------------------EEEEEESSCEEEEEECTT-SSEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC-C---------------------------EEEeCCCCcceeeEEcCC-CCEE
Confidence 5566665544 799999986321 1 233458889999999999 6688
Q ss_pred EEEEcCC---eEEEEECCCCceeeeecccccceeeEEEcCCCCcEEE-EEeCCCc--EEEEEcccCCCccceeeecCCee
Q 018293 139 ASASADK---QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL-SGSFDRS--VVMKDARISTHSGFKWAVAADVE 212 (358)
Q Consensus 139 ~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~i~ 212 (358)
++++.++ .|++||+.+++.. .+..|...+.+++|+|++ +.|+ +++.++. |++||+.+++.. ....+...+.
T Consensus 194 a~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg-~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~ 270 (415)
T 2hqs_A 194 AYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNT 270 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEE
T ss_pred EEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCC-CEEEEEEecCCCceEEEEECCCCCEE-eCcCCCCccc
Confidence 8888875 9999999998765 456678889999999999 5555 7776665 999999876653 3445677899
Q ss_pred eEEEcCCCCCeEEEEec-CC--eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC---CcEE
Q 018293 213 SLAWDPHAEHSFVVSLE-DG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD---KMVK 286 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d---g~i~ 286 (358)
+++|+|++. .++.++. ++ .|.+||+.++ . ...+..+...+.+++|+|+| ++|++++.+ ..|+
T Consensus 271 ~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~---------~-~~~l~~~~~~~~~~~~spdG-~~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 271 EPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGG---------A-PQRITWEGSQNQDADVSSDG-KFMVMVSSNGGQQHIA 338 (415)
T ss_dssp EEEECTTSS-EEEEEECTTSSCEEEEEETTSS---------C-CEECCCSSSEEEEEEECTTS-SEEEEEEECSSCEEEE
T ss_pred ceEECCCCC-EEEEEECCCCCcEEEEEECCCC---------C-EEEEecCCCcccCeEECCCC-CEEEEEECcCCceEEE
Confidence 999999765 5555554 55 6777788765 2 33445566788999999999 677766653 5799
Q ss_pred EEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCC---eEEEEEccCCCccccc
Q 018293 287 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG---KLEIWDTLSDAGISNR 344 (358)
Q Consensus 287 i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~vw~~~~~~~~~~~ 344 (358)
+||+.+++. ..+..+. .+.+++|+|+|++ |++++.++ .|++||+.. ....++
T Consensus 339 ~~d~~~~~~---~~l~~~~-~~~~~~~spdg~~-l~~~s~~~~~~~l~~~d~~g-~~~~~l 393 (415)
T 2hqs_A 339 KQDLATGGV---QVLSSTF-LDETPSLAPNGTM-VIYSSSQGMGSVLNLVSTDG-RFKARL 393 (415)
T ss_dssp EEETTTCCE---EECCCSS-SCEEEEECTTSSE-EEEEEEETTEEEEEEEETTS-CCEEEC
T ss_pred EEECCCCCE---EEecCCC-CcCCeEEcCCCCE-EEEEEcCCCccEEEEEECCC-CcEEEe
Confidence 999998873 3444443 7999999999996 55566555 799999874 334433
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=9.3e-26 Score=189.61 Aligned_cols=282 Identities=8% Similarity=-0.004 Sum_probs=188.5
Q ss_pred ccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecC-CCCeEEEEE
Q 018293 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS-MEPAIEIWD 81 (358)
Q Consensus 3 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~vw~ 81 (358)
|.++++.++++...+. .+.+|+...++....... . ...+ ++ +|+|+|+++++++ .++.|.+||
T Consensus 5 ~~~~~~~~~v~~~~~~----~v~~~d~~~~~~~~~~~~---~-~~~~-~~-------~~s~dg~~l~~~~~~~~~i~~~d 68 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLR----RISFFSTDTLEILNQITL---G-YDFV-DT-------AITSDCSNVVVTSDFCQTLVQIE 68 (331)
T ss_dssp --CCCCEEEEEEGGGT----EEEEEETTTCCEEEEEEC---C-CCEE-EE-------EECSSSCEEEEEESTTCEEEEEE
T ss_pred EcCCCCEEEEEecCCC----eEEEEeCcccceeeeEEc---c-CCcc-eE-------EEcCCCCEEEEEeCCCCeEEEEE
Confidence 5666666555544332 888888876522111111 1 1112 33 4489999666555 489999999
Q ss_pred cccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCC---eEEEEECCCCcee
Q 018293 82 LDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK---QVKIWDVAAGKCN 158 (358)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~ 158 (358)
..+++.. ...+..+..+..+++|+|+ +++++++..++ .|.+||+.+++.+
T Consensus 69 ~~~~~~~--------------------------~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~i~v~d~~~~~~~ 121 (331)
T 3u4y_A 69 TQLEPPK--------------------------VVAIQEGQSSMADVDITPD-DQFAVTVTGLNHPFNMQSYSFLKNKFI 121 (331)
T ss_dssp CSSSSCE--------------------------EEEEEECSSCCCCEEECTT-SSEEEECCCSSSSCEEEEEETTTTEEE
T ss_pred CCCCcee--------------------------EEecccCCCCccceEECCC-CCEEEEecCCCCcccEEEEECCCCCeE
Confidence 9765431 1112234455555999999 55777555553 8999999999888
Q ss_pred eeecccccceeeEEEcCCCCcEEEEEeCCCc-EEEEEcccCCCcc----ceeeecCCeeeEEEcCCCCCeEEEEecCCeE
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFDRS-VVMKDARISTHSG----FKWAVAADVESLAWDPHAEHSFVVSLEDGTI 233 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i 233 (358)
..+..+ ....+++|+|++..++++...++. +.+|++....... ........+..++|+|++..+++++..++.|
T Consensus 122 ~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 200 (331)
T 3u4y_A 122 STIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSI 200 (331)
T ss_dssp EEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeE
Confidence 877643 456899999999556666667788 9999987544321 1123345688999999766566666678999
Q ss_pred EEEEcccCCCCCCCCCCCc---cEEEeecCCceeEEEecCCCCcEEE-EEeCCCcEEEEecCCCCceeeEecCCC----C
Q 018293 234 KGFDIRTAKSDPDSTSQQS---SFTLHAHDKAVCTISYNPLVPNLLA-TGSTDKMVKLWDLSNNQPSCIASRNPK----A 305 (358)
Q Consensus 234 ~i~d~~~~~~~~~~~~~~~---~~~~~~~~~~i~~i~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~----~ 305 (358)
.+||+.++ .. +..+.. ...+..++|+|++ ++++ +...++.|.+||+.+++...+..+..+ .
T Consensus 201 ~v~d~~~~---------~~~~~~~~~~~-~~~~~~~~~spdg-~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 269 (331)
T 3u4y_A 201 GILETQNP---------ENITLLNAVGT-NNLPGTIVVSRDG-STVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDP 269 (331)
T ss_dssp EEEECSST---------TSCEEEEEEEC-SSCCCCEEECTTS-SEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCC
T ss_pred EEEECCCC---------cccceeeeccC-CCCCceEEECCCC-CEEEEEEcCCCEEEEEECCCCceeeecccccccccCC
Confidence 99999876 43 445543 4667899999999 6554 444578899999998875333322211 2
Q ss_pred ce---eEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 306 GA---VFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 306 ~~---v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
.. ...++|+|+++++++++..++.|.+||+.+..
T Consensus 270 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 270 RPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 22 24589999999877777778899999997644
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=7.9e-26 Score=210.36 Aligned_cols=294 Identities=9% Similarity=0.084 Sum_probs=200.9
Q ss_pred CcccCCCcEEEEEEe-cCCCceEEEEEEeccCCCCCceEeeceeecC-------Cccc----cee--eecCCccccCCCc
Q 018293 1 MTINPNDAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHHHIIIP-------AFPL----CMA--WLDCPLKDREKGN 66 (358)
Q Consensus 1 l~~~p~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~----~~~--~~~~~~~~s~~~~ 66 (358)
++|+|+|+.|+++.. +++.....+++|+...+....+...+..... .... .+. .-..+++|||||+
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 368999999999976 4433456899999877533333322211100 0000 000 0012456699999
Q ss_pred eEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCe
Q 018293 67 FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ 146 (358)
Q Consensus 67 ~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 146 (358)
+|++++. +.|++||+.++... ....+..|...+.+++|+|+ +++|+.++ ++.
T Consensus 122 ~l~~~~~-~~i~~~d~~~~~~~-------------------------~~~~l~~~~~~~~~~~~SPD-G~~la~~~-~~~ 173 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQEGKA-------------------------AVRQLTHGEGFATDAKLSPK-GGFVSFIR-GRN 173 (741)
T ss_dssp EEEEEET-TEEEEEESSSCSTT-------------------------SCCBCCCSSSCEEEEEECTT-SSEEEEEE-TTE
T ss_pred EEEEEeC-CcEEEEECCCCCcc-------------------------eEEEcccCCcccccccCCCC-CCEEEEEe-CCc
Confidence 9999886 99999999764200 01123457788999999999 56787776 569
Q ss_pred EEEEECCCCceeeeecccccc----------------eeeEEEcCCCCcEEEEEeCCC----------------------
Q 018293 147 VKIWDVAAGKCNLTLEHHTDK----------------VQAVAWNHHSPQILLSGSFDR---------------------- 188 (358)
Q Consensus 147 v~iwd~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~~l~~~~~dg---------------------- 188 (358)
|.+||+.+++.......+... +.++.|+|+| +.|++++.|+
T Consensus 174 i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 174 LWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred EEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 999999988766554433332 4789999999 7777776655
Q ss_pred -----------cEEEEEccc-CCCcccee--eecCCeeeEEEcCCCCCeEEEEec-----CCeEEEEEcccCCCCCCCCC
Q 018293 189 -----------SVVMKDARI-STHSGFKW--AVAADVESLAWDPHAEHSFVVSLE-----DGTIKGFDIRTAKSDPDSTS 249 (358)
Q Consensus 189 -----------~i~i~d~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~-----dg~i~i~d~~~~~~~~~~~~ 249 (358)
.|.+||+.+ ++...... .+...+..++| |++. .++++.. +..|++||+.++
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~-~l~~~~~~~~~~~~~i~~~d~~~g-------- 322 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQ-HLSFQRQSRDQKKLDLVEVTLASN-------- 322 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETT-EEEEEEEETTSSEEEEEEEETTTC--------
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCC-EEEEEEecccCCeEEEEEEECCCC--------
Confidence 788899987 66443222 25567899999 9765 5554432 568999999876
Q ss_pred CCccEEEeecCC----ceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEE-EEcCCCCeEEEEE
Q 018293 250 QQSSFTLHAHDK----AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV-AFSEDSPFVLAIG 324 (358)
Q Consensus 250 ~~~~~~~~~~~~----~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~~~ 324 (358)
.....+..+.. .+..++|+|+| +++++++.||.+++|.+..... ...+..+...+..+ .|+|+++.+++++
T Consensus 323 -~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~~~~~~--~~~l~~~~~~v~~~~~~s~dg~~l~~~~ 398 (741)
T 2ecf_A 323 -QQRVLAHETSPTWVPLHNSLRFLDDG-SILWSSERTGFQHLYRIDSKGK--AAALTHGNWSVDELLAVDEKAGLAYFRA 398 (741)
T ss_dssp -CEEEEEEEECSSCCCCCSCCEECTTS-CEEEEECTTSSCEEEEECSSSC--EEESCCSSSCEEEEEEEETTTTEEEEEE
T ss_pred -ceEEEEEcCCCCcCCcCCceEECCCC-eEEEEecCCCccEEEEEcCCCC--eeeeeecceEEEeEeEEeCCCCEEEEEE
Confidence 44444444433 45689999999 6889999999888887763322 45566777778887 5999999766777
Q ss_pred ccCC--eEEEEEccC
Q 018293 325 GSKG--KLEIWDTLS 337 (358)
Q Consensus 325 ~~dg--~i~vw~~~~ 337 (358)
+.++ .+++|++..
T Consensus 399 ~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 399 GIESARESQIYAVPL 413 (741)
T ss_dssp CSSCTTCBEEEEEET
T ss_pred eCCCCceEEEEEEEc
Confidence 7776 899999874
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.4e-24 Score=187.79 Aligned_cols=253 Identities=15% Similarity=0.061 Sum_probs=179.3
Q ss_pred CcEEEEEEecC-CCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCC---eEEEEEc
Q 018293 7 DAVIVCARNED-DVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP---AIEIWDL 82 (358)
Q Consensus 7 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg---~i~vw~~ 82 (358)
+..++.+..++ +...-.+++|+.... ....+..| ...+.++.| ||+|++|++++.++ .|++||+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~----~~~v~~~~~-------Spdg~~la~~s~~~~~~~i~~~d~ 210 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRS----PQPLMSPAW-------SPDGSKLAYVTFESGRSALVIQTL 210 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEE----SSCEEEEEE-------CTTSSEEEEEECTTSSCEEEEEET
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCC----CCcceeeEE-------cCCCCEEEEEEecCCCcEEEEEEC
Confidence 55555554442 111257888887653 23333333 223334544 99999999998875 9999999
Q ss_pred ccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCe--EEEEECCCCceeee
Q 018293 83 DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ--VKIWDVAAGKCNLT 160 (358)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~--v~iwd~~~~~~~~~ 160 (358)
.+++.. .+..|...+.+++|+|++..++++++.++. |.+||+.+++. ..
T Consensus 211 ~tg~~~----------------------------~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~ 261 (415)
T 2hqs_A 211 ANGAVR----------------------------QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQ 261 (415)
T ss_dssp TTCCEE----------------------------EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EE
T ss_pred CCCcEE----------------------------EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-Ee
Confidence 764321 223577889999999995434447776655 99999998875 56
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeC-CC--cEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecC---CeEE
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSF-DR--SVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLED---GTIK 234 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d---g~i~ 234 (358)
+..|...+.+++|+|++ +.|++++. ++ .|.+||+.+++... ...+...+.+++|+|++. ++++++.+ ..|+
T Consensus 262 l~~~~~~~~~~~~spdg-~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDS-QNLAFTSDQAGRPQVYKVNINGGAPQR-ITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIA 338 (415)
T ss_dssp CCCCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSSCCEE-CCCSSSEEEEEEECTTSS-EEEEEEECSSCEEEE
T ss_pred CcCCCCcccceEECCCC-CEEEEEECCCCCcEEEEEECCCCCEEE-EecCCCcccCeEECCCCC-EEEEEECcCCceEEE
Confidence 66788899999999999 66766665 55 57777887765432 334556788999999765 56655543 5899
Q ss_pred EEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC---cEEEEecCCCCceeeEecCCCCceeEEE
Q 018293 235 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---MVKLWDLSNNQPSCIASRNPKAGAVFSV 311 (358)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~v~~~ 311 (358)
+||+.++ .. ..+..+. .+.+++|+|++ ++|++++.++ .|++||+..+. ...+..|.+.|.++
T Consensus 339 ~~d~~~~---------~~-~~l~~~~-~~~~~~~spdg-~~l~~~s~~~~~~~l~~~d~~g~~---~~~l~~~~~~v~~~ 403 (415)
T 2hqs_A 339 KQDLATG---------GV-QVLSSTF-LDETPSLAPNG-TMVIYSSSQGMGSVLNLVSTDGRF---KARLPATDGQVKFP 403 (415)
T ss_dssp EEETTTC---------CE-EECCCSS-SCEEEEECTTS-SEEEEEEEETTEEEEEEEETTSCC---EEECCCSSSEEEEE
T ss_pred EEECCCC---------CE-EEecCCC-CcCCeEEcCCC-CEEEEEEcCCCccEEEEEECCCCc---EEEeeCCCCCCcCC
Confidence 9999875 32 3444454 78999999999 7777777666 79999997654 56778899999999
Q ss_pred EEcCCCC
Q 018293 312 AFSEDSP 318 (358)
Q Consensus 312 ~~~~~~~ 318 (358)
+|+|...
T Consensus 404 ~~~~~~~ 410 (415)
T 2hqs_A 404 AWSPYLH 410 (415)
T ss_dssp EECCCCC
T ss_pred ccccccc
Confidence 9999754
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=5.9e-24 Score=179.86 Aligned_cols=289 Identities=10% Similarity=0.088 Sum_probs=181.4
Q ss_pred EEEEEEec-CCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCC---CCeEEEEEccc
Q 018293 9 VIVCARNE-DDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM---EPAIEIWDLDV 84 (358)
Q Consensus 9 ~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~---dg~i~vw~~~~ 84 (358)
.+++|... +....+.+|.++...+ .+...........|..+ +|+|+|+ |++++. ++.|++|++.+
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg---~~~~~~~~~~~~~p~~~-------a~spdg~-l~~~~~~~~~~~v~~~~~~~ 72 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAK---TLTNDGLLAATQNPTYL-------ALSAKDC-LYSVDKEDDEGGIAAWQIDG 72 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTT---EEEEEEEEEECSCCCCE-------EECTTCE-EEEEEEETTEEEEEEEEEET
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCC---eEEEeeeeeccCCcceE-------EEccCCe-EEEEEecCCCceEEEEEecC
Confidence 34555332 2235677778877654 22221111122333333 4499999 554443 68999999964
Q ss_pred ccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE-cCCeEEEEECCC-C--ceeee
Q 018293 85 IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-ADKQVKIWDVAA-G--KCNLT 160 (358)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~-~--~~~~~ 160 (358)
+... ....+..+...+..++|+|+ +++|++++ .++.|.+|++.. + +.+..
T Consensus 73 g~~~-------------------------~~~~~~~~~~~p~~~a~spd-g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~ 126 (347)
T 3hfq_A 73 QTAH-------------------------KLNTVVAPGTPPAYVAVDEA-RQLVYSANYHKGTAEVMKIAADGALTLTDT 126 (347)
T ss_dssp TEEE-------------------------EEEEEEEESCCCSEEEEETT-TTEEEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred CcEE-------------------------EeeeeecCCCCCEEEEECCC-CCEEEEEeCCCCEEEEEEeCCCCCeeecce
Confidence 3211 11122235677889999999 55666666 789999999963 3 22333
Q ss_pred ecc---------cccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee----eecCCeeeEEEcCCCCCeEEEE
Q 018293 161 LEH---------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW----AVAADVESLAWDPHAEHSFVVS 227 (358)
Q Consensus 161 ~~~---------~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~ 227 (358)
+.. ....+.+++|+|++ +++++...++.|.+||+.......... .....+..++|+|++..+++++
T Consensus 127 ~~~~~~~p~~~~~~~~~~~~~~spdg-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~ 205 (347)
T 3hfq_A 127 VQHSGHGPRPEQDGSHIHYTDLTPDN-RLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAG 205 (347)
T ss_dssp EECCCCCSSTTCSSCCEEEEEECTTS-CEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred eecCCCCCCccccCCCceEEEECCCC-cEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEe
Confidence 321 12247889999999 577777778999999998322221111 1223577899999766456667
Q ss_pred ecCCeEEEEEcccCCCCCCCCCCCccEEEeecC------CceeEEEecCCCCcEEEEEeCCCcEEEEecCC-CCceeeEe
Q 018293 228 LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD------KAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIAS 300 (358)
Q Consensus 228 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~------~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~ 300 (358)
..++.+.+|++...... ......+.... ..+..++|+|+|..++++...++.|.+|++.. +....+..
T Consensus 206 ~~~~~v~v~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 206 ELSSQIASLKYDTQTGA-----FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp TTTTEEEEEEEETTTTE-----EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred CCCCEEEEEEecCCCCc-----eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence 78899999999852110 01122222222 34788999999933446667789999999973 23334445
Q ss_pred cCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEc--cCCCc
Q 018293 301 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT--LSDAG 340 (358)
Q Consensus 301 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~--~~~~~ 340 (358)
...+...+..++|+|+|+++++++..++.|.+|++ .+++.
T Consensus 281 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 281 ISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 55555668899999999976665556699999955 45553
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=2.1e-24 Score=199.68 Aligned_cols=291 Identities=13% Similarity=0.078 Sum_probs=191.6
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+ +.++++ .++ .+++|+...+....+..+ ...+.+ ++|||||++|+++ .++.|++|
T Consensus 87 ~~~spd-~~~~~~-~~~-----~i~~~d~~~~~~~~l~~~-----~~~~~~-------~~~SpdG~~la~~-~~~~i~v~ 146 (706)
T 2z3z_A 87 TLDAGR-GLVVLF-TQG-----GLVGFDMLARKVTYLFDT-----NEETAS-------LDFSPVGDRVAYV-RNHNLYIA 146 (706)
T ss_dssp EEETTT-TEEEEE-ETT-----EEEEEETTTTEEEEEECC-----TTCCTT-------CEECTTSSEEEEE-ETTEEEEE
T ss_pred EEECCC-CeEEEE-ECC-----EEEEEECCCCceEEccCC-----cccccC-------CcCCCCCCEEEEE-ECCeEEEE
Confidence 368999 666666 344 889999876421111111 222233 4459999999995 68999999
Q ss_pred Eccc-----ccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE-------------
Q 018293 81 DLDV-----IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS------------- 142 (358)
Q Consensus 81 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------------- 142 (358)
++.+ ++.... ...... ....... ....+...+.++.|+|+ +++|++++
T Consensus 147 ~~~~~~~~~g~~~~~---~~~~~~---------~~~~g~~-~~~ee~~~~~~~~~SpD-g~~la~~~~d~~~~~~~~~~~ 212 (706)
T 2z3z_A 147 RGGKLGEGMSRAIAV---TIDGTE---------TLVYGQA-VHQREFGIEKGTFWSPK-GSCLAFYRMDQSMVKPTPIVD 212 (706)
T ss_dssp ECBCTTSCCCCCEES---CSCCBT---------TEEESSC-CGGGCTTCCCSEEECTT-SSEEEEEEEECTTSCCEEEEE
T ss_pred ecCcccccCCCcEEe---ccCCCC---------CeEcccc-hhhhhcCCCceEEECCC-CCEEEEEEECCCCCceEEeec
Confidence 9986 433211 000000 0000000 11122334689999999 56888877
Q ss_pred --------------------cCCeEEEEECCCCceeeeec--ccccceeeEEEcCCCCcEEEEEeCCC-----cEEEEEc
Q 018293 143 --------------------ADKQVKIWDVAAGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDR-----SVVMKDA 195 (358)
Q Consensus 143 --------------------~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~ 195 (358)
.+..|.+||+.+++...... .+...+.+++|+|++ +.+++++.++ .|.+||+
T Consensus 213 ~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 213 YHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE-NILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp CCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS-SEEEEEEECTTSCEEEEEEEET
T ss_pred cCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC-CEEEEEEeCCCCCeeEEEEEEC
Confidence 34679999999887654432 466789999999999 7777776665 8999999
Q ss_pred ccCCCccceeee--cC---CeeeEEEcC--CCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeE-EE
Q 018293 196 RISTHSGFKWAV--AA---DVESLAWDP--HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT-IS 267 (358)
Q Consensus 196 ~~~~~~~~~~~~--~~---~i~~~~~~~--~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~-i~ 267 (358)
.+++........ .. .+..++|+| ++. +++++..+|.+++|++... ......+..+...+.. ++
T Consensus 292 ~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~--------~~~~~~l~~~~~~v~~~~~ 362 (706)
T 2z3z_A 292 ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTT--------GRLIRQVTKGEWEVTNFAG 362 (706)
T ss_dssp TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETT--------SCEEEECCCSSSCEEEEEE
T ss_pred CCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECC--------CCEEEecCCCCeEEEeeeE
Confidence 887333222221 11 246789999 765 8888889999999988732 1455666677777876 79
Q ss_pred ecCCCCcEEEEEeCCC----cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccC---CeEEEEEccCCC
Q 018293 268 YNPLVPNLLATGSTDK----MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEIWDTLSDA 339 (358)
Q Consensus 268 ~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~vw~~~~~~ 339 (358)
|+|++..+++++..++ .|..||+.+++. ..+. +...+.+++|+|+|++++++++.+ +.|++||+.+++
T Consensus 363 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~---~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 363 FDPKGTRLYFESTEASPLERHFYCIDIKGGKT---KDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ECTTSSEEEEEESSSCTTCBEEEEEETTCCCC---EESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EcCCCCEEEEEecCCCCceEEEEEEEcCCCCc---eecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 9999844455555555 677777777652 2232 556789999999999755554443 569999998876
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=3.3e-24 Score=181.70 Aligned_cols=280 Identities=11% Similarity=0.040 Sum_probs=189.3
Q ss_pred CcccCCCcEEEEEEecCC--CceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceE-EecCCCCeE
Q 018293 1 MTINPNDAVIVCARNEDD--VSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM-AVGSMEPAI 77 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~i 77 (358)
++++|+++.++++...+. .....+++|+...+.....+ .....+..+ .|+|+|+++ +++..++.|
T Consensus 46 ~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-----~~~~~~~~~-------~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 46 MAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI-----HNDLKPFGA-------TINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp EEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE-----EESSCCCSE-------EEETTTTEEEEEETTTTEE
T ss_pred eEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE-----ecCCCcceE-------EECCCCCEEEEEecCCCEE
Confidence 468999999988864421 01347889988765221111 122233344 448999855 555668999
Q ss_pred EEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE--cCCeEEEEECCCC
Q 018293 78 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS--ADKQVKIWDVAAG 155 (358)
Q Consensus 78 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~ 155 (358)
.+||..+++............ ........+.+++|+|++. ++++++ .++.|.+||+.++
T Consensus 114 ~~~d~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~~~d~~~~ 174 (353)
T 3vgz_A 114 TAIDAKTGEVKGRLVLDDRKR------------------TEEVRPLQPRELVADDATN-TVYISGIGKESVIWVVDGGNI 174 (353)
T ss_dssp EEEETTTCCEEEEEESCCCCC------------------CSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEEEEETTTT
T ss_pred EEEeCCCCeeEEEEecCCCcc------------------ccccCCCCCceEEECCCCC-EEEEEecCCCceEEEEcCCCC
Confidence 999998765443221100000 0000112378899999955 555554 4789999999999
Q ss_pred ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceee----ecCCeeeEEEcCCCCCeEEEEecCC
Q 018293 156 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA----VAADVESLAWDPHAEHSFVVSLEDG 231 (358)
Q Consensus 156 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~dg 231 (358)
+.+..+..+...+.+++|+|++ +.+++++.++.+.+||+.+++....... ....+..++|+|++..++++...++
T Consensus 175 ~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 175 KLKTAIQNTGKMSTGLALDSEG-KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 253 (353)
T ss_dssp EEEEEECCCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS
T ss_pred ceEEEecCCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC
Confidence 9888887566678899999999 7888888999999999988765543322 3445778999997665555555669
Q ss_pred eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEE
Q 018293 232 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV 311 (358)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~ 311 (358)
.|.+||..++ +....+.... ...++|+|++..++++...++.|.+||..+++... .+.. ...+.++
T Consensus 254 ~v~~~d~~~~---------~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~--~~~~-~~~~~~~ 319 (353)
T 3vgz_A 254 EVLVVDTRNG---------NILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK--TFDT-PTHPNSL 319 (353)
T ss_dssp EEEEEETTTC---------CEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE--EEEC-CSEEEEE
T ss_pred EEEEEECCCC---------cEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE--EEec-CCCCCeE
Confidence 9999999876 4455554433 25799999984455555578999999999887433 3332 3468899
Q ss_pred EEcCCCCeEEEEEcc
Q 018293 312 AFSEDSPFVLAIGGS 326 (358)
Q Consensus 312 ~~~~~~~~~l~~~~~ 326 (358)
+|+|+|++++++...
T Consensus 320 ~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECTTSCEEEEEEEC
T ss_pred EEcCCCCEEEEEEcc
Confidence 999999975655443
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=5.8e-25 Score=181.47 Aligned_cols=255 Identities=12% Similarity=0.067 Sum_probs=176.1
Q ss_pred eEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEEccc-ccCcCceeecCCccc
Q 018293 21 HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDV-IDEVQPHVILGGIDE 99 (358)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~~-~~~~~~~~~~~~~~~ 99 (358)
.-.+++|+...+....+..+ ...+.++.| +|+|++|++++ ++.|++||+.+ ++...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~-----~~~v~~~~~-------spdg~~l~~~~-~~~i~~~d~~~~~~~~~---------- 77 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT-----PELFEAPNW-------SPDGKYLLLNS-EGLLYRLSLAGDPSPEK---------- 77 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE-----SSCCEEEEE-------CTTSSEEEEEE-TTEEEEEESSSCCSCEE----------
T ss_pred ceeEEEEeCCCCceeeeccC-----CcceEeeEE-------CCCCCEEEEEc-CCeEEEEeCCCCCCceE----------
Confidence 34788888876532222222 333445555 89999999987 88999999975 43221
Q ss_pred ccccccccCCceeccccccCCC-cccEEEEecCCCCCcEEEEEE--cCCeEEE--EECCCCceeeeecccccceeeEEEc
Q 018293 100 EKKKKKSKKGKKSSIKYKKGSH-TDSVLGLAWNKEFRNILASAS--ADKQVKI--WDVAAGKCNLTLEHHTDKVQAVAWN 174 (358)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~--~dg~v~i--wd~~~~~~~~~~~~~~~~v~~~~~~ 174 (358)
....| ...+.+++|+|+ +++|++++ .++...| |+..+++ ...+..+ ..+..++|+
T Consensus 78 -----------------~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~s 137 (297)
T 2ojh_A 78 -----------------VDTGFATICNNDHGISPD-GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWS 137 (297)
T ss_dssp -----------------CCCTTCCCBCSCCEECTT-SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEEC
T ss_pred -----------------eccccccccccceEECCC-CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEEC
Confidence 11223 467899999999 56888888 3344455 4555554 3444433 348899999
Q ss_pred CCCCcEEEEEeCCCcEEEEEcccCC-CccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCcc
Q 018293 175 HHSPQILLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS 253 (358)
Q Consensus 175 ~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 253 (358)
|++..+++++..++.+.+|++.... .......+...+.+++|+|++..+++++..++.+++|++... ....
T Consensus 138 pdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~--------~~~~ 209 (297)
T 2ojh_A 138 PDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD--------GSSV 209 (297)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT--------SSCE
T ss_pred CCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCC--------CCCc
Confidence 9994444588889999999975432 223234556789999999976544444556899999998743 1455
Q ss_pred EEEeecCCceeEEEecCCCCcEEEEEeCC-----------CcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEE
Q 018293 254 FTLHAHDKAVCTISYNPLVPNLLATGSTD-----------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLA 322 (358)
Q Consensus 254 ~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 322 (358)
..+..|...+.+++|+|++ ++|++++.+ +.|++||+.+++...+.....|...+.+++|+|+++++++
T Consensus 210 ~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 210 ERITDSAYGDWFPHPSPSG-DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp EECCCCSEEEEEEEECTTS-SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred EEEecCCcccCCeEECCCC-CEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEE
Confidence 6677777889999999998 777776655 5699999998876556655567778999999999997444
Q ss_pred EEccC
Q 018293 323 IGGSK 327 (358)
Q Consensus 323 ~~~~d 327 (358)
++..+
T Consensus 289 ~~~~~ 293 (297)
T 2ojh_A 289 VRYFP 293 (297)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 44433
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=6.1e-24 Score=178.54 Aligned_cols=244 Identities=9% Similarity=0.067 Sum_probs=172.2
Q ss_pred ccCCC-ceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 61 DREKG-NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 61 ~s~~~-~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
|.+++ ..+++++.++.|++||..+++..... ..+...+ +++|+|++..+++
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~---------------------------~~~~~~~-~~~~s~dg~~l~~ 56 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQI---------------------------TLGYDFV-DTAITSDCSNVVV 56 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEE---------------------------ECCCCEE-EEEECSSSCEEEE
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeE---------------------------EccCCcc-eEEEcCCCCEEEE
Confidence 34554 45778888999999999865443221 1234556 9999999543444
Q ss_pred EEEcCCeEEEEECCCCce-eeeecccccceeeEEEcCCCCcEEEEEeCCC---cEEEEEcccCCCccceeeecCCeeeEE
Q 018293 140 SASADKQVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDR---SVVMKDARISTHSGFKWAVAADVESLA 215 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~i~~~~ 215 (358)
++..++.|.+||+.+++. ...+..+..+..+++|+|++ ++++++..++ .|.+||+.+++... ..........++
T Consensus 57 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~ 134 (331)
T 3u4y_A 57 TSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFIS-TIPIPYDAVGIA 134 (331)
T ss_dssp EESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEE-EEECCTTEEEEE
T ss_pred EeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEE-EEECCCCccceE
Confidence 555589999999999987 77777666666669999999 7677555553 89999998876654 334456678999
Q ss_pred EcCCCCCeEEEEecCCe-EEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCC
Q 018293 216 WDPHAEHSFVVSLEDGT-IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294 (358)
Q Consensus 216 ~~~~~~~~~~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 294 (358)
|+|++..++++...++. +.+|++....... ...............++|+|++..+++++..++.|.+||+.+++
T Consensus 135 ~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 135 ISPNGNGLILIDRSSANTVRRFKIDADGVLF-----DTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp ECTTSSCEEEEEETTTTEEEEEEECTTCCEE-----EEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred ECCCCCEEEEEecCCCceEEEEEECCCCcEe-----ecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 99987766667677788 9999998541100 00012223345578999999994355566678999999999887
Q ss_pred cee-eEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 295 PSC-IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 295 ~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
... +..+.. ...+..++|+|+|++++++...++.|.+||+.+++.
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 210 NITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred ccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 411 333332 356778999999997677666788999999998776
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=7.6e-24 Score=174.74 Aligned_cols=228 Identities=10% Similarity=0.030 Sum_probs=167.6
Q ss_pred ecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEE
Q 018293 70 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKI 149 (358)
Q Consensus 70 ~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i 149 (358)
.++.|+.|++||+.+++.. .+..|...|.+++|+|+ +++|++++ ++.|.+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~----------------------------~~~~~~~~v~~~~~spd-g~~l~~~~-~~~i~~ 66 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR----------------------------VVWQTPELFEAPNWSPD-GKYLLLNS-EGLLYR 66 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE----------------------------EEEEESSCCEEEEECTT-SSEEEEEE-TTEEEE
T ss_pred CCCcceeEEEEeCCCCcee----------------------------eeccCCcceEeeEECCC-CCEEEEEc-CCeEEE
Confidence 4567899999999754322 22347889999999999 56787776 789999
Q ss_pred EECCC-Cceeeeeccc-ccceeeEEEcCCCCcEEEEEe--CCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEE
Q 018293 150 WDVAA-GKCNLTLEHH-TDKVQAVAWNHHSPQILLSGS--FDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFV 225 (358)
Q Consensus 150 wd~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 225 (358)
||+.+ ++.......+ ...+.+++|+|++ +.+++++ .++...+|.+...............+..++|+|++..+++
T Consensus 67 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 145 (297)
T 2ojh_A 67 LSLAGDPSPEKVDTGFATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTY 145 (297)
T ss_dssp EESSSCCSCEECCCTTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEE
T ss_pred EeCCCCCCceEeccccccccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEE
Confidence 99999 8777666555 3678999999999 7888887 4456666665432222223334445888999997765555
Q ss_pred EEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe-CCCcEEEEecC-CCCceeeEecCC
Q 018293 226 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLS-NNQPSCIASRNP 303 (358)
Q Consensus 226 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~ 303 (358)
++..++.+++|+++... .....+..+...+.+++|+|++ .+|+.++ .++.+++|++. ... ....+..
T Consensus 146 ~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~~~~~~~~--~~~~~~~ 214 (297)
T 2ojh_A 146 CGIRDQVFDIYSMDIDS--------GVETRLTHGEGRNDGPDYSPDG-RWIYFNSSRTGQMQIWRVRVDGS--SVERITD 214 (297)
T ss_dssp EEEETTEEEEEEEETTT--------CCEEECCCSSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSS--CEEECCC
T ss_pred EECCCCceEEEEEECCC--------CcceEcccCCCccccceECCCC-CEEEEEecCCCCccEEEECCCCC--CcEEEec
Confidence 88899999999986431 3345666777889999999998 6555544 68999999986 333 3456677
Q ss_pred CCceeEEEEEcCCCCeEEEEEccC-----------CeEEEEEccCCCc
Q 018293 304 KAGAVFSVAFSEDSPFVLAIGGSK-----------GKLEIWDTLSDAG 340 (358)
Q Consensus 304 ~~~~v~~~~~~~~~~~~l~~~~~d-----------g~i~vw~~~~~~~ 340 (358)
+...+..++|+|++++ |++++.+ +.|++||+.+++.
T Consensus 215 ~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 215 SAYGDWFPHPSPSGDK-VVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CSEEEEEEEECTTSSE-EEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CCcccCCeEECCCCCE-EEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 7788999999999996 5555544 5699999988764
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=2.4e-24 Score=199.83 Aligned_cols=286 Identities=9% Similarity=0.022 Sum_probs=185.8
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCC------
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME------ 74 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d------ 74 (358)
++|+|+|++++. ..++ .+++|+...+....+..++... ...+. +++|||||++|++++.+
T Consensus 22 ~~~spdg~~~~~-~~dg-----~i~~~d~~~g~~~~~~~~~~~~-~~~v~-------~~~~SpDg~~l~~~~~~~~~~~~ 87 (723)
T 1xfd_A 22 AKWISDTEFIYR-EQKG-----TVRLWNVETNTSTVLIEGKKIE-SLRAI-------RYEISPDREYALFSYNVEPIYQH 87 (723)
T ss_dssp CCBSSSSCBCCC-CSSS-----CEEEBCGGGCCCEEEECTTTTT-TTTCS-------EEEECTTSSEEEEEESCCCCSSS
T ss_pred cEEcCCCcEEEE-eCCC-----CEEEEECCCCcEEEEecccccc-ccccc-------eEEECCCCCEEEEEecCccceee
Confidence 478999996654 3443 7888888776443333333210 00122 34559999999998764
Q ss_pred ---CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEE
Q 018293 75 ---PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 151 (358)
Q Consensus 75 ---g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 151 (358)
+.|++||+.+++... .....+|...+..++|+|+ ++.|+.++. +.|++||
T Consensus 88 ~~~~~i~~~d~~~~~~~~-------------------------l~~~~~~~~~~~~~~~SPd-G~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 88 SYTGYYVLSKIPHGDPQS-------------------------LDPPEVSNAKLQYAGWGPK-GQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp CCCSEEEEEESSSCCCEE-------------------------CCCTTCCSCCCSBCCBCSS-TTCEEEEET-TEEEEES
T ss_pred cceeeEEEEECCCCceEe-------------------------ccCCccccccccccEECCC-CCEEEEEEC-CeEEEEE
Confidence 788999998654310 1112346666899999999 567777765 7999999
Q ss_pred CCCCceeeeecccccce------------------eeEEEcCCCCcEEEEEeCCC-------------------------
Q 018293 152 VAAGKCNLTLEHHTDKV------------------QAVAWNHHSPQILLSGSFDR------------------------- 188 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~l~~~~~dg------------------------- 188 (358)
+.+++.......+...+ .+++|+|+| +.|++++.++
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 99887766555443333 789999999 7777776442
Q ss_pred ---------cEEEEEcccCCCccceeee------cCCeeeEEEcCCCCCeEEEEec----CCeEEEEEcccCCCCCCCCC
Q 018293 189 ---------SVVMKDARISTHSGFKWAV------AADVESLAWDPHAEHSFVVSLE----DGTIKGFDIRTAKSDPDSTS 249 (358)
Q Consensus 189 ---------~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~----dg~i~i~d~~~~~~~~~~~~ 249 (358)
.|++||+.+++.......+ ...+..++|+|++. ++++... +..|++||+.++
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g-------- 290 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTG-------- 290 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTC--------
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCC--------
Confidence 7999999887643322222 45688999999765 6655543 357999999876
Q ss_pred CCccEEEee-cCCce----eEEEecCCCCcEEEE-EeCCC------cEEEEe-cCCCCceeeEecCCCCceeEE-EEEcC
Q 018293 250 QQSSFTLHA-HDKAV----CTISYNPLVPNLLAT-GSTDK------MVKLWD-LSNNQPSCIASRNPKAGAVFS-VAFSE 315 (358)
Q Consensus 250 ~~~~~~~~~-~~~~i----~~i~~~~~~~~~l~~-~~~dg------~i~i~d-~~~~~~~~~~~~~~~~~~v~~-~~~~~ 315 (358)
+....+.. +...+ ..++|+|+|..++++ +..++ .|.+|| ..+++..+...+..+...+.. ++|+|
T Consensus 291 -~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~sp 369 (723)
T 1xfd_A 291 -VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDE 369 (723)
T ss_dssp -CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEET
T ss_pred -cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcC
Confidence 43333333 33333 378999999555554 55677 577777 344431012233333334444 69999
Q ss_pred CCCeEEEEEccC--CeEEEEEccCC
Q 018293 316 DSPFVLAIGGSK--GKLEIWDTLSD 338 (358)
Q Consensus 316 ~~~~~l~~~~~d--g~i~vw~~~~~ 338 (358)
+|+.+++++..+ +.+++|++...
T Consensus 370 dg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 370 KGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp TTTEEEEEESSSCTTCCEEEEECSS
T ss_pred CCCEEEEEEcCCCCcceEEEEEeCC
Confidence 999755555555 88999998653
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=4e-24 Score=181.17 Aligned_cols=242 Identities=12% Similarity=0.082 Sum_probs=177.7
Q ss_pred ccccCCCceEEecCC-------CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecC
Q 018293 59 LKDREKGNFMAVGSM-------EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN 131 (358)
Q Consensus 59 ~~~s~~~~~l~~g~~-------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 131 (358)
++|+|+++++++++. ++.|.+||..+++...... ....+..++|+
T Consensus 46 ~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~----------------------------~~~~~~~~~~s 97 (353)
T 3vgz_A 46 MAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH----------------------------NDLKPFGATIN 97 (353)
T ss_dssp EEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE----------------------------ESSCCCSEEEE
T ss_pred eEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe----------------------------cCCCcceEEEC
Confidence 445899998887764 5689999998655433211 12346788999
Q ss_pred CCCCcEEEEEEcCCeEEEEECCCCceeeeeccccc---------ceeeEEEcCCCCcEEEEEe--CCCcEEEEEcccCCC
Q 018293 132 KEFRNILASASADKQVKIWDVAAGKCNLTLEHHTD---------KVQAVAWNHHSPQILLSGS--FDRSVVMKDARISTH 200 (358)
Q Consensus 132 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~ 200 (358)
|++..++++...++.|.+||.++++.+..+..+.. .+.+++|+|++ +.+++++ .++.|.+||..+.+.
T Consensus 98 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 98 NTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGNIKL 176 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTTTEE
T ss_pred CCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCCCce
Confidence 99655666667789999999999998887765432 26889999999 5555544 578899999988766
Q ss_pred ccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee----cCCceeEEEecCCCCcEE
Q 018293 201 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA----HDKAVCTISYNPLVPNLL 276 (358)
Q Consensus 201 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~----~~~~i~~i~~~~~~~~~l 276 (358)
..........+..++|+|++ ..+++++.++.|.+||..++ +....+.. +...+.+++|+|++..++
T Consensus 177 ~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 177 KTAIQNTGKMSTGLALDSEG-KRLYTTNADGELITIDTADN---------KILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp EEEECCCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTT---------EEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred EEEecCCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCC---------eEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 55333245568899999965 47888888999999999876 44444443 455678899999984344
Q ss_pred EEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 277 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 277 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
++...++.|.+||..+++........ . ...++|+|++++++++...++.|.+||+.+++.+..
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~~~--~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVAAP--E--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECS--S--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcC--C--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence 44445699999999988754333322 1 246899999997777777899999999998876654
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.9e-23 Score=175.73 Aligned_cols=278 Identities=15% Similarity=0.154 Sum_probs=187.5
Q ss_pred cEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCC---cccceeeecCCccccCCCceE-EecCCCCeEEEEEcc
Q 018293 8 AVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPA---FPLCMAWLDCPLKDREKGNFM-AVGSMEPAIEIWDLD 83 (358)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~i~vw~~~ 83 (358)
++++++..++ .+++|+...+ ... ....... .+..+ +|+|+|+++ +++..++.|.+||+.
T Consensus 2 ~~~v~~~~~~-----~v~~~d~~~~---~~~--~~~~~~~~~~~~~~~-------~~s~dg~~l~v~~~~~~~v~~~d~~ 64 (337)
T 1pby_B 2 DYILAPARPD-----KLVVIDTEKM---AVD--KVITIADAGPTPMVP-------MVAPGGRIAYATVNKSESLVKIDLV 64 (337)
T ss_dssp EEEEEEETTT-----EEEEEETTTT---EEE--EEEECTTCTTCCCCE-------EECTTSSEEEEEETTTTEEEEEETT
T ss_pred cEEEEcCCCC-----eEEEEECCCC---cEE--EEEEcCCCCCCccce-------EEcCCCCEEEEEeCCCCeEEEEECC
Confidence 4677776666 8899998764 221 1112222 23344 448999765 566678999999997
Q ss_pred cccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE------------cCCeEEEEE
Q 018293 84 VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS------------ADKQVKIWD 151 (358)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------------~dg~v~iwd 151 (358)
+++........ ....|...+.+++|+|+ +++++++. .++.|.+||
T Consensus 65 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d 121 (337)
T 1pby_B 65 TGETLGRIDLS----------------------TPEERVKSLFGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYD 121 (337)
T ss_dssp TCCEEEEEECC----------------------BTTEEEECTTCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred CCCeEeeEEcC----------------------CcccccccccceEECCC-CCEEEEEecccccccccccccCceEEEEE
Confidence 65543221110 00012335678999999 55677665 579999999
Q ss_pred CCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCC
Q 018293 152 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 231 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg 231 (358)
+.+++.+..+.. ...+.+++|+|++ +.++++ ++.|.+||+.+++...... .......+.|+|++..+++++..++
T Consensus 122 ~~~~~~~~~~~~-~~~~~~~~~s~dg-~~l~~~--~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~ 196 (337)
T 1pby_B 122 AETLSRRKAFEA-PRQITMLAWARDG-SKLYGL--GRDLHVMDPEAGTLVEDKP-IQSWEAETYAQPDVLAVWNQHESSG 196 (337)
T ss_dssp TTTTEEEEEEEC-CSSCCCEEECTTS-SCEEEE--SSSEEEEETTTTEEEEEEC-STTTTTTTBCCCBCCCCCCCCTTTT
T ss_pred CCCCcEEEEEeC-CCCcceeEECCCC-CEEEEe--CCeEEEEECCCCcEeeeee-ccccCCCceeCCCccEEeeeccCCC
Confidence 999888777764 4568889999999 656666 6899999998776543221 1111123477887664444443333
Q ss_pred -----------------------eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEE
Q 018293 232 -----------------------TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 288 (358)
Q Consensus 232 -----------------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 288 (358)
.|.+||+.+++ .....+..+...+.+++|+|++ ++++++ ++.|.+|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~ 265 (337)
T 1pby_B 197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGE--------MAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESF 265 (337)
T ss_dssp EEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC--------EEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEE
T ss_pred ceeeeeeccccccccccccccccceEEEeCCCCC--------ceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEE
Confidence 46899998762 1134455666778899999998 777777 6899999
Q ss_pred ecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 289 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
|+.+++.... +.. ...+.+++|+|+|++ |++++.++.|.+||+.+++.+...-
T Consensus 266 d~~~~~~~~~--~~~-~~~~~~~~~s~dg~~-l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 266 DLEKNASIKR--VPL-PHSYYSVNVSTDGST-VWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp ETTTTEEEEE--EEC-SSCCCEEEECTTSCE-EEEESBSSEEEEEETTTCCEEEEEE
T ss_pred ECCCCcCcce--ecC-CCceeeEEECCCCCE-EEEEcCCCcEEEEECcCCcEEEEEE
Confidence 9998874333 222 245788999999996 5567889999999999988776543
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=2.5e-23 Score=180.43 Aligned_cols=210 Identities=12% Similarity=0.122 Sum_probs=142.1
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCC-------CC-CceEee---ceeecCCcccceeeecCCccccCCCceEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDG-------GD-PNLYVH---HHIIIPAFPLCMAWLDCPLKDREKGNFMA 69 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 69 (358)
|+++|++.+++++..+ .+.+|+...- .. ..+... .....+..+.+++| +|+|++|+
T Consensus 42 lavs~~~~~l~~~~~d------gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-------spdg~~la 108 (434)
T 2oit_A 42 LAVSNKYGLVFAGGAS------GLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLAL-------SCDNLTLS 108 (434)
T ss_dssp EEEETTTTEEEEEETT------EEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEE-------CTTSCEEE
T ss_pred EEEecCCCEEEEECCC------EEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEE-------cCCCCEEE
Confidence 4678888998888443 3555554211 00 011110 01112333445555 89999999
Q ss_pred ----ecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCC
Q 018293 70 ----VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK 145 (358)
Q Consensus 70 ----~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 145 (358)
+|+.|+.|+|||+.+...... ...+.......+.+|...|.+++|+|+++.+|++++.||
T Consensus 109 v~~~sgs~d~~v~iwd~~~~~~~~~----------------~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 109 ACMMSSEYGSIIAFFDVRTFSNEAK----------------QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp EEEEETTTEEEEEEEEHHHHHCTTC----------------SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred EEEeccCCCceEEEEEccccccCCc----------------CCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 899999999999976411000 000011123355679999999999998678999999999
Q ss_pred eEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceee-------ecCCeeeEEEcC
Q 018293 146 QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA-------VAADVESLAWDP 218 (358)
Q Consensus 146 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~i~~~~~~~ 218 (358)
+|++||++++.......+|...|.+++|+|++ .+|++|+.||.|++||++ ++....... +...+.+++|++
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTS-SCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec
Confidence 99999999987776677788999999999998 899999999999999998 322221111 123789999998
Q ss_pred CCCCeEEEEecCC------eEEEEEcccC
Q 018293 219 HAEHSFVVSLEDG------TIKGFDIRTA 241 (358)
Q Consensus 219 ~~~~~~~~~~~dg------~i~i~d~~~~ 241 (358)
++..+++....+| .+++|++++.
T Consensus 251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 251 TYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CceEEEEEccCCCccCCCCceEEEEeccC
Confidence 5432222344443 3899999875
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=3.1e-22 Score=170.16 Aligned_cols=289 Identities=10% Similarity=0.107 Sum_probs=179.1
Q ss_pred cCCCcEEEEEEecC-CCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCC----CeEE
Q 018293 4 NPNDAVIVCARNED-DVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME----PAIE 78 (358)
Q Consensus 4 ~p~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d----g~i~ 78 (358)
.+....+++|.... +...+.+|.++...+ .+...... ....|..+ +|+|+|++|++++.+ +.|.
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g---~~~~~~~~-~~~~p~~l-------~~spdg~~l~~~~~~~~~~~~v~ 78 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETG---ESLPLSDA-EVANPSYL-------IPSADGKFVYSVNEFSKDQAAVS 78 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTC---CEEEEEEE-ECSCCCSE-------EECTTSSEEEEEECCSSTTCEEE
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCC---CEEEeecc-cCCCCceE-------EECCCCCEEEEEEccCCCCCcEE
Confidence 34556667775432 235666676776654 22221111 22233333 449999999988875 8999
Q ss_pred EEEcccc-cCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE-cCCeEEEEECCCCc
Q 018293 79 IWDLDVI-DEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-ADKQVKIWDVAAGK 156 (358)
Q Consensus 79 vw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~ 156 (358)
+|+++.. .... .......+......+++ + +++|++++ .++.|.+|++....
T Consensus 79 ~~~~~~~~g~~~------------------------~~~~~~~~~~~p~~~~~--d-g~~l~~~~~~~~~v~~~~~~~~g 131 (361)
T 3scy_A 79 AFAFDKEKGTLH------------------------LLNTQKTMGADPCYLTT--N-GKNIVTANYSGGSITVFPIGQDG 131 (361)
T ss_dssp EEEEETTTTEEE------------------------EEEEEECSSSCEEEEEE--C-SSEEEEEETTTTEEEEEEBCTTS
T ss_pred EEEEeCCCCcEE------------------------EeeEeccCCCCcEEEEE--C-CCEEEEEECCCCEEEEEEeCCCC
Confidence 9998742 1111 11112234456777787 5 44555554 68899999997543
Q ss_pred eeeeec--------------ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC------c-------cceeeecC
Q 018293 157 CNLTLE--------------HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH------S-------GFKWAVAA 209 (358)
Q Consensus 157 ~~~~~~--------------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~-------~~~~~~~~ 209 (358)
.+..+. .+...+.+++|+|++..++++...++.+.+|++..... . ........
T Consensus 132 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 211 (361)
T 3scy_A 132 ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS 211 (361)
T ss_dssp CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC
T ss_pred cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC
Confidence 332211 11233578999999933445555689999999876542 1 11122345
Q ss_pred CeeeEEEcCCCCCeEEEEe-cCCeEEEEEcccCCCCCCCCCCCccEEEe---ecCCceeEEEecCCCCcEEEEEeC--CC
Q 018293 210 DVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLH---AHDKAVCTISYNPLVPNLLATGST--DK 283 (358)
Q Consensus 210 ~i~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---~~~~~i~~i~~~~~~~~~l~~~~~--dg 283 (358)
.+..++|+|++. ++++++ .++.|.+||+.++.. .....+. .+......++|+|++ ++|+++.. ++
T Consensus 212 ~~~~~~~spdg~-~l~v~~~~~~~v~v~~~~~g~~-------~~~~~~~~~~~~~~~~~~i~~spdg-~~l~v~~~~~~~ 282 (361)
T 3scy_A 212 GPRHLIFNSDGK-FAYLINEIGGTVIAFRYADGML-------DEIQTVAADTVNAQGSGDIHLSPDG-KYLYASNRLKAD 282 (361)
T ss_dssp CEEEEEECTTSS-EEEEEETTTCEEEEEEEETTEE-------EEEEEEESCSSCCCCEEEEEECTTS-SEEEEEECSSSC
T ss_pred CCeEEEEcCCCC-EEEEEcCCCCeEEEEEecCCce-------EEeEEEecCCCCCCCcccEEECCCC-CEEEEECCCCCC
Confidence 678999999765 555544 789999999985521 1222222 223446799999999 66655554 58
Q ss_pred cEEEEecC--CCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEcc--CCCc
Q 018293 284 MVKLWDLS--NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL--SDAG 340 (358)
Q Consensus 284 ~i~i~d~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~--~~~~ 340 (358)
.|.+|++. +++...+..... ...+..++|+|+|+++++++..++.|.+|++. +++.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 89999996 444333443333 45678899999999766655578999997654 5543
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.1e-23 Score=182.67 Aligned_cols=252 Identities=15% Similarity=0.171 Sum_probs=170.7
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
++++++.++++++.++ ++||+......... ... . ..............|...|.+++|+|+ +++|+
T Consensus 43 avs~~~~~l~~~~~dg-v~v~~~~~~~~~~~---~~~--~-------~~~~~~~~~~~~~~~~~~v~~l~~spd-g~~la 108 (434)
T 2oit_A 43 AVSNKYGLVFAGGASG-LQIFPTKNLLIQNK---PGD--D-------PNKIVDKVQGLLVPMKFPIHHLALSCD-NLTLS 108 (434)
T ss_dssp EEETTTTEEEEEETTE-EEEEEHHHHCCCCC---TTC--C-------TTCEEECCCCEEECCSSCEEEEEECTT-SCEEE
T ss_pred EEecCCCEEEEECCCE-EEEEEchHhhhhcc---ccc--C-------cccccccCccccccCCCcccEEEEcCC-CCEEE
Confidence 3488999999999888 89988754321100 000 0 000000000111236778999999999 56777
Q ss_pred ----EEEcCCeEEEEECCCC--------ce---eeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce
Q 018293 140 ----SASADKQVKIWDVAAG--------KC---NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 204 (358)
Q Consensus 140 ----s~~~dg~v~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 204 (358)
+|+.|+.|++||+.++ +. ...+.+|...|.+++|+|+++.+|++++.||+|++||++++......
T Consensus 109 v~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~ 188 (434)
T 2oit_A 109 ACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT 188 (434)
T ss_dssp EEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE
T ss_pred EEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec
Confidence 7888999999998754 11 45566799999999999985589999999999999999987554444
Q ss_pred eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee-------cCCceeEEEecCCCCcEEE
Q 018293 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-------HDKAVCTISYNPLVPNLLA 277 (358)
Q Consensus 205 ~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~i~~~~~~~~~l~ 277 (358)
..|...+.+++|+|+ +.++++|+.||.|++||.+ + .....+.. |...+.+++|++++ .+++
T Consensus 189 ~~~~~~v~~v~wspd-g~~lasgs~dg~v~iwd~~-~---------~~~~~~~~~~~~~~~~~~~v~~v~w~~~~-~~l~ 256 (434)
T 2oit_A 189 LPSTVAVTSVCWSPK-GKQLAVGKQNGTVVQYLPT-L---------QEKKVIPCPPFYESDHPVRVLDVLWIGTY-VFAI 256 (434)
T ss_dssp ECGGGCEEEEEECTT-SSCEEEEETTSCEEEECTT-C---------CEEEEECCCTTCCTTSCEEEEEEEEEETT-EEEE
T ss_pred cCCCCceeEEEEcCC-CCEEEEEcCCCcEEEEccC-C---------cccccccCCcccCCCCceeEEEEEEecCc-eEEE
Confidence 557789999999996 5689999999999999998 3 22233322 23479999999977 5554
Q ss_pred E-EeCCCc------EEEEecCCCC---ceeeEecC-------CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 278 T-GSTDKM------VKLWDLSNNQ---PSCIASRN-------PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 278 ~-~~~dg~------i~i~d~~~~~---~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
+ ...||. +++|+++..+ +.....+. ....+-..+...++.+.++++.+..+.|.+.....
T Consensus 257 ~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 257 VYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp EEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred EEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 3 444433 8999998653 11112211 22233334455577776677777777777777543
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=5.6e-23 Score=191.20 Aligned_cols=292 Identities=12% Similarity=0.119 Sum_probs=191.5
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCC---CCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDG---GDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAI 77 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i 77 (358)
++|+|+|+.|+++.. + .+++|+...+ ....+..+ ...+.++ +|||||++|+.++ ++.|
T Consensus 114 ~~~SpDg~~l~~~~~-~-----~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~-------~~SPDG~~la~~~-~~~i 174 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-G-----ELYLYDLKQEGKAAVRQLTHG-----EGFATDA-------KLSPKGGFVSFIR-GRNL 174 (741)
T ss_dssp CEECTTSSEEEEEET-T-----EEEEEESSSCSTTSCCBCCCS-----SSCEEEE-------EECTTSSEEEEEE-TTEE
T ss_pred eEECCCCCEEEEEeC-C-----cEEEEECCCCCcceEEEcccC-----Ccccccc-------cCCCCCCEEEEEe-CCcE
Confidence 468999999999865 4 8999998765 22222222 1222334 4599999999987 5699
Q ss_pred EEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCC------------
Q 018293 78 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK------------ 145 (358)
Q Consensus 78 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg------------ 145 (358)
++||+.+++.... ....... . ...............+.+++|+|+ +++|++++.|+
T Consensus 175 ~~~d~~~g~~~~~---~~~~~~~-~-------~~g~~~~v~~~~~~~~~~~~~SpD-g~~l~~~~~d~~~~~~~~~~~~~ 242 (741)
T 2ecf_A 175 WVIDLASGRQMQL---TADGSTT-I-------GNGIAEFVADEEMDRHTGYWWAPD-DSAIAYARIDESPVPVQKRYEVY 242 (741)
T ss_dssp EEEETTTTEEEEC---CCCCCSS-E-------EESCCCHHHHHHSCCCCSEEECTT-SSCEEEEEEECTTSCEEEEEEEC
T ss_pred EEEecCCCCEEEe---ccCCccc-e-------eccccceeeeeccccccceEECCC-CCEEEEEEEcCCCCceEecCCCC
Confidence 9999976432210 0000000 0 000000000000122578999999 56777777665
Q ss_pred ---------------------eEEEEECCC-Cceeeeec--ccccceeeEEEcCCCCcEEEEEeC-----CCcEEEEEcc
Q 018293 146 ---------------------QVKIWDVAA-GKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSF-----DRSVVMKDAR 196 (358)
Q Consensus 146 ---------------------~v~iwd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~ 196 (358)
.|.+||+.+ ++...... .|...+..++| |++ +.|++++. +..|.+||+.
T Consensus 243 p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg-~~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 243 ADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDP-QHLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp SSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EET-TEEEEEEEETTSSEEEEEEEETT
T ss_pred CCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCC-CEEEEEEecccCCeEEEEEEECC
Confidence 889999988 77554432 47788999999 999 66665543 5789999999
Q ss_pred cCCCccceeeecC----CeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEE-EecCC
Q 018293 197 ISTHSGFKWAVAA----DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI-SYNPL 271 (358)
Q Consensus 197 ~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i-~~~~~ 271 (358)
+++.......+.. .+..++|+|++. +++++..+|.+++|.+... .. ...+..+...+..+ .|+|+
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~--------~~-~~~l~~~~~~v~~~~~~s~d 390 (741)
T 2ecf_A 321 SNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSK--------GK-AAALTHGNWSVDELLAVDEK 390 (741)
T ss_dssp TCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSS--------SC-EEESCCSSSCEEEEEEEETT
T ss_pred CCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCC--------CC-eeeeeecceEEEeEeEEeCC
Confidence 8776553333332 456899999765 8888999998888887633 14 56666777788887 59999
Q ss_pred CCcEEEEEeCCC--cEEEEecCC-CCceeeEecCCCCceeEEEEEcCCCCeEEEEEccC---CeEEEEEccCC
Q 018293 272 VPNLLATGSTDK--MVKLWDLSN-NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEIWDTLSD 338 (358)
Q Consensus 272 ~~~~l~~~~~dg--~i~i~d~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~vw~~~~~ 338 (358)
+..++++++.++ .+++|++.. +. ....+.. ...+..++|+|+|++++++.+.. +.+.+|+...+
T Consensus 391 g~~l~~~~~~~~~~~~~l~~~~~~g~--~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 391 AGLAYFRAGIESARESQIYAVPLQGG--QPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp TTEEEEEECSSCTTCBEEEEEETTCC--CCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred CCEEEEEEeCCCCceEEEEEEEcCCC--Ceeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 944555666666 899999864 33 2333443 55688999999999766555544 46888987543
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=7.1e-23 Score=173.17 Aligned_cols=249 Identities=11% Similarity=0.042 Sum_probs=170.8
Q ss_pred CccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcE
Q 018293 58 PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 137 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 137 (358)
.+++++++.++++++.++.|++||..+++....... +....+..++|+|++..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--------------------------~~~~~~~~~~~s~dg~~~ 57 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--------------------------PDKFGPGTAMMAPDNRTA 57 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC--------------------------SSCCSSCEEEECTTSSEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec--------------------------CCCCCCceeEECCCCCEE
Confidence 345688999999999999999999976543322110 111246789999995545
Q ss_pred EEEEEcCCeEEEEECCCCceeeeeccc------ccceeeEEEcCCCCcEEEEEeCC------------CcEEEEEcccCC
Q 018293 138 LASASADKQVKIWDVAAGKCNLTLEHH------TDKVQAVAWNHHSPQILLSGSFD------------RSVVMKDARIST 199 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~ 199 (358)
++++..++.|.+||+.+++.+..+... ...+..++|+|++ +++++++.+ +.|.+||+.+++
T Consensus 58 ~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 58 YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred EEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 566667899999999999887766532 2337899999999 777777755 899999998754
Q ss_pred Ccc--ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCC-------------------------c
Q 018293 200 HSG--FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQ-------------------------S 252 (358)
Q Consensus 200 ~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------------------~ 252 (358)
... ........+.+++|+|++. + ++++ +.|.+||+.+++......... .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~s~dg~-l-~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (349)
T 1jmx_B 137 EAKPVRTFPMPRQVYLMRAADDGS-L-YVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSM 212 (349)
T ss_dssp GBCCSEEEECCSSCCCEEECTTSC-E-EEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEE
T ss_pred ccceeeeccCCCcccceeECCCCc-E-EEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEe
Confidence 322 1233445688999999765 4 4443 449999998764211000000 0
Q ss_pred ----------------------------------cEEEeecCCceeEEEecC-CCCcEEEEEeCCCcEEEEecCCCCcee
Q 018293 253 ----------------------------------SFTLHAHDKAVCTISYNP-LVPNLLATGSTDKMVKLWDLSNNQPSC 297 (358)
Q Consensus 253 ----------------------------------~~~~~~~~~~i~~i~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~ 297 (358)
...+..+...+.+++++| ++ ++++++ ++.|.+||+.+++...
T Consensus 213 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 213 LYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp EEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTEEEE
T ss_pred eeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECccCeEEE
Confidence 000011123456788899 88 777777 8899999999887433
Q ss_pred eEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 298 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
.... ...+.+++|+|++++ |++++.++.|.+||+.+++.+.+.
T Consensus 290 ~~~~---~~~~~~~~~s~dg~~-l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 290 AANL---DHTYYCVAFDKKGDK-LYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp EEEC---SSCCCEEEECSSSSC-EEEESBSSEEEEEETTTTEEEEEE
T ss_pred EEcC---CCCccceEECCCCCE-EEEecCCCeEEEEeccccceeeee
Confidence 3222 234678999999986 445788899999999998877654
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=2.3e-22 Score=169.62 Aligned_cols=269 Identities=10% Similarity=0.100 Sum_probs=165.5
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEecc--CCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecC-CCCeE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEES--DGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS-MEPAI 77 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i 77 (358)
++|+|+++.|+++..++ + .+.+|+.. .+ .+...........+.++.| +|++++|++++ .++.|
T Consensus 43 ~~~spdg~~l~~~~~~~--~--~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------s~dg~~l~~~~~~~~~i 108 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPE--F--RVLAYRIAPDDG---ALTFAAESALPGSLTHIST-------DHQGQFVFVGSYNAGNV 108 (343)
T ss_dssp EEECTTSSEEEEEETTT--T--EEEEEEECTTTC---CEEEEEEEECSSCCSEEEE-------CTTSSEEEEEETTTTEE
T ss_pred EEECCCCCEEEEeecCC--C--eEEEEEecCCCC---ceeeccccccCCCCcEEEE-------cCCCCEEEEEecCCCeE
Confidence 46899999988886653 3 55555544 33 2222222222233444444 89999776655 58999
Q ss_pred EEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE-cCCeEEEEECCC-C
Q 018293 78 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-ADKQVKIWDVAA-G 155 (358)
Q Consensus 78 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~-~ 155 (358)
.+||+..+... ....... ....+.+++|+|+ ++++++++ .++.|.+||+.+ +
T Consensus 109 ~~~d~~~~~~~------------------------~~~~~~~-~~~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 109 SVTRLEDGLPV------------------------GVVDVVE-GLDGCHSANISPD-NRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp EEEEEETTEEE------------------------EEEEEEC-CCTTBCCCEECTT-SSEEEEEEGGGTEEEEEEECTTS
T ss_pred EEEECCCCccc------------------------ccccccc-CCCCceEEEECCC-CCEEEEecCCCCEEEEEEecCCC
Confidence 99999421111 1111112 2345889999999 45666666 899999999987 6
Q ss_pred ceee----eecc-cccceeeEEEcCCCCcEEEEEeCCCcEEEEEccc--CCCccceee--e------cCCeeeEEEcCCC
Q 018293 156 KCNL----TLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI--STHSGFKWA--V------AADVESLAWDPHA 220 (358)
Q Consensus 156 ~~~~----~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~--~------~~~i~~~~~~~~~ 220 (358)
+... .+.. ....+..++|+|++..+++++..++.+.+||+.. ++....... . ...+..++|+|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg 242 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 242 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCC
Confidence 4432 2222 3357888999999933445555899999999964 222111110 1 1245679999976
Q ss_pred CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe-CCCcEEEEec--CCCCcee
Q 018293 221 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLWDL--SNNQPSC 297 (358)
Q Consensus 221 ~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~d~--~~~~~~~ 297 (358)
..+++++..++.|.+||+...... ...+..+..+.. +.+++|+|++ ++|++++ .++.|.+|++ .+++...
T Consensus 243 ~~l~v~~~~~~~i~v~d~~~~~~~-----~~~~~~~~~~~~-~~~~~~s~dg-~~l~~~~~~~~~v~v~~~d~~~g~~~~ 315 (343)
T 1ri6_A 243 RHLYACDRTASLITVFSVSEDGSV-----LSKEGFQPTETQ-PRGFNVDHSG-KYLIAAGQKSHHISVYEIVGEQGLLHE 315 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCC-----EEEEEEEECSSS-CCCEEECTTS-SEEEEECTTTCEEEEEEEETTTTEEEE
T ss_pred CEEEEEecCCCEEEEEEEcCCCCc-----eEEeeeecCCCc-cceEEECCCC-CEEEEecCCCCeEEEEEEcCCCceeeE
Confidence 655556668999999999832100 133344444444 8899999998 6666666 6899999955 4554333
Q ss_pred eEecCCCCceeEEEEEcCCC
Q 018293 298 IASRNPKAGAVFSVAFSEDS 317 (358)
Q Consensus 298 ~~~~~~~~~~v~~~~~~~~~ 317 (358)
+..+... ....+++|.++.
T Consensus 316 ~~~~~~g-~~p~~i~~~~~~ 334 (343)
T 1ri6_A 316 KGRYAVG-QGPMWVVVNAHE 334 (343)
T ss_dssp EEEEECS-SSCCEEEEEEEC
T ss_pred ccccccC-CCCeeEEEEccc
Confidence 4333332 334556666643
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=3.3e-22 Score=185.50 Aligned_cols=301 Identities=13% Similarity=0.099 Sum_probs=182.2
Q ss_pred CcccCCCcEEEEEEecCCCc----eEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCe
Q 018293 1 MTINPNDAVIVCARNEDDVS----HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPA 76 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~ 76 (358)
++|||+|+.|+++..+.... .-.+++|+...+....+.. .. .....+. .++|||||++||.++. +.
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~-~~-~~~~~~~-------~~~~SPdG~~la~~~~-~~ 135 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP-PE-VSNAKLQ-------YAGWGPKGQQLIFIFE-NN 135 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC-TT-CCSCCCS-------BCCBCSSTTCEEEEET-TE
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC-Cc-ccccccc-------ccEECCCCCEEEEEEC-Ce
Confidence 36899999999996543211 1478899887653211111 10 0001112 4556999999999885 79
Q ss_pred EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCc---------ccEEEEecCCCCCcEEEEEEcCC--
Q 018293 77 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT---------DSVLGLAWNKEFRNILASASADK-- 145 (358)
Q Consensus 77 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~~l~s~~~dg-- 145 (358)
|++||+.+++..... ..+ . . ...+.++. ..+.+++|+|+ ++.|++++.|+
T Consensus 136 i~~~~~~~g~~~~~~--~~~-~-------------~--~~~~~g~~~~v~~ee~~~~~~~~~~SpD-g~~la~~~~~~~~ 196 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVV--STG-K-------------E--GVIYNGLSDWLYEEEILKTHIAHWWSPD-GTRLAYAAINDSR 196 (723)
T ss_dssp EEEESSSSSCCEEEE--CCC-B-------------T--TTEEEEECCHHHHHTTSSSSEEEEECTT-SSEEEEEEEECTT
T ss_pred EEEEECCCCceEEEe--cCC-C-------------C--CceECcccceeEEEEeccCcceEEECCC-CCEEEEEEECCCc
Confidence 999999865432210 000 0 0 00000111 23478999999 56787777553
Q ss_pred --------------------------------eEEEEECCCCceeeeeccc------ccceeeEEEcCCCCcEEEEEeC-
Q 018293 146 --------------------------------QVKIWDVAAGKCNLTLEHH------TDKVQAVAWNHHSPQILLSGSF- 186 (358)
Q Consensus 146 --------------------------------~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~- 186 (358)
.|.+||+.+++....+..+ ...+..++|+|+| +++++...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~ 275 (723)
T 1xfd_A 197 VPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST-KVAVTWLNR 275 (723)
T ss_dssp SCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS-EEEEEEEET
T ss_pred cceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCC-eEEEEEEcC
Confidence 7999999988765556543 5678999999999 67766543
Q ss_pred ---CCcEEEEEcccCCCccceeee-cCCe----eeEEEcCCCCCeEEE-EecCC------eEEEEEc-ccCCCCCCCCCC
Q 018293 187 ---DRSVVMKDARISTHSGFKWAV-AADV----ESLAWDPHAEHSFVV-SLEDG------TIKGFDI-RTAKSDPDSTSQ 250 (358)
Q Consensus 187 ---dg~i~i~d~~~~~~~~~~~~~-~~~i----~~~~~~~~~~~~~~~-~~~dg------~i~i~d~-~~~~~~~~~~~~ 250 (358)
+..|.+||+.+++........ ...+ ..++|+|++..++++ +..++ .|.+||. ..+..
T Consensus 276 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~------- 348 (723)
T 1xfd_A 276 AQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN------- 348 (723)
T ss_dssp TSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS-------
T ss_pred CCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc-------
Confidence 357999999887754433222 2333 378999987766655 55677 4666663 33210
Q ss_pred CccEEEeecCCceeE-EEecCCCCcEEEEE-eCC--CcEEEEecCCCCceeeEecCC---CCceeEEEEEcCCCCeEEEE
Q 018293 251 QSSFTLHAHDKAVCT-ISYNPLVPNLLATG-STD--KMVKLWDLSNNQPSCIASRNP---KAGAVFSVAFSEDSPFVLAI 323 (358)
Q Consensus 251 ~~~~~~~~~~~~i~~-i~~~~~~~~~l~~~-~~d--g~i~i~d~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~ 323 (358)
.....+..+...+.. ++|+|++ +.|+.. ..+ +.+++|++..........+.. |...+..++|+|+|+++++.
T Consensus 349 ~~~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 349 DNIQSITSGDWDVTKILAYDEKG-NKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp CCCCBSCCSSSCEEEEEEEETTT-TEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred cceeEeecCCeEEEeeeEEcCCC-CEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 002223333334444 6999999 666544 444 789999986532111222332 56678899999999976665
Q ss_pred EccCC--eEEEEEccCCC
Q 018293 324 GGSKG--KLEIWDTLSDA 339 (358)
Q Consensus 324 ~~~dg--~i~vw~~~~~~ 339 (358)
.+..+ ...+++..+++
T Consensus 428 ~~~~~~p~~~~~~~~~~~ 445 (723)
T 1xfd_A 428 CEGPGVPMVTVHNTTDKK 445 (723)
T ss_dssp CCSSSSCCEEEEETTTCC
T ss_pred ccCCCCCeEEEEECCCCC
Confidence 55444 23445554444
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=1.9e-22 Score=193.92 Aligned_cols=280 Identities=9% Similarity=0.009 Sum_probs=197.4
Q ss_pred Cccc-CCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEE-
Q 018293 1 MTIN-PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE- 78 (358)
Q Consensus 1 l~~~-p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~- 78 (358)
++|+ |+|+.|+++. .+ .+++++...+....+..+.. ..+. .+.|+ ||+.|++++.++.+.
T Consensus 301 ~~~S~pdG~~la~~~-~~-----~i~~~~~~~~~~~~~~~~~~----~~~~-------~~~~s-dg~~l~~~s~~~~l~~ 362 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS-RG-----QAFIQDVSGTYVLKVPEPLR----IRYV-------RRGGD-TKVAFIHGTREGDFLG 362 (1045)
T ss_dssp EEEEECGGGCEEEEE-TT-----EEEEECTTSSBEEECSCCSC----EEEE-------EECSS-SEEEEEEEETTEEEEE
T ss_pred eeecCCCCCEEEEEE-cC-----EEEEEcCCCCceEEccCCCc----ceEE-------eeeEc-CCCeEEEEECCCceEE
Confidence 3578 9999999885 44 78888876542111111110 0112 34568 999999988888888
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCcee
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN 158 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 158 (358)
+|++.+... ..+.+|...+..++|+|+ +++|++++.++.|++||+.+++..
T Consensus 363 ~~d~~~~~~----------------------------~~l~~~~~~~~~~~~SpD-G~~la~~~~~~~v~~~d~~tg~~~ 413 (1045)
T 1k32_A 363 IYDYRTGKA----------------------------EKFEENLGNVFAMGVDRN-GKFAVVANDRFEIMTVDLETGKPT 413 (1045)
T ss_dssp EEETTTCCE----------------------------EECCCCCCSEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEECCCCCc----------------------------eEecCCccceeeeEECCC-CCEEEEECCCCeEEEEECCCCceE
Confidence 888764321 112257788999999999 679999999999999999999888
Q ss_pred eeecccccceeeEEEcCCCCcEEEEEeCC----------CcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEe
Q 018293 159 LTLEHHTDKVQAVAWNHHSPQILLSGSFD----------RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSL 228 (358)
Q Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 228 (358)
..+..|...+.+++|+|+| ++|++++.+ +.|++||+.+++ ......+...+..++|+|++. .++.++
T Consensus 414 ~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~-~l~~~s 490 (1045)
T 1k32_A 414 VIERSREAMITDFTISDNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSK-NLYYLS 490 (1045)
T ss_dssp EEEECSSSCCCCEEECTTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSC-EEEEEE
T ss_pred EeccCCCCCccceEECCCC-CeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCC-EEEEEe
Confidence 7777888999999999999 777776654 489999998766 333445666788899999654 777777
Q ss_pred cCCeEEEEEcccCCCCCC---------------------------------C-CCCCccEEEeecCCceeEEEecCCCCc
Q 018293 229 EDGTIKGFDIRTAKSDPD---------------------------------S-TSQQSSFTLHAHDKAVCTISYNPLVPN 274 (358)
Q Consensus 229 ~dg~i~i~d~~~~~~~~~---------------------------------~-~~~~~~~~~~~~~~~i~~i~~~~~~~~ 274 (358)
.++....|+......... . .....+..+..|...+..++++|++ .
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg-~ 569 (1045)
T 1k32_A 491 YRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESS-I 569 (1045)
T ss_dssp SCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSE-E
T ss_pred cccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCC-e
Confidence 777766676432211000 0 0011234455567788999999988 6
Q ss_pred EEEE-------------EeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 275 LLAT-------------GSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 275 ~l~~-------------~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
++++ ......|.+||+.+++...+. ..+.+++|+|||++ |++++.+ .|++||+.+++
T Consensus 570 ~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~------~~v~~~~~S~DG~~-l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 570 LIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK------NNLTDLRLSADRKT-VMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE------EEEEEEEECTTSCE-EEEEETT-SCEEEEESSCT
T ss_pred EEEEecccCcccccccccCCCceEEEEECCCCcEEEee------cCcceEEECCCCCE-EEEEcCC-cEEEEeCccCc
Confidence 6664 122456888999888742222 56889999999996 6666655 89999998876
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=1.5e-21 Score=180.52 Aligned_cols=234 Identities=10% Similarity=0.102 Sum_probs=166.1
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+|||| ++++.+. ++.|++||+.+++.. .+..+...+.+++|+|+ ++.|+
T Consensus 88 ~~spd-~~~~~~~-~~~i~~~d~~~~~~~----------------------------~l~~~~~~~~~~~~Spd-G~~la 136 (706)
T 2z3z_A 88 LDAGR-GLVVLFT-QGGLVGFDMLARKVT----------------------------YLFDTNEETASLDFSPV-GDRVA 136 (706)
T ss_dssp EETTT-TEEEEEE-TTEEEEEETTTTEEE----------------------------EEECCTTCCTTCEECTT-SSEEE
T ss_pred EECCC-CeEEEEE-CCEEEEEECCCCceE----------------------------EccCCcccccCCcCCCC-CCEEE
Confidence 45899 5555553 599999999754321 11235567888999999 56777
Q ss_pred EEEcCCeEEEEECCC-----Cceeeeecccccc--------------eeeEEEcCCCCcEEEEEe---------------
Q 018293 140 SASADKQVKIWDVAA-----GKCNLTLEHHTDK--------------VQAVAWNHHSPQILLSGS--------------- 185 (358)
Q Consensus 140 s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~~l~~~~--------------- 185 (358)
++ .|+.|.+||+.+ ++.......+... +.++.|+|+| +.|++++
T Consensus 137 ~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~ 214 (706)
T 2z3z_A 137 YV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYH 214 (706)
T ss_dssp EE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECC
T ss_pred EE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccC
Confidence 74 789999999998 7766544433332 4899999999 7787776
Q ss_pred ------------------CCCcEEEEEcccCCCcccee--eecCCeeeEEEcCCCCCeEEEEecCC-----eEEEEEccc
Q 018293 186 ------------------FDRSVVMKDARISTHSGFKW--AVAADVESLAWDPHAEHSFVVSLEDG-----TIKGFDIRT 240 (358)
Q Consensus 186 ------------------~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~dg-----~i~i~d~~~ 240 (358)
.+..|.+||+.+++...... .+...+..++|+|++. .+++++.++ .|++||+.+
T Consensus 215 ~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 215 PLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp SSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTT
T ss_pred CCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCC
Confidence 45789999998776433221 3456689999999654 677766665 899999987
Q ss_pred CCCCCCCCCCCccEEEe--ecCC---ceeEEEecC--CCCcEEEEEeCCCcEEEEecC-CCCceeeEecCCCCceeEE-E
Q 018293 241 AKSDPDSTSQQSSFTLH--AHDK---AVCTISYNP--LVPNLLATGSTDKMVKLWDLS-NNQPSCIASRNPKAGAVFS-V 311 (358)
Q Consensus 241 ~~~~~~~~~~~~~~~~~--~~~~---~i~~i~~~~--~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~v~~-~ 311 (358)
+ .....+. .+.. .+.+++|+| ++ .+++++..|+.+++|++. +++ ....+..+...+.. +
T Consensus 294 g---------~~~~~~~~~~~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~~~~--~~~~l~~~~~~v~~~~ 361 (706)
T 2z3z_A 294 G---------RFVRTLFVETDKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDTTGR--LIRQVTKGEWEVTNFA 361 (706)
T ss_dssp C---------CEEEEEEEEECSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEETTSC--EEEECCCSSSCEEEEE
T ss_pred C---------ceeeEEEEccCCCeECccCCceeecCCCC-EEEEEEccCCccEEEEEECCCC--EEEecCCCCeEEEeee
Confidence 6 2222222 2222 246789999 88 789999999999999876 343 35556667777876 7
Q ss_pred EEcCCCCeEEEEEccCC----eEEEEEccCCC
Q 018293 312 AFSEDSPFVLAIGGSKG----KLEIWDTLSDA 339 (358)
Q Consensus 312 ~~~~~~~~~l~~~~~dg----~i~vw~~~~~~ 339 (358)
+|+|+++.++++++.++ .|..||+.+++
T Consensus 362 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 362 GFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp EECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred EEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 99999997677776665 67777776654
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=2.3e-22 Score=181.88 Aligned_cols=231 Identities=11% Similarity=0.107 Sum_probs=167.2
Q ss_pred CccccCCCceEEecCC-CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCc-ccEEEEecCCCCC
Q 018293 58 PLKDREKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT-DSVLGLAWNKEFR 135 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~ 135 (358)
+++|+|||++||+++. ||+++||++++++.. .+..|. ..+..++|+|+
T Consensus 26 ~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~----------------------------~lt~~~~~~~~~~~~spd-- 75 (582)
T 3o4h_A 26 SLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV----------------------------KLNREPINSVLDPHYGVG-- 75 (582)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEETTEEE----------------------------ECCSSCCSEECEECTTCS--
T ss_pred eeecCCCCCeEEEEEccCCceeEEEEcCCCcE----------------------------eeecccccccccccCCCC--
Confidence 4456999999999887 999999998543211 122344 68999999998
Q ss_pred cEEEEEEc---CCeEEEEECCC---CceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecC
Q 018293 136 NILASASA---DKQVKIWDVAA---GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA 209 (358)
Q Consensus 136 ~~l~s~~~---dg~v~iwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 209 (358)
+++++++. +....+|.+.. +... .+... ..+...+|+|++...+++++.++.+.+||+.+++... ...+..
T Consensus 76 ~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-l~~~~~ 152 (582)
T 3o4h_A 76 RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-LARLPG 152 (582)
T ss_dssp EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-EEEESS
T ss_pred eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-eecCCC
Confidence 57777765 45556655533 2222 33322 2344668888886666666666667799998876544 222333
Q ss_pred CeeeEEEcCCCCCeEEEEecC----CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC--
Q 018293 210 DVESLAWDPHAEHSFVVSLED----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK-- 283 (358)
Q Consensus 210 ~i~~~~~~~~~~~~~~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg-- 283 (358)
.+++|+|++. .++.++.+ +.|++||+.++ . ...+..|...+..++|+||| +.|+++..++
T Consensus 153 --~~~~~spDG~-~la~~~~~~~~~~~i~~~d~~~g---------~-~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~ 218 (582)
T 3o4h_A 153 --FGFVSDIRGD-LIAGLGFFGGGRVSLFTSNLSSG---------G-LRVFDSGEGSFSSASISPGM-KVTAGLETAREA 218 (582)
T ss_dssp --CEEEEEEETT-EEEEEEEEETTEEEEEEEETTTC---------C-CEEECCSSCEEEEEEECTTS-CEEEEEECSSCE
T ss_pred --ceEEECCCCC-EEEEEEEcCCCCeEEEEEcCCCC---------C-ceEeecCCCccccceECCCC-CEEEEccCCCee
Confidence 8899999654 77766665 77999998875 2 34667888889999999999 7888888888
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEE--------EcCCCCeEEEEEccCCeEEEEEccCCCcc
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVA--------FSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 341 (358)
.|++||+.+++.. ....|...+..++ |+|||. ++++++.||.+++|++ ++..
T Consensus 219 ~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 219 RLVTVDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLPDGR-LAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp EEEEECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECTTSC-EEEEEEETTEEEEEET--TEEE
T ss_pred EEEEEcCCCCcEE---EccCCCcChhhhhhccccceeEcCCCc-EEEEEEcCCcEEEEEE--CCee
Confidence 8999999988743 5566666666666 999995 7999999999999999 5443
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=3.2e-21 Score=185.46 Aligned_cols=277 Identities=12% Similarity=0.063 Sum_probs=199.4
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceee---------cCCcccceeeecCCcccc-CCCceEEec
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHII---------IPAFPLCMAWLDCPLKDR-EKGNFMAVG 71 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~s-~~~~~l~~g 71 (358)
.|+|+|+.|+.+ .++ .+++|+.... .+....... ....+.. ++|| |||++|+++
T Consensus 251 ~~SpDG~~la~~-~~~-----~i~~~d~~~~---~l~~l~~~~~~~~~~~~~~~~~v~~-------~~~S~pdG~~la~~ 314 (1045)
T 1k32_A 251 HLNTDGRRILFS-KGG-----SIYIFNPDTE---KIEKIEIGDLESPEDRIISIPSKFA-------EDFSPLDGDLIAFV 314 (1045)
T ss_dssp EEEESSSCEEEE-ETT-----EEEEECTTTC---CEEECCCCCCCBCCSEEEECGGGGE-------EEEEECGGGCEEEE
T ss_pred eEcCCCCEEEEE-eCC-----EEEEecCCce---EeeeeccCcccccccccccccccce-------eeecCCCCCEEEEE
Confidence 578999998888 455 8888887332 222111000 0011223 4459 999999998
Q ss_pred CCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcc-cEEEEecCCCCCcEEEEEEcCCeEE-E
Q 018293 72 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD-SVLGLAWNKEFRNILASASADKQVK-I 149 (358)
Q Consensus 72 ~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~v~-i 149 (358)
+ ++.|.+|++.++... .+..|.. .+..++|+ + +..|+.++.++.+. +
T Consensus 315 ~-~~~i~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~s-d-g~~l~~~s~~~~l~~~ 363 (1045)
T 1k32_A 315 S-RGQAFIQDVSGTYVL----------------------------KVPEPLRIRYVRRGGD-T-KVAFIHGTREGDFLGI 363 (1045)
T ss_dssp E-TTEEEEECTTSSBEE----------------------------ECSCCSCEEEEEECSS-S-EEEEEEEETTEEEEEE
T ss_pred E-cCEEEEEcCCCCceE----------------------------EccCCCcceEEeeeEc-C-CCeEEEEECCCceEEE
Confidence 8 889999998643211 1234666 89999999 7 66888888888888 9
Q ss_pred EECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEec
Q 018293 150 WDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE 229 (358)
Q Consensus 150 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 229 (358)
||+.+++... +..|...+..++|+|++ +.|++++.++.|++||+.+++.......+...+..++|+|++. ++++++.
T Consensus 364 ~d~~~~~~~~-l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~-~la~~~~ 440 (1045)
T 1k32_A 364 YDYRTGKAEK-FEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSR-FIAYGFP 440 (1045)
T ss_dssp EETTTCCEEE-CCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSC-EEEEEEE
T ss_pred EECCCCCceE-ecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCC-eEEEEec
Confidence 9998776544 33777889999999999 8899999999999999998876654546778899999999665 6666555
Q ss_pred C----------CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc----
Q 018293 230 D----------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP---- 295 (358)
Q Consensus 230 d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---- 295 (358)
+ +.|++||+.++ . ...+..|...+..++|+|+| +.|+.++.++...+|+......
T Consensus 441 ~~~~~~~~~~~~~i~l~d~~~g---------~-~~~l~~~~~~~~~~~~spdG-~~l~~~s~~~~~~~~~~~~~~~~~~~ 509 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDMEGR---------K-IFAATTENSHDYAPAFDADS-KNLYYLSYRSLDPSPDRVVLNFSFEV 509 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEETTTT---------E-EEECSCSSSBEEEEEECTTS-CEEEEEESCCCCCEECSSSSCEECCS
T ss_pred CccccccCCCCCeEEEEECCCC---------c-EEEeeCCCcccCCceEcCCC-CEEEEEecccCCcCcchhcccccccc
Confidence 4 48999999875 3 55667788888999999999 7888888877766666432210
Q ss_pred -------------------------------------eeeEecCCCCceeEEEEEcCCCCeEEEE-------------Ec
Q 018293 296 -------------------------------------SCIASRNPKAGAVFSVAFSEDSPFVLAI-------------GG 325 (358)
Q Consensus 296 -------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~-------------~~ 325 (358)
..+..+..+.+.+..++++|+|.. +++ .+
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~-~~~~~~~g~~~~~~~~~~ 588 (1045)
T 1k32_A 510 VSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSIL-IYSVPVHGEFAAYYQGAP 588 (1045)
T ss_dssp CBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEE-EEECCCCCSHHHHHHCCC
T ss_pred CceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeE-EEEecccCcccccccccC
Confidence 012233446677899999999984 553 12
Q ss_pred cCCeEEEEEccCCCc
Q 018293 326 SKGKLEIWDTLSDAG 340 (358)
Q Consensus 326 ~dg~i~vw~~~~~~~ 340 (358)
....|.+||+.+++.
T Consensus 589 ~~~~l~~~d~~~~~~ 603 (1045)
T 1k32_A 589 EKGVLLKYDVKTRKV 603 (1045)
T ss_dssp CCEEEEEEETTTCCE
T ss_pred CCceEEEEECCCCcE
Confidence 345788899887763
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=1.1e-21 Score=177.33 Aligned_cols=269 Identities=8% Similarity=0.028 Sum_probs=179.3
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCC---CCeE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM---EPAI 77 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~---dg~i 77 (358)
++|+|||+.|+.+...+ +..++|..+... ...+..++. .... ++.|||| +++++++. +...
T Consensus 27 ~~~~~DG~~la~~s~~~--g~~~lw~~~~g~--~~~lt~~~~----~~~~-------~~~~spd-~~l~~~~~~~g~~~~ 90 (582)
T 3o4h_A 27 LQGVVDGDKLLVVGFSE--GSVNAYLYDGGE--TVKLNREPI----NSVL-------DPHYGVG-RVILVRDVSKGAEQH 90 (582)
T ss_dssp EEEEETTTEEEEEEEET--TEEEEEEEETTE--EEECCSSCC----SEEC-------EECTTCS-EEEEEEECSTTSCCE
T ss_pred eecCCCCCeEEEEEccC--CceeEEEEcCCC--cEeeecccc----cccc-------cccCCCC-eEEEEeccCCCCcce
Confidence 46899999999986644 566666653221 111111110 1111 3456899 77777664 5567
Q ss_pred EEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce
Q 018293 78 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC 157 (358)
Q Consensus 78 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 157 (358)
+||.++..+.-.. . .+. ....+...+|+|++...+++.+.++.+.+||+.+++.
T Consensus 91 ~l~~~~~~~~g~~---------------------~----~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~ 144 (582)
T 3o4h_A 91 ALFKVNTSRPGEE---------------------Q----RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL 144 (582)
T ss_dssp EEEEEETTSTTCC---------------------E----ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE
T ss_pred EEEEEeccCCCcc---------------------c----ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE
Confidence 7777653110000 0 010 1112335577887655555555555566999998876
Q ss_pred eeeecccccceeeEEEcCCCCcEEEEEeCC----CcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCC--
Q 018293 158 NLTLEHHTDKVQAVAWNHHSPQILLSGSFD----RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG-- 231 (358)
Q Consensus 158 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg-- 231 (358)
......+ . .+++|+|+| +.+++++.+ +.|++||+.+++... ...+...+..++|+|++. .++++..++
T Consensus 145 ~~l~~~~-~--~~~~~spDG-~~la~~~~~~~~~~~i~~~d~~~g~~~~-l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~ 218 (582)
T 3o4h_A 145 RELARLP-G--FGFVSDIRG-DLIAGLGFFGGGRVSLFTSNLSSGGLRV-FDSGEGSFSSASISPGMK-VTAGLETAREA 218 (582)
T ss_dssp EEEEEES-S--CEEEEEEET-TEEEEEEEEETTEEEEEEEETTTCCCEE-ECCSSCEEEEEEECTTSC-EEEEEECSSCE
T ss_pred EEeecCC-C--ceEEECCCC-CEEEEEEEcCCCCeEEEEEcCCCCCceE-eecCCCccccceECCCCC-EEEEccCCCee
Confidence 5554433 3 789999999 888877766 789999998877653 456667789999999655 677888888
Q ss_pred eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEE--------ecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCC
Q 018293 232 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTIS--------YNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP 303 (358)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~--------~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 303 (358)
.|++||+.++ ... .+..|...+..++ |+|+| .++++++.|+.+++|++ ++. .. .
T Consensus 219 ~i~~~d~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~--~~---~ 280 (582)
T 3o4h_A 219 RLVTVDPRDG---------SVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GER--VE---A 280 (582)
T ss_dssp EEEEECTTTC---------CEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEE--EC---C
T ss_pred EEEEEcCCCC---------cEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCe--ec---c
Confidence 8999999876 333 5566777777777 99999 99999999999999999 442 21 3
Q ss_pred CCceeEEEEEcCCCCeEEEEEccCC---eEEEEEccC
Q 018293 304 KAGAVFSVAFSEDSPFVLAIGGSKG---KLEIWDTLS 337 (358)
Q Consensus 304 ~~~~v~~~~~~~~~~~~l~~~~~dg---~i~vw~~~~ 337 (358)
..+.+.+++|+ +++ ++++++.+. .+.+|+..+
T Consensus 281 ~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 281 PQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp CSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC
T ss_pred CCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC
Confidence 34678999999 888 467777664 366666543
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=4.5e-20 Score=155.94 Aligned_cols=259 Identities=8% Similarity=0.102 Sum_probs=158.9
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeece-eecCCcccceeeecCCccccCCCceEEecC-CCCeEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHH-IIIPAFPLCMAWLDCPLKDREKGNFMAVGS-MEPAIE 78 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~ 78 (358)
++|+|+|+ |+++...+ ..-.+++|+...+ .+..... ......+..+ +|+|+|++|++++ .++.|.
T Consensus 45 ~a~spdg~-l~~~~~~~--~~~~v~~~~~~~g---~~~~~~~~~~~~~~p~~~-------a~spdg~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKED--DEGGIAAWQIDGQ---TAHKLNTVVAPGTPPAYV-------AVDEARQLVYSANYHKGTAE 111 (347)
T ss_dssp EEECTTCE-EEEEEEET--TEEEEEEEEEETT---EEEEEEEEEEESCCCSEE-------EEETTTTEEEEEETTTTEEE
T ss_pred EEEccCCe-EEEEEecC--CCceEEEEEecCC---cEEEeeeeecCCCCCEEE-------EECCCCCEEEEEeCCCCEEE
Confidence 46899999 55554422 1236777776543 2111111 1122233333 4489999888877 779999
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECC-CCce
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA-AGKC 157 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~ 157 (358)
+|++.............. ....+. ...+...+.+++|+|++. ++++...++.|.+|++. +++.
T Consensus 112 v~~~~~~g~~~~~~~~~~-------------~~~~p~--~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~ 175 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQH-------------SGHGPR--PEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQL 175 (347)
T ss_dssp EEEECTTSCEEEEEEEEC-------------CCCCSS--TTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCE
T ss_pred EEEeCCCCCeeecceeec-------------CCCCCC--ccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcE
Confidence 999963222111110000 000000 112345689999999955 77777778999999998 5543
Q ss_pred ee--eecc-cccceeeEEEcCCCCcEEEEEeCCCcEEEEEccc--CCCccc--eeeec------CCeeeEEEcCCCCCeE
Q 018293 158 NL--TLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI--STHSGF--KWAVA------ADVESLAWDPHAEHSF 224 (358)
Q Consensus 158 ~~--~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~--~~~~~------~~i~~~~~~~~~~~~~ 224 (358)
.. .+.. ....+..++|+|++..++++...++.+.+|++.. ++.... ..... ..+..++|+|++..++
T Consensus 176 ~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~ 255 (347)
T 3hfq_A 176 SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLY 255 (347)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEE
T ss_pred EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEE
Confidence 22 2222 2235778999999933555567789999999875 221110 11111 3478899999766455
Q ss_pred EEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC-CCcEEEE--ecCCCCc
Q 018293 225 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-DKMVKLW--DLSNNQP 295 (358)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-dg~i~i~--d~~~~~~ 295 (358)
++...++.|.+||+..... ...+..+..+...+..++|+|++ ++|++++. ++.|.+| |..+++.
T Consensus 256 v~~~~~~~v~v~~~~~~g~------~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 256 VSNRGYNTLAVFAVTADGH------LTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEEETTTEEEEEEECGGGC------EEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEeCCCCEEEEEEECCCCc------EEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 6677789999999973210 13445555556678999999999 66766665 5899999 5455654
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=3e-22 Score=185.66 Aligned_cols=280 Identities=10% Similarity=0.071 Sum_probs=179.3
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCC-------
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM------- 73 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~------- 73 (358)
++++|++.+++.+ .++ .+++|+...+....+..++... .....+ ++|||||++|++++.
T Consensus 21 ~~~s~dg~~~~~~-~d~-----~i~~~~~~~g~~~~~~~~~~~~-~~~~~~-------~~~SpDg~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 21 PNWISGQEYLHQS-ADN-----NIVLYNIETGQSYTILSNRTMK-SVNASN-------YGLSPDRQFVYLESDYSKLWRY 86 (719)
T ss_dssp CEESSSSEEEEEC-TTS-----CEEEEESSSCCEEEEECHHHHH-TTTCSE-------EEECTTSSEEEEEEEEEECSSS
T ss_pred cEECCCCeEEEEc-CCC-----CEEEEEcCCCcEEEEEcccccc-ccceee-------EEECCCCCeEEEEecCceeEEe
Confidence 3689999655544 444 7888998776433333333211 001223 345999999998876
Q ss_pred --CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEE
Q 018293 74 --EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 151 (358)
Q Consensus 74 --dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 151 (358)
++.|++||+.+++..... . ....+..++|+|+ ++.|+.+. ++.|++||
T Consensus 87 s~~~~i~~~d~~~g~~~~~~-------------------------~---l~~~~~~~~~SPD-G~~la~~~-~~~i~~~~ 136 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRGN-------------------------E---LPRPIQYLCWSPV-GSKLAYVY-QNNIYLKQ 136 (719)
T ss_dssp CEEEEEEEEETTTTEECCSS-------------------------C---CCSSBCCEEECSS-TTCEEEEE-TTEEEEES
T ss_pred ecceEEEEEECCCCccccce-------------------------e---cCcccccceECCC-CCEEEEEE-CCeEEEEe
Confidence 789999999865432100 0 1245888999999 55777764 78999999
Q ss_pred CCCCceeeee-cccccce-----------------eeEEEcCCCCcEEEEEeCCC-------------------------
Q 018293 152 VAAGKCNLTL-EHHTDKV-----------------QAVAWNHHSPQILLSGSFDR------------------------- 188 (358)
Q Consensus 152 ~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~l~~~~~dg------------------------- 188 (358)
+.+++..... .++...+ .+++|+||| +.|++++.|.
T Consensus 137 ~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp 215 (719)
T 1z68_A 137 RPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215 (719)
T ss_dssp STTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred CCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence 9888765433 2222222 489999999 7788776542
Q ss_pred ---------cEEEEEcccCCCc---cc-----eeeecCCeeeEEEcCCCCCeEEEEecC----CeEEEEE----cccCCC
Q 018293 189 ---------SVVMKDARISTHS---GF-----KWAVAADVESLAWDPHAEHSFVVSLED----GTIKGFD----IRTAKS 243 (358)
Q Consensus 189 ---------~i~i~d~~~~~~~---~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~d----g~i~i~d----~~~~~~ 243 (358)
.|.+||+.+++.. .. ...+...+..++|+|+ +.++++.... ..|.+|| ..+++.
T Consensus 216 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 216 KAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp BTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred CCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 7889999876532 10 1135567899999997 4566654332 2488888 655522
Q ss_pred CCCCCCCCccEE--EeecCCcee-----EEEecCCCCcEEE-EEeCCC--cEEEEecCCCCceeeEecCCCCceeEEEEE
Q 018293 244 DPDSTSQQSSFT--LHAHDKAVC-----TISYNPLVPNLLA-TGSTDK--MVKLWDLSNNQPSCIASRNPKAGAVFSVAF 313 (358)
Q Consensus 244 ~~~~~~~~~~~~--~~~~~~~i~-----~i~~~~~~~~~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~ 313 (358)
..+.. ...|...+. .+.|+|+|..+++ +...+| .|.+||+.+++ ...+..+...+..+.+
T Consensus 295 -------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~---~~~lt~~~~~v~~~~~ 364 (719)
T 1z68_A 295 -------PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN---AIQITSGKWEAINIFR 364 (719)
T ss_dssp -------CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT---CEECSCSSSCEEEEEE
T ss_pred -------EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc---eEecccCceEEEEEEE
Confidence 11111 135666666 7899999954444 344555 47777877765 2344455556777777
Q ss_pred cCCCCeEEEEEcc----CCeEEEEEccC
Q 018293 314 SEDSPFVLAIGGS----KGKLEIWDTLS 337 (358)
Q Consensus 314 ~~~~~~~l~~~~~----dg~i~vw~~~~ 337 (358)
+ +++.+++++.. ++..++|.+..
T Consensus 365 ~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 365 V-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp E-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred E-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 7 88866666655 58889998764
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=3.4e-21 Score=165.39 Aligned_cols=282 Identities=11% Similarity=0.025 Sum_probs=176.0
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~ 81 (358)
+|+|+|+.|+.+...+ +..++|+++...+....+...+. .... .+.|+|||+.|+.++.++.|++||
T Consensus 42 ~~SpDg~~l~~~~~~~--g~~~l~~~d~~~g~~~~lt~~~~----~~~~-------~~~~spdg~~l~~~~~~~~l~~~d 108 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFD--GPWNYYLLDLNTQVATQLTEGRG----DNTF-------GGFLSPDDDALFYVKDGRNLMRVD 108 (388)
T ss_dssp CBCTTSCEEEEEECTT--SSCEEEEEETTTCEEEECCCSSC----BCSS-------SCEECTTSSEEEEEETTTEEEEEE
T ss_pred cCCCCCCEEEEEEcCC--CCceEEEEeCCCCceEEeeeCCC----CCcc-------ceEEcCCCCEEEEEeCCCeEEEEE
Confidence 5899999999987644 45578999987652222211111 0111 234599999999999999999999
Q ss_pred cccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEE--ecCCCCCcEEEEE------------------
Q 018293 82 LDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL--AWNKEFRNILASA------------------ 141 (358)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~l~s~------------------ 141 (358)
+.+++.... ...+...+... .++|+ +.+++..
T Consensus 109 ~~~g~~~~~---------------------------~~~~~~~~~~~~~~~~~d-g~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 109 LATLEENVV---------------------------YQVPAEWVGYGTWVANSD-CTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp TTTCCEEEE---------------------------EECCTTEEEEEEEEECTT-SSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred CCCCcceee---------------------------eechhhcccccceeECCC-CCeeccccccCcccccccccchhhh
Confidence 986543221 11233334333 34788 4566532
Q ss_pred ----EcCCeEEEEECCCCceeeeecccccceeeEEEcC-CCCcEEEEEeCC------CcEEEEEcccCCCccceeeec--
Q 018293 142 ----SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH-HSPQILLSGSFD------RSVVMKDARISTHSGFKWAVA-- 208 (358)
Q Consensus 142 ----~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~-- 208 (358)
..+..|.+||+.+++... +..+...+..+.|+| ++ ..++....+ ..|.++|........ .....
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~ 237 (388)
T 3pe7_A 161 FYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHAEG 237 (388)
T ss_dssp HGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCCTT
T ss_pred hhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCC-CEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCCCC
Confidence 234679999999886544 444667789999999 88 666666543 378888876554433 22222
Q ss_pred CCeeeEEEcCCCCCeEEEEecCC----eEEEEEcccCCCCCCCCCCCccEEEeecCC---ceeEEEecCCCCcEEEEE--
Q 018293 209 ADVESLAWDPHAEHSFVVSLEDG----TIKGFDIRTAKSDPDSTSQQSSFTLHAHDK---AVCTISYNPLVPNLLATG-- 279 (358)
Q Consensus 209 ~~i~~~~~~~~~~~~~~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~---~i~~i~~~~~~~~~l~~~-- 279 (358)
..+...+|+|++..+++++..++ .|++||+.+++. ..+..+..+.. ....+.|+|+|..++++.
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 310 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-------RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQD 310 (388)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-------EEEEEECCEEEEEECTTSSEEEEEECCC------
T ss_pred cccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-------EEEEcCCCceeeeecCCCCeEccCCCcceeEeee
Confidence 24778899998776655555433 399999987631 22222222100 012237899984444332
Q ss_pred ------eCCCcEEEEecCCCCceeeEecCCCCc-----------eeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 280 ------STDKMVKLWDLSNNQPSCIASRNPKAG-----------AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 280 ------~~dg~i~i~d~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
..+..|++||+.+++...+. .+.. .+.+++|+|||+.++.++..+|...+|.+.-
T Consensus 311 ~~~~~~~~~~~i~~~d~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 311 DSGYKIENDPFLYVFNMKNGTQHRVA---RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp ------CCCCEEEEEETTTTEEEEEE---ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred ccccccCCCCEEEEEeccCCceEEec---cccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 44668999999987643332 2333 4677899999998777777788777776653
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=2.6e-21 Score=162.69 Aligned_cols=233 Identities=11% Similarity=0.053 Sum_probs=164.3
Q ss_pred ceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcc-cEEEEecCCCCCcEEEEEEcC
Q 018293 66 NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD-SVLGLAWNKEFRNILASASAD 144 (358)
Q Consensus 66 ~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d 144 (358)
++|++++.++.|++||..+++...... .++.. .+..++|+|++..+++++..+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~--------------------------~~~~~~~~~~~~~s~dg~~l~v~~~~~ 55 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVIT--------------------------IADAGPTPMVPMVAPGGRIAYATVNKS 55 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEE--------------------------CTTCTTCCCCEEECTTSSEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEE--------------------------cCCCCCCccceEEcCCCCEEEEEeCCC
Confidence 478999999999999997654332211 01222 477899999965566677778
Q ss_pred CeEEEEECCCCceeeeeccc-----ccceeeEEEcCCCCcEEEEEe------------CCCcEEEEEcccCCCccceeee
Q 018293 145 KQVKIWDVAAGKCNLTLEHH-----TDKVQAVAWNHHSPQILLSGS------------FDRSVVMKDARISTHSGFKWAV 207 (358)
Q Consensus 145 g~v~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~ 207 (358)
+.|.+||+.+++.+..+... ...+..++|+|++ +.+++++ .++.|.+||+.+++... ....
T Consensus 56 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~~ 133 (337)
T 1pby_B 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK-AFEA 133 (337)
T ss_dssp TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-EEEC
T ss_pred CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEE-EEeC
Confidence 99999999999887766531 2267889999999 6677775 57999999998766544 2334
Q ss_pred cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC----
Q 018293 208 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---- 283 (358)
Q Consensus 208 ~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg---- 283 (358)
...+..++|+|++. .++++ ++.|.+||+.++ .....+..+.. ...+.|+|++..+++++..++
T Consensus 134 ~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~---------~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~ 200 (337)
T 1pby_B 134 PRQITMLAWARDGS-KLYGL--GRDLHVMDPEAG---------TLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMAT 200 (337)
T ss_dssp CSSCCCEEECTTSS-CEEEE--SSSEEEEETTTT---------EEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEE
T ss_pred CCCcceeEECCCCC-EEEEe--CCeEEEEECCCC---------cEeeeeecccc-CCCceeCCCccEEeeeccCCCceee
Confidence 56688999999765 45555 689999999876 44444443331 113378898843333333333
Q ss_pred -------------------cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 284 -------------------MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 284 -------------------~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
.|.+||+.+++.. ......+...+.+++|+|++++ ++++ ++.|.+||+.+++.+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~v~~~d~~~~~~~~~ 275 (337)
T 1pby_B 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKNASIKR 275 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTTEEEEE
T ss_pred eeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCE-EEEe--CCeEEEEECCCCcCcce
Confidence 4689999998754 4444556667889999999996 5545 68999999998876544
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=2.9e-20 Score=158.18 Aligned_cols=241 Identities=12% Similarity=0.084 Sum_probs=155.0
Q ss_pred cccCCCceEEecCCCCeEEEEEcc-cccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCc-E
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLD-VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN-I 137 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~ 137 (358)
+|+|+|++|++++.+ .|.+|++. +++..... ....+ +.+.+++|+|++.. +
T Consensus 46 a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~-------------------------~~~~~-g~~~~~~~spdg~~l~ 98 (365)
T 1jof_A 46 TFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA-------------------------SHPIG-GHPRANDADTNTRAIF 98 (365)
T ss_dssp EECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE-------------------------EEECC-SSGGGGCTTSCCEEEE
T ss_pred EECCCCCEEEEEccc-eEEEEEECCCCCEEEee-------------------------EeecC-CCCccEEECCCCCEEE
Confidence 449999999988887 99999986 33221100 00001 12456899999443 3
Q ss_pred EEEEE-------------cCCeEEEEECC-CCceeeeec----ccccceeeEEEcCCCCcEEEEEe-CCCcEEEEEcc-c
Q 018293 138 LASAS-------------ADKQVKIWDVA-AGKCNLTLE----HHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDAR-I 197 (358)
Q Consensus 138 l~s~~-------------~dg~v~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~-~ 197 (358)
++++. .+|.+.+|++. +++....+. .+...+.+++|+|+| ++++++. .++.|.+||+. +
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~ 177 (365)
T 1jof_A 99 LLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLAS 177 (365)
T ss_dssp EEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTT
T ss_pred EEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCC
Confidence 44543 68999999997 465544443 245678999999999 6666655 46899999998 5
Q ss_pred CCCccc-eee---ecCCeeeEEEcCCCCCeEEEEe-cCCeEEEEEcccCCCCCCCCCCCcc---EEEe-------ecCC-
Q 018293 198 STHSGF-KWA---VAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSS---FTLH-------AHDK- 261 (358)
Q Consensus 198 ~~~~~~-~~~---~~~~i~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~-------~~~~- 261 (358)
++.... ... +...+..++|+|++. ++++++ .++.|.+|++..... ... ..+. +|..
T Consensus 178 g~~~~~~~~~~~~~g~~p~~~~~spdg~-~l~v~~~~~~~v~v~~~~~~~g-------~~~~~~~~~~~~~~~~~g~~~~ 249 (365)
T 1jof_A 178 GEVELVGSVDAPDPGDHPRWVAMHPTGN-YLYALMEAGNRICEYVIDPATH-------MPVYTHHSFPLIPPGIPDRDPE 249 (365)
T ss_dssp SCEEEEEEEECSSTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTTC-------CEEEEEEEEESSCTTCCCBCTT
T ss_pred CCEEEeeeEecCCCCCCCCEeEECCCCC-EEEEEECCCCeEEEEEEeCCCC-------cEEEccceEEcCCCCcCCcccc
Confidence 543221 111 245688999999765 555554 578999998763210 111 1111 1222
Q ss_pred -----ceeEEE-ecCCCCcEEEEEeCC-C-----cEEEEecC-CCCceeeEe-cCCCCceeEEEEEcC---CCCeEEEEE
Q 018293 262 -----AVCTIS-YNPLVPNLLATGSTD-K-----MVKLWDLS-NNQPSCIAS-RNPKAGAVFSVAFSE---DSPFVLAIG 324 (358)
Q Consensus 262 -----~i~~i~-~~~~~~~~l~~~~~d-g-----~i~i~d~~-~~~~~~~~~-~~~~~~~v~~~~~~~---~~~~~l~~~ 324 (358)
.+..++ |+|+| ++|+++..+ + .|.+|++. +++...+.. ...+...+..++|+| +|++ |+++
T Consensus 250 ~~~~~~~~~i~~~spdG-~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~-l~v~ 327 (365)
T 1jof_A 250 TGKGLYRADVCALTFSG-KYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEW-MAIT 327 (365)
T ss_dssp TSSBSEEEEEEEECTTS-SEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTE-EEEE
T ss_pred cccccccccEEEECCCC-CEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCE-EEEE
Confidence 478999 99999 666665532 3 89999996 455322211 222334456789999 8997 5555
Q ss_pred c-cCCeEEEEEccCC
Q 018293 325 G-SKGKLEIWDTLSD 338 (358)
Q Consensus 325 ~-~dg~i~vw~~~~~ 338 (358)
+ .++.|.+|++...
T Consensus 328 ~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 328 DDQEGWLEIYRWKDE 342 (365)
T ss_dssp CSSSCEEEEEEEETT
T ss_pred EcCCCeEEEEEEchh
Confidence 5 4599999999765
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.9e-20 Score=173.56 Aligned_cols=296 Identities=12% Similarity=0.060 Sum_probs=186.3
Q ss_pred CcccCCCcEEEEEEecCC----CceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCe
Q 018293 1 MTINPNDAVIVCARNEDD----VSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPA 76 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~ 76 (358)
++|||+|+.|+.+...+. ...-.+++|+...+.. .... .+..... .++|||||++||.+. ++.
T Consensus 65 ~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~---~~~~--~l~~~~~-------~~~~SPDG~~la~~~-~~~ 131 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF---VRGN--ELPRPIQ-------YLCWSPVGSKLAYVY-QNN 131 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE---CCSS--CCCSSBC-------CEEECSSTTCEEEEE-TTE
T ss_pred EEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc---ccce--ecCcccc-------cceECCCCCEEEEEE-CCe
Confidence 368999999998865210 0123889999876521 0000 1111222 345599999999986 789
Q ss_pred EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCccc---------EEEEecCCCCCcEEEEEEcCC--
Q 018293 77 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS---------VLGLAWNKEFRNILASASADK-- 145 (358)
Q Consensus 77 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~~l~s~~~dg-- 145 (358)
|++|++.+++.... ... ......+.+|... ..+++|+|+ ++.|++++.|.
T Consensus 132 i~~~~~~~g~~~~l--~~~----------------~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD-G~~la~~~~d~~~ 192 (719)
T 1z68_A 132 IYLKQRPGDPPFQI--TFN----------------GRENKIFNGIPDWVYEEEMLATKYALWWSPN-GKFLAYAEFNDTD 192 (719)
T ss_dssp EEEESSTTSCCEEC--CCC----------------CBTTTEEESSCCHHHHHHTTCSSCCEEECTT-SSEEEEEEEECTT
T ss_pred EEEEeCCCCCcEEE--ecC----------------CCcCCeEcccccceeeeecccCcccEEECCC-CCEEEEEEECCCC
Confidence 99999986543210 000 0000011233222 258999999 56888877652
Q ss_pred --------------------------------eEEEEECCCCcee--------eeecccccceeeEEEcCCCCcEEEEEe
Q 018293 146 --------------------------------QVKIWDVAAGKCN--------LTLEHHTDKVQAVAWNHHSPQILLSGS 185 (358)
Q Consensus 146 --------------------------------~v~iwd~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~l~~~~ 185 (358)
.|++||+.+++.. ..+.+|...+..++|+|++ +++++..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~ 271 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWL 271 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEe
Confidence 7899999988653 2234578889999999997 7776644
Q ss_pred CC----CcEEEEE----cccCCCccce----eeecCCee-----eEEEcCCCCCeEE-EEecCC--eEEEEEcccCCCCC
Q 018293 186 FD----RSVVMKD----ARISTHSGFK----WAVAADVE-----SLAWDPHAEHSFV-VSLEDG--TIKGFDIRTAKSDP 245 (358)
Q Consensus 186 ~d----g~i~i~d----~~~~~~~~~~----~~~~~~i~-----~~~~~~~~~~~~~-~~~~dg--~i~i~d~~~~~~~~ 245 (358)
.. ..|.+|| ..+++..... ..+...+. .+.|+|++..+++ ++..+| .|.+||+..+
T Consensus 272 ~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~---- 347 (719)
T 1z68_A 272 KRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE---- 347 (719)
T ss_dssp ESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST----
T ss_pred ccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC----
Confidence 33 2488899 7776655544 34555566 8899998775555 344556 4666666544
Q ss_pred CCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC----CCcEEEEecCC--CCceeeEecC----CCCceeEEEEEcC
Q 018293 246 DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST----DKMVKLWDLSN--NQPSCIASRN----PKAGAVFSVAFSE 315 (358)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~----dg~i~i~d~~~--~~~~~~~~~~----~~~~~v~~~~~~~ 315 (358)
. ...+..+...+..+.+. ++..+++++.. ++..++|.+.. +.. ....+. ++...+..+.|+|
T Consensus 348 -----~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~l~~~~~~~~~~~~~~~~s~ 419 (719)
T 1z68_A 348 -----N-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPP-SKKCVTCHLRKERCQYYTASFSD 419 (719)
T ss_dssp -----T-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSC-CEEESSTTTTTTTBCBEEEEECG
T ss_pred -----c-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCC-CceeccCccCCCCCceEEEEECC
Confidence 2 34455555667777777 77444445544 47888888764 321 112222 2556788899999
Q ss_pred CCCeEEEEEccC--CeEEEEEccCCCcc
Q 018293 316 DSPFVLAIGGSK--GKLEIWDTLSDAGI 341 (358)
Q Consensus 316 ~~~~~l~~~~~d--g~i~vw~~~~~~~~ 341 (358)
++++++++++.. ..+.+||+.+++.+
T Consensus 420 dg~~l~~~~s~~~~p~~~l~d~~~g~~~ 447 (719)
T 1z68_A 420 YAKYYALVCYGPGIPISTLHDGRTDQEI 447 (719)
T ss_dssp GGSSEEEEECCBSSCEEEEECSSSCCEE
T ss_pred CCCEEEEEcCCCCCCeEEEEECCCCCEE
Confidence 999766665544 57889999887643
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=8.1e-19 Score=149.08 Aligned_cols=279 Identities=9% Similarity=0.087 Sum_probs=162.0
Q ss_pred CcccCCCcEEEEEEecC-CCceEEEEEEeccCCCCCceEeeceee-cCCcccceeeecCCccccCCCceEEecC-CCCeE
Q 018293 1 MTINPNDAVIVCARNED-DVSHLEVYILEESDGGDPNLYVHHHII-IPAFPLCMAWLDCPLKDREKGNFMAVGS-MEPAI 77 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i 77 (358)
|+|+|+++.|+++..++ ..+.+.+|.++...+ .+....... ....+.. +++ ++++|++++ .++.|
T Consensus 55 l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g---~~~~~~~~~~~~~~p~~-------~~~--dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 55 LIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG---TLHLLNTQKTMGADPCY-------LTT--NGKNIVTANYSGGSI 122 (361)
T ss_dssp EEECTTSSEEEEEECCSSTTCEEEEEEEETTTT---EEEEEEEEECSSSCEEE-------EEE--CSSEEEEEETTTTEE
T ss_pred EEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC---cEEEeeEeccCCCCcEE-------EEE--CCCEEEEEECCCCEE
Confidence 47899999998886642 125666666665433 222111111 1112222 222 777776665 67899
Q ss_pred EEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce
Q 018293 78 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC 157 (358)
Q Consensus 78 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 157 (358)
.+|++............... . ..-......+...+.+++|+|++..++++...++.|.+|++.....
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~----------~---g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~ 189 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEF----------K---GSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNAN 189 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEEC----------C---CCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCC
T ss_pred EEEEeCCCCcCcccceeEEc----------c---CCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCC
Confidence 99999754333211100000 0 0000001123445789999999544555555689999999875431
Q ss_pred ------e-------eeecccccceeeEEEcCCCCcEEEEEe-CCCcEEEEEcccCCCcccee-----eecCCeeeEEEcC
Q 018293 158 ------N-------LTLEHHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARISTHSGFKW-----AVAADVESLAWDP 218 (358)
Q Consensus 158 ------~-------~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~-----~~~~~i~~~~~~~ 218 (358)
+ .........+..++|+|++ +++++++ .++.|.+||+.+++...... ........++|+|
T Consensus 190 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp 268 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG-KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP 268 (361)
T ss_dssp TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT
T ss_pred cccccceeecccccceecCCCCCCeEEEEcCCC-CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC
Confidence 1 1112234567899999999 6665555 68999999998654321111 1123467999999
Q ss_pred CCCCeEEEEe-c-CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe-CCCcEEEEec--CCC
Q 018293 219 HAEHSFVVSL-E-DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLWDL--SNN 293 (358)
Q Consensus 219 ~~~~~~~~~~-~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~d~--~~~ 293 (358)
++. +++++. . ++.|.+|++...... ...+..+.. ...+..++|+|++ ++|++++ .++.|.+|++ .++
T Consensus 269 dg~-~l~v~~~~~~~~i~v~~~~~~~g~-----~~~~~~~~~-g~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 269 DGK-YLYASNRLKADGVAIFKVDETNGT-----LTKVGYQLT-GIHPRNFIITPNG-KYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp TSS-EEEEEECSSSCEEEEEEECTTTCC-----EEEEEEEEC-SSCCCEEEECTTS-CEEEEEETTTTEEEEEEECTTTC
T ss_pred CCC-EEEEECCCCCCEEEEEEEcCCCCc-----EEEeeEecC-CCCCceEEECCCC-CEEEEEECCCCCEEEEEEECCCC
Confidence 765 555544 4 589999999632100 023333443 4567899999999 6666666 6788999655 455
Q ss_pred CceeeEecCCCCceeEEEEEc
Q 018293 294 QPSCIASRNPKAGAVFSVAFS 314 (358)
Q Consensus 294 ~~~~~~~~~~~~~~v~~~~~~ 314 (358)
+...+. ...+...+.|+.|.
T Consensus 341 ~~~~~~-~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 341 LLTDIK-KDIKVDKPVCLKFV 360 (361)
T ss_dssp CEEECS-CCEECSSEEEEEEE
T ss_pred cEeecc-eeeeCCCCeEEEEc
Confidence 522111 12233467888875
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=2.3e-19 Score=151.56 Aligned_cols=237 Identities=9% Similarity=0.084 Sum_probs=156.2
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCC--cccceeeecCCccccCCCceE-EecCCCCeE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPA--FPLCMAWLDCPLKDREKGNFM-AVGSMEPAI 77 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~i 77 (358)
+++++++.+++++..++ .+++|+...+ .... ....+. .+..+ +|+|+|+++ +++..++.|
T Consensus 5 ~~~~~~~~~~v~~~~~~-----~v~~~d~~~~---~~~~--~~~~~~~~~~~~~-------~~s~dg~~~~v~~~~~~~i 67 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPN-----NLHVVDVASD---TVYK--SCVMPDKFGPGTA-------MMAPDNRTAYVLNNHYGDI 67 (349)
T ss_dssp CCCCTTCEEEEEEETTT-----EEEEEETTTT---EEEE--EEECSSCCSSCEE-------EECTTSSEEEEEETTTTEE
T ss_pred ccccCCCEEEEEeCCCC-----eEEEEECCCC---cEEE--EEecCCCCCCcee-------EECCCCCEEEEEeCCCCcE
Confidence 46788899998887776 8999998765 2211 111222 23333 448999865 556678999
Q ss_pred EEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcC------------C
Q 018293 78 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD------------K 145 (358)
Q Consensus 78 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------------g 145 (358)
.+||+.+++......... ....+...+.+++|+|+ ++++++++.+ +
T Consensus 68 ~~~d~~t~~~~~~~~~~~---------------------~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~ 125 (349)
T 1jmx_B 68 YGIDLDTCKNTFHANLSS---------------------VPGEVGRSMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPP 125 (349)
T ss_dssp EEEETTTTEEEEEEESCC---------------------STTEEEECSSCEEECTT-SSEEEEEEEEEEECSSCEEECCC
T ss_pred EEEeCCCCcEEEEEEccc---------------------ccccccccccceEECCC-CCEEEEEcccccccccccccCCC
Confidence 999997654332111000 00001334788999999 5677777765 8
Q ss_pred eEEEEECCCCcee---eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeee---------------
Q 018293 146 QVKIWDVAAGKCN---LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV--------------- 207 (358)
Q Consensus 146 ~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--------------- 207 (358)
.|.+||+.+++.. ..+. +...+.+++|+|++ + +++++ +.|.+||+.+++........
T Consensus 126 ~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg-~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (349)
T 1jmx_B 126 RLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDG-S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYF 200 (349)
T ss_dssp EEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTS-C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCC
T ss_pred eEEEEECCCccccceeeecc-CCCcccceeECCCC-c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceee
Confidence 9999999885433 3333 34468899999999 5 45544 34999998776533211100
Q ss_pred -----------------------------------------------------cCCeeeEEEcC-CCCCeEEEEecCCeE
Q 018293 208 -----------------------------------------------------AADVESLAWDP-HAEHSFVVSLEDGTI 233 (358)
Q Consensus 208 -----------------------------------------------------~~~i~~~~~~~-~~~~~~~~~~~dg~i 233 (358)
...+..++|+| ++. +++++ ++.|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v 277 (349)
T 1jmx_B 201 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRL 277 (349)
T ss_dssp CCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEE
T ss_pred ecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeE
Confidence 01345667778 655 66666 8899
Q ss_pred EEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc
Q 018293 234 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 295 (358)
Q Consensus 234 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 295 (358)
.+||+.++ +....+.. ...+.+++|+|++ ++|++++.++.|.+||+.+++.
T Consensus 278 ~~~d~~~~---------~~~~~~~~-~~~~~~~~~s~dg-~~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 278 AKYDLKQR---------KLIKAANL-DHTYYCVAFDKKG-DKLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp EEEETTTT---------EEEEEEEC-SSCCCEEEECSSS-SCEEEESBSSEEEEEETTTTEE
T ss_pred EEEECccC---------eEEEEEcC-CCCccceEECCCC-CEEEEecCCCeEEEEeccccce
Confidence 99999876 44444443 3457899999998 6666678889999999988774
No 163
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=2.3e-19 Score=154.28 Aligned_cols=295 Identities=11% Similarity=0.008 Sum_probs=170.3
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
++|+|+|+.|+.+...+ +...+|+++...+....+..+. ..... .+.|+|||++|+.++.++.|++|
T Consensus 41 ~~~SpdG~~l~~~~~~~--g~~~l~~~d~~~~~~~~l~~~~-----~~~~~------~~~~spdg~~l~~~~~~~~l~~~ 107 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFD--GNRNYYLLNLETQQAVQLTEGK-----GDNTF------GGFISTDERAFFYVKNELNLMKV 107 (396)
T ss_dssp CCBCTTSCEEEEEECTT--SSCEEEEEETTTTEEEECCCSS-----CBCTT------TCEECTTSSEEEEEETTTEEEEE
T ss_pred CcCCCCCCEEEEEEecC--CCceEEEEECCCCcEEEeecCC-----CCccc------cceECCCCCEEEEEEcCCcEEEE
Confidence 36899999998886653 3446788887664211111111 01111 13459999999999989999999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCc----ccEEEEecCCCCCcEEEEE-----EcCCeEEEEE
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT----DSVLGLAWNKEFRNILASA-----SADKQVKIWD 151 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~l~s~-----~~dg~v~iwd 151 (358)
|+.+++.............. .... .+.... .....+.|+|++ ..++.+ ..+..|.+||
T Consensus 108 d~~~~~~~~~~~~~~~~~~~-----------g~~l-~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~l~~~d 174 (396)
T 3c5m_A 108 DLETLEEQVIYTVDEEWKGY-----------GTWV-ANSDCTKLVGIEILKRDWQPLT-SWEKFAEFYHTNPTCRLIKVD 174 (396)
T ss_dssp ETTTCCEEEEEECCTTEEEE-----------EEEE-ECTTSSEEEEEEEEGGGCCCCC-SHHHHHHHHHTCCCEEEEEEE
T ss_pred ECCCCCcEEEEecccccCCC-----------CCEE-EeccCCccccccccccccCCCC-cceeeeeeccCCCcceEEEEE
Confidence 99765432111100000000 0000 000000 001125688884 444433 3567899999
Q ss_pred CCCCceeeeecccccceeeEEEcC-CCCcEEEEEeCC------CcEEEEEcccCCCccceeee-cCCeeeEEEcCCCCCe
Q 018293 152 VAAGKCNLTLEHHTDKVQAVAWNH-HSPQILLSGSFD------RSVVMKDARISTHSGFKWAV-AADVESLAWDPHAEHS 223 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~ 223 (358)
+.+++..... .+...+..+.|+| ++ ..++..+.+ ..|.+||+...+........ ...+..++|+|++..+
T Consensus 175 ~~~g~~~~~~-~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 175 IETGELEVIH-QDTAWLGHPIYRPFDD-STVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAM 252 (396)
T ss_dssp TTTCCEEEEE-EESSCEEEEEEETTEE-EEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCE
T ss_pred CCCCcEEeec-cCCcccccceECCCCC-CEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEE
Confidence 9988765444 4667789999999 66 555555443 36888888655433222211 2247788999977655
Q ss_pred EEEEecC----CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecC-CCCcEEEEEe----------------CC
Q 018293 224 FVVSLED----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP-LVPNLLATGS----------------TD 282 (358)
Q Consensus 224 ~~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~~l~~~~----------------~d 282 (358)
++++..+ +.|++||+.++ ... .+..... .. +.|+| ++ .+++.++ .+
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g---------~~~-~l~~~~~-~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~~~~~~ 319 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETL---------ENE-EVMVMPP-CS-HLMSNFDG-SLMVGDGCDAPVDVADADSYNIEND 319 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTC---------CEE-EEEECCS-EE-EEEECSSS-SEEEEEECCC----------CCCCC
T ss_pred EEEecCCCCccceEEEEECCCC---------CeE-EeeeCCC-CC-CCccCCCC-ceEEEecCCcceeeccccccccCCC
Confidence 5544332 44999999865 221 2221222 23 88999 88 6776654 24
Q ss_pred CcEEEEecCCCCceeeEecCCCC--------ceeEEEEEcCCCCeEEEEEccCCeEEEEEcc
Q 018293 283 KMVKLWDLSNNQPSCIASRNPKA--------GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 283 g~i~i~d~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
..|++||+.+++...+......- ..+..++|+|+|+++++++..++...+|.+.
T Consensus 320 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 320 PFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 67999999887643332221100 0245678999999766665556665555543
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=1.5e-19 Score=167.70 Aligned_cols=246 Identities=12% Similarity=0.145 Sum_probs=155.9
Q ss_pred CccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcE
Q 018293 58 PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 137 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 137 (358)
+++|+|||++++++ ||.|++||+.+++.... +.+ .....+......++|||+ +++
T Consensus 21 ~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~---~~~-------------------~~~~~~~~~~~~~~~Spd-g~~ 75 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ--ENNILVFNAEYGNSSVF---LEN-------------------STFDEFGHSINDYSISPD-GQF 75 (740)
T ss_dssp CEEECSSSEEEEEE--TTEEEEEETTTCCEEEE---ECT-------------------TTTTTCCSCCCEEEECTT-SSE
T ss_pred ccEECCCCcEEEEc--CCcEEEEECCCCceEEE---Eec-------------------hhhhhhcccccceEECCC-CCE
Confidence 34458999999987 89999999987654211 110 000112222345788999 567
Q ss_pred EEEEEcC---------CeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-ee
Q 018293 138 LASASAD---------KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AV 207 (358)
Q Consensus 138 l~s~~~d---------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~ 207 (358)
|+.++.+ +.+.+||+++++.. .+..+...+...+|+||| +.|+.+ .++.|++||+.+++...... ..
T Consensus 76 l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG-~~la~~-~~~~i~~~~~~~~~~~~lt~~g~ 152 (740)
T 4a5s_A 76 ILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVG-HKLAYV-WNNDIYVKIEPNLPSYRITWTGK 152 (740)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSST-TCEEEE-ETTEEEEESSTTSCCEECCSCCB
T ss_pred EEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCC-CEEEEE-ECCeEEEEECCCCceEEEcCCCC
Confidence 8888776 56679999998754 456677889999999999 667666 47899999998766443221 11
Q ss_pred c-----------------CCeeeEEEcCCCCCeEEEEe-cCC-----------------------------------eEE
Q 018293 208 A-----------------ADVESLAWDPHAEHSFVVSL-EDG-----------------------------------TIK 234 (358)
Q Consensus 208 ~-----------------~~i~~~~~~~~~~~~~~~~~-~dg-----------------------------------~i~ 234 (358)
. .....+.|+||+. .|+... .++ .|+
T Consensus 153 ~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~ 231 (740)
T 4a5s_A 153 EDIIYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFF 231 (740)
T ss_dssp TTTEEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEE
T ss_pred ccceecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEE
Confidence 1 1224589999766 555543 323 466
Q ss_pred EEEccc---CCCCCCCCCCCccEEEe------ecCCceeEEEecCCCCcEEEEEeC----CCcEEEEecCCCCc------
Q 018293 235 GFDIRT---AKSDPDSTSQQSSFTLH------AHDKAVCTISYNPLVPNLLATGST----DKMVKLWDLSNNQP------ 295 (358)
Q Consensus 235 i~d~~~---~~~~~~~~~~~~~~~~~------~~~~~i~~i~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~------ 295 (358)
+||+.+ +.. .....+. +|...+..++|+||+ ++++.... +..|.+||+.+++.
T Consensus 232 v~d~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~wspdg-~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~ 303 (740)
T 4a5s_A 232 VVNTDSLSSVTN-------ATSIQITAPASMLIGDHYLCDVTWATQE-RISLQWLRRIQNYSVMDICDYDESSGRWNCLV 303 (740)
T ss_dssp EEETTSCCSSSC-------CCEEEECCCHHHHTSCEEEEEEEEEETT-EEEEEEEESSTTEEEEEEEEEETTTTEEEECG
T ss_pred EEECCCCCCCCc-------ceEEEecCCccCCCCCeEEEEEEEeCCC-eEEEEEeCCCCCEEEEEEEECCCCccccceeE
Confidence 666665 310 0222333 267779999999998 65555433 23699999988761
Q ss_pred eeeEecCCCCceeE-----EEEEcCCCCeEEEEEc-cCC--eEEEEEccCCCc
Q 018293 296 SCIASRNPKAGAVF-----SVAFSEDSPFVLAIGG-SKG--KLEIWDTLSDAG 340 (358)
Q Consensus 296 ~~~~~~~~~~~~v~-----~~~~~~~~~~~l~~~~-~dg--~i~vw~~~~~~~ 340 (358)
........+...+. ...|+|||+.++...+ .+| .|++||+.+++.
T Consensus 304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 11111123444333 6789999996542443 444 688888876543
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=6.2e-19 Score=151.29 Aligned_cols=241 Identities=10% Similarity=0.011 Sum_probs=158.4
Q ss_pred ccccCCCceEEecCC-CCe--EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCC
Q 018293 59 LKDREKGNFMAVGSM-EPA--IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 135 (358)
Q Consensus 59 ~~~s~~~~~l~~g~~-dg~--i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 135 (358)
++|||||++|+.++. +|. |.+||+.+++... ...++...+..+.|+|+ +
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~---------------------------lt~~~~~~~~~~~~spd-g 92 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ---------------------------LTEGRGDNTFGGFLSPD-D 92 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE---------------------------CCCSSCBCSSSCEECTT-S
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE---------------------------eeeCCCCCccceEEcCC-C
Confidence 567999999998887 674 7777876543221 22245555556789999 6
Q ss_pred cEEEEEEcCCeEEEEECCCCceeeeecccccceeeEE--EcCCCCcEEEEE----------------------eCCCcEE
Q 018293 136 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVA--WNHHSPQILLSG----------------------SFDRSVV 191 (358)
Q Consensus 136 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~l~~~----------------------~~dg~i~ 191 (358)
+.|+.++.++.|.+||+.+++....+..+...+.... +++++ ..++.. ..+..|.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLM 171 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEE
Confidence 6888999899999999999987666665555554444 48888 666532 2346799
Q ss_pred EEEcccCCCccceeeecCCeeeEEEcC-CCCCeEEEEec------CCeEEEEEcccCCCCCCCCCCCccEEEeecC--Cc
Q 018293 192 MKDARISTHSGFKWAVAADVESLAWDP-HAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD--KA 262 (358)
Q Consensus 192 i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~ 262 (358)
+||+.+++... .......+..+.|+| ++. .++.... ...|.++|.... ....+..+. ..
T Consensus 172 ~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~----------~~~~l~~~~~~~~ 239 (388)
T 3pe7_A 172 RVDLKTGESTV-ILQENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDGT----------NMRKVKTHAEGES 239 (388)
T ss_dssp EEETTTCCEEE-EEEESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTSC----------CCEESCCCCTTEE
T ss_pred EEECCCCceEE-eecCCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCCC----------ceEEeeeCCCCcc
Confidence 99998876443 445667789999999 765 4544443 236777777643 223333333 35
Q ss_pred eeEEEecCCCCcEEEEEeCCC----cEEEEecCCCCceeeEecCCCCce---eEEEEEcCCCCeEEEEE--------ccC
Q 018293 263 VCTISYNPLVPNLLATGSTDK----MVKLWDLSNNQPSCIASRNPKAGA---VFSVAFSEDSPFVLAIG--------GSK 327 (358)
Q Consensus 263 i~~i~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~--------~~d 327 (358)
+..++|+|+|..+++++..++ .|++||+.+++...+.....+... ...+.|+|||+.++++. ..+
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 319 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEND 319 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCC
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCC
Confidence 778899999944444444333 399999999875555444431111 11137999999755433 456
Q ss_pred CeEEEEEccCCCc
Q 018293 328 GKLEIWDTLSDAG 340 (358)
Q Consensus 328 g~i~vw~~~~~~~ 340 (358)
..|++||+.+++.
T Consensus 320 ~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 320 PFLYVFNMKNGTQ 332 (388)
T ss_dssp CEEEEEETTTTEE
T ss_pred CEEEEEeccCCce
Confidence 7899999988654
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=1.6e-18 Score=145.25 Aligned_cols=237 Identities=18% Similarity=0.125 Sum_probs=168.6
Q ss_pred CccccCCCceEEecCCC------------------------CeEEEEEcccccCcCceeecCCcccccccccccCCceec
Q 018293 58 PLKDREKGNFMAVGSME------------------------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSS 113 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~d------------------------g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (358)
.++++++|+++++...+ +.|.+||..+++....
T Consensus 28 ~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~----------------------- 84 (329)
T 3fvz_A 28 GVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQS----------------------- 84 (329)
T ss_dssp EEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEE-----------------------
T ss_pred EEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEec-----------------------
Confidence 45568999999988877 3677777754433210
Q ss_pred cccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCc-eeeee---------cccccceeeEEEcC-CCCcEEE
Q 018293 114 IKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-CNLTL---------EHHTDKVQAVAWNH-HSPQILL 182 (358)
Q Consensus 114 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~~l~ 182 (358)
.-.++-..+..++++|+ ++++++...++.|++||..... .+..+ ..+-.....++++| ++ .+++
T Consensus 85 ---~~~~~~~~p~gia~d~~-g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv 159 (329)
T 3fvz_A 85 ---SGKNLFYLPHGLSIDTD-GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFV 159 (329)
T ss_dssp ---ECTTTCSSEEEEEECTT-SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEE
T ss_pred ---cCCCccCCceEEEECCC-CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEE
Confidence 11134467899999999 5588888889999999976442 44444 23344688999999 55 7777
Q ss_pred EEe-CCCcEEEEEcccCCCccceee----------ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCC
Q 018293 183 SGS-FDRSVVMKDARISTHSGFKWA----------VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQ 251 (358)
Q Consensus 183 ~~~-~dg~i~i~d~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~ 251 (358)
+.+ .++.|++||. .+........ ....+..++++|+++.++++...++.|++||..++ +
T Consensus 160 ~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G---------~ 229 (329)
T 3fvz_A 160 SDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK---------E 229 (329)
T ss_dssp EECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC---------C
T ss_pred EeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC---------c
Confidence 776 6899999994 3333322211 12347899999975778888888999999999865 4
Q ss_pred ccEEE--eecCCceeEEEecCCCCcEEEEEe-------CCCcEEEEecCCCCceeeEec---CCCCceeEEEEEcCCCCe
Q 018293 252 SSFTL--HAHDKAVCTISYNPLVPNLLATGS-------TDKMVKLWDLSNNQPSCIASR---NPKAGAVFSVAFSEDSPF 319 (358)
Q Consensus 252 ~~~~~--~~~~~~i~~i~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~ 319 (358)
.+..+ ..+...+..++++| + ..+.+.+ .+..|++||..+++. +..+ ..+......++++|+|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~- 304 (329)
T 3fvz_A 230 FVREIKHASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGT- 304 (329)
T ss_dssp EEEEECCTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSE-
T ss_pred EEEEEeccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCC-
Confidence 45554 23456788999999 3 3444333 345899999998874 3333 34566789999999995
Q ss_pred EEEEEccCCeEEEEEccC
Q 018293 320 VLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 320 ~l~~~~~dg~i~vw~~~~ 337 (358)
++++...++.|++|++..
T Consensus 305 lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEESSSCCEEEEEEEE
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 899999999999999865
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=8.2e-18 Score=138.09 Aligned_cols=241 Identities=12% Similarity=0.093 Sum_probs=164.4
Q ss_pred ccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecC-CCCCcE
Q 018293 59 LKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN-KEFRNI 137 (358)
Q Consensus 59 ~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~ 137 (358)
++++++++++++...++.|.+||.+ ++....... .....+|...+..+++. ++ +.+
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~---------------------~~~~~~~~~~p~~i~~~~~~-g~l 91 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGE---------------------CGKRDSQLLYPNRVAVVRNS-GDI 91 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECC---------------------BSSSTTCBSSEEEEEEETTT-TEE
T ss_pred EEECCCCCEEEEECCCCEEEEECCC-CcEEEEecc---------------------cCCCcccccCceEEEEEcCC-CeE
Confidence 3448899988888889999999976 222111000 00112355678999994 55 556
Q ss_pred EEEEEc-CCeEEEEECCCCceeeeec-ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee--eecCCeee
Q 018293 138 LASASA-DKQVKIWDVAAGKCNLTLE-HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW--AVAADVES 213 (358)
Q Consensus 138 l~s~~~-dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~ 213 (358)
+++... ++.|.+|| .+++.+..+. .+...+.++++++++ +++++...++.|.+||... +...... .....+..
T Consensus 92 ~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~ 168 (286)
T 1q7f_A 92 IVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNG 168 (286)
T ss_dssp EEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEE
T ss_pred EEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEE
Confidence 665543 89999999 5677666664 234568899999998 7777777889999999643 2222111 12345889
Q ss_pred EEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec--CCceeEEEecCCCCcEEEEEeCCC-cEEEEec
Q 018293 214 LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--DKAVCTISYNPLVPNLLATGSTDK-MVKLWDL 290 (358)
Q Consensus 214 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~~~i~~i~~~~~~~~~l~~~~~dg-~i~i~d~ 290 (358)
+++++++ +++++...++.|++||... ..+..+..+ ...+..++++|++ +++++...++ .|.+||.
T Consensus 169 i~~~~~g-~l~v~~~~~~~i~~~~~~g----------~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 169 VVVNDKQ-EIFISDNRAHCVKVFNYEG----------QYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp EEECSSS-EEEEEEGGGTEEEEEETTC----------CEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECT
T ss_pred EEECCCC-CEEEEECCCCEEEEEcCCC----------CEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECC
Confidence 9999964 4777777789999999743 334444332 3567899999998 7888877775 9999996
Q ss_pred CCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCc
Q 018293 291 SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 340 (358)
Q Consensus 291 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 340 (358)
. ++.............+.+++++|+|+ ++++ +.|+.|++|++.....
T Consensus 237 ~-g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 237 D-GQLISALESKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp T-SCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECSCCCC
T ss_pred C-CCEEEEEcccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEcccccc
Confidence 4 44222222222233478999999997 6776 5689999999866443
No 168
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.82 E-value=2.8e-17 Score=151.86 Aligned_cols=290 Identities=10% Similarity=0.017 Sum_probs=182.8
Q ss_pred cCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCC-----eEE
Q 018293 4 NPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP-----AIE 78 (358)
Q Consensus 4 ~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-----~i~ 78 (358)
.|+|..++....++....-.+|..+...+. ..+....+...... .+.-..++|||||++||.+..++ .|+
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~lld~~~l~~~~----~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~ 154 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGE-ARVFLDPNILSDDG----TVALRGYAFSEDGEYFAYGLSASGSDWVTIK 154 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSC-CEEEECGGGGCTTS----CEEEEEEEECTTSSEEEEEEEETTCSCEEEE
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCC-cEEEECHHHhccCC----CEEEEEEEECCCCCEEEEEEcCCCCceEEEE
Confidence 478888888866553333366776654332 22222211111110 01111345699999999765433 899
Q ss_pred EEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCe------------
Q 018293 79 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ------------ 146 (358)
Q Consensus 79 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~------------ 146 (358)
+||+.+++..... + ....+..++|+|+ ++.|+.++.++.
T Consensus 155 v~d~~tg~~~~~~--------------------------~--~~~~~~~~~wspD-g~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 155 FMKVDGAKELPDV--------------------------L--ERVKFSCMAWTHD-GKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEETTTTEEEEEE--------------------------E--EEECSCCEEECTT-SSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEECCCCCCCccc--------------------------c--cCcccceEEEEeC-CCEEEEEEECCccccccccccccC
Confidence 9999875543210 0 1123668999999 567777777765
Q ss_pred ----EEEEECCCCce----eeeecccccceeeEEEcCCCCcEEEEEeC-----CCcEEEEEccc------CC-Cccceee
Q 018293 147 ----VKIWDVAAGKC----NLTLEHHTDKVQAVAWNHHSPQILLSGSF-----DRSVVMKDARI------ST-HSGFKWA 206 (358)
Q Consensus 147 ----v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~------~~-~~~~~~~ 206 (358)
|.+|++.+++. +.....+...+..+.|+|++ ++|+.++. +..|.+||+.+ +. .......
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG-RYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC-CEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 99999988763 22223345567899999999 66665543 56899999986 43 2332333
Q ss_pred ecCCeeeEEEcCCCCCeEEEEecC---CeEEEEEcccCCCCCCCCCCCccEEEeecCC--ceeEEEecCCCCcEEEEEeC
Q 018293 207 VAADVESLAWDPHAEHSFVVSLED---GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK--AVCTISYNPLVPNLLATGST 281 (358)
Q Consensus 207 ~~~~i~~~~~~~~~~~~~~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~i~~i~~~~~~~~~l~~~~~ 281 (358)
+...+.. .|+|++..+++.+..+ +.|.+||+.+... .....+..|.. .+..+.|++++ .++++...
T Consensus 285 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~ 355 (710)
T 2xdw_A 285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE-------SKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLH 355 (710)
T ss_dssp SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG-------GGCEEEECCCSSCEEEEEEEETTT-EEEEEEEE
T ss_pred CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc-------ccceeccCCCCCCeEEEEEEEcCC-EEEEEEEE
Confidence 3444443 4778666555555433 3799999876521 12345555543 68889998765 78888888
Q ss_pred CCc--EEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEc---cCCeEEEEEccCCC
Q 018293 282 DKM--VKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG---SKGKLEIWDTLSDA 339 (358)
Q Consensus 282 dg~--i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~vw~~~~~~ 339 (358)
++. |.+||+.+++ ....+..+.+.+..+.++|++..++++.+ ..+.|+.||+.+++
T Consensus 356 ~g~~~l~~~~~~~g~--~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 356 DVKNTLQLHDLATGA--LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTTCC--EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCCCC--EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 885 5667775665 34445556778999999999876555443 34789999998876
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=3e-17 Score=139.01 Aligned_cols=289 Identities=10% Similarity=0.066 Sum_probs=177.1
Q ss_pred CCCcEEEEEEecCC-CceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecC----------C
Q 018293 5 PNDAVIVCARNEDD-VSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS----------M 73 (358)
Q Consensus 5 p~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~----------~ 73 (358)
|+++.+++.....+ ...-.+++|+...+ .+.. ...... .| .++|+|||++|+++. .
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~---~~~~--~i~~g~-------~p-~i~~spdg~~lyv~~~~~~~~~~g~~ 79 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNG---KFLG--MVPTAF-------NG-HVQVSNDGKKIYTMTTYHERITRGKR 79 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTC---CEEE--EEECCE-------EE-EEEECTTSSEEEEEEEEETTSSSSCE
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCC---eEEE--EecCCC-------CC-ceEECCCCCEEEEEEecccccccCCC
Confidence 35666666642110 11227889987665 2221 122221 22 345699999999876 3
Q ss_pred CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc--CCeEEEEE
Q 018293 74 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKIWD 151 (358)
Q Consensus 74 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~--dg~v~iwd 151 (358)
++.|.+||..+.+......+... ...+......++++|+ +++|+++.. +++|.+||
T Consensus 80 ~~~v~v~d~~t~~~~~~i~~~~~---------------------~~~~g~~p~~i~~spd-g~~l~v~n~~~~~~v~v~d 137 (361)
T 2oiz_A 80 SDVVEVWDADKLTFEKEISLPPK---------------------RVQGLNYDGLFRQTTD-GKFIVLQNASPATSIGIVD 137 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEECTT---------------------BCCBCCCGGGEEECTT-SSEEEEEEESSSEEEEEEE
T ss_pred CCEEEEEECcCCcEEEEEEcCcc---------------------ccccCCCcceEEECCC-CCEEEEECCCCCCeEEEEE
Confidence 67899999876555443322110 0012345678899999 557776654 68999999
Q ss_pred CCCCceeee-ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc-ce-----eeecCCeeeEEEcCCCCCeE
Q 018293 152 VAAGKCNLT-LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FK-----WAVAADVESLAWDPHAEHSF 224 (358)
Q Consensus 152 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~-----~~~~~~i~~~~~~~~~~~~~ 224 (358)
+.+++.+.. +... . ...+.+.|++...+++.+.||.+.+|+........ .. .........+.+.+++ ..+
T Consensus 138 ~~~~~~~~~~i~~~-~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~ 214 (361)
T 2oiz_A 138 VAKGDYVEDVTAAA-G-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK-DKA 214 (361)
T ss_dssp TTTTEEEEEEGGGT-T-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS-SEE
T ss_pred CCCCcEEEEEecCC-C-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC-CEE
Confidence 999988877 6532 2 23356788776788899999999999986532211 00 0011111122334544 355
Q ss_pred EEEecCCeEEEEEcccCCCCCCCCCCCccEEEee------c----CCceeEEEecCCCCcEEEEEe----------CCCc
Q 018293 225 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA------H----DKAVCTISYNPLVPNLLATGS----------TDKM 284 (358)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~------~----~~~i~~i~~~~~~~~~l~~~~----------~dg~ 284 (358)
+..+.++.+.++|+..... .....+.. + ......++++|++..++++.. ..+.
T Consensus 215 ~~~~~~~~v~v~d~~~~~~-------~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~ 287 (361)
T 2oiz_A 215 HFVSYYGNVYSADFSGDEV-------KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAE 287 (361)
T ss_dssp EEEBTTSEEEEEECSSSSC-------EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSE
T ss_pred EEEeCCCeEEEEEecCCCc-------eecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCce
Confidence 5666789999999875421 11111110 0 011123789999844444443 1347
Q ss_pred EEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC--Cccccc
Q 018293 285 VKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD--AGISNR 344 (358)
Q Consensus 285 i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~ 344 (358)
|.+||+.+.+ .+..+..+. +.+++|+|+|++ |++++. +.|.+||..++ +.+.+.
T Consensus 288 v~viD~~t~~--~v~~i~~~~--p~~ia~spdg~~-l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 288 IWVMDTKTKQ--RVARIPGRD--ALSMTIDQQRNL-MLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp EEEEETTTTE--EEEEEECTT--CCEEEEETTTTE-EEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred EEEEECCCCc--EEEEEecCC--eeEEEECCCCCE-EEEeCC-CeEEEEECCCCcceeeEEe
Confidence 9999999987 445555554 889999999996 555555 99999999999 777654
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=2e-17 Score=140.58 Aligned_cols=241 Identities=9% Similarity=0.031 Sum_probs=150.3
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEecc-CCCCCceEeeceeecCCcccceeeecCCccccCCCce--EEecC-----
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEES-DGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF--MAVGS----- 72 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~--l~~g~----- 72 (358)
++++|+++.|+++..+ .+.+|+.. .+ .+...........+ +.++|+|+|++ ++++.
T Consensus 45 ~a~spdg~~l~~~~~~------~v~~~~~~~~g---~~~~~~~~~~~g~~-------~~~~~spdg~~l~~~~~~~~~~~ 108 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK------KWSSFAVKSPT---EIVHEASHPIGGHP-------RANDADTNTRAIFLLAAKQPPYA 108 (365)
T ss_dssp EEECTTSSEEEEEEBT------EEEEEEEEETT---EEEEEEEEECCSSG-------GGGCTTSCCEEEEEEECSSTTCC
T ss_pred EEECCCCCEEEEEccc------eEEEEEECCCC---CEEEeeEeecCCCC-------ccEEECCCCCEEEEEEecCCcce
Confidence 4689999988877443 56666654 33 22111111111112 24566999994 55664
Q ss_pred --------CCCeEEEEEccc-ccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE-
Q 018293 73 --------MEPAIEIWDLDV-IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS- 142 (358)
Q Consensus 73 --------~dg~i~vw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~- 142 (358)
.+|.+.+|+++. ++....... ....+...+.+++|+|+ +++++++.
T Consensus 109 ~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~-----------------------~~~~~~~~~~~~~~spd-G~~l~~~~~ 164 (365)
T 1jof_A 109 VYANPFYKFAGYGNVFSVSETGKLEKNVQN-----------------------YEYQENTGIHGMVFDPT-ETYLYSADL 164 (365)
T ss_dssp EEEEEESSSCCEEEEEEECTTCCEEEEEEE-----------------------EECCTTCCEEEEEECTT-SSEEEEEET
T ss_pred eccceeecCCceEEEEccCCCCcCcceEee-----------------------EEeCCCCcceEEEECCC-CCEEEEEcC
Confidence 689999999963 221111000 00124567899999999 45666655
Q ss_pred cCCeEEEEECC-CCcee--eeec--ccccceeeEEEcCCCCcEEEEEe-CCCcEEEEEccc--CCCcc---ceeee----
Q 018293 143 ADKQVKIWDVA-AGKCN--LTLE--HHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARI--STHSG---FKWAV---- 207 (358)
Q Consensus 143 ~dg~v~iwd~~-~~~~~--~~~~--~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~--~~~~~---~~~~~---- 207 (358)
.++.|.+||+. +++.. ..+. .+...+..++|+|++ +++++++ .++.+.+|++.. ++... .....
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG-NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCC-CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 46899999998 67643 2333 235668999999999 6666665 478999998753 33211 01111
Q ss_pred ---cC------CeeeEE-EcCCCCCeEEEEec-CC-----eEEEEEccc-CCCCCCCCCCCccE---EEeecCCceeEEE
Q 018293 208 ---AA------DVESLA-WDPHAEHSFVVSLE-DG-----TIKGFDIRT-AKSDPDSTSQQSSF---TLHAHDKAVCTIS 267 (358)
Q Consensus 208 ---~~------~i~~~~-~~~~~~~~~~~~~~-dg-----~i~i~d~~~-~~~~~~~~~~~~~~---~~~~~~~~i~~i~ 267 (358)
.. .+..++ |+|++. +++++.. ++ .|.+|++.. + .... ....+......++
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~-~l~v~~~~~~~~~~~~i~v~~~~~~g---------~~~~~~~~~~~~~~~~~~~a 313 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGK-YMFASSRANKFELQGYIAGFKLRDCG---------SIEKQLFLSPTPTSGGHSNA 313 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSS-EEEEEEEESSTTSCCEEEEEEECTTS---------CEEEEEEEEECSSCCTTCCC
T ss_pred CCcccccccccccccEEEECCCCC-EEEEECCCCCCCCCCeEEEEEECCCC---------CEEEeeeeeecCCCCcccce
Confidence 11 478899 999765 5555543 33 899999963 3 2221 1333445567899
Q ss_pred ecC---CCCcEEEEEeC-CCcEEEEecCCC
Q 018293 268 YNP---LVPNLLATGST-DKMVKLWDLSNN 293 (358)
Q Consensus 268 ~~~---~~~~~l~~~~~-dg~i~i~d~~~~ 293 (358)
|+| ++ ++|++++. ++.|.+|++...
T Consensus 314 ~sp~~~dg-~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 314 VSPCPWSD-EWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEECTTCT-TEEEEECSSSCEEEEEEEETT
T ss_pred ecCCCcCC-CEEEEEEcCCCeEEEEEEchh
Confidence 999 77 77887776 589999998765
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=2.3e-17 Score=152.04 Aligned_cols=287 Identities=8% Similarity=-0.035 Sum_probs=181.2
Q ss_pred ccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEE-----ecCCCCeE
Q 018293 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMA-----VGSMEPAI 77 (358)
Q Consensus 3 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-----~g~~dg~i 77 (358)
.+|+|..++....++....-.+|..+...+. ...+...+...... .+.-..++|||||++|| .|+.+..|
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~d~~~~a~~~----~~~~~~~~~SPDG~~la~~~~~~G~~~~~i 149 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQ-EKVLLDPNGWSKDG----TVSLGTWAVSWDGKKVAFAQKPNAADEAVL 149 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSC-CEEEECGGGSSSSS----CEEEEEEEECTTSSEEEEEEEETTCSCCEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCC-cEEEEchHHhccCC----CEEEEEEEECCCCCEEEEEECCCCCceEEE
Confidence 4578888888877653334567777754432 23332221110000 01111445699999999 67777899
Q ss_pred EEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccE--EEEecCCCCCcEEEEEEcCCe---------
Q 018293 78 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV--LGLAWNKEFRNILASASADKQ--------- 146 (358)
Q Consensus 78 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~l~s~~~dg~--------- 146 (358)
++||+.+++.... .+...+ ..++|+|+ ++.|+.++.|..
T Consensus 150 ~v~dl~tg~~~~~-----------------------------~~~~~~~~~~~~wspD-g~~l~~~~~d~~~~~~~~~~~ 199 (695)
T 2bkl_A 150 HVIDVDSGEWSKV-----------------------------DVIEGGKYATPKWTPD-SKGFYYEWLPTDPSIKVDERP 199 (695)
T ss_dssp EEEETTTCCBCSS-----------------------------CCBSCCTTCCCEECTT-SSEEEEEECCCCTTSCGGGGG
T ss_pred EEEECCCCCCcCC-----------------------------cccCcccccceEEecC-CCEEEEEEecCCCCCccccCC
Confidence 9999987654311 011112 67899999 567888887766
Q ss_pred ----EEEEECCCCc----eeeeecccccceeeEEEcCCCCcEEEEEeCCC----cEEEEEcccCCCccceeeecCCeeeE
Q 018293 147 ----VKIWDVAAGK----CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR----SVVMKDARISTHSGFKWAVAADVESL 214 (358)
Q Consensus 147 ----v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~i~~~ 214 (358)
|++|++.+++ ++.....+...+..+.|+|+| ++++.++.++ .|.++|..+++... .......+...
T Consensus 200 ~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~~~~~~~ 277 (695)
T 2bkl_A 200 GYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWKRPGEKDFRL-LVKGVGAKYEV 277 (695)
T ss_dssp GGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEECTTCSSCEE-EEECSSCCEEE
T ss_pred CCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEEcCCCCceEE-eecCCCceEEE
Confidence 9999998876 333334455678899999999 5566555444 56666654443322 34444555666
Q ss_pred EEcCCCCCeEEEEe---cCCeEEEEEcccCCCCCCCCCCCccEEEeec--CCceeEEEecCCCCcEEEEEeCCCcEEEEe
Q 018293 215 AWDPHAEHSFVVSL---EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--DKAVCTISYNPLVPNLLATGSTDKMVKLWD 289 (358)
Q Consensus 215 ~~~~~~~~~~~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d 289 (358)
.+ +++. +++.+. .++.|.+||+.++.. .....+..+ ...+..++++ ++ .++++...|+..++|.
T Consensus 278 ~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~-------~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 278 HA-WKDR-FYVLTDEGAPRQRVFEVDPAKPAR-------ASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRV 346 (695)
T ss_dssp EE-ETTE-EEEEECTTCTTCEEEEEBTTBCSG-------GGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEE
T ss_pred Ee-cCCc-EEEEECCCCCCCEEEEEeCCCCCc-------cCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEE
Confidence 66 5466 655554 358899999876521 112334333 4567888888 44 7888999999888876
Q ss_pred cC-CCCceeeEecCCC-CceeEEEEEcCCCCeEEEEEc---cCCeEEEEEccCCC
Q 018293 290 LS-NNQPSCIASRNPK-AGAVFSVAFSEDSPFVLAIGG---SKGKLEIWDTLSDA 339 (358)
Q Consensus 290 ~~-~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~---~dg~i~vw~~~~~~ 339 (358)
+. .++ ....+..+ .+.+..+.++|++..++++.+ ..+.|++||+.+++
T Consensus 347 ~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 347 ATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 65 233 23344433 567888899999986554443 34689999998876
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=2.3e-17 Score=153.10 Aligned_cols=272 Identities=10% Similarity=0.067 Sum_probs=166.1
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCC-------
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME------- 74 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d------- 74 (358)
.++|++.+++.+ ++ .+++|+...+....++..+... ...+.+ ..+.|||||++|+.++.+
T Consensus 23 ~w~~dg~~~~~~--~~-----~i~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~Spdg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 23 RWISDHEYLYKQ--EN-----NILVFNAEYGNSSVFLENSTFD----EFGHSI--NDYSISPDGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp EECSSSEEEEEE--TT-----EEEEEETTTCCEEEEECTTTTT----TCCSCC--CEEEECTTSSEEEEEEEEEECSSSC
T ss_pred EECCCCcEEEEc--CC-----cEEEEECCCCceEEEEechhhh----hhcccc--cceEECCCCCEEEEEECCeeeEEEc
Confidence 578999888776 55 7889998776433333333211 111110 013459999999998876
Q ss_pred --CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEEC
Q 018293 75 --PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 152 (358)
Q Consensus 75 --g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 152 (358)
+.+.+||+.+++.. .+..|...+...+|||+ ++.||.+ .|+.|.+|++
T Consensus 90 ~~~~~~~~d~~~~~~~----------------------------~l~~~~~~~~~~~~SPd-G~~la~~-~~~~i~~~~~ 139 (740)
T 4a5s_A 90 YTASYDIYDLNKRQLI----------------------------TEERIPNNTQWVTWSPV-GHKLAYV-WNNDIYVKIE 139 (740)
T ss_dssp EEEEEEEEETTTTEEC----------------------------CSSCCCTTEEEEEECSS-TTCEEEE-ETTEEEEESS
T ss_pred cceEEEEEECCCCcEE----------------------------EcccCCCcceeeEECCC-CCEEEEE-ECCeEEEEEC
Confidence 56779999865432 23356778999999999 5567666 5789999999
Q ss_pred CCCceeeee-cccccce-----------------eeEEEcCCCCcEEEEEeCCC--------------------------
Q 018293 153 AAGKCNLTL-EHHTDKV-----------------QAVAWNHHSPQILLSGSFDR-------------------------- 188 (358)
Q Consensus 153 ~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~l~~~~~dg-------------------------- 188 (358)
.+++..+.. .++...+ ..+.|+||| +.|+.++.|.
T Consensus 140 ~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~y 218 (740)
T 4a5s_A 140 PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPY 218 (740)
T ss_dssp TTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEEC
T ss_pred CCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecC
Confidence 887654322 2222222 358999999 6677664321
Q ss_pred ----------cEEEEEccc---CCC--cccee------eecCCeeeEEEcCCCCCeEEEEec----CCeEEEEEcccCCC
Q 018293 189 ----------SVVMKDARI---STH--SGFKW------AVAADVESLAWDPHAEHSFVVSLE----DGTIKGFDIRTAKS 243 (358)
Q Consensus 189 ----------~i~i~d~~~---~~~--~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~----dg~i~i~d~~~~~~ 243 (358)
.|.+||+.+ ++. ..... .+...+..++|+|++. .++.... +..|.+||+.+++.
T Consensus 219 p~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~ 297 (740)
T 4a5s_A 219 PKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSG 297 (740)
T ss_dssp CBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTT
T ss_pred CCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCcc
Confidence 478888887 632 11111 1445688999999765 4444332 23799999988730
Q ss_pred CCCCCCCCccEEE--eecCCcee-----EEEecCCCCcEEE-EEe-CCC--cEEEEecCCCCceeeEecCCCCceeEEEE
Q 018293 244 DPDSTSQQSSFTL--HAHDKAVC-----TISYNPLVPNLLA-TGS-TDK--MVKLWDLSNNQPSCIASRNPKAGAVFSVA 312 (358)
Q Consensus 244 ~~~~~~~~~~~~~--~~~~~~i~-----~i~~~~~~~~~l~-~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~~~v~~~~ 312 (358)
... ......+ ..|...+. .+.|+||| +.|+ ..+ .+| .|++||+.+++.. .+......+..+.
T Consensus 298 ~~~---~~~~~~l~~~~~~~~v~~~~~~~p~fspDG-~~l~~~~s~~~G~~~l~~~~~~~~~~~---~lT~g~~~v~~~~ 370 (740)
T 4a5s_A 298 RWN---CLVARQHIEMSTTGWVGRFRPSEPHFTLDG-NSFYKIISNEEGYRHICYFQIDKKDCT---FITKGTWEVIGIE 370 (740)
T ss_dssp EEE---ECGGGCEEEECSSSCSSSSSCCCCEECTTS-SEEEEEEECTTSCEEEEEEETTCSSCE---ESCCSSSCEEEEE
T ss_pred ccc---eeEEEEeeeccCCceEccCcCCCceEcCCC-CEEEEEEEcCCCceEEEEEECCCCceE---ecccCCEEEEEEE
Confidence 000 0011111 34554444 78899999 5444 554 344 4888898877632 3333344555544
Q ss_pred EcCCCCeEEEEEcc
Q 018293 313 FSEDSPFVLAIGGS 326 (358)
Q Consensus 313 ~~~~~~~~l~~~~~ 326 (358)
. ++++.+++++..
T Consensus 371 ~-~d~~~i~f~~~~ 383 (740)
T 4a5s_A 371 A-LTSDYLYYISNE 383 (740)
T ss_dssp E-ECSSEEEEEESC
T ss_pred E-EeCCEEEEEEec
Confidence 2 446667776665
No 173
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.79 E-value=7.5e-17 Score=131.12 Aligned_cols=240 Identities=10% Similarity=0.058 Sum_probs=162.8
Q ss_pred CccccCCCceEE-ecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCc
Q 018293 58 PLKDREKGNFMA-VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN 136 (358)
Q Consensus 58 ~~~~s~~~~~l~-~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 136 (358)
.++++++|++++ +...++.|.+|+..+..... ....+...+.+++++++ +.
T Consensus 28 ~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~---------------------------~~~~~~~~p~~i~~~~~-g~ 79 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV---------------------------LPFNGLYQPQGLAVDGA-GT 79 (270)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECC-----EE---------------------------CCCCSCCSCCCEEECTT-CC
T ss_pred ceEECCCCCEEEEccCCCCcEEEecCCCcccce---------------------------EeeCCcCCcceeEECCC-CC
Confidence 445589999777 65778999999875322110 00123346788999998 55
Q ss_pred EEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEE
Q 018293 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAW 216 (358)
Q Consensus 137 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 216 (358)
++++.. ++.|.+||................+..+++.+++ .++++...++.|.+|+..+.............+..+++
T Consensus 80 l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~ 157 (270)
T 1rwi_B 80 VYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAV 157 (270)
T ss_dssp EEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEE
T ss_pred EEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEE
Confidence 555555 8899999987654332222233568899999988 77777777889999976544332211222346788999
Q ss_pred cCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce
Q 018293 217 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 296 (358)
++++ +++++...++.|.+||.... ........+...+.+++++++| .++++...++.|.+||......
T Consensus 158 ~~~g-~l~v~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~- 225 (270)
T 1rwi_B 158 DNSG-NVYVTDTDNNRVVKLEAESN---------NQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS- 225 (270)
T ss_dssp CTTC-CEEEEEGGGTEEEEECTTTC---------CEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC-
T ss_pred eCCC-CEEEEECCCCEEEEEecCCC---------ceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc-
Confidence 9955 47777667889999998764 2111112223567899999988 7777777788999999876542
Q ss_pred eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcc
Q 018293 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 297 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 341 (358)
......+...+.+++++++|+ ++++...++.|+++++...+..
T Consensus 226 -~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 226 -TVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp -EECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGGSC
T ss_pred -eeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCcccc
Confidence 222222335688999999998 7888889999999998776543
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=2.4e-16 Score=133.43 Aligned_cols=270 Identities=14% Similarity=0.134 Sum_probs=169.8
Q ss_pred CcccCCCcEEEEEEecC-----CCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCC--
Q 018293 1 MTINPNDAVIVCARNED-----DVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM-- 73 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-- 73 (358)
+.|+|+++.+.++.... ....-.+.+|+.... ... .............-.|..++++|||++|+++..
T Consensus 55 i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~---~~~--~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~ 129 (361)
T 2oiz_A 55 VQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL---TFE--KEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP 129 (361)
T ss_dssp EEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC---CEE--EEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS
T ss_pred eEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC---cEE--EEEEcCccccccCCCcceEEECCCCCEEEEECCCC
Confidence 47899999999986410 001226788887653 111 111111000000011334566999999998864
Q ss_pred CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECC
Q 018293 74 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 153 (358)
Q Consensus 74 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 153 (358)
++.|.+||+.+.+..... + .+. ....+.+.|++...+++.+.||.+.+|+..
T Consensus 130 ~~~v~v~d~~~~~~~~~~--------------------------i-~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 130 ATSIGIVDVAKGDYVEDV--------------------------T-AAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp SEEEEEEETTTTEEEEEE--------------------------G-GGT-TEEEEEECTTSSSEEEEEETTSSEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEE--------------------------e-cCC-CcceeEEcCCCCeeEEEECCCCcEEEEEEC
Confidence 689999999864332210 0 011 122255677766788899999999999986
Q ss_pred C-Cceee------eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce-ee-----------ecCCeeeE
Q 018293 154 A-GKCNL------TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-WA-----------VAADVESL 214 (358)
Q Consensus 154 ~-~~~~~------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~-----------~~~~i~~~ 214 (358)
. ++... .+.....++ .+.+++++ ..++..+.++.+.++|+......... .. .......+
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPI-FIAPALDK-DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCB-CSCCEECS-SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CCCcEeeeccccceEcCCCCce-EEEecccC-CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 5 55441 222222222 33445666 55666778899999998755422110 00 01222347
Q ss_pred EEcCCCCCeEEEEe----------cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCc
Q 018293 215 AWDPHAEHSFVVSL----------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 284 (358)
Q Consensus 215 ~~~~~~~~~~~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 284 (358)
+++|+++..+++.. ..+.|.+||+.+. +.+..+..+. ..+++|+|++ ++|++++. +.
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~---------~~v~~i~~~~--p~~ia~spdg-~~l~v~n~-~~ 326 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK---------QRVARIPGRD--ALSMTIDQQR-NLMLTLDG-GN 326 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT---------EEEEEEECTT--CCEEEEETTT-TEEEEECS-SC
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC---------cEEEEEecCC--eeEEEECCCC-CEEEEeCC-Ce
Confidence 89997664444433 1358999999887 7777787776 8999999999 68888776 99
Q ss_pred EEEEecCCCCceeeEecCCCCceeEEEEEcCCCC
Q 018293 285 VKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP 318 (358)
Q Consensus 285 i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 318 (358)
|.+||..++++..+..+.........++++|+|+
T Consensus 327 v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 327 VNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9999999994335666555566778899999986
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=9.8e-17 Score=147.32 Aligned_cols=199 Identities=8% Similarity=0.007 Sum_probs=133.6
Q ss_pred CcccEEEEecCCCCCcEEEEEEcC----------CeEEEEECCC------Cceeeeec-ccccceeeEEEcCCCCcEEEE
Q 018293 121 HTDSVLGLAWNKEFRNILASASAD----------KQVKIWDVAA------GKCNLTLE-HHTDKVQAVAWNHHSPQILLS 183 (358)
Q Consensus 121 h~~~v~~~~~~~~~~~~l~s~~~d----------g~v~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~ 183 (358)
|...+..++|+|+ ++.|++++.+ ..|.+||+.+ ++. ..+. .+...+..++|+||| +.|+.
T Consensus 128 ~~~~~~~~~~spD-g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG-~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPE-RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDG-RQAVW 204 (662)
T ss_dssp TCEEEEEEEEETT-TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTS-SEEEE
T ss_pred CCccccCcEECCC-CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCC-CEEEE
Confidence 6678899999999 5678777776 5899999988 554 3444 556778899999999 77776
Q ss_pred EeCC--------CcEEEEEcc-cC---CCccceeeecCCeeeEEEcCCCCCeEEEEecCC--eEEEEEcccCCCCCCCCC
Q 018293 184 GSFD--------RSVVMKDAR-IS---THSGFKWAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTS 249 (358)
Q Consensus 184 ~~~d--------g~i~i~d~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg--~i~i~d~~~~~~~~~~~~ 249 (358)
++.+ ..|.+||+. ++ +.......+...+..+.|+|++. +++++..++ .|.+||+.++
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~-------- 275 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATG-------- 275 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTC--------
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCC--------
Confidence 6644 479999998 45 22222223357889999999776 888888888 5666665443
Q ss_pred CCccEEEeecCCc---------eeEEEecCCCCcEEEEEeCCCcEEEE--ecCCCCceeeEecCCCCceeEEEEEcCCCC
Q 018293 250 QQSSFTLHAHDKA---------VCTISYNPLVPNLLATGSTDKMVKLW--DLSNNQPSCIASRNPKAGAVFSVAFSEDSP 318 (358)
Q Consensus 250 ~~~~~~~~~~~~~---------i~~i~~~~~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 318 (358)
. ...+..+... +..++|+|++ .++++++. +.+++| |+.+++ ...+..+...+..+. ++++.
T Consensus 276 -~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~-~~~~~~~~-~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~-s~~~~ 347 (662)
T 3azo_A 276 -A-ATQLCRREEEFAGPLWTPGMRWFAPLANG-LIAVVHGK-GAAVLGILDPESGE---LVDAAGPWTEWAATL-TVSGT 347 (662)
T ss_dssp -C-EEESSCCSSBSSCCCCSTTCCSEEECTTS-CEEEEEBS-SSCEEEEEETTTTE---EEECCSSCCEEEEEE-EEETT
T ss_pred -c-eeecccccccccCccccccCceEeEeCCC-EEEEEEEc-CccEEEEEECCCCc---EEEecCCCCeEEEEE-ecCCC
Confidence 1 1122212111 4578888887 78889888 999999 554454 455666777777661 34444
Q ss_pred eE-EEEEccCC--eEEEEEccCCC
Q 018293 319 FV-LAIGGSKG--KLEIWDTLSDA 339 (358)
Q Consensus 319 ~~-l~~~~~dg--~i~vw~~~~~~ 339 (358)
.+ +++++.+. .|.+||+.+++
T Consensus 348 ~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 348 RAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEEEcCCCCCCEEEEEECCCCc
Confidence 33 44444454 45556665655
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=1.2e-17 Score=143.60 Aligned_cols=235 Identities=9% Similarity=0.019 Sum_probs=149.6
Q ss_pred CccccCCCceEEecCCC---CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCC
Q 018293 58 PLKDREKGNFMAVGSME---PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF 134 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~d---g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 134 (358)
.++|||||++|+..... ..|.+||+.+++... ...++......+.|+|+
T Consensus 40 ~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~---------------------------l~~~~~~~~~~~~~spd- 91 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ---------------------------LTEGKGDNTFGGFISTD- 91 (396)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE---------------------------CCCSSCBCTTTCEECTT-
T ss_pred cCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE---------------------------eecCCCCccccceECCC-
Confidence 45679999998776432 468888876533211 01112222334789999
Q ss_pred CcEEEEEEcCCeEEEEECCCCceeeeecccccceee-------------------EEEcCCCCcEEEEE-----eCCCcE
Q 018293 135 RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQA-------------------VAWNHHSPQILLSG-----SFDRSV 190 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~l~~~-----~~dg~i 190 (358)
++.|+.++.++.|.+||+.+++.......+...... +.|+|++ +.++.. ..+..|
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-SWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-SHHHHHHHHHTCCCEEE
T ss_pred CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCC-cceeeeeeccCCCcceE
Confidence 668888888899999999988765554433332222 3467777 444333 456789
Q ss_pred EEEEcccCCCccceeeecCCeeeEEEcC-CCCCeEEEEecC------CeEEEEEcccCCCCCCCCCCCccEEEeec--CC
Q 018293 191 VMKDARISTHSGFKWAVAADVESLAWDP-HAEHSFVVSLED------GTIKGFDIRTAKSDPDSTSQQSSFTLHAH--DK 261 (358)
Q Consensus 191 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~~ 261 (358)
.+||+.+++... .......+..+.|+| ++. .++..+.+ ..|.+||+.... ...+..+ ..
T Consensus 171 ~~~d~~~g~~~~-~~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~----------~~~l~~~~~~~ 238 (396)
T 3c5m_A 171 IKVDIETGELEV-IHQDTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGSN----------VRKIKEHAEGE 238 (396)
T ss_dssp EEEETTTCCEEE-EEEESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSCC----------CEESSCCCTTE
T ss_pred EEEECCCCcEEe-eccCCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCCc----------eeEeeccCCCc
Confidence 999998766543 335667789999999 554 44444333 368888876541 2222222 23
Q ss_pred ceeEEEecCCCCcEEEEEeCC-----CcEEEEecCCCCceeeEecCCCCceeEEEEEcC-CCCeEEEEEc----------
Q 018293 262 AVCTISYNPLVPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE-DSPFVLAIGG---------- 325 (358)
Q Consensus 262 ~i~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~---------- 325 (358)
.+..++|+|++ +.|+..+.+ +.|++||+.+++...+..... .. +.|+| +|+. ++.++
T Consensus 239 ~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~-l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 239 SCTHEFWIPDG-SAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSL-MVGDGCDAPVDVADA 311 (396)
T ss_dssp EEEEEEECTTS-SCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSE-EEEEECCC-------
T ss_pred cccceEECCCC-CEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCce-EEEecCCcceeeccc
Confidence 57889999999 555444333 349999998887544433332 22 88999 9995 55443
Q ss_pred ------cCCeEEEEEccCCCc
Q 018293 326 ------SKGKLEIWDTLSDAG 340 (358)
Q Consensus 326 ------~dg~i~vw~~~~~~~ 340 (358)
.++.|++||+.+++.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBC
T ss_pred cccccCCCCcEEEEecccCce
Confidence 347899999987764
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.76 E-value=1.8e-15 Score=126.84 Aligned_cols=226 Identities=8% Similarity=0.022 Sum_probs=148.6
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+|+++|++++++..++.|.+||..+++... ....+...+.+++++|+ +++++
T Consensus 51 ~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~---------------------------~~~~~~~~~~~i~~~~d-g~l~v 102 (333)
T 2dg1_A 51 NFDRQGQLFLLDVFEGNIFKINPETKEIKR---------------------------PFVSHKANPAAIKIHKD-GRLFV 102 (333)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEE---------------------------EEECSSSSEEEEEECTT-SCEEE
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCcEEE---------------------------EeeCCCCCcceEEECCC-CcEEE
Confidence 448899988888889999999986533211 01124567999999999 56777
Q ss_pred EEEcC----CeEEEEECCCCceeeeec--ccccceeeEEEcCCCCcEEEEEeC------CCcEEEEEcccCCCccceeee
Q 018293 140 SASAD----KQVKIWDVAAGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSF------DRSVVMKDARISTHSGFKWAV 207 (358)
Q Consensus 140 s~~~d----g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~ 207 (358)
+...+ +.|.+||.++++....+. .....+.+++++|++ .++++... .+.|..+|..+++... ....
T Consensus 103 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 180 (333)
T 2dg1_A 103 CYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQN 180 (333)
T ss_dssp EECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEE
T ss_pred EeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEE-eecC
Confidence 66665 689999988776543332 234578999999998 66666543 3556666655433322 2233
Q ss_pred cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEE--------EeecCCceeEEEecCCCCcEEEEE
Q 018293 208 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT--------LHAHDKAVCTISYNPLVPNLLATG 279 (358)
Q Consensus 208 ~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~i~~~~~~~~~l~~~ 279 (358)
...+..++|+|++..++++...++.|.+||+.... ..... +..+ ..+..+++++++ +++++.
T Consensus 181 ~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g--------~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~ 250 (333)
T 2dg1_A 181 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDG--------VTIQPFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAM 250 (333)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS--------SSEEEEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEE
T ss_pred CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC--------cCcccccceEEEecCCC-CCCCceEECCCC-CEEEEE
Confidence 45678899999765455666678899999996421 11111 1111 367889999998 777777
Q ss_pred eCCCcEEEEecCCCCceeeEecCC----CCceeEEEEEcCCCCeEEEEEcc
Q 018293 280 STDKMVKLWDLSNNQPSCIASRNP----KAGAVFSVAFSEDSPFVLAIGGS 326 (358)
Q Consensus 280 ~~dg~i~i~d~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~ 326 (358)
..++.|.+||.. ++......... |...+.+++|+|++..++++...
T Consensus 251 ~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 251 YGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred cCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 778899999984 44222222221 11268899999998765554443
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.76 E-value=6.1e-16 Score=130.54 Aligned_cols=256 Identities=11% Similarity=0.093 Sum_probs=156.1
Q ss_pred CCcEEEEEEecC----CCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCC---Ce--
Q 018293 6 NDAVIVCARNED----DVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME---PA-- 76 (358)
Q Consensus 6 ~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g~-- 76 (358)
+|+.++...... +...-.+|+++...+....+ ..... +.|||||++||..+.+ +.
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---------~~~~~-------~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---------ENATM-------PRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---------ESCEE-------EEECTTSSEEEEEEEETTTTEEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---------ccCCC-------eEECCCCCEEEEEEeccCCCcce
Confidence 677776653321 11245788888876421111 11223 3459999999887654 33
Q ss_pred EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc-------------
Q 018293 77 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA------------- 143 (358)
Q Consensus 77 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------------- 143 (358)
|.+|++.+++... +..+.. +..++|+|++ +.|+.++.
T Consensus 87 l~~~~~~~g~~~~----------------------------l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 87 IWVADLETLSSKK----------------------------ILEAKN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp EEEEETTTTEEEE----------------------------EEEESE-EEEEEECTTS-SEEEEEEECCCC---------
T ss_pred EEEEECCCCceEE----------------------------EEcCCC-ccceeECCCC-CEEEEEEccCCCcCCcEEEcc
Confidence 6667765432211 111223 8999999994 56666653
Q ss_pred --------------CCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCC-------cEEEEEcccCCCcc
Q 018293 144 --------------DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR-------SVVMKDARISTHSG 202 (358)
Q Consensus 144 --------------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~ 202 (358)
...|.+||+.+++.+..+.. . .+..+.|+|++ +++++..++ ...+|.+.+++. .
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~ 211 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKE-E 211 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEE-E
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCce-E
Confidence 25799999998876455554 4 78899999998 666665542 345555443322 2
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEecC-------CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeE-EEecCCCCc
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLED-------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT-ISYNPLVPN 274 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~-i~~~~~~~~ 274 (358)
..... ..+.. ++|++..+++.+..+ ..|.+|| ++ ........+...+.. +.|+ ++
T Consensus 212 ~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~---------~~~~l~~~~~~~~~~~~~~s-dg-- 274 (347)
T 2gop_A 212 KMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GK---------EVMGILDEVDRGVGQAKIKD-GK-- 274 (347)
T ss_dssp EEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SS---------CEEESSTTCCSEEEEEEEET-TE--
T ss_pred EeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CC---------ceEeccccCCcccCCccEEc-Cc--
Confidence 22233 33443 388766444444332 4688887 33 222222345667776 8998 65
Q ss_pred EEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeE-EEEEcc
Q 018293 275 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKL-EIWDTL 336 (358)
Q Consensus 275 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i-~vw~~~ 336 (358)
++++++.++.+++| +.+++. ..+..+...|.+++|+| . ++++++.++.. .+|.+.
T Consensus 275 ~~~~~~~~~~~~l~-~~~g~~---~~~~~~~~~v~~~~~s~--~-~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 275 VYFTLFEEGSVNLY-IWDGEI---KPIAKGRHWIMGFDVDE--I-VVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEEEETTEEEEE-EESSSE---EEEECSSSEEEEEEESS--S-EEEEEECSSSCCEEEEES
T ss_pred EEEEEecCCcEEEE-EcCCce---EEEecCCCeEEeeeeeC--c-EEEEEcCCCChHHheEeC
Confidence 88888999999999 875542 22333467899999999 4 56666666654 777776
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=8.7e-16 Score=128.52 Aligned_cols=251 Identities=10% Similarity=0.079 Sum_probs=164.8
Q ss_pred CcccCCCcEEEEEEecCCC-------------------ceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccc
Q 018293 1 MTINPNDAVIVCARNEDDV-------------------SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKD 61 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (358)
|+++|+|+++++...+.-. ..-.+++|+...+ .+........-..|. .+++
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~p~-------gia~ 98 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---EILQSSGKNLFYLPH-------GLSI 98 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---CEEEEECTTTCSSEE-------EEEE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---eEEeccCCCccCCce-------EEEE
Confidence 4689999998877544200 0015788887654 222111000111222 3455
Q ss_pred cCCCceEEecCCCCeEEEEEccccc-CcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVID-EVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 140 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 140 (358)
+++|+++++...++.|++|+.+... .+.. ++.. .....-.++-.....++++|+++.++++
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~---~~~~---------------~~~g~~~~~~~~P~~ia~~~~~g~lyv~ 160 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHSKEGPLLI---LGRS---------------MQPGSDQNHFCQPTDVAVEPSTGAVFVS 160 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCSSCCSEE---ESBT---------------TBCCCSTTCCSSEEEEEECTTTCCEEEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCeEEEEE---eccc---------------CCCCCCccccCCCcEEEEeCCCCeEEEE
Confidence 8999999999999999999986431 1111 0000 0000012355678999999943777777
Q ss_pred EE-cCCeEEEEECCCCceeeeeccc----------ccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee--ee
Q 018293 141 AS-ADKQVKIWDVAAGKCNLTLEHH----------TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW--AV 207 (358)
Q Consensus 141 ~~-~dg~v~iwd~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~ 207 (358)
.+ .++.|++|| .+++.+..+... -.....++++|++..++++...++.|++||..+++...... ..
T Consensus 161 d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~ 239 (329)
T 3fvz_A 161 DGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF 239 (329)
T ss_dssp ECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT
T ss_pred eCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc
Confidence 76 689999999 567776666422 23478999999844888888889999999998665544221 23
Q ss_pred cCCeeeEEEcCCCCCeEEEE-------ecCCeEEEEEcccCCCCCCCCCCCccEEE---eecCCceeEEEecCCCCcEEE
Q 018293 208 AADVESLAWDPHAEHSFVVS-------LEDGTIKGFDIRTAKSDPDSTSQQSSFTL---HAHDKAVCTISYNPLVPNLLA 277 (358)
Q Consensus 208 ~~~i~~~~~~~~~~~~~~~~-------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~~l~ 277 (358)
...+..++++| +..+.+. ..+..|++||..++ ..+..+ ..+.....+++++|+| .+++
T Consensus 240 ~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g---------~~~~~~~~~~~~~~~p~~ia~~~dG-~lyv 307 (329)
T 3fvz_A 240 GRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSG---------EIIDVFKPVRKHFDMPHDIVASEDG-TVYI 307 (329)
T ss_dssp TTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTC---------CEEEEECCSSSCCSSEEEEEECTTS-EEEE
T ss_pred CCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCC---------eEEEEEcCCCCccCCeeEEEECCCC-CEEE
Confidence 45678888988 2222222 23458999999876 555555 3556678999999998 8889
Q ss_pred EEeCCCcEEEEecCC
Q 018293 278 TGSTDKMVKLWDLSN 292 (358)
Q Consensus 278 ~~~~dg~i~i~d~~~ 292 (358)
+...++.|++|++..
T Consensus 308 ad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 308 GDAHTNTVWKFTLTE 322 (329)
T ss_dssp EESSSCCEEEEEEEE
T ss_pred EECCCCEEEEEeCCc
Confidence 988999999999864
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=1.4e-15 Score=125.45 Aligned_cols=230 Identities=10% Similarity=0.052 Sum_probs=153.4
Q ss_pred ccccCCCc-eEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcE
Q 018293 59 LKDREKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 137 (358)
Q Consensus 59 ~~~s~~~~-~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 137 (358)
+.|+|+|+ +++++..++.|..|+..+. .. .+..+...+.+++++++ +.+
T Consensus 33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~---------------------------~~~~~~~~~~~l~~~~d-g~l 82 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQNRTWAWSDDGQ--LS---------------------------PEMHPSHHQNGHCLNKQ-GHL 82 (296)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTSC--EE---------------------------EEESSCSSEEEEEECTT-CCE
T ss_pred CeEeCCCCEEEEEeCCCCEEEEEECCCC--eE---------------------------EEECCCCCcceeeECCC-CcE
Confidence 44589998 7888888999999998753 11 12235567899999999 557
Q ss_pred EEEEEcCCeEEEEECCCCceeeeeccc----ccceeeEEEcCCCCcEEEEEeC-----------------CCcEEEEEcc
Q 018293 138 LASASADKQVKIWDVAAGKCNLTLEHH----TDKVQAVAWNHHSPQILLSGSF-----------------DRSVVMKDAR 196 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~ 196 (358)
+++...++.|.+||..+++........ ...+..++++|+| +++++.+. .+.|..++..
T Consensus 83 ~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 83 IACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp EEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred EEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 776666789999999888754433221 2346789999999 77776321 2355555544
Q ss_pred cCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCc---cEEEeecCCceeEEEecCCCC
Q 018293 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS---SFTLHAHDKAVCTISYNPLVP 273 (358)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~~~~~~~i~~i~~~~~~~ 273 (358)
+ ..............++|+|++. .+++.+.++.|.+||+.... .. ...+..+...+.+++++++|
T Consensus 162 -g-~~~~~~~~~~~~~gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g--------~~~~~~~~~~~~~~~p~~i~~d~~G- 229 (296)
T 3e5z_A 162 -G-TLSAPIRDRVKPNGLAFLPSGN-LLVSDTGDNATHRYCLNARG--------ETEYQGVHFTVEPGKTDGLRVDAGG- 229 (296)
T ss_dssp -S-CEEEEECCCSSEEEEEECTTSC-EEEEETTTTEEEEEEECSSS--------CEEEEEEEECCSSSCCCSEEEBTTS-
T ss_pred -C-CEEEeecCCCCCccEEECCCCC-EEEEeCCCCeEEEEEECCCC--------cCcCCCeEeeCCCCCCCeEEECCCC-
Confidence 2 2222334445678999999765 55777788999999997320 21 11223345567789999998
Q ss_pred cEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEE-cCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 274 NLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF-SEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
+++++. ++.|.+||.. ++ .+..+..+.. +.+++| .|+++. |++++.+ .+.-++..+.+
T Consensus 230 ~l~v~~--~~~v~~~~~~-g~--~~~~~~~~~~-~~~~~f~~~d~~~-L~v~t~~-~l~~~~~~~~~ 288 (296)
T 3e5z_A 230 LIWASA--GDGVHVLTPD-GD--ELGRVLTPQT-TSNLCFGGPEGRT-LYMTVST-EFWSIETNVRG 288 (296)
T ss_dssp CEEEEE--TTEEEEECTT-SC--EEEEEECSSC-CCEEEEESTTSCE-EEEEETT-EEEEEECSCCB
T ss_pred CEEEEc--CCeEEEECCC-CC--EEEEEECCCC-ceeEEEECCCCCE-EEEEcCC-eEEEEEccccc
Confidence 655555 7889999986 44 3344444555 889999 588886 5545554 45556665544
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=2e-15 Score=126.68 Aligned_cols=239 Identities=9% Similarity=0.034 Sum_probs=161.2
Q ss_pred CccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcE
Q 018293 58 PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 137 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 137 (358)
++.|++++..++..+.++.++.|.-.. ...+..+...+.+++|+++ +.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~-g~l 58 (333)
T 2dg1_A 10 TLFYSGKSNSAVPIISESELQTITAEP------------------------------WLEISKKGLQLEGLNFDRQ-GQL 58 (333)
T ss_dssp BCCSCGGGGCSSCCCCGGGSCEEECEE------------------------------EEEEESSCCCEEEEEECTT-SCE
T ss_pred eeeecCCccceeEEeecccCcccccce------------------------------eEEEeccCccccCcEECCC-CCE
Confidence 445688888888878888899883221 1122245567799999998 567
Q ss_pred EEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCC----CcEEEEEcccCCCcccee--eecCCe
Q 018293 138 LASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD----RSVVMKDARISTHSGFKW--AVAADV 211 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~~~i 211 (358)
++++..++.|.+||.++++.......+...+.++++++++ +++++...+ +.|.+||..+........ .....+
T Consensus 59 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 137 (333)
T 2dg1_A 59 FLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCI 137 (333)
T ss_dssp EEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCE
T ss_pred EEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcc
Confidence 7788889999999998887655443456789999999998 777776666 689999988765432111 233568
Q ss_pred eeEEEcCCCCCeEEEEec------CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcE
Q 018293 212 ESLAWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 285 (358)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i 285 (358)
..++++|++ +++++... .+.|..+|.... . ...+..+...+..++|+|++..++++.+.++.|
T Consensus 138 ~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~---------~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i 206 (333)
T 2dg1_A 138 DDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFR---------T-VTPIIQNISVANGIALSTDEKVLWVTETTANRL 206 (333)
T ss_dssp EEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSC---------C-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred cceEECCCC-CEEEEeccccccCCCceEEEEeCCCC---------E-EEEeecCCCcccceEECCCCCEEEEEeCCCCeE
Confidence 899999965 45555443 245666665432 1 222323334578999999983344555667899
Q ss_pred EEEecCC-CCcee------eEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 286 KLWDLSN-NQPSC------IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 286 ~i~d~~~-~~~~~------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
.+||+.+ +.... ......+ ..+..++++++|. ++++...++.|.+||. +++.+.
T Consensus 207 ~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~-~g~~~~ 267 (333)
T 2dg1_A 207 HRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNK-RGYPIG 267 (333)
T ss_dssp EEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECT-TSCEEE
T ss_pred EEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECC-CCCEEE
Confidence 9999964 32211 1112222 4678899999998 5776667789999998 455443
No 182
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.73 E-value=3e-16 Score=144.11 Aligned_cols=245 Identities=10% Similarity=-0.022 Sum_probs=147.0
Q ss_pred cCCCcE-EEEEEecCCCceEEEEEEecc--C-CCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCC-----
Q 018293 4 NPNDAV-IVCARNEDDVSHLEVYILEES--D-GGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME----- 74 (358)
Q Consensus 4 ~p~~~~-l~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d----- 74 (358)
||+|+. |+.+... ..+||+++.. . +....+............. +++|||||++|++++.+
T Consensus 87 SPDg~~~la~~~~~----~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~-------~~~~spDg~~l~~~~~~~~~~~ 155 (662)
T 3azo_A 87 RPAGGPLLVFTHFG----DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWA-------DPVLLPERGEVWCMAEEFTGEG 155 (662)
T ss_dssp CSSSSCEEEEEBTT----TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEE-------EEEEETTTTEEEEEEEEECSSS
T ss_pred ecCCCeEEEEEECC----CCeEEEEcCCCCCCCCCEeccCCccCCCCcccc-------CcEECCCCCEEEEEEecccCCC
Confidence 599998 7766332 2368888865 2 2111111100000011112 34559999999998876
Q ss_pred -----CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccC-CCcccEEEEecCCCCCcEEEEEEcC----
Q 018293 75 -----PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKG-SHTDSVLGLAWNKEFRNILASASAD---- 144 (358)
Q Consensus 75 -----g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d---- 144 (358)
..|++||+.+..... ......+. .+...+..++|+|+ +++|+.++.+
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~----------------------~~~~~~l~~~~~~~~~~~~~SpD-G~~la~~~~~~~~~ 212 (662)
T 3azo_A 156 PSDVRRFLAAVPLDGSAAAD----------------------RSAVRELSDDAHRFVTGPRLSPD-GRQAVWLAWDHPRM 212 (662)
T ss_dssp TTCEEEEEEEEETTSTTTTC----------------------GGGSEESSCSCSSEECCCEECTT-SSEEEEEEECTTCC
T ss_pred CCCceeEEEEEECCCCcccc----------------------CCceeEEEecCCCcccCceECCC-CCEEEEEECCCCCC
Confidence 589999987510000 00011222 34567888999999 5677777655
Q ss_pred ----CeEEEEECC-CC---ceeeeecccccceeeEEEcCCCCcEEEEEeCCC--cEEEEEcccCCCccceeeecC-----
Q 018293 145 ----KQVKIWDVA-AG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR--SVVMKDARISTHSGFKWAVAA----- 209 (358)
Q Consensus 145 ----g~v~iwd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~----- 209 (358)
..|.+||+. ++ +.......+...+..+.|+|+| +++++++.++ .|.+||+.+++.......+..
T Consensus 213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg-~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~ 291 (662)
T 3azo_A 213 PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG-SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPL 291 (662)
T ss_dssp TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS-CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCC
T ss_pred CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC-eEEEEECCCCCeEEEEEECCCCceeecccccccccCcc
Confidence 379999998 56 4444444557889999999999 5888888888 566666545443221111111
Q ss_pred ---CeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEE-EecCCCCcEEEE-EeCCC-
Q 018293 210 ---DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI-SYNPLVPNLLAT-GSTDK- 283 (358)
Q Consensus 210 ---~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i-~~~~~~~~~l~~-~~~dg- 283 (358)
.+..++|+|+ +.+++++.. +.+++|.+... ......+..+...+..+ .++ +..++++ ++.+.
T Consensus 292 w~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~d~~--------~~~~~~l~~~~~~~~~~~s~~--~~~~~~~~~~~~~~ 359 (662)
T 3azo_A 292 WTPGMRWFAPLAN-GLIAVVHGK-GAAVLGILDPE--------SGELVDAAGPWTEWAATLTVS--GTRAVGVAASPRTA 359 (662)
T ss_dssp CSTTCCSEEECTT-SCEEEEEBS-SSCEEEEEETT--------TTEEEECCSSCCEEEEEEEEE--TTEEEEEEEETTEE
T ss_pred ccccCceEeEeCC-CEEEEEEEc-CccEEEEEECC--------CCcEEEecCCCCeEEEEEecC--CCEEEEEEcCCCCC
Confidence 1567888884 558888888 99999955432 12345666676777766 444 4344444 44444
Q ss_pred -cEEEEecCCCCc
Q 018293 284 -MVKLWDLSNNQP 295 (358)
Q Consensus 284 -~i~i~d~~~~~~ 295 (358)
.|.++|+.+++.
T Consensus 360 ~~i~~~d~~~g~~ 372 (662)
T 3azo_A 360 YEVVELDTVTGRA 372 (662)
T ss_dssp EEEEEEETTTCCE
T ss_pred CEEEEEECCCCce
Confidence 455667767663
No 183
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.73 E-value=3.4e-15 Score=122.44 Aligned_cols=237 Identities=12% Similarity=0.113 Sum_probs=153.5
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeecee--ecCCcccceeeecCCccc-cCCCceEEecCC-CCe
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHI--IIPAFPLCMAWLDCPLKD-REKGNFMAVGSM-EPA 76 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-s~~~~~l~~g~~-dg~ 76 (358)
|+++|+++++++...++ .|++|+.... ....+..... .....+. .+++ .++++++++... ++.
T Consensus 35 v~~~~~g~l~v~~~~~~-----~i~~~d~~g~-~~~~~~~~~~~~~~~~~p~-------~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNH-----RIQIFDKEGR-FKFQFGECGKRDSQLLYPN-------RVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp EEECTTCCEEEEEGGGT-----EEEEECTTSC-EEEEECCBSSSTTCBSSEE-------EEEEETTTTEEEEEECGGGCE
T ss_pred EEECCCCCEEEEECCCC-----EEEEECCCCc-EEEEecccCCCcccccCce-------EEEEEcCCCeEEEEcCCCCCE
Confidence 35788998877765555 7888886532 1111110000 0001122 3344 467777777643 789
Q ss_pred EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCc
Q 018293 77 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK 156 (358)
Q Consensus 77 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 156 (358)
|++||.+ ++.... ....+...+.+++++|+ ++++++...++.|.+||.. ++
T Consensus 102 i~~~d~~-g~~~~~--------------------------~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~-g~ 152 (286)
T 1q7f_A 102 IQIYNQY-GQFVRK--------------------------FGATILQHPRGVTVDNK-GRIIVVECKVMRVIIFDQN-GN 152 (286)
T ss_dssp EEEECTT-SCEEEE--------------------------ECTTTCSCEEEEEECTT-SCEEEEETTTTEEEEECTT-SC
T ss_pred EEEECCC-CcEEEE--------------------------ecCccCCCceEEEEeCC-CCEEEEECCCCEEEEEcCC-CC
Confidence 9999943 222110 00124456899999999 5677777778999999954 55
Q ss_pred eeeeec--ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeee--cCCeeeEEEcCCCCCeEEEEecCC-
Q 018293 157 CNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV--AADVESLAWDPHAEHSFVVSLEDG- 231 (358)
Q Consensus 157 ~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~dg- 231 (358)
.+..+. .+...+..+++++++ +++++...++.|.+||.... ........ ...+..+++++++ +++++...++
T Consensus 153 ~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~-~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~ 229 (286)
T 1q7f_A 153 VLHKFGCSKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYEGQ-YLRQIGGEGITNYPIGVGINSNG-EILIADNHNNF 229 (286)
T ss_dssp EEEEEECTTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETTCC-EEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSC
T ss_pred EEEEeCCCCccCCcEEEEECCCC-CEEEEECCCCEEEEEcCCCC-EEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCE
Confidence 555553 344568999999998 77777778999999997532 22211111 2468899999965 5777777775
Q ss_pred eEEEEEcccCCCCCCCCCCCccEEEeecC--CceeEEEecCCCCcEEEEEeCCCcEEEEecCCCC
Q 018293 232 TIKGFDIRTAKSDPDSTSQQSSFTLHAHD--KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294 (358)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 294 (358)
.|.+||.. + ..+..+..+. ..+.+++++|++ +++++ +.++.|++|++....
T Consensus 230 ~i~~~~~~-g---------~~~~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 230 NLTIFTQD-G---------QLISALESKVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEEECTT-S---------CEEEEEEESSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSCCC
T ss_pred EEEEECCC-C---------CEEEEEcccCCCCcceeEEECCCC-cEEEE-CCCCeEEEEEccccc
Confidence 99999964 2 4444554443 246799999988 66666 679999999986654
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.73 E-value=7.3e-15 Score=130.65 Aligned_cols=266 Identities=12% Similarity=0.061 Sum_probs=173.1
Q ss_pred EEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEEcc--cccCcCceeecCCcccc
Q 018293 23 EVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD--VIDEVQPHVILGGIDEE 100 (358)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~~--~~~~~~~~~~~~~~~~~ 100 (358)
.++++|.... .+.. .......+- .+.|+|||+++++++.|+.|.+||+. +.+....
T Consensus 178 ~V~viD~~t~---~v~~--~i~~g~~p~-------~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~---------- 235 (567)
T 1qks_A 178 QIALIDGSTY---EIKT--VLDTGYAVH-------ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE---------- 235 (567)
T ss_dssp EEEEEETTTC---CEEE--EEECSSCEE-------EEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE----------
T ss_pred eEEEEECCCC---eEEE--EEeCCCCcc-------ceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE----------
Confidence 8888998765 2221 111211121 34569999999999999999999985 3322211
Q ss_pred cccccccCCceeccccccCCCcccEEEEecC----CCCCcEEEEEEcCCeEEEEECCCCceeeeecc----------ccc
Q 018293 101 KKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN----KEFRNILASASADKQVKIWDVAAGKCNLTLEH----------HTD 166 (358)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~----------~~~ 166 (358)
+.. ......++|+ |+|..++++...+++|.++|..+.+.+..+.. |..
T Consensus 236 -----------------i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~ 297 (567)
T 1qks_A 236 -----------------IKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPE 297 (567)
T ss_dssp -----------------EEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESC
T ss_pred -----------------Eec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCC
Confidence 111 1235789999 68555555566679999999999988877642 112
Q ss_pred -ceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc-eeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCC
Q 018293 167 -KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF-KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSD 244 (358)
Q Consensus 167 -~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 244 (358)
.+..+..+++++.+++....+|.|.++|....+.... ..........+.|+|++..++++...++.|.++|..++
T Consensus 298 ~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~--- 374 (567)
T 1qks_A 298 PRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG--- 374 (567)
T ss_dssp CCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT---
T ss_pred CceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC---
Confidence 5778888998867777777889999999876542221 12234456788999977655666667899999999987
Q ss_pred CCCCCCCccEEEee-----cCCceeEEEecCCCCcEEEEEe-CCCcEEEEecCCCC-----ceeeEecCCCCceeEEEEE
Q 018293 245 PDSTSQQSSFTLHA-----HDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLSNNQ-----PSCIASRNPKAGAVFSVAF 313 (358)
Q Consensus 245 ~~~~~~~~~~~~~~-----~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~d~~~~~-----~~~~~~~~~~~~~v~~~~~ 313 (358)
+....+.. |.+.-..+ ++|+++.+.+++. .++.|.++|..+.+ ...+..+......-..+..
T Consensus 375 ------kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~ 447 (567)
T 1qks_A 375 ------KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKT 447 (567)
T ss_dssp ------EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEEC
T ss_pred ------cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEe
Confidence 44444432 32211122 5787545555554 46899999998722 2234444333233344778
Q ss_pred cCCCCeEEEEEcc------CCeEEEEEccCC
Q 018293 314 SEDSPFVLAIGGS------KGKLEIWDTLSD 338 (358)
Q Consensus 314 ~~~~~~~l~~~~~------dg~i~vw~~~~~ 338 (358)
+|+++++++.... .+.|.++|+.+.
T Consensus 448 ~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 448 HPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp CTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 9999986664421 358999999876
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=2.3e-15 Score=125.85 Aligned_cols=235 Identities=9% Similarity=0.016 Sum_probs=160.2
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 143 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 143 (358)
+++++++...++.|.+||..+++..... ........++++++ +.++++...
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i----------------------------~~~~~p~~i~~~~~-g~lyv~~~~ 103 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRI----------------------------TGFTSPRYIHFLSD-EKAYVTQIW 103 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEE----------------------------ECCSSEEEEEEEET-TEEEEEEBS
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEc----------------------------CCCCCCcEEEEeCC-CeEEEEECC
Confidence 4556666667899999999875543321 12356788999888 455555448
Q ss_pred CCeEEEEECCCCceeeeecccc-----cceeeEEEcCCCCcEEEEEe-CCCcEEEEEcccCCCccceeeecCCeeeEEEc
Q 018293 144 DKQVKIWDVAAGKCNLTLEHHT-----DKVQAVAWNHHSPQILLSGS-FDRSVVMKDARISTHSGFKWAVAADVESLAWD 217 (358)
Q Consensus 144 dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 217 (358)
++.|.+||..+++....+.... .....+++ .++ .++++.. .++.|.++|+.+.+.... .........++++
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~~~~-i~~g~~p~~i~~~ 180 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDKVVDE-LTIGIQPTSLVMD 180 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTEEEEE-EECSSCBCCCEEC
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCeEEEE-EEcCCCccceEEc
Confidence 8999999999998877765332 14567777 333 5444443 488999999988765442 2334556789999
Q ss_pred CCCCCeEEEEecC----------CeEEEEEcccCCCCCCCCCCCccEEEeec-CCceeEEEecCCCCcEEEEEeCCCcEE
Q 018293 218 PHAEHSFVVSLED----------GTIKGFDIRTAKSDPDSTSQQSSFTLHAH-DKAVCTISYNPLVPNLLATGSTDKMVK 286 (358)
Q Consensus 218 ~~~~~~~~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~~l~~~~~dg~i~ 286 (358)
|++. +++++..+ +.|.++|..+. +....+... ......++++|++ ..|+++.. .|.
T Consensus 181 ~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~---------~v~~~~~~~~g~~p~~la~~~d~-~~lyv~~~--~v~ 247 (328)
T 3dsm_A 181 KYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETF---------TVEKQFKFKLGDWPSEVQLNGTR-DTLYWINN--DIW 247 (328)
T ss_dssp TTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTT---------EEEEEEECCTTCCCEEEEECTTS-CEEEEESS--SEE
T ss_pred CCCC-EEEEECCCccCCccccCCceEEEEECCCC---------eEEEEEecCCCCCceeEEEecCC-CEEEEEcc--EEE
Confidence 9654 55555443 78999999876 444444322 2357899999988 66666544 899
Q ss_pred EEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEE----ccCCeEEEEEccCCCccccc
Q 018293 287 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG----GSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 287 i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----~~dg~i~vw~~~~~~~~~~~ 344 (358)
+||..+++................++++|++..++++. ..++.|.+||.. ++.+.+.
T Consensus 248 ~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 248 RMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp EEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred EEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 99998877422111222245688999999655578877 678999999998 7766543
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.72 E-value=8.6e-14 Score=114.64 Aligned_cols=274 Identities=10% Similarity=0.064 Sum_probs=173.9
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~ 81 (358)
.+.|+|+++++....+ .++.|+.. + .+...........+.. ++++++|+++++...++.|..|+
T Consensus 21 ~~d~~g~l~v~~~~~~-----~v~~~d~~-~---~~~~~~~~~~~~~~~~-------i~~~~~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 21 TVSDKGKVWITQHKAN-----MISCINLD-G---KITEYPLPTPDAKVMC-------LTISSDGEVWFTENAANKIGRIT 84 (299)
T ss_dssp EECTTSCEEEEETTTT-----EEEEECTT-C---CEEEEECSSTTCCEEE-------EEECTTSCEEEEETTTTEEEEEC
T ss_pred EECCCCCEEEEecCCC-----cEEEEcCC-C---CeEEecCCcccCceee-------EEECCCCCEEEeCCCCCeEEEEC
Confidence 4678888777664344 77788766 3 2211110001122223 34478999888877788999998
Q ss_pred cccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee-
Q 018293 82 LDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT- 160 (358)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~- 160 (358)
.+. . .... .+......+.++++.++ +.++++...++.|..||. +++....
T Consensus 85 ~~g-~-~~~~-------------------------~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~-~g~~~~~~ 135 (299)
T 2z2n_A 85 KKG-I-IKEY-------------------------TLPNPDSAPYGITEGPN-GDIWFTEMNGNRIGRITD-DGKIREYE 135 (299)
T ss_dssp TTS-C-EEEE-------------------------ECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT-TCCEEEEE
T ss_pred CCC-c-EEEE-------------------------eCCCcCCCceeeEECCC-CCEEEEecCCceEEEECC-CCCEEEec
Confidence 751 1 1100 01123457889999998 567777667889999998 5544322
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc-eeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcc
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF-KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 239 (358)
.......+..+++.+++ .++++...++.|..||. +++.... .......+..++++++ +.++++...++.|..||.
T Consensus 136 ~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~- 211 (299)
T 2z2n_A 136 LPNKGSYPSFITLGSDN-ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGND-DALWFVEIIGNKIGRITT- 211 (299)
T ss_dssp CSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECT-
T ss_pred CCCCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC-CCEEEEccCCceEEEECC-
Confidence 22344568899999998 77777767789999998 4443221 1112345788999996 446666656889999998
Q ss_pred cCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCe
Q 018293 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 319 (358)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 319 (358)
++. ........+...+.++++++++ +++++...++.|..||. +++. .......+...+.++++ +++.
T Consensus 212 ~g~--------~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~g~- 278 (299)
T 2z2n_A 212 SGE--------ITEFKIPTPNARPHAITAGAGI-DLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGICF-DGET- 278 (299)
T ss_dssp TCC--------EEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE-CSSC-
T ss_pred CCc--------EEEEECCCCCCCceeEEECCCC-CEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEEe-cCCC-
Confidence 441 1112223344678899999988 66666556789999998 3432 22333444567899999 8888
Q ss_pred EEEEEccCCeEEEEEccCC
Q 018293 320 VLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 320 ~l~~~~~dg~i~vw~~~~~ 338 (358)
++++.. .+.+..++..++
T Consensus 279 l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 279 IWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EEEEET-TTEEEEEEEC--
T ss_pred EEEEec-CCcEEEEEcCcc
Confidence 566544 567888887664
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.71 E-value=1.3e-14 Score=120.47 Aligned_cols=244 Identities=10% Similarity=0.067 Sum_probs=159.1
Q ss_pred cccCCCceEEe-------cCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCC
Q 018293 60 KDREKGNFMAV-------GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK 132 (358)
Q Consensus 60 ~~s~~~~~l~~-------g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 132 (358)
+|+++|+++++ +..++.|.+||..+++... ... ....++...+.++++++
T Consensus 24 ~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~----------------------~~~~~~~~~~~~i~~~~ 80 (314)
T 1pjx_A 24 VFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICK----------------------PEVNGYGGIPAGCQCDR 80 (314)
T ss_dssp EECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EEC----------------------CEETTEECCEEEEEECS
T ss_pred eECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEe----------------------cccCCCCCCCceEEEec
Confidence 34788988888 6778999999976543211 000 00112456789999999
Q ss_pred CCCcEEEEEEcCCeEEEEECCCCceeee-ecc----cccceeeEEEcCCCCcEEEEEeCC---------------CcEEE
Q 018293 133 EFRNILASASADKQVKIWDVAAGKCNLT-LEH----HTDKVQAVAWNHHSPQILLSGSFD---------------RSVVM 192 (358)
Q Consensus 133 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~l~~~~~d---------------g~i~i 192 (358)
++++++ .++..+.|.+||.+ ++.... ... ....+.++++.+++ +++++...+ +.|..
T Consensus 81 ~~g~l~-v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 81 DANQLF-VADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SSSEEE-EEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred CCCcEE-EEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEE
Confidence 833344 44445579999988 765433 221 12457899999998 777666554 56777
Q ss_pred EEcccCCCccceeeecCCeeeEEEc----CCCCCeEEEEecCCeEEEEEccc-CCCCCCCCCCCccEEEeecC-CceeEE
Q 018293 193 KDARISTHSGFKWAVAADVESLAWD----PHAEHSFVVSLEDGTIKGFDIRT-AKSDPDSTSQQSSFTLHAHD-KAVCTI 266 (358)
Q Consensus 193 ~d~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~-~~i~~i 266 (358)
+|.. ++. ............++|+ |++..++++...++.|.+||... +.... ......+..+. .....+
T Consensus 158 ~~~~-g~~-~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~----~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 158 FTTD-GQM-IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN----KKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp ECTT-SCE-EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE----EEEEEECCCCSSCEEEEE
T ss_pred ECCC-CCE-EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc----ceEEEECCCCCCCCCCce
Confidence 7764 332 2223334556889999 86554555556789999999862 21000 01122223333 567889
Q ss_pred EecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 267 SYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 267 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
+++++| +++++...++.|.+||..+++... .+..+...+.+++|+|+++.++++...++.|..|++...
T Consensus 232 ~~d~~G-~l~v~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 232 DFDEDN-NLLVANWGSSHIEVFGPDGGQPKM--RIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEBTTC-CEEEEEETTTEEEEECTTCBSCSE--EEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EECCCC-CEEEEEcCCCEEEEEcCCCCcEeE--EEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 999988 777777778899999998665332 233344678999999999866777777789999998753
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.70 E-value=1e-14 Score=118.48 Aligned_cols=213 Identities=11% Similarity=0.006 Sum_probs=154.1
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCc-ccEEEEecCCCCCcEEEEE
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT-DSVLGLAWNKEFRNILASA 141 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~ 141 (358)
..+++|++++.++.|++||..+++.+.... .+. ..+.++.++|+ +++++
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~---------------------------~~~~~~~~~~~~~pd-G~ilv-- 52 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYP---------------------------LEKGWECNSVAATKA-GEILF-- 52 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEE---------------------------CCTTCCCCEEEECTT-SCEEE--
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeC---------------------------CCccCCCcCeEECCC-CCEEE--
Confidence 356899999999999999997766544321 232 45788899999 56777
Q ss_pred EcCCeEEEEECCCCceeeeeccc-ccceeeEEEcCCCCcEEEEEeC-CCcEEEEEcccCCCcccee------eecCCeee
Q 018293 142 SADKQVKIWDVAAGKCNLTLEHH-TDKVQAVAWNHHSPQILLSGSF-DRSVVMKDARISTHSGFKW------AVAADVES 213 (358)
Q Consensus 142 ~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~------~~~~~i~~ 213 (358)
+.++.|..||. +++.+..+..+ ...+.++.+.+++ +++++.+. ++.+..+|. +++.+.... ........
T Consensus 53 s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 53 SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDG-NALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQ 129 (276)
T ss_dssp ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTS-CEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSC
T ss_pred eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCC-CEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccC
Confidence 45788999998 89999888764 3578899999999 78888776 777877775 333322111 11123455
Q ss_pred EEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCC
Q 018293 214 LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293 (358)
Q Consensus 214 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~ 293 (358)
++..++ ++++++...++.|..||.. + +.+..+... ....++...+++ ++++++..++.|..+|..++
T Consensus 130 v~~~~~-G~~lv~~~~~~~v~~~d~~-G---------~~~w~~~~~-~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 130 INKNKK-GNYLVPLFATSEVREIAPN-G---------QLLNSVKLS-GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp CEECTT-SCEEEEETTTTEEEEECTT-S---------CEEEEEECS-SCCCEEEECTTS-CEEEECBTTSEEEEECTTTC
T ss_pred ceECCC-CCEEEEecCCCEEEEECCC-C---------CEEEEEECC-CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCC
Confidence 677885 5588888899999999987 6 666666654 345667788887 88888888889999999988
Q ss_pred CceeeEecCCC------CceeEEEEEcCCCCeEEEEE
Q 018293 294 QPSCIASRNPK------AGAVFSVAFSEDSPFVLAIG 324 (358)
Q Consensus 294 ~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~ 324 (358)
+. +..+..+ -..+..++..++|. ++++.
T Consensus 197 ~~--~w~~~~~~~~~~~l~~~~~~~~~~~G~-i~v~~ 230 (276)
T 3no2_A 197 RI--VRRVNANDIEGVQLFFVAQLFPLQNGG-LYICN 230 (276)
T ss_dssp CE--EEEEEGGGSBSCCCSEEEEEEECTTSC-EEEEE
T ss_pred cE--EEEecCCCCCCccccccccceEcCCCC-EEEEe
Confidence 84 3333221 23478889999998 56655
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.70 E-value=2.6e-14 Score=132.15 Aligned_cols=246 Identities=8% Similarity=-0.010 Sum_probs=159.9
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCe-----
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPA----- 76 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~----- 76 (358)
.+||+|+.|+.+...+......+++++...+........+ . ....+ .|+|||+.|+.++.++.
T Consensus 131 ~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~---~--~~~~~-------~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER---V--KFSCM-------AWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE---E--CSCCE-------EECTTSSEEEEEECCCCSSCCS
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC---c--ccceE-------EEEeCCCEEEEEEECCcccccc
Confidence 6899999999987765334458899998775221111111 0 12234 44999999998887765
Q ss_pred -----------EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc--
Q 018293 77 -----------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA-- 143 (358)
Q Consensus 77 -----------i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-- 143 (358)
|++|++.++..... .+.....|...+..+.|+|+| ++|+.++.
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~-----------------------~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~ 254 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDI-----------------------LCAEFPDEPKWMGGAELSDDG-RYVLLSIREG 254 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCE-----------------------EEECCTTCTTCEEEEEECTTS-CEEEEEEECS
T ss_pred ccccccCCCCEEEEEECCCCcccce-----------------------EEeccCCCCeEEEEEEEcCCC-CEEEEEEEcc
Confidence 99999875432111 111122355668899999995 56665554
Q ss_pred ---CCeEEEEECCC------Cc-eeeeecccccceeeEEEcCCCCcEEEEEeCC---CcEEEEEcccCCC--ccceeeec
Q 018293 144 ---DKQVKIWDVAA------GK-CNLTLEHHTDKVQAVAWNHHSPQILLSGSFD---RSVVMKDARISTH--SGFKWAVA 208 (358)
Q Consensus 144 ---dg~v~iwd~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~--~~~~~~~~ 208 (358)
+..|.+||+.+ +. ....+..+...+.. .|++++..+++.+..+ +.|.+||+.++.. ......+.
T Consensus 255 ~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 255 CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred CCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC
Confidence 56899999986 43 35555555555554 4888884444444433 3699999887642 12233333
Q ss_pred C--CeeeEEEcCCCCCeEEEEecCCe--EEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC---
Q 018293 209 A--DVESLAWDPHAEHSFVVSLEDGT--IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST--- 281 (358)
Q Consensus 209 ~--~i~~~~~~~~~~~~~~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~--- 281 (358)
. .+..++|++ ++.++++...++. |.+||+.++ .....+..+...+..+.++|++..++++.+.
T Consensus 334 ~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g---------~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~ 403 (710)
T 2xdw_A 334 EKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATG---------ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLS 403 (710)
T ss_dssp SSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTTC---------CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSC
T ss_pred CCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCC---------CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCC
Confidence 3 577889986 5567888888885 555666444 4456666677788999999988445555443
Q ss_pred CCcEEEEecCCCC
Q 018293 282 DKMVKLWDLSNNQ 294 (358)
Q Consensus 282 dg~i~i~d~~~~~ 294 (358)
.+.|+.||+.+++
T Consensus 404 P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 404 PGIIYHCDLTKEE 416 (710)
T ss_dssp CCEEEEEETTSSS
T ss_pred CCEEEEEECCCCc
Confidence 4679999998876
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=5e-15 Score=124.91 Aligned_cols=187 Identities=11% Similarity=0.080 Sum_probs=124.2
Q ss_pred ccEEEEecCCCCCcEEEEEEcC---C--eEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeC-----------
Q 018293 123 DSVLGLAWNKEFRNILASASAD---K--QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF----------- 186 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~d---g--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----------- 186 (358)
..+..++|+|+ ++.|+.++.+ + .|.+||+.+++....... .. +..+.|+|++ +.|+.++.
T Consensus 59 ~~~~~~~~SpD-g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 59 ENATMPRISPD-GKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp ESCEEEEECTT-SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECTTS-SEEEEEEECCCC-------
T ss_pred ccCCCeEECCC-CCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECCCC-CEEEEEEccCCCcCCcEEE
Confidence 45788999999 5566666543 3 488889888776554443 34 8999999999 66666553
Q ss_pred ----------------CCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCC-------eEEEEEcccCCC
Q 018293 187 ----------------DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG-------TIKGFDIRTAKS 243 (358)
Q Consensus 187 ----------------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg-------~i~i~d~~~~~~ 243 (358)
...|.+||+.+++....... . .+..+.|+|++ +++++..++ ...+|.+.++
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~-- 208 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDG-- 208 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETT--
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCC--
Confidence 25789999987765222333 4 88899999965 676665542 3455555432
Q ss_pred CCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC--------CcEEEEecCCCCceeeEecCCCCceeEE-EEEc
Q 018293 244 DPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD--------KMVKLWDLSNNQPSCIASRNPKAGAVFS-VAFS 314 (358)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~v~~-~~~~ 314 (358)
....+..+ ..+..+ +|+| +.|+.++.+ ..|.+|| +++ .......+...+.. +.|+
T Consensus 209 --------~~~~l~~~-~~~~~~--spdg-~~l~~~~~~~~~~~~~~~~l~~~d--~~~--~~~l~~~~~~~~~~~~~~s 272 (347)
T 2gop_A 209 --------KEEKMFEK-VSFYAV--DSDG-ERILLYGKPEKKYMSEHNKLYIYD--GKE--VMGILDEVDRGVGQAKIKD 272 (347)
T ss_dssp --------EEEEEEEE-ESEEEE--EECS-SCEEEEECCSSSCCCSSCEEEEEC--SSC--EEESSTTCCSEEEEEEEET
T ss_pred --------ceEEeccC-cceeeE--CCCC-CEEEEEEccccCCccccceEEEEC--CCc--eEeccccCCcccCCccEEc
Confidence 23334334 445544 8998 556555533 3688888 444 23334456677886 8999
Q ss_pred CCCCeEEEEEccCCeEEEEEccCCC
Q 018293 315 EDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 315 ~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
++ ++++++.++.+++| +.+++
T Consensus 273 -dg--~~~~~~~~~~~~l~-~~~g~ 293 (347)
T 2gop_A 273 -GK--VYFTLFEEGSVNLY-IWDGE 293 (347)
T ss_dssp -TE--EEEEEEETTEEEEE-EESSS
T ss_pred -Cc--EEEEEecCCcEEEE-EcCCc
Confidence 77 68888999999999 87544
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.69 E-value=2.2e-14 Score=133.19 Aligned_cols=289 Identities=8% Similarity=0.028 Sum_probs=172.4
Q ss_pred ccCCCcEEEEEEecCCCceEEEEEEeccC--CCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCC-----C
Q 018293 3 INPNDAVIVCARNEDDVSHLEVYILEESD--GGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-----P 75 (358)
Q Consensus 3 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g 75 (358)
.+|+|..++....++....-.+|..+... +.....+...+...... .+....++|||||++||.+..+ .
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~----~~~~~~~~~SPDG~~la~~~~~~G~e~~ 189 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDG----ATALDAWAASDDGRLLAYSVQDGGSDWR 189 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC--------EEEEEEEECTTSSEEEEEEEETTCSEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCC----CEEEEeEEECCCCCEEEEEEcCCCCceE
Confidence 35889998888776533345678777641 22223322221111100 0111244569999999876543 4
Q ss_pred eEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCe---------
Q 018293 76 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ--------- 146 (358)
Q Consensus 76 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~--------- 146 (358)
.|++||+.+++.... ..+...+..++|+|+ . .|+.++.++.
T Consensus 190 ~i~v~dl~tg~~~~~----------------------------~~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 190 TVKFVGVADGKPLAD----------------------------ELKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEETTTCCEEEE----------------------------EEEEEESCCCEESTT-S-EEEEEECCCC--------C
T ss_pred EEEEEECCCCCCCCc----------------------------cCCCceeccEEEECC-C-EEEEEEecCcccccccccC
Confidence 699999987654221 001122357899999 5 5555555543
Q ss_pred -----EEEEECCCCce----eeeecccccceeeEEEcCCCCcEEEEEeCC-----CcEEEEEcccC--CCccceeeecCC
Q 018293 147 -----VKIWDVAAGKC----NLTLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARIS--THSGFKWAVAAD 210 (358)
Q Consensus 147 -----v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~--~~~~~~~~~~~~ 210 (358)
|.+|++.++.. +.....+...+..+.|+|+| ++++..+.+ ..|.+||+.++ +...........
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDG-RWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 89999977652 22222333458899999999 666665543 38999999876 312223333334
Q ss_pred eeeEEEcCCCCCeEEEEec----CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEE
Q 018293 211 VESLAWDPHAEHSFVVSLE----DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVK 286 (358)
Q Consensus 211 i~~~~~~~~~~~~~~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~ 286 (358)
..... .|+++ .++..+. ++.|.+||+.+.. . .....+..+...+..+.+. ++ .++++...|+..+
T Consensus 319 ~~~~~-~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~--~-----~~~~l~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~ 387 (741)
T 1yr2_A 319 QWDFV-DGVGD-QLWFVSGDGAPLKKIVRVDLSGST--P-----RFDTVVPESKDNLESVGIA-GN-RLFASYIHDAKSQ 387 (741)
T ss_dssp CEEEE-EEETT-EEEEEECTTCTTCEEEEEECSSSS--C-----EEEEEECCCSSEEEEEEEE-BT-EEEEEEEETTEEE
T ss_pred eEEEE-eccCC-EEEEEECCCCCCCEEEEEeCCCCc--c-----ccEEEecCCCCeEEEEEEE-CC-EEEEEEEECCEEE
Confidence 44443 46555 4544443 4569999987631 0 1222334445556677777 33 7888888899877
Q ss_pred EEecC-CCCceeeEecCC-CCceeEEEEEcCCCCeEEEEEc---cCCeEEEEEccCCC
Q 018293 287 LWDLS-NNQPSCIASRNP-KAGAVFSVAFSEDSPFVLAIGG---SKGKLEIWDTLSDA 339 (358)
Q Consensus 287 i~d~~-~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~---~dg~i~vw~~~~~~ 339 (358)
+|.+. +++ ....+.. ..+.+..+.++|++..++++.+ ..+.|++||+.+++
T Consensus 388 l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 388 VLAFDLDGK--PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEETTSC--EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEeCCCC--ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 77554 233 2333332 3567889999999876554443 34789999998766
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.69 E-value=3.5e-13 Score=114.17 Aligned_cols=287 Identities=13% Similarity=0.044 Sum_probs=175.8
Q ss_pred cCCCcEEEEEEe-cCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecC----------
Q 018293 4 NPNDAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS---------- 72 (358)
Q Consensus 4 ~p~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~---------- 72 (358)
.|+++.+.+... ..+ ....+++|+.... .+. ...... ..+ .+.+||||++|+++.
T Consensus 29 ~~~~~~~yv~~~~~~~-~~~~v~v~D~~t~---~~~--~~i~~g-------~~p-~i~~spDg~~lyv~n~~~~~~~rg~ 94 (373)
T 2mad_H 29 GADGRRSYINLPAHHS-AIIQQWVLDAGSG---SIL--GHVNGG-------FLP-NPVAAHSGSEFALASTSFSRIAKGK 94 (373)
T ss_pred CCCCCEEEEeCCcccC-CccEEEEEECCCC---eEE--EEecCC-------CCC-CeEECCCCCEEEEEeccccccccCC
Confidence 467777777743 221 1117788887764 221 112221 123 456699999998885
Q ss_pred CCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc--CCeEEEE
Q 018293 73 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKIW 150 (358)
Q Consensus 73 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~--dg~v~iw 150 (358)
.++.|.+||..+.+......+.+. . .. .+......+.|+|+| ++|+.+.. ++.|.++
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~------------------~-~~-~~g~~p~~~~~spDG-~~l~v~n~~~~~~v~vi 153 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDA------------------P-RF-DVGPYSWMNANTPNN-ADLLFFQFAAGPAVGLV 153 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCc------------------c-cc-ccCCCccceEECCCC-CEEEEEecCCCCeEEEE
Confidence 367899999976554443222100 0 00 011234588999994 56666653 5789999
Q ss_pred ECCCCceeee-ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-----eecCC-eeeEEEcCCCCCe
Q 018293 151 DVAAGKCNLT-LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-----AVAAD-VESLAWDPHAEHS 223 (358)
Q Consensus 151 d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~-i~~~~~~~~~~~~ 223 (358)
| .+++.+.. +... . ++.+.|++++.+++.+.||.+.++|. +++...... ....+ .....+.++++.+
T Consensus 154 D-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 227 (373)
T 2mad_H 154 V-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRI 227 (373)
T ss_pred E-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEE
Confidence 9 99988877 6532 2 24566777677888889999999999 655432111 11111 1234556655544
Q ss_pred EEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee----------cCCceeEEEecCCCCcEEEEEeC----------CC
Q 018293 224 FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA----------HDKAVCTISYNPLVPNLLATGST----------DK 283 (358)
Q Consensus 224 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~i~~~~~~~~~l~~~~~----------dg 283 (358)
+++. ..+.+.+.|+..... .....+.. .......+.++|++ ..+++... ++
T Consensus 228 ~~~~-~~~~v~vid~~~~~~-------~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~-~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 228 VWPV-YSGKILQADISAAGA-------TNKAPIDALSGGRKADTWRPGGWQQVAYLKSS-DGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred EEEc-CCceEEEEeccCCcc-------eEeeeeeecCCcccccceecCceEeEEECCCC-CEEEEEeccCCcccccCCCC
Confidence 4444 678999999875421 11111110 12224457889988 44444432 35
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEc-cCCeEEEEEccCCCcccc
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~ 343 (358)
.|.++|..+.+.. ..+. -.....+++|+|||+++++++. .++.|.+||+.+++.+.+
T Consensus 299 ~V~VID~~t~~vv--~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 299 EVTSVTGLVGQTS--SQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred eEEEEECCCCEEE--EEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 7999999988743 3332 2235788999999994455555 589999999999998866
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=1.5e-14 Score=117.47 Aligned_cols=236 Identities=9% Similarity=0.042 Sum_probs=152.3
Q ss_pred cccCCCcEEE-EEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEE
Q 018293 2 TINPNDAVIV-CARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 80 (358)
Q Consensus 2 ~~~p~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw 80 (358)
.+.|+|++++ +....+ .++.|+..... ...+.. .....+. .++++++|+++++.. ++.|.+|
T Consensus 30 ~~~~~g~l~v~~~~~~~-----~i~~~~~~~~~-~~~~~~---~~~~~p~-------~i~~~~~g~l~v~~~-~~~i~~~ 92 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGMYG-----RVVKLATGSTG-TTVLPF---NGLYQPQ-------GLAVDGAGTVYVTDF-NNRVVTL 92 (270)
T ss_dssp EECTTCCEEEEECSSSC-----EEEEECC------EECCC---CSCCSCC-------CEEECTTCCEEEEET-TTEEEEE
T ss_pred EECCCCCEEEEccCCCC-----cEEEecCCCcc-cceEee---CCcCCcc-------eeEECCCCCEEEEcC-CCEEEEE
Confidence 5678898766 333333 67777765431 111100 0011222 344588998777766 8899999
Q ss_pred EcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeee
Q 018293 81 DLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT 160 (358)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 160 (358)
|.+...... ........+.++++.++ ++++++...++.|.+|+..+......
T Consensus 93 d~~~~~~~~---------------------------~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 93 AAGSNNQTV---------------------------LPFDGLNYPEGLAVDTQ-GAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp CTTCSCCEE---------------------------CCCCSCSSEEEEEECTT-CCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred eCCCceEee---------------------------eecCCcCCCcceEECCC-CCEEEEECCCCEEEEEECCCceeEee
Confidence 976422110 00122356889999998 55777777788999998655543332
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEccc
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 240 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~ 240 (358)
.......+.++++++++ +++++...++.|.+||................+..+++++++ +++++...++.|.+||...
T Consensus 145 ~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp CCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTC
T ss_pred ccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCC
Confidence 22233467899999998 677777778899999987654332222222568899999965 5777777788999999865
Q ss_pred CCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCC
Q 018293 241 AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294 (358)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 294 (358)
. ........+...+.+++++|+| +++++...++.|+++++...+
T Consensus 223 ~---------~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 223 T---------TSTVLPFTGLNTPLAVAVDSDR-TVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp S---------CCEECCCCSCSCEEEEEECTTC-CEEEEEGGGTEEEEECCCGGG
T ss_pred C---------cceeeccCCCCCceeEEECCCC-CEEEEECCCCEEEEEcCCCcc
Confidence 4 2111112233568899999998 788888889999999987655
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.67 E-value=1e-13 Score=123.29 Aligned_cols=237 Identities=10% Similarity=0.027 Sum_probs=162.3
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 141 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 141 (358)
++.+.++++...++.|.++|..+++.+.... ....+..+.|+|+ +++++++
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~----------------------------~g~~p~~v~~SpD-Gr~lyv~ 214 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLD----------------------------TGYAVHISRLSAS-GRYLFVI 214 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEE----------------------------CSSCEEEEEECTT-SCEEEEE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEe----------------------------CCCCccceEECCC-CCEEEEE
Confidence 3455677888889999999998765443221 2234668999999 5688888
Q ss_pred EcCCeEEEEECC--CCceeeeecccccceeeEEEc----CCCCcEEEEEeCCCcEEEEEcccCCCccceee---------
Q 018293 142 SADKQVKIWDVA--AGKCNLTLEHHTDKVQAVAWN----HHSPQILLSGSFDRSVVMKDARISTHSGFKWA--------- 206 (358)
Q Consensus 142 ~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------- 206 (358)
+.|+.|.+||+. +++.+.++... .....++|+ |+|...+++...++.+.++|..+.+.+.....
T Consensus 215 ~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~ 293 (567)
T 1qks_A 215 GRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQE 293 (567)
T ss_dssp ETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCC
T ss_pred cCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccccc
Confidence 999999999995 77888877753 346789999 69844445555679999999887766543221
Q ss_pred -e-cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCc
Q 018293 207 -V-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 284 (358)
Q Consensus 207 -~-~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 284 (358)
+ ...+..+..++++..+++....+|.|.++|...... ..+..+ ........+.|+|++..++++...++.
T Consensus 294 ~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~-------~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~ 365 (567)
T 1qks_A 294 YHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN-------LKTTEI-SAERFLHDGGLDGSHRYFITAANARNK 365 (567)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE-------EEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTE
T ss_pred ccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc-------ceeeee-eccccccCceECCCCCEEEEEeCCCCe
Confidence 1 125677888887666666667789999999876421 112222 233456788999999434445556889
Q ss_pred EEEEecCCCCceeeEec---CCCCceeEEEEEcCCCCeEEEEEc-cCCeEEEEEccC
Q 018293 285 VKLWDLSNNQPSCIASR---NPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLS 337 (358)
Q Consensus 285 i~i~d~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~vw~~~~ 337 (358)
|.++|..+++....... ..|.+.-..+ ++|++..+++++. .++.|.++|..+
T Consensus 366 V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 366 LVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 99999999875444333 1243222222 6887554666664 568999999987
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.65 E-value=1.7e-13 Score=112.81 Aligned_cols=227 Identities=9% Similarity=0.055 Sum_probs=147.6
Q ss_pred ccCC-CceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 61 DREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 61 ~s~~-~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
|+++ +.++++...++.|..||..++.... ......+.++++++++ ++++
T Consensus 20 w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-----------------------------~~~~~~~~~i~~~~dG-~l~v 69 (297)
T 3g4e_A 20 WEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-----------------------------VTMDAPVSSVALRQSG-GYVA 69 (297)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEE-----------------------------EECSSCEEEEEEBTTS-SEEE
T ss_pred EECCCCEEEEEECCCCEEEEEECCCCcEEE-----------------------------EeCCCceEEEEECCCC-CEEE
Confidence 3664 5677777788999999987533210 0134578999999994 4554
Q ss_pred EEEcCCeEEEEECCCCceeeeecc----cccceeeEEEcCCCCcEEEEEeCC---------CcEEEEEcccCCCccceee
Q 018293 140 SASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWNHHSPQILLSGSFD---------RSVVMKDARISTHSGFKWA 206 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~ 206 (358)
+ . ++.|.+||.++++....... ....+..++++|+| +++++.... ..-.+|.+...........
T Consensus 70 ~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~ 146 (297)
T 3g4e_A 70 T-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD 146 (297)
T ss_dssp E-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE
T ss_pred E-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCCEEEEee
Confidence 4 3 57899999988765332221 12457889999999 665544321 2334555443322222334
Q ss_pred ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcc--cCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCc
Q 018293 207 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR--TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 284 (358)
Q Consensus 207 ~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 284 (358)
.......++|+|++..++++.+.++.|..||+. ++... ..+....+..+......+++.++| ++.++....+.
T Consensus 147 ~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~----~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~ 221 (297)
T 3g4e_A 147 QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS----NRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGR 221 (297)
T ss_dssp EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE----EEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTE
T ss_pred ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc----CcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCE
Confidence 445678899999776566777778999999984 32100 001122222334567899999998 77777777888
Q ss_pred EEEEecCCCCceeeEecCCCCceeEEEEEc-CCCCeEEEEEccC
Q 018293 285 VKLWDLSNNQPSCIASRNPKAGAVFSVAFS-EDSPFVLAIGGSK 327 (358)
Q Consensus 285 i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~d 327 (358)
|..||..+++. +..+..+...+++++|. |+++.++++...+
T Consensus 222 v~~~d~~tG~~--~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 222 VIRLDPVTGKR--LQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEECTTTCCE--EEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEEcCCCceE--EEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 99999988874 33444445679999998 8888777776544
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.65 E-value=5.1e-13 Score=111.82 Aligned_cols=293 Identities=12% Similarity=0.082 Sum_probs=178.5
Q ss_pred ccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecC----------
Q 018293 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS---------- 72 (358)
Q Consensus 3 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~---------- 72 (358)
..|+++.+.++........-.++++|.... .+. ........| . +.++|||++|+++.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~---~v~--~~I~vG~~P-~-------va~spDG~~lyVan~~~~r~~~G~ 106 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAG---RVI--GMIDGGFLP-N-------PVVADDGSFIAHASTVFSRIARGE 106 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTT---EEE--EEEEECSSC-E-------EEECTTSSCEEEEEEEEEETTEEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCC---eEE--EEEECCCCC-c-------EEECCCCCEEEEEcccccccccCC
Confidence 468999999986531001238999998764 222 122222222 1 34499999998775
Q ss_pred CCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc--CCeEEEE
Q 018293 73 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKIW 150 (358)
Q Consensus 73 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~--dg~v~iw 150 (358)
.++.|.+||..+.+......+..+ ...........+.|+|+| ++++.+.. ++.|.++
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g--------------------~r~~~g~~P~~~a~spDG-k~lyVan~~~~~~VsVI 165 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDA--------------------PRFLVGTYPWMTSLTPDG-KTLLFYQFSPAPAVGVV 165 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTC--------------------CCCCBSCCGGGEEECTTS-SEEEEEECSSSCEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEECCCc--------------------cccccCCCCceEEEcCCC-CEEEEEEcCCCCeEEEE
Confidence 367899999987665544332110 000011235578999995 55655543 6899999
Q ss_pred ECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEccc-CCCccceeee----cCCe-eeEEEcCCCCCeE
Q 018293 151 DVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHSGFKWAV----AADV-ESLAWDPHAEHSF 224 (358)
Q Consensus 151 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~----~~~i-~~~~~~~~~~~~~ 224 (358)
|+.+++.+.++.... . ....|.+.+.+++.+.||.+.+.++.. ++........ ..++ ....|.+.++ .+
T Consensus 166 D~~t~~vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG-~~ 240 (386)
T 3sjl_D 166 DLEGKAFKRMLDVPD--C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG-RL 240 (386)
T ss_dssp ETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT-EE
T ss_pred ECCCCcEEEEEECCC--c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC-cE
Confidence 999999988885322 1 223355556778888899999999876 3331100011 1112 1245543234 34
Q ss_pred EEEecCCeEEEEEcccCCCCCCCCCCCccEEEe----------ecCCceeEEEecCCCCcEEEEEeC---------CCcE
Q 018293 225 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH----------AHDKAVCTISYNPLVPNLLATGST---------DKMV 285 (358)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~i~~~~~~~~~l~~~~~---------dg~i 285 (358)
+..+.+|.|.+.|+..... .....+. -.......++++|++.+++++-.. .+.|
T Consensus 241 ~~vs~~g~V~v~d~~~~~~-------~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V 313 (386)
T 3sjl_D 241 VWPTYTGKIHQIDLSSGDA-------KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFV 313 (386)
T ss_dssp EEEBTTSEEEEEECTTSSC-------EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEE
T ss_pred EEEeCCCEEEEEECCCCcc-------eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEE
Confidence 3455689999999976521 1111111 012234457778988444443321 2469
Q ss_pred EEEecCCCCceeeEecCCCCceeEEEEEcCCCC-eEEEEEccCCeEEEEEccCCCccccc
Q 018293 286 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP-FVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 286 ~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
.++|+.+.+........ ..+.++++++|++ .++++...++.|.++|..+++.+.+.
T Consensus 314 ~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 314 VVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp EEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence 99999999854333332 4688999999996 44555667899999999999877654
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=3.7e-14 Score=130.70 Aligned_cols=247 Identities=9% Similarity=-0.030 Sum_probs=156.6
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCe-----
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPA----- 76 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~----- 76 (358)
.+||+|+.|+.+...+......+++++...+.... .. .++... ...+.|+|||+.|+.++.|..
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~---~~~~~~------~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VD---VIEGGK------YATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SC---CBSCCT------TCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--Cc---ccCccc------ccceEEecCCCEEEEEEecCCCCCcc
Confidence 68999999998866543233588999987753210 00 111110 024556999999999888766
Q ss_pred --------EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCC---
Q 018293 77 --------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK--- 145 (358)
Q Consensus 77 --------i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg--- 145 (358)
|++|++.++.... ..+.....|...+..+.|+|+| ++|+.++.++
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~-----------------------~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~ 251 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKD-----------------------TVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSE 251 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGC-----------------------EEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTE
T ss_pred ccCCCCCEEEEEECCCCchhc-----------------------eEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCc
Confidence 9999997644211 1112223466778999999995 4565555555
Q ss_pred -eEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEe---CCCcEEEEEcccCCC--ccceeee--cCCeeeEEEc
Q 018293 146 -QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGS---FDRSVVMKDARISTH--SGFKWAV--AADVESLAWD 217 (358)
Q Consensus 146 -~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~--~~~~~~~--~~~i~~~~~~ 217 (358)
.|.+|+..+++ ...+..+...+....+ +++ .+++.+. .++.|.+||+.+++. ......+ ...+..++|+
T Consensus 252 ~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 252 NDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKD-RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp EEEEEECTTCSS-CEEEEECSSCCEEEEE-ETT-EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred eEEEEEcCCCCc-eEEeecCCCceEEEEe-cCC-cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE
Confidence 67777665554 3444445555666666 677 4555544 257899999977653 1222222 3457778887
Q ss_pred CCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec-CCceeEEEecCCCCcEEEEEeC---CCcEEEEecCCC
Q 018293 218 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-DKAVCTISYNPLVPNLLATGST---DKMVKLWDLSNN 293 (358)
Q Consensus 218 ~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~~l~~~~~---dg~i~i~d~~~~ 293 (358)
++.++++...|+..++|.+... ......+..+ ...+..+.++|++..++++.+. .+.|++||+.++
T Consensus 329 --~~~lv~~~~~dg~~~l~~~~~~--------g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 329 --GGHLSLEYLKDATSEVRVATLK--------GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp --TTEEEEEEEETTEEEEEEEETT--------CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred --CCEEEEEEEECCEEEEEEEeCC--------CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 4558888889999888877632 1333444444 5677888999988445444433 467999999887
Q ss_pred Cce
Q 018293 294 QPS 296 (358)
Q Consensus 294 ~~~ 296 (358)
+..
T Consensus 399 ~~~ 401 (695)
T 2bkl_A 399 KSE 401 (695)
T ss_dssp CEE
T ss_pred cEE
Confidence 743
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.63 E-value=5.1e-13 Score=109.97 Aligned_cols=230 Identities=7% Similarity=0.002 Sum_probs=157.6
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
.++++|+++++...++.|.+||.. +. .... ....+...+.++++.++ +.+++
T Consensus 21 ~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~-------------------------~~~~~~~~~~~i~~~~~-g~l~v 72 (299)
T 2z2n_A 21 TVSDKGKVWITQHKANMISCINLD-GK-ITEY-------------------------PLPTPDAKVMCLTISSD-GEVWF 72 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-CC-EEEE-------------------------ECSSTTCCEEEEEECTT-SCEEE
T ss_pred EECCCCCEEEEecCCCcEEEEcCC-CC-eEEe-------------------------cCCcccCceeeEEECCC-CCEEE
Confidence 347899988877778899999976 22 1110 01123467899999998 55776
Q ss_pred EEEcCCeEEEEECCCCcee-eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-eecCCeeeEEEc
Q 018293 140 SASADKQVKIWDVAAGKCN-LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWD 217 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~ 217 (358)
+...++.|..||.. ++.. ..+......+.++++.+++ .++++...++.|..||. +++...... .....+..++++
T Consensus 73 ~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 73 TENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLG 149 (299)
T ss_dssp EETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred eCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEc
Confidence 66668899999976 4321 1222244578899999988 77777777889999998 433222111 123568899999
Q ss_pred CCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccE-EEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce
Q 018293 218 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSF-TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296 (358)
Q Consensus 218 ~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 296 (358)
+++ +++++...++.|..||. ++ .... ........+.++++.+++ .+.++...++.|.+||. +++.
T Consensus 150 ~~g-~l~v~~~~~~~i~~~~~-~g---------~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~- 215 (299)
T 2z2n_A 150 SDN-ALWFTENQNNAIGRITE-SG---------DITEFKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-SGEI- 215 (299)
T ss_dssp TTS-CEEEEETTTTEEEEECT-TC---------CEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCE-
T ss_pred CCC-CEEEEeCCCCEEEEEcC-CC---------cEEEeeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECC-CCcE-
Confidence 854 56666666789999998 44 2211 123334567899999987 67666666788999999 6653
Q ss_pred eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEc
Q 018293 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335 (358)
Q Consensus 297 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~ 335 (358)
.......+...+.+++++++|+ ++++...++.|..||.
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 216 TEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEET
T ss_pred EEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECC
Confidence 2233344456788999999998 6776667789999998
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.63 E-value=1.2e-13 Score=118.67 Aligned_cols=236 Identities=8% Similarity=0.022 Sum_probs=157.4
Q ss_pred cCCccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCC
Q 018293 56 DCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 135 (358)
Q Consensus 56 ~~~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 135 (358)
|..++++++++++++...++.|++||..++..... ... ..... ++|+++ +
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~---------------------------~~~-~~~~~-ia~~~~-g 182 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTV---------------------------HPG-FKGGK-PAVTKD-K 182 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEE---------------------------EET-CCBCB-CEECTT-S
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEe---------------------------ecc-CCCCc-eeEecC-C
Confidence 34556689999888888889999999875332110 001 12223 899999 5
Q ss_pred cEEEEEEcCC--eEEEEECCCCceeeee----cccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc----ee
Q 018293 136 NILASASADK--QVKIWDVAAGKCNLTL----EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF----KW 205 (358)
Q Consensus 136 ~~l~s~~~dg--~v~iwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~ 205 (358)
..|+++..++ .|.+++...+.....+ ......+.+++++|++ ..|+.+..++.|+.||..+...... ..
T Consensus 183 ~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~-g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~ 261 (409)
T 3hrp_A 183 QRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETE-EWLYFVDSNKNFGRFNVKTQEVTLIKQLELS 261 (409)
T ss_dssp SEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTS-SEEEEECTTCEEEEEETTTCCEEEEEECCCC
T ss_pred CcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCC-CeEEEEECCCcEEEEECCCCCEEEEeccccc
Confidence 5777777765 7999998766543333 2244667899999955 3455577788999999886653221 11
Q ss_pred eecCCe-e-eEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec---------------CCceeEEEe
Q 018293 206 AVAADV-E-SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH---------------DKAVCTISY 268 (358)
Q Consensus 206 ~~~~~i-~-~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~---------------~~~i~~i~~ 268 (358)
.....- . .++|+|+++.++++-..++.|+.|+.... ...+.++ -.....+++
T Consensus 262 g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-----------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~ 330 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-----------CEWFCGSATQKTVQDGLREEALFAQPNGMTV 330 (409)
T ss_dssp SCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-----------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEE
T ss_pred CCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-----------EEEEEeCCCCCCcCCCcccccEeCCCeEEEE
Confidence 111111 3 89999976767777777889999987632 2222222 134689999
Q ss_pred cCCCCcEEEEEe-CCCcEEEEecCCCCceeeEecCC------------CCceeEEEEEcCCCCeEEEEEccCCeEEEEEc
Q 018293 269 NPLVPNLLATGS-TDKMVKLWDLSNNQPSCIASRNP------------KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335 (358)
Q Consensus 269 ~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~ 335 (358)
+|++ +++++-. .++.|+.|++.++....+..... .-.....++++++|. ++++-..++.|+.+++
T Consensus 331 d~dG-~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 331 DEDG-NFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTC-CEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEESTTCEEEEEEE
T ss_pred eCCC-CEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEECCCCeEEEEEe
Confidence 9998 6777777 78899999987775322222100 123578999999976 7888888889988875
No 200
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.63 E-value=7.9e-14 Score=114.83 Aligned_cols=203 Identities=7% Similarity=0.032 Sum_probs=142.3
Q ss_pred CCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCC
Q 018293 120 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 199 (358)
Q Consensus 120 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 199 (358)
.+.....+++|+|++..+++++..++.|..||..++ ...+..+...+.++++++++ .++++...++.|.+||..+++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCc
Confidence 355667899999995448888889999999999877 55666667789999999998 777776667899999997765
Q ss_pred Cccceee----ecCCeeeEEEcCCCCCeEEE----Eec-------------CCeEEEEEcccCCCCCCCCCCCccEEEee
Q 018293 200 HSGFKWA----VAADVESLAWDPHAEHSFVV----SLE-------------DGTIKGFDIRTAKSDPDSTSQQSSFTLHA 258 (358)
Q Consensus 200 ~~~~~~~----~~~~i~~~~~~~~~~~~~~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 258 (358)
....... ....+..++++|++ +++++ |+. .+.|..++.. + . ...+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g---------~-~~~~~~ 169 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G---------T-LSAPIR 169 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S---------C-EEEEEC
T ss_pred EEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-C---------C-EEEeec
Confidence 4332111 12346789999965 46665 321 3455555543 2 2 233445
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCcEEEEecC-CCCc-eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEcc
Q 018293 259 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS-NNQP-SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 259 ~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
+......++|+|++ +.+++.+.++.|.+|++. +++. .....+..+...+..++++++|+ ++++. ++.|.+|+..
T Consensus 170 ~~~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 170 DRVKPNGLAFLPSG-NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPD 245 (296)
T ss_dssp CCSSEEEEEECTTS-CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTT
T ss_pred CCCCCccEEECCCC-CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCC
Confidence 55667899999998 666777888999999997 4442 11122233455677899999998 56655 7899999986
Q ss_pred CCCccc
Q 018293 337 SDAGIS 342 (358)
Q Consensus 337 ~~~~~~ 342 (358)
++.+.
T Consensus 246 -g~~~~ 250 (296)
T 3e5z_A 246 -GDELG 250 (296)
T ss_dssp -SCEEE
T ss_pred -CCEEE
Confidence 55444
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.63 E-value=1.5e-12 Score=107.16 Aligned_cols=272 Identities=10% Similarity=0.031 Sum_probs=170.3
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWD 81 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~ 81 (358)
.+.|+|+++++....+ .+..|+.. + .+...........+. .+.++++|+++++...++.|..||
T Consensus 26 ~~d~~g~l~v~~~~~~-----~v~~~~~~-~---~~~~~~~~~~~~~~~-------~i~~~~~g~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 26 TSSEDGKVWFTQHKAN-----KISSLDQS-G---RIKEFEVPTPDAKVM-------CLIVSSLGDIWFTENGANKIGKLS 89 (300)
T ss_dssp EECTTSCEEEEETTTT-----EEEEECTT-S---CEEEEECSSTTCCEE-------EEEECTTSCEEEEETTTTEEEEEC
T ss_pred eECCCCCEEEEcCCCC-----eEEEECCC-C---ceEEEECCCCCCcce-------eEEECCCCCEEEEecCCCeEEEEC
Confidence 4567888777664444 67777766 3 221110000011222 334478898888877788999998
Q ss_pred cccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceee-e
Q 018293 82 LDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL-T 160 (358)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~ 160 (358)
.. ++. ... ........+.++++.++ +.++++...++.|..+|.. ++... .
T Consensus 90 ~~-g~~-~~~-------------------------~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~-g~~~~~~ 140 (300)
T 2qc5_A 90 KK-GGF-TEY-------------------------PLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD-GTIYEYD 140 (300)
T ss_dssp TT-SCE-EEE-------------------------ECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CC-CCe-EEe-------------------------cCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCC-CCEEEcc
Confidence 75 221 110 11123356889999988 5577766667899999987 55432 2
Q ss_pred ecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcc
Q 018293 161 LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 239 (358)
Q Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 239 (358)
+......+..+++.+++ +++++...++.|..+|. +++...... .....+..+++++++ +++++....+.|..||.
T Consensus 141 ~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~- 216 (300)
T 2qc5_A 141 LPNKGSYPAFITLGSDN-ALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITT- 216 (300)
T ss_dssp CSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-
T ss_pred CCCCCCCceeEEECCCC-CEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcC-
Confidence 23234568899999998 66666666788999998 433322111 123457889999854 56666666778999998
Q ss_pred cCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCe
Q 018293 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 319 (358)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 319 (358)
++. ........+...+.++++.+++ ++.++...++.|..||. +++. ...........+.++++.++|.
T Consensus 217 ~g~--------~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g~- 284 (300)
T 2qc5_A 217 TGE--------ISEYDIPTPNARPHAITAGKNS-EIWFTEWGANQIGRITN-DNTI-QEYQLQTENAEPHGITFGKDGS- 284 (300)
T ss_dssp TCC--------EEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECT-TSCE-EEEECCSTTCCCCCEEECTTSC-
T ss_pred CCc--------EEEEECCCCCCCceEEEECCCC-CEEEeccCCCeEEEECC-CCcE-EEEECCccCCccceeEeCCCCC-
Confidence 331 1112223344568899999988 66666656789999998 4442 2233333345688899999998
Q ss_pred EEEEEccCCeEEEEEcc
Q 018293 320 VLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 320 ~l~~~~~dg~i~vw~~~ 336 (358)
++++.. . .|..+|..
T Consensus 285 l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 285 VWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEEECS-S-EEEEEEEC
T ss_pred EEEEcc-C-ceEEeCCC
Confidence 566444 4 77777653
No 202
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.62 E-value=1.9e-13 Score=114.10 Aligned_cols=229 Identities=7% Similarity=-0.041 Sum_probs=153.5
Q ss_pred cCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEE
Q 018293 71 GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 150 (358)
Q Consensus 71 g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 150 (358)
|+.++.|.+||..+++........ ..-.........+.+.. +.++++...++.|.+|
T Consensus 13 g~~~~~l~~~d~~t~~~~~~i~~~---------------------~n~~~lg~~~~~i~~~~--~~lyv~~~~~~~v~vi 69 (328)
T 3dsm_A 13 QYSNATLSYYDPATCEVENEVFYR---------------------ANGFKLGDVAQSMVIRD--GIGWIVVNNSHVIFAI 69 (328)
T ss_dssp TSCCBEEEEEETTTTEEECSHHHH---------------------HHSSCCBSCEEEEEEET--TEEEEEEGGGTEEEEE
T ss_pred CCCCceEEEEECCCCEEhhhhHhh---------------------hcCcccCccceEEEEEC--CEEEEEEcCCCEEEEE
Confidence 345899999999875543211000 00001223456777743 4566677778999999
Q ss_pred ECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecC------CeeeEEEcCCCCCeE
Q 018293 151 DVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA------DVESLAWDPHAEHSF 224 (358)
Q Consensus 151 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~~~~ 224 (358)
|.++++.+.++. .......+++++++ .++++...++.|.+||..+.+.... ..... ....+++ +++.++
T Consensus 70 D~~t~~~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~-i~~g~~~~~~~~p~~i~~--~~~~ly 144 (328)
T 3dsm_A 70 DINTFKEVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGY-IECPDMDMESGSTEQMVQ--YGKYVY 144 (328)
T ss_dssp ETTTCCEEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEE-EECTTCCTTTCBCCCEEE--ETTEEE
T ss_pred ECcccEEEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEE-EEcCCccccCCCcceEEE--ECCEEE
Confidence 999999988885 34668899998887 6665555899999999987765432 22223 5667777 245444
Q ss_pred EEEe-cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC----------CcEEEEecCCC
Q 018293 225 VVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD----------KMVKLWDLSNN 293 (358)
Q Consensus 225 ~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d----------g~i~i~d~~~~ 293 (358)
++.. .++.|.++|..+. +....+... .....++++|+| ++++++..+ +.|.++|..++
T Consensus 145 v~~~~~~~~v~viD~~t~---------~~~~~i~~g-~~p~~i~~~~dG-~l~v~~~~~~~~~~~~~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 145 VNCWSYQNRILKIDTETD---------KVVDELTIG-IQPTSLVMDKYN-KMWTITDGGYEGSPYGYEAPSLYRIDAETF 213 (328)
T ss_dssp EEECTTCCEEEEEETTTT---------EEEEEEECS-SCBCCCEECTTS-EEEEEBCCBCTTCSSCBCCCEEEEEETTTT
T ss_pred EEcCCCCCEEEEEECCCC---------eEEEEEEcC-CCccceEEcCCC-CEEEEECCCccCCccccCCceEEEEECCCC
Confidence 4444 4889999999886 444455433 345788999988 666665544 78999999888
Q ss_pred CceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 294 QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 294 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
+........ .......++|+|+++.+++ +.. .|.+||..+++...
T Consensus 214 ~v~~~~~~~-~g~~p~~la~~~d~~~lyv-~~~--~v~~~d~~t~~~~~ 258 (328)
T 3dsm_A 214 TVEKQFKFK-LGDWPSEVQLNGTRDTLYW-INN--DIWRMPVEADRVPV 258 (328)
T ss_dssp EEEEEEECC-TTCCCEEEEECTTSCEEEE-ESS--SEEEEETTCSSCCS
T ss_pred eEEEEEecC-CCCCceeEEEecCCCEEEE-Ecc--EEEEEECCCCceee
Confidence 743333322 1236789999999996544 433 89999998887643
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.59 E-value=6.1e-14 Score=117.84 Aligned_cols=172 Identities=15% Similarity=0.112 Sum_probs=128.8
Q ss_pred cEEEEecCCCCCcEEEEEEcCCeEEEEECCCCc-----------eeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEE
Q 018293 124 SVLGLAWNKEFRNILASASADKQVKIWDVAAGK-----------CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM 192 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 192 (358)
.++.+++++. ..++++|+.++ +.+|+++... ..... .+.. |+.++| ++ ..|+++ .++.|++
T Consensus 39 ~~nlLais~~-~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~-~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNS-KSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HG-DQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETT-TTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ET-TEEEEE-ESSEEEE
T ss_pred cccEEEEcCC-CCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CC-CEEEEE-cCCcEEE
Confidence 6899999999 55888888875 6669876433 11222 3566 999999 66 778877 8899999
Q ss_pred EEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC
Q 018293 193 KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 272 (358)
Q Consensus 193 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 272 (358)
||+++.........+...+.++.+.+. .+++++.||.|.+||+... .... +...|++++|+|+|
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~---------~~~~----~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTK---------STKQ----LAQNVTSFDVTNSQ 174 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTC---------CEEE----EEESEEEEEECSSE
T ss_pred EEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCC---------cccc----ccCCceEEEEcCCc
Confidence 999887655545566777888877663 3888899999999999876 2221 44679999999987
Q ss_pred CcEEEEEeCCCcEEEEecCCCCceeeEec------C---CCCceeEEEEEcCCCCeEEE
Q 018293 273 PNLLATGSTDKMVKLWDLSNNQPSCIASR------N---PKAGAVFSVAFSEDSPFVLA 322 (358)
Q Consensus 273 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~~~l~ 322 (358)
++.|..||.+++|+....+......+ . +|...|.++.|.+++.++++
T Consensus 175 ---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 175 ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ---eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 67789999999998877652112223 1 46788999999999986443
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=1.9e-13 Score=110.99 Aligned_cols=190 Identities=15% Similarity=0.090 Sum_probs=139.6
Q ss_pred CcEEEEEEcCCeEEEEECCCCceeeeecccc-cceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeee-cCCee
Q 018293 135 RNILASASADKQVKIWDVAAGKCNLTLEHHT-DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV-AADVE 212 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~ 212 (358)
+++|++++.|+.|.+||.++++.+.++..+. ..+.++.+.|+| ++++ +.++.|..||. +++.+...... ...+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 3689999999999999999999999998765 478899999999 7777 45778999998 66554422222 24677
Q ss_pred eEEEcCCCCCeEEEEec-CCeEEEEEcccCCCCCCCCCCCccEEEee------cCCceeEEEecCCCCcEEEEEeCCCcE
Q 018293 213 SLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHA------HDKAVCTISYNPLVPNLLATGSTDKMV 285 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~------~~~~i~~i~~~~~~~~~l~~~~~dg~i 285 (358)
++.+.+++ +++++.+. ++.+..+|. ++ +.+..+.. +......+++.++| +++++...++.|
T Consensus 81 ~~~~~~dG-~~lv~~~~~~~~v~~vd~-~G---------k~l~~~~~~~~~~~~~~~~~~v~~~~~G-~~lv~~~~~~~v 148 (276)
T 3no2_A 81 TARILPDG-NALVAWCGHPSTILEVNM-KG---------EVLSKTEFETGIERPHAQFRQINKNKKG-NYLVPLFATSEV 148 (276)
T ss_dssp EEEECTTS-CEEEEEESTTEEEEEECT-TS---------CEEEEEEECCSCSSGGGSCSCCEECTTS-CEEEEETTTTEE
T ss_pred ccEECCCC-CEEEEecCCCCEEEEEeC-CC---------CEEEEEeccCCCCcccccccCceECCCC-CEEEEecCCCEE
Confidence 88999955 57777666 777777775 33 33434331 22234566788888 899999999999
Q ss_pred EEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 286 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 286 ~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
..||.. ++. +..+... ....++...++|. ++++++.++.|..+|..+|+.+.+.-
T Consensus 149 ~~~d~~-G~~--~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 149 REIAPN-GQL--LNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEECTT-SCE--EEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EEECCC-CCE--EEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 999998 773 4444332 3455678889998 57777878899999999898876653
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.58 E-value=1.3e-12 Score=111.38 Aligned_cols=293 Identities=12% Similarity=0.085 Sum_probs=175.8
Q ss_pred CCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecC----------CC
Q 018293 5 PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS----------ME 74 (358)
Q Consensus 5 p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~----------~d 74 (358)
|+++.+.++........-.+.++|.... .+. ........| .+ .++|||++|+++. .+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~---~vv--~~I~vG~~P-gi-------a~SpDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG---RIL--GMTDGGFLP-HP-------VAAEDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT---EEE--EEEEECSSC-EE-------EECTTSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC---EEE--EEEECCCCC-ce-------EECCCCCEEEEEeccccccccCCCC
Confidence 4666666664432000158899998764 222 222233333 33 4599999998886 36
Q ss_pred CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc--CCeEEEEEC
Q 018293 75 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKIWDV 152 (358)
Q Consensus 75 g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~--dg~v~iwd~ 152 (358)
+.|.++|..+.+......+.+. . .. ........+.|+|++ ++++.+.. ++.|.+.|+
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~------------------~-r~-~~g~~P~~~~~spDG-k~lyV~n~~~~~~VsVID~ 207 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDA------------------P-RF-LVGTYQWMNALTPDN-KNLLFYQFSPAPAVGVVDL 207 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTC------------------C-CC-CBSCCGGGSEECTTS-SEEEEEECSSSCEEEEEET
T ss_pred CEEEEEECCCCcEEEEEECCCc------------------c-cc-ccCCCcceEEEcCCC-CEEEEEecCCCCeEEEEEC
Confidence 7899999987665544332100 0 00 011234578999994 56666653 689999999
Q ss_pred CCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce---ee-ecCC-eeeEEEcCCCCCeEEEE
Q 018293 153 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK---WA-VAAD-VESLAWDPHAEHSFVVS 227 (358)
Q Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~-~~~~-i~~~~~~~~~~~~~~~~ 227 (358)
.+++.+.++.-... ....|++...+++.+.||.+.+.+..+++..... .. ...+ ...+.+.+++. .++..
T Consensus 208 ~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~-~~~~~ 282 (426)
T 3c75_H 208 EGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG-RLVWP 282 (426)
T ss_dssp TTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC-EEEEE
T ss_pred CCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC-EEEEE
Confidence 99998888763221 3344555567777888888888888444332100 00 0111 12356788655 44455
Q ss_pred ecCCeEEEEEcccCCCCCCCCCCCccEEEe--------ecCCceeEEEecCCCCcEEEEEeC---------CCcEEEEec
Q 018293 228 LEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--------AHDKAVCTISYNPLVPNLLATGST---------DKMVKLWDL 290 (358)
Q Consensus 228 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~i~~~~~~~~~l~~~~~---------dg~i~i~d~ 290 (358)
+..+.+.+.|........ .....+. ........++++|++.+++++... ++.|.++|.
T Consensus 283 s~~g~V~ViD~~~~~~~v-----~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATF-----RAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp BTTSEEEEEEECSSCEEE-----CCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred eCCCcEEEEeccCCceEE-----eeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 678899999986542100 0000000 001112236899998444444331 357999999
Q ss_pred CCCCceeeEecCCCCceeEEEEEcCCCC-eEEEEEccCCeEEEEEccCCCccccc
Q 018293 291 SNNQPSCIASRNPKAGAVFSVAFSEDSP-FVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 291 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
.+.+........ .....+.|+|||+ .++++...++.|.++|+.+++.+.+.
T Consensus 358 ~T~kvv~~I~vg---~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 358 ETGERINKIELG---HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTCCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEECC---CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999843333222 3578899999998 65554446999999999999988764
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.57 E-value=8e-12 Score=102.81 Aligned_cols=231 Identities=9% Similarity=0.015 Sum_probs=156.4
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
.++++|+++++...++.|.+||.. ++. ... .+..+...+.++++.++ +.+++
T Consensus 26 ~~d~~g~l~v~~~~~~~v~~~~~~-~~~-~~~-------------------------~~~~~~~~~~~i~~~~~-g~l~v 77 (300)
T 2qc5_A 26 TSSEDGKVWFTQHKANKISSLDQS-GRI-KEF-------------------------EVPTPDAKVMCLIVSSL-GDIWF 77 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCE-EEE-------------------------ECSSTTCCEEEEEECTT-SCEEE
T ss_pred eECCCCCEEEEcCCCCeEEEECCC-Cce-EEE-------------------------ECCCCCCcceeEEECCC-CCEEE
Confidence 347889988888778999999976 221 110 11123467889999998 55666
Q ss_pred EEEcCCeEEEEECCCCceee-eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcccee-eecCCeeeEEEc
Q 018293 140 SASADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWD 217 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~ 217 (358)
+...++.|..||.. ++... .+......+.++++.+++ .++++...++.|..+|.. ++...... .....+..++++
T Consensus 78 ~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 78 TENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG 154 (300)
T ss_dssp EETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC
T ss_pred EecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEEC
Confidence 66667889999987 55432 222234668899999988 777776668889999986 43322111 123568899999
Q ss_pred CCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCcee
Q 018293 218 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC 297 (358)
Q Consensus 218 ~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 297 (358)
+++ +++++...++.|..||. .+. ........+...+.++++.+++ ++.++....+.|.+||. +++. .
T Consensus 155 ~~g-~l~v~~~~~~~i~~~~~-~g~--------~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~-~ 221 (300)
T 2qc5_A 155 SDN-ALWFTENQNNSIGRITN-TGK--------LEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITT-TGEI-S 221 (300)
T ss_dssp TTS-SEEEEETTTTEEEEECT-TCC--------EEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCE-E
T ss_pred CCC-CEEEEecCCCeEEEECC-CCc--------EEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcC-CCcE-E
Confidence 955 46666656788999998 331 1112222334568899999987 77776666778999998 4442 2
Q ss_pred eEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEc
Q 018293 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335 (358)
Q Consensus 298 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~ 335 (358)
..........+.+++++++|+ ++++...++.|..|+.
T Consensus 222 ~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 222 EYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITN 258 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECT
T ss_pred EEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECC
Confidence 222333456688999999998 6776666789999998
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.57 E-value=7.5e-13 Score=121.83 Aligned_cols=237 Identities=16% Similarity=0.117 Sum_probs=149.9
Q ss_pred ccccCCCceEE-----ecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCccc--EEEEecC
Q 018293 59 LKDREKGNFMA-----VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS--VLGLAWN 131 (358)
Q Consensus 59 ~~~s~~~~~l~-----~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~ 131 (358)
+.|||||++|| .|+....|++||+.+++.... +... ...++|+
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~------------------------------~~~~~k~~~~~Ws 183 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET------------------------------PLKDVKFSGISWL 183 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE------------------------------EEEEEESCCCEEE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc------------------------------ccCCceeccEEEe
Confidence 45699999998 354557899999987653221 1112 3577899
Q ss_pred CCCCcEEEEEEcCC-------------eEEEEECCCCce----eeeecc-cccceeeEEEcCCCCcEEEEEeC---CCcE
Q 018293 132 KEFRNILASASADK-------------QVKIWDVAAGKC----NLTLEH-HTDKVQAVAWNHHSPQILLSGSF---DRSV 190 (358)
Q Consensus 132 ~~~~~~l~s~~~dg-------------~v~iwd~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~---dg~i 190 (358)
| ++.|+.++.+. .|.+|++.+... +..... +.....++.|+|++..++++... +..|
T Consensus 184 -D-g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 261 (693)
T 3iuj_A 184 -G-NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRL 261 (693)
T ss_dssp -T-TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEE
T ss_pred -C-CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEE
Confidence 8 55677777664 399999987642 333333 44457789999999444454443 2589
Q ss_pred EEEEcccCCC-ccceeeecCCeeeEEEcCCCCCeEEEEecC---CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEE
Q 018293 191 VMKDARISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLED---GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 266 (358)
Q Consensus 191 ~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 266 (358)
.++|+.++.. .............. |+++++.+++.+..+ +.|..+|+.+... .....+..|...+.
T Consensus 262 ~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~-------~~~~~l~~~~~~~~-- 331 (693)
T 3iuj_A 262 YVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP-------AHWRDLIPERQQVL-- 331 (693)
T ss_dssp EEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG-------GGCEEEECCCSSCE--
T ss_pred EEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc-------cccEEEecCCCCEE--
Confidence 9999987642 22233333334343 566566666666554 6799999887521 22345566665554
Q ss_pred EecCCCCcEEEEEeCCC--cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccC---CeEEEEEccCCC
Q 018293 267 SYNPLVPNLLATGSTDK--MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEIWDTLSDA 339 (358)
Q Consensus 267 ~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~vw~~~~~~ 339 (358)
.|++++..++++...++ .|++||+..+.. ....+ ...+.+..+.+++++..++++.+.. +.+..||+.+++
T Consensus 332 ~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVDATARVEQFDYEGKRV-REVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTTSCEE-EEECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEECCEEEEEEEECCeeEEEEEECCCCee-EEeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 88888844555555555 588899875542 12122 2345677888888888655544332 789999997765
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.56 E-value=2.3e-12 Score=119.70 Aligned_cols=243 Identities=11% Similarity=0.062 Sum_probs=151.1
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeec-CCccccCCCceEEecCCCCe----
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLD-CPLKDREKGNFMAVGSMEPA---- 76 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~l~~g~~dg~---- 76 (358)
.+||+|+.|+.+...+......+++++...+. ..... . .+.. ..+.|+|| +.|+.++.++.
T Consensus 169 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~---~~~~~---~-------~~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDGGSDWRTVKFVGVADGK---PLADE---L-------KWVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp EECTTSSEEEEEEEETTCSEEEEEEEETTTCC---EEEEE---E-------EEEESCCCEESTT-SEEEEEECCCC----
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCC---CCCcc---C-------CCceeccEEEECC-CEEEEEEecCccccc
Confidence 68999999999977653334689999988762 22111 0 1111 14455999 88888776554
Q ss_pred ----------EEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCC-
Q 018293 77 ----------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK- 145 (358)
Q Consensus 77 ----------i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg- 145 (358)
|++|++.+...... .+.....+...+..+.|+|+ +++|+..+.++
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~-----------------------lv~~~~~~~~~~~~~~~SpD-G~~l~~~~~~~~ 290 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQ-----------------------PVFATPELPKRGHGASVSSD-GRWVVITSSEGT 290 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCE-----------------------EEECCTTCTTCEEEEEECTT-SCEEEEEEECTT
T ss_pred ccccCCCCCEEEEEECCCCchhCE-----------------------EEeccCCCCeEEEEEEECCC-CCEEEEEEEccC
Confidence 88888865332111 11122234446889999999 45666665543
Q ss_pred ----eEEEEECCCC--ceeeeecccccceeeEEEcCCCCcEEEEEeC----CCcEEEEEcccCC-C-ccceeeecCCeee
Q 018293 146 ----QVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSPQILLSGSF----DRSVVMKDARIST-H-SGFKWAVAADVES 213 (358)
Q Consensus 146 ----~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~-~-~~~~~~~~~~i~~ 213 (358)
.|.+||+.++ ++...+..+...+.... +|++ ..|+..+. ++.|.+||+.+.. . ..........+..
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVG-DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES 368 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEET-TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE
T ss_pred CCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccC-CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE
Confidence 8999999877 31444544444455443 4788 55555554 3459999987742 1 2212223334666
Q ss_pred EEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee-cCCceeEEEecCCCCcEEEEEeC---CCcEEEEe
Q 018293 214 LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGST---DKMVKLWD 289 (358)
Q Consensus 214 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~---dg~i~i~d 289 (358)
+.|. ++.++++...|+..++|.+... ......+.. +...+..+.++|++..++++.+. .+.|++||
T Consensus 369 ~~~~--~~~lv~~~~~dg~~~l~~~~~~--------g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 438 (741)
T 1yr2_A 369 VGIA--GNRLFASYIHDAKSQVLAFDLD--------GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALD 438 (741)
T ss_dssp EEEE--BTEEEEEEEETTEEEEEEEETT--------SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEE
T ss_pred EEEE--CCEEEEEEEECCEEEEEEEeCC--------CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 7776 4557888889998888776522 133344443 35678899999988555555443 46799999
Q ss_pred cCCCC
Q 018293 290 LSNNQ 294 (358)
Q Consensus 290 ~~~~~ 294 (358)
+.+++
T Consensus 439 ~~tg~ 443 (741)
T 1yr2_A 439 PATAK 443 (741)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 98876
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.56 E-value=4.9e-12 Score=105.50 Aligned_cols=226 Identities=12% Similarity=0.045 Sum_probs=141.4
Q ss_pred ccccCC-CceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcE
Q 018293 59 LKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 137 (358)
Q Consensus 59 ~~~s~~-~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 137 (358)
+.|+|+ +.++++...++.|..||..++.... + .....+.+++|+++ +.+
T Consensus 54 p~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~----------------------------~-~~~~~v~~i~~~~d-g~l 103 (326)
T 2ghs_A 54 PTFDPASGTAWWFNILERELHELHLASGRKTV----------------------------H-ALPFMGSALAKISD-SKQ 103 (326)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEETTTTEEEE----------------------------E-ECSSCEEEEEEEET-TEE
T ss_pred CeEeCCCCEEEEEECCCCEEEEEECCCCcEEE----------------------------E-ECCCcceEEEEeCC-CeE
Confidence 445786 5566777778999999986432110 0 12356899999999 555
Q ss_pred EEEEEcCCeEEEEECCCCceeeeecc----cccceeeEEEcCCCCcEEEEEeC------CCcEEEEEcccCCCccceeee
Q 018293 138 LASASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWNHHSPQILLSGSF------DRSVVMKDARISTHSGFKWAV 207 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~ 207 (358)
+++ +. ..|.+||..+++....... ....+..++++|+| +++++... .+.|..++ +++. ......
T Consensus 104 ~v~-~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~ 177 (326)
T 2ghs_A 104 LIA-SD-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFAD 177 (326)
T ss_dssp EEE-ET-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEE
T ss_pred EEE-EC-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCC
Confidence 554 44 4599999988765332221 12468899999999 65555432 24555555 3322 212233
Q ss_pred cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcc--cC-CCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCc
Q 018293 208 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIR--TA-KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 284 (358)
Q Consensus 208 ~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~--~~-~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 284 (358)
......++|+|++..++++.+.++.|.+||+. ++ .... ......+.........+++.++| ++.++...++.
T Consensus 178 ~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~----~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~ 252 (326)
T 2ghs_A 178 ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK----AEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGA 252 (326)
T ss_dssp ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC----CEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTE
T ss_pred CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC----ceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCE
Confidence 34577899999765455666667899999986 33 2100 01111222234556789999988 67666666788
Q ss_pred EEEEecCCCCceeeEecCCCCceeEEEEEc-CCCCeEEEEEccCC
Q 018293 285 VKLWDLSNNQPSCIASRNPKAGAVFSVAFS-EDSPFVLAIGGSKG 328 (358)
Q Consensus 285 i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg 328 (358)
|.+||. +++. +..+..+...+.+++|+ +++..++++...++
T Consensus 253 v~~~d~-~g~~--~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 253 VDRYDT-DGNH--IARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEECT-TCCE--EEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred EEEECC-CCCE--EEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 999998 4542 33344445579999998 88886666655553
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.56 E-value=2.7e-13 Score=113.89 Aligned_cols=176 Identities=13% Similarity=0.132 Sum_probs=126.7
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
++++...++++|+.++ +.+|++...+..... .. ...... ....+.. |+.++| + +.+|+
T Consensus 44 ais~~~gll~a~~~~~-l~v~~~~~l~~~~~~---------------~~-~~~~~~-~~~~lp~-V~~l~f--d-~~~L~ 101 (388)
T 1xip_A 44 DISNSKSLFVAASGSK-AVVGELQLLRDHITS---------------DS-TPLTFK-WEKEIPD-VIFVCF--H-GDQVL 101 (388)
T ss_dssp EEETTTTEEEEEETTE-EEEEEHHHHHHHHHS---------------SS-CCCCCS-EEEECTT-EEEEEE--E-TTEEE
T ss_pred EEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcc---------------cc-ccccce-EEeeCCC-eeEEEE--C-CCEEE
Confidence 3488999999999875 556998754311000 00 000010 1123556 999999 6 66888
Q ss_pred EEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCC
Q 018293 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPH 219 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 219 (358)
++ .++.|++||+.+.........+..++.++.+.+. .+++++.||.+.+||+..+... .+...|++++|+|.
T Consensus 102 v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~----~~~~~Vs~v~WSpk 173 (388)
T 1xip_A 102 VS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTK----QLAQNVTSFDVTNS 173 (388)
T ss_dssp EE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEE----EEEESEEEEEECSS
T ss_pred EE-cCCcEEEEEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCccc----cccCCceEEEEcCC
Confidence 88 8899999999877666666677788888887764 2888899999999999876643 25568999999996
Q ss_pred CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCc--cEEE------e---ecCCceeEEEecCCCCcEEEE
Q 018293 220 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS--SFTL------H---AHDKAVCTISYNPLVPNLLAT 278 (358)
Q Consensus 220 ~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~------~---~~~~~i~~i~~~~~~~~~l~~ 278 (358)
+ ++.|..||.+++|+.... .. ...+ . +|...|.++.|.+++ .++++
T Consensus 174 G---~~vg~~dg~i~~~~~~~~---------~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~-~flv~ 230 (388)
T 1xip_A 174 Q---LAVLLKDRSFQSFAWRNG---------EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAV 230 (388)
T ss_dssp E---EEEEETTSCEEEEEEETT---------EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS-EEEEE
T ss_pred c---eEEEEcCCcEEEEcCCCc---------cccccceecCCcccccccCCCeeEEEEEEecCC-eEEEE
Confidence 5 678999999999988765 21 2233 2 367889999999987 67766
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.52 E-value=6.7e-12 Score=104.10 Aligned_cols=241 Identities=10% Similarity=0.122 Sum_probs=144.6
Q ss_pred cccCCCcEEEE-------EEecCCCceEEEEEEeccCCCCCceEeece-eecCCcccceeeecCCccccCC-CceEEecC
Q 018293 2 TINPNDAVIVC-------ARNEDDVSHLEVYILEESDGGDPNLYVHHH-IIIPAFPLCMAWLDCPLKDREK-GNFMAVGS 72 (358)
Q Consensus 2 ~~~p~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~ 72 (358)
.+.|+++++++ +...+ .++.|+...+... .+.... ......+..+ .++++ |+++++..
T Consensus 24 ~~~~~g~l~~~~~~~~~~~~~~~-----~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i-------~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 24 VFDKNGDFYIVAPEVEVNGKPAG-----EILRIDLKTGKKT-VICKPEVNGYGGIPAGC-------QCDRDANQLFVADM 90 (314)
T ss_dssp EECTTSCEEEEETTCEETTEECC-----EEEEECTTTCCEE-EEECCEETTEECCEEEE-------EECSSSSEEEEEET
T ss_pred eECCCCCEEEEEeccccCCCCCC-----EEEEEeCCCCcEE-EEEecccCCCCCCCceE-------EEecCCCcEEEEEC
Confidence 56788988887 44444 7888886554211 111100 0011222333 44788 77666554
Q ss_pred CCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcC--------
Q 018293 73 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD-------- 144 (358)
Q Consensus 73 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-------- 144 (358)
.+.|.+||.+ ++.... . .. .........+.++++.++ ++++++...+
T Consensus 91 -~~~l~~~d~~-g~~~~~-~-~~--------------------~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~ 145 (314)
T 1pjx_A 91 -RLGLLVVQTD-GTFEEI-A-KK--------------------DSEGRRMQGCNDCAFDYE-GNLWITAPAGEVAPADYT 145 (314)
T ss_dssp -TTEEEEEETT-SCEEEC-C-SB--------------------CTTSCBCBCCCEEEECTT-SCEEEEECBCBCTTSCCC
T ss_pred -CCCEEEEeCC-CCEEEE-E-ec--------------------cCCCccccCCcCEEECCC-CCEEEEecCccccccccc
Confidence 3478889876 322110 0 00 000012345889999999 5566666554
Q ss_pred -------CeEEEEECCCCceeeeecccccceeeEEEc----CCCCcEEEEEeCCCcEEEEEccc-CCCcc--ceee---e
Q 018293 145 -------KQVKIWDVAAGKCNLTLEHHTDKVQAVAWN----HHSPQILLSGSFDRSVVMKDARI-STHSG--FKWA---V 207 (358)
Q Consensus 145 -------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~~~dg~i~i~d~~~-~~~~~--~~~~---~ 207 (358)
+.|..||.. ++..... .+......++|+ +++..++++...++.|.+||... ++... .... .
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 146 RSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp BTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred ccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC
Confidence 567777765 5443322 233456889999 98833444445688999999862 22110 1111 1
Q ss_pred c-CCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCc-EEEEEeCCCcE
Q 018293 208 A-ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN-LLATGSTDKMV 285 (358)
Q Consensus 208 ~-~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i 285 (358)
. ..+..+++++++ +++++...++.|.+||..++ .....+..+...+.+++++|++ + ++++...++.|
T Consensus 224 ~~~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g---------~~~~~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~~l 292 (314)
T 1pjx_A 224 HEGGADGMDFDEDN-NLLVANWGSSHIEVFGPDGG---------QPKMRIRCPFEKPSNLHFKPQT-KTIFVTEHENNAV 292 (314)
T ss_dssp SSCEEEEEEEBTTC-CEEEEEETTTEEEEECTTCB---------SCSEEEECSSSCEEEEEECTTS-SEEEEEETTTTEE
T ss_pred CCCCCCceEECCCC-CEEEEEcCCCEEEEEcCCCC---------cEeEEEeCCCCCceeEEECCCC-CEEEEEeCCCCeE
Confidence 1 457789999954 57777667889999998755 4445555566778999999998 6 55555567889
Q ss_pred EEEecCCC
Q 018293 286 KLWDLSNN 293 (358)
Q Consensus 286 ~i~d~~~~ 293 (358)
..|++...
T Consensus 293 ~~~~~~~~ 300 (314)
T 1pjx_A 293 WKFEWQRN 300 (314)
T ss_dssp EEEECSSC
T ss_pred EEEeCCCC
Confidence 99998653
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.50 E-value=8.8e-12 Score=114.74 Aligned_cols=244 Identities=11% Similarity=0.056 Sum_probs=151.9
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeee-cCCccccCCCceEEecCCCC-----
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWL-DCPLKDREKGNFMAVGSMEP----- 75 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~l~~g~~dg----- 75 (358)
.+||+|+.|+.+...+......+++++...+. ....+ +.+. ..+++|+ ||+.|+.++.+.
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~---~~~~~----------~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQ---PLETP----------LKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCS---EEEEE----------EEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCC---CCccc----------cCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 68999999998876553334789999988762 22111 1111 1245569 999898887764
Q ss_pred --------eEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCC-CcccEEEEecCCCCCcEEEEEEcC--
Q 018293 76 --------AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS-HTDSVLGLAWNKEFRNILASASAD-- 144 (358)
Q Consensus 76 --------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d-- 144 (358)
.|++|++.+..... ..+..... |...+..+.|+|++..++++.+.+
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~-----------------------~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 257 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDD-----------------------RLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTS 257 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGC-----------------------EEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSS
T ss_pred ccccCCCcEEEEEECCCCcccc-----------------------eEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCC
Confidence 38889886543211 11112223 445578899999965444554432
Q ss_pred -CeEEEEECCCCc-eeeeecccccceeeEEEcCCCCcEEEEEeCC---CcEEEEEcccCCCc--cceeeecCCeeeEEEc
Q 018293 145 -KQVKIWDVAAGK-CNLTLEHHTDKVQAVAWNHHSPQILLSGSFD---RSVVMKDARISTHS--GFKWAVAADVESLAWD 217 (358)
Q Consensus 145 -g~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~--~~~~~~~~~i~~~~~~ 217 (358)
+.|.++|+.++. ....+..+....... |++++..+++.+..+ +.|..+|+.++... .....+...+. .|+
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s 334 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVH 334 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEE
T ss_pred CcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEE
Confidence 589999998763 344555555555544 667774666666554 57899999876541 22334444443 788
Q ss_pred CCCCCeEEEEecCC--eEEEEEcccCCCCCCCCCCCccEEEe-ecCCceeEEEecCCCCcEEEEEeCC---CcEEEEecC
Q 018293 218 PHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCTISYNPLVPNLLATGSTD---KMVKLWDLS 291 (358)
Q Consensus 218 ~~~~~~~~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d---g~i~i~d~~ 291 (358)
+++..++++...++ .|++||+... ....+. .....+..+.++|++..++++.+.. +.+..||+.
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~----------~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGK----------RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSC----------EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EECCEEEEEEEECCeeEEEEEECCCC----------eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 87665555556666 6888887643 223332 2345677888888885555554432 789999998
Q ss_pred CCCc
Q 018293 292 NNQP 295 (358)
Q Consensus 292 ~~~~ 295 (358)
+++.
T Consensus 405 ~g~~ 408 (693)
T 3iuj_A 405 SGAI 408 (693)
T ss_dssp TCCE
T ss_pred CCeE
Confidence 8764
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.48 E-value=1.1e-10 Score=98.77 Aligned_cols=245 Identities=9% Similarity=-0.023 Sum_probs=146.9
Q ss_pred CcccCCCcEEEEEEecCC-----CceEEEEEEeccCCCCCceEeeceeecC--CcccceeeecCCccccCCCceEEecCC
Q 018293 1 MTINPNDAVIVCARNEDD-----VSHLEVYILEESDGGDPNLYVHHHIIIP--AFPLCMAWLDCPLKDREKGNFMAVGSM 73 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~g~~ 73 (358)
+.++|+|+.+.++....+ ...-.+.+|+.... ... ....++ ...... -.|..+.++|||++|+++..
T Consensus 71 i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~---~~~--~~i~~~~~~~~~~g-~~p~~~~~spDG~~l~v~n~ 144 (373)
T 2mad_H 71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF---LPI--ADIELPDAPRFDVG-PYSWMNANTPNNADLLFFQF 144 (373)
T ss_pred eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC---cEE--EEEECCCccccccC-CCccceEECCCCCEEEEEec
Confidence 578999999999963100 00126778887643 111 111111 000000 01224455999999998874
Q ss_pred --CCeEEEEEcccccCcCc-eeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEE
Q 018293 74 --EPAIEIWDLDVIDEVQP-HVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 150 (358)
Q Consensus 74 --dg~i~vw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 150 (358)
++.|.++| .+++.... .. ... ++.+.|++...+++.+.||.+.++
T Consensus 145 ~~~~~v~viD-~t~~~~~~~i~----------------------------~~~---~~~~~~~~~~~~~~~~~dg~~~~v 192 (373)
T 2mad_H 145 AAGPAVGLVV-QGGSSDDQLLS----------------------------SPT---CYHIHPGAPSTFYLLCAQGGLAKT 192 (373)
T ss_pred CCCCeEEEEE-CCCCEEeEEcC----------------------------CCc---eEEEEeCCCceEEEEcCCCCEEEE
Confidence 57899999 86544321 10 111 244556656677888899999999
Q ss_pred ECCCCceeeeec-----ccccce-eeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc-ceee-----------ecCCee
Q 018293 151 DVAAGKCNLTLE-----HHTDKV-QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWA-----------VAADVE 212 (358)
Q Consensus 151 d~~~~~~~~~~~-----~~~~~v-~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~-----------~~~~i~ 212 (358)
|. +++...... ....++ ....+.+++..++++ +..+.+.+.|+....... .... ......
T Consensus 193 d~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 270 (373)
T 2mad_H 193 DH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQ 270 (373)
T ss_pred EC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceE
Confidence 99 877653321 111221 234566666344444 467899999986543211 0111 122244
Q ss_pred eEEEcCCCCCeEEEEe---------cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe-CC
Q 018293 213 SLAWDPHAEHSFVVSL---------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TD 282 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~---------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~d 282 (358)
.+.++|++..++++.. .++.|.++|..+. +.+..+.. .....+++|+|++..+++++. .+
T Consensus 271 ~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~---------~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG---------QTSSQISL-GHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred eEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC---------EEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCC
Confidence 4788997664444432 1357999999886 55566643 335789999999943777776 58
Q ss_pred CcEEEEecCCCCc
Q 018293 283 KMVKLWDLSNNQP 295 (358)
Q Consensus 283 g~i~i~d~~~~~~ 295 (358)
+.|.++|..+++.
T Consensus 341 ~~V~ViD~~t~~v 353 (373)
T 2mad_H 341 EVLHIYDAGAGDQ 353 (373)
T ss_pred CeEEEEECCCCCE
Confidence 9999999999884
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.48 E-value=3.6e-11 Score=100.72 Aligned_cols=265 Identities=10% Similarity=0.027 Sum_probs=155.7
Q ss_pred CcccCCCcEEEEEEecCC-----CceEEEEEEeccCCCCCceEeeceeecCC-cccceeeecCCccccCCCceEEecCC-
Q 018293 1 MTINPNDAVIVCARNEDD-----VSHLEVYILEESDGGDPNLYVHHHIIIPA-FPLCMAWLDCPLKDREKGNFMAVGSM- 73 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~g~~- 73 (358)
+.++|+|+.+.++..-.. ...-.+.+||.... ... .+..++. ......-.|..+.|+|||++|+++..
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~---~v~--~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~ 157 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL---LPT--ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS 157 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---CEE--EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---eEE--EEEECCCccccccCCCCceEEEcCCCCEEEEEEcC
Confidence 468999999988853100 01226888998764 221 1111211 00000001224456999999988764
Q ss_pred -CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEEC
Q 018293 74 -EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 152 (358)
Q Consensus 74 -dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 152 (358)
++.|.++|+.+.+....+.+. + |....|.+...+++.+.||.+.+.++
T Consensus 158 ~~~~VsVID~~t~~vv~tI~v~-------------------------g------~~~~~P~g~~~~~~~~~DG~~~~v~~ 206 (386)
T 3sjl_D 158 PAPAVGVVDLEGKAFKRMLDVP-------------------------D------CYHIFPTAPDTFFMHCRDGSLAKVAF 206 (386)
T ss_dssp SSCEEEEEETTTTEEEEEEECC-------------------------S------EEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEECC-------------------------C------cceeecCCCceeEEECCCCCEEEEEC
Confidence 689999999876544432210 1 11123444567778888999999998
Q ss_pred CC-Cceeeeeccc----cccee-eEEEc-CCCCcEEEEEeCCCcEEEEEcccCCCc--ccee----------eecCCeee
Q 018293 153 AA-GKCNLTLEHH----TDKVQ-AVAWN-HHSPQILLSGSFDRSVVMKDARISTHS--GFKW----------AVAADVES 213 (358)
Q Consensus 153 ~~-~~~~~~~~~~----~~~v~-~~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~----------~~~~~i~~ 213 (358)
.+ ++.......+ ..++. ...|. ++| +++ ..+.+|.+.+.|+...... .... -.......
T Consensus 207 ~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~-~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~ 284 (386)
T 3sjl_D 207 GTEGTPEITHTEVFHPEDEFLINHPAYSQKAG-RLV-WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQ 284 (386)
T ss_dssp CSSSCCEEEECCCCSCTTSCBCSCCEEETTTT-EEE-EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSC
T ss_pred CCCCeEEEeecceeccccccccccceeEcCCC-cEE-EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcce
Confidence 76 5542211111 12222 23554 555 444 4666899999999765421 1110 01234556
Q ss_pred EEEcCCCCCeEEEEec---------CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEE-eCCC
Q 018293 214 LAWDPHAEHSFVVSLE---------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG-STDK 283 (358)
Q Consensus 214 ~~~~~~~~~~~~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~-~~dg 283 (358)
++++++++.++++-.. .+.|.++|+.+. +.+..+... ..+.++++++++..+|++. ..++
T Consensus 285 ~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~---------kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~ 354 (386)
T 3sjl_D 285 VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG---------ERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDK 354 (386)
T ss_dssp EEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC---------CEEEEEEEE-EEECEEEECSSSSCEEEEEETTTT
T ss_pred eeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC---------eEEEEEECC-CCcceEEECCCCCeEEEEEcCCCC
Confidence 8888866644444321 257999999987 556665543 3678999999984466664 4589
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEEEcCC
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 316 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 316 (358)
.|.++|..+++........+|.. .|.+++|
T Consensus 355 ~VsViD~~t~k~~~~i~~~~~p~---~l~~s~d 384 (386)
T 3sjl_D 355 TLYIHDAESGEELRSVNQLGHGP---QVITTAD 384 (386)
T ss_dssp EEEEEETTTCCEEEEECCCCSSC---CEEEECC
T ss_pred eEEEEECCCCcEEEEecCCCCCc---eeEECCc
Confidence 99999999998544444444433 3455554
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.47 E-value=5.8e-11 Score=97.67 Aligned_cols=208 Identities=9% Similarity=0.058 Sum_probs=137.4
Q ss_pred CcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC
Q 018293 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 200 (358)
Q Consensus 121 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 200 (358)
+..-..+..|+++++.++++...++.|..||..+++. ..+. ....+.++++++++ ++++ +. ++.|.+||..+++.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG-~l~v-~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSG-GYVA-TI-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTS-SEEE-EE-TTEEEEEETTTTEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCC-CEEE-EE-CCeEEEEECCCCcE
Confidence 3345668889997677788888889999999987764 3333 45678999999999 6444 44 56799999876654
Q ss_pred ccceee----ecCCeeeEEEcCCCCCeEEEEecC---------CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEE
Q 018293 201 SGFKWA----VAADVESLAWDPHAEHSFVVSLED---------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTIS 267 (358)
Q Consensus 201 ~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 267 (358)
...... ....+..++++|++. ++++.... ..-.+|.+... .....+..+....+.++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~---------g~~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD---------HHVKKYFDQVDISNGLD 155 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT---------SCEEEEEEEESBEEEEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC---------CCEEEEeeccccccceE
Confidence 321111 123478899999654 55543221 23345555432 11222333344568999
Q ss_pred ecCCCCcEEEEEeCCCcEEEEec--CCCCce---eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 268 YNPLVPNLLATGSTDKMVKLWDL--SNNQPS---CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 268 ~~~~~~~~l~~~~~dg~i~i~d~--~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
|+|++..++++.+.++.|.+|++ .++... ....+..+......++++++|. ++++...++.|..||..+++.+.
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEEE
Confidence 99998445566677889999997 344321 1223333445688999999998 67777777889999998887665
Q ss_pred cc
Q 018293 343 NR 344 (358)
Q Consensus 343 ~~ 344 (358)
..
T Consensus 235 ~i 236 (297)
T 3g4e_A 235 TV 236 (297)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.45 E-value=2.7e-11 Score=104.07 Aligned_cols=200 Identities=13% Similarity=0.068 Sum_probs=137.2
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCC--cEEEEEcccCCC
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR--SVVMKDARISTH 200 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~ 200 (358)
.....|+|+++ ++++++...++.|++||.++++....... ..... ++|++++ ..++++..++ .|.+++......
T Consensus 131 ~~P~~la~d~~-g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGN-NTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECST-TEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTS-SEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCC-CCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCC-CcEEEEecCCCceEEEEEcCCCce
Confidence 46889999998 56777777779999999988776554443 23334 9999999 7777777765 788888776544
Q ss_pred ccce----eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-----eecCCc--eeEEEec
Q 018293 201 SGFK----WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-----HAHDKA--VCTISYN 269 (358)
Q Consensus 201 ~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-----~~~~~~--i~~i~~~ 269 (358)
.... ......+.+++++|+++ .++++..++.|+.||.... . ...+ .++... ...++|+
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~---------~-~~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQ---------E-VTLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTC---------C-EEEEEECCCCSCCCCSSCCEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCC---------C-EEEEecccccCCCCCCccccEEEe
Confidence 2222 11345678999999555 4555777889999998765 2 1111 111111 1399999
Q ss_pred CCCCcEEEEEeCCCcEEEEecCCCCceeeEecC---C---------CCceeEEEEEcCCCCeEEEEEc-cCCeEEEEEcc
Q 018293 270 PLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN---P---------KAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTL 336 (358)
Q Consensus 270 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~---------~~~~v~~~~~~~~~~~~l~~~~-~dg~i~vw~~~ 336 (358)
|+++.++++-..++.|+.|+..... ..+.... + .-.....++++++|+ ++++-. .++.|+.|++.
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~ 353 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDIL 353 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETT
T ss_pred CCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECC
Confidence 9654777777778899999976542 1111111 0 013478899999999 788887 88999999987
Q ss_pred CCC
Q 018293 337 SDA 339 (358)
Q Consensus 337 ~~~ 339 (358)
+++
T Consensus 354 ~G~ 356 (409)
T 3hrp_A 354 DGY 356 (409)
T ss_dssp TTE
T ss_pred CCE
Confidence 765
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=1.5e-11 Score=103.32 Aligned_cols=247 Identities=11% Similarity=0.064 Sum_probs=148.2
Q ss_pred CccccCCCceEEecC--CCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCC
Q 018293 58 PLKDREKGNFMAVGS--MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 135 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~--~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 135 (358)
.++++++|+++++.. .++.++||.++++. +.+. ... .....+|-..+..++++++ +
T Consensus 21 ~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~---p~~-----------------~~~~~~~~~~p~gv~~d~~-g 78 (343)
T 2qe8_A 21 NITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPF---PPQ-----------------SGNAIITFDTVLGIKSDGN-G 78 (343)
T ss_dssp EEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEES---CCC-----------------CSSCCCCCSCEEEEEECSS-S
T ss_pred eEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecC---CCc-----------------ccCcccceeEeeEEEEcCC-C
Confidence 345589999998853 23446677765221 1110 000 0012246678999999999 5
Q ss_pred cEEEEEEc-----CCeEEEEECCCCceeeeeccc------ccceeeEEEcCCCCcEEEEEe---CCCcEEEEEcccCCCc
Q 018293 136 NILASASA-----DKQVKIWDVAAGKCNLTLEHH------TDKVQAVAWNHHSPQILLSGS---FDRSVVMKDARISTHS 201 (358)
Q Consensus 136 ~~l~s~~~-----dg~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~ 201 (358)
+++++-.. ++.|.+||+.+++.+..+... ...+..+++++++...+++.. .++.|.+||+.+++..
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~ 158 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA 158 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE
Confidence 55555433 578999999999876665421 235688999986535555555 6789999998765432
Q ss_pred cceee-----------------------------ecCCeeeEEEcCCCCCeEEEEecCC-eEEEEEcccCCCCCCCCCCC
Q 018293 202 GFKWA-----------------------------VAADVESLAWDPHAEHSFVVSLEDG-TIKGFDIRTAKSDPDSTSQQ 251 (358)
Q Consensus 202 ~~~~~-----------------------------~~~~i~~~~~~~~~~~~~~~~~~dg-~i~i~d~~~~~~~~~~~~~~ 251 (358)
..... ....+..++|+|++. .++.+..++ .+..++........ .....
T Consensus 159 r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~-~~~~~ 236 (343)
T 2qe8_A 159 RVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQ-LTDAE 236 (343)
T ss_dssp EECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSC-EEEEEESSCSEEEEEEHHHHTCTT-CCHHH
T ss_pred EEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCC-CChhh
Confidence 21100 012357899999654 566655544 56555543211000 00000
Q ss_pred --ccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCe
Q 018293 252 --SSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGK 329 (358)
Q Consensus 252 --~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 329 (358)
......++......++++++| +++++...++.|.+||..+++...+.. ..+.....+++|.+++. ++++.+..+.
T Consensus 237 ~~~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~~~~~~-~~~~~~p~~va~~~~g~-l~v~~~~~~~ 313 (343)
T 2qe8_A 237 LGSKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSADRAYKLLVT-DEKLSWTDSFNFGSDGY-LYFDCNQLHH 313 (343)
T ss_dssp HHTTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEEEEEEE-CGGGSCEEEEEECTTSC-EEEEECCGGG
T ss_pred hhcceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECCCCCEEEEEE-CCceecCCeeEECCCCc-EEEEeCcccc
Confidence 001222344456789999998 888888889999999985555322222 12245688999999988 6777665444
Q ss_pred EE
Q 018293 330 LE 331 (358)
Q Consensus 330 i~ 331 (358)
+.
T Consensus 314 ~~ 315 (343)
T 2qe8_A 314 SA 315 (343)
T ss_dssp SG
T ss_pred cc
Confidence 43
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.39 E-value=1.9e-11 Score=102.44 Aligned_cols=239 Identities=10% Similarity=-0.053 Sum_probs=138.0
Q ss_pred eEEecCCCC----eEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE
Q 018293 67 FMAVGSMEP----AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 142 (358)
Q Consensus 67 ~l~~g~~dg----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 142 (358)
.+++-..++ .|.++|..+.+.+..... +. .+ .+.++|++..+.++.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~v--------------------------G~-~P--~i~~spDg~~lyVan~ 84 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLG--------------------------AF-LS--LAVAGHSGSDFALAST 84 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEE--------------------------CT-TC--EEEECTTSSCEEEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeC--------------------------CC-CC--ceEECCCCCEEEEEcc
Confidence 444444444 888999987665543322 22 34 7999999654444432
Q ss_pred ---------cCCeEEEEECCCCceeeeeccc-------ccceeeEEEcCCCCcEEEEEeC--CCcEEE--EEcccCCCcc
Q 018293 143 ---------ADKQVKIWDVAAGKCNLTLEHH-------TDKVQAVAWNHHSPQILLSGSF--DRSVVM--KDARISTHSG 202 (358)
Q Consensus 143 ---------~dg~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~--dg~i~i--~d~~~~~~~~ 202 (358)
.++.|.+||+.+++.+.++... ......+.++|+| ++++++.. +..+.+ +|+.+ ..
T Consensus 85 ~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDG-k~lyVan~~~~~~v~V~~iD~~t---v~ 160 (368)
T 1mda_H 85 SFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS-ACLLFFLFGSSAAAGLSVPGASD---DQ 160 (368)
T ss_dssp EETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS-SCEEEEECSSSCEEEEEETTTEE---EE
T ss_pred cccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCC-CEEEEEccCCCCeEEEEEEchhh---ce
Confidence 4789999999999999888643 1346789999999 66666654 456888 88876 11
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEccc-----CCCCCC----CC---------CC--------CccEEE
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT-----AKSDPD----ST---------SQ--------QSSFTL 256 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~-----~~~~~~----~~---------~~--------~~~~~~ 256 (358)
....... ..+.|++...+++.+.||.+.+.|+.. ++.... .. .. ..+..+
T Consensus 161 -~i~v~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~vi 236 (368)
T 1mda_H 161 -LTKSASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQG 236 (368)
T ss_dssp -EEECSSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEE
T ss_pred -EEECCCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEE
Confidence 1111000 111222333333333444444444433 110000 00 00 000000
Q ss_pred ee--------------------c---CCceeEEEecCCCCcEEEEEe---C-----CCcEEEEecCCCCceeeEecCCCC
Q 018293 257 HA--------------------H---DKAVCTISYNPLVPNLLATGS---T-----DKMVKLWDLSNNQPSCIASRNPKA 305 (358)
Q Consensus 257 ~~--------------------~---~~~i~~i~~~~~~~~~l~~~~---~-----dg~i~i~d~~~~~~~~~~~~~~~~ 305 (358)
.. + ......++++|++.+++++.. . ++.+.++|+.+.+. +..+.. .
T Consensus 237 D~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v--v~~i~v-g 313 (368)
T 1mda_H 237 DIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT--SGPISN-G 313 (368)
T ss_dssp ECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE--EECCEE-E
T ss_pred ECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE--EEEEEC-C
Confidence 00 0 011122679999844444433 2 23566999999874 333332 2
Q ss_pred ceeEEEEEcCCCCeEEEEEc-cCCeEEEEEccCCCcccccc
Q 018293 306 GAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 306 ~~v~~~~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~ 345 (358)
.....++|+|||++++++.. .++.|.++|+.+++.+.+.-
T Consensus 314 ~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 35788999999987788777 69999999999999876654
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.39 E-value=1.3e-10 Score=95.97 Aligned_cols=225 Identities=14% Similarity=0.093 Sum_probs=137.5
Q ss_pred ccccCCCc-eEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcE
Q 018293 59 LKDREKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 137 (358)
Q Consensus 59 ~~~s~~~~-~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 137 (358)
+.|+++|+ +++++..++.|..|+.. ++ .. .+..+...+..++++++ +++
T Consensus 50 p~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~---------------------------~~~~~~~~~~gl~~d~d-G~l 99 (305)
T 3dr2_A 50 PAWWEAQRTLVWSDLVGRRVLGWRED-GT-VD---------------------------VLLDATAFTNGNAVDAQ-QRL 99 (305)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEETT-SC-EE---------------------------EEEESCSCEEEEEECTT-SCE
T ss_pred CeEeCCCCEEEEEECCCCEEEEEeCC-CC-EE---------------------------EEeCCCCccceeeECCC-CCE
Confidence 34588988 67778888999999873 21 11 11124456889999999 556
Q ss_pred EEEEEcCCeEEEEECCCCceeeeecc----cccceeeEEEcCCCCcEEEE----EeC-------------CCcEEEEEcc
Q 018293 138 LASASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWNHHSPQILLS----GSF-------------DRSVVMKDAR 196 (358)
Q Consensus 138 l~s~~~dg~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~ 196 (358)
+++...++.|.+|+.. ++....... ....+..+++.++| .++++ +.. .+.|..+|..
T Consensus 100 ~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 100 VHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS
T ss_pred EEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCC
Confidence 6655556789999976 543222211 11346789999999 76665 321 2567777776
Q ss_pred cCCCccceeeecCCeeeEEEcCCCCCeEEEEecC------CeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEec
Q 018293 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLED------GTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYN 269 (358)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~ 269 (358)
+++..... .......++|+|++. .++++... +.|..||+..... .....+ .........+++.
T Consensus 178 ~g~~~~~~--~~~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~l-------~~~~~~~~~~~~~pdgi~~d 247 (305)
T 3dr2_A 178 GSPLQRMA--DLDHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGAL-------HDRRHFASVPDGLPDGFCVD 247 (305)
T ss_dssp SCCCEEEE--EESSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTEE-------EEEEEEECCSSSCCCSEEEC
T ss_pred CCcEEEEe--cCCCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCCc-------cCCeEEEECCCCCCCeEEEC
Confidence 66544322 445678899999655 45555444 7899999875410 000111 1123345678999
Q ss_pred CCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEE
Q 018293 270 PLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334 (358)
Q Consensus 270 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~ 334 (358)
++| ++ .+++.+ .|.+|+.. ++. ...+.... .+.+++|.++++.+++ ++.+ .+..++
T Consensus 248 ~~G-~l-wv~~~~-gv~~~~~~-g~~--~~~~~~~~-~~~~~~f~~d~~~L~i-t~~~-~l~~~~ 303 (305)
T 3dr2_A 248 RGG-WL-WSSSGT-GVCVFDSD-GQL--LGHIPTPG-TASNCTFDQAQQRLFI-TGGP-CLWMLP 303 (305)
T ss_dssp TTS-CE-EECCSS-EEEEECTT-SCE--EEEEECSS-CCCEEEECTTSCEEEE-EETT-EEEEEE
T ss_pred CCC-CE-EEecCC-cEEEECCC-CCE--EEEEECCC-ceeEEEEeCCCCEEEE-EcCC-eEEEEE
Confidence 988 54 444444 49999984 442 22332223 4788999999886555 4444 344333
No 220
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.37 E-value=9.1e-10 Score=88.98 Aligned_cols=207 Identities=8% Similarity=0.045 Sum_probs=134.8
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 202 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 202 (358)
..+..++|+++++.++++-..++.|..+++........+.........+++++++..++++-...+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 45789999997566666666778999999876544333332234678999999764666666667899999986543222
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEec--CCeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCCCcEEEEE
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLE--DGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATG 279 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~~ 279 (358)
...........++++|+++.++++... .+.|..+++... . ...+ .........++++|+++.++++-
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~---------~-~~~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT---------N-RRILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC---------C-CEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC---------C-cEEEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 111112467899999966645555433 468888887643 1 1222 12234568999999874566666
Q ss_pred eCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 280 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 280 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
...+.|.++|........... .. .....++.. +.+++++....+.|.++|..+++.+...
T Consensus 186 ~~~~~I~~~~~~g~~~~~~~~--~~-~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 186 AGTHRAECLNPAQPGRRKVLE--GL-QYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp TTTTEEEEEETTEEEEEEEEE--CC-CSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEecCCCceEEEec--CC-CCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEE
Confidence 667889999997654222222 21 223556654 4557777777789999999988876654
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.36 E-value=7.9e-10 Score=94.30 Aligned_cols=248 Identities=10% Similarity=0.046 Sum_probs=150.0
Q ss_pred CcccCCCcEEEEEEecCC-----CceEEEEEEeccCCCCCceEeeceeecC-CcccceeeecCCccccCCCceEEecCC-
Q 018293 1 MTINPNDAVIVCARNEDD-----VSHLEVYILEESDGGDPNLYVHHHIIIP-AFPLCMAWLDCPLKDREKGNFMAVGSM- 73 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~l~~g~~- 73 (358)
|.++|+++.++++..... ...-.+.++|.... ... .+..++ .......-.|..+.|+|||++|+++..
T Consensus 123 ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~---~vv--~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~ 197 (426)
T 3c75_H 123 PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF---LPI--ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS 197 (426)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---CEE--EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS
T ss_pred eEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC---cEE--EEEECCCccccccCCCcceEEEcCCCCEEEEEecC
Confidence 468999999999864100 01227888888764 221 112221 000000011234566999999998864
Q ss_pred -CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEEC
Q 018293 74 -EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 152 (358)
Q Consensus 74 -dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 152 (358)
++.|.+.|+.+.+....+.+ +. +....|++...+++.+.||.+.+.+.
T Consensus 198 ~~~~VsVID~~t~kvv~~I~v--------------------------~g-----~~~~~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 198 PAPAVGVVDLEGKTFDRMLDV--------------------------PD-----CYHIFPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp SSCEEEEEETTTTEEEEEEEC--------------------------CS-----EEEEEEEETTEEEEEETTSSEEEEEC
T ss_pred CCCeEEEEECCCCeEEEEEEc--------------------------CC-----ceeeccCCCcEEEEEcCCCCEEEEEC
Confidence 58999999987554432211 00 12234444556777778888888888
Q ss_pred CCCceee----eecccccce-eeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc-ee-----------eecCCeeeEE
Q 018293 153 AAGKCNL----TLEHHTDKV-QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF-KW-----------AVAADVESLA 215 (358)
Q Consensus 153 ~~~~~~~----~~~~~~~~v-~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~-----------~~~~~i~~~~ 215 (358)
.+++... .+.....++ ..+.+.+++ ..++..+..+.+.+.|......... .+ ........++
T Consensus 247 ~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg-~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va 325 (426)
T 3c75_H 247 ADGETKVTNTEVFHTEDELLINHPAFSLRS-GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTA 325 (426)
T ss_dssp CTTCCEEEECCCCSCTTSCBCSCCEECTTT-CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEE
T ss_pred CCCcEEEEeeeeeccCCCceeeEeeecCCC-CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeE
Confidence 6655442 122112222 235678888 5555566788999999865432110 00 1122333478
Q ss_pred EcCCCCCeEEEEec---------CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe-CCCcE
Q 018293 216 WDPHAEHSFVVSLE---------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMV 285 (358)
Q Consensus 216 ~~~~~~~~~~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i 285 (358)
++|++..++++... ++.|.++|..+. +.+..+.... ...++.|+|++..++++.. .++.|
T Consensus 326 ~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~---------kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~V 395 (426)
T 3c75_H 326 YHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG---------ERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTL 395 (426)
T ss_dssp EEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC---------CEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEE
T ss_pred EcCCCCEEEEEecccccccccCCCCEEEEEECCCC---------eEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeE
Confidence 99976654554331 357999999987 6666665432 4789999999942777777 58999
Q ss_pred EEEecCCCCc
Q 018293 286 KLWDLSNNQP 295 (358)
Q Consensus 286 ~i~d~~~~~~ 295 (358)
.++|+.+.+.
T Consensus 396 sVID~~t~kv 405 (426)
T 3c75_H 396 HIYDAATGEE 405 (426)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCCE
Confidence 9999999984
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.35 E-value=5.6e-09 Score=88.25 Aligned_cols=236 Identities=18% Similarity=0.116 Sum_probs=139.6
Q ss_pred ccc--CCCceEEe-cCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceecccccc-CCCcccEEEEecCCCCC
Q 018293 60 KDR--EKGNFMAV-GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKK-GSHTDSVLGLAWNKEFR 135 (358)
Q Consensus 60 ~~s--~~~~~l~~-g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 135 (358)
.++ +++++|++ |..++.|+|+|+.+.... +... +........ .........+...|+ +
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~-p~~~----------------k~ie~~~~~~~~g~s~Ph~~~~~pd-G 149 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPRE-PKII----------------KVIEPEEVKKVSGYSRLHTVHCGPD-A 149 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTS-CEEE----------------EEECHHHHHHHHCEEEEEEEEECSS-C
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCC-ceee----------------eeechhhcccccCCCcccceeECCC-e
Confidence 346 77777654 667899999998643111 1000 000000000 001123456677899 4
Q ss_pred cEEEEEEcC------CeEEEEECCCCceeeeeccccc---ceeeEEEcCCCCcEEEEEe-------------------CC
Q 018293 136 NILASASAD------KQVKIWDVAAGKCNLTLEHHTD---KVQAVAWNHHSPQILLSGS-------------------FD 187 (358)
Q Consensus 136 ~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~~-------------------~d 187 (358)
+++++..+ |.|.+.|.++++.+.++..... .-..+.|+|++ +.++++. .+
T Consensus 150 -i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~ 227 (462)
T 2ece_A 150 -IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYG 227 (462)
T ss_dssp -EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSC
T ss_pred -EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCC-CEEEEccCcCccccccccchhhhhhccC
Confidence 67777666 7899999999999888863222 23458889999 6777774 37
Q ss_pred CcEEEEEcccCCCccceeeec---CCeeeEEE--cCCCCCeEEEEe-----cCCeEEEEEcccCCCCCCCCCCCccEE--
Q 018293 188 RSVVMKDARISTHSGFKWAVA---ADVESLAW--DPHAEHSFVVSL-----EDGTIKGFDIRTAKSDPDSTSQQSSFT-- 255 (358)
Q Consensus 188 g~i~i~d~~~~~~~~~~~~~~---~~i~~~~~--~~~~~~~~~~~~-----~dg~i~i~d~~~~~~~~~~~~~~~~~~-- 255 (358)
.+|.+||+.+.+.... .... .....+.| +|++...++++- .+++|.+|....+.. .....
T Consensus 228 d~V~v~D~~~~k~~~t-I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~-------~~~~vId 299 (462)
T 2ece_A 228 NRIHFWDLRKRKRIHS-LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW-------NAEKVIE 299 (462)
T ss_dssp CEEEEEETTTTEEEEE-EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE-------EEEEEEE
T ss_pred CEEEEEECCCCcEeeE-EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce-------eEEEEEe
Confidence 8999999987644332 2221 23445555 997664444444 677888776654211 11111
Q ss_pred Eee----------------cCCceeEEEecCCCCcEEEEEeC-CCcEEEEecCCC-CceeeEecCCC-------------
Q 018293 256 LHA----------------HDKAVCTISYNPLVPNLLATGST-DKMVKLWDLSNN-QPSCIASRNPK------------- 304 (358)
Q Consensus 256 ~~~----------------~~~~i~~i~~~~~~~~~l~~~~~-dg~i~i~d~~~~-~~~~~~~~~~~------------- 304 (358)
+.. -......|.++||+ ++|+++.. .+.|.+||+... ++..+......
T Consensus 300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG-rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD-KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp ECCEECCSSCCGGGGGGTEECCCCCCEEECTTS-CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCC
T ss_pred CCCccccccccccccccccCCCceeEEEECCCC-CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccccc
Confidence 111 02346889999999 66665554 788999998633 33233222211
Q ss_pred -CceeEEEEEcCCCCeEEEEE
Q 018293 305 -AGAVFSVAFSEDSPFVLAIG 324 (358)
Q Consensus 305 -~~~v~~~~~~~~~~~~l~~~ 324 (358)
.+.-..++++|||++++++.
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 01256799999999866655
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.35 E-value=1.3e-09 Score=90.75 Aligned_cols=199 Identities=12% Similarity=0.081 Sum_probs=128.6
Q ss_pred cEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc
Q 018293 124 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF 203 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 203 (358)
-..+..|+|+++.++++...++.|..||..+++.. .+. ....+.++.|++++ +++++ +.+ .|.+||..+++....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg-~l~v~-~~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDS-KQLIA-SDD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETT-EEEEE-ETT-EEEEEETTTCCEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCC-eEEEE-ECC-CEEEEECCCCcEEEE
Confidence 34677899986777788778899999999877543 333 34678999999998 65554 444 499999877654321
Q ss_pred eee----ecCCeeeEEEcCCCCCeEEEEec------CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCC
Q 018293 204 KWA----VAADVESLAWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 273 (358)
Q Consensus 204 ~~~----~~~~i~~~~~~~~~~~~~~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 273 (358)
... ....+..++++|++. ++++... .+.|..++ ++ . ...+..+......++|+|++.
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g---------~-~~~~~~~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KG---------K-VTKLFADISIPNSICFSPDGT 191 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TT---------E-EEEEEEEESSEEEEEECTTSC
T ss_pred eeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CC---------c-EEEeeCCCcccCCeEEcCCCC
Confidence 111 113578899999654 5544332 24555555 33 2 222223334567899999984
Q ss_pred cEEEEEeCCCcEEEEecC--CC-Cc---eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 274 NLLATGSTDKMVKLWDLS--NN-QP---SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~d~~--~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
.++++.+.++.|.+||+. ++ .. .....+.........++++++|. ++++...++.|.+|+. +++.+.
T Consensus 192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEE
T ss_pred EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECC-CCCEEE
Confidence 344555567899999986 44 32 12223333445678899999998 5666556688999998 455443
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.33 E-value=3.4e-13 Score=114.33 Aligned_cols=185 Identities=15% Similarity=0.078 Sum_probs=104.1
Q ss_pred CcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeee-cCCeee
Q 018293 135 RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV-AADVES 213 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~ 213 (358)
+..+++++.||.|..||.++|+.+..+.. ..+.+..+..++ ..+++++.||.|+.||..+++........ ...+.+
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 34889999999999999999999888875 455555555666 67777789999999999887664322111 111111
Q ss_pred -EEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCC
Q 018293 214 -LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN 292 (358)
Q Consensus 214 -~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~ 292 (358)
..+.. + ..+++++.++.++.||.+++ +.+..+..+. ...++|++ ..+++++.|+.|+.||.++
T Consensus 86 sp~~~~-~-~~v~~g~~dg~v~a~D~~tG---------~~~w~~~~~~----~~~~~p~~-~~v~~~~~dg~v~a~d~~t 149 (369)
T 2hz6_A 86 SPCRSS-D-GILYMGKKQDIWYVIDLLTG---------EKQQTLSSAF----ADSLSPST-SLLYLGRTEYTITMYDTKT 149 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC------------------------------------EEEEEEEEEEECCCSSS
T ss_pred CceEec-C-CEEEEEeCCCEEEEEECCCC---------cEEEEecCCC----cccccccC-CEEEEEecCCEEEEEECCC
Confidence 11111 2 36778888999999999988 4444444332 23455665 7888889999999999999
Q ss_pred CCceeeEecCCCCceeEEEEEcCCC---CeEEEEEccCCeEEEEEccCCCcccc
Q 018293 293 NQPSCIASRNPKAGAVFSVAFSEDS---PFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 293 ~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
++..-...... .....+.++. .. +++++.||.|+.||..+++.+.+
T Consensus 150 G~~~W~~~~~~----~~~~~~~~~~~~~~~-v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 150 RELRWNATYFD----YAASLPEDDVDYKMS-HFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp SSCCCEEEEEE----ECCBCCCCCTTCCCC-EEEEETSCEEEEECTTTCCEEEE
T ss_pred CCEEEeEeccc----ccCccccCCccccce-EEEECCCCEEEEEECCCCcEEEE
Confidence 87433222211 1223333331 32 55678899999999999887643
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.33 E-value=2.4e-10 Score=104.63 Aligned_cols=249 Identities=12% Similarity=0.059 Sum_probs=145.6
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCC---CCCcEEEE
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK---EFRNILAS 140 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~l~s 140 (358)
.+..+++++.|+.|..+|..+++......... +......+..+| + + .++.
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~-------------------------~~~~~~~~~~sP~v~~-g-~v~v 172 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRA-------------------------DHKRSYTITGAPRVVN-G-KVVI 172 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCS-------------------------CTTSCCBCCSCCEEET-T-EEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcC-------------------------CCCCCccccCCcEEEC-C-EEEE
Confidence 46678888899999999998877654322110 000000111111 3 3 3444
Q ss_pred EE------cCCeEEEEECCCCceeeeecccc-------------------------------cceeeEEEcCCCCcEEEE
Q 018293 141 AS------ADKQVKIWDVAAGKCNLTLEHHT-------------------------------DKVQAVAWNHHSPQILLS 183 (358)
Q Consensus 141 ~~------~dg~v~iwd~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~~~~~~l~~ 183 (358)
++ .+|.|..||.++|+.+..+.... .....+.+.|+. .+++.
T Consensus 173 g~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~ 251 (689)
T 1yiq_A 173 GNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYI 251 (689)
T ss_dssp CCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEE
T ss_pred EeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-CEEEE
Confidence 43 37899999999999887764210 011257788887 67888
Q ss_pred EeCCCc-------------------EEEEEcccCCCccceeeec---------CCeeeEEEcCCCC--CeEEEEecCCeE
Q 018293 184 GSFDRS-------------------VVMKDARISTHSGFKWAVA---------ADVESLAWDPHAE--HSFVVSLEDGTI 233 (358)
Q Consensus 184 ~~~dg~-------------------i~i~d~~~~~~~~~~~~~~---------~~i~~~~~~~~~~--~~~~~~~~dg~i 233 (358)
+..++. |..+|.++++..-...... ..+.......++. ..++.++.+|.+
T Consensus 252 ~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l 331 (689)
T 1yiq_A 252 GVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFF 331 (689)
T ss_dssp ECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEE
T ss_pred eCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeE
Confidence 877763 9999999887654322211 1111111111221 268888999999
Q ss_pred EEEEcccCCCCCCCCCCC-cc-EEEe-----------------ecC-----------CceeEEEecCCCCcEEEEEeC--
Q 018293 234 KGFDIRTAKSDPDSTSQQ-SS-FTLH-----------------AHD-----------KAVCTISYNPLVPNLLATGST-- 281 (358)
Q Consensus 234 ~i~d~~~~~~~~~~~~~~-~~-~~~~-----------------~~~-----------~~i~~i~~~~~~~~~l~~~~~-- 281 (358)
+++|.++++......... .. ..+. ... .....++++|+. .++++...
T Consensus 332 ~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~-~~~yv~~~~~ 410 (689)
T 1yiq_A 332 YVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT-GLVYIPAHIM 410 (689)
T ss_dssp EEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT-TEEEEEEEEC
T ss_pred EEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC-CEEEEecccc
Confidence 999999884310000000 00 0000 000 011236788876 56665422
Q ss_pred -------------------------------------------CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCC
Q 018293 282 -------------------------------------------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP 318 (358)
Q Consensus 282 -------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 318 (358)
+|.|..||+.+++. +.....+ .++....+...+.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~--~W~~~~~-~~~~~g~~~tagg 487 (689)
T 1yiq_A 411 SAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA--AWEVPYV-TIFNGGTLSTAGN 487 (689)
T ss_dssp CEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE--EEEEEES-SSCCCCEEEETTT
T ss_pred ceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe--EeEccCC-CCccCccceECCC
Confidence 37799999999984 3333222 2233334555666
Q ss_pred eEEEEEccCCeEEEEEccCCCcccccc
Q 018293 319 FVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 319 ~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
+++.++.||.|+.||.++|+.+.+.-
T Consensus 488 -lvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 488 -LVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp -EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred -EEEEECCCCcEEEEECCCCccceeee
Confidence 67789999999999999999886543
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=1e-09 Score=92.09 Aligned_cols=246 Identities=10% Similarity=0.038 Sum_probs=141.4
Q ss_pred CcccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeecee-ecCCcccceeeecCCccccCCCceEEecCC-----C
Q 018293 1 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHI-IIPAFPLCMAWLDCPLKDREKGNFMAVGSM-----E 74 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-----d 74 (358)
++++|+|+++++...-++ +...++.++ .+ .+...... ..... .+ -.+..++++++|+++++-.. +
T Consensus 22 va~~~~g~~~v~~~~~~~-~~~~l~~~~--~g---~~~~~p~~~~~~~~--~~-~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 22 ITLTPDGRLFLSLHQFYQ-PEMQVAELT--QD---GLIPFPPQSGNAII--TF-DTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp EEECTTSCEEEEECGGGC-CSCSEEEEE--TT---EEEESCCCCSSCCC--CC-SCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred EEECCCCCEEEEeCCCCC-CceEEEEEC--CC---CeecCCCcccCccc--ce-eEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 468899999888632211 114566665 22 11100000 00000 00 01224456889887776543 5
Q ss_pred CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE---cCCeEEEEE
Q 018293 75 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS---ADKQVKIWD 151 (358)
Q Consensus 75 g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---~dg~v~iwd 151 (358)
+.|.+||+.+++......+.. ....+...+..++++++++..+++.. .++.|.+||
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~---------------------~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d 151 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPP---------------------PITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVD 151 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCT---------------------TTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEE
T ss_pred CeEEEEECCCCeEEEEEECCh---------------------hhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEE
Confidence 789999987655332211100 01123345688999987565556655 688999999
Q ss_pred CCCCceeeeecccc-----------------------------cceeeEEEcCCCCcEEEEEeCCC-cEEEEEcccCCC-
Q 018293 152 VAAGKCNLTLEHHT-----------------------------DKVQAVAWNHHSPQILLSGSFDR-SVVMKDARISTH- 200 (358)
Q Consensus 152 ~~~~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~- 200 (358)
+.+++..+.+.+|. ..+..++|+|++ +.|+.+..++ .+..++......
T Consensus 152 ~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg-~~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 152 LQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN-EWLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp TTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS-CEEEEEESSCSEEEEEEHHHHTCT
T ss_pred CCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCC-CEEEEEeCCCCeEEEEEHHHhcCC
Confidence 98887655543321 235789999999 6677666555 555555321110
Q ss_pred --c-----c--ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe-ecCCceeEEEecC
Q 018293 201 --S-----G--FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCTISYNP 270 (358)
Q Consensus 201 --~-----~--~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~i~~i~~~~ 270 (358)
. . ...........++++++ ++++++...++.|.+||..++ ....... .+.....++++.+
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgia~d~~-G~l~va~~~~~~V~~~d~~~G---------~~~~~~~~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGISIDKD-HNIYVGDLAHSAIGVITSADR---------AYKLLVTDEKLSWTDSFNFGS 300 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCEEECTT-CCEEEEEGGGTEEEEEETTTT---------EEEEEEECGGGSCEEEEEECT
T ss_pred CCChhhhhcceEecccCCCCceEEECCC-CCEEEEccCCCeEEEEECCCC---------CEEEEEECCceecCCeeEECC
Confidence 0 0 11233446778999995 568888888999999998443 2111111 1234578999999
Q ss_pred CCCcEEEEEeCCCcEEEE
Q 018293 271 LVPNLLATGSTDKMVKLW 288 (358)
Q Consensus 271 ~~~~~l~~~~~dg~i~i~ 288 (358)
++ .++++.+..+.+.+|
T Consensus 301 ~g-~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 301 DG-YLYFDCNQLHHSAPL 317 (343)
T ss_dssp TS-CEEEEECCGGGSGGG
T ss_pred CC-cEEEEeCcccccccc
Confidence 87 677776655444433
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.27 E-value=4.2e-10 Score=102.82 Aligned_cols=244 Identities=11% Similarity=0.080 Sum_probs=149.1
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEE-EecCCCCCcEEEEEE
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG-LAWNKEFRNILASAS 142 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s~~ 142 (358)
++..+++++.|+.|..+|..+++.......... . .....+.+ .... + + .++.++
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~---------------~-------~~~~~~~~~p~v~-~-~-~v~v~~ 181 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEG---------------Q-------KGSLTITGAPRVF-K-G-KVIIGN 181 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTT---------------C-------CSSCBCCSCCEEE-T-T-EEEECC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcC---------------c-------CcCcccccCcEEE-C-C-EEEEEe
Confidence 466788888999999999988776543221100 0 00001110 0011 2 3 444544
Q ss_pred c------CCeEEEEECCCCceeeeecccccc--------------------------------eeeEEEcCCCCcEEEEE
Q 018293 143 A------DKQVKIWDVAAGKCNLTLEHHTDK--------------------------------VQAVAWNHHSPQILLSG 184 (358)
Q Consensus 143 ~------dg~v~iwd~~~~~~~~~~~~~~~~--------------------------------v~~~~~~~~~~~~l~~~ 184 (358)
. ++.|..+|.++|+.+..+...... ...++++|++ ..++.+
T Consensus 182 ~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~ 260 (677)
T 1kb0_A 182 GGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVG 260 (677)
T ss_dssp BCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEE
T ss_pred cccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-CEEEEE
Confidence 3 799999999999988776532111 1356788887 677777
Q ss_pred eCCC-------------------cEEEEEcccCCCccceeee---------cCCeeeEEEcCCCC--CeEEEEecCCeEE
Q 018293 185 SFDR-------------------SVVMKDARISTHSGFKWAV---------AADVESLAWDPHAE--HSFVVSLEDGTIK 234 (358)
Q Consensus 185 ~~dg-------------------~i~i~d~~~~~~~~~~~~~---------~~~i~~~~~~~~~~--~~~~~~~~dg~i~ 234 (358)
..++ .|..+|.++++..-..... ......+....++. ..++.++.+|.++
T Consensus 261 ~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~ 340 (677)
T 1kb0_A 261 TGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFF 340 (677)
T ss_dssp CCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEE
T ss_pred CCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEE
Confidence 6654 4899999888765422211 11122222222332 5788899999999
Q ss_pred EEEcccCCCCCCCCCCCccEEEeecC-----------Cc------------------------eeEEEecCCCCcEEEEE
Q 018293 235 GFDIRTAKSDPDSTSQQSSFTLHAHD-----------KA------------------------VCTISYNPLVPNLLATG 279 (358)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~~~~~~~-----------~~------------------------i~~i~~~~~~~~~l~~~ 279 (358)
++|..+++ .+....... .+ -..++++|+. .++++.
T Consensus 341 ~lD~~tG~---------~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~-~~~yv~ 410 (677)
T 1kb0_A 341 VLDRTNGK---------FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT-GLVYLP 410 (677)
T ss_dssp EEETTTCC---------EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT-TEEEEE
T ss_pred EEECCCCC---------EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC-CEEEEe
Confidence 99999884 332222110 00 1256788877 566664
Q ss_pred eC-------------------------------------------CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCC
Q 018293 280 ST-------------------------------------------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 316 (358)
Q Consensus 280 ~~-------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 316 (358)
.. .|.|..||+.+++. +.... +..++....+..+
T Consensus 411 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~--~W~~~-~~~~~~~g~~~~~ 487 (677)
T 1kb0_A 411 AQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA--AWSVE-HVSPWNGGTLTTA 487 (677)
T ss_dssp EEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE--EEEEE-ESSSCCCCEEEET
T ss_pred ChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE--EeecC-CCCCCcCcceEeC
Confidence 33 27799999999884 33322 2233444456667
Q ss_pred CCeEEEEEccCCeEEEEEccCCCcccccccc
Q 018293 317 SPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 347 (358)
Q Consensus 317 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 347 (358)
+. +++.++.||.+++||..+++.+.+....
T Consensus 488 g~-~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 488 GN-VVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp TT-EEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CC-EEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 77 5677899999999999999998765543
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.26 E-value=2.8e-10 Score=99.46 Aligned_cols=246 Identities=11% Similarity=0.095 Sum_probs=156.5
Q ss_pred CCCceEEecCC-CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEec-C-CCCCcEEE
Q 018293 63 EKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAW-N-KEFRNILA 139 (358)
Q Consensus 63 ~~~~~l~~g~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~~~l~ 139 (358)
+||++|.+... ++.|.+.|+++.+......+. ....+..+++ + |+ +.+++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip--------------------------~g~~phg~~~~~~p~-~~~v~ 151 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIP--------------------------NAKGIHGLRPQKWPR-SNYVF 151 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECS--------------------------SCCSEEEEEECCSSB-CSEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCC--------------------------CCCCCcceeeeecCC-CcEEE
Confidence 38888776654 567999999876654422111 2234667777 4 78 44666
Q ss_pred EEE------------------cCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCC-------------
Q 018293 140 SAS------------------ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR------------- 188 (358)
Q Consensus 140 s~~------------------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------------- 188 (358)
+++ .++.+.+.|.++++...++.-.. ....++++|+| .++++++.+.
T Consensus 152 ~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdG-k~~~vt~~~se~~~~i~~~~~~~ 229 (595)
T 1fwx_A 152 CNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEG-KWAFSTSYNSEKGMTLPEMTAAE 229 (595)
T ss_dssp EEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSS-SEEEEEESCTTCCSSHHHHTCCS
T ss_pred EecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCC-CEEEEEecCcccCcchhhccccc
Confidence 663 35689999999999888886433 45778899998 6666666442
Q ss_pred -------------------------cEEEEEccc--CCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccC
Q 018293 189 -------------------------SVVMKDARI--STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241 (358)
Q Consensus 189 -------------------------~i~i~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~ 241 (358)
.|.+.|.++ ++.............++.++||+...++++..+.+|.++|+.+.
T Consensus 230 ~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 230 MDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp EEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred cceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 366667666 33212234455678899999988777777778999999999964
Q ss_pred CCC--CCCCCC-CccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCC--------CceeeEecCCCCcee--
Q 018293 242 KSD--PDSTSQ-QSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN--------QPSCIASRNPKAGAV-- 308 (358)
Q Consensus 242 ~~~--~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~~v-- 308 (358)
+.. ...... ........ ......++|+|+| ...++.-.|+.|.+||+... ....+..+..|-.+-
T Consensus 310 ~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~ 387 (595)
T 1fwx_A 310 DAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHL 387 (595)
T ss_dssp HHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEE
T ss_pred ccccccccCcccceEEEcCC-CCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccc
Confidence 100 000000 11222222 3446889999999 77777778999999999761 111344444443321
Q ss_pred ---EEEEEcCCCCeEEEEEccC-CeE-----------EEEEccCCC
Q 018293 309 ---FSVAFSEDSPFVLAIGGSK-GKL-----------EIWDTLSDA 339 (358)
Q Consensus 309 ---~~~~~~~~~~~~l~~~~~d-g~i-----------~vw~~~~~~ 339 (358)
..+.++|||++++++.... ..+ .++|+..++
T Consensus 388 ~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 388 KTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred eeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 1235689999866655433 334 889995544
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.26 E-value=2.7e-12 Score=108.81 Aligned_cols=204 Identities=13% Similarity=0.052 Sum_probs=108.7
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 143 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 143 (358)
++..+++++.||.|+.||..+++...... . +.+.+..+..+ +..+++++.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~---------------------------~--~~~~s~p~~~~-g~~~v~~s~ 57 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK---------------------------E--DPVLQVPTHVE-EPAFLPDPN 57 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE---------------------------C--CCSCCCC------CCEEECTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec---------------------------C--CCceecceEcC-CCEEEEeCC
Confidence 57889999999999999998776543211 1 22333334455 456777789
Q ss_pred CCeEEEEECCCCceeeeeccccc-ceee-EEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEEcCCCC
Q 018293 144 DKQVKIWDVAAGKCNLTLEHHTD-KVQA-VAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAE 221 (358)
Q Consensus 144 dg~v~iwd~~~~~~~~~~~~~~~-~v~~-~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 221 (358)
||.|..||.++++.+..+..+.. .+.+ ..+. .+ ..+++++.++.++.||.++++......... ...++| .+
T Consensus 58 dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~-~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p-~~ 130 (369)
T 2hz6_A 58 DGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SD-GILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP-ST 130 (369)
T ss_dssp TCCEEEC-----CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-------------------------
T ss_pred CCEEEEEECCCCceeeeeeccCccccccCceEe-cC-CEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc-cC
Confidence 99999999999987766653321 1111 1111 23 467788889999999999887754332221 234556 44
Q ss_pred CeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC--CcEEEEEeCCCcEEEEecCCCCceeeE
Q 018293 222 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV--PNLLATGSTDKMVKLWDLSNNQPSCIA 299 (358)
Q Consensus 222 ~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~ 299 (358)
..+++++.++.|+.||.+++ +.+..+..+. .....+.++. ...+++++.||.|+.||..+++. +.
T Consensus 131 ~~v~~~~~dg~v~a~d~~tG---------~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~--~W 197 (369)
T 2hz6_A 131 SLLYLGRTEYTITMYDTKTR---------ELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV--LW 197 (369)
T ss_dssp --EEEEEEEEEEECCCSSSS---------SCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE--EE
T ss_pred CEEEEEecCCEEEEEECCCC---------CEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcE--EE
Confidence 57888889999999999987 3333332211 1223333321 13567788999999999999884 33
Q ss_pred ecCCCCceeE-EEEEcCCCC
Q 018293 300 SRNPKAGAVF-SVAFSEDSP 318 (358)
Q Consensus 300 ~~~~~~~~v~-~~~~~~~~~ 318 (358)
.... ..++. ...++++|.
T Consensus 198 ~~~~-~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 198 IQNY-ASPVVAFYVWQREGL 216 (369)
T ss_dssp EEEC-SSCEEEEEECTTSSC
T ss_pred EecC-CCceEEEEEecCCce
Confidence 3322 23333 344555653
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.22 E-value=5e-09 Score=83.16 Aligned_cols=199 Identities=9% Similarity=-0.022 Sum_probs=134.0
Q ss_pred cEEEEecCCCCCcEEEEEEc--CCeEEEEECCCCceeeeeccccc-ceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC
Q 018293 124 SVLGLAWNKEFRNILASASA--DKQVKIWDVAAGKCNLTLEHHTD-KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 200 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 200 (358)
....+.|+++ +.++++.+. ++.|+++|+.+++.+..+.-... ....+++. +..+.++.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 3679999998 545555443 58999999999998888752221 22345554 435666666789999999988766
Q ss_pred ccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec--C---CceeEEEecCCCCcE
Q 018293 201 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--D---KAVCTISYNPLVPNL 275 (358)
Q Consensus 201 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~---~~i~~i~~~~~~~~~ 275 (358)
..... .. ......+++++.. ++++..++.|.++|..+. +....+... . ...+.+.|. ++ .+
T Consensus 99 ~~~i~-~g-~~~g~glt~Dg~~-l~vs~gs~~l~viD~~t~---------~v~~~I~Vg~~~~p~~~~nele~~-dg-~l 164 (266)
T 2iwa_A 99 IKNFT-HQ-MKDGWGLATDGKI-LYGSDGTSILYEIDPHTF---------KLIKKHNVKYNGHRVIRLNELEYI-NG-EV 164 (266)
T ss_dssp EEEEE-CC-SSSCCEEEECSSS-EEEECSSSEEEEECTTTC---------CEEEEEECEETTEECCCEEEEEEE-TT-EE
T ss_pred EEEEE-CC-CCCeEEEEECCCE-EEEECCCCeEEEEECCCC---------cEEEEEEECCCCcccccceeEEEE-CC-EE
Confidence 55322 22 1122334555554 445557889999999876 444444322 1 135678888 55 55
Q ss_pred EEEEeCCCcEEEEecCCCCceeeEecCC-----------CCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 276 LATGSTDKMVKLWDLSNNQPSCIASRNP-----------KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 276 l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
.+....++.|.+.|..+++......+.+ .....+.++|+|+++.+++++...+.+.+.++....
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 5555567899999999998544444321 113568999999998889999999999999987643
No 231
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.21 E-value=2.7e-09 Score=87.96 Aligned_cols=202 Identities=10% Similarity=0.068 Sum_probs=128.4
Q ss_pred CcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC
Q 018293 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 200 (358)
Q Consensus 121 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 200 (358)
.........|+|++..++++...++.|..|+. +++ ...+..+...+..+++++++ +++++...++.|.+|+.. ++.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCC-CEEEEECCCCEEEEECCC-CCE
Confidence 44567789999996557888888899999997 454 34455456778999999998 666655556789999975 332
Q ss_pred ccceee----ecCCeeeEEEcCCCCCeEEE----Eec-------------CCeEEEEEcccCCCCCCCCCCCccEEEeec
Q 018293 201 SGFKWA----VAADVESLAWDPHAEHSFVV----SLE-------------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 259 (358)
Q Consensus 201 ~~~~~~----~~~~i~~~~~~~~~~~~~~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 259 (358)
...... ....+..+++++++ .++++ |.. .+.|..||..++ .... +. .
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g---------~~~~-~~-~ 186 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS---------PLQR-MA-D 186 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC---------CCEE-EE-E
T ss_pred EEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCC---------cEEE-Ee-c
Confidence 211111 12346789999965 46664 322 246777776554 2222 22 3
Q ss_pred CCceeEEEecCCCCcEEEEEeCC------CcEEEEecCCCCceeeEe-cCCCCceeEEEEEcCCCCeEEEEEccCCeEEE
Q 018293 260 DKAVCTISYNPLVPNLLATGSTD------KMVKLWDLSNNQPSCIAS-RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEI 332 (358)
Q Consensus 260 ~~~i~~i~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 332 (358)
....+.++|+|++ +.|+.+... +.|.+|++.......... .....+....++++++|+ ++++ +.+ .|.+
T Consensus 187 ~~~p~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~-~~~-gv~~ 262 (305)
T 3dr2_A 187 LDHPNGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSS-SGT-GVCV 262 (305)
T ss_dssp ESSEEEEEECTTS-SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEEC-CSS-EEEE
T ss_pred CCCCcceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEe-cCC-cEEE
Confidence 3456889999998 666665554 689999987543111111 111233455789999998 4553 444 5999
Q ss_pred EEccCCCcccc
Q 018293 333 WDTLSDAGISN 343 (358)
Q Consensus 333 w~~~~~~~~~~ 343 (358)
|+. +++.+..
T Consensus 263 ~~~-~g~~~~~ 272 (305)
T 3dr2_A 263 FDS-DGQLLGH 272 (305)
T ss_dssp ECT-TSCEEEE
T ss_pred ECC-CCCEEEE
Confidence 998 4554443
No 232
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.19 E-value=9.8e-08 Score=78.95 Aligned_cols=210 Identities=12% Similarity=0.082 Sum_probs=133.7
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCC----CceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAA----GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 198 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 198 (358)
..+..++|++.++.++++-..++.|..+++.. ......+...-.....+++.+.++.++++-...+.|.+.++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 45789999987566666666678999999876 22222232222456788998765466666677889999998754
Q ss_pred CCccceeeecCCeeeEEEcCCCCCeEEEEecC-CeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCCCcEE
Q 018293 199 THSGFKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLL 276 (358)
Q Consensus 199 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l 276 (358)
...............++++|.++.++++.... +.|..+++... ....+ ...-...+.++++|+++.+.
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~----------~~~~~~~~~~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV----------DIYSLVTENIQWPNGITLDLLSGRLY 179 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----------CEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC----------CeEEEEECCCCCceEEEEeccCCEEE
Confidence 32221222235678999999666555555443 78888887542 22222 22234568999999875666
Q ss_pred EEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 277 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 277 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
++-+..+.|..+|+.......+............+++.. + +++++-...+.|..++..+++.+...
T Consensus 180 ~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~-~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 180 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D-KVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-T-EEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-C-EEEEEECCCCeEEEEeCCCCcceEEE
Confidence 666667889999997655433333222223456777753 3 47887778889999998777765544
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.19 E-value=8.4e-08 Score=77.36 Aligned_cols=218 Identities=10% Similarity=0.020 Sum_probs=130.6
Q ss_pred cccCCC-ceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEE
Q 018293 60 KDREKG-NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 138 (358)
Q Consensus 60 ~~s~~~-~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 138 (358)
++++++ .++++-..++.|..++.+...... ...........+++.++++.++
T Consensus 42 ~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~---------------------------~~~~~~~~p~~ia~d~~~~~ly 94 (267)
T 1npe_A 42 AFDCVDKVVYWTDISEPSIGRASLHGGEPTT---------------------------IIRQDLGSPEGIALDHLGRTIF 94 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEESSSCCCEE---------------------------EECTTCCCEEEEEEETTTTEEE
T ss_pred EEecCCCEEEEEECCCCEEEEEecCCCCcEE---------------------------EEECCCCCccEEEEEecCCeEE
Confidence 347755 455555667899999986432100 0011224678999998756666
Q ss_pred EEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeC--CCcEEEEEcccCCCccceeeecCCeeeEEE
Q 018293 139 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF--DRSVVMKDARISTHSGFKWAVAADVESLAW 216 (358)
Q Consensus 139 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 216 (358)
++-...+.|.++++..................++++|+++.++++... .+.|..+++..................+++
T Consensus 95 v~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~ 174 (267)
T 1npe_A 95 WTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTF 174 (267)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEE
T ss_pred EEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEE
Confidence 666667899999986433222222222456899999976354444433 467888887643321111112245788999
Q ss_pred cCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce
Q 018293 217 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 296 (358)
+++++.++++-...+.|..+|.... ........ ......++.. ++.++++....+.|.++|..+++.
T Consensus 175 d~~~~~lyv~d~~~~~I~~~~~~g~---------~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~- 241 (267)
T 1npe_A 175 DAFSSQLCWVDAGTHRAECLNPAQP---------GRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKE- 241 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTEE---------EEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEE-
T ss_pred cCCCCEEEEEECCCCEEEEEecCCC---------ceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCc-
Confidence 9976666677777789999998753 22222222 2233566654 335555555678899999988773
Q ss_pred eeEecCCCC-ceeEEEEEcCCCC
Q 018293 297 CIASRNPKA-GAVFSVAFSEDSP 318 (358)
Q Consensus 297 ~~~~~~~~~-~~v~~~~~~~~~~ 318 (358)
+..+.... .....+++.|++.
T Consensus 242 -~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 242 -MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp -EEEECCSSCCCCCCEEEECSCC
T ss_pred -eEEEccccccccceeeecCccC
Confidence 33333222 2356677777764
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.17 E-value=2.3e-09 Score=89.89 Aligned_cols=257 Identities=9% Similarity=-0.028 Sum_probs=147.9
Q ss_pred CcccCCCcEEEEEEecCC-----CceEEEEEEeccCCCCCceEeeceeecCC-cccceeeecCCccccCCCceEEecCC-
Q 018293 1 MTINPNDAVIVCARNEDD-----VSHLEVYILEESDGGDPNLYVHHHIIIPA-FPLCMAWLDCPLKDREKGNFMAVGSM- 73 (358)
Q Consensus 1 l~~~p~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~g~~- 73 (358)
+.++|+++.+.++....+ ...-.+.++|....+ .. .+..++. .-....-.|..+.++|||++|+++..
T Consensus 70 i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~---vv--~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~ 144 (368)
T 1mda_H 70 AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL---PI--ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp EEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC---EE--EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS
T ss_pred eEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC---EE--EEEECCCccccccCCCcceEEEcCCCCEEEEEccC
Confidence 468999999999964100 012378999988752 21 1222220 00000001234456999999998864
Q ss_pred -CCeEEE--EEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEE
Q 018293 74 -EPAIEI--WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 150 (358)
Q Consensus 74 -dg~i~v--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 150 (358)
+..|.+ +|..+ .....+ + + +..+.|++...+++.+.||.+.+.
T Consensus 145 ~~~~v~V~~iD~~t---v~~i~v--------------------------~--~---~~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 145 SSAAAGLSVPGASD---DQLTKS--------------------------A--S---CFHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp SSCEEEEEETTTEE---EEEEEC--------------------------S--S---CCCCEEEETTEEECCCCTTSCEEE
T ss_pred CCCeEEEEEEchhh---ceEEEC--------------------------C--C---ceEEccCCCeEEEEEcCCCCEEEE
Confidence 467888 88865 111000 0 0 122345555666777788888888
Q ss_pred ECCC-----Cceee----eecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc-cee-----------eecC
Q 018293 151 DVAA-----GKCNL----TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKW-----------AVAA 209 (358)
Q Consensus 151 d~~~-----~~~~~----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~-----------~~~~ 209 (358)
|+++ ++... .+.-...+. . .+++ ..++..+. +.+.+.|+....... ... ....
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~-~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~ 264 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYP-GMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSA 264 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTT-TEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEEC
T ss_pred ECccccccCCeEEEEeeeeeeCCCCcc---c-cccC-CEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccC
Confidence 8876 44331 122122333 3 5555 44555555 999999986532110 000 0112
Q ss_pred CeeeEEEcCCCCCeEEEEe---c-----CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe-
Q 018293 210 DVESLAWDPHAEHSFVVSL---E-----DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS- 280 (358)
Q Consensus 210 ~i~~~~~~~~~~~~~~~~~---~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~- 280 (358)
....++++|++..++++.. . ++.+.++|+.+. +.+..+.... ....++|+|++..++++..
T Consensus 265 g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~---------~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~ 334 (368)
T 1mda_H 265 GFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG---------QTSGPISNGH-DSDAIIAAQDGASDNYANSA 334 (368)
T ss_dssp SSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC---------CEEECCEEEE-EECEEEECCSSSCEEEEEET
T ss_pred cceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC---------eEEEEEECCC-CcceEEECCCCCEEEEEccC
Confidence 2333789997665444433 1 235669999987 5555554433 5789999999955777777
Q ss_pred CCCcEEEEecCCCCceeeEecCCCCceeEEEEEcC
Q 018293 281 TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 315 (358)
Q Consensus 281 ~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 315 (358)
.++.|.++|+.+.+ .+..+.... ....+++.+
T Consensus 335 ~~~~VsVID~~t~k--vv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 335 GTEVLDIYDAASDQ--DQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp TTTEEEEEESSSCE--EEEECCCCS-CCCEEECCC
T ss_pred CCCeEEEEECCCCc--EEEEEECCC-CCCEEEeec
Confidence 69999999999988 344444332 233455443
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.17 E-value=2.9e-09 Score=89.95 Aligned_cols=196 Identities=14% Similarity=0.106 Sum_probs=127.8
Q ss_pred ecC--CCCCcEEEEEEcCCeEEEEECCCC----ceeeeec-------ccccceeeEEEcCCCCcEEEEEeCC------Cc
Q 018293 129 AWN--KEFRNILASASADKQVKIWDVAAG----KCNLTLE-------HHTDKVQAVAWNHHSPQILLSGSFD------RS 189 (358)
Q Consensus 129 ~~~--~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d------g~ 189 (358)
.++ ++...+++.+..++.|.++|+.+. +...++. ........+...|++ +++++..+ |.
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGG 165 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCe
Confidence 446 775667777888899999999755 5555552 111245667888998 56665555 78
Q ss_pred EEEEEcccCCCccceeeec---CCeeeEEEcCCCCCeEEEEe-------------------cCCeEEEEEcccCCCCCCC
Q 018293 190 VVMKDARISTHSGFKWAVA---ADVESLAWDPHAEHSFVVSL-------------------EDGTIKGFDIRTAKSDPDS 247 (358)
Q Consensus 190 i~i~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~-------------------~dg~i~i~d~~~~~~~~~~ 247 (358)
+.++|..+.+.+....... .....+.|+|++ +.+++.. .+.+|.+||+.+.
T Consensus 166 v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~------ 238 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR------ 238 (462)
T ss_dssp EEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT------
T ss_pred EEEEECCCCeEEEEEccCCCCccccceEEECCCC-CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC------
Confidence 9999999887655332111 224458889955 4677663 3689999999875
Q ss_pred CCCCccEEEeec-C-CceeEEEe--cCCCCcEEEEEe------CCCcEEEEecCCCCceeeEe--cCCC-----------
Q 018293 248 TSQQSSFTLHAH-D-KAVCTISY--NPLVPNLLATGS------TDKMVKLWDLSNNQPSCIAS--RNPK----------- 304 (358)
Q Consensus 248 ~~~~~~~~~~~~-~-~~i~~i~~--~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~--~~~~----------- 304 (358)
+....+... . .....+.| +|++ .++++++ .+++|.+|....++...... ....
T Consensus 239 ---k~~~tI~vg~~g~~P~~i~f~~~Pdg-~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~ 314 (462)
T 2ece_A 239 ---KRIHSLTLGEENRMALELRPLHDPTK-LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILK 314 (462)
T ss_dssp ---EEEEEEESCTTEEEEEEEEECSSTTC-CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGG
T ss_pred ---cEeeEEecCCCCCccceeEeeECCCC-CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccc
Confidence 444455432 1 23344544 9998 5555544 56788877665543211111 1110
Q ss_pred -----CceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 305 -----AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 305 -----~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
......|.+++||++++++.-..+.|.+||+..
T Consensus 315 ~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 315 PFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp GGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 134678999999999888888889999999864
No 236
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.16 E-value=6.1e-08 Score=82.39 Aligned_cols=226 Identities=12% Similarity=0.082 Sum_probs=137.9
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 143 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 143 (358)
++..+++++.++.|..+|..+++......... .....++ .. + + .++.++.
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-----------------------~~~~~p~----~~-~-~-~v~v~~~ 151 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG-----------------------EALSRPV----VS-D-G-LVLIHTS 151 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSS-----------------------CCCSCCE----EE-T-T-EEEEECT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC-----------------------ceEcCCE----EE-C-C-EEEEEcC
Confidence 45677788889999999998766543221100 0011111 11 2 3 6778889
Q ss_pred CCeEEEEECCCCceeeeecccccce-----eeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecC-------C-
Q 018293 144 DKQVKIWDVAAGKCNLTLEHHTDKV-----QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA-------D- 210 (358)
Q Consensus 144 dg~v~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~- 210 (358)
++.|..+|.++++.+.......... ...... + ..++.+..++.+..+|..+++.......... .
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~-~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~ 228 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--F-GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRL 228 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--T-TEEEECCTTTEEEEEETTTCCEEEEEECCC----------
T ss_pred CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--C-CEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccc
Confidence 9999999999999887765432211 122222 2 4577788899999999988765432211100 0
Q ss_pred --e-eeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEE
Q 018293 211 --V-ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKL 287 (358)
Q Consensus 211 --i-~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i 287 (358)
+ ...... +..+++++.++.+..+|.+++ +....... .....+... + ..++.++.++.+..
T Consensus 229 ~~~~~~p~~~---~~~v~~~~~~g~l~~~d~~tG---------~~~w~~~~--~~~~~~~~~--~-~~l~~~~~~g~l~~ 291 (376)
T 3q7m_A 229 SDVDTTPVVV---NGVVFALAYNGNLTALDLRSG---------QIMWKREL--GSVNDFIVD--G-NRIYLVDQNDRVMA 291 (376)
T ss_dssp -CCCCCCEEE---TTEEEEECTTSCEEEEETTTC---------CEEEEECC--CCEEEEEEE--T-TEEEEEETTCCEEE
T ss_pred cccCCCcEEE---CCEEEEEecCcEEEEEECCCC---------cEEeeccC--CCCCCceEE--C-CEEEEEcCCCeEEE
Confidence 1 111111 246788888999999999887 44444332 223444443 3 57788888999999
Q ss_pred EecCCCCceeeEecC-CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 288 WDLSNNQPSCIASRN-PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 288 ~d~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
+|..+++. ..... .....+...... +. .++.++.+|.|.++|..+++.+.+.
T Consensus 292 ~d~~tG~~--~w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 292 LTIDGGVT--LWTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp EETTTCCE--EEEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EECCCCcE--EEeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECCCCcEEEEE
Confidence 99999884 33332 111222222222 33 3667888999999999999876543
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.14 E-value=2.6e-08 Score=91.32 Aligned_cols=185 Identities=12% Similarity=0.123 Sum_probs=115.5
Q ss_pred EEEecCCCCCcEEEEEEcCCe-------------------EEEEECCCCceeeeecc--cc-------cceeeEEEcCCC
Q 018293 126 LGLAWNKEFRNILASASADKQ-------------------VKIWDVAAGKCNLTLEH--HT-------DKVQAVAWNHHS 177 (358)
Q Consensus 126 ~~~~~~~~~~~~l~s~~~dg~-------------------v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~ 177 (358)
..++++|+ ..+++.+..++. |..+|.++|+.+..++. |. .++.......++
T Consensus 238 ~~~~~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G 316 (689)
T 1yiq_A 238 DSFAYDPE-LNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDG 316 (689)
T ss_dssp SCEEEETT-TTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred cceeEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCC
Confidence 35678887 457888877763 99999999999887754 21 111112222244
Q ss_pred C--cEEEEEeCCCcEEEEEcccCCCcccee------ee--------------------c-------------CCeeeEEE
Q 018293 178 P--QILLSGSFDRSVVMKDARISTHSGFKW------AV--------------------A-------------ADVESLAW 216 (358)
Q Consensus 178 ~--~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~--------------------~-------------~~i~~~~~ 216 (358)
. ..++.++.+|.++++|.++++.+.... .. . ..-..+++
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~ 396 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSY 396 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEE
T ss_pred cEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceE
Confidence 1 278889999999999999887642110 00 0 00113678
Q ss_pred cCCCCCeEEEEec---------------------------------------------CCeEEEEEcccCCCCCCCCCCC
Q 018293 217 DPHAEHSFVVSLE---------------------------------------------DGTIKGFDIRTAKSDPDSTSQQ 251 (358)
Q Consensus 217 ~~~~~~~~~~~~~---------------------------------------------dg~i~i~d~~~~~~~~~~~~~~ 251 (358)
+|+.+ ++++... +|.|..||+.++ +
T Consensus 397 dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG---------~ 466 (689)
T 1yiq_A 397 NPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ---------Q 466 (689)
T ss_dssp ETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT---------E
T ss_pred CCCCC-EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC---------C
Confidence 88544 5555422 377999999887 5
Q ss_pred ccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEE
Q 018293 252 SSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324 (358)
Q Consensus 252 ~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 324 (358)
.+.....+.. ...-.+...+ .+++.|+.||.++.||.++++.+-..... +...-.-+.|..+|+..+++.
T Consensus 467 ~~W~~~~~~~-~~~g~~~tag-glvf~gt~dg~l~a~D~~tG~~lw~~~~~-~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 467 AAWEVPYVTI-FNGGTLSTAG-NLVFEGSADGRVIAYAADTGEKLWEQPAA-SGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEEEEEESSS-CCCCEEEETT-TEEEEECTTSEEEEEETTTCCEEEEEECS-SCCCSCCEEEEETTEEEEEEE
T ss_pred eEeEccCCCC-ccCccceECC-CEEEEECCCCcEEEEECCCCccceeeeCC-CCcccCceEEEECCEEEEEEE
Confidence 5666655432 3333445555 68899999999999999999853333322 211123366778887544443
No 238
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.14 E-value=8.6e-08 Score=81.59 Aligned_cols=210 Identities=5% Similarity=0.041 Sum_probs=136.7
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 202 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 202 (358)
..+..++|.+.++.++++-...+.|..+++........+.........+++.+.+..++++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 45789999987566666666778999999876654333333334567889988664666666667888888876543322
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEecC-CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 281 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 281 (358)
...........++++|.++.++++-... +.|..+++... .........-...+.|+++|+++.+.++-+.
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---------~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~ 266 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS---------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAK 266 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSCEEEEEEEGGGTEEEEEETT
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC---------CcEEEEECCCCCeeeEEEeCCCCEEEEEECC
Confidence 2222235678999999776566665555 78888887643 2222222223446899999877566666666
Q ss_pred CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 282 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 282 dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
.+.|..+|+.......+ ..........+++. .+ .++++-...+.|..++..+++.+....
T Consensus 267 ~~~I~~~d~dG~~~~~~--~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 267 HHVIERANLDGSHRKAV--ISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTEEEEECTTSCSCEEE--ECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCEEEEEeCCCCeeEEE--EECCCCCceEEEEE-CC-EEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 78899999876543222 22223446678883 33 378877788899999976776655443
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.13 E-value=6.4e-08 Score=80.41 Aligned_cols=255 Identities=9% Similarity=-0.031 Sum_probs=140.8
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+++++|+++.++..++.|..|+..+.... ........... . ...... ..........+..+++.++++. |+
T Consensus 25 ~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~-~---~~~g~~---~~~~~~~~~~p~gi~~~~~~g~-l~ 95 (322)
T 2fp8_A 25 TFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNK-A---FCENST---DAEKRPLCGRTYDISYNLQNNQ-LY 95 (322)
T ss_dssp ECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCH-H---HHTTCC---CGGGHHHHCCEEEEEEETTTTE-EE
T ss_pred EEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccc-c---cccccc---chhccccCCCCceEEEcCCCCc-EE
Confidence 34788988888888999999987643211 10000000000 0 000000 0000011235788999973254 55
Q ss_pred EEEcCCeEEEEECCCCceeeeec----c-cccceeeEEEcC-CCCcEEEEEeC-----------------CCcEEEEEcc
Q 018293 140 SASADKQVKIWDVAAGKCNLTLE----H-HTDKVQAVAWNH-HSPQILLSGSF-----------------DRSVVMKDAR 196 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~~~~~----~-~~~~v~~~~~~~-~~~~~l~~~~~-----------------dg~i~i~d~~ 196 (358)
.+...+.+..+|..+++. ..+. + .......+++.+ +| ++.++... ++.|..+|..
T Consensus 96 v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 555556688888776542 2221 1 113467899999 88 66655432 3678888876
Q ss_pred cCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEE
Q 018293 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 276 (358)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l 276 (358)
+++... ..........++++|++..++++-...+.|..|++..... .....+....+ ...+++.++| ++.
T Consensus 174 ~~~~~~-~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-------~~~~~~~~~~g-P~gi~~d~~G-~l~ 243 (322)
T 2fp8_A 174 TKETTL-LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-------GTAEVLVKIPN-PGNIKRNADG-HFW 243 (322)
T ss_dssp TTEEEE-EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-------TCEEEEEECSS-EEEEEECTTS-CEE
T ss_pred CCEEEE-eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-------CccceEEeCCC-CCCeEECCCC-CEE
Confidence 554322 2222345678999996554555556678999999875321 11111111223 6789999988 665
Q ss_pred EEEeC----------CCcEEEEecCCCCceeeEecCC-C-CceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 277 ATGST----------DKMVKLWDLSNNQPSCIASRNP-K-AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 277 ~~~~~----------dg~i~i~d~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
++... .+.|..+|.. ++......... . ...+..+++ .+++ ++++...++.|..+++...
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~-L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGL-LYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTE-EEEECSSCSEEEEEEC---
T ss_pred EEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCE-EEEeecCCCceEEEecccc
Confidence 55443 4668888874 44322222221 1 234566666 3555 6777777889999998643
No 240
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.11 E-value=2.8e-07 Score=77.24 Aligned_cols=208 Identities=5% Similarity=0.052 Sum_probs=135.9
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 202 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 202 (358)
..+..++|++.++.++++-...+.|..+++........+.........+++.+.++.++++-...+.|.+.++.......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 44789999987565666666778999999876654333332334567889988664666666677889999987544322
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEecC-CeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCCCcEEEEEe
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~~~ 280 (358)
...........++++|.++.++++-... +.|..+++... ....+ ...-...+.++++|+++.+.++-.
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~----------~~~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS----------GRRIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----------SCEESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC----------CcEEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 2222235578999999766666665555 78888887643 11121 122344689999987756666666
Q ss_pred CCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 281 TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 281 ~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
..+.|..+|+.......+. .........+++. .+ .++++-...+.|..++..+++.+...
T Consensus 223 ~~~~I~~~~~dG~~~~~~~--~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 223 KHHVIERANLDGSHRKAVI--SQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTTEEEEEETTSCSCEEEE--CSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCEEEEEeCCCCceEEEE--eCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccCCCccEEe
Confidence 6788999998765432222 2223446677773 34 37777778889999987677655443
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.10 E-value=5.7e-08 Score=82.58 Aligned_cols=223 Identities=7% Similarity=0.033 Sum_probs=130.7
Q ss_pred CceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcC
Q 018293 65 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 144 (358)
Q Consensus 65 ~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 144 (358)
+..+++++.++.|..+|..+++......... ..........++ .. + + .++.+..+
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~------------------~~~~~~~~~~~~----~~-~-~-~v~~g~~~ 197 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDM------------------PSLSLRGESAPT----TA-F-G-AAVVGGDN 197 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----------------------CCCCCCE----EE-T-T-EEEECCTT
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCC------------------CceeecCCCCcE----EE-C-C-EEEEEcCC
Confidence 4577788889999999998766544321100 000000111111 11 2 3 67778889
Q ss_pred CeEEEEECCCCceeeeecccccc----ee---eEEEcC--CCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEE
Q 018293 145 KQVKIWDVAAGKCNLTLEHHTDK----VQ---AVAWNH--HSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLA 215 (358)
Q Consensus 145 g~v~iwd~~~~~~~~~~~~~~~~----v~---~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~ 215 (358)
+.+..+|.++++.+......... +. .+.-.| .+ ..++.++.++.+..+|.++++..... . ......+.
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~v~~~~~~g~l~~~d~~tG~~~w~~-~-~~~~~~~~ 274 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVN-GVVFALAYNGNLTALDLRSGQIMWKR-E-LGSVNDFI 274 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEET-TEEEEECTTSCEEEEETTTCCEEEEE-C-CCCEEEEE
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEEC-CEEEEEecCcEEEEEECCCCcEEeec-c-CCCCCCce
Confidence 99999999999887766422110 00 000111 12 46777888999999999887654311 1 12233444
Q ss_pred EcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee-cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCC
Q 018293 216 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 294 (358)
Q Consensus 216 ~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 294 (358)
.. +..+++++.++.+..+|..++ +....... ....+...... + ..|+.++.+|.+.++|..+++
T Consensus 275 ~~---~~~l~~~~~~g~l~~~d~~tG---------~~~w~~~~~~~~~~~~~~~~--~-~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 275 VD---GNRIYLVDQNDRVMALTIDGG---------VTLWTQSDLLHRLLTSPVLY--N-GNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EE---TTEEEEEETTCCEEEEETTTC---------CEEEEECTTTTSCCCCCEEE--T-TEEEEECTTSEEEEEETTTCC
T ss_pred EE---CCEEEEEcCCCeEEEEECCCC---------cEEEeecccCCCcccCCEEE--C-CEEEEEeCCCeEEEEECCCCc
Confidence 43 347888888999999999887 44444431 12222333333 3 578888999999999999998
Q ss_pred ceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEE
Q 018293 295 PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334 (358)
Q Consensus 295 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~ 334 (358)
........ ...+.......++. |+.++.+|.|+.|+
T Consensus 340 ~~~~~~~~--~~~~~~~~~~~~~~--l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 340 FVAQQKVD--SSGFQTEPVAADGK--LLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEEECC--TTCBCSCCEEETTE--EEEEBTTSCEEEEE
T ss_pred EEEEEecC--CCcceeCCEEECCE--EEEEeCCCEEEEEe
Confidence 54333331 12222111112443 56688899999887
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.10 E-value=3.6e-08 Score=90.15 Aligned_cols=199 Identities=9% Similarity=0.120 Sum_probs=125.6
Q ss_pred EEEecCCCCCcEEEEEEcCC-------------------eEEEEECCCCceeeeecc--cc-------cceeeEEEcCCC
Q 018293 126 LGLAWNKEFRNILASASADK-------------------QVKIWDVAAGKCNLTLEH--HT-------DKVQAVAWNHHS 177 (358)
Q Consensus 126 ~~~~~~~~~~~~l~s~~~dg-------------------~v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~ 177 (358)
..++++|+ ..+++.+..++ .|..+|.++|+.+..++. |. .....+....+|
T Consensus 246 ~~~~~d~~-~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 246 DSMTFDAE-LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp SCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred cceeEcCC-CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 35677888 45777776554 599999999998877653 21 112222333344
Q ss_pred C--cEEEEEeCCCcEEEEEcccCCCccceeeec-----------CCe------------------------eeEEEcCCC
Q 018293 178 P--QILLSGSFDRSVVMKDARISTHSGFKWAVA-----------ADV------------------------ESLAWDPHA 220 (358)
Q Consensus 178 ~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------~~i------------------------~~~~~~~~~ 220 (358)
. ..++.++.+|.++++|.++++.+....... .++ ..++++|+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 2 468889999999999999887643211000 000 156788855
Q ss_pred CCeEEEEec-------------------------------------------CCeEEEEEcccCCCCCCCCCCCccEEEe
Q 018293 221 EHSFVVSLE-------------------------------------------DGTIKGFDIRTAKSDPDSTSQQSSFTLH 257 (358)
Q Consensus 221 ~~~~~~~~~-------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 257 (358)
+ ++++... .|.|..||+.++ +.+....
T Consensus 405 ~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG---------~~~W~~~ 474 (677)
T 1kb0_A 405 G-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ---------KAAWSVE 474 (677)
T ss_dssp T-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT---------EEEEEEE
T ss_pred C-EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC---------cEEeecC
Confidence 4 6665433 277999999887 5555554
Q ss_pred ecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEcc-----------
Q 018293 258 AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS----------- 326 (358)
Q Consensus 258 ~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----------- 326 (358)
. ..++....+...+ .+++.++.||.+++||.++++.+...... +...-.-+.+..+|+..++..+.
T Consensus 475 ~-~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~lw~~~~~-~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~ 551 (677)
T 1kb0_A 475 H-VSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEKLWEAPTG-TGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARA 551 (677)
T ss_dssp E-SSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCEEEEEECS-SCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCS
T ss_pred C-CCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCceeeeeeCC-CCcccCCEEEEeCCEEEEEEeccCCccccccccc
Confidence 3 3344445556666 68888899999999999999854333322 22222335667888744444322
Q ss_pred -----CCeEEEEEccCC
Q 018293 327 -----KGKLEIWDTLSD 338 (358)
Q Consensus 327 -----dg~i~vw~~~~~ 338 (358)
.+.+.+|.+...
T Consensus 552 ~~~~~~~~l~~f~l~~~ 568 (677)
T 1kb0_A 552 TERQGPGTVYTFVVGGK 568 (677)
T ss_dssp CSCCCCCEEEEEEETCB
T ss_pred cccCCCCeEEEEecccc
Confidence 468888988743
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=1.6e-08 Score=80.32 Aligned_cols=191 Identities=9% Similarity=-0.025 Sum_probs=126.5
Q ss_pred ccCCCceEEecCC--CCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEE
Q 018293 61 DREKGNFMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 138 (358)
Q Consensus 61 ~s~~~~~l~~g~~--dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 138 (358)
|++++.++++.+. ++.|+++|..+++......+. .+. ....+++. ++.+.
T Consensus 28 ~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~-------------------------~~~-fgeGi~~~--g~~ly 79 (266)
T 2iwa_A 28 YAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD-------------------------DSY-FGEGLTLL--NEKLY 79 (266)
T ss_dssp ECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC-------------------------TTC-CEEEEEEE--TTEEE
T ss_pred EeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC-------------------------CCc-ceEEEEEe--CCEEE
Confidence 3787765555443 589999999887655433221 111 11234444 34566
Q ss_pred EEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeec-----CCeee
Q 018293 139 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA-----ADVES 213 (358)
Q Consensus 139 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~i~~ 213 (358)
++.-.++.+.++|..+.+.+.++..... ....+++++ ..++++..++.|.++|..+.+......-.. ..++.
T Consensus 80 v~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg-~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 80 QVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDG-KILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp EEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECS-SSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred EEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECC-CEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 6666789999999999999888863311 223455677 445555678999999998876554332111 23567
Q ss_pred EEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec-------------CCceeEEEecCCCCcEEEEEe
Q 018293 214 LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-------------DKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 214 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~-------------~~~i~~i~~~~~~~~~l~~~~ 280 (358)
+.|. + +.+++....++.|.+.|..++ +.+..+... ....+.|+++|++..+++++.
T Consensus 157 le~~-d-g~lyvn~~~~~~V~vID~~tg---------~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 157 LEYI-N-GEVWANIWQTDCIARISAKDG---------TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp EEEE-T-TEEEEEETTSSEEEEEETTTC---------CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred EEEE-C-CEEEEecCCCCeEEEEECCCC---------cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 7777 3 335555556889999999987 555555431 124589999999877888888
Q ss_pred CCCcEEEEecCCC
Q 018293 281 TDKMVKLWDLSNN 293 (358)
Q Consensus 281 ~dg~i~i~d~~~~ 293 (358)
..+.+.+.++...
T Consensus 226 ~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 226 LWPKLFEIKLHLV 238 (266)
T ss_dssp TCSEEEEEEEEEC
T ss_pred CCCeEEEEEEecc
Confidence 8899999888654
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.09 E-value=1e-08 Score=89.78 Aligned_cols=254 Identities=11% Similarity=0.104 Sum_probs=155.5
Q ss_pred EEecCCCCeEEEEEcccccCcCceeecCCcccc-------cccccccCC--------ceec--cccccCCCcccEEEEec
Q 018293 68 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEE-------KKKKKSKKG--------KKSS--IKYKKGSHTDSVLGLAW 130 (358)
Q Consensus 68 l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--------~~~~--~~~~~~~h~~~v~~~~~ 130 (358)
+.+|+..|.++|+-+.+++.+..+.++...+.. .+....... +... ....-..|- -.+++
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh---~~~s~ 94 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHH---VHMSF 94 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCC---EEEEE
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCc---cccCC
Confidence 678999999999999999888776665433221 111110000 0000 010111121 23333
Q ss_pred ---CCCCCcEEEEEEcCCeEEEEECCCCceeeeecc-cccceeeEEE-c-CCCCcEEEEEe------------------C
Q 018293 131 ---NKEFRNILASASADKQVKIWDVAAGKCNLTLEH-HTDKVQAVAW-N-HHSPQILLSGS------------------F 186 (358)
Q Consensus 131 ---~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~~l~~~~------------------~ 186 (358)
.++|+.++++...++.|.+.|+.+.++...+.- ....+..+++ . |++ .++++++ .
T Consensus 95 t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 95 TEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp ETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCC-cEEEEecccccccCCCCccccccccc
Confidence 346454555555567899999999998774431 2345778887 4 888 6666663 3
Q ss_pred CCcEEEEEcccCCCccceeeecCCeeeEEEcCCCCCeEEEEecCC-----------------------------------
Q 018293 187 DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG----------------------------------- 231 (358)
Q Consensus 187 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg----------------------------------- 231 (358)
++.+.+.|..+.+... ..........++++|++. ++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~-qI~Vgg~pd~~~~spdGk-~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAW-QVLVSGNLDNCDADYEGK-WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEEETTTTEEEE-EEEESSCCCCEEECSSSS-EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred CceEEEEECCCCeEEE-EEEeCCCccceEECCCCC-EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 4578899988765443 222333567788999655 555554332
Q ss_pred ---eEEEEEcccCCCCCCCCCCCc-cEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc----------ee
Q 018293 232 ---TIKGFDIRTAKSDPDSTSQQS-SFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP----------SC 297 (358)
Q Consensus 232 ---~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----------~~ 297 (358)
.|.+.|.++.+ ... +..+... ....++.++|||..+++++..+.+|.++|+.+.+. ..
T Consensus 252 ~i~~V~VID~~~~~-------~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 252 ELNGVKVVDGRKEA-------SSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp EETTEEEEECSGGG-------CCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred EECcEEEEeCcccC-------CceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 25555555410 022 3333332 34578999999955566666789999999986421 11
Q ss_pred eEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 298 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
..... -......++|+|+| +++++.-.|+.|.+||+.+
T Consensus 324 ~~~v~-vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 324 VAEPE-LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECCB-CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred EEEcC-CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 22222 23457789999999 6888999999999999987
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.09 E-value=8e-09 Score=86.08 Aligned_cols=188 Identities=12% Similarity=0.061 Sum_probs=120.9
Q ss_pred cEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc
Q 018293 124 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF 203 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 203 (358)
.+.++...++ + .+..++.++.+..+|.+ ++....+......+.++...+++ . +..++ +.+..+| .+++....
T Consensus 138 ~~~~~~~~~~-g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g-~-l~v~t--~~l~~~d-~~g~~~~~ 209 (330)
T 3hxj_A 138 IYATPIVSED-G-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDG-T-IYFGS--DKVYAIN-PDGTEKWN 209 (330)
T ss_dssp CCSCCEECTT-S-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTC-C-EEEES--SSEEEEC-TTSCEEEE
T ss_pred eeeeeEEcCC-C-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCC-E-EEEEe--CEEEEEC-CCCcEEEE
Confidence 3455566656 4 36667788999999988 87776666555667777877776 4 44455 8899999 55443322
Q ss_pred eeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC
Q 018293 204 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 283 (358)
Q Consensus 204 ~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg 283 (358)
.......+.++...+++ .+.+++.++.+..+|.. + .....+......+.++.+.+++ .|..++.+|
T Consensus 210 ~~~~~~~~~~~~~~~~g--~l~v~t~~~gl~~~~~~-g---------~~~~~~~~~~~~~~~~~~~~~g--~l~v~t~~g 275 (330)
T 3hxj_A 210 FYAGYWTVTRPAISEDG--TIYVTSLDGHLYAINPD-G---------TEKWRFKTGKRIESSPVIGNTD--TIYFGSYDG 275 (330)
T ss_dssp ECCSSCCCSCCEECTTS--CEEEEETTTEEEEECTT-S---------CEEEEEECSSCCCSCCEECTTS--CEEEECTTC
T ss_pred EccCCcceeceEECCCC--eEEEEcCCCeEEEECCC-C---------CEeEEeeCCCCccccceEcCCC--eEEEecCCC
Confidence 22233557778887743 57777788888888743 3 3344444444444455565544 567788888
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
.|..+|. +++. ..........+.++...++|. |..++.+|.+++......
T Consensus 276 gl~~~d~-~g~~--~~~~~~~~~~~~~~~~d~~g~--l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 276 HLYAINP-DGTE--KWNFETGSWIIATPVIDENGT--IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp EEEEECT-TSCE--EEEEECSSCCCSCCEECTTCC--EEEECTTSCEEEEEC---
T ss_pred CEEEECC-CCcE--EEEEEcCCccccceEEcCCCE--EEEEcCCCeEEEEecccc
Confidence 8999996 5553 223333344566777778887 445889999998876543
No 246
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.07 E-value=4.7e-07 Score=77.37 Aligned_cols=214 Identities=12% Similarity=0.052 Sum_probs=136.1
Q ss_pred CcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC----ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcc
Q 018293 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG----KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196 (358)
Q Consensus 121 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 196 (358)
....+..++|++.++.++++-...+.|..+++... .....+.........+++.+.+.+++++-...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 34568899999875656666566788999998652 22233332345677899988554666666678889999887
Q ss_pred cCCCccceeeecCCeeeEEEcCCCCCeEEEEec-CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcE
Q 018293 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 275 (358)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 275 (358)
.................++++|.++.++++-.. .+.|...++... .........-...+.|+++++++.+
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~---------~~~~~~~~~l~~P~glavd~~~~~l 260 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---------DIYSLVTENIQWPNGITLDLLSGRL 260 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTEE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC---------ccEEEEECCCCceEEEEEEeCCCEE
Confidence 554333222233457899999966655555423 477888888643 2222222233567899999877555
Q ss_pred EEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 276 LATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 276 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
.++-...+.|..+|+.......+............+++.. ..++.+-...+.|..+|..+++.+....
T Consensus 261 Y~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~--~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 261 YWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET--TEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC--CEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 5665667889999997765434433222233455677733 3477777778899999987777655443
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.05 E-value=7.3e-08 Score=75.58 Aligned_cols=186 Identities=10% Similarity=0.037 Sum_probs=122.9
Q ss_pred EEEEecCCCCCcEEEEEEcCC--eEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc
Q 018293 125 VLGLAWNKEFRNILASASADK--QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 202 (358)
Q Consensus 125 v~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 202 (358)
...+.|+ + +.++.+.+.+| .|+++|+++++.+..+... .........++++.+.+..-.++.+.++|..+.+...
T Consensus 45 tqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 4788888 5 56777777776 8999999999998887643 3333322333443566666678999999999887765
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec--C---CceeEEEecCCCCcEEE
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--D---KAVCTISYNPLVPNLLA 277 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~---~~i~~i~~~~~~~~~l~ 277 (358)
... ....-..++ +++. .++.+..++.|.++|..+. +....+... . ..++.+.|. +| .+.+
T Consensus 122 ti~-~~~eG~glt--~dg~-~L~~SdGs~~i~~iDp~T~---------~v~~~I~V~~~g~~~~~lNELe~~-~G-~lya 186 (262)
T 3nol_A 122 SFN-YDGEGWGLT--HNDQ-YLIMSDGTPVLRFLDPESL---------TPVRTITVTAHGEELPELNELEWV-DG-EIFA 186 (262)
T ss_dssp EEE-CSSCCCCEE--ECSS-CEEECCSSSEEEEECTTTC---------SEEEEEECEETTEECCCEEEEEEE-TT-EEEE
T ss_pred EEE-CCCCceEEe--cCCC-EEEEECCCCeEEEEcCCCC---------eEEEEEEeccCCccccccceeEEE-CC-EEEE
Confidence 332 223333444 4444 4555555788999999886 444444332 2 334567776 45 5555
Q ss_pred EEeCCCcEEEEecCCCCceeeEecCCC----------CceeEEEEEcCCCCeEEEEEccCC
Q 018293 278 TGSTDKMVKLWDLSNNQPSCIASRNPK----------AGAVFSVAFSEDSPFVLAIGGSKG 328 (358)
Q Consensus 278 ~~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l~~~~~dg 328 (358)
..-.++.|.+.|..+++......+.+- ....+.|+|+|+++.++++|-.=-
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp 247 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP 247 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 544688899999999986555554321 235689999999887888775443
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.04 E-value=1.7e-08 Score=92.28 Aligned_cols=243 Identities=10% Similarity=0.078 Sum_probs=140.8
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 143 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 143 (358)
.+..+++++.|+.|..+|..+++.......... .........++. . + + .++.+..
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~------------------~~~~~~~~~P~v----~-~-~-~v~vg~~ 170 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDP------------------AKPYSITGAPRV----V-K-G-KVIIGNG 170 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCT------------------TSSCBCCSCCEE----E-T-T-EEEECCB
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCC------------------CCcceecCCCEE----E-C-C-EEEEeCC
Confidence 356788888899999999988776543221100 000000011111 1 2 3 4444433
Q ss_pred ------CCeEEEEECCCCceeeeecccc-------------------------------cceeeEEEcCCCCcEEEEEeC
Q 018293 144 ------DKQVKIWDVAAGKCNLTLEHHT-------------------------------DKVQAVAWNHHSPQILLSGSF 186 (358)
Q Consensus 144 ------dg~v~iwd~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~~~~~~l~~~~~ 186 (358)
+|.|..+|.++|+.+.++.... .....+++.++. ..++.+..
T Consensus 171 ~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~ 249 (668)
T 1kv9_A 171 GAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTG 249 (668)
T ss_dssp CTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-TEEEEECC
T ss_pred CCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-CEEEEeCC
Confidence 5899999999999887764210 011246777777 67777776
Q ss_pred CC-------------------cEEEEEcccCCCccceeee--c-------CCeeeEEEcCCCC--CeEEEEecCCeEEEE
Q 018293 187 DR-------------------SVVMKDARISTHSGFKWAV--A-------ADVESLAWDPHAE--HSFVVSLEDGTIKGF 236 (358)
Q Consensus 187 dg-------------------~i~i~d~~~~~~~~~~~~~--~-------~~i~~~~~~~~~~--~~~~~~~~dg~i~i~ 236 (358)
++ .|..+|.++++..-..... . .+.....+..++. ..++.++.+|.++++
T Consensus 250 ~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~l 329 (668)
T 1kv9_A 250 NGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVL 329 (668)
T ss_dssp CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEE
Confidence 65 3899999888765432221 1 2222222222222 258888999999999
Q ss_pred EcccCCCCCCCCCCCccEEEeecC------------C------------------------ceeEEEecCCCCcEEEEE-
Q 018293 237 DIRTAKSDPDSTSQQSSFTLHAHD------------K------------------------AVCTISYNPLVPNLLATG- 279 (358)
Q Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~------------~------------------------~i~~i~~~~~~~~~l~~~- 279 (358)
|..+++. +....... . .-..++++|+. .+++..
T Consensus 330 D~~tG~~---------l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~-g~~yv~~ 399 (668)
T 1kv9_A 330 DRTNGKL---------ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT-GLVYIPY 399 (668)
T ss_dssp ETTTCCE---------EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT-TEEEEEE
T ss_pred ECCCCCE---------eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC-CEEEEec
Confidence 9988843 21111000 0 01125677765 344431
Q ss_pred -----------------------------------eCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEE
Q 018293 280 -----------------------------------STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 324 (358)
Q Consensus 280 -----------------------------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 324 (358)
..+|.|..||+.+++.. ...... .+.....+...+. +++.+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~--W~~~~~-~~~~~~~~~t~gg-~vf~g 475 (668)
T 1kv9_A 400 QEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAA--WKVPYP-THWNGGTLSTAGN-LVFQG 475 (668)
T ss_dssp EECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEE--EEEEES-SSCCCCEEEETTT-EEEEE
T ss_pred cccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEE--EEccCC-CCCcCceeEeCCC-EEEEE
Confidence 12478999999998843 222211 2222233444555 57778
Q ss_pred ccCCeEEEEEccCCCccccccc
Q 018293 325 GSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 325 ~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
+.||.++.||..+++.+.+.-.
T Consensus 476 ~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 476 TAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp CTTSEEEEEETTTCCEEEEEEC
T ss_pred CCcccchhhhhhcChhheEecC
Confidence 9999999999999998866543
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.00 E-value=7.6e-08 Score=75.46 Aligned_cols=183 Identities=8% Similarity=-0.012 Sum_probs=123.9
Q ss_pred EEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceee--EEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc
Q 018293 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQA--VAWNHHSPQILLSGSFDRSVVMKDARISTHSG 202 (358)
Q Consensus 125 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 202 (358)
...+.|+. +.++.+.+.+|.|+++|+++++.+..+ - ...... +++ ++..+.+..-.++.+.+||..+.+...
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 46788873 568888888999999999999988877 2 233333 454 444666667789999999999887665
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee--cC---CceeEEEecCCCCcEEE
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA--HD---KAVCTISYNPLVPNLLA 277 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~---~~i~~i~~~~~~~~~l~ 277 (358)
... ....-..+++ ++. .++.+..++.|.++|..+. +....+.. +. ..++.+.|. +| .+.+
T Consensus 131 ti~-~~~eGwGLt~--Dg~-~L~vSdGs~~l~~iDp~T~---------~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lya 195 (268)
T 3nok_A 131 TTR-YSGEGWGLCY--WNG-KLVRSDGGTMLTFHEPDGF---------ALVGAVQVKLRGQPVELINELECA-NG-VIYA 195 (268)
T ss_dssp EEE-CSSCCCCEEE--ETT-EEEEECSSSEEEEECTTTC---------CEEEEEECEETTEECCCEEEEEEE-TT-EEEE
T ss_pred EEe-CCCceeEEec--CCC-EEEEECCCCEEEEEcCCCC---------eEEEEEEeCCCCcccccccccEEe-CC-EEEE
Confidence 333 2333345554 344 6666667899999999886 44444432 22 234667777 45 5555
Q ss_pred EEeCCCcEEEEecCCCCceeeEecC-----------CCCceeEEEEEcCCCCeEEEEEccCC
Q 018293 278 TGSTDKMVKLWDLSNNQPSCIASRN-----------PKAGAVFSVAFSEDSPFVLAIGGSKG 328 (358)
Q Consensus 278 ~~~~dg~i~i~d~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~~l~~~~~dg 328 (358)
..-.+..|.+.|..+++......+. ......+.|+++|+++.++++|-.=-
T Consensus 196 nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp 257 (268)
T 3nok_A 196 NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWP 257 (268)
T ss_dssp EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCS
T ss_pred EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCC
Confidence 4446788999999999854444432 11246789999998877888875433
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.97 E-value=2.5e-06 Score=67.35 Aligned_cols=207 Identities=11% Similarity=0.147 Sum_probs=135.8
Q ss_pred ccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecc-cccceeeEEEcCCCCcEEEEEeCCCcEEEEEc
Q 018293 117 KKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195 (358)
Q Consensus 117 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 195 (358)
.+.+-...+..++|+|+++.++++...++.|...|.. ++.++.+.- .......+++.+++ .++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-QFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-EEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-EEEEEECCCCcEEEEEc
Confidence 3445567899999999866677778888999999987 887777642 12457788998887 66676667788988887
Q ss_pred ccCCCccc--e-------eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe-------ec
Q 018293 196 RISTHSGF--K-------WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-------AH 259 (358)
Q Consensus 196 ~~~~~~~~--~-------~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-------~~ 259 (358)
........ . .........++|+|.++ .++++.+.....+|.+... .. ...+..+. .+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~-~L~va~E~~p~~i~~~~g~-~~-----~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDH-TFWFFKEKNPIEVYKVNGL-LS-----SNELHISKDKALQRQFT 171 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTT-EEEEEEESSSEEEEEEEST-TC-----SSCCEEEECHHHHHTCC
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCC-EEEEEECcCCceEEEEccc-cc-----CCceeeecchhhccccc
Confidence 65543110 1 11234468999999655 5555555555556665521 00 01111111 12
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCC-------CceeEEEEEcCCCCeEEEEEccCCeEEE
Q 018293 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK-------AGAVFSVAFSEDSPFVLAIGGSKGKLEI 332 (358)
Q Consensus 260 ~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~dg~i~v 332 (358)
...+.+++++|..+++++.....+.+.++|.... +.....+..- -..-..|+|.++|+ ++++ ++-+.++.
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~y~ 248 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEPNRFYR 248 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETTTEEEE
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCCceEEE
Confidence 3457899999987677788788888999997654 4445555421 12567899999998 5665 55666766
Q ss_pred EEc
Q 018293 333 WDT 335 (358)
Q Consensus 333 w~~ 335 (358)
+.-
T Consensus 249 f~~ 251 (255)
T 3qqz_A 249 FTP 251 (255)
T ss_dssp EEC
T ss_pred EEe
Confidence 654
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.96 E-value=3.6e-08 Score=82.11 Aligned_cols=180 Identities=10% Similarity=0.009 Sum_probs=118.6
Q ss_pred EEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeeeEEE
Q 018293 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAW 216 (358)
Q Consensus 137 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 216 (358)
.+..++.++.+..+|.+ ++...........+.++...+++ . +..++.++.+..+|.. ++...........+.++..
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 57778888999999988 77766666555556777777666 4 6678888999999988 5443322223345666777
Q ss_pred cCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce
Q 018293 217 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 296 (358)
.+++ .+.+++ +.|..+| .++ ............+.++...+++ .|..++.++.+..+|. +++.
T Consensus 185 d~~g--~l~v~t--~~l~~~d-~~g---------~~~~~~~~~~~~~~~~~~~~~g--~l~v~t~~~gl~~~~~-~g~~- 246 (330)
T 3hxj_A 185 GKDG--TIYFGS--DKVYAIN-PDG---------TEKWNFYAGYWTVTRPAISEDG--TIYVTSLDGHLYAINP-DGTE- 246 (330)
T ss_dssp CTTC--CEEEES--SSEEEEC-TTS---------CEEEEECCSSCCCSCCEECTTS--CEEEEETTTEEEEECT-TSCE-
T ss_pred cCCC--EEEEEe--CEEEEEC-CCC---------cEEEEEccCCcceeceEECCCC--eEEEEcCCCeEEEECC-CCCE-
Confidence 6633 355665 7899999 554 4445555555667888888765 4566777888888885 3432
Q ss_pred eeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 297 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 297 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
..........+..+...+++. +..++.+|.|..+|. +++.+.
T Consensus 247 -~~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g~~~~ 288 (330)
T 3hxj_A 247 -KWRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DGTEKW 288 (330)
T ss_dssp -EEEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TSCEEE
T ss_pred -eEEeeCCCCccccceEcCCCe--EEEecCCCCEEEECC-CCcEEE
Confidence 223322233344456666776 455788888999995 555443
No 252
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.96 E-value=1.6e-06 Score=71.56 Aligned_cols=210 Identities=9% Similarity=0.074 Sum_probs=134.5
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCcee-eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN-LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS 201 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 201 (358)
..+.+++|.+.++.++.+-...+.|..+++..+... ..+...-.....+++.+.++.++++-...+.|.++++......
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 456789999875666666667789999998765322 2222222456788898766466666667788999998754332
Q ss_pred cceeeecCCeeeEEEcCCCCCeEEEEe-cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe
Q 018293 202 GFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 202 ~~~~~~~~~i~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 280 (358)
............++++|.++.++++-. ..+.|..+++... .........-...+.++++|+++.+.++-+
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---------~~~~~~~~~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS---------SRFIIINSEIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC---------CeEEEEECCCCCccEEEEeccCCEEEEEEC
Confidence 222233356788999986664444442 3578888887643 111112222344689999997756666666
Q ss_pred CCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 281 TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 281 ~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
..+.|..+|+.......+. .........+++..+ .++.+-...+.|..++..+++......
T Consensus 186 ~~~~I~~~d~dG~~~~~~~--~~~~~~P~glav~~~--~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 186 KLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TTTEEEEEETTSCSCEEEE--CSCCSCEEEEEEETT--EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCEEEEEcCCCCceEEEe--cCCCCCceEEEEeCC--EEEEEecCCCeEEEEECCCCCceEEEe
Confidence 6788999998765432222 222344567777543 367777778899999998887655443
No 253
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.95 E-value=1.8e-07 Score=85.51 Aligned_cols=276 Identities=10% Similarity=-0.006 Sum_probs=142.0
Q ss_pred ccC-CCcEEEEEEecCCC------ceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCC-C
Q 018293 3 INP-NDAVIVCARNEDDV------SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM-E 74 (358)
Q Consensus 3 ~~p-~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-d 74 (358)
+.| ++.+++.|....+. ..-.+++|+.....-..+.. ...+....|. +..+..+++++++|+. +
T Consensus 193 v~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~---~~~~~~~~~~-----~~~~~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 193 IEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV---TVTKHDMFCP-----GISMDGNGQIVVTGGNDA 264 (656)
T ss_dssp EETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE---EECSCCCSSC-----EEEECTTSCEEEECSSST
T ss_pred EEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc---cCCCCCCccc-----cccCCCCCCEEEeCCCCC
Confidence 456 78888888654321 23468889887653222211 1111111121 1233578999999984 4
Q ss_pred CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE-cC-----CeEE
Q 018293 75 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-AD-----KQVK 148 (358)
Q Consensus 75 g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~d-----g~v~ 148 (358)
+.+.+||..+.+-.. ...+...... .++...++ +++++.|+ .+ ..+.
T Consensus 265 ~~v~~yd~~t~~W~~-------------------------~~~~~~~R~~-~s~~~~~d-g~iyv~GG~~~~~~~~~~~e 317 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIP-------------------------GPDMQVARGY-QSSATMSD-GRVFTIGGSWSGGVFEKNGE 317 (656)
T ss_dssp TCEEEEEGGGTEEEE-------------------------CCCCSSCCSS-CEEEECTT-SCEEEECCCCCSSSCCCCEE
T ss_pred CceEEecCcCCceeE-------------------------CCCCCccccc-cceEEecC-CeEEEEeCcccCCcccccce
Confidence 689999987532111 0011111111 23334456 56777887 34 5699
Q ss_pred EEECCCCceeeee----cccccceeeEEEcCCCCcEEEEEeCCC---------cEEEEEcccCCCccceeeec-------
Q 018293 149 IWDVAAGKCNLTL----EHHTDKVQAVAWNHHSPQILLSGSFDR---------SVVMKDARISTHSGFKWAVA------- 208 (358)
Q Consensus 149 iwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~------- 208 (358)
+||..+.+....- ......-....+..++ ..++.++.+| .+..||..+...........
T Consensus 318 ~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~-~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 396 (656)
T 1k3i_A 318 VYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDN-HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAP 396 (656)
T ss_dssp EEETTTTEEEEETTSCSGGGCCCCTTGGGTTTC-SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECC
T ss_pred EeCCCCCcceeCCCccccccccccccceeecCC-ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCC
Confidence 9999877533210 0000000001122334 4555665554 45678877654222111111
Q ss_pred --CCeeeEEEcCCCCCeEEEEecCC-----------eEEEEEcccCCCCCCCCCCCccEEEe---ecC-CceeEEEecCC
Q 018293 209 --ADVESLAWDPHAEHSFVVSLEDG-----------TIKGFDIRTAKSDPDSTSQQSSFTLH---AHD-KAVCTISYNPL 271 (358)
Q Consensus 209 --~~i~~~~~~~~~~~~~~~~~~dg-----------~i~i~d~~~~~~~~~~~~~~~~~~~~---~~~-~~i~~i~~~~~ 271 (358)
..-.++.+...++.+++.|+.++ .+.+||..+.. ..... ... ..-.+.+..|+
T Consensus 397 ~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~----------W~~~~~~~mp~~R~~~~~~~l~~ 466 (656)
T 1k3i_A 397 DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP----------NTVFASNGLYFARTFHTSVVLPD 466 (656)
T ss_dssp CCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC----------EEEECTTCCSSCCBSCEEEECTT
T ss_pred CCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC----------eeEEccCCCCCCcccCCeEECCC
Confidence 12234444444566777877542 57777776541 11111 111 12234556677
Q ss_pred CCcEEEEEeCC-----------CcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEcc
Q 018293 272 VPNLLATGSTD-----------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS 326 (358)
Q Consensus 272 ~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 326 (358)
+ ++++.|+.+ ..+.+||..+.+...+..............+.|+|+ +++.|+.
T Consensus 467 g-~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~-v~v~GG~ 530 (656)
T 1k3i_A 467 G-STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGR-VFNGGGG 530 (656)
T ss_dssp S-CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSC-EEEEECC
T ss_pred C-CEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcE-EEecCCC
Confidence 7 788888754 458999998876433222222222233455678998 6888874
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.94 E-value=1.4e-06 Score=71.70 Aligned_cols=223 Identities=13% Similarity=0.086 Sum_probs=129.6
Q ss_pred cccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 60 KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 60 ~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+++++|+++++-..++.|..||.+... .. .. .....+..+++.+++ ++++
T Consensus 38 a~~~~g~lyv~d~~~~~I~~~d~~g~~--~~------------------------~~---~~~~~p~gia~~~dG-~l~v 87 (306)
T 2p4o_A 38 ASAPDGTIFVTNHEVGEIVSITPDGNQ--QI------------------------HA---TVEGKVSGLAFTSNG-DLVA 87 (306)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCCE--EE------------------------EE---ECSSEEEEEEECTTS-CEEE
T ss_pred EECCCCCEEEEeCCCCeEEEECCCCce--EE------------------------EE---eCCCCceeEEEcCCC-cEEE
Confidence 348899888887788999988875311 00 00 012358899999994 4555
Q ss_pred EEEcC-C-eEEEEECCCCceeeeecc-cccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC-cc---------ceee
Q 018293 140 SASAD-K-QVKIWDVAAGKCNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH-SG---------FKWA 206 (358)
Q Consensus 140 s~~~d-g-~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~---------~~~~ 206 (358)
+.... + .|..+|..+++....... .......++..+++ ..+++-..++.|..+|...+.. .. ....
T Consensus 88 ad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~ 166 (306)
T 2p4o_A 88 TGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSES 166 (306)
T ss_dssp EEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTC
T ss_pred EeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccC
Confidence 54332 2 477777777765332221 12223445555544 4455444688888888764311 00 0000
Q ss_pred ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEccc-CCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcE
Q 018293 207 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT-AKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 285 (358)
Q Consensus 207 ~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i 285 (358)
.-.....+ +++++.++++-...+.|..||+.. +.. .....+.. ......+++.++| +++++....+.|
T Consensus 167 ~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~-------~~~~~~~~-~~~P~gi~vd~dG-~l~va~~~~~~V 235 (306)
T 2p4o_A 167 VFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKP-------GEPEIFVE-QTNIDDFAFDVEG-NLYGATHIYNSV 235 (306)
T ss_dssp CSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCB-------CCCEEEEE-SCCCSSEEEBTTC-CEEEECBTTCCE
T ss_pred CCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCC-------CccEEEec-cCCCCCeEECCCC-CEEEEeCCCCeE
Confidence 11123444 676655666666788999999875 211 11112211 1345778999998 777776667889
Q ss_pred EEEecCCCCceeeEecCCCCceeEEEEEc---CCCCeEEEEEc
Q 018293 286 KLWDLSNNQPSCIASRNPKAGAVFSVAFS---EDSPFVLAIGG 325 (358)
Q Consensus 286 ~i~d~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~l~~~~ 325 (358)
.++|.. ++...+..........++++|. |++..++++..
T Consensus 236 ~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 236 VRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 999975 4432222333223457899998 88876666654
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.94 E-value=6.6e-07 Score=69.57 Aligned_cols=189 Identities=12% Similarity=0.055 Sum_probs=122.6
Q ss_pred ccEEEEecCCCCCcEEEEEEcC--CeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC
Q 018293 123 DSVLGLAWNKEFRNILASASAD--KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 200 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 200 (358)
.-...+.|++ +.++.+.+.+ ..|+.+|+++++.+..+.... ..........++++.+..-.++.+.++|..+.+.
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 3466888986 3566666665 489999999999988776332 2222222223436666677899999999988776
Q ss_pred ccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec--C---CceeEEEecCCCCcE
Q 018293 201 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--D---KAVCTISYNPLVPNL 275 (358)
Q Consensus 201 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~---~~i~~i~~~~~~~~~ 275 (358)
..... ....-..++ +++. .++.+..++.|.++|..+. +....+... . ..++.+.+. +| .+
T Consensus 98 ~~ti~-~~~~Gwglt--~dg~-~L~vSdgs~~l~~iDp~t~---------~~~~~I~V~~~g~~~~~lNeLe~~-~G-~l 162 (243)
T 3mbr_X 98 RARFR-YPGEGWALT--SDDS-HLYMSDGTAVIRKLDPDTL---------QQVGSIKVTAGGRPLDNLNELEWV-NG-EL 162 (243)
T ss_dssp EEEEE-CSSCCCEEE--ECSS-CEEEECSSSEEEEECTTTC---------CEEEEEECEETTEECCCEEEEEEE-TT-EE
T ss_pred EEEEe-CCCCceEEe--eCCC-EEEEECCCCeEEEEeCCCC---------eEEEEEEEccCCcccccceeeEEe-CC-EE
Confidence 65332 223334554 4344 5555566889999999886 444444332 1 245666766 34 55
Q ss_pred EEEEeCCCcEEEEecCCCCceeeEecCC-----------CCceeEEEEEcCCCCeEEEEEccCCe
Q 018293 276 LATGSTDKMVKLWDLSNNQPSCIASRNP-----------KAGAVFSVAFSEDSPFVLAIGGSKGK 329 (358)
Q Consensus 276 l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~l~~~~~dg~ 329 (358)
.+..-.+..|.+.|..+++......+.+ .....+.|+++|++..++++|-.=-.
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~ 227 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPM 227 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSE
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCc
Confidence 5444457789999999998554444321 22467899999988878888765443
No 256
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.90 E-value=3.3e-06 Score=78.00 Aligned_cols=212 Identities=12% Similarity=0.064 Sum_probs=135.0
Q ss_pred cccEEEEecCCCCCcEEEEEEcCCeEEEEECCCC----ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEccc
Q 018293 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAG----KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 197 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 197 (358)
...+..|+|.+..+.++++-...+.|..+++... .....+.........|++.+.+.+++++-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 4567889999865656666666788999988753 222333323455678999887756666667788999999875
Q ss_pred CCCccceeeecCCeeeEEEcCCCCCeEEEEecC-CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEE
Q 018293 198 STHSGFKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 276 (358)
Q Consensus 198 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l 276 (358)
................|+++|.++.++++-... +.|...++... .....+...-...+.|++.+.++.++
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~---------~~~~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---------DIYSLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------CEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC---------ceEEEEeCCCCCceEEEEecCCCeEE
Confidence 543332222334588999999666555554333 77888888643 22222222335678999998774555
Q ss_pred EEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 277 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 277 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
++-...+.|..+++.......+......-.....|++..+ +++++-...+.|...+..+++.+...
T Consensus 574 waD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~--~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 574 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT--EEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC--EEEEEECCCCEEEEEeCCCCcceEEe
Confidence 5555667899999977654444332222233456666433 47777777889999988777665544
No 257
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.86 E-value=7.9e-07 Score=82.52 Aligned_cols=238 Identities=11% Similarity=-0.001 Sum_probs=125.4
Q ss_pred Ccccc-CCCceEEecC-----CCCeEEEEEcccc-cCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEec
Q 018293 58 PLKDR-EKGNFMAVGS-----MEPAIEIWDLDVI-DEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAW 130 (358)
Q Consensus 58 ~~~~s-~~~~~l~~g~-----~dg~i~vw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 130 (358)
+++|| |||++||.+. ....|+++|+.++ +.+.. .+ ......++|
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--------------------------~~---~~~~~~~~W 228 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--------------------------KV---SGTNGEIVW 228 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--------------------------CE---EEECSCCEE
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--------------------------cc---cCceeeEEE
Confidence 34569 9999988543 2236999999876 42110 00 112346889
Q ss_pred CCCCCcEEEEEEcC-----CeEEEEECCCCcee--eeec-ccccceeeEEEcCCCCcEEEEEe-C--CCcEEEEEcccCC
Q 018293 131 NKEFRNILASASAD-----KQVKIWDVAAGKCN--LTLE-HHTDKVQAVAWNHHSPQILLSGS-F--DRSVVMKDARIST 199 (358)
Q Consensus 131 ~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~l~~~~-~--dg~i~i~d~~~~~ 199 (358)
+|++. .|+....| ..|.++++.+++.. ..+. ........+.|+|++ ++|+... . ...|.++|+.++.
T Consensus 229 spDg~-~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~l~~~d~~~~~ 306 (751)
T 2xe4_A 229 GPDHT-SLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADT-NTLCIGSQSPETAEVHLLDLRKGN 306 (751)
T ss_dssp CSSTT-EEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTS-SEEEEEEECSSCEEEEEEESSSCT
T ss_pred ecCCC-EEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCC-CEEEEEecCCCCceEEEEECCCCC
Confidence 99954 55555554 36888888776422 2222 222345678999999 5555443 2 3467888887652
Q ss_pred --C--ccceeeecCCeeeEEEcCCCCCeEEEEecC----CeEEEEEcccCCCCCCCCCCCccEE-EeecCC--ceeEEEe
Q 018293 200 --H--SGFKWAVAADVESLAWDPHAEHSFVVSLED----GTIKGFDIRTAKSDPDSTSQQSSFT-LHAHDK--AVCTISY 268 (358)
Q Consensus 200 --~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~i~~ 268 (358)
. .............+.|+. ++.+++.+..+ ..|..+|+.+. ..... +..+.. .+..+.+
T Consensus 307 ~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~---------~~~~~~li~~~~~~~l~~~~~ 376 (751)
T 2xe4_A 307 AHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP---------SDWSHVLVDHSEDVFMESIAV 376 (751)
T ss_dssp TCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTST---------TCCCCEEECCCSSEEEEEEEE
T ss_pred CCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc---------ccceeeEECCCCCcEEEEEEE
Confidence 2 111122234445555544 55455555544 25666666532 11111 222322 3455555
Q ss_pred cCCCCcEEEEEeCCCc--EEEEec-------CCCCceeeEecCCCCceeEEEEE----cCCCCeEEEEEccC---CeEEE
Q 018293 269 NPLVPNLLATGSTDKM--VKLWDL-------SNNQPSCIASRNPKAGAVFSVAF----SEDSPFVLAIGGSK---GKLEI 332 (358)
Q Consensus 269 ~~~~~~~l~~~~~dg~--i~i~d~-------~~~~~~~~~~~~~~~~~v~~~~~----~~~~~~~l~~~~~d---g~i~v 332 (358)
. +..++++...++. |.++++ .+++......+... ..+..+.+ ++++..++++.+.. +.+..
T Consensus 377 ~--~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~-~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~ 453 (751)
T 2xe4_A 377 R--SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEP-IFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFD 453 (751)
T ss_dssp C--SSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCS-SCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEE
T ss_pred E--CCEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCc-eeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEE
Confidence 4 4467777777886 455564 33330111122221 22334433 34665455555443 35777
Q ss_pred EEccCCC
Q 018293 333 WDTLSDA 339 (358)
Q Consensus 333 w~~~~~~ 339 (358)
+|+.+++
T Consensus 454 ~d~~~~~ 460 (751)
T 2xe4_A 454 VSPQDHS 460 (751)
T ss_dssp ECTTTCC
T ss_pred EECCCCc
Confidence 7877654
No 258
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.85 E-value=9.9e-08 Score=74.84 Aligned_cols=175 Identities=14% Similarity=0.129 Sum_probs=109.9
Q ss_pred cCCCceEEecCCCC--eEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 62 REKGNFMAVGSMEP--AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 62 s~~~~~l~~g~~dg--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
+ ++.++.+.+.+| .|+++|+.+++......+. .+ .---.++.. ++.+.+
T Consensus 51 ~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-------------------------~~-~FgeGit~~--g~~ly~ 101 (262)
T 3nol_A 51 R-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-------------------------KR-YFGEGISDW--KDKIVG 101 (262)
T ss_dssp E-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-------------------------TT-CCEEEEEEE--TTEEEE
T ss_pred E-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-------------------------Cc-cceeEEEEe--CCEEEE
Confidence 5 666777777666 8999999887665533221 11 011123332 344555
Q ss_pred EEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeee--c---CCeeeE
Q 018293 140 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV--A---ADVESL 214 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~i~~~ 214 (358)
+...++.+.+||.++.+.+.++.... .-..++ +++ ..|+.+..++.|.++|..+.+......-. . ..++.+
T Consensus 102 ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~glt--~dg-~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNEL 177 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQVRSFNYDG-EGWGLT--HND-QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNEL 177 (262)
T ss_dssp EESSSSEEEEEETTTCCEEEEEECSS-CCCCEE--ECS-SCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEE
T ss_pred EEeeCCEEEEEECccCcEEEEEECCC-CceEEe--cCC-CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccccccee
Confidence 55678999999999999999887433 223444 566 44555556788999999887765432221 1 334557
Q ss_pred EEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec------------CCceeEEEecCCCCcEEEEEe
Q 018293 215 AWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH------------DKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~------------~~~i~~i~~~~~~~~~l~~~~ 280 (358)
.|. ++.+++..-.++.|.+.|.+++ +.+..+... ..-.+.|+++|++..+++||-
T Consensus 178 e~~--~G~lyan~w~~~~I~vIDp~tG---------~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 178 EWV--DGEIFANVWQTNKIVRIDPETG---------KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEE--TTEEEEEETTSSEEEEECTTTC---------BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEE--CCEEEEEEccCCeEEEEECCCC---------cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 776 3445555556889999999987 444443321 234689999998855666653
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.85 E-value=5.2e-07 Score=80.80 Aligned_cols=242 Identities=10% Similarity=0.015 Sum_probs=135.7
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 143 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 143 (358)
.+..+++++.|+.|..+|..+++.......... .........++ .. + + .++.++.
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~------------------~~~~~~~~~P~----v~-~-g-~v~vg~~ 168 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDP------------------KVGSTLTQAPF----VA-K-D-TVLMGCS 168 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCCG------------------GGTCBCCSCCE----EE-T-T-EEEEECB
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCC------------------CccceeccCCE----EE-C-C-EEEEEec
Confidence 356788888899999999988766543221100 00000011111 11 2 3 4555554
Q ss_pred ------CCeEEEEECCCCceeeeecccccc--------------------------------------eeeEEEcCCCCc
Q 018293 144 ------DKQVKIWDVAAGKCNLTLEHHTDK--------------------------------------VQAVAWNHHSPQ 179 (358)
Q Consensus 144 ------dg~v~iwd~~~~~~~~~~~~~~~~--------------------------------------v~~~~~~~~~~~ 179 (358)
++.|..+|.++|+.+.++...... ...+++.++. .
T Consensus 169 ~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-g 247 (571)
T 2ad6_A 169 GAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-N 247 (571)
T ss_dssp CGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT-T
T ss_pred CCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC-C
Confidence 789999999999988766532111 0124566655 4
Q ss_pred EEEEEeCC----------------CcEEEEEcccCCCccceeeec---------CCeeeEEEcCCCC--CeEEEEecCCe
Q 018293 180 ILLSGSFD----------------RSVVMKDARISTHSGFKWAVA---------ADVESLAWDPHAE--HSFVVSLEDGT 232 (358)
Q Consensus 180 ~l~~~~~d----------------g~i~i~d~~~~~~~~~~~~~~---------~~i~~~~~~~~~~--~~~~~~~~dg~ 232 (358)
.++.+..+ +.|..+|.++++..-...... ....-+....++. ..++.++.+|.
T Consensus 248 ~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~ 327 (571)
T 2ad6_A 248 LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGI 327 (571)
T ss_dssp EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSE
T ss_pred eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcE
Confidence 55555432 358889998877643222110 0111112112232 35677888999
Q ss_pred EEEEEcccCCCCCCCCCCCccEEEeecC-------------Cce--------------------------eEEEecCCCC
Q 018293 233 IKGFDIRTAKSDPDSTSQQSSFTLHAHD-------------KAV--------------------------CTISYNPLVP 273 (358)
Q Consensus 233 i~i~d~~~~~~~~~~~~~~~~~~~~~~~-------------~~i--------------------------~~i~~~~~~~ 273 (358)
+.++|..+++. +....... .++ ..++++|+.
T Consensus 328 l~~lD~~tG~~---------~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~- 397 (571)
T 2ad6_A 328 LYTLNRENGNL---------IVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES- 397 (571)
T ss_dssp EEEEETTTCCE---------EEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT-
T ss_pred EEEEECCCCCE---------EeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC-
Confidence 99999988742 22221100 011 245677776
Q ss_pred cEEEEEe-------------------------------------CCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCC
Q 018293 274 NLLATGS-------------------------------------TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 316 (358)
Q Consensus 274 ~~l~~~~-------------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 316 (358)
.++++.. .+|.|..||..+++..-..... ..+....+...
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~---~~~~~~~~~t~ 474 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK---FAAWGGTLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES---SCCCSBCEEET
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC---CCccceeEEEC
Confidence 4555443 3478999999988743222222 12222222333
Q ss_pred CCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 317 SPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 317 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
+. +++.++.||.|+.||..+++.+.+.-
T Consensus 475 gg-~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 475 GG-LVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp TT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CC-EEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 44 45668999999999999999886644
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.84 E-value=1e-05 Score=75.08 Aligned_cols=244 Identities=7% Similarity=-0.033 Sum_probs=127.7
Q ss_pred ccc-CCCcEEEEEEecCCCceEEEEEEeccCC-CCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCC-----
Q 018293 2 TIN-PNDAVIVCARNEDDVSHLEVYILEESDG-GDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME----- 74 (358)
Q Consensus 2 ~~~-p~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d----- 74 (358)
.+| |+|+.|+.+...+....-++|+++...+ .... . .+.+....+.|+|||+.|+....|
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~----~---------~~~~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA----D---------KVSGTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC----C---------CEEEECSCCEECSSTTEEEEEEECTTCCE
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC----c---------cccCceeeEEEecCCCEEEEEEECCCCCC
Confidence 579 9999999886654223456899988764 3110 0 111222345569999888776654
Q ss_pred CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE-c--CCeEEEEE
Q 018293 75 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-A--DKQVKIWD 151 (358)
Q Consensus 75 g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~--dg~v~iwd 151 (358)
..|+++++.+....... +.. .........+.|+|++. +|+..+ . ...|.++|
T Consensus 247 ~~v~~~~lgt~~~~~~l-----------------------v~~-~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~d 301 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVC-----------------------LYE-EHNPLFSAFMYKAADTN-TLCIGSQSPETAEVHLLD 301 (751)
T ss_dssp EEEEEEETTSCGGGCEE-----------------------EEE-CCCTTCEEEEEECTTSS-EEEEEEECSSCEEEEEEE
T ss_pred CEEEEEECCCCchhcEE-----------------------EEe-cCCCceEEEEEECCCCC-EEEEEecCCCCceEEEEE
Confidence 25777777543211100 000 01223456789999955 554443 2 34688889
Q ss_pred CCCCc--e--eeeecccccceeeEEEcCCCCcEEEEEeCC--C--cEEEEEcccCCCccc-eeeecC--CeeeEEEcCCC
Q 018293 152 VAAGK--C--NLTLEHHTDKVQAVAWNHHSPQILLSGSFD--R--SVVMKDARISTHSGF-KWAVAA--DVESLAWDPHA 220 (358)
Q Consensus 152 ~~~~~--~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--g--~i~i~d~~~~~~~~~-~~~~~~--~i~~~~~~~~~ 220 (358)
+.++. . ............++.|+..+ .+++.+..+ + .|..+|+.+...... ...+.. .+..+.+. +
T Consensus 302 ~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~-~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~ 378 (751)
T 2xe4_A 302 LRKGNAHNTLEIVRPREKGVRYDVQMHGTS-HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--S 378 (751)
T ss_dssp SSSCTTCCCEEESSCCCTTCCEEEEEETTT-EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--S
T ss_pred CCCCCCCceeEEeecCCCCceEEEeeeeCC-EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--C
Confidence 87752 2 22223334455566655433 555565554 3 566666654222122 222332 34455554 4
Q ss_pred CCeEEEEecCCeEEE--EEc-------ccCCCCCCCCCCCccEEEeec-CCceeEEEe----cCCCCcEEEEEeCC---C
Q 018293 221 EHSFVVSLEDGTIKG--FDI-------RTAKSDPDSTSQQSSFTLHAH-DKAVCTISY----NPLVPNLLATGSTD---K 283 (358)
Q Consensus 221 ~~~~~~~~~dg~i~i--~d~-------~~~~~~~~~~~~~~~~~~~~~-~~~i~~i~~----~~~~~~~l~~~~~d---g 283 (358)
+.++++...++..++ +|+ ..+ .....+... ...+..+.+ ++++..++++.+.. .
T Consensus 379 ~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g---------~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~ 449 (751)
T 2xe4_A 379 NYLVVAGRRAGLTRIWTMMADSQDGVFKAG---------TGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPN 449 (751)
T ss_dssp SEEEEEEEETTEEEEEEEECCTTTSCCCTT---------TCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEE
T ss_pred CEEEEEEEeCCEEEEEEEecccccccccCC---------ccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCC
Confidence 557777788886554 454 111 102222111 122334433 34554566665543 3
Q ss_pred cEEEEecCCCCc
Q 018293 284 MVKLWDLSNNQP 295 (358)
Q Consensus 284 ~i~i~d~~~~~~ 295 (358)
.+..+|+.+++.
T Consensus 450 ~~~~~d~~~~~~ 461 (751)
T 2xe4_A 450 TWFDVSPQDHSR 461 (751)
T ss_dssp EEEEECTTTCCE
T ss_pred EEEEEECCCCcE
Confidence 477788877664
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.82 E-value=9.3e-07 Score=79.18 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=37.5
Q ss_pred CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 282 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 282 dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
+|.|..||+.+++..-..... .+...-.+...+. +++.++.||.|+.||.++|+.+-+.
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagg-~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER---FAVWGGTMATAGD-LVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES---SCCCSBCEEETTT-EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCeEEEEECCCCCEEeEecCC---CCccCcceEecCC-EEEEECCCCeEEEEECCCCCEEEEe
Confidence 477888999888742222211 1111111222344 4666899999999999999988664
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.82 E-value=5.6e-06 Score=69.36 Aligned_cols=198 Identities=11% Similarity=0.017 Sum_probs=128.5
Q ss_pred EEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce
Q 018293 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 204 (358)
Q Consensus 125 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 204 (358)
-+|.+..++ . +|+.+ ....|+..++........+.. ...+..++|++.+..++++-...+.|..+++.........
T Consensus 36 ~~C~~~~~~-~-~ll~~-~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 36 RSCKALGPE-P-VLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp SCEEESSSC-C-EEEEE-CBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CcccccccC-c-eeEee-cccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 456666664 4 33333 345688888876554444443 3457899999876455666567788999998765433222
Q ss_pred eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC-C
Q 018293 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD-K 283 (358)
Q Consensus 205 ~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-g 283 (358)
.........+++++.+++++++-...+.|.+.++... .....+...-.....+++.|.++.++++-... +
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---------~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~ 182 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---------HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTP 182 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---------SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSC
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC---------ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCC
Confidence 2222456788998866767777777889999998754 22222222334568999999764566665555 7
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
.|..+++.......+ ....-.....++++|++..++++-...+.|..+++..
T Consensus 183 ~I~r~~~dG~~~~~~--~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 183 RIEASSMDGSGRRII--ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEEEETTSCSCEES--CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEEeCCCCCcEEE--EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 899998876542211 2222345788999987776777777788999999864
No 263
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.79 E-value=9.6e-06 Score=66.94 Aligned_cols=182 Identities=11% Similarity=0.009 Sum_probs=117.5
Q ss_pred CCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC---CCccceee-ecCCeeeEEEcCC
Q 018293 144 DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS---THSGFKWA-VAADVESLAWDPH 219 (358)
Q Consensus 144 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~-~~~~i~~~~~~~~ 219 (358)
...|+..|+.+.+....+.. ...+..++|++.+..++++-..++.|..+++... ........ .......+++++.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp BSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 35689999987765554443 3457899999876466666666789999998762 22111111 2245678899876
Q ss_pred CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC-CcEEEEecCCCCceee
Q 018293 220 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD-KMVKLWDLSNNQPSCI 298 (358)
Q Consensus 220 ~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~ 298 (358)
+++++++-...+.|.++|+... .....+.........+++.|.++.++++.... +.|..+++.......+
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~---------~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~ 158 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGV---------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 158 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSS---------SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred CCeEEEEECCCCEEEEEeCCCC---------ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEE
Confidence 6666677677889999998643 22222222334568999999764555554433 6788888865442111
Q ss_pred EecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 299 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 299 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
....-.....+++++++..++++-...+.|..+|+..
T Consensus 159 --~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 159 --VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp --ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred --EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 1222345788999998776777777778999999864
No 264
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.79 E-value=5.6e-08 Score=89.04 Aligned_cols=211 Identities=12% Similarity=0.067 Sum_probs=127.3
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCC----CceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAA----GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 198 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 198 (358)
..+..++|.+.++.++++-...+.|..+++.. ......+.........|++.+.+..++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 34668899887455555555668899999875 22222222222345678888655466666566788999998754
Q ss_pred CCccceeeecCCeeeEEEcCCCCCeEEEEecC-CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEE
Q 018293 199 THSGFKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 277 (358)
Q Consensus 199 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~ 277 (358)
...............++++|.++.++++-... +.|..+++... .........-...+.|+++|+++.+++
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~---------~~~~l~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---------DIYSLVTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC---------CCCEESCSSCSSCCCEEECTTTCCEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC---------CeeEEEeCCCCCccEEEEeccCCEEEE
Confidence 33221112234567889999766566554333 67877777543 111111112234578999998757777
Q ss_pred EEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 278 TGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 278 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
+-+..+.|.++++.......+............|++..+ .++++....+.|..++..+++.+..+
T Consensus 557 aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 557 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred EecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 777778899999976543222221111222344566544 47777777889999998777655443
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.77 E-value=5.5e-05 Score=70.92 Aligned_cols=197 Identities=10% Similarity=0.126 Sum_probs=128.5
Q ss_pred cccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeec-------ccccceeeEEEcCCCCcEEEEEeCCCcEEEEE
Q 018293 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE-------HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 194 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 194 (358)
...|.++...++|. |..|+.+ -|.+||..+++...... -....|.++...++| . +..|+.++-|..++
T Consensus 262 ~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~-lWigt~~~Gl~~~~ 336 (795)
T 4a2l_A 262 SNYIRSLAMDSQNR--LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG-G-MWLGTYFGGLNYYH 336 (795)
T ss_dssp CSBEEEEEECTTSC--EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS-C-EEEEESSSCEEEEC
T ss_pred CCeEEEEEEcCCCC--EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc-C-EEEEECCCCeEEeC
Confidence 35799999988843 4445555 58899987765433221 123578999988887 4 66778888899998
Q ss_pred cccCCCcccee------eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe---------ec
Q 018293 195 ARISTHSGFKW------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---------AH 259 (358)
Q Consensus 195 ~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---------~~ 259 (358)
........... .....|.++..++++ .+.+|+.++-|..||..+.. ...+. ..
T Consensus 337 ~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g--~lWiGt~~~Gl~~~~~~~~~----------~~~~~~~~~~~~~~l~ 404 (795)
T 4a2l_A 337 PIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK--NLWIGTNDGGLNLYNPITQR----------FTSYTLQEDESARGIG 404 (795)
T ss_dssp GGGGSSEEECCCTTSSSCSCSSEEEEEECTTS--CEEEEESSSCEEEECTTTCC----------EEEECCC------CCS
T ss_pred CCcccceEEcCCCCCCCCCCCeeEEEEECCCC--CEEEEECCCCeEEEcCCCCc----------EEEEecCCCCcccCCC
Confidence 76554322111 123458888887743 57778888789999987542 11111 12
Q ss_pred CCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC--CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 260 DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 260 ~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
...|.++...+++ .+|..|+.++-|..||..+++........ .....|.++...++|. +.+ |+.+ .+.+||..+
T Consensus 405 ~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwi-gt~~-Gl~~~~~~~ 480 (795)
T 4a2l_A 405 SNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN-LWL-GTLS-ALVRFNPEQ 480 (795)
T ss_dssp CSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC-EEE-EESS-CEEEEETTT
T ss_pred CccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC-EEE-EecC-ceeEEeCCC
Confidence 3568899888876 64777888778999999887632211100 2245799999999988 454 4444 588899876
Q ss_pred CC
Q 018293 338 DA 339 (358)
Q Consensus 338 ~~ 339 (358)
++
T Consensus 481 ~~ 482 (795)
T 4a2l_A 481 RS 482 (795)
T ss_dssp TE
T ss_pred Ce
Confidence 53
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.73 E-value=1.9e-05 Score=70.83 Aligned_cols=61 Identities=8% Similarity=0.083 Sum_probs=39.0
Q ss_pred CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccccccc
Q 018293 282 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 282 dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
+|.|..||+.+++..-..... .++..-.....+. +++.++.||.++.||.++|+.+.+.-.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagg-lvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH---LPLWAGVLATAGN-LVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES---SCCCSCCEEETTT-EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEECCCCCEEEEecCC---CCCcccceEeCCC-EEEEECCCCcEEEEECCCCCEEEEecC
Confidence 578999999998843222221 1111111122344 566799999999999999998866433
No 267
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.73 E-value=2.6e-05 Score=73.06 Aligned_cols=198 Identities=13% Similarity=0.162 Sum_probs=127.3
Q ss_pred cccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecc-------cccceeeEEEcCCCCcEEEEEeCCCcEEEEE
Q 018293 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH-------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 194 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 194 (358)
...|.++...++ + .|..|+.++-+..||..+++....... ....|.++...+++ . +..|+.+ -|.+||
T Consensus 214 ~~~i~~i~~d~~-g-~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~-lWigt~~-Gl~~~~ 288 (795)
T 4a2l_A 214 TKQIQAILQQSP-T-RIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQN-R-LWIGTFN-DLNIYH 288 (795)
T ss_dssp CCCEEEEEEEET-T-EEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTS-C-EEEEESS-CEEEEE
T ss_pred CCeeEEEEEcCC-C-CEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCC-C-EEEEeCC-hhheEc
Confidence 456888887776 4 345566555589999877654332211 13568999988887 4 4455555 588888
Q ss_pred cccCCCcccee-------eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe-------ecC
Q 018293 195 ARISTHSGFKW-------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-------AHD 260 (358)
Q Consensus 195 ~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-------~~~ 260 (358)
..+........ .....|.++..++++ .+..|+.++-|..|+...... ..+. ...
T Consensus 289 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~----------~~~~~~~~~~~l~~ 356 (795)
T 4a2l_A 289 EGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRNRF----------KNIRNIPYKNSLSD 356 (795)
T ss_dssp TTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS--CEEEEESSSCEEEECGGGGSS----------EEECCCTTSSSCSC
T ss_pred CCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcccc----------eEEcCCCCCCCCCC
Confidence 76554322110 123568888888744 477888888899998765421 1111 123
Q ss_pred CceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEec------CCCCceeEEEEEcCCCCeEEEEEccCCeEEEEE
Q 018293 261 KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR------NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334 (358)
Q Consensus 261 ~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~ 334 (358)
..|.++...+++ .|..|+.++-|..||..+++....... ......|.++...++|+ +|..|+.++.|..||
T Consensus 357 ~~V~~i~~d~~g--~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 357 NVVSCIVEDKDK--NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILH 433 (795)
T ss_dssp SSEEEEEECTTS--CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEE
T ss_pred CeeEEEEECCCC--CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEe
Confidence 468899888876 456678887899999887653221111 01235689999988887 245577777899999
Q ss_pred ccCCC
Q 018293 335 TLSDA 339 (358)
Q Consensus 335 ~~~~~ 339 (358)
..+++
T Consensus 434 ~~~~~ 438 (795)
T 4a2l_A 434 RNSGQ 438 (795)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 87764
No 268
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.73 E-value=1.1e-06 Score=69.02 Aligned_cols=168 Identities=8% Similarity=0.016 Sum_probs=114.1
Q ss_pred ceeeeeccccc--ceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeecCCeee--EEEcCCCCCeEEEEecCC
Q 018293 156 KCNLTLEHHTD--KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVES--LAWDPHAEHSFVVSLEDG 231 (358)
Q Consensus 156 ~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~dg 231 (358)
+.+.++. |.. ....+.|+. + .++.+.+.+|.|+.+|+.+++..... ....... +++. ++.++++.-.++
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~--g~~Ly~ltw~~~ 116 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASD--GERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEEC--SSCEEEEESSSC
T ss_pred EEEEEEc-CCCccccceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEe--CCEEEEEEccCC
Confidence 3445553 443 336788873 3 78888889999999999999887755 4444433 5554 456777777899
Q ss_pred eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCc---ee
Q 018293 232 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAG---AV 308 (358)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~---~v 308 (358)
.+.+||..+. +.+.++..... -..++ +++ ..|+.+..++.|.++|..+.+.........+.. .+
T Consensus 117 ~v~V~D~~Tl---------~~~~ti~~~~e-GwGLt--~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~l 183 (268)
T 3nok_A 117 LLFTWSGMPP---------QRERTTRYSGE-GWGLC--YWN-GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELI 183 (268)
T ss_dssp EEEEEETTTT---------EEEEEEECSSC-CCCEE--EET-TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EEEEEECCcC---------cEEEEEeCCCc-eeEEe--cCC-CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccc
Confidence 9999999987 56666654322 23444 556 555555668899999999987544333332222 35
Q ss_pred EEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccccc
Q 018293 309 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 345 (358)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 345 (358)
+.+.|. +|+ +++..-.++.|.+.|..+++.+...-
T Consensus 184 NeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 184 NELECA-NGV-IYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp EEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred cccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 667777 675 77777678899999999998776543
No 269
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.72 E-value=1.1e-06 Score=68.31 Aligned_cols=173 Identities=12% Similarity=0.074 Sum_probs=108.9
Q ss_pred CceEEecCCC--CeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE
Q 018293 65 GNFMAVGSME--PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 142 (358)
Q Consensus 65 ~~~l~~g~~d--g~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 142 (358)
+.++.+.+.+ ..|+++|+.+++......+.. +.. --.+++. ++.+.....
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-------------------------~~f-geGi~~~--~~~ly~ltw 82 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-------------------------PYF-GAGIVAW--RDRLIQLTW 82 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-------------------------TCC-EEEEEEE--TTEEEEEES
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-------------------------Ccc-eeEEEEe--CCEEEEEEe
Confidence 5666666665 499999999877655432211 110 1122332 345666666
Q ss_pred cCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeeec-----CCeeeEEEc
Q 018293 143 ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA-----ADVESLAWD 217 (358)
Q Consensus 143 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~ 217 (358)
.++.+.+||.++.+.+.++.... .-..++ +++ ..|+.+..++.|.++|..+.+......-.. ..++.+.|.
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg-~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~ 158 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYPG-EGWALT--SDD-SHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV 158 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECSS-CCCEEE--ECS-SCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred eCCEEEEEECCcCcEEEEEeCCC-CceEEe--eCC-CEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe
Confidence 78999999999999999887433 234454 456 445556668899999998876554322211 245566665
Q ss_pred CCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee-------------cCCceeEEEecCCCCcEEEEEe
Q 018293 218 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-------------HDKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 218 ~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-------------~~~~i~~i~~~~~~~~~l~~~~ 280 (358)
++.+++..-.+..|.+.|.+++ +.+..+.. ...-.+.|+++|++.++++||-
T Consensus 159 --~G~lyanvw~s~~I~vIDp~tG---------~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 159 --NGELLANVWLTSRIARIDPASG---------KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp --TTEEEEEETTTTEEEEECTTTC---------BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred --CCEEEEEECCCCeEEEEECCCC---------CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 3435544546789999999887 33333331 1235689999998866666664
No 270
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.72 E-value=3.6e-07 Score=83.54 Aligned_cols=244 Identities=11% Similarity=0.154 Sum_probs=128.7
Q ss_pred ccccC-CCceEEecCCCC-----------eEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEE
Q 018293 59 LKDRE-KGNFMAVGSMEP-----------AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL 126 (358)
Q Consensus 59 ~~~s~-~~~~l~~g~~dg-----------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 126 (358)
.++.+ ++++++.|+.++ .+.+||..+.+-...... ...+.....
T Consensus 191 ~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~------------------------~~~~~~~~~ 246 (656)
T 1k3i_A 191 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT------------------------VTKHDMFCP 246 (656)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE------------------------ECSCCCSSC
T ss_pred EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc------------------------CCCCCCccc
Confidence 34456 888888887543 577888765432211000 011222233
Q ss_pred EEecCCCCCcEEEEEE-cCCeEEEEECCCCceeeeecccc-cceeeEEEcCCCCcEEEEEe-CC-----CcEEEEEcccC
Q 018293 127 GLAWNKEFRNILASAS-ADKQVKIWDVAAGKCNLTLEHHT-DKVQAVAWNHHSPQILLSGS-FD-----RSVVMKDARIS 198 (358)
Q Consensus 127 ~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~-~d-----g~i~i~d~~~~ 198 (358)
++++..+ +.+++.|+ .+..+.+||..+.+....-.... ..-.+++..+++ ++++.|+ .+ ..+.+||..+.
T Consensus 247 ~~~~~~~-g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 247 GISMDGN-GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEECTT-SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cccCCCC-CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCC-eEEEEeCcccCCcccccceEeCCCCC
Confidence 4566677 56888887 45689999998765332211111 112345566677 7888887 34 46899998765
Q ss_pred CCccce----eeecCCeeeEEEcCCCCCeEEEEecCC---------eEEEEEcccCCCCCCCCCCCccEEEeecC-----
Q 018293 199 THSGFK----WAVAADVESLAWDPHAEHSFVVSLEDG---------TIKGFDIRTAKSDPDSTSQQSSFTLHAHD----- 260 (358)
Q Consensus 199 ~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~----- 260 (358)
+-.... ......-....+.. ++..++.|+.+| .+..||..+. ........+.
T Consensus 325 ~W~~~~~~~~~p~~~~~~~~~~~~-~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~---------~w~~~~~~~~~~~~~ 394 (656)
T 1k3i_A 325 TWTSLPNAKVNPMLTADKQGLYRS-DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS---------GDVKSAGKRQSNRGV 394 (656)
T ss_dssp EEEEETTSCSGGGCCCCTTGGGTT-TCSCCEEECGGGCEEECCSSSEEEEEECSTT---------CEEEEEEECEETTEE
T ss_pred cceeCCCccccccccccccceeec-CCceEEEECCCCcEEEecCccceeeeecCCc---------ceeecCCcccccccc
Confidence 321100 00000000011122 334555565444 4677887764 2111111111
Q ss_pred ----CceeEEEecCCCCcEEEEEeCCC-----------cEEEEecCCCCceeeEecCCCCce-eEEEEEcCCCCeEEEEE
Q 018293 261 ----KAVCTISYNPLVPNLLATGSTDK-----------MVKLWDLSNNQPSCIASRNPKAGA-VFSVAFSEDSPFVLAIG 324 (358)
Q Consensus 261 ----~~i~~i~~~~~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~ 324 (358)
..-.++.+...++++++.|+.++ .+.+||..+.....+..-...... -.+++..|+++ +++.|
T Consensus 395 ~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~-i~v~G 473 (656)
T 1k3i_A 395 APDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS-TFITG 473 (656)
T ss_dssp CCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC-EEEEC
T ss_pred CCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC-EEEEC
Confidence 12234444443337888887543 578888877763322200112222 23456778998 68888
Q ss_pred ccC-----------CeEEEEEccCCC
Q 018293 325 GSK-----------GKLEIWDTLSDA 339 (358)
Q Consensus 325 ~~d-----------g~i~vw~~~~~~ 339 (358)
+.+ ..+.+||..+++
T Consensus 474 G~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 474 GQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CcccCcCcCCCCcccceEEEcCCCCc
Confidence 754 468999987643
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.72 E-value=6.1e-06 Score=70.17 Aligned_cols=196 Identities=11% Similarity=0.024 Sum_probs=126.3
Q ss_pred EEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceee
Q 018293 127 GLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA 206 (358)
Q Consensus 127 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 206 (358)
|.+..+. . +|+.+ ....|+..++........+.. ...+..++|.+.+..++++-...+.|..+++...........
T Consensus 81 C~~~~~~-~-~l~~~-~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 81 CKALGPE-P-VLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp EEECSSC-C-EEEEE-CBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred ECCcccc-c-eeEee-cCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence 4444443 3 34333 346788888876654444443 345789999987646666666778899999876543221222
Q ss_pred ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC-CcE
Q 018293 207 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD-KMV 285 (358)
Q Consensus 207 ~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-g~i 285 (358)
.......+++++.+++++++-...+.|.+.++... .....+.........+++.|.++.++++-... +.|
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~---------~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I 227 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---------HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRI 227 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC---------SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC---------ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEE
Confidence 22346778888866767777777788988887643 22222233335568999999774555555555 778
Q ss_pred EEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 286 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 286 ~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
..+++.......+ ....-.....++++|++..++++-...+.|..+++..
T Consensus 228 ~r~~~dG~~~~~~--~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 228 EASSMDGSGRRII--ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEETTSCSCEEE--ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred EEEeCCCCCcEEE--EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 8888876543222 2222345788999987776777777788999999864
No 272
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.70 E-value=6.7e-05 Score=67.81 Aligned_cols=206 Identities=11% Similarity=0.060 Sum_probs=135.1
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 202 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 202 (358)
..+..|+|.+.++.++.+-..++.|..+++........+.........+++.+.+++++++-...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 45789999998666666666788999999875543333332234567889887764666666677889999987544322
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEE-ecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 281 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 281 (358)
.....-.....++++|..+.++++- +..+.|...++... . ...+...-...+.++++++++.+.++-..
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~---------~-~~~l~~~~~~P~GlalD~~~~~LY~aD~~ 186 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS---------E-RTTLVPNVGRANGLTIDYAKRRLYWTDLD 186 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------S-CEEEECSCSSEEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC---------c-eEEEECCCCCcceEEEccccCEEEEEECC
Confidence 2223335578999999666444443 23567877777643 2 22222334567899999987466666666
Q ss_pred CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 282 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 282 dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
.+.|..+|+.......+.. .......+++.. + +++++-...+.|...|..+++....
T Consensus 187 ~~~I~~~d~dG~~~~v~~~---~l~~P~glav~~-~-~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 187 TNLIESSNMLGLNREVIAD---DLPHPFGLTQYQ-D-YIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp TTEEEEEETTSCSCEEEEE---CCSCEEEEEEET-T-EEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CCEEEEEcCCCCceEEeec---cCCCceEEEEEC-C-EEEEecCCCCEEEEEECCCCCceEE
Confidence 7889999997765422222 223345777765 3 3677777788999999877765543
No 273
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.70 E-value=3e-06 Score=70.23 Aligned_cols=198 Identities=8% Similarity=0.027 Sum_probs=119.0
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeec--------------------ccccceeeEEEcC-CCCcEE
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE--------------------HHTDKVQAVAWNH-HSPQIL 181 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~~l 181 (358)
....+++|.++ +.+++++..++.|..||..+++.. .+. .....+..+++.+ ++ + |
T Consensus 19 ~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~-l 94 (322)
T 2fp8_A 19 YAPNSFTFDST-NKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-Q-L 94 (322)
T ss_dssp SCCCCEECCTT-CSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-E-E
T ss_pred CCceEEEEcCC-CCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCC-c-E
Confidence 34567889998 566778888999999998765432 221 0113468899997 55 4 5
Q ss_pred EEEeCCCcEEEEEcccCCCccceee----ecCCeeeEEEcC-CCCCeEEEEec-----------------CCeEEEEEcc
Q 018293 182 LSGSFDRSVVMKDARISTHSGFKWA----VAADVESLAWDP-HAEHSFVVSLE-----------------DGTIKGFDIR 239 (358)
Q Consensus 182 ~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~-~~~~~~~~~~~-----------------dg~i~i~d~~ 239 (358)
+.+...+.+..+|..++........ .......+++.+ ++ +++++-.. ++.|..||..
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 5554455588888765432211111 113467899998 65 35554322 3678888876
Q ss_pred cCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCC---ceeeEecCCCCceeEEEEEcCC
Q 018293 240 TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ---PSCIASRNPKAGAVFSVAFSED 316 (358)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~~v~~~~~~~~ 316 (358)
++ .. ..+.........++++|++..++++-+..+.|.+|++.... ...... ..+ ...+++.++
T Consensus 174 ~~---------~~-~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 174 TK---------ET-TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNAD 239 (322)
T ss_dssp TT---------EE-EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTT
T ss_pred CC---------EE-EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCC
Confidence 54 21 11211223457899999983344454667889999987532 111112 123 678999999
Q ss_pred CCeEEEEEcc----------CCeEEEEEccCCCcc
Q 018293 317 SPFVLAIGGS----------KGKLEIWDTLSDAGI 341 (358)
Q Consensus 317 ~~~~l~~~~~----------dg~i~vw~~~~~~~~ 341 (358)
|. ++++... .+.|..+|.. ++.+
T Consensus 240 G~-l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~ 272 (322)
T 2fp8_A 240 GH-FWVSSSEELDGNMHGRVDPKGIKFDEF-GNIL 272 (322)
T ss_dssp SC-EEEEEEEETTSSTTSCEEEEEEEECTT-SCEE
T ss_pred CC-EEEEecCcccccccCCCccEEEEECCC-CCEE
Confidence 98 4655443 4567778763 4444
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.69 E-value=9.9e-06 Score=69.87 Aligned_cols=206 Identities=7% Similarity=0.079 Sum_probs=113.7
Q ss_pred cccEEEEecCCCCCcEEEEEEcCC----eEEEEECCCCcee--eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEc
Q 018293 122 TDSVLGLAWNKEFRNILASASADK----QVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 195 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~dg----~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 195 (358)
......++|++++..++++...++ .+.+.+ ..+... ..+.. ......++++|++..++++-..++.|..++.
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 356889999999443444443222 344444 333222 22322 2346788999944376666667889999998
Q ss_pred ccCCCccce-eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec---------------
Q 018293 196 RISTHSGFK-WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--------------- 259 (358)
Q Consensus 196 ~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~--------------- 259 (358)
......... .........++|+|++..++++-...+.|..++........ .....+.+.
T Consensus 256 ~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~-----~~~~~~ag~~g~~g~~dg~~~~a~ 330 (430)
T 3tc9_A 256 TTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRL-----TTPYIVCGQQGAKDWVDGVGKKAR 330 (430)
T ss_dssp TTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE-----CCCEEEEECTTCBCCBCEEGGGCB
T ss_pred CCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccc-----cceEEEeccCCCCCCCCCCCcceE
Confidence 755431111 11123477899999765466666678899998876421000 001111111
Q ss_pred CCcee-EEEec--------CCCCcEEEEEeCCCcEEEEecCCCCceeeEec-----CC----------CCceeEEEEEcC
Q 018293 260 DKAVC-TISYN--------PLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-----NP----------KAGAVFSVAFSE 315 (358)
Q Consensus 260 ~~~i~-~i~~~--------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~----------~~~~v~~~~~~~ 315 (358)
-.... .++.. +++ .++++-...+.|+.++. ++....+... .+ .-.....++++|
T Consensus 331 ~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 408 (430)
T 3tc9_A 331 MHAPRQGTFVKNPAYKGSSDEY-DFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDE 408 (430)
T ss_dssp BSSEEEEEEEECGGGTTSSCCE-EEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEET
T ss_pred eCCCcceEEEccccccccCCCC-eEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEEC
Confidence 01122 45443 233 45555555677888883 4432222211 01 012467899999
Q ss_pred CCCeEEEEEccCCeEEEEEcc
Q 018293 316 DSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 316 ~~~~~l~~~~~dg~i~vw~~~ 336 (358)
++..++++-..++.|+.++++
T Consensus 409 ~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 409 ERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEEECCCCeEEEEccC
Confidence 544477777777888888764
No 275
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.68 E-value=7.2e-06 Score=74.97 Aligned_cols=161 Identities=10% Similarity=0.128 Sum_probs=100.3
Q ss_pred EEEecCCCCCcEEEEEEcCC-------------------eEEEEECCCCceeeeecc--cc-------cceeeEEEcCCC
Q 018293 126 LGLAWNKEFRNILASASADK-------------------QVKIWDVAAGKCNLTLEH--HT-------DKVQAVAWNHHS 177 (358)
Q Consensus 126 ~~~~~~~~~~~~l~s~~~dg-------------------~v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~ 177 (358)
..+++.|. ..+++.+..++ .|..+|.++|+.+..++. |. .+.....+..++
T Consensus 233 ~~~a~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 233 DSMAYDPE-LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp SCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred cceEEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCC
Confidence 35677777 45777777665 499999999998887764 21 222222222344
Q ss_pred C--cEEEEEeCCCcEEEEEcccCCCcccee--------ee----cCC------------------------eeeEEEcCC
Q 018293 178 P--QILLSGSFDRSVVMKDARISTHSGFKW--------AV----AAD------------------------VESLAWDPH 219 (358)
Q Consensus 178 ~--~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~----~~~------------------------i~~~~~~~~ 219 (358)
. ..++.++.+|.++++|..+++.+.... .. ..+ -..++++|+
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~ 391 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPG 391 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCC
Confidence 1 268889999999999998887652110 00 000 012567775
Q ss_pred CCCeEEEEe------------------------------------cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCce
Q 018293 220 AEHSFVVSL------------------------------------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAV 263 (358)
Q Consensus 220 ~~~~~~~~~------------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (358)
.+ ++++.. .+|.|..||+.++ +.+.....+. +.
T Consensus 392 ~g-~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG---------~~~W~~~~~~-~~ 460 (668)
T 1kv9_A 392 TG-LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQ---------KAAWKVPYPT-HW 460 (668)
T ss_dssp TT-EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTT---------EEEEEEEESS-SC
T ss_pred CC-EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCC---------cEEEEccCCC-CC
Confidence 44 443311 2378999999887 5555554432 23
Q ss_pred eEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeE
Q 018293 264 CTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 299 (358)
Q Consensus 264 ~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 299 (358)
....+...+ .++++++.|+.++.||.++++.....
T Consensus 461 ~~~~~~t~g-g~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 461 NGGTLSTAG-NLVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp CCCEEEETT-TEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCceeEeCC-CEEEEECCcccchhhhhhcChhheEe
Confidence 333333445 68888999999999999999854333
No 276
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.60 E-value=3.2e-05 Score=63.40 Aligned_cols=194 Identities=11% Similarity=0.156 Sum_probs=122.1
Q ss_pred CcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCC----CCc--EEEEEeC---CCcEEEEEcc--cCCCccc
Q 018293 135 RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHH----SPQ--ILLSGSF---DRSVVMKDAR--ISTHSGF 203 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--~l~~~~~---dg~i~i~d~~--~~~~~~~ 203 (358)
..+++.....+-+.+||+ +|+.++.+.. +.++.+..-|. +.. ++++... +++|.+|++. +.. ...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 456777778889999999 8888888863 45666666552 111 3344443 5789999774 322 111
Q ss_pred e------eeec-CCeeeEEE--cCCCC-CeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCC
Q 018293 204 K------WAVA-ADVESLAW--DPHAE-HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 273 (358)
Q Consensus 204 ~------~~~~-~~i~~~~~--~~~~~-~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 273 (358)
. .... ..+..+++ +|..+ .++++...+|.+..|++....... ...+.+..+.. .+.+-.+...+..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~--~~~~lVR~f~l-gsq~EgcvvDd~~- 191 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY--ISGKKVRAFKM-NSQTEGMAADDEY- 191 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC--EEEEEEEEEEC-SSCEEEEEEETTT-
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc--ccceEEEEecC-CCCcceEEEcCCC-
Confidence 1 0111 55667777 77444 368888899999999995421100 00144455544 4567888888876
Q ss_pred cEEEEEeCCCcEEEEecCCCC---ceeeEecC-C-CCceeEEEEE--cCCCC-eEEEEEccCCeEEEEEcc
Q 018293 274 NLLATGSTDKMVKLWDLSNNQ---PSCIASRN-P-KAGAVFSVAF--SEDSP-FVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~-~-~~~~v~~~~~--~~~~~-~~l~~~~~dg~i~vw~~~ 336 (358)
..|+.+-++..|..++.+... ...+.... + ....+..|++ .++++ |+++++-.++.+.+||..
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 788888888777777754221 12333331 2 2346888887 45555 777777678899999996
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.59 E-value=6.3e-05 Score=64.21 Aligned_cols=188 Identities=11% Similarity=-0.002 Sum_probs=121.0
Q ss_pred EEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCC----CccceeeecCCee
Q 018293 137 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST----HSGFKWAVAADVE 212 (358)
Q Consensus 137 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~ 212 (358)
+|+.+ ....|+..++........+. ....+..++|++.+..++++-...+.|..+++.... .............
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEe-ccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 44443 34789999988765544444 345678999998774555665667889989886532 1111111334577
Q ss_pred eEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC-CCcEEEEecC
Q 018293 213 SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-DKMVKLWDLS 291 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-dg~i~i~d~~ 291 (358)
.+++++.+++++++-...+.|.+.++... .....+.........|++.|.++.++++-.. .+.|...++.
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~---------~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGV---------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTC---------SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCC---------ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 88888766667777777889999988754 2222233333457899999976455555423 4789999987
Q ss_pred CCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 292 NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 292 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
......+ ....-.....|++++++..++++-...+.|..+|+..
T Consensus 234 G~~~~~~--~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 234 GVDIYSL--VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp SCSCEEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCccEEE--EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 6553222 2222346788999988776777666778999999864
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.59 E-value=3.5e-05 Score=66.45 Aligned_cols=205 Identities=8% Similarity=0.089 Sum_probs=113.3
Q ss_pred cccEEEEecCCCCCcEEEEEEcC---C-eEEEEECCCCce-eeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcc
Q 018293 122 TDSVLGLAWNKEFRNILASASAD---K-QVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~d---g-~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 196 (358)
......+++++++. ++++.... . .+...+...+.. ...+. .......++++|++..++++-..++.|+.+|..
T Consensus 181 ~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 181 IGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 35688999999954 55554321 1 133333222111 01121 223456788999442666666677889999987
Q ss_pred cCCCccceeee--cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeec---------------
Q 018293 197 ISTHSGFKWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--------------- 259 (358)
Q Consensus 197 ~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~--------------- 259 (358)
++......... ......++|+|++..++++-...+.|+.++........ .....+.+.
T Consensus 259 ~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~-----~~~~~~ag~~g~~g~~dg~~~~a~ 333 (433)
T 4hw6_A 259 TGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKL-----AVPYIVCGQHSSPGWVDGMGTGAR 333 (433)
T ss_dssp TCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCB-----CCCEEEEECTTCCCCBCEEGGGSB
T ss_pred CCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCccc-----CcEEEEEecCCCCccCCCcccceE
Confidence 55441112111 12234699999765466666667899998875321100 001111111
Q ss_pred CCceeEEEe---------cCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC-----C----------CCceeEEEEEc-
Q 018293 260 DKAVCTISY---------NPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN-----P----------KAGAVFSVAFS- 314 (358)
Q Consensus 260 ~~~i~~i~~---------~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~----------~~~~v~~~~~~- 314 (358)
-.....+++ .+++ +++++-...+.|+.++. ++....+.-.. + .-.....++++
T Consensus 334 ~~~P~giav~~n~~y~~dd~~g-~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 411 (433)
T 4hw6_A 334 LWGPNQGIFVKNEAYAGEEDEY-DFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDM 411 (433)
T ss_dssp CSSEEEEEEEECGGGTTSSCCE-EEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEET
T ss_pred EcCCccEEEEccccccccCCCC-cEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEEC
Confidence 123567888 5655 66666666788999985 44322111110 0 01236789999
Q ss_pred CCCCeEEEEEccCCeEEEEEcc
Q 018293 315 EDSPFVLAIGGSKGKLEIWDTL 336 (358)
Q Consensus 315 ~~~~~~l~~~~~dg~i~vw~~~ 336 (358)
++|. ++++=..++.|+.++++
T Consensus 412 ~~g~-lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 412 KRKC-FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTE-EEEEEGGGTEEEEEEEC
T ss_pred CCCE-EEEEeCCCCEEEEEecC
Confidence 5665 67766677888888764
No 279
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.56 E-value=4.5e-05 Score=68.32 Aligned_cols=165 Identities=13% Similarity=0.074 Sum_probs=94.4
Q ss_pred eEEEEECCCCceeeeecccc----------cceeeEEEcCCCC--cEEEEEeCCCcEEEEEcccCCCccceeeec-----
Q 018293 146 QVKIWDVAAGKCNLTLEHHT----------DKVQAVAWNHHSP--QILLSGSFDRSVVMKDARISTHSGFKWAVA----- 208 (358)
Q Consensus 146 ~v~iwd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----- 208 (358)
.|..+|.++++.+..++... .++. +....++. ..++.++.+|.+.++|..+++.+.......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 69999999999887775321 1211 22223452 256778899999999998876543211000
Q ss_pred --------CCe--------------------------eeEEEcCCCCCeEEEEe--------------------------
Q 018293 209 --------ADV--------------------------ESLAWDPHAEHSFVVSL-------------------------- 228 (358)
Q Consensus 209 --------~~i--------------------------~~~~~~~~~~~~~~~~~-------------------------- 228 (358)
.++ ..++++|+.+ ++++..
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR-TLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC-EEEEEchhccccccccccccccCCccccccce
Confidence 001 2456777544 555443
Q ss_pred -----------cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCcee
Q 018293 229 -----------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC 297 (358)
Q Consensus 229 -----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 297 (358)
.+|.|..||..++ +.+...... ..+.+..+...+ .+++.++.||.|+.+|.++++..-
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG---------~~~W~~~~~-~~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTG---------KAKWTKWEK-FAAWGGTLYTKG-GLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTC---------CEEEEEEES-SCCCSBCEEETT-TEEEEECTTSEEEEEETTTCCEEE
T ss_pred eccCccccCCCCCCeEEEEECCCC---------CEEEEecCC-CCccceeEEECC-CEEEEEcCCCeEEEEECCCCCEEE
Confidence 3478888888877 555554432 222222222234 577779999999999999998543
Q ss_pred eEecCCCCceeEEEEEcCCCCeEEEEE
Q 018293 298 IASRNPKAGAVFSVAFSEDSPFVLAIG 324 (358)
Q Consensus 298 ~~~~~~~~~~v~~~~~~~~~~~~l~~~ 324 (358)
....... ..-.-+.+..+|+.++++.
T Consensus 500 ~~~~~~~-~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 500 NFKMPSG-GIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp EEECSSC-CCSCCEEEEETTEEEEEEE
T ss_pred EEeCCCC-cEeeeEEEEECCEEEEEEE
Confidence 3332211 1111234556776334333
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.54 E-value=7.4e-05 Score=61.56 Aligned_cols=182 Identities=10% Similarity=0.027 Sum_probs=117.8
Q ss_pred CCeEEEEECCCCc--eeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc-eeeecCCeeeEEEcCCC
Q 018293 144 DKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF-KWAVAADVESLAWDPHA 220 (358)
Q Consensus 144 dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~ 220 (358)
...|+..++.... ....+. ....+..++|.+.++.++.+-...+.|..+++........ ....-.....+++.+.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 4679999988663 122222 2235678999987646666666778899999876643221 22222456788998766
Q ss_pred CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe-CCCcEEEEecCCCCceeeE
Q 018293 221 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLSNNQPSCIA 299 (358)
Q Consensus 221 ~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~ 299 (358)
++++++-...+.|.++++... ...............+++.|.++.++++-. ..+.|...++.......+
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~---------~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~- 160 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGS---------LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII- 160 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSC---------SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE-
T ss_pred CeEEEEECCCCEEEEEECCCC---------cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE-
Confidence 767777777889999998753 222222233345689999987634444432 357788888875442222
Q ss_pred ecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 300 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
....-...+.+++++++..++++-+..+.|..+|+..
T Consensus 161 -~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 161 -INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp -ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 1222345678999997776777777788999999864
No 281
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.52 E-value=7.5e-05 Score=67.42 Aligned_cols=209 Identities=9% Similarity=0.079 Sum_probs=128.9
Q ss_pred cccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce-eeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC
Q 018293 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 200 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 200 (358)
-..+..++|++.++.++++=...+.|..+++..... ...+...-.....+++.+.+++++++-...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 345789999987565555555578899999875532 2223322356789999987646666666788999999876543
Q ss_pred ccceeeecCCeeeEEEcCCCCCeEEEEe-cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEE
Q 018293 201 SGFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 279 (358)
Q Consensus 201 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~ 279 (358)
.......-.....++++|.++.++++-. ..+.|...++... .........-...+.++++++++++.++-
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~---------~~~~l~~~~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS---------SRFIIINSEIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC---------ceEEEEeCCCCCCcEEEEEccCCEEEEEe
Confidence 3222233456789999996665555542 2466777776543 22222222334568999999775666666
Q ss_pred eCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 280 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 280 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
...+.|..+|+.......+.. ........+++..+ .++++-...+.|...|..+++....
T Consensus 190 ~~~~~I~~~~~dG~~~~~~~~--~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 190 AKLNFIHKSNLDGTNRQAVVK--GSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp TTTCCEEEESSSCCEEC-----------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEE
T ss_pred CCCCeEEEecCCCCccEEEEe--CCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEE
Confidence 667889999987654322221 11122346677665 4677777788999999988776543
No 282
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.50 E-value=7.8e-05 Score=61.19 Aligned_cols=221 Identities=8% Similarity=0.038 Sum_probs=115.8
Q ss_pred cccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCC--eEEE
Q 018293 2 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP--AIEI 79 (358)
Q Consensus 2 ~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg--~i~v 79 (358)
.+.|+++++++....+ +|+.++.... ... .......+.. ++++++|+++++..... .|..
T Consensus 38 a~~~~g~lyv~d~~~~-----~I~~~d~~g~----~~~--~~~~~~~p~g-------ia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 38 ASAPDGTIFVTNHEVG-----EIVSITPDGN----QQI--HATVEGKVSG-------LAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EECTTSCEEEEETTTT-----EEEEECTTCC----EEE--EEECSSEEEE-------EEECTTSCEEEEEECTTSCEEEE
T ss_pred EECCCCCEEEEeCCCC-----eEEEECCCCc----eEE--EEeCCCCcee-------EEEcCCCcEEEEeccCCcceEEE
Confidence 5678888666653444 6777776542 111 1112222333 34588998766654322 3555
Q ss_pred EEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce-e
Q 018293 80 WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC-N 158 (358)
Q Consensus 80 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~ 158 (358)
++..+++... .. .. ........++..+. +..+++-..++.|.++|..+++. +
T Consensus 100 ~d~~~g~~~~-~~------------------------~~-~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~~v 152 (306)
T 2p4o_A 100 LVKSDGTVET-LL------------------------TL-PDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSI 152 (306)
T ss_dssp EECTTSCEEE-EE------------------------EC-TTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EcCCCCeEEE-EE------------------------eC-CCccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcEeE
Confidence 5654332110 00 00 01112233343444 44455444588999999775421 1
Q ss_pred eee---------cccccceeeEEEcCCCCcEEEEEeCCCcEEEEEccc-CCCcc-ceeeecCCeeeEEEcCCCCCeEEEE
Q 018293 159 LTL---------EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHSG-FKWAVAADVESLAWDPHAEHSFVVS 227 (358)
Q Consensus 159 ~~~---------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~ 227 (358)
... ...-.....+ ++++..++++-...+.|..+++.. +.... ...........+++++++ +++++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG-~l~va~ 229 (306)
T 2p4o_A 153 WLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEG-NLYGAT 229 (306)
T ss_dssp EEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTC-CEEEEC
T ss_pred EEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCC-CEEEEe
Confidence 100 0111234455 777745556666778999999875 22111 111222456789999965 566666
Q ss_pred ecCCeEEEEEcccCCCCCCCCCCCccE--EEeecCCceeEEEec---CCCCcEEEEEeC
Q 018293 228 LEDGTIKGFDIRTAKSDPDSTSQQSSF--TLHAHDKAVCTISYN---PLVPNLLATGST 281 (358)
Q Consensus 228 ~~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~~~~~~i~~i~~~---~~~~~~l~~~~~ 281 (358)
...+.|.++|.. + .... .+.......++++|. |++ ..|++.+.
T Consensus 230 ~~~~~V~~~~~~-G---------~~~~~~~~~~~~~~p~~~a~~g~~~d~-~~LyVt~~ 277 (306)
T 2p4o_A 230 HIYNSVVRIAPD-R---------STTIIAQAEQGVIGSTAVAFGQTEGDC-TAIYVVTN 277 (306)
T ss_dssp BTTCCEEEECTT-C---------CEEEEECGGGTCTTEEEEEECCSTTTT-TEEEEEEC
T ss_pred CCCCeEEEECCC-C---------CEEEEeecccccCCceEEEEecccCCC-CEEEEECC
Confidence 667889999865 3 2211 122222457899998 776 44444443
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.49 E-value=0.00016 Score=62.76 Aligned_cols=213 Identities=8% Similarity=0.064 Sum_probs=119.6
Q ss_pred ccEEEEec-------CCCCCcEEEEEEcCC------eEEEEECCC-Ccee-----eeecccccceeeEEEcCCCCcEEEE
Q 018293 123 DSVLGLAW-------NKEFRNILASASADK------QVKIWDVAA-GKCN-----LTLEHHTDKVQAVAWNHHSPQILLS 183 (358)
Q Consensus 123 ~~v~~~~~-------~~~~~~~l~s~~~dg------~v~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~ 183 (358)
.....|+| ++++..++++-..++ .|.+.+... ++.. ..+... .....++.+|++..++++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 46889999 999543444443331 266665443 2221 222222 245678899966477777
Q ss_pred EeCCCcEEEEEcc-------cCCC------c-----cceee--ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCC
Q 018293 184 GSFDRSVVMKDAR-------ISTH------S-----GFKWA--VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKS 243 (358)
Q Consensus 184 ~~~dg~i~i~d~~-------~~~~------~-----~~~~~--~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~ 243 (358)
-..++.|..+|+. ++.. . ..... .......++|+|++..++++-+....|+.++......
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~ 344 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKK 344 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcc
Confidence 7788899999997 4443 0 01111 1234678999997653555556778898877653210
Q ss_pred CCCCCCCCccEEEeec---------------CCcee-EEEec-------CCCCcEEEEEeCCCcEEEEecCCCCceeeEe
Q 018293 244 DPDSTSQQSSFTLHAH---------------DKAVC-TISYN-------PLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 300 (358)
Q Consensus 244 ~~~~~~~~~~~~~~~~---------------~~~i~-~i~~~-------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 300 (358)
.. .....+.+. -.... .++.. +++ .++++-.....|+.++. ++....+.-
T Consensus 345 ~~-----~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~~-~G~v~TiaG 417 (496)
T 3kya_A 345 EF-----ITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVTP-EGIVSTYAG 417 (496)
T ss_dssp EE-----CCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEECT-TCBEEEEEE
T ss_pred ee-----cccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEeC-CCCEEEEec
Confidence 00 000111111 01123 44443 344 66666667788999984 444222211
Q ss_pred cC-----------C----------CCceeEEEEEcCC-CCeEEEEEccCCeEEEEEccCCCccccc
Q 018293 301 RN-----------P----------KAGAVFSVAFSED-SPFVLAIGGSKGKLEIWDTLSDAGISNR 344 (358)
Q Consensus 301 ~~-----------~----------~~~~v~~~~~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 344 (358)
.. + .-.....|+++++ |. ++++=..+..|+.+++.....+...
T Consensus 418 ~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~-lyVaD~~N~rIrki~~~~~~~~~~~ 482 (496)
T 3kya_A 418 RGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM-FYVHDQVGHTIRTISMEQEENVAGD 482 (496)
T ss_dssp SCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE-EEEEETTTTEEEEEEECCCC-----
T ss_pred ccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE-EEEEeCCCCEEEEEECCCCcccccC
Confidence 10 1 0123678999997 66 6777777889999999887766543
No 284
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.49 E-value=0.0001 Score=58.15 Aligned_cols=191 Identities=9% Similarity=0.053 Sum_probs=114.4
Q ss_pred ccCCCc-eEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEE
Q 018293 61 DREKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 139 (358)
Q Consensus 61 ~s~~~~-~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 139 (358)
++|+++ ++++...++.|...|.. ++..+... +.+ ....-.|++.++ +.+++
T Consensus 34 ~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~-------------------------l~g-~~D~EGIa~~~~-g~~~v 85 (255)
T 3qqz_A 34 WSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP-------------------------LDF-VKDLETIEYIGD-NQFVI 85 (255)
T ss_dssp EETTTTEEEEEEETTEEEEEEETT-CCEEEEEE-------------------------CSS-CSSEEEEEECST-TEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe-------------------------cCC-CCChHHeEEeCC-CEEEE
Confidence 367655 55567778888888876 33222211 111 245677788877 45656
Q ss_pred EEEcCCeEEEEECCCCce---eeeec------ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEccc---CCCcccee--
Q 018293 140 SASADKQVKIWDVAAGKC---NLTLE------HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI---STHSGFKW-- 205 (358)
Q Consensus 140 s~~~dg~v~iwd~~~~~~---~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~-- 205 (358)
+.-.++.+.++++..... +.... ........++|+|.+ +.|+++.+.....+|.+.. ........
T Consensus 86 s~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~-~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~ 164 (255)
T 3qqz_A 86 SDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQD-HTFWFFKEKNPIEVYKVNGLLSSNELHISKDK 164 (255)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTT-TEEEEEEESSSEEEEEEESTTCSSCCEEEECH
T ss_pred EECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCC-CEEEEEECcCCceEEEEcccccCCceeeecch
Confidence 655677888888765432 12221 123456899999998 4555565555555555541 11111110
Q ss_pred -----eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee-c------CCceeEEEecCCCC
Q 018293 206 -----AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-H------DKAVCTISYNPLVP 273 (358)
Q Consensus 206 -----~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-~------~~~i~~i~~~~~~~ 273 (358)
.....+..++++|..+.+++.+..+..+..+|.... ......+.. . -..--.|+|.++|
T Consensus 165 ~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~--------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G- 235 (255)
T 3qqz_A 165 ALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE--------VIGEMSLTKGSRGLSHNIKQAEGVAMDASG- 235 (255)
T ss_dssp HHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC--------EEEEEECSTTGGGCSSCCCSEEEEEECTTC-
T ss_pred hhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC--------EEEEEEcCCccCCcccccCCCCeeEECCCC-
Confidence 112357899999988888888888899999997643 012222221 1 1256899999998
Q ss_pred cEEEEEeCCCcEEEEec
Q 018293 274 NLLATGSTDKMVKLWDL 290 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~d~ 290 (358)
++.++ ++-+.++.|..
T Consensus 236 ~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 236 NIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp CEEEE-ETTTEEEEEEC
T ss_pred CEEEE-cCCceEEEEEe
Confidence 64444 77676766654
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.47 E-value=0.0002 Score=64.28 Aligned_cols=164 Identities=13% Similarity=0.112 Sum_probs=94.6
Q ss_pred CeEEEEECCCCceeeeecc--cc--------cceeeEEEc-CCCC--cEEEEEeCCCcEEEEEcccCCCccceeeec---
Q 018293 145 KQVKIWDVAAGKCNLTLEH--HT--------DKVQAVAWN-HHSP--QILLSGSFDRSVVMKDARISTHSGFKWAVA--- 208 (358)
Q Consensus 145 g~v~iwd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--- 208 (358)
+.|..+|.++|+.+..++. |. .++. +... .++. ..++.++.+|.++++|.++++.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5899999999999887753 21 1121 1221 3452 367889999999999998876542111000
Q ss_pred ----------CC--------------------------------eeeEEEcCCCCCeEEEEe------------------
Q 018293 209 ----------AD--------------------------------VESLAWDPHAEHSFVVSL------------------ 228 (358)
Q Consensus 209 ----------~~--------------------------------i~~~~~~~~~~~~~~~~~------------------ 228 (358)
.+ -..++++|+.+ ++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTG-LFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTC-CEEEEEECEEEEEEECCCCCCTTS
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCC-EEEEechhcceeeecccccccCCC
Confidence 00 01356677544 344332
Q ss_pred ---------------cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCC
Q 018293 229 ---------------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293 (358)
Q Consensus 229 ---------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~ 293 (358)
.+|.|..||+.++ +.+.+..... ++..-.....+ .+++.|+.||.++.||.+++
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG---------~~~W~~~~~~-~~~~g~~~tag-glvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSG---------KVVWEHKEHL-PLWAGVLATAG-NLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTC---------CEEEEEEESS-CCCSCCEEETT-TEEEEECTTSEEEEEETTTC
T ss_pred ceeccceeecCCCCCCcceEEEEECCCC---------CEEEEecCCC-CCcccceEeCC-CEEEEECCCCcEEEEECCCC
Confidence 2578888998887 5555544332 22221112224 57888999999999999999
Q ss_pred CceeeEecCCCCceeEEEEEcCCCCeEEE
Q 018293 294 QPSCIASRNPKAGAVFSVAFSEDSPFVLA 322 (358)
Q Consensus 294 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 322 (358)
+.+-....... ..-.-+.+..+|+..++
T Consensus 518 ~~lW~~~~~~g-~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 518 KELWKFQTGSG-IVSPPITWEQDGEQYLG 545 (582)
T ss_dssp CEEEEEECSSC-CCSCCEEEEETTEEEEE
T ss_pred CEEEEecCCCC-cccCceEEEECCEEEEE
Confidence 85433333211 11112556677764343
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.44 E-value=8.7e-05 Score=63.99 Aligned_cols=200 Identities=7% Similarity=0.073 Sum_probs=118.4
Q ss_pred ccEEEEecCCC--CCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCC---C-cEEEEEcc
Q 018293 123 DSVLGLAWNKE--FRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD---R-SVVMKDAR 196 (358)
Q Consensus 123 ~~v~~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g-~i~i~d~~ 196 (358)
.....++|+|+ ++ .|+.+...+.|+.+|..+++...... .......+++++++ .++++.... . .+...+..
T Consensus 139 ~~P~gvavd~~s~~g-~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG-~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYD-DLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNG-DMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp SCCCEEEECTTTTTC-EEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTC-CEEEEECCSCTTSEEEEEECGG
T ss_pred CCCceEEEccccCCC-EEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCC-CEEEEcCCCCcccceEEEEECC
Confidence 34678899984 34 45555444899999998776554433 44568899999999 544444321 1 23333332
Q ss_pred cCCCccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-e-ecCCceeEEEecCCCCc
Q 018293 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-H-AHDKAVCTISYNPLVPN 274 (358)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~-~~~~~i~~i~~~~~~~~ 274 (358)
.................++++|.++.++++-..++.|+.+|..++ .....+ . .....-..++++|++..
T Consensus 216 ~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g---------~~~~~~~~~~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 216 SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG---------TLTEEEVMMDTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp GTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC---------CEEEEEEECSCCSSCEEEEECTTSSE
T ss_pred CCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC---------eEEEEEeccCCCCCcccEEEeCCCCE
Confidence 221111122234556788999965656666667788999998754 221111 1 11122346999999833
Q ss_pred EEEEEeCCCcEEEEecCC--CCc---eeeEecCC---C---------CceeEEEEE---------cCCCCeEEEEEccCC
Q 018293 275 LLATGSTDKMVKLWDLSN--NQP---SCIASRNP---K---------AGAVFSVAF---------SEDSPFVLAIGGSKG 328 (358)
Q Consensus 275 ~l~~~~~dg~i~i~d~~~--~~~---~~~~~~~~---~---------~~~v~~~~~---------~~~~~~~l~~~~~dg 328 (358)
++++-...+.|+.++... +.. ..+....+ . -.....+++ .++|. ++++-...+
T Consensus 287 LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~ 365 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSH 365 (433)
T ss_dssp EEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTT
T ss_pred EEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCC
Confidence 555556678899988653 221 11111101 0 123567888 67776 677777778
Q ss_pred eEEEEEc
Q 018293 329 KLEIWDT 335 (358)
Q Consensus 329 ~i~vw~~ 335 (358)
.|+.++.
T Consensus 366 ~I~~~~~ 372 (433)
T 4hw6_A 366 TVRVLTP 372 (433)
T ss_dssp EEEEECT
T ss_pred EEEEECC
Confidence 9999985
No 287
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.43 E-value=0.00084 Score=62.77 Aligned_cols=197 Identities=12% Similarity=-0.007 Sum_probs=124.0
Q ss_pred CcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeee---------cccccceeeEEEcCCCCcEEEEEeCCCcEE
Q 018293 121 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL---------EHHTDKVQAVAWNHHSPQILLSGSFDRSVV 191 (358)
Q Consensus 121 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 191 (358)
....|.++...++|. |-.|+.++-|..++..+....... ......|.++...+++ . +..|+.++-|.
T Consensus 311 ~~~~v~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~-lWigt~~~Gl~ 386 (781)
T 3v9f_A 311 SNASARYIFQDSFNN--IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-K-LWIGTDGGGIN 386 (781)
T ss_dssp SSSCEEEEEECSSCC--EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS-C-EEEEEBSSCEE
T ss_pred CCCeEEEEEEeCCCC--EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC-C-EEEEeCCCcEE
Confidence 346799999988843 556777777999987755432211 0123568888888776 4 56677677788
Q ss_pred EEEcccCCCccce---eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe---ecCCceeE
Q 018293 192 MKDARISTHSGFK---WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---AHDKAVCT 265 (358)
Q Consensus 192 i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ 265 (358)
.+|..+....... ......|.++...+++ .+.+|+.++-+..+|..+++ ...+. .....|.+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~----------~~~~~~~~~~~~~v~~ 454 (781)
T 3v9f_A 387 VFENGKRVAIYNKENRELLSNSVLCSLKDSEG--NLWFGTYLGNISYYNTRLKK----------FQIIELEKNELLDVRV 454 (781)
T ss_dssp EEETTEEEEECC-----CCCSBEEEEEECTTS--CEEEEETTEEEEEECSSSCE----------EEECCSTTTCCCCEEE
T ss_pred EEECCCCeEEEccCCCCCCCcceEEEEECCCC--CEEEEeccCCEEEEcCCCCc----------EEEeccCCCCCCeEEE
Confidence 8987654322211 1123568888877643 46678777778889876542 11111 12456888
Q ss_pred EEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC---CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 266 ISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN---PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 266 i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
+...+++ .|..|+. +-|..||..+++........ .....|.++...++|. +.+ |+.++.|..||..++
T Consensus 455 i~~d~~g--~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWi-gt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 455 FYEDKNK--KIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR-FWI-GTFGGGVGIYTPDMQ 525 (781)
T ss_dssp EEECTTS--EEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC-EEE-EESSSCEEEECTTCC
T ss_pred EEECCCC--CEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC-EEE-EEcCCCEEEEeCCCC
Confidence 8888766 4555665 56889998877643332211 1135789999999998 454 454344777887654
No 288
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=8.6e-05 Score=64.01 Aligned_cols=158 Identities=11% Similarity=0.154 Sum_probs=98.5
Q ss_pred ccEEEEecCC-CCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeC-CC----cEEEEEcc
Q 018293 123 DSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF-DR----SVVMKDAR 196 (358)
Q Consensus 123 ~~v~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg----~i~i~d~~ 196 (358)
.....|+++| +++ .|+.+...+.|+.+|++.++...... .......++|++++ +.|+++.. ++ .+...+.
T Consensus 137 ~~P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 137 GGAVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEA-DSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp SCCCEEEEETTEEE-EEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTS-SEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCCCEEEECCCCCC-eEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCC-CEEEEEeCCCCcccceEEEEeC-
Confidence 3567889998 434 45555555889999988766444333 44567899999999 64444443 22 2333443
Q ss_pred cCCCc-cceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcE
Q 018293 197 ISTHS-GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 275 (358)
Q Consensus 197 ~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 275 (358)
.+... ............++++|+++.++++-..++.|..++...... ..+.... .......++|+|++..+
T Consensus 213 ~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-------~~~~~~~-~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 213 ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-------TPLFTIQ-DSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-------EEEEECS-SSSCCEEEEECTTSSEE
T ss_pred CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-------EEEEEcC-CCCcceeEEEcCCCCEE
Confidence 33222 112223456788999996666777777788999999875410 0111111 12346789999998335
Q ss_pred EEEEeCCCcEEEEecCC
Q 018293 276 LATGSTDKMVKLWDLSN 292 (358)
Q Consensus 276 l~~~~~dg~i~i~d~~~ 292 (358)
+++-...+.|..++...
T Consensus 285 yv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 285 YIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEETTTTEEEEEEEET
T ss_pred EEEECCCCEEEEEeCCc
Confidence 55656678899988754
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.35 E-value=0.00037 Score=56.69 Aligned_cols=203 Identities=9% Similarity=0.021 Sum_probs=119.7
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceee-eecc----c--ccceeeEEE---cCCCCcEEEEEeC------
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL-TLEH----H--TDKVQAVAW---NHHSPQILLSGSF------ 186 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~----~--~~~v~~~~~---~~~~~~~l~~~~~------ 186 (358)
.-..+++|.+..+.++++.-..++|..||...+.... .+.. . ...+..|.| .|++ +++++...
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~af~~ 91 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAKSFNF 91 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETTTTCT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-cEEEEEcccccccc
Confidence 3445788988745555555589999999987654322 2322 1 124578999 5876 77775442
Q ss_pred -------CCcEEEEEcc---cCCCcccee--e-----------ecCCeeeEEEcCCCCCeEEEEecC-CeEEEEEcccCC
Q 018293 187 -------DRSVVMKDAR---ISTHSGFKW--A-----------VAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAK 242 (358)
Q Consensus 187 -------dg~i~i~d~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~ 242 (358)
+..+..+|+. +++...... . .......++..++ ++..++++.. +.|...+.....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~-GnaYVt~s~~~~~I~rV~pdG~~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD-GNSYVAFALGMPAIARVSADGKT 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT-SCEEEEEEESSCEEEEECTTSCC
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC-CCEEEeCCCCCCeEEEEeCCCCE
Confidence 6779999998 665543221 1 1124788999995 5577878777 777666665321
Q ss_pred CCCCCCCCCccEEEe----ecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecC--C---CCceeEEE-E
Q 018293 243 SDPDSTSQQSSFTLH----AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN--P---KAGAVFSV-A 312 (358)
Q Consensus 243 ~~~~~~~~~~~~~~~----~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~~~v~~~-~ 312 (358)
.....+. ......+.|+++|++ ++|++....|.+..+|+.......+ ... + .-.....| .
T Consensus 171 --------~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~~pv~~~v-~~~~~G~~~~~~~~dgilp 240 (334)
T 2p9w_A 171 --------VSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVSKPYAWPE-PVKINGDFGTLSGTEKIVT 240 (334)
T ss_dssp --------EEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECSSSSCCCE-ECEESSCCCCCTTEEEEEE
T ss_pred --------EeeeeecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCCCCcceee-cccccCCcccccCcccccc
Confidence 0111111 112236799999999 6666665599999999984322002 111 1 11122332 3
Q ss_pred EcCCCCeEEEEEccCCeEEEEEccC
Q 018293 313 FSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 313 ~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
.-.+|+-+|++.+..+.+.+.+...
T Consensus 241 ~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 241 VPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEETTEEEEEEEETTEEEEEECSST
T ss_pred cccCCEEEEEEcCCCCEEEEECCCC
Confidence 3346774466666666666655444
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.35 E-value=0.00034 Score=64.79 Aligned_cols=183 Identities=11% Similarity=0.002 Sum_probs=117.6
Q ss_pred cCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC----ccceeeecCCeeeEEEcC
Q 018293 143 ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH----SGFKWAVAADVESLAWDP 218 (358)
Q Consensus 143 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~ 218 (358)
....|+..++........+. ....+..|+|.+....++++-...+.|+.+++..... .............+++++
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 34568888887665444444 3456778999986646666666678899888875321 111111234567899988
Q ss_pred CCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC-CcEEEEecCCCCcee
Q 018293 219 HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD-KMVKLWDLSNNQPSC 297 (358)
Q Consensus 219 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~ 297 (358)
.+++++++-...+.|.+.++... .....+.........|++.|.++.++++-... +.|...++.......
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~---------~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGV---------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSS---------SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred cCCcEEEEecCCCeEEEEeCCCC---------eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 77777777778899999998754 22222223344578999999763555554333 679889887655322
Q ss_pred eEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 298 IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 298 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
+ ....-.....|++++.+..|+++-...+.|...++..
T Consensus 552 l--v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 552 L--VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp E--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred E--EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 2 2223356788999987776677666677899999854
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.34 E-value=4.4e-06 Score=76.65 Aligned_cols=159 Identities=11% Similarity=-0.018 Sum_probs=97.3
Q ss_pred EEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCC-CcEEEEEcccCCCccc
Q 018293 125 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-RSVVMKDARISTHSGF 203 (358)
Q Consensus 125 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~ 203 (358)
...|++.+.+++++++-...+.|.++++........+.........+++.|.++.++++-... +.|..+++........
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 456778765566666656678899999875543333332334567899999764544443333 6788777654332221
Q ss_pred eeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe--ecCCceeEEEecCCCCcEEEEEeC
Q 018293 204 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--AHDKAVCTISYNPLVPNLLATGST 281 (358)
Q Consensus 204 ~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~~l~~~~~ 281 (358)
....-.....|+|+|+++.++++-...+.|..+|+... .....+. ........|++.. ..++++...
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~---------~~~~~~~~~~~~~~P~glavd~--~~lywtd~~ 603 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---------NRKTILEDEKRLAHPFSLAVFE--DKVFWTDII 603 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS---------CCEEECCCSSSCSSCCCCEEET--TEEEEECST
T ss_pred EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC---------ceEEEEecCCcCCCceEeEEEC--CEEEEEeCC
Confidence 11223456789999977777777777889999998643 1111111 1112234555554 256666666
Q ss_pred CCcEEEEecCCCC
Q 018293 282 DKMVKLWDLSNNQ 294 (358)
Q Consensus 282 dg~i~i~d~~~~~ 294 (358)
.+.|..++..+++
T Consensus 604 ~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 604 NEAIFSANRLTGS 616 (699)
T ss_dssp TTCEEEEETTTEE
T ss_pred CCeEEEEEccCCC
Confidence 7889999987665
No 292
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=0.0011 Score=61.93 Aligned_cols=201 Identities=11% Similarity=0.069 Sum_probs=123.9
Q ss_pred cccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeec--------------ccccceeeEEEcCCCCcEEEEEeCC
Q 018293 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE--------------HHTDKVQAVAWNHHSPQILLSGSFD 187 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~l~~~~~d 187 (358)
...|.++...++ + .|..|+..+-|.++|..+++...... .....|.++...+++ . +-.|+.+
T Consensus 257 ~~~i~~i~~d~~-g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g-~-lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKD-N-KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN-N-IWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTT-S-EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSC-C-EEEEEBS
T ss_pred CceEEEEEECCC-C-CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC-C-EEEEecC
Confidence 356999988877 4 45566765668889987664322111 124568899888877 4 6667777
Q ss_pred CcEEEEEcccCCCcccee---------eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEee
Q 018293 188 RSVVMKDARISTHSGFKW---------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA 258 (358)
Q Consensus 188 g~i~i~d~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 258 (358)
+-|..++........... .....|.++...+++ .+..|+.++-|..||..+..... .......
T Consensus 333 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~------~~~~~~~ 404 (781)
T 3v9f_A 333 GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAIY------NKENREL 404 (781)
T ss_dssp SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEEC------C-----C
T ss_pred CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEEE------ccCCCCC
Confidence 888888877554322111 123458888887643 57778777778999986542100 0000012
Q ss_pred cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 259 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 259 ~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
....|.++...+++ . |..|+.++-+..+|..+++.............|.++...++|. +.+ |+. +.|..||..++
T Consensus 405 ~~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwi-gt~-~Gl~~~~~~~~ 479 (781)
T 3v9f_A 405 LSNSVLCSLKDSEG-N-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWI-GTH-AGVFVIDLASK 479 (781)
T ss_dssp CCSBEEEEEECTTS-C-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEE-EET-TEEEEEESSSS
T ss_pred CCcceEEEEECCCC-C-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEE-EEC-CceEEEeCCCC
Confidence 34568888888766 4 5557776779999987765211110012346799999988887 444 444 56888998765
Q ss_pred C
Q 018293 339 A 339 (358)
Q Consensus 339 ~ 339 (358)
+
T Consensus 480 ~ 480 (781)
T 3v9f_A 480 K 480 (781)
T ss_dssp S
T ss_pred e
Confidence 4
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.29 E-value=0.00038 Score=60.39 Aligned_cols=218 Identities=12% Similarity=0.052 Sum_probs=124.0
Q ss_pred cEEEEecCC-CCCcEEEEEEcCCeEEEEECCCCceeeeecc---cccceeeEEE-------cCCCCcEEEEEeCCC----
Q 018293 124 SVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEH---HTDKVQAVAW-------NHHSPQILLSGSFDR---- 188 (358)
Q Consensus 124 ~v~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~~l~~~~~dg---- 188 (358)
....|+|.| +.++++++-...+.|++.|++++.....+.. .......++| ++++ ..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G-~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA-EYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT-CEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC-CEEEEEeCCCCCcc
Confidence 577899998 4454555555557899999888765544432 1235789999 9998 5455554433
Q ss_pred ---cEEEEEccc-CCCcc----ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcc-------cCCCCCCC-CC---
Q 018293 189 ---SVVMKDARI-STHSG----FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR-------TAKSDPDS-TS--- 249 (358)
Q Consensus 189 ---~i~i~d~~~-~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~-------~~~~~~~~-~~--- 249 (358)
.+.+++... +.... ...........++++|+++.++++-..++.|..+|+. ++...... ..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266666433 12211 1222234567889999777778888888999999998 44210000 00
Q ss_pred -CCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCC--c---eeeEec---CCCC---------ceeE-E
Q 018293 250 -QQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ--P---SCIASR---NPKA---------GAVF-S 310 (358)
Q Consensus 250 -~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~---~~~~~~---~~~~---------~~v~-~ 310 (358)
...+... ........++|+|++..++++-+....|+.++..... . ..+.-. .+.. .... .
T Consensus 299 ~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 299 TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 0011111 1223457899999993245555567788886654321 1 111111 1110 1233 4
Q ss_pred EEEc-------CCCCeEEEEEccCCeEEEEEccCCCccccccc
Q 018293 311 VAFS-------EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 346 (358)
Q Consensus 311 ~~~~-------~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 346 (358)
++.. +++. ++++=..+..|+.++ .++ .+....+
T Consensus 378 v~vd~~~~~~~~~g~-lyVaD~~N~rIr~i~-~~G-~v~TiaG 417 (496)
T 3kya_A 378 VFVKNPDYTGEEEYD-FYFVDRLNFCVRKVT-PEG-IVSTYAG 417 (496)
T ss_dssp EEEECTTCCSSCCEE-EEEEEGGGTEEEEEC-TTC-BEEEEEE
T ss_pred EEEccccccccCCCe-EEEEECCCCEEEEEe-CCC-CEEEEec
Confidence 4454 4555 677777788999998 344 3444443
No 294
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.24 E-value=0.00075 Score=56.45 Aligned_cols=237 Identities=11% Similarity=0.074 Sum_probs=119.9
Q ss_pred CccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCC---C
Q 018293 58 PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE---F 134 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~ 134 (358)
.++|.|+|+++++- .+|.|++++ + ++ ..... ... ...........|+|+|+ +
T Consensus 35 ~ia~~pdG~l~V~e-~~g~I~~i~-~-g~-~~~~~--------------------~~~-v~~~g~~~p~gia~~pdf~~~ 89 (352)
T 2ism_A 35 ALAFLPDGGMLIAE-RPGRIRLFR-E-GR-LSTYA--------------------ELS-VYHRGESGLLGLALHPRFPQE 89 (352)
T ss_dssp EEEECTTSCEEEEE-TTTEEEEEE-T-TE-EEEEE--------------------ECC-CCCSTTCSEEEEEECTTTTTS
T ss_pred EEEEcCCCeEEEEe-CCCeEEEEE-C-CC-ccEee--------------------cce-EeecCCCCceeEEECCCCCCC
Confidence 34458999866654 569999988 2 21 11000 000 11123456889999997 5
Q ss_pred CcEEEEEEcC-----CeEEEEECCCCc-----ee-eeec---ccccceeeEEEcCCCCcEEEEEeC-------------C
Q 018293 135 RNILASASAD-----KQVKIWDVAAGK-----CN-LTLE---HHTDKVQAVAWNHHSPQILLSGSF-------------D 187 (358)
Q Consensus 135 ~~~l~s~~~d-----g~v~iwd~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~~l~~~~~-------------d 187 (358)
+.+.++-..+ +.|..++...++ .+ ..+. ........++|.|+| .++++.+. .
T Consensus 90 g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~ 168 (352)
T 2ism_A 90 PYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLG 168 (352)
T ss_dssp CEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSS
T ss_pred CEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCc
Confidence 5555554433 678888876432 11 1122 111234689999999 66655432 2
Q ss_pred CcEEEEEcccC------------CCccceeeecCCeeeEEEcCCCCCeEEEEecCCeE------EEEEcccCCCCC----
Q 018293 188 RSVVMKDARIS------------THSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTI------KGFDIRTAKSDP---- 245 (358)
Q Consensus 188 g~i~i~d~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i------~i~d~~~~~~~~---- 245 (358)
|.|.-++.... .........-.....++|+|+++.++++-.....+ .+.-+..+....
T Consensus 169 g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~ 248 (352)
T 2ism_A 169 GKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRV 248 (352)
T ss_dssp SEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTC
T ss_pred eEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcc
Confidence 55666665431 01111111112367789999555555553322221 233333222100
Q ss_pred -----CCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCce----eeEecCCCCceeEEEEEcCC
Q 018293 246 -----DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS----CIASRNPKAGAVFSVAFSED 316 (358)
Q Consensus 246 -----~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~v~~~~~~~~ 316 (358)
......+...+..| .....++|. ++ .++++....+.|...++...... ....+......+..+++.||
T Consensus 249 ~g~~~~~~~~~p~~~~~~~-~ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 325 (352)
T 2ism_A 249 VGRGNDPRYRDPLYFWPQG-FPPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPD 325 (352)
T ss_dssp CSCCCCTTSCCCSEECTTC-CCEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTT
T ss_pred cCCCCCCCCcCCeEecCCC-CCCcceEEE-CC-EEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCC
Confidence 00001233344222 345677774 34 66666656677888877654311 01111112356889999999
Q ss_pred CCeEEEEE
Q 018293 317 SPFVLAIG 324 (358)
Q Consensus 317 ~~~~l~~~ 324 (358)
|. ++++.
T Consensus 326 G~-lyv~~ 332 (352)
T 2ism_A 326 GA-LYVTT 332 (352)
T ss_dssp SC-EEEEE
T ss_pred Cc-EEEEE
Confidence 98 55554
No 295
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.20 E-value=0.0026 Score=57.46 Aligned_cols=203 Identities=6% Similarity=0.044 Sum_probs=124.6
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 202 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 202 (358)
..+.+++|.+.++.++++-...+.|..+++........+...-.....+++...+.+++++-+..+.|.+.++.......
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 45788999987565565555678899999875443333333334567899987664666666678889999887553322
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEe-cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 281 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 281 (358)
.....-.....++++|..+.++++-. ..+.|...++... .........-...+.++++++++++.++=+.
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~---------~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~ 499 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS---------DRVVLVNTSLGWPNGLALDYDEGKIYWGDAK 499 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC---------ccEEEEeCCCCCCeeeEEcccCCEEEEEECC
Confidence 12223356789999996564555532 2356776666532 2222222234567899999876455555556
Q ss_pred CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 282 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 282 dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
.+.|..+++.......+.. . .......++...+ +++.+-...+.|...|..++
T Consensus 500 ~~~I~~~~~dG~~~~~~~~-~-~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 500 TDKIEVMNTDGTGRRVLVE-D-KIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp TTEEEEEESSSCCCEEEEE-C-CCCSSCCEEEETT--EEEEECTTSSCEEEEESSSC
T ss_pred CCEEEEEecCCCceEEEec-c-CCCCcEEEEEECC--EEEEeecCCCeEEEEEcCCC
Confidence 6789999987655333322 1 1112234555444 46776666677877777776
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.20 E-value=0.0019 Score=58.42 Aligned_cols=207 Identities=8% Similarity=0.044 Sum_probs=126.9
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecc------cccceeeEEEcCCCCcEEEEEeCCCcEEEEEcc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 196 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 196 (358)
..+.+++|.+.++.++.+=...+.|..+++........+.. ....+..+++...+.++.++-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 45778888887454555544567788888654332222321 234578899998875666677778889998886
Q ss_pred cCCCccceeeecCCeeeEEEcCCCCCeEEEEecCC--eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCc
Q 018293 197 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 274 (358)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 274 (358)
.................++++|..+.++++-.... .|...++... .........-...+.+++.+..++
T Consensus 420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~---------~~~~l~~~~l~~P~gla~D~~~~~ 490 (628)
T 4a0p_A 420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT---------EREVLFFSGLSKPIALALDSRLGK 490 (628)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTE
T ss_pred CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC---------CcEEEEeccCCCccEEEEeCCCCE
Confidence 43222212223456899999996665666643333 5666665432 222222222345689999997745
Q ss_pred EEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 275 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 275 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
+.++-+..+.|..+++.......+.. ........++... + +++.+=...+.|...|..+|+...
T Consensus 491 LYw~D~~~~~I~~~~~dG~~r~~~~~--~~~~~P~glav~~-~-~ly~tD~~~~~i~~~~k~~G~~~~ 554 (628)
T 4a0p_A 491 LFWADSDLRRIESSDLSGANRIVLED--SNILQPVGLTVFE-N-WLYWIDKQQQMIEKIDMTGREGRT 554 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC--SSCSCEEEEEEET-T-EEEEEETTTTEEEEEETTSSSCCE
T ss_pred EEEEeCCCCEEEEEeCCCCceEEEEc--CCCCCcEEEEEEC-C-EEEEEECCCCeEEEEECcCCCCcE
Confidence 55555556889999997655322221 2233456777765 3 367777777889888888777544
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.18 E-value=0.00029 Score=63.24 Aligned_cols=192 Identities=12% Similarity=0.101 Sum_probs=117.5
Q ss_pred EEEEEEc-CCeEEEEEC-CCCceeeeecccccc-----------eeeEEEcCCCCcE----EEEEeCCCcEEEEEcccCC
Q 018293 137 ILASASA-DKQVKIWDV-AAGKCNLTLEHHTDK-----------VQAVAWNHHSPQI----LLSGSFDRSVVMKDARIST 199 (358)
Q Consensus 137 ~l~s~~~-dg~v~iwd~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~~----l~~~~~dg~i~i~d~~~~~ 199 (358)
.++.++. ++.|.-+|. ++|+.+.++...... ...+.+.|.+ .. ++.++.|+.+..+|..+++
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~-g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGD-GKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCC-SSSCCEEEEECTTSEEEEEETTTCC
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecC-CcceeEEEEEcCCCEEEEEECCCCC
Confidence 5666666 889999999 899988777532211 1234554333 33 7788889999999999887
Q ss_pred Cccceeeec----CCeee-EEEcCCCCCeEEEEe------cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCc------
Q 018293 200 HSGFKWAVA----ADVES-LAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKA------ 262 (358)
Q Consensus 200 ~~~~~~~~~----~~i~~-~~~~~~~~~~~~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~------ 262 (358)
..-...... ..+.+ .... ++ .+++++ .+|.|+.+|.+++ +.+..+......
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG---------~~~W~~~~~~~~~~~~~~ 210 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTG---------EQVWRAYATGPDKDLLLA 210 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTC---------CEEEEEESSSCHHHHTBC
T ss_pred EEEeecCCCCCccceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCC---------cEEEEEcCCCCccccccc
Confidence 653221111 01111 1111 23 566655 3799999999988 444443322110
Q ss_pred --------------------------------eeEEEecCCCCcEEEEEeCC----------------CcEEEEecCCCC
Q 018293 263 --------------------------------VCTISYNPLVPNLLATGSTD----------------KMVKLWDLSNNQ 294 (358)
Q Consensus 263 --------------------------------i~~i~~~~~~~~~l~~~~~d----------------g~i~i~d~~~~~ 294 (358)
-..+++.+.. .+++.++.+ +.|..+|..+++
T Consensus 211 p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~-g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~ 289 (599)
T 1w6s_A 211 SDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT-NLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGE 289 (599)
T ss_dssp TTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCC
T ss_pred cccccccccccccccccccCCCcceecCCCccccceeEeCCC-CEEEEeCCCCccccCcccCCCccccceEEEEeCCCCc
Confidence 0134455655 567766654 379999999998
Q ss_pred ceeeEecCCCC--------ceeEEEEEc-CCCC--eEEEEEccCCeEEEEEccCCCcccc
Q 018293 295 PSCIASRNPKA--------GAVFSVAFS-EDSP--FVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 295 ~~~~~~~~~~~--------~~v~~~~~~-~~~~--~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
..-......|. .++. +... .+|+ .+++.++.+|.++++|..+|+.+.+
T Consensus 290 ~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 290 AKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp EEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred eeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 64444444442 2222 2222 4663 3577788999999999999998754
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.14 E-value=0.0022 Score=52.73 Aligned_cols=197 Identities=9% Similarity=0.132 Sum_probs=114.5
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCC----CCc-
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE----FRN- 136 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~- 136 (358)
.|...+++.....+-+.+||+ .++.++. +.. +.++.+..-|. +..
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl-~G~~l~~---------------------------~~~--g~~nnVD~r~~~~l~g~~~ 86 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSL-DGKMLHS---------------------------YNT--GKLNNVDIRYDFPLNGKKV 86 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEET-TSCEEEE---------------------------ECC--SCEEEEEEEEEEEETTEEE
T ss_pred CCCccEEEEEcCCCCEEEEcC-CCcEEEE---------------------------ccC--CCcccEEEecccccCCceE
Confidence 344555665666788999999 4443332 111 34455554442 111
Q ss_pred -EEEEEEc---CCeEEEEECC--CCceeeeecc------cc-cceeeEEE--cCCCC-cEEEEEeCCCcEEEEEcccCCC
Q 018293 137 -ILASASA---DKQVKIWDVA--AGKCNLTLEH------HT-DKVQAVAW--NHHSP-QILLSGSFDRSVVMKDARISTH 200 (358)
Q Consensus 137 -~l~s~~~---dg~v~iwd~~--~~~~~~~~~~------~~-~~v~~~~~--~~~~~-~~l~~~~~dg~i~i~d~~~~~~ 200 (358)
++++... +++|++|++. +++ +..+.. .. ..+..+++ +|... .++++...+|.+..|++.....
T Consensus 87 dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~ 165 (355)
T 3amr_A 87 DIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKN 165 (355)
T ss_dssp EEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTT
T ss_pred eEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCC
Confidence 2333333 5789999773 333 444421 11 56677888 77543 3688888999999999854211
Q ss_pred ------ccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe-ec-CCceeEEEe--cC
Q 018293 201 ------SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-AH-DKAVCTISY--NP 270 (358)
Q Consensus 201 ------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~~-~~~i~~i~~--~~ 270 (358)
........+.+..+..++. ...|+++-++..|..|+.+...... ...+..+. ++ ...+..|++ .+
T Consensus 166 g~~~~~lVR~f~lgsq~EgcvvDd~-~g~Lyv~eEd~GIw~~da~p~~~~~----~~~v~~~~~g~l~aDvEGLai~~~~ 240 (355)
T 3amr_A 166 GYISGKKVRAFKMNSQTEGMAADDE-YGRLYIAEEDEAIWKFSAEPDGGSN----GTVIDRADGRHLTRDIEGLTIYYAA 240 (355)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETT-TTEEEEEETTTEEEEEECSTTSCSC----CEEEEEBSSSSBCSCEEEEEEEECG
T ss_pred CcccceEEEEecCCCCcceEEEcCC-CCeEEEecccceEEEEeCCcCCCCC----ceEEEEecCCccccCcceEEEEecC
Confidence 1123445678889999984 4588888888777666654321100 12222221 11 235778887 45
Q ss_pred CCCcEEEEEe-CCCcEEEEecC-CCC
Q 018293 271 LVPNLLATGS-TDKMVKLWDLS-NNQ 294 (358)
Q Consensus 271 ~~~~~l~~~~-~dg~i~i~d~~-~~~ 294 (358)
++..+|++.+ .+..+.+||.. +.+
T Consensus 241 ~g~gyLivSsQG~~s~~Vydr~~~~~ 266 (355)
T 3amr_A 241 DGKGYLMASSQGNSSYAIYDRQGKNK 266 (355)
T ss_dssp GGCEEEEEEEGGGTEEEEEESSTTCC
T ss_pred CCCEEEEEEcCCCCEEEEEECCCCCc
Confidence 5533566555 57789999997 444
No 299
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.09 E-value=0.00072 Score=55.18 Aligned_cols=185 Identities=16% Similarity=0.176 Sum_probs=92.8
Q ss_pred CcEEEEEEcC-----CeEEEEECCCCc---e--eeeecccccceeeEEEcCCCCcEEEEEeCCC-----cEEEEEcccCC
Q 018293 135 RNILASASAD-----KQVKIWDVAAGK---C--NLTLEHHTDKVQAVAWNHHSPQILLSGSFDR-----SVVMKDARIST 199 (358)
Q Consensus 135 ~~~l~s~~~d-----g~v~iwd~~~~~---~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~ 199 (358)
+.+++.|+.+ ..+.+||+.+.+ - +..+.........+.. ++ .+++.|+.++ .+.+||+.+.+
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcCCCCe
Confidence 4577777755 468999988765 2 2222211111122222 34 6777776543 57788877654
Q ss_pred Cccceee--ecCCeeeEEEcCCCCCeEEEEecC-----CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC
Q 018293 200 HSGFKWA--VAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 272 (358)
Q Consensus 200 ~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 272 (358)
-...... ......++.+ ++.+++.|+.+ ..+.+||+.+..- ..+..+.........+.+ ++
T Consensus 140 W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W-------~~~~~~p~~r~~~~~~~~--~~ 207 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA---SGVIYCLGGYDGLNILNSVEKYDPHTGHW-------TNVTPMATKRSGAGVALL--ND 207 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEE-------EEECCCSSCCBSCEEEEE--TT
T ss_pred EEECCCCCCCcccceEEEE---CCEEEEECCCCCCcccceEEEEeCCCCcE-------EeCCCCCcccccceEEEE--CC
Confidence 2221110 0111122222 34466776654 4588888876421 111111111111122222 33
Q ss_pred CcEEEEEeCC-----CcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccC-----CeEEEEEccCC
Q 018293 273 PNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-----GKLEIWDTLSD 338 (358)
Q Consensus 273 ~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vw~~~~~ 338 (358)
.+++.|+.+ ..+.+||+.+.+...+............+.+ +++ +++.|+.+ ..+.+||+.+.
T Consensus 208 -~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 208 -HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGR-LYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp -EEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBEEEEEEEETTTT
T ss_pred -EEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCE-EEEEcCcCCCcccccEEEEcCCCC
Confidence 677777764 4689999988765433322222222222222 555 67778765 36788888764
No 300
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.01 E-value=0.0047 Score=51.65 Aligned_cols=246 Identities=12% Similarity=0.090 Sum_probs=123.2
Q ss_pred CccccCCCc-eEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCC---
Q 018293 58 PLKDREKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE--- 133 (358)
Q Consensus 58 ~~~~s~~~~-~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--- 133 (358)
.++|.|+|+ ++++ ...|.|++++.+.. ...... ...............|+++|+
T Consensus 22 ~i~~~pdG~~l~V~-e~~G~i~~~~~~g~-~~~~~~--------------------~~~~v~~~g~~g~~gia~~pdf~~ 79 (353)
T 2g8s_A 22 ALAFLPDNHGMLIT-LRGGELRHWQAGKG-LSAPLS--------------------GVPDVWAHGQGGLLDVVLAPDFAQ 79 (353)
T ss_dssp EEEECSTTCCEEEE-ETTTEEEEEETTTE-ECCCCB--------------------SCCCCCCSTTCSEEEEEECTTHHH
T ss_pred EEEEcCCCCEEEEE-eCCceEEEEeCCCc-eeeEec--------------------CCcccccCCCCCceeEEECCCCCC
Confidence 344589998 5554 45799998875321 100000 000011123456789999995
Q ss_pred CCcEEEEEEc-------CCeEEEEECCCC--c--eee----eec---ccccceeeEEEcCCCCcEEEEEeC---------
Q 018293 134 FRNILASASA-------DKQVKIWDVAAG--K--CNL----TLE---HHTDKVQAVAWNHHSPQILLSGSF--------- 186 (358)
Q Consensus 134 ~~~~l~s~~~-------dg~v~iwd~~~~--~--~~~----~~~---~~~~~v~~~~~~~~~~~~l~~~~~--------- 186 (358)
++.+.++-.. ...|..|++... + ... .+. ........+.|.|+| .++++.+.
T Consensus 80 ~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~ 158 (353)
T 2g8s_A 80 SRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQD 158 (353)
T ss_dssp HCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGGC
T ss_pred CCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccCC
Confidence 4545554333 235666666432 1 111 111 111224679999999 66655443
Q ss_pred ----CCcEEEEEcccCCC-----------ccceee-ecCCeeeEEEcCCCCCeEEEEecC--CeEEEEEcccCCCC----
Q 018293 187 ----DRSVVMKDARISTH-----------SGFKWA-VAADVESLAWDPHAEHSFVVSLED--GTIKGFDIRTAKSD---- 244 (358)
Q Consensus 187 ----dg~i~i~d~~~~~~-----------~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~d--g~i~i~d~~~~~~~---- 244 (358)
.|.|.-++....-. ...... --.....++|+|..+ .|.++... +.=.+.-+..+...
T Consensus 159 ~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g-~l~~~d~g~~~~dei~~i~~G~nyGwp~ 237 (353)
T 2g8s_A 159 LDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSN-ALWLNEHGPRGGDEINIPQKGKNYGWPL 237 (353)
T ss_dssp TTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTT-EEEEEEECSBSCEEEECCCTTCBCCTTT
T ss_pred CCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCC-CEEEEecCCCCCcEEeEeccCCcCCCCC
Confidence 24566666653210 111111 123367899999444 34443322 11122222221110
Q ss_pred ------------------CCCCCCCccEEEeecCCceeEEEecC-------CCCcEEEEEeCCCcEEEEecCCCCceeeE
Q 018293 245 ------------------PDSTSQQSSFTLHAHDKAVCTISYNP-------LVPNLLATGSTDKMVKLWDLSNNQPSCIA 299 (358)
Q Consensus 245 ------------------~~~~~~~~~~~~~~~~~~i~~i~~~~-------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 299 (358)
.......+...+..| .....+.|.+ ++ .++++....+.|...++..++.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~~~~~~~~ 315 (353)
T 2g8s_A 238 ATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNGDKVTEDG 315 (353)
T ss_dssp BCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred ccCCCCCCCCccCcccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCCCeEeeeE
Confidence 000011233344333 3567788864 24 67777667788888888765422222
Q ss_pred ec-CCCCceeEEEEEcCCCCeEEEEEc-cCCeE
Q 018293 300 SR-NPKAGAVFSVAFSEDSPFVLAIGG-SKGKL 330 (358)
Q Consensus 300 ~~-~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i 330 (358)
.+ ......+..+++.|||. ++++.. .+|.|
T Consensus 316 ~~~~~~~~rp~~v~~~pdG~-lyv~td~~~g~I 347 (353)
T 2g8s_A 316 RILTDRGQRIRDVRTGPDGY-LYVLTDESSGEL 347 (353)
T ss_dssp EESGGGCCCEEEEEECTTSC-EEEEECSTTEEE
T ss_pred EcccCCCCceeEEEECCCCc-EEEEEeCCCCEE
Confidence 22 12234788999999998 565433 34543
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.99 E-value=0.0017 Score=53.13 Aligned_cols=185 Identities=15% Similarity=0.132 Sum_probs=93.3
Q ss_pred CcEEEEEEcC----CeEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCC------CcEEEEEcccCCCcc
Q 018293 135 RNILASASAD----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD------RSVVMKDARISTHSG 202 (358)
Q Consensus 135 ~~~l~s~~~d----g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~ 202 (358)
+.+++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++ .+++.|+.+ ..+.+||..+.+-..
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EG-KIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TT-EEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CC-EEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 4577777755 678899988775322 22211111122222 44 677777755 458888887653211
Q ss_pred c--eeeecCCeeeEEEcCCCCCeEEEEec---------CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCC
Q 018293 203 F--KWAVAADVESLAWDPHAEHSFVVSLE---------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 271 (358)
Q Consensus 203 ~--~~~~~~~i~~~~~~~~~~~~~~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 271 (358)
. ..........+.+ ++.+++.|+. -..+.+||+.+..- ..+..+...... .+++.. +
T Consensus 133 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~-~~~~~~-~ 200 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW-------TELCPMIEARKN-HGLVFV-K 200 (306)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEESCTTTCEECCCEEEEETTTTEE-------EEECCCSSCCBS-CEEEEE-T
T ss_pred CCCCcCCcceeEEEEE---CCEEEEECCCCCCCCcccccceEEEeCCCCCeE-------EECCCccchhhc-ceEEEE-C
Confidence 0 0001111122222 3446666653 34588888876521 111111111111 122222 3
Q ss_pred CCcEEEEEeCC-----CcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccC-----CeEEEEEccCC
Q 018293 272 VPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-----GKLEIWDTLSD 338 (358)
Q Consensus 272 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vw~~~~~ 338 (358)
+ .+++.|+.+ ..+.+||+.+.+...+............+.+ ++. +++.|+.+ ..+.+||+.+.
T Consensus 201 ~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 201 D-KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSI-VYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp T-EEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTE-EEEEECBCSSSBCCEEEEEETTTT
T ss_pred C-EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCE-EEEEeCcCCCeeeeeEEEEcCCCC
Confidence 3 677776653 3588999988764333322222222223333 454 78888754 56889998764
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.97 E-value=0.0012 Score=53.68 Aligned_cols=162 Identities=9% Similarity=0.109 Sum_probs=103.3
Q ss_pred ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeee-------cCCeeeEEE---cCCCCCeEEEEec---
Q 018293 163 HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV-------AADVESLAW---DPHAEHSFVVSLE--- 229 (358)
Q Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~i~~~~~---~~~~~~~~~~~~~--- 229 (358)
.......+++|++....++++.-..++|..||...+......... ...+..+.| .|+ +.++++...
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~a 88 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKS 88 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccc
Confidence 344455688998866355555558999999998754322211111 113578999 675 545554432
Q ss_pred ----------CCeEEEEEcc---cCCCCCCCCCCCccEEEe--ec-----------CCceeEEEecCCCCcEEEEEeCC-
Q 018293 230 ----------DGTIKGFDIR---TAKSDPDSTSQQSSFTLH--AH-----------DKAVCTISYNPLVPNLLATGSTD- 282 (358)
Q Consensus 230 ----------dg~i~i~d~~---~~~~~~~~~~~~~~~~~~--~~-----------~~~i~~i~~~~~~~~~l~~~~~d- 282 (358)
+..|..||+. ++ +.+.... .. ......++..++| +..++++..
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg---------~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~ 158 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENS---------KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGM 158 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTC---------CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESS
T ss_pred ccccccccCCCCEEEEEcCCcCCCC---------CEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCCC
Confidence 6789999998 55 3333332 11 1247899999998 788888877
Q ss_pred CcEEEEecCCCCceeeEecCC----CCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 283 KMVKLWDLSNNQPSCIASRNP----KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 283 g~i~i~d~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
+.|...+...... ....... .....+.|+++|+|..+++ ....|.|..+|+.+
T Consensus 159 ~~I~rV~pdG~~~-~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv-~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 159 PAIARVSADGKTV-STFAWESGNGGQRPGYSGITFDPHSNKLIA-FGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEECTTSCCE-EEEEECCCCSSSCCSCSEEEEETTTTEEEE-ESSSSSEEEEECSS
T ss_pred CeEEEEeCCCCEE-eeeeecCCCcccccCcceEEEeCCCCEEEE-EcCCCeEEEEcCCC
Confidence 8877777665432 2111111 1223668999999996555 44499999999874
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.93 E-value=0.0031 Score=52.14 Aligned_cols=194 Identities=10% Similarity=0.056 Sum_probs=99.7
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCcee-eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEE-EcccCCC
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN-LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMK-DARISTH 200 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~-d~~~~~~ 200 (358)
..+..+.+.++ +..+++ +.+|.|.. ....++.- .........+..+.+.+++ .+++.+ .+|.+..- |-. +..
T Consensus 122 ~~~~~i~~~~~-~~~~~~-~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~-~~~~~g-~~G~~~~S~d~g-G~t 195 (327)
T 2xbg_A 122 GSPRLIKALGN-GSAEMI-TNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSG-EYVAVS-SRGSFYSTWEPG-QTA 195 (327)
T ss_dssp SCEEEEEEEET-TEEEEE-ETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTS-CEEEEE-TTSSEEEEECTT-CSS
T ss_pred CCeEEEEEECC-CCEEEE-eCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCC-cEEEEE-CCCcEEEEeCCC-CCc
Confidence 34667777665 445544 44564432 12223221 1222345578899999987 655554 45554443 321 111
Q ss_pred c-cceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCCCcEEEE
Q 018293 201 S-GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLAT 278 (358)
Q Consensus 201 ~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~ 278 (358)
- .........+..+.+.+++ .+++.+.+|.+++.+...+.. ...+... ..+...+.++.+.+++ .++++
T Consensus 196 W~~~~~~~~~~~~~~~~~~~g--~~~~~~~~G~~~~s~~D~G~t------W~~~~~~~~~~~~~~~~v~~~~~~-~~~~~ 266 (327)
T 2xbg_A 196 WEPHNRTTSRRLHNMGFTPDG--RLWMIVNGGKIAFSDPDNSEN------WGELLSPLRRNSVGFLDLAYRTPN-EVWLA 266 (327)
T ss_dssp CEEEECCSSSCEEEEEECTTS--CEEEEETTTEEEEEETTEEEE------ECCCBCTTSSCCSCEEEEEESSSS-CEEEE
T ss_pred eeECCCCCCCccceeEECCCC--CEEEEeCCceEEEecCCCCCe------eEeccCCcccCCcceEEEEecCCC-EEEEE
Confidence 1 1112234567888888854 345556788877764221210 0000000 0112357888898865 55555
Q ss_pred EeCCCcEEEEecCCCCceeeEe-cCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEc
Q 018293 279 GSTDKMVKLWDLSNNQPSCIAS-RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 335 (358)
Q Consensus 279 ~~~dg~i~i~d~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~ 335 (358)
+ .+|.+ .+....++.-.... .......+.++.|.+++. +++++.+|.|.-++-
T Consensus 267 g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 267 G-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ--GFILGQKGILLRYVT 320 (327)
T ss_dssp E-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE--EEEECSTTEEEEECC
T ss_pred e-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc--eEEEcCCceEEEEcC
Confidence 4 46766 34444444211111 112235678888876654 445677898776653
No 304
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.92 E-value=0.0016 Score=53.21 Aligned_cols=186 Identities=16% Similarity=0.168 Sum_probs=91.6
Q ss_pred CcEEEEEEcC-----CeEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCCC-----cEEEEEcccCCCcc
Q 018293 135 RNILASASAD-----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFDR-----SVVMKDARISTHSG 202 (358)
Q Consensus 135 ~~~l~s~~~d-----g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~ 202 (358)
+.+++.|+.+ ..+.+||..+.+-.. .+.........+.+ ++ .+++.|+.++ .+.+||+.+.+-..
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 5577777754 358899988764322 22211111122222 34 6777777553 46778876543211
Q ss_pred c--eeeecCCeeeEEEcCCCCCeEEEEecC-------CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCC
Q 018293 203 F--KWAVAADVESLAWDPHAEHSFVVSLED-------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 273 (358)
Q Consensus 203 ~--~~~~~~~i~~~~~~~~~~~~~~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 273 (358)
. .........++.+ ++.+++.|+.+ ..+.+||+.+..- ..+..+.........+.+ ++
T Consensus 139 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~~~~~~~--~~- 205 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV---GGLLYAVGGYDVASRQCLSTVECYNATTNEW-------TYIAEMSTRRSGAGVGVL--NN- 205 (302)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEETTTTEECCCEEEEETTTTEE-------EEECCCSSCCBSCEEEEE--TT-
T ss_pred cCCCCCcccCceEEEE---CCEEEEEeCCCCCCCccccEEEEEeCCCCcE-------EECCCCccccccccEEEE--CC-
Confidence 0 0001111122222 34466666542 3588888876421 111111111111122222 33
Q ss_pred cEEEEEeCC-----CcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCC-----eEEEEEccCCC
Q 018293 274 NLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG-----KLEIWDTLSDA 339 (358)
Q Consensus 274 ~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vw~~~~~~ 339 (358)
.+++.|+.+ ..+.+||+.+.+...+........... ++. -+++ +++.|+.++ .+.+||+.+.+
T Consensus 206 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~-~~~-~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 206 LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAG-VCA-VNGL-LYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE-EEE-ETTE-EEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCe-EEE-ECCE-EEEECCcCCCcccccEEEEcCCCCe
Confidence 677777664 368999998876443332222111111 222 2455 677787654 48999987643
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.89 E-value=0.0021 Score=52.32 Aligned_cols=145 Identities=16% Similarity=0.171 Sum_probs=72.0
Q ss_pred CcEEEEEEcC-----CeEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCC-----CcEEEEEcccCCCcc
Q 018293 135 RNILASASAD-----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARISTHSG 202 (358)
Q Consensus 135 ~~~l~s~~~d-----g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~ 202 (358)
+.+++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-..
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SG-VIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 4577777654 368899988765322 22211111122222 44 677777654 458888887653221
Q ss_pred ce--eeecCCeeeEEEcCCCCCeEEEEecC-----CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcE
Q 018293 203 FK--WAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 275 (358)
Q Consensus 203 ~~--~~~~~~i~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 275 (358)
.. .........+.+ ++.+++.|+.+ ..+.+||+.+..- ..+..+.........+.+ ++ .+
T Consensus 190 ~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W-------~~~~~~p~~r~~~~~~~~--~~-~i 256 (301)
T 2vpj_A 190 VTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDSW-------TTVTSMTTPRCYVGATVL--RG-RL 256 (301)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEE-------EEECCCSSCCBSCEEEEE--TT-EE
T ss_pred CCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCcE-------EECCCCCCcccceeEEEE--CC-EE
Confidence 10 001111122222 34577777654 4688999876521 111111111111122222 34 67
Q ss_pred EEEEeCC-----CcEEEEecCCCCc
Q 018293 276 LATGSTD-----KMVKLWDLSNNQP 295 (358)
Q Consensus 276 l~~~~~d-----g~i~i~d~~~~~~ 295 (358)
++.|+.+ ..+.+||+.+.+.
T Consensus 257 ~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 257 YAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp EEECCBCSSSBEEEEEEEETTTTEE
T ss_pred EEEcCcCCCcccccEEEEcCCCCeE
Confidence 7777665 3578888887654
No 306
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.80 E-value=0.0034 Score=51.36 Aligned_cols=185 Identities=11% Similarity=0.123 Sum_probs=91.3
Q ss_pred CcEEEEEEc----C-----CeEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCC-----CcEEEEEcccC
Q 018293 135 RNILASASA----D-----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARIS 198 (358)
Q Consensus 135 ~~~l~s~~~----d-----g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 198 (358)
+.+++.|+. + ..+.+||+.+.+-.. .+.........+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TT-EEEEECCEETTEECCCEEEEETTTT
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CC-EEEEEcCCCCCcccccEEEECCCCC
Confidence 456666665 2 468899988764322 12111111122222 44 667776643 35778888765
Q ss_pred CCccc--eeeecCCeeeEEEcCCCCCeEEEEecC-----CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCC
Q 018293 199 THSGF--KWAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 271 (358)
Q Consensus 199 ~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 271 (358)
+-... ..........+.+ ++.+++.|+.+ ..+.+||+.+..-. .+..+.........+.+ +
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-------~~~~~p~~r~~~~~~~~--~ 215 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWR-------MITAMNTIRSGAGVCVL--H 215 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEE-------ECCCCSSCCBSCEEEEE--T
T ss_pred eEeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEe-------eCCCCCCccccceEEEE--C
Confidence 32111 0111111222222 34566666654 45888988765211 11111111111122222 3
Q ss_pred CCcEEEEEeCC-----CcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccC-----CeEEEEEccCC
Q 018293 272 VPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-----GKLEIWDTLSD 338 (358)
Q Consensus 272 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vw~~~~~ 338 (358)
+ .+++.|+.+ ..+.+||+.+.+...+........... ++.. +++ +++.|+.+ ..+.+||+.+.
T Consensus 216 ~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 216 N-CIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALG-ITVH-QGR-IYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp T-EEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEEE-TTE-EEEECCBCSSCBCCEEEEEETTTT
T ss_pred C-EEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceE-EEEE-CCE-EEEEcCcCCCcccceEEEEcCCCC
Confidence 3 677777664 459999998876433322222111122 2222 455 67778754 45788998764
No 307
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.80 E-value=0.0092 Score=48.30 Aligned_cols=197 Identities=11% Similarity=0.147 Sum_probs=123.6
Q ss_pred cCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceee-e-
Q 018293 130 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA-V- 207 (358)
Q Consensus 130 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~- 207 (358)
.+|. .+.+|.-. ..++.++|+++.+.+..+.- ...|.-=.|-.+. .|+-.+ +..|+-|++........... +
T Consensus 74 MnP~-~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 74 MNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp ECSS-SSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS--EEEEEE-SSEEEEEESSTTCCCEEEEECCG
T ss_pred eCCC-ccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC--eEEEEc-CCcEEEEcccCCCCCceeeecch
Confidence 4777 56666654 68999999999988887774 4567767777654 344444 56899999986443332322 2
Q ss_pred ---cCCeeeEEEcCCCCCeEEEEe------cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC--CcEE
Q 018293 208 ---AADVESLAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV--PNLL 276 (358)
Q Consensus 208 ---~~~i~~~~~~~~~~~~~~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~l 276 (358)
...|..-..+++..-++++|- -.|.+.+|..+. ...+.+.+|......+...-+. ..++
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf 217 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----------KVSQPIEGHAASFAQFKMEGNAEESTLF 217 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT----------TEEEEECCSEEEEEEECCTTCSSCEEEE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc----------cccceeeeeeeeeEEEecCCCCCCceEE
Confidence 245666677776554555542 247788999875 4556777876655544443211 1233
Q ss_pred EEEeC---CCcEEEEecCCC---C-ce---eeE-ecC--CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 277 ATGST---DKMVKLWDLSNN---Q-PS---CIA-SRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 277 ~~~~~---dg~i~i~d~~~~---~-~~---~~~-~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
+-+.. .+.++|-++... . +. .+. .+. .......++..++... ++..-+.-|.|++||+.++.++.+
T Consensus 218 ~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 218 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp EEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccCcEEEE
Confidence 33332 257999998543 1 11 011 111 1234455788888776 566778899999999999998864
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.72 E-value=0.0071 Score=49.35 Aligned_cols=148 Identities=9% Similarity=0.046 Sum_probs=73.8
Q ss_pred CcEEEEEEcC------CeEEEEECCCCceeee--ecccccceeeEEEcCCCCcEEEEEeC---------CCcEEEEEccc
Q 018293 135 RNILASASAD------KQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSF---------DRSVVMKDARI 197 (358)
Q Consensus 135 ~~~l~s~~~d------g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~ 197 (358)
+.+++.|+.+ ..+.+||..+.+-... +.........+.+ ++ .+++.|+. -..+.+||+.+
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NG-LIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CC-EEEEECCCCCCCCcccccceEEEeCCCC
Confidence 5577777765 4689999887753221 2111111112222 44 66666653 34578888876
Q ss_pred CCCccce--eeecCCeeeEEEcCCCCCeEEEEecC-----CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecC
Q 018293 198 STHSGFK--WAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 270 (358)
Q Consensus 198 ~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 270 (358)
.+-.... .........+.+ ++.+++.|+.+ ..+.+||+.+..- ..+..+.........+.+
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~~~~~~~-- 246 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV---KDKIFAVGGQNGLGGLDNVEYYDIKLNEW-------KMVSPMPWKGVTVKCAAV-- 246 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE---TTEEEEECCEETTEEBCCEEEEETTTTEE-------EECCCCSCCBSCCEEEEE--
T ss_pred CeEEECCCccchhhcceEEEE---CCEEEEEeCCCCCCCCceEEEeeCCCCcE-------EECCCCCCCccceeEEEE--
Confidence 5321110 001111122222 34467776543 4588899876521 111111111112223333
Q ss_pred CCCcEEEEEeCC-----CcEEEEecCCCCceee
Q 018293 271 LVPNLLATGSTD-----KMVKLWDLSNNQPSCI 298 (358)
Q Consensus 271 ~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~ 298 (358)
++ .+++.|+.+ ..+.+||+.+.+...+
T Consensus 247 ~~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 247 GS-IVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp TT-EEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred CC-EEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence 34 777788754 4588899888764333
No 309
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.66 E-value=0.008 Score=49.30 Aligned_cols=185 Identities=10% Similarity=0.067 Sum_probs=89.5
Q ss_pred CcEEEEEEc----C-------CeEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCC--------CcEEEE
Q 018293 135 RNILASASA----D-------KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD--------RSVVMK 193 (358)
Q Consensus 135 ~~~l~s~~~----d-------g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~i~ 193 (358)
+.+++.|+. + ..+..||..+.+-.. .+....... +++.. ++ .+++.|+.+ ..+.+|
T Consensus 46 ~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 46 NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF-GLGEA-LN-SIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC-EEEEE-TT-EEEEECCEESSTTCCBCCCEEEE
T ss_pred CEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce-eEEEE-CC-EEEEEeCCcCCCCCcccceEEEE
Confidence 457777774 1 127788988765322 111111111 12222 33 667777632 458888
Q ss_pred EcccCCCccc--eeeecCCeeeEEEcCCCCCeEEEEec-C-----CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeE
Q 018293 194 DARISTHSGF--KWAVAADVESLAWDPHAEHSFVVSLE-D-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 265 (358)
Q Consensus 194 d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~-d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 265 (358)
|..+.+-... ..........+.+ ++.+++.|+. + ..+.+||..+..- ..+..+.........
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~~~~ 192 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPKKFEW-------KELAPMQTARSLFGA 192 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCTTSCBCCCEEEEETTTTEE-------EECCCCSSCCBSCEE
T ss_pred CCCCCcEeECCCCCCcccceeEEEE---CCEEEEEeCCCCCCcccceEEEEeCCCCeE-------EECCCCCCchhceEE
Confidence 8876531110 0011111122222 3446777765 2 4688899876521 111111111111122
Q ss_pred EEecCCCCcEEEEEeCCC-----cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCC------------
Q 018293 266 ISYNPLVPNLLATGSTDK-----MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG------------ 328 (358)
Q Consensus 266 i~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------------ 328 (358)
+.+ ++ .+++.|+.++ .+.+||+.+.+...+............+.+ +++ +++.|+.++
T Consensus 193 ~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~~~~~~~~~~ 266 (315)
T 4asc_A 193 TVH--DG-RIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGT-LYAIGGFATLETESGELVPTE 266 (315)
T ss_dssp EEE--TT-EEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEEEEEEEEECTTSCEEEEE
T ss_pred EEE--CC-EEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCE-EEEECCccccCcCCccccccc
Confidence 222 34 6777777654 488899988764443322222222222222 444 677777642
Q ss_pred --eEEEEEccCC
Q 018293 329 --KLEIWDTLSD 338 (358)
Q Consensus 329 --~i~vw~~~~~ 338 (358)
.+.+||+.+.
T Consensus 267 ~~~v~~yd~~~~ 278 (315)
T 4asc_A 267 LNDIWRYNEEEK 278 (315)
T ss_dssp EEEEEEEETTTT
T ss_pred cCcEEEecCCCC
Confidence 4778888764
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.57 E-value=0.016 Score=48.19 Aligned_cols=141 Identities=11% Similarity=0.081 Sum_probs=81.0
Q ss_pred CCCcEEEEEcccCCCccceeee--------cCCeeeEEEcCC--CC-CeEEEEec--CCeEEEEEcccCCCCCCCCCCCc
Q 018293 186 FDRSVVMKDARISTHSGFKWAV--------AADVESLAWDPH--AE-HSFVVSLE--DGTIKGFDIRTAKSDPDSTSQQS 252 (358)
Q Consensus 186 ~dg~i~i~d~~~~~~~~~~~~~--------~~~i~~~~~~~~--~~-~~~~~~~~--dg~i~i~d~~~~~~~~~~~~~~~ 252 (358)
.+|.|.++|..+.......... .-....+.+.++ +. +++++... +..+.+|++...... ...
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~-----~~~ 155 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS-----LLH 155 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTE-----EEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCE-----EEE
Confidence 6899999998743222111111 124556666542 33 24444333 567888888764210 022
Q ss_pred cEEEeec-CCceeEEEecCCCCcEEEEEe-----------------CCCcEEEEecCCCCceeeEecCCCCceeEEEEEc
Q 018293 253 SFTLHAH-DKAVCTISYNPLVPNLLATGS-----------------TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFS 314 (358)
Q Consensus 253 ~~~~~~~-~~~i~~i~~~~~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~ 314 (358)
+..+.+. -...+.+++.++| .+.++.. ..|.|.-+|. ++...+ ...-..-+.++|+
T Consensus 156 ~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~---~~~l~~pNGia~s 229 (355)
T 3sre_A 156 LKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVV---AEGFDFANGINIS 229 (355)
T ss_dssp EEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEE---EEEESSEEEEEEC
T ss_pred EeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEe---ecCCcccCcceEC
Confidence 2223222 2346889999988 6666543 1244555554 332111 1112346789999
Q ss_pred CCCCeEEEEEccCCeEEEEEccC
Q 018293 315 EDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 315 ~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
||++.++++-+..+.|..|++..
T Consensus 230 pDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 230 PDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCCEEEEEeCCCCeEEEEEECC
Confidence 99998888778889999999864
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.56 E-value=0.026 Score=47.10 Aligned_cols=238 Identities=10% Similarity=0.031 Sum_probs=121.2
Q ss_pred CccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCC---C
Q 018293 58 PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE---F 134 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~ 134 (358)
.++|.|+|+++++- .+|.|++++.+ +. ..... .. ...........|+++|+ +
T Consensus 33 ~ia~~pdG~l~V~e-~~g~I~~~d~~-G~--~~~~~--------------------~~-v~~~g~~g~~gia~~pdf~~~ 87 (354)
T 3a9g_A 33 SIAPLGGGRYLVTE-RPGRLVLISPS-GK--KLVAS--------------------FD-VANVGEAGLLGLALHPEFPKK 87 (354)
T ss_dssp EEEEEETTEEEEEE-TTTEEEEECSS-CE--EEEEE--------------------CC-CCCSTTCSEEEEEECTTTTTS
T ss_pred EEEEcCCCeEEEEe-CCCEEEEEeCC-Cc--eEeec--------------------cc-eeecCCCceeeEEeCCCCCcC
Confidence 33457899866654 45999888732 21 11100 00 11122356889999997 4
Q ss_pred CcEEEEEEc---C----CeEEEEECCCC--c-----ee-eeecc-cccceeeEEEcCCCCcEEEEEeC------------
Q 018293 135 RNILASASA---D----KQVKIWDVAAG--K-----CN-LTLEH-HTDKVQAVAWNHHSPQILLSGSF------------ 186 (358)
Q Consensus 135 ~~~l~s~~~---d----g~v~iwd~~~~--~-----~~-~~~~~-~~~~v~~~~~~~~~~~~l~~~~~------------ 186 (358)
+.+.++-+. + +.|..|+.... . .+ ..+.. .......+.|.|+| .++++.+.
T Consensus 88 g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~ 166 (354)
T 3a9g_A 88 SWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAADPRLAQDLSS 166 (354)
T ss_dssp CEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTTCGGGGTCTTC
T ss_pred CEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCCCCccccCCCC
Confidence 555554442 3 56777876644 1 11 11221 11234679999999 66665432
Q ss_pred -CCcEEEEEcccCC-------CccceeeecCCeeeEEEcCCCCCeEEEEecCC---eEEEEEcccCCCCC---------C
Q 018293 187 -DRSVVMKDARIST-------HSGFKWAVAADVESLAWDPHAEHSFVVSLEDG---TIKGFDIRTAKSDP---------D 246 (358)
Q Consensus 187 -dg~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg---~i~i~d~~~~~~~~---------~ 246 (358)
.|.|..++....- .......--.....++|+|+.+.++++-...+ .|.+. ..+.... .
T Consensus 167 ~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~nyGwp~~~g~~~~ 244 (354)
T 3a9g_A 167 LAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGNYGWPLATGKAGR 244 (354)
T ss_dssp CSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCBCCTTTCCSCCCC
T ss_pred CCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCcCCCCcccCCCCC
Confidence 2456655554320 01111111123567999995554555432221 23332 2221100 0
Q ss_pred CCCCCccEEEeecCCceeEEEec-------CCCCcEEEEEeCCCcEEEEecCCC-CceeeEe-cCCCCceeEEEEEcCCC
Q 018293 247 STSQQSSFTLHAHDKAVCTISYN-------PLVPNLLATGSTDKMVKLWDLSNN-QPSCIAS-RNPKAGAVFSVAFSEDS 317 (358)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~i~~~-------~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~-~~~~~~~v~~~~~~~~~ 317 (358)
.....+...+.........++|. .++ .++++.-..+.|...++... +...... +......+..+++.|||
T Consensus 245 ~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG 323 (354)
T 3a9g_A 245 GEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG 323 (354)
T ss_dssp TTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS
T ss_pred CCCcCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC
Confidence 00012333331122356788884 344 67766666778888888753 2211122 22234578899999999
Q ss_pred CeEEEEEc
Q 018293 318 PFVLAIGG 325 (358)
Q Consensus 318 ~~~l~~~~ 325 (358)
. ++++..
T Consensus 324 ~-lyv~~~ 330 (354)
T 3a9g_A 324 G-ILISTS 330 (354)
T ss_dssp C-EEEEEC
T ss_pred c-EEEEEe
Confidence 7 566553
No 312
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.49 E-value=0.035 Score=46.89 Aligned_cols=198 Identities=11% Similarity=0.145 Sum_probs=124.9
Q ss_pred ecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceee-e
Q 018293 129 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA-V 207 (358)
Q Consensus 129 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~ 207 (358)
-.+|. .+.+|.-. ..++.|+|+++.+.+..+.- ...|.-=.|-.+. .|+-.+ +..|+-|++.........+. +
T Consensus 72 IMnP~-~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 72 IMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EECSS-SSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSCCCEEEEECC
T ss_pred eeCCC-CcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC--eEEEEc-CCeeEEecccCCCCchhheecc
Confidence 35677 55565554 68999999999988887764 3456666776554 344444 56899999976443332322 2
Q ss_pred ----cCCeeeEEEcCCCCCeEEEEe------cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC--CcE
Q 018293 208 ----AADVESLAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV--PNL 275 (358)
Q Consensus 208 ----~~~i~~~~~~~~~~~~~~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~ 275 (358)
...|..-..+++..-++++|- -.|.+.+|..+. .....+.+|......+...-+. ..+
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----------~~sQ~ieGhaa~F~~~~~~g~~~~~~l 215 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----------KVSQPIEGHAASFAQFKMEGNAEESTL 215 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT----------CCEEEECCSEEEEEEEECTTCSSEEEE
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc----------cccchheeeeeeeEEEecCCCCCCceE
Confidence 245666677786554555542 347789999875 4566778887666555544211 123
Q ss_pred EEEEeCC---CcEEEEecCCC---C-ce---eeE-ecC--CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 276 LATGSTD---KMVKLWDLSNN---Q-PS---CIA-SRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 276 l~~~~~d---g~i~i~d~~~~---~-~~---~~~-~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
++-+... +.++|-++... . +. .+. .+. .......++..++... ++..-+.-|.|++||+.++.++.
T Consensus 216 f~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~i~ 294 (494)
T 1bpo_A 216 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIY 294 (494)
T ss_dssp EEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEecccceeee
Confidence 4434332 78999998543 1 11 010 111 1234456788888777 56677889999999999999886
Q ss_pred c
Q 018293 343 N 343 (358)
Q Consensus 343 ~ 343 (358)
+
T Consensus 295 ~ 295 (494)
T 1bpo_A 295 M 295 (494)
T ss_dssp E
T ss_pred e
Confidence 4
No 313
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.49 E-value=0.028 Score=45.80 Aligned_cols=148 Identities=13% Similarity=0.144 Sum_probs=72.8
Q ss_pred CcEEEEEEcC-----CeEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCC-----CcEEEEEcccCCCcc
Q 018293 135 RNILASASAD-----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARISTHSG 202 (358)
Q Consensus 135 ~~~l~s~~~d-----g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~ 202 (358)
+.+++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-..
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 4566666644 368899988764322 12111111122222 34 677777654 458888887653211
Q ss_pred c--eeeecCCeeeEEEcCCCCCeEEEEecC-----CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcE
Q 018293 203 F--KWAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 275 (358)
Q Consensus 203 ~--~~~~~~~i~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 275 (358)
. .........++.+ ++.+++.|+.+ ..+.+||+.+..- ..+..+....... +++.. ++ .+
T Consensus 199 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-------~~~~~~p~~r~~~-~~~~~-~~-~i 265 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETW-------TFVAPMKHRRSAL-GITVH-QG-RI 265 (308)
T ss_dssp CCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEE-------EECCCCSSCCBSC-EEEEE-TT-EE
T ss_pred CCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcE-------EECCCCCCCccce-EEEEE-CC-EE
Confidence 0 0011111222333 34577777654 4688999876521 1111111111111 22222 33 67
Q ss_pred EEEEeCC-----CcEEEEecCCCCceee
Q 018293 276 LATGSTD-----KMVKLWDLSNNQPSCI 298 (358)
Q Consensus 276 l~~~~~d-----g~i~i~d~~~~~~~~~ 298 (358)
++.|+.+ ..+.+||+.+.+...+
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred EEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 7777654 3477888887764333
No 314
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.43 E-value=0.1 Score=50.80 Aligned_cols=208 Identities=14% Similarity=0.126 Sum_probs=99.6
Q ss_pred EEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCC-CCeEEEEEcccccCcCceeecCCccccc
Q 018293 23 EVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEK 101 (358)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~~ 101 (358)
++..++..++ .+.......++..+.|+...+.. .-...++++|+|.. |++|+|+++++.+......+..
T Consensus 533 ~l~~fel~~~---~L~~~~~~~l~~evscl~i~~~~-~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~------ 602 (1158)
T 3ei3_A 533 ALYYLQIHPQ---ELRQISHTEMEHEVACLDITPLG-DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG------ 602 (1158)
T ss_dssp EEEEEEEETT---EEEEEEEEECSSCEEEEECCCCS-SSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS------
T ss_pred EEEEEEeeCC---ceeeecccCCCCceEEEEeecCC-CCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC------
Confidence 4445554433 23333334455566677653310 00113579999996 9999999997543322111100
Q ss_pred ccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEcCCeEEEEECC--CCceeee--ecccccceeeEEEcCCC
Q 018293 102 KKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNLT--LEHHTDKVQAVAWNHHS 177 (358)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~--~~~~~~~v~~~~~~~~~ 177 (358)
..-...|.-+.+. +..+|..|-.||.+.-+.+. +++.... ..-...++.-..+...+
T Consensus 603 -----------------~~~p~si~l~~~~--~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~ 663 (1158)
T 3ei3_A 603 -----------------EIIPRSILMTTFE--SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLS 663 (1158)
T ss_dssp -----------------SCCEEEEEEEEET--TEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSS
T ss_pred -----------------CCCCcEEEEEEeC--CCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCC
Confidence 0011223333442 35688899999988666553 4443221 11123455544454444
Q ss_pred CcEEEEEeCCCcEEEEEcccCCCccceeee-cCCe-eeEEEcCCC-CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccE
Q 018293 178 PQILLSGSFDRSVVMKDARISTHSGFKWAV-AADV-ESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSF 254 (358)
Q Consensus 178 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i-~~~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 254 (358)
...+++.+ +....++--+ ++ .. .... ...+ ....|+... +.-++.. .++.++|..+..... -...
T Consensus 664 ~~~V~a~s-~rp~liy~~~-~~-l~-~s~l~~~~v~~~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~-------~~~~ 731 (1158)
T 3ei3_A 664 TTNVFACS-DRPTVIYSSN-HK-LV-FSNVNLKEVNYMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQK-------LHIR 731 (1158)
T ss_dssp CEEEEEES-SSCEEEEESS-SS-EE-EEEBSSSCCCEEEEECCSSSTTEEEEE-CSSCEEEEEECCSSS-------EEEE
T ss_pred ceeEEEEC-CCCEEEEEcC-Cc-eE-EeccChHHhceEeccCcccCCCcEEEE-cCCceEEEEecccCC-------eeEE
Confidence 23333333 4444444332 11 11 1111 1223 233454322 2334443 355699988865411 2222
Q ss_pred EEeecCCceeEEEecCCC
Q 018293 255 TLHAHDKAVCTISYNPLV 272 (358)
Q Consensus 255 ~~~~~~~~i~~i~~~~~~ 272 (358)
.+.- ...+..++++|..
T Consensus 732 ~ipL-~~Tprri~y~~~~ 748 (1158)
T 3ei3_A 732 TVPL-YESPRKICYQEVS 748 (1158)
T ss_dssp EEEC-SSEEEEEEEEGGG
T ss_pred EEeC-CCCceEEEEcCCC
Confidence 2322 3456778888765
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.40 E-value=0.014 Score=49.08 Aligned_cols=149 Identities=15% Similarity=0.185 Sum_probs=92.5
Q ss_pred cEEEEEEcCCeEEEEECCCCceeeeeccc----ccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc--------
Q 018293 136 NILASASADKQVKIWDVAAGKCNLTLEHH----TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF-------- 203 (358)
Q Consensus 136 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------- 203 (358)
..++.+ .++.||.-++......+.+... -..+..+..+|+| .+|+..+ +..|.+..+-.+.....
T Consensus 33 t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 33 TRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC-CEEEEec-CCeEEEEEecCccccCccccccccc
Confidence 344443 3578888888754434444322 2257889999999 7777665 55788877763221110
Q ss_pred ---eee-------ecCCeeeEEEcCCCC--CeEEEEecCCeEEEEEcccCCCCCC-CCCCCccEEEeecCCceeEEEecC
Q 018293 204 ---KWA-------VAADVESLAWDPHAE--HSFVVSLEDGTIKGFDIRTAKSDPD-STSQQSSFTLHAHDKAVCTISYNP 270 (358)
Q Consensus 204 ---~~~-------~~~~i~~~~~~~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~~~ 270 (358)
... ...+|..+.|+|-+. ..+++-..|+.|++||+......+. .......+.+......|.+++|.+
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~ 189 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK 189 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC
Confidence 111 246799999999643 3899999999999999997432111 000011122223346789999999
Q ss_pred CCCcEEEEEe--CCCcEEEE
Q 018293 271 LVPNLLATGS--TDKMVKLW 288 (358)
Q Consensus 271 ~~~~~l~~~~--~dg~i~i~ 288 (358)
++ -.|+..+ ..|.|+-.
T Consensus 190 ~~-lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 190 DG-LTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TS-SCEEEEECTTSCEEEEE
T ss_pred CC-cEEEEEecCCCCCEEEE
Confidence 65 7676655 77877654
No 316
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.37 E-value=0.047 Score=45.36 Aligned_cols=185 Identities=6% Similarity=-0.041 Sum_probs=101.4
Q ss_pred cEEEEecCCCCCcEEEEEE-------------cCCeEEEEECCCC--cee-eeecc-----cccceeeEEEcC--CCCcE
Q 018293 124 SVLGLAWNKEFRNILASAS-------------ADKQVKIWDVAAG--KCN-LTLEH-----HTDKVQAVAWNH--HSPQI 180 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~-------------~dg~v~iwd~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~~~ 180 (358)
..-.+...|+ + ++++++ .+|.|.++|.++. +.. ..+.+ ..-....+.+.+ ++...
T Consensus 51 G~EDi~~~~~-G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILPN-G-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECTT-S-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcCC-C-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 3445566777 5 344444 6899999998742 211 12222 223566777755 34224
Q ss_pred EEEEe-C--CCcEEEEEcccCCCcccee-ee----cCCeeeEEEcCCCCCeEEEEe-----------------cCCeEEE
Q 018293 181 LLSGS-F--DRSVVMKDARISTHSGFKW-AV----AADVESLAWDPHAEHSFVVSL-----------------EDGTIKG 235 (358)
Q Consensus 181 l~~~~-~--dg~i~i~d~~~~~~~~~~~-~~----~~~i~~~~~~~~~~~~~~~~~-----------------~dg~i~i 235 (358)
|+++. . +..+.+|++.......... .. -...+.+.+.+++. ++++.. ..|.|.-
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEE
Confidence 44443 2 4678888876543322111 11 23467888888543 444432 1244544
Q ss_pred EEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCC-CCceeeEecCCCCceeEEEEEc
Q 018293 236 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIASRNPKAGAVFSVAFS 314 (358)
Q Consensus 236 ~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~v~~~~~~ 314 (358)
+|. + . ...+...-...+.++|+||+..+.++-+..+.|..|++.. +.......+ ...+..-.+++.
T Consensus 208 ~d~--~---------~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD 274 (355)
T 3sre_A 208 YSP--N---------D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVD 274 (355)
T ss_dssp ECT--T---------C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEEC
T ss_pred EEC--C---------e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEe
Confidence 443 2 1 1122222344689999999844555556678899999864 332222222 224567788999
Q ss_pred C-CCCeEEEEEc
Q 018293 315 E-DSPFVLAIGG 325 (358)
Q Consensus 315 ~-~~~~~l~~~~ 325 (358)
+ +|. +.+++.
T Consensus 275 ~e~G~-lwva~~ 285 (355)
T 3sre_A 275 PVTGD-LWVGCH 285 (355)
T ss_dssp TTTCC-EEEEEE
T ss_pred CCCCc-EEEEec
Confidence 9 588 455444
No 317
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.35 E-value=0.047 Score=45.00 Aligned_cols=196 Identities=8% Similarity=0.049 Sum_probs=98.0
Q ss_pred cccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeec---ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEccc-
Q 018293 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE---HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI- 197 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~- 197 (358)
...+.++.+.+. ..++ ++.++.|.. ....++.-.... .+...+..+.+.+++ ..+++ +.+|.|.. ...
T Consensus 79 ~~~~~~i~~~~~--~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~-~~~~~-~~~g~v~~--S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQGN--EGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNG-SAEMI-TNVGAIYR--TKDS 150 (327)
T ss_dssp CCEEEEEEEETT--EEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETT-EEEEE-ETTCCEEE--ESST
T ss_pred CccEEEEEecCC--eEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCC-CEEEE-eCCccEEE--EcCC
Confidence 446888888763 3444 456665443 323333222221 233456777777665 55544 45665432 222
Q ss_pred CCCcc-ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEE-EEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcE
Q 018293 198 STHSG-FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG-FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 275 (358)
Q Consensus 198 ~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i-~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 275 (358)
++.-. ........+..+.+.++ +.+++++ .+|.+.. .|-. +.. ...+ -......+..+.+.+++ .+
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~-~~~~~~g-~~G~~~~S~d~g-G~t------W~~~--~~~~~~~~~~~~~~~~g-~~ 218 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPS-GEYVAVS-SRGSFYSTWEPG-QTA------WEPH--NRTTSRRLHNMGFTPDG-RL 218 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTT-SCEEEEE-TTSSEEEEECTT-CSS------CEEE--ECCSSSCEEEEEECTTS-CE
T ss_pred CCCCEEeecCCCcceEEEEEcCC-CcEEEEE-CCCcEEEEeCCC-CCc------eeEC--CCCCCCccceeEECCCC-CE
Confidence 22111 11123346788999884 4455555 4555443 2321 100 0111 12334567889998877 54
Q ss_pred EEEEeCCCcEEEEecCCCCceeeEecC--CCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcc
Q 018293 276 LATGSTDKMVKLWDLSNNQPSCIASRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 276 l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 341 (358)
+ ..+.+|.+++.+...++........ .....+.++.+.+++. +++++ .+|.| ++....++..
T Consensus 219 ~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g-~~g~i-~~S~DgG~tW 282 (327)
T 2xbg_A 219 W-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAG-GAGAL-LCSQDGGQTW 282 (327)
T ss_dssp E-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEE-STTCE-EEESSTTSSC
T ss_pred E-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE-EEEEe-CCCeE-EEeCCCCccc
Confidence 4 4556788777642222210111111 1223588899998877 56654 46766 3444444443
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.31 E-value=0.047 Score=44.27 Aligned_cols=145 Identities=11% Similarity=0.105 Sum_probs=71.2
Q ss_pred CcEEEEEEcCC-----eEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCC-------CcEEEEEcccCCC
Q 018293 135 RNILASASADK-----QVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-------RSVVMKDARISTH 200 (358)
Q Consensus 135 ~~~l~s~~~dg-----~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~ 200 (358)
+.+++.|+.++ .+.+||+.+.+-.. .+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GG-LLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CC-EEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 45777777653 57889988764322 22111111112222 34 666666543 3578888876532
Q ss_pred ccc--eeeecCCeeeEEEcCCCCCeEEEEecC-----CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCC
Q 018293 201 SGF--KWAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 273 (358)
Q Consensus 201 ~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 273 (358)
... ..........+.+ ++.+++.|+.+ ..+.+||+.+..- ..+..+....... +++.. ++
T Consensus 186 ~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-------~~~~~~~~~r~~~-~~~~~-~~- 252 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNAW-------RQVADMNMCRRNA-GVCAV-NG- 252 (302)
T ss_dssp EEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTEE-------EEECCCSSCCBSC-EEEEE-TT-
T ss_pred EECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCCE-------eeCCCCCCccccC-eEEEE-CC-
Confidence 111 0001111222222 34577777654 3688999876421 1111111111111 12222 34
Q ss_pred cEEEEEeCCC-----cEEEEecCCCCc
Q 018293 274 NLLATGSTDK-----MVKLWDLSNNQP 295 (358)
Q Consensus 274 ~~l~~~~~dg-----~i~i~d~~~~~~ 295 (358)
.+++.|+.++ .+.+||+.+.+.
T Consensus 253 ~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 253 LLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEECCcCCCcccccEEEEcCCCCeE
Confidence 6777777653 488999887753
No 319
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.26 E-value=0.061 Score=44.47 Aligned_cols=239 Identities=12% Similarity=0.078 Sum_probs=123.5
Q ss_pred CccccCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCC---C
Q 018293 58 PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE---F 134 (358)
Q Consensus 58 ~~~~s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~ 134 (358)
.++|.|+|+++++-...|.|++++...+.. ..... ..............|+++|+ +
T Consensus 36 ~ia~~pdG~llVter~~G~I~~v~~~~g~~-~~v~~--------------------~~~v~~~g~~GllGia~~Pdf~~~ 94 (347)
T 3das_A 36 GLAPLPGGDLLVSSRDEATITRVDAKTGRK-TELGE--------------------VPGVSPSGEGGLLGIALSPDYASD 94 (347)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEE--------------------CTTCCCBTTBSEEEEEECTTHHHH
T ss_pred EEEEcCCCcEEEEEecCCEEEEEECCCCcE-eeecc--------------------cCceeecCCCCceeeEeccccccC
Confidence 445589999888876689999887543221 10000 00112234567899999995 2
Q ss_pred CcEEEEEE--cCCeEEEEECCCC----------cee-eeec-ccccceeeEEEcCCCCcEEEEEeC-------------C
Q 018293 135 RNILASAS--ADKQVKIWDVAAG----------KCN-LTLE-HHTDKVQAVAWNHHSPQILLSGSF-------------D 187 (358)
Q Consensus 135 ~~~l~s~~--~dg~v~iwd~~~~----------~~~-~~~~-~~~~~v~~~~~~~~~~~~l~~~~~-------------d 187 (358)
+.+.++-+ .++.|.-|.+..+ +.+ ..+. ........|.|.|+| .++++.+. .
T Consensus 95 g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~ 173 (347)
T 3das_A 95 HMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLG 173 (347)
T ss_dssp CEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCST
T ss_pred CEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccccCCCCCC
Confidence 43333322 3455666665542 111 1121 112234679999999 66666442 3
Q ss_pred CcEEEEEcccC--------CCccceeeecCCeeeEEEcCCCCCeEEEE-ecCCeEEEEEcccCCCCC---------CCCC
Q 018293 188 RSVVMKDARIS--------THSGFKWAVAADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSDP---------DSTS 249 (358)
Q Consensus 188 g~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~dg~i~i~d~~~~~~~~---------~~~~ 249 (358)
|.|.-.+.... .......++ .....++|+|+ +.++++= +.++.=.+.-+..+.... ....
T Consensus 174 G~IlRi~~dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~-G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~ 251 (347)
T 3das_A 174 GKILRMTPDGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDK-QRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGF 251 (347)
T ss_dssp TCEEEECTTSSBCTTCSSTTCCEEEBCC-SBCCEEEECTT-CCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTC
T ss_pred CEEEEEeCCCCccCCCCCCCCeEEeeCC-CCcceEEECCC-CCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccc
Confidence 55555555432 000111122 23567899995 4344432 223323333333332210 0111
Q ss_pred CCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCCCc--eeeEecCCCCceeEEEEEcCCCCeEEEE
Q 018293 250 QQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSEDSPFVLAI 323 (358)
Q Consensus 250 ~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 323 (358)
..++..+..+......++|.. + .++...-..+.|....+..... .....+.+..+.+..++..|||. ++++
T Consensus 252 ~~P~~~~~~~~~ap~G~~~~~-g-~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~-lyv~ 324 (347)
T 3das_A 252 HDPVAQWSTDEASPSGIAYAE-G-SVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDK-LWLV 324 (347)
T ss_dssp CCCSEEECTTTCCEEEEEEET-T-EEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTE-EEEE
T ss_pred cCCcEecCCCCCCCcceEEEc-C-ceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCc-EEEE
Confidence 234444444334567888874 3 5666665666677677655431 11223344456799999999998 4444
No 320
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.20 E-value=0.057 Score=44.20 Aligned_cols=185 Identities=9% Similarity=0.065 Sum_probs=86.9
Q ss_pred CcEEEEEEc----CC-------eEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCC-------CcEEEEE
Q 018293 135 RNILASASA----DK-------QVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-------RSVVMKD 194 (358)
Q Consensus 135 ~~~l~s~~~----dg-------~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~i~d 194 (358)
+.+++.|+. ++ .+..||..+.+-.. .+.........+.+ ++ .+++.|+.+ ..+.+||
T Consensus 57 ~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 57 NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DD-KIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TT-EEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CC-EEEEEcCccCCCCcccceEEEEe
Confidence 457777763 12 27788887765322 12111111112222 34 677777754 3477788
Q ss_pred cccCCCccc--eeeecCCeeeEEEcCCCCCeEEEEec------CCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEE
Q 018293 195 ARISTHSGF--KWAVAADVESLAWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 266 (358)
Q Consensus 195 ~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 266 (358)
..+.+-... ..........+.. ++.+++.|+. -..+.+||+.+..- ..+..+...... .++
T Consensus 134 ~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~-~~~ 202 (318)
T 2woz_A 134 PVAAKWSEVKNLPIKVYGHNVISH---NGMIYCLGGKTDDKKCTNRVFIYNPKKGDW-------KDLAPMKTPRSM-FGV 202 (318)
T ss_dssp TTTTEEEEECCCSSCEESCEEEEE---TTEEEEECCEESSSCBCCCEEEEETTTTEE-------EEECCCSSCCBS-CEE
T ss_pred CCCCCEeECCCCCCcccccEEEEE---CCEEEEEcCCCCCCCccceEEEEcCCCCEE-------EECCCCCCCccc-ceE
Confidence 765432110 0000011112222 3446666653 23588899876521 111111111111 122
Q ss_pred EecCCCCcEEEEEeCC-----CcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccC--------------
Q 018293 267 SYNPLVPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-------------- 327 (358)
Q Consensus 267 ~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------------- 327 (358)
+.. ++ .+++.|+.+ ..+.+||+.+.+...+........... ++. -+++ +++.|+.+
T Consensus 203 ~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~-~~~~-i~v~GG~~~~~~~~~~~~~~~~ 277 (318)
T 2woz_A 203 AIH-KG-KIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSIS-LVS-LAGS-LYAIGGFAMIQLESKEFAPTEV 277 (318)
T ss_dssp EEE-TT-EEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCE-EEE-ETTE-EEEECCBCCBC----CCBCCBC
T ss_pred EEE-CC-EEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceE-EEE-ECCE-EEEECCeeccCCCCceecccee
Confidence 222 33 677777653 347789998876443332222222122 222 2444 67777754
Q ss_pred CeEEEEEccCC
Q 018293 328 GKLEIWDTLSD 338 (358)
Q Consensus 328 g~i~vw~~~~~ 338 (358)
..+.+||+.+.
T Consensus 278 ~~v~~yd~~~~ 288 (318)
T 2woz_A 278 NDIWKYEDDKK 288 (318)
T ss_dssp CCEEEEETTTT
T ss_pred eeEEEEeCCCC
Confidence 35788888764
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.16 E-value=0.21 Score=48.68 Aligned_cols=176 Identities=11% Similarity=0.050 Sum_probs=105.3
Q ss_pred CeEEEEECCCCceeeeecc-cccceeeEE---EcCCCCcEEEEEe----------CCCcEEEEEcccCCCcc-ceeeecC
Q 018293 145 KQVKIWDVAAGKCNLTLEH-HTDKVQAVA---WNHHSPQILLSGS----------FDRSVVMKDARISTHSG-FKWAVAA 209 (358)
Q Consensus 145 g~v~iwd~~~~~~~~~~~~-~~~~v~~~~---~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~-~~~~~~~ 209 (358)
+.|++.|..+.+.+..+.- ....+.+++ |..+...++++|+ ..|.|.+|++...+... ......+
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 4588888888877655532 223344444 4444346788776 35889999997432211 1234567
Q ss_pred CeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEe
Q 018293 210 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289 (358)
Q Consensus 210 ~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d 289 (358)
++++++--. + ++++| ....|++|++... +.+..-..+-..+..+.....+ ++++.|..-..|.++.
T Consensus 887 ~v~al~~~~--g-~Lla~-ig~~l~vy~l~~~---------~~L~~~~~~~~~i~~~~l~~~~-~~I~vgD~~~Sv~~~~ 952 (1158)
T 3ei3_A 887 AVYSMVEFN--G-KLLAS-INSTVRLYEWTTE---------KELRTECNHYNNIMALYLKTKG-DFILVGDLMRSVLLLA 952 (1158)
T ss_dssp CEEEEEEET--T-EEEEE-ETTEEEEEEECTT---------SCEEEEEEECCCSCEEEEEEET-TEEEEEESSBCEEEEE
T ss_pred cCEEEeeeC--C-EEEEE-cCCEEEEEECCCC---------ceEEEEeeccccEEEEEEeccC-CEEEEEEhhheEEEEE
Confidence 788877543 3 45554 4578999999765 2222111111123322222234 7888888877777754
Q ss_pred c--CCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 290 L--SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 290 ~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
. ..++. .......+...++++.|-.++. ++.+..+|.|.+.....
T Consensus 953 y~~~~~~L-~~~a~D~~~~~vta~~~ld~~t--~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 953 YKPMEGNF-EEIARDFNPNWMSAVEILDDDN--FLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EETTTTEE-EEEEECCSCBCEEEEEEEETTE--EEEEETTSEEEEEEECT
T ss_pred EEcCCCeE-EEEEeecccccEEEEEEEccCc--EEEEcCCCcEEEEecCC
Confidence 4 33432 2233344566788999887663 56688999999988765
No 322
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.08 E-value=0.086 Score=42.79 Aligned_cols=242 Identities=13% Similarity=0.181 Sum_probs=139.3
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 141 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 141 (358)
+|..+.+|.=. ...++|+|+++.+.+.... ....|.-=.|-.+ +.|+-.
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~----------------------------~~e~VvfWkWis~--~~L~lV 123 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHT----------------------------MTDDVTFWKWISL--NTVALV 123 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEE----------------------------CSSCEEEEEECSS--SEEEEE
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhccee----------------------------cCCccEEEEecCC--CeEEEE
Confidence 78888777665 6789999998644433211 2356777777655 245444
Q ss_pred EcCCeEEEEECCCC-ceeeeecccc----cceeeEEEcCCCCcEEEEEe------CCCcEEEEEcccCCCccceeeecCC
Q 018293 142 SADKQVKIWDVAAG-KCNLTLEHHT----DKVQAVAWNHHSPQILLSGS------FDRSVVMKDARISTHSGFKWAVAAD 210 (358)
Q Consensus 142 ~~dg~v~iwd~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~ 210 (358)
+ +..|.-|+++.. .+.+.+..|. ..|.....+++..-++++|- -.|.+.+|..+...... ..+|...
T Consensus 124 T-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~-ieGhaa~ 201 (365)
T 2xzh_A 124 T-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAAS 201 (365)
T ss_dssp E-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE-ECCSEEE
T ss_pred c-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce-eeeeeee
Confidence 4 467999999753 4555555443 45666777888743444442 23678888876543222 2233222
Q ss_pred eeeEEEcCC--CCCeEEEEec---CCeEEEEEcccCC-CCCCCCCCCccEEE-e---ecCCceeEEEecCCCCcEEEEEe
Q 018293 211 VESLAWDPH--AEHSFVVSLE---DGTIKGFDIRTAK-SDPDSTSQQSSFTL-H---AHDKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 211 i~~~~~~~~--~~~~~~~~~~---dg~i~i~d~~~~~-~~~~~~~~~~~~~~-~---~~~~~i~~i~~~~~~~~~l~~~~ 280 (358)
...+.+..+ ...+++-+.. .+.+.+-++.... ... ...+....+ . ....-..++..++.. ..++.-+
T Consensus 202 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~--~f~kk~vdi~fppea~~DFPVamqvs~ky-gviyviT 278 (365)
T 2xzh_A 202 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ--PFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLIT 278 (365)
T ss_dssp EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCC--CCCCEEEEECCCTTCTTCCEEEEEEETTT-TEEEEEE
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCC--CcccccceeeCCccccCCceEEEEecccC-CEEEEEe
Confidence 222222111 1122332322 2589999985541 111 111111111 1 113345678888766 6888889
Q ss_pred CCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 281 TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 281 ~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
.-|.|++||++++..+....+. ..+|...+-+....- +++....|.|.--.+.....+.
T Consensus 279 K~G~ihlyDleTgt~i~~nrIS--~d~iF~ta~~~~~~G-i~~Vnr~GqVl~v~v~~~~ivp 337 (365)
T 2xzh_A 279 KYGYIHLYDLETGTCIYMNRIS--GETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEENIIP 337 (365)
T ss_dssp TTSEEEEEETTTCCEEEEEECC--SSCEEEEEEEGGGTE-EEEEETTCEEEEEEECTTTHHH
T ss_pred CCcEEEEEEcccCcEEEEeccC--CCceEEecccCCCCc-EEEEcCCCEEEEEEECcccEeh
Confidence 9999999999999854444443 456665555554443 4455688888877777655443
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.06 E-value=0.11 Score=43.91 Aligned_cols=241 Identities=13% Similarity=0.181 Sum_probs=140.2
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 141 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 141 (358)
+|..+.+|.=. ...+.|+|+++...+.... ....|.-=.|-.+ +.|+-.
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks~~----------------------------~~e~VvfWkWis~--~~l~lV 122 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHT----------------------------MTDDVTFWKWISL--NTVALV 122 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEEEE----------------------------CSSCCCEEEEEET--TEEEEE
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhccee----------------------------cCCCceEEEecCC--CeEEEE
Confidence 78888887665 6799999998644333211 1245555566544 245444
Q ss_pred EcCCeEEEEECCCC-ceeeeecccc----cceeeEEEcCCCCcEEEEEe------CCCcEEEEEcccCCCccceeeecCC
Q 018293 142 SADKQVKIWDVAAG-KCNLTLEHHT----DKVQAVAWNHHSPQILLSGS------FDRSVVMKDARISTHSGFKWAVAAD 210 (358)
Q Consensus 142 ~~dg~v~iwd~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~ 210 (358)
+ +..|.-|+++.. .+.+.+..|. ..|.....+++..-++++|- -.|.+.+|..+...... ..+|...
T Consensus 123 T-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~-ieGhaa~ 200 (494)
T 1bpo_A 123 T-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAAS 200 (494)
T ss_dssp C-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEE-ECCSEEE
T ss_pred c-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccch-heeeeee
Confidence 3 468999999743 4555555443 45666777888743444442 24678888877654322 3333333
Q ss_pred eeeEEEcCC--CCCeEEEEec---CCeEEEEEcccCC-CCCCCCCCCccEEE----eecCCceeEEEecCCCCcEEEEEe
Q 018293 211 VESLAWDPH--AEHSFVVSLE---DGTIKGFDIRTAK-SDPDSTSQQSSFTL----HAHDKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 211 i~~~~~~~~--~~~~~~~~~~---dg~i~i~d~~~~~-~~~~~~~~~~~~~~----~~~~~~i~~i~~~~~~~~~l~~~~ 280 (358)
...+.+..+ ...+++-+.. .+.+.+.++.... ... ...+....+ .....-..++..++.. ..++.-+
T Consensus 201 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~--~f~kk~vdv~fppe~~~DFPvamqvs~ky-gviyviT 277 (494)
T 1bpo_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ--PFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLIT 277 (494)
T ss_dssp EEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC--CCCCEEEECCCCTTSTTCCEEEEEEETTT-TEEEEEE
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC--CccceeeeeeCCcccccCceeEEEecccC-CEEEEEe
Confidence 333333211 1123333322 3789999986541 111 111111111 1113345678888876 6888889
Q ss_pred CCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcc
Q 018293 281 TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 281 ~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 341 (358)
.-|.+.+||+.++..+....+ ...+|...+-.....- +++....|.|.--.+.....+
T Consensus 278 K~G~i~lyDleTgt~i~~nrI--s~~~iF~t~~~~~~~G-i~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 278 KYGYIHLYDLETGTCIYMNRI--SGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp TTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEETTTTE-EEEEETTCEEEEEEECTTTHH
T ss_pred cCceEEEEecccceeeeeecc--cCCceEEecccCCCCc-EEEEccCceEEEEEEccccch
Confidence 999999999999985444443 3456666666555554 445668888887777665544
No 324
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.05 E-value=0.038 Score=46.11 Aligned_cols=56 Identities=11% Similarity=0.031 Sum_probs=30.3
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCC------eEEEEEccCCCccc
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG------KLEIWDTLSDAGIS 342 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~i~vw~~~~~~~~~ 342 (358)
.+.+||+.+.+...+..+......-.++ .-+++ +++.|+.++ .|.++++.+++.+.
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNS-LLIIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEE--EETTE-EEEEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeE--EeCCE-EEEEeeeCCCCCEeeeEEEEEEcCcEeEe
Confidence 4789999988765554444332222222 23555 677788553 46667888777554
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.91 E-value=0.13 Score=42.03 Aligned_cols=101 Identities=11% Similarity=0.052 Sum_probs=51.9
Q ss_pred CcEEEEEEcC--------CeEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeC-C-----CcEEEEEcccC
Q 018293 135 RNILASASAD--------KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSF-D-----RSVVMKDARIS 198 (358)
Q Consensus 135 ~~~l~s~~~d--------g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~-d-----g~i~i~d~~~~ 198 (358)
+.+++.|+.+ ..+.+||..+.+-.. .+....... +++. -++ .+++.|+. + ..+.+||+.+.
T Consensus 99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 99 NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMD-LVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETT-EEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECC-EEEEEeCCCCCCcccceEEEEeCCCC
Confidence 4566777643 458999998764322 221111111 2222 234 67777765 2 46888888765
Q ss_pred CCccc--eeeecCCeeeEEEcCCCCCeEEEEecCC-----eEEEEEcccC
Q 018293 199 THSGF--KWAVAADVESLAWDPHAEHSFVVSLEDG-----TIKGFDIRTA 241 (358)
Q Consensus 199 ~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~dg-----~i~i~d~~~~ 241 (358)
+-... .........++.+ ++.+++.|+.++ .+.+||+.+.
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred eEEECCCCCCchhceEEEEE---CCEEEEEeccCCCCccceEEEEECCCC
Confidence 32111 0011111222222 345777777654 5788888764
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.88 E-value=0.39 Score=47.22 Aligned_cols=242 Identities=12% Similarity=0.165 Sum_probs=133.9
Q ss_pred cCCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEE
Q 018293 62 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 141 (358)
Q Consensus 62 s~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 141 (358)
+|..+.+|.=. ..++.|+|+++...+.... ....|.-=.|-.. . .|+-.
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~klks~~----------------------------~~e~VvfWkWis~-~-~l~lV 122 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHT----------------------------MTDDVTFWKWISL-N-TVALV 122 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhhhhcccc----------------------------cCCCceEEEecCC-C-eeEEE
Confidence 78888777665 6899999998655443211 2345666677655 2 44443
Q ss_pred EcCCeEEEEECCCC-ceeeeeccc----ccceeeEEEcCCCCcEEEEEe------CCCcEEEEEcccCCCccceeeecCC
Q 018293 142 SADKQVKIWDVAAG-KCNLTLEHH----TDKVQAVAWNHHSPQILLSGS------FDRSVVMKDARISTHSGFKWAVAAD 210 (358)
Q Consensus 142 ~~dg~v~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~ 210 (358)
+ +..|.-|++... .+.+.+..| ...|..-..+++..-.+++|- -.|.+.+|..+...... ..+|.+.
T Consensus 123 T-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~-iegha~~ 200 (1630)
T 1xi4_A 123 T-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAAS 200 (1630)
T ss_pred c-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh-hhHhHhh
Confidence 3 467999999743 455555444 345666677777733444442 35788899887654332 2333333
Q ss_pred eeeEEEc--CCCCCeEEEEe---cCCeEEEEEcccC-CCCCCCCCCCccEE-E--eecCCceeEEEecCCCCcEEEEEeC
Q 018293 211 VESLAWD--PHAEHSFVVSL---EDGTIKGFDIRTA-KSDPDSTSQQSSFT-L--HAHDKAVCTISYNPLVPNLLATGST 281 (358)
Q Consensus 211 i~~~~~~--~~~~~~~~~~~---~dg~i~i~d~~~~-~~~~~~~~~~~~~~-~--~~~~~~i~~i~~~~~~~~~l~~~~~ 281 (358)
...+... +....+++.+. ..+.+.+-++... ........ +.+.. + .....-..++..++.. .++..-+.
T Consensus 201 F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~k-k~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk 278 (1630)
T 1xi4_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK-KAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITK 278 (1630)
T ss_pred hheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcc-ccccccCCcccccCcceEEEecccc-CEEEEEec
Confidence 3222221 11122222221 1368999988654 11111110 11111 1 1112334567788766 67888889
Q ss_pred CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcc
Q 018293 282 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 341 (358)
Q Consensus 282 dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 341 (358)
-|.+.+||+.++..+....+ ...+|...+-...... +++....|.|.--.+.....+
T Consensus 279 ~G~~~~~d~~t~~~i~~~ri--s~~~iF~~~~~~~~~g-~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 279 YGYIHLYDLETGTCIYMNRI--SGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred CceEEEEecccchhhhhccc--cCCceEEeccCCCCCc-eEEEcCCceEEEEEEccchhh
Confidence 99999999999985433333 3344554444443332 334556777666666554433
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.70 E-value=0.21 Score=41.53 Aligned_cols=61 Identities=13% Similarity=0.040 Sum_probs=27.9
Q ss_pred eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC------cEEEEecCCCCceeeEecC
Q 018293 232 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK------MVKLWDLSNNQPSCIASRN 302 (358)
Q Consensus 232 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~ 302 (358)
.+.+||+.+..- ..+..+........++.+ ++ .+++.|+.++ .+.++++++++......+.
T Consensus 286 ~~~~yd~~~~~W-------~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 286 STDIHLWHNGKW-------DKSGELSQGRAYGVSLPW--NN-SLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp CCEEEECC---C-------EEEEECSSCCBSSEEEEE--TT-EEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred eEEEEecCCCce-------eeCCCCCCCcccceeEEe--CC-EEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 477888876521 222222222222222222 34 7777787653 3666788888754443333
No 328
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.61 E-value=0.24 Score=41.18 Aligned_cols=206 Identities=12% Similarity=0.079 Sum_probs=104.9
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce--eeeec---ccccceeeEEEcCC---CCcEEEEEeCC-----Cc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC--NLTLE---HHTDKVQAVAWNHH---SPQILLSGSFD-----RS 189 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~~l~~~~~d-----g~ 189 (358)
.....++|.|++ .++ .+..+|.|.+++ +++. +..+. ........++++|+ +..++++-... +.
T Consensus 31 ~~P~~ia~~pdG-~l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDG-GML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTS-CEE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCC-eEE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 346799999994 444 456779999998 4432 22111 12356789999998 42444444432 67
Q ss_pred EEEEEcccCCCc---cceeeec------CCeeeEEEcCCCCCeEEEEec-------------CCeEEEEEcccCCCCCCC
Q 018293 190 VVMKDARISTHS---GFKWAVA------ADVESLAWDPHAEHSFVVSLE-------------DGTIKGFDIRTAKSDPDS 247 (358)
Q Consensus 190 i~i~d~~~~~~~---~~~~~~~------~~i~~~~~~~~~~~~~~~~~~-------------dg~i~i~d~~~~~~~~~~ 247 (358)
|..++....... ....... .....++|.|++ .++++.+. .|.|.-++....-.....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 778877643110 1111111 234689999966 45554322 245665655431000000
Q ss_pred C----CCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCc--------EEEEecCCCC----------------ceeeE
Q 018293 248 T----SQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM--------VKLWDLSNNQ----------------PSCIA 299 (358)
Q Consensus 248 ~----~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~--------i~i~d~~~~~----------------~~~~~ 299 (358)
. ......-..++. ....++|+|+.+.++++-..... |.+.. .+. .....
T Consensus 186 f~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~ 262 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYRDPLY 262 (352)
T ss_dssp TTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred ccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCCCCCCcCCeE
Confidence 0 001111222333 35789999943365555433332 33332 221 01222
Q ss_pred ecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 300 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 300 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
.+..| .....++| .+|. ++++.-..+.|...++....
T Consensus 263 ~~~~~-~ap~G~~~-~~G~-l~v~~~~~~~v~~v~~~~~~ 299 (352)
T 2ism_A 263 FWPQG-FPPGNLAF-FRGD-LYVAGLRGQALLRLVLEGER 299 (352)
T ss_dssp ECTTC-CCEEEEEE-ETTE-EEEEETTTTEEEEEEEEEET
T ss_pred ecCCC-CCCcceEE-ECCE-EEEEECCCCEEEEEEECCCC
Confidence 33223 23556777 4565 56666667788888776543
No 329
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.55 E-value=0.29 Score=41.34 Aligned_cols=143 Identities=12% Similarity=0.145 Sum_probs=84.7
Q ss_pred CCcEEEEEcccCCCccceeee-----cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCC-C--CCCccEEEee
Q 018293 187 DRSVVMKDARISTHSGFKWAV-----AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS-T--SQQSSFTLHA 258 (358)
Q Consensus 187 dg~i~i~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~-~--~~~~~~~~~~ 258 (358)
++.||.-++....... .... ...+..+..+|++ .+++.. .+..|.|-.+..+...... . .....+.+.-
T Consensus 40 ~n~iR~~~i~~~~~Yk-~L~~~~~i~f~~i~qlvlSpsG-~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l 116 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYH-SLNFSRHLVLDDTFHVISSTSG-DLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSI 116 (452)
T ss_dssp TTEEEEEETTTCSSCE-EEECTTTCCCCTTCEEEECTTS-SEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEG
T ss_pred CCEEEEEECCCCCcce-EEecCcccccCceeEEEECCCC-CEEEEe-cCCeEEEEEecCccccCcccccccccceeEEEc
Confidence 4667766766433222 2222 2257889999955 466655 4568999998844222110 0 0011222222
Q ss_pred ------cCCceeEEEecCCCC--cEEEEEeCCCcEEEEecCCCCceee--------EecCCCCceeEEEEEcCCCCeEEE
Q 018293 259 ------HDKAVCTISYNPLVP--NLLATGSTDKMVKLWDLSNNQPSCI--------ASRNPKAGAVFSVAFSEDSPFVLA 322 (358)
Q Consensus 259 ------~~~~i~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~l~ 322 (358)
...+|..+.|+|-+. ..|++-..|+.|++||+......+. +........|.+++|.+++-. |.
T Consensus 117 ~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lT-LY 195 (452)
T 3pbp_A 117 DEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLT-LY 195 (452)
T ss_dssp GGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSC-EE
T ss_pred CCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcE-EE
Confidence 246799999999653 4889999999999999986322122 122223356889999997754 44
Q ss_pred EE--ccCCeEEEE
Q 018293 323 IG--GSKGKLEIW 333 (358)
Q Consensus 323 ~~--~~dg~i~vw 333 (358)
.. ..+|.|+-.
T Consensus 196 vl~~t~~GDIYAl 208 (452)
T 3pbp_A 196 CLNTTEGGDIFAF 208 (452)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEecCCCCCEEEE
Confidence 43 366776543
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.53 E-value=0.17 Score=38.49 Aligned_cols=178 Identities=9% Similarity=0.044 Sum_probs=90.7
Q ss_pred CcEEEEEEcCCeEEEEECCCCce------eeeecc-cccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceeee
Q 018293 135 RNILASASADKQVKIWDVAAGKC------NLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV 207 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~~~------~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 207 (358)
..+|+....| +++.=.+.++.. ..++.. .=..+..++|+|++ .+.++ .+|.+.-.+..+...... ...
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W-~~s 78 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNW-MGR 78 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCH-HHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccc-ccc
Confidence 4567777777 666554444431 112211 12467899999987 54444 677766666544322211 111
Q ss_pred cCC--------eeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCc-cEEE-eecCCceeEEEecCCCCcEEE
Q 018293 208 AAD--------VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS-SFTL-HAHDKAVCTISYNPLVPNLLA 277 (358)
Q Consensus 208 ~~~--------i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~-~~~~~~i~~i~~~~~~~~~l~ 277 (358)
... ..++.|+|++ .+.++ .||.|+-++..+..... ..- -..+ ..-=..+..|.+.|+| .+.+
T Consensus 79 ~t~IG~~Gw~~F~a~~fD~~G-~LYav--~dG~iyr~~pP~~~~~~----Wl~~a~~vg~~gw~~~~~lff~p~G-~Lya 150 (236)
T 1tl2_A 79 AKKIGNGGWNQFQFLFFDPNG-YLYAV--SKDKLYKASPPQSDTDN----WIARATEVGSGGWSGFKFLFFHPNG-YLYA 150 (236)
T ss_dssp CEEEECSCGGGCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCC----HHHHSEEEECSSGGGEEEEEECTTS-CEEE
T ss_pred ccEecccccccceEEEECCCC-CEEEe--CCCEEEEeCCCcCCCCc----eeccccEeccCCCCceEEEEECCCc-eEEE
Confidence 122 4788999954 34444 66988877653321100 000 0111 1111467999999998 5554
Q ss_pred EEeCCCcEEEEecCCCCc-----eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeE
Q 018293 278 TGSTDKMVKLWDLSNNQP-----SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKL 330 (358)
Q Consensus 278 ~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 330 (358)
+. |+.++-.......- .........-..-..+.|.+++. +++.. +|.+
T Consensus 151 v~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g~~ 203 (236)
T 1tl2_A 151 VH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GGKF 203 (236)
T ss_dssp EE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TTEE
T ss_pred Ee--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc-EEEEe--CCeE
Confidence 44 77754333322110 00111112222344577999997 45443 6743
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.0084 Score=49.37 Aligned_cols=193 Identities=10% Similarity=0.024 Sum_probs=101.4
Q ss_pred cEEEEEEcCCeEEEEECCCCceeeeecccc-cceeeEEE--cCCCCcEEEEE-eCCCcEEEEEcccCCCccceeeecCCe
Q 018293 136 NILASASADKQVKIWDVAAGKCNLTLEHHT-DKVQAVAW--NHHSPQILLSG-SFDRSVVMKDARISTHSGFKWAVAADV 211 (358)
Q Consensus 136 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i 211 (358)
.+++.++.||.|.-.|.++|+.+.+++... .++....- .+.+...++.. +.||.|..++..++.... .......+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~-~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL-PLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE-EEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe-eeccccce
Confidence 378899999999999999999998887541 22222110 01121333333 579999999987663321 11111111
Q ss_pred e--eEEEc-------C---CCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecC--Cc-----eeEEEec---
Q 018293 212 E--SLAWD-------P---HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD--KA-----VCTISYN--- 269 (358)
Q Consensus 212 ~--~~~~~-------~---~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~-----i~~i~~~--- 269 (358)
. -+... + ..+..+++|+.+|.+...|++++ +.+..+.... .. ..|....
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG---------~~~W~~~~~~~~~~~~~~~e~~~~~~d~~ 160 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG---------EIISAFGPGSKNGYFGSQSVDCSPEEKIK 160 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC---------CEEEEESTTCBCC----------------
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC---------cEEEEEecCCCcccccccccccccccccc
Confidence 0 01110 0 02347899999999999999998 5555554321 10 0111111
Q ss_pred C-CCCcEEEEEeCCCcEEEEecCCCCceeeEec---CCC--Ccee-EEEEEcCCCCeEEEEEccCCeEEEEEccCCCccc
Q 018293 270 P-LVPNLLATGSTDKMVKLWDLSNNQPSCIASR---NPK--AGAV-FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 342 (358)
Q Consensus 270 ~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~--~~~v-~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 342 (358)
. ..+..++.+..+..+.+.+ ++++. -...+ ... ..++ .+-..+.++.+ + .++.||.|.-+|..+|+.+-
T Consensus 161 ~d~~~~~v~ig~~~y~v~~~~-~sG~~-W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~-~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 161 LQECENMIVIGKTIFELGIHS-YDGAS-YNVTYSTWQQNVLDVPLALQNTFSKDGMC-I-APFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp ----CCEEEEEEEEEECEECC-TTSCC-CCCEEEEEECCTTTHHHHTTCSSCSSSCC-E-EEETTTEEEEECSTTCCEEE
T ss_pred cccCCCeEEEecceEEEEEEC-CCCCe-EEEecccccccccccccccccccccCCcE-E-EECCCCEEEEEECCCCcEEE
Confidence 0 1124677777777777766 34431 11110 000 0000 00011234663 3 36788999999888887654
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.44 E-value=0.11 Score=39.60 Aligned_cols=101 Identities=7% Similarity=0.014 Sum_probs=58.7
Q ss_pred cEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccc--------eeeEEEcCCCCcEEEEEeCCCcEEEEEc
Q 018293 124 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDK--------VQAVAWNHHSPQILLSGSFDRSVVMKDA 195 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 195 (358)
.+..++|+|+ +.+.+. .+|.+.-.+..+.....-+. .... ..++.|.|++ .+.++ .||.|.-++-
T Consensus 42 ~~~~laf~P~-G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G-~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPG-GELYGV--LNDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDPNG-YLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTT-SCEEEE--ETTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECTTS-CEEEE--ETTEEEEESC
T ss_pred cceeEEECCC-ccEEEE--eCCeEEEECCCCCCcccccc-cccEecccccccceEEEECCCC-CEEEe--CCCEEEEeCC
Confidence 5669999997 555554 77877766654432211111 1112 4788999998 54444 5699888775
Q ss_pred ccCCCcccee---e----ecCCeeeEEEcCCCCCeEEEEecCCeEE
Q 018293 196 RISTHSGFKW---A----VAADVESLAWDPHAEHSFVVSLEDGTIK 234 (358)
Q Consensus 196 ~~~~~~~~~~---~----~~~~i~~~~~~~~~~~~~~~~~~dg~i~ 234 (358)
-+........ . .-..+..+.+.|++ .+.++. |+.++
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~ly 157 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQFY 157 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEEEE--TTEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCc-eEEEEe--CCcEE
Confidence 3332221100 1 11467899999954 344444 88754
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.43 E-value=0.4 Score=41.46 Aligned_cols=110 Identities=12% Similarity=0.187 Sum_probs=57.6
Q ss_pred cceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccceee---------ecCCeeeEEEcCC---CCCeEEEEec----
Q 018293 166 DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA---------VAADVESLAWDPH---AEHSFVVSLE---- 229 (358)
Q Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---------~~~~i~~~~~~~~---~~~~~~~~~~---- 229 (358)
.....|+|.|+| +++++-...+.|++++..++.... ... .......++|+|+ ++.++++-+.
T Consensus 27 ~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~-~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKT-VFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEE-EEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeE-EecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 346799999999 666554433468888764433211 111 2345668999995 4544444332
Q ss_pred --------CCeEEEEEcccCCCCCCCCCCCccEE-Eee-cCCceeEEEecCCCCcEEEEEe
Q 018293 230 --------DGTIKGFDIRTAKSDPDSTSQQSSFT-LHA-HDKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 230 --------dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~-~~~~i~~i~~~~~~~~~l~~~~ 280 (358)
...|.-|+........ ...+.+.. +.. .......|+|.|+| .+.++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~--~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTL--EKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEE--EEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCc--CCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEEC
Confidence 2345556554321000 00011111 211 12346889999998 5555543
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.40 E-value=0.41 Score=41.36 Aligned_cols=58 Identities=12% Similarity=0.113 Sum_probs=32.2
Q ss_pred cEEEEEeCCCcEEEEecCC-CCcee--eEecCCCCceeEEEEEcCCCCeEEEEEccCCeEE
Q 018293 274 NLLATGSTDKMVKLWDLSN-NQPSC--IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLE 331 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~d~~~-~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 331 (358)
.+++..-..+.|....+.. +.... ...+......+..|++.|||..|+++-+..|.+.
T Consensus 370 ~lfv~~~~~~~i~~v~l~~~g~~~~~~~~~~~~~~~R~~dv~~gpDG~~Lyv~~d~~G~i~ 430 (454)
T 1cru_A 370 TLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFKSNNRYRDVIASPDGNVLYVLTDTAGNVQ 430 (454)
T ss_dssp EEEEEBSSSCCEEEEEECTTSSSEEEEEEEESCCSSCEEEEEECTTSSCEEEEECSSCCEE
T ss_pred cEEEeecCCCEEEEEEECCCCCeeeeeeeeecccCCCceeEEECCCCCEEEEEECCCCCCc
Confidence 3455444466677777764 22111 1122222368999999999962355445556554
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.38 E-value=0.63 Score=43.27 Aligned_cols=191 Identities=10% Similarity=0.093 Sum_probs=108.2
Q ss_pred cccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc
Q 018293 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS 201 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 201 (358)
...|.++.-..+ + .|..|+.+| +..||..+.+...........|.++.. .++ .+..++.+ .+..+|..+.+..
T Consensus 62 ~~~i~~i~~d~~-g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g--~lWigt~~-Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 62 NTRIYCGVIIDN-T-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD--TLWLGALN-GLYTYQLQSRKLT 134 (758)
T ss_dssp SSCEEEEEEETT-T-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT--EEEEEETT-EEEEEETTTCCEE
T ss_pred CceEEEEEEcCC-C-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC--cEEEEcCC-cceeEeCCCCeEE
Confidence 356888877766 3 566666655 789998776433211112234666654 344 45556655 5778887654432
Q ss_pred ccee----eecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe--e----cCCceeEEEecCC
Q 018293 202 GFKW----AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--A----HDKAVCTISYNPL 271 (358)
Q Consensus 202 ~~~~----~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~----~~~~i~~i~~~~~ 271 (358)
.... .....|.++....++ .+..|+.+ -+..||..+.. ...+. . ....|.++...++
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g--~lWigt~~-Gl~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~i~~d~~ 201 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDN--QIYVGTYN-GLCRYIPSNGK----------FEGIPLPVHSSQSNLFVNSLLEDTT 201 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTC--CEEEEETT-EEEEEETTTTE----------EEEECCCCCTTCSSCCEEEEEEETT
T ss_pred EeccCCCCcCCCeEEEEEEcCCC--CEEEEeCC-CHhhCccCCCc----------eEEecCCCccccccceeEEEEEECC
Confidence 1100 112457777776633 45556654 47778876541 11111 0 1224788887776
Q ss_pred CCcEEEEEeCCCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 272 VPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 272 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
+ ..|..|+. +-+..+|..+++....... ....|.++...++|. +.+ |+. +-+.+++..+++
T Consensus 202 ~-~~lWigt~-~Gl~~~~~~~~~~~~~~~l--~~~~i~~i~~d~~g~-lWi-gT~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 202 R-QCVWIGTE-GYLFQYFPSTGQIKQTEAF--HNNSIKSLALDGNGD-LLA-GTD-NGLYVYHNDTTP 262 (758)
T ss_dssp T-TEEEEEEE-EEEEEEETTTTEEEEEEEE--EEEEEEEEEECTTCC-EEE-EET-TEEEEECCTTSC
T ss_pred C-CEEEEEEC-CCCeEEcCCCCeEEeccCC--CCCeEEEEEEcCCCC-EEE-EeC-CceeEEecCCCc
Confidence 5 54555554 4588899877653222222 234688888888887 344 444 457888876543
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.36 E-value=0.53 Score=46.36 Aligned_cols=237 Identities=9% Similarity=0.108 Sum_probs=124.4
Q ss_pred ccCCCcEEEEEEecCCCceEEEEEEeccCCCCCceEeeceeecCCcccceeeecCCccccCCCceEEecCCCCeEEEEEc
Q 018293 3 INPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDL 82 (358)
Q Consensus 3 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~vw~~ 82 (358)
++|..++++.-. .. .+.+|+.... .....|. ++..+.--+|+ +++ .|+-.+ +..|+-|++
T Consensus 73 MnP~~~iiALra-g~-----~lQiFnl~~k---~klks~~--~~e~VvfWkWi------s~~--~l~lVT-~~aVyHW~~ 132 (1630)
T 1xi4_A 73 MNPASKVIALKA-GK-----TLQIFNIEMK---SKMKAHT--MTDDVTFWKWI------SLN--TVALVT-DNAVYHWSM 132 (1630)
T ss_pred cCCCcceEEEec-CC-----eEEEeehHHh---hhhcccc--cCCCceEEEec------CCC--eeEEEc-CCeEEEecc
Confidence 688888777763 32 5666666543 1122221 33445567786 233 343333 458999999
Q ss_pred ccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE------cCCeEEEEECCCCc
Q 018293 83 DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS------ADKQVKIWDVAAGK 156 (358)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~ 156 (358)
.... .|..++. ....+. ...|..-..+++...++++|- -.|.+.+|..+.+
T Consensus 133 ~~~s--~P~k~fd------------------R~~~L~--~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~- 189 (1630)
T 1xi4_A 133 EGES--QPVKMFD------------------RHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK- 189 (1630)
T ss_pred CCCC--ccHHHHh------------------cchhcc--cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-
Confidence 6411 1111110 000111 355777777777443444442 3588999997754
Q ss_pred eeeeecccccceeeEEEc--CCCCcEEEEEeC---CCcEEEEEcccC---CCcc------ceee---ecCCeeeEEEcCC
Q 018293 157 CNLTLEHHTDKVQAVAWN--HHSPQILLSGSF---DRSVVMKDARIS---THSG------FKWA---VAADVESLAWDPH 219 (358)
Q Consensus 157 ~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~---dg~i~i~d~~~~---~~~~------~~~~---~~~~i~~~~~~~~ 219 (358)
..+.+.+|......+... +....+++.+.. .+.+.+.++... .... .... ...-..++..++.
T Consensus 190 ~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k 269 (1630)
T 1xi4_A 190 VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 269 (1630)
T ss_pred cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccc
Confidence 455667776655444442 222133333322 378999888543 1100 0011 1223455666664
Q ss_pred CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCC
Q 018293 220 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 293 (358)
Q Consensus 220 ~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~ 293 (358)
...+..-+.-|.+.+||+.++ .+++.-+-...+|...+.++..+. ++.....|.|.--.+...
T Consensus 270 -~g~iy~itk~G~~~~~d~~t~---------~~i~~~ris~~~iF~~~~~~~~~g-~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 270 -HDVVFLITKYGYIHLYDLETG---------TCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred -cCEEEEEecCceEEEEecccc---------hhhhhccccCCceEEeccCCCCCc-eEEEcCCceEEEEEEccc
Confidence 347788889999999999998 444444434444444444433312 333335566555555443
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.24 E-value=0.14 Score=47.02 Aligned_cols=197 Identities=10% Similarity=0.138 Sum_probs=97.0
Q ss_pred CcEEEEEEcC----CeEEEEECCCCceeeee-c------ccccceeeEEEcC-CCCcEEEEEeCCC------cEEEEEcc
Q 018293 135 RNILASASAD----KQVKIWDVAAGKCNLTL-E------HHTDKVQAVAWNH-HSPQILLSGSFDR------SVVMKDAR 196 (358)
Q Consensus 135 ~~~l~s~~~d----g~v~iwd~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~~l~~~~~dg------~i~i~d~~ 196 (358)
+.+++.|+.+ ..+.+||..+++-...- . .....-.+++..+ ++ .+++.|+.++ .+.+||..
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEECCBSSTTCBCCCCEEEETT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC-EEEEEcCCCCCCCccccEEEEeCC
Confidence 4577777753 46889998877533221 1 0111112333333 55 6777777543 47788877
Q ss_pred cCCCccce-eeecCCeeeEEEcCCCCCeEEEEecCC--eEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCC
Q 018293 197 ISTHSGFK-WAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 273 (358)
Q Consensus 197 ~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 273 (358)
+.+-.... ......-.+++... ++.+++.|+.++ .+.+||..+..-........ .........++.+....+
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~----~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDE----FFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSG----GGGSCCBSCEEEEETTTT
T ss_pred CCcEEECCCCCCCcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCC----CCCcccceeEEEEeCCCC
Confidence 64321100 00111112222222 455777777654 68999987652110000000 111111223355555423
Q ss_pred cEEEEEeC--C-----CcEEEEecCCCC------ceeeEecC-CCCceeEEEEEcCCCCeEEEEEccC--------CeEE
Q 018293 274 NLLATGST--D-----KMVKLWDLSNNQ------PSCIASRN-PKAGAVFSVAFSEDSPFVLAIGGSK--------GKLE 331 (358)
Q Consensus 274 ~~l~~~~~--d-----g~i~i~d~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~ 331 (358)
.+++.|+. + ..+.+||+.+.. ...+.... ...... +++...++. +++.||.+ ..+.
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRK-LLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTE-EEEECCBCSSCCCCTTTSEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCE-EEEECCccCCCCCCCCCeEE
Confidence 67777765 2 358899998877 22222211 111111 223333355 67778743 4589
Q ss_pred EEEccCCC
Q 018293 332 IWDTLSDA 339 (358)
Q Consensus 332 vw~~~~~~ 339 (358)
+||+.+.+
T Consensus 630 ~yd~~t~~ 637 (695)
T 2zwa_A 630 SLDPLSET 637 (695)
T ss_dssp EEETTTTE
T ss_pred EEECCCCe
Confidence 99987653
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.19 E-value=0.36 Score=44.32 Aligned_cols=154 Identities=12% Similarity=0.181 Sum_probs=78.6
Q ss_pred CcEEEEEEcCC------eEEEEECCCCceee--eecccccceeeEEEcCCCCcEEEEEeCCC--cEEEEEcccCCCccce
Q 018293 135 RNILASASADK------QVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFDR--SVVMKDARISTHSGFK 204 (358)
Q Consensus 135 ~~~l~s~~~dg------~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~ 204 (358)
+.+++.|+.++ .+.+||..+.+-.. .+..... -.+++...++ .+++.|+.++ .+.+||..+..-....
T Consensus 452 ~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~-~h~~~~~~~~-~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 452 NQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF-RHSACSLPDG-NVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB-SCEEEECTTS-CEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc-cceEEEEcCC-EEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 55777776543 58889988754322 2221111 1223332355 7788887655 6889998765321111
Q ss_pred -----eeecCCeeeEEEcCCCCCeEEEEec--C-----CeEEEEEcccCCCCCCCCCCCccEEEee---cCCceeEEEec
Q 018293 205 -----WAVAADVESLAWDPHAEHSFVVSLE--D-----GTIKGFDIRTAKSDPDSTSQQSSFTLHA---HDKAVCTISYN 269 (358)
Q Consensus 205 -----~~~~~~i~~~~~~~~~~~~~~~~~~--d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~---~~~~i~~i~~~ 269 (358)
........++.+....+.+++.|+. + ..+.+||+.+..- ... .....+.. ....-.+++..
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w-~~~---~~W~~~~~~p~~~R~~~~~~~~ 605 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENA-TEP---ITVIKKLQHPLFQRYGSQIKYI 605 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCS-SCC---EEEEEEEECGGGCCBSCEEEEE
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCcc-ccc---eEEEEcCCCCCCCcccceEEEe
Confidence 0011122335555533556777765 2 4688999987631 000 00111111 11111223333
Q ss_pred CCCCcEEEEEeC--------CCcEEEEecCCCCc
Q 018293 270 PLVPNLLATGST--------DKMVKLWDLSNNQP 295 (358)
Q Consensus 270 ~~~~~~l~~~~~--------dg~i~i~d~~~~~~ 295 (358)
.++ .+++.|+. ...+.+||+.+.+.
T Consensus 606 ~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 606 TPR-KLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp ETT-EEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred CCC-EEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 324 67777774 34599999988764
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.16 E-value=0.41 Score=38.99 Aligned_cols=101 Identities=16% Similarity=0.163 Sum_probs=50.4
Q ss_pred CcEEEEEEcC-------CeEEEEECCCCceeee--ecccccceeeEEEcCCCCcEEEEEeC------CCcEEEEEcccCC
Q 018293 135 RNILASASAD-------KQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSF------DRSVVMKDARIST 199 (358)
Q Consensus 135 ~~~l~s~~~d-------g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~ 199 (358)
+.+++.|+.+ ..+.+||+.+.+-... +...... .+++. .++ .+++.|+. -..+.+||+.+.+
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE-ETT-EEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE-ECC-EEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 5577777764 3588899887643221 2111111 11222 244 66666654 2358888987653
Q ss_pred Cccce--eeecCCeeeEEEcCCCCCeEEEEecC-----CeEEEEEcccC
Q 018293 200 HSGFK--WAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTA 241 (358)
Q Consensus 200 ~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~ 241 (358)
-.... ........++.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 187 W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIH---KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp EEEECCCSSCCBSCEEEEE---TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred EEECCCCCCCcccceEEEE---CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 21110 001111122222 34567776543 35778888765
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.66 E-value=0.75 Score=38.00 Aligned_cols=61 Identities=8% Similarity=0.076 Sum_probs=33.2
Q ss_pred CeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEE
Q 018293 210 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLAT 278 (358)
Q Consensus 210 ~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~ 278 (358)
....++|.. +.+++.....+.|....+...... ......+......+..++..|+| .++++
T Consensus 264 ap~G~~~~~--g~~~~~~l~~~~l~~v~~~~~~~~-----~~~e~~l~~~~gR~~dv~~~pDG-~lyv~ 324 (347)
T 3das_A 264 SPSGIAYAE--GSVWMAGLRGERLWRIPLKGTAAA-----ADPQAFLEGEYGRLRTVAPAGGD-KLWLV 324 (347)
T ss_dssp CEEEEEEET--TEEEEEESTTCSEEEEEEETTEES-----SCCEEESTTTSSCEEEEEEEETT-EEEEE
T ss_pred CCcceEEEc--CceeeccccCCEEEEEEecCCcee-----cceEEeecCCCCCccEEEECCCC-cEEEE
Confidence 445666654 345565556666766666544210 01122223334668889999988 44443
No 341
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.58 E-value=0.73 Score=37.31 Aligned_cols=174 Identities=7% Similarity=-0.006 Sum_probs=84.6
Q ss_pred ecCCCCCcEEEEEE--cCC--eEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccce
Q 018293 129 AWNKEFRNILASAS--ADK--QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 204 (358)
Q Consensus 129 ~~~~~~~~~l~s~~--~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 204 (358)
.|++++. .|+-.. .++ .|..-++.. .....+..+.. ..+++++..+..+......|...++....... .
T Consensus 110 ~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~-l 182 (302)
T 3s25_A 110 YASLIGN-YIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL-F 182 (302)
T ss_dssp EEEEETT-EEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE-E
T ss_pred EEEEeCC-EEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE-E
Confidence 5566744 555444 334 455555543 33344433322 34567774444443336678777776554322 1
Q ss_pred eeecCCeeeEEEcCCCCCeEEEEecC-CeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEe--C
Q 018293 205 WAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--T 281 (358)
Q Consensus 205 ~~~~~~i~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~--~ 281 (358)
. ..... ..+.|+++.++.+...+ ..|..-++... ....+.. ..+ ..|+|++ .+|+-+. .
T Consensus 183 ~--~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~----------~~~~Lt~--~~~--~~~~~~g-~~Iy~~~~~~ 244 (302)
T 3s25_A 183 Y--DCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP----------NPVVLTE--ANI--EHYNVYG-SLIFYQRGGD 244 (302)
T ss_dssp E--CSCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC----------CCEECSC--SCE--EEEEEET-TEEEEEECSS
T ss_pred e--CCCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC----------CeEEEeC--CCc--ceEEECC-CEEEEEECCC
Confidence 1 22222 33558666555554333 35555555443 1222221 223 3367777 5555442 2
Q ss_pred CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEE
Q 018293 282 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 334 (358)
Q Consensus 282 dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~ 334 (358)
.+.|..-++.......+.. . .+. .+++.+.+++.+--..+.|..-+
T Consensus 245 ~~~i~~~~~DG~~r~~l~~--~---~~~--~i~i~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 245 NPALCVVKNDGTGFKELAK--G---EFC--NINVTSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp SCEEEEEETTSCCCEEEEE--S---CEE--EEEECSSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCccEEeeC--C---ccc--eEEEeCCEEEEEECCCCeEEEEE
Confidence 4567777776654333322 1 233 34456666666655556655444
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.37 E-value=1.7 Score=40.29 Aligned_cols=185 Identities=11% Similarity=0.191 Sum_probs=101.1
Q ss_pred cEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeec-----ccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC
Q 018293 124 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE-----HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 198 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 198 (358)
.|.++.. .+ + .|..++.+ -+..+|..+++.. .+. .....|.++...+++ .+. .++.+ -+..+|..+.
T Consensus 104 ~i~~i~~-~~-g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g-~lW-igt~~-Gl~~~~~~~~ 175 (758)
T 3ott_A 104 DVRTMAL-QG-D-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDN-QIY-VGTYN-GLCRYIPSNG 175 (758)
T ss_dssp CEEEEEE-ET-T-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTC-CEE-EEETT-EEEEEETTTT
T ss_pred eEEEEEe-cC-C-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCC-CEE-EEeCC-CHhhCccCCC
Confidence 4666654 34 3 45556665 5888898766533 221 113457788777776 444 45554 4777776654
Q ss_pred CCccceee-----ecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCC
Q 018293 199 THSGFKWA-----VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 273 (358)
Q Consensus 199 ~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 273 (358)
+....... ....|.++...+++ ..+..|+. +-+..+|..+... .....+ ....|.++...+++
T Consensus 176 ~~~~~~~~~~~~~~~~~i~~i~~d~~~-~~lWigt~-~Gl~~~~~~~~~~-------~~~~~l--~~~~i~~i~~d~~g- 243 (758)
T 3ott_A 176 KFEGIPLPVHSSQSNLFVNSLLEDTTR-QCVWIGTE-GYLFQYFPSTGQI-------KQTEAF--HNNSIKSLALDGNG- 243 (758)
T ss_dssp EEEEECCCCCTTCSSCCEEEEEEETTT-TEEEEEEE-EEEEEEETTTTEE-------EEEEEE--EEEEEEEEEECTTC-
T ss_pred ceEEecCCCccccccceeEEEEEECCC-CEEEEEEC-CCCeEEcCCCCeE-------EeccCC--CCCeEEEEEEcCCC-
Confidence 32111111 11237777776633 35566664 4588888765411 111111 23457888887766
Q ss_pred cEEEEEeCCCcEEEEecCCCCceeeEecC-----CCCceeEEEEEcCCCCeEEEEEccCCeEEEE
Q 018293 274 NLLATGSTDKMVKLWDLSNNQPSCIASRN-----PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 333 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw 333 (358)
. |..|+.+ -+.+++..+.+........ -....|.++....+|. +.+ |+..| +.++
T Consensus 244 ~-lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWi-GT~~G-l~~~ 303 (758)
T 3ott_A 244 D-LLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWL-GTDYG-ISLS 303 (758)
T ss_dssp C-EEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEE-EESSS-EEEE
T ss_pred C-EEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEE-EeCCc-cccc
Confidence 3 4445544 5888888766532211110 1234588998888887 343 45556 4443
No 343
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.74 E-value=1.3 Score=35.73 Aligned_cols=161 Identities=6% Similarity=-0.025 Sum_probs=78.7
Q ss_pred CeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEe--CC--CcEEEEEcccCCCccceeeecCCeeeEEEcCCC
Q 018293 145 KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGS--FD--RSVVMKDARISTHSGFKWAVAADVESLAWDPHA 220 (358)
Q Consensus 145 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d--g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 220 (358)
..|+..++..++... +.. .. +..|++++ ..|+-.. .+ ..|...++....... .... .+ ..+++++
T Consensus 88 ~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g-~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~-lt~~--~~--~~~~~~g 156 (302)
T 3s25_A 88 NSLCRIKRNGHGSTV-LDP--DP--CIYASLIG-NYIYYLHYDTQTATSLYRIRIDGEEKKK-IKNH--YL--FTCNTSD 156 (302)
T ss_dssp EEEEEEETTSCCCEE-EEC--SC--EEEEEEET-TEEEEEEESSSSCEEEEEEETTSCCCEE-EESS--CC--CCSEEET
T ss_pred CeEEEEeCCCCcceE-eec--CC--ccEEEEeC-CEEEEEeecCCCCceEEEEECCCCCeEE-EeCC--Cc--eEeeEEC
Confidence 367777776654322 221 11 23667777 4555544 33 445555554333222 2222 22 3456666
Q ss_pred CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC-C-CcEEEEecCCCCceee
Q 018293 221 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-D-KMVKLWDLSNNQPSCI 298 (358)
Q Consensus 221 ~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~ 298 (358)
+.++.+......|...++... .. ..+.. +... ..+.|++ .+|+-... + ..|..-++......
T Consensus 157 ~~iy~t~~g~~~Iy~~~l~g~---------~~-~~l~~--~~~~-~~~~P~g-~~iy~t~~~~~~~I~~~~ldG~~~~-- 220 (302)
T 3s25_A 157 RYFYYNNPKNGQLYRYDTASQ---------SE-ALFYD--CNCY-KPVVLDD-TNVYYMDVNRDNAIVHVNINNPNPV-- 220 (302)
T ss_dssp TEEEEECTTTCCEEEEETTTT---------EE-EEEEC--SCEE-EEEEEET-TEEEEEEGGGTTEEEEECSSSCCCE--
T ss_pred CEEEEEeCCCceEEEEECCCC---------CE-EEEeC--CCcc-ceeeecC-CEEEEEEcCCCcEEEEEECCCCCeE--
Confidence 655556554667777777654 21 22211 2222 3356887 45544433 2 35666676665532
Q ss_pred EecCCCCceeEEEEEcCCCCeEEEEE-ccCCeEEEEEccC
Q 018293 299 ASRNPKAGAVFSVAFSEDSPFVLAIG-GSKGKLEIWDTLS 337 (358)
Q Consensus 299 ~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~vw~~~~ 337 (358)
.+.. ..+ ..|+|++..++.+. ...+.|..-++..
T Consensus 221 -~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 221 -VLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp -ECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred -EEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 2221 223 23777787655442 2235566555543
No 344
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.38 E-value=1.9 Score=35.81 Aligned_cols=209 Identities=11% Similarity=0.050 Sum_probs=105.9
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCc-eeeeec---ccccceeeEEEcCC---CCcEEEEEeC---C----C
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-CNLTLE---HHTDKVQAVAWNHH---SPQILLSGSF---D----R 188 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~l~~~~~---d----g 188 (358)
.....++|.|+ +. |+.+..+|.|.+++ .+++ .+..+. ........|+++|+ +..++++-+. + .
T Consensus 29 ~~P~~ia~~pd-G~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGG-GR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEET-TE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCC-Ce-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 45789999999 54 55566779999997 4454 222211 12345789999997 4244444332 3 5
Q ss_pred cEEEEEcccCC--C--cc-ceeee----cCCeeeEEEcCCCCCeEEEEec-------------CCeEEEEEcccCCCCCC
Q 018293 189 SVVMKDARIST--H--SG-FKWAV----AADVESLAWDPHAEHSFVVSLE-------------DGTIKGFDIRTAKSDPD 246 (358)
Q Consensus 189 ~i~i~d~~~~~--~--~~-~~~~~----~~~i~~~~~~~~~~~~~~~~~~-------------dg~i~i~d~~~~~~~~~ 246 (358)
.|..++..... . .. ..... ......++|.|++ .++++.+. .|.|.-++....-. ..
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p-~~ 183 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP-AD 183 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC-TT
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC-CC
Confidence 67777765431 0 00 01111 1235679999966 45554322 24555555432100 00
Q ss_pred CCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC---cEEEEecCC--------C------CceeeEecCCCCceeE
Q 018293 247 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---MVKLWDLSN--------N------QPSCIASRNPKAGAVF 309 (358)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg---~i~i~d~~~--------~------~~~~~~~~~~~~~~v~ 309 (358)
........-..++.. ...++|+|+.+.++++-...+ .|.+..... + -......+........
T Consensus 184 npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 184 NPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp SSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 000011111233433 468999994325555533222 243332111 0 0012223311223567
Q ss_pred EEEEc-------CCCCeEEEEEccCCeEEEEEccCC
Q 018293 310 SVAFS-------EDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 310 ~~~~~-------~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
.++|. .+|. ++++.-..+.|...++...
T Consensus 263 G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp EEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECGG
T ss_pred ceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECCC
Confidence 78883 4665 5666666778888888753
No 345
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.18 E-value=2.1 Score=35.54 Aligned_cols=61 Identities=13% Similarity=0.179 Sum_probs=34.6
Q ss_pred CeeeEEEcCC------CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEE-eecCCceeEEEecCCCCcEEEE
Q 018293 210 DVESLAWDPH------AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLAT 278 (358)
Q Consensus 210 ~i~~~~~~~~------~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~ 278 (358)
.+..+.|... .+.++++....+.|...++..... .....+ ......+..+++.|+| .++++
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~~rp~~v~~~pdG-~lyv~ 339 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKV-------TEDGRILTDRGQRIRDVRTGPDG-YLYVL 339 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEE-------EEEEEESGGGCCCEEEEEECTTS-CEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeE-------eeeEEcccCCCCceeEEEECCCC-cEEEE
Confidence 4566777542 244666666677888888774310 001111 1223468899999998 54443
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.50 E-value=2.7 Score=34.55 Aligned_cols=104 Identities=7% Similarity=0.025 Sum_probs=55.4
Q ss_pred CcEEEEEEcCCeEEEEECCCCceeeeeccccc--c-----eeeEEEc---C-CCCcEEEEEeCCCcEEEEEcccCCCccc
Q 018293 135 RNILASASADKQVKIWDVAAGKCNLTLEHHTD--K-----VQAVAWN---H-HSPQILLSGSFDRSVVMKDARISTHSGF 203 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~-----v~~~~~~---~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 203 (358)
+..+++|+.+|.+...|+.+|+.+..+..... . ..|.... . .....++.+..+..+.+.+ ++++ .-.
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~ 188 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYN 188 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSC-CCC
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eEE
Confidence 34789999999999999999999988863211 0 0111110 0 1114566777777777666 3332 110
Q ss_pred e-ee-ecC-Cee-----eEEEcCCCCCeEEEEecCCeEEEEEcccCC
Q 018293 204 K-WA-VAA-DVE-----SLAWDPHAEHSFVVSLEDGTIKGFDIRTAK 242 (358)
Q Consensus 204 ~-~~-~~~-~i~-----~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~ 242 (358)
. .. ... .+. .-.... ++ .+++++.||.|.-+|..++.
T Consensus 189 ~~~s~~~~~~~~~~~~~~~~~s~-Dg-~~~~~~~dg~v~A~d~~~G~ 233 (339)
T 2be1_A 189 VTYSTWQQNVLDVPLALQNTFSK-DG-MCIAPFRDKSLLASDLDFRI 233 (339)
T ss_dssp CEEEEEECCTTTHHHHTTCSSCS-SS-CCEEEETTTEEEEECSTTCC
T ss_pred Eeccccccccccccccccccccc-CC-cEEEECCCCEEEEEECCCCc
Confidence 0 00 000 000 000011 12 33557889999999888763
No 347
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.03 E-value=3.6 Score=34.61 Aligned_cols=155 Identities=13% Similarity=0.091 Sum_probs=74.9
Q ss_pred ccEEEEecCCCCCcEEEEEEcCC----eEEEEECCCCceeeeec------c--------cccceeeEEEcCCC-CcEEEE
Q 018293 123 DSVLGLAWNKEFRNILASASADK----QVKIWDVAAGKCNLTLE------H--------HTDKVQAVAWNHHS-PQILLS 183 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~------~--------~~~~v~~~~~~~~~-~~~l~~ 183 (358)
..|.+|++.|.+...+.++...| .|...+ ..++.-..+. . ....|.++++.|.. +..+.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 56999999983233454555554 343332 2232211111 0 11257788888742 355666
Q ss_pred EeCCCcEEEEEcccCC--Cccce----------------eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCC
Q 018293 184 GSFDRSVVMKDARIST--HSGFK----------------WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDP 245 (358)
Q Consensus 184 ~~~dg~i~i~d~~~~~--~~~~~----------------~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 245 (358)
+...+.|...+=.... ..... ......+.++.++|.++..++++..++.|... ....
T Consensus 134 g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s--~DgG--- 208 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES--TDAG--- 208 (394)
T ss_dssp EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE--SSTT---
T ss_pred EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE--CCCC---
Confidence 6655655443211111 11000 00123477899988555566666555544433 2221
Q ss_pred CCCCCCccEEEee-------------cCCceeEEEecCCCCcEEEEEeCCCcEEEEe
Q 018293 246 DSTSQQSSFTLHA-------------HDKAVCTISYNPLVPNLLATGSTDKMVKLWD 289 (358)
Q Consensus 246 ~~~~~~~~~~~~~-------------~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d 289 (358)
.....+.. ....+.++.+.|..+..|+++...+ |...+
T Consensus 209 -----~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~ 259 (394)
T 3b7f_A 209 -----TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD 259 (394)
T ss_dssp -----SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred -----CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence 11111100 0124788999987546777776554 44443
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.35 E-value=5 Score=34.67 Aligned_cols=73 Identities=8% Similarity=-0.040 Sum_probs=36.1
Q ss_pred CccEEEeecC-CceeEEEecCCC------CcEEEEEeCCCcEEEEecCCCCce-eeEec---------CCCCceeEEEEE
Q 018293 251 QSSFTLHAHD-KAVCTISYNPLV------PNLLATGSTDKMVKLWDLSNNQPS-CIASR---------NPKAGAVFSVAF 313 (358)
Q Consensus 251 ~~~~~~~~~~-~~i~~i~~~~~~------~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~---------~~~~~~v~~~~~ 313 (358)
.++..+..|. ..+..+.|.... +.+| .+...+.|....+...... ....+ ......+..+..
T Consensus 265 ~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f-~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~ 343 (463)
T 2wg3_C 265 PSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYV-FGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGE 343 (463)
T ss_dssp CCCEECCC----CEEEEEECCCSSCTTTTTCEE-EEETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEE
T ss_pred CCeEEeeCCCCccccceEEEeCCCChhhcceEE-EecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEE
Confidence 3444544332 467788775421 1244 4455577666665443211 11111 112357899999
Q ss_pred cCCCCeEEEEEc
Q 018293 314 SEDSPFVLAIGG 325 (358)
Q Consensus 314 ~~~~~~~l~~~~ 325 (358)
.|||. |+++..
T Consensus 344 ~pdG~-Lyv~~~ 354 (463)
T 2wg3_C 344 DELGE-VYILSS 354 (463)
T ss_dssp CTTCC-EEEEEE
T ss_pred CCCCC-EEEEec
Confidence 99998 555543
No 349
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.85 E-value=5.1 Score=33.64 Aligned_cols=99 Identities=9% Similarity=-0.001 Sum_probs=49.1
Q ss_pred cEEEEEEcCCeEEEEECCC-Cceeeee--cccccceeeEEEcCCCCcEEEEEeCCC----cEEEEEcccCCC---ccce-
Q 018293 136 NILASASADKQVKIWDVAA-GKCNLTL--EHHTDKVQAVAWNHHSPQILLSGSFDR----SVVMKDARISTH---SGFK- 204 (358)
Q Consensus 136 ~~l~s~~~dg~v~iwd~~~-~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~---~~~~- 204 (358)
..|..|...| +.+++... ++.-..+ ......|.+|++.|..+..+.++...| .|...+ ..++. ....
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccc
Confidence 3677777777 55555332 2211111 122457999999983334455555554 343322 11111 1100
Q ss_pred -ee---------ecCCeeeEEEcCCC-CCeEEEEecCCeEEEE
Q 018293 205 -WA---------VAADVESLAWDPHA-EHSFVVSLEDGTIKGF 236 (358)
Q Consensus 205 -~~---------~~~~i~~~~~~~~~-~~~~~~~~~dg~i~i~ 236 (358)
.. ....|.++++.|.+ ...+++++..+.|...
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 00 11246778888744 5567777666665543
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.41 E-value=5.8 Score=34.29 Aligned_cols=112 Identities=11% Similarity=0.143 Sum_probs=60.3
Q ss_pred CCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe---------ecCCceeEEEecCC---CCcEE
Q 018293 209 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---------AHDKAVCTISYNPL---VPNLL 276 (358)
Q Consensus 209 ~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~i~~~~~---~~~~l 276 (358)
.....|+|.|++...++++...|.|++++....... ..+..+. ........|+++|+ .+.+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~------~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lY 87 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFK------EPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLY 87 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCS------SCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeee------eeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEE
Confidence 456789999976535666678999999975422110 1111111 11456789999995 21343
Q ss_pred EEEeC--C----------CcEEEEecCCC--------CceeeEecC--CCCceeEEEEEcCCCCeEEEEEccC
Q 018293 277 ATGST--D----------KMVKLWDLSNN--------QPSCIASRN--PKAGAVFSVAFSEDSPFVLAIGGSK 327 (358)
Q Consensus 277 ~~~~~--d----------g~i~i~d~~~~--------~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d 327 (358)
++-+. + ..|.-|.+... ....+.... .....-..|+|.|||. |+++.+..
T Consensus 88 v~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~ 159 (463)
T 2wg3_C 88 VSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDG 159 (463)
T ss_dssp EEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCT
T ss_pred EEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCC
Confidence 33332 1 13444555421 111222221 1122457899999997 56665543
No 351
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=90.95 E-value=10 Score=35.42 Aligned_cols=150 Identities=11% Similarity=0.131 Sum_probs=79.9
Q ss_pred cccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecc-------cccceeeEEEcCCCCcEEEEEeCCCc----E
Q 018293 122 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH-------HTDKVQAVAWNHHSPQILLSGSFDRS----V 190 (358)
Q Consensus 122 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~dg~----i 190 (358)
...|.+|+++|.+...++++...+.|...+ ..++.=..+.. ....+.++++.|..+..++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 458999999997666777888777766554 33432222221 12468999999865455555543211 2
Q ss_pred EEEEcccCCCccceeee----------cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEe---
Q 018293 191 VMKDARISTHSGFKWAV----------AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--- 257 (358)
Q Consensus 191 ~i~d~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--- 257 (358)
.||-.......-..... ...+..++++|.+...++++...+.| |--..+- +....+.
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG--------~TW~~~~~~~ 162 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRA--------KTWTNVTSIP 162 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTT--------SSCEEETTSC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCC--------cccCCCccCc
Confidence 33333222111000000 11356788888666677777644433 3333321 1111211
Q ss_pred ---ecCCceeEEEecCCCCcEEEEEeCC
Q 018293 258 ---AHDKAVCTISYNPLVPNLLATGSTD 282 (358)
Q Consensus 258 ---~~~~~i~~i~~~~~~~~~l~~~~~d 282 (358)
.....+..+.++|..+..++++..+
T Consensus 163 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 163 DAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 1124578899988654566666654
No 352
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.60 E-value=5.5 Score=31.73 Aligned_cols=185 Identities=16% Similarity=0.134 Sum_probs=99.2
Q ss_pred cEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCccc
Q 018293 124 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF 203 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 203 (358)
.|..++.... ..++. . ||.|..|-....-.+..-..-...|..++.... ..+.-. ||.|..|-.........
T Consensus 64 ~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~---hs~al~-~G~v~~wG~n~~gqlg~ 135 (282)
T 3qhy_B 64 GVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW---ASYALK-DGKVIAWGDDSDGQTTV 135 (282)
T ss_dssp CCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT---EEEEEE-TTEEEEEECCTTSTTSC
T ss_pred CEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC---EEEEEe-CCeEEEecCCCCCcCCC
Confidence 4666666543 23443 4 899999976543211111111245777766543 334445 99999998765433322
Q ss_pred eeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCC
Q 018293 204 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 283 (358)
Q Consensus 204 ~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg 283 (358)
.......|..++.-. ...++-. ||.|+.|-........ .+ ..-...|..++.... ..++. .||
T Consensus 136 ~~~~~~~i~~i~~G~---~~~~~l~-~G~v~~wG~n~~gqlg-----~p----~~~~~~v~~i~~G~~--hs~al--~~G 198 (282)
T 3qhy_B 136 PAEAQSGVTALDGGV---YTALAVK-NGGVIAWGDNYFGQTT-----VP----AEAQSGVDDVAGGIF--HSLAL--KDG 198 (282)
T ss_dssp CGGGGSSEEEEEECS---SEEEEEE-TTEEEEEECCTTSTTS-----CC----GGGGSSEEEEEECSS--EEEEE--ETT
T ss_pred CccCCCCeEEEEccc---CEEEEEE-CCEEEEecCCCCCCCC-----Cc----eecCCCeEEEEecCC--EEEEE--ECC
Confidence 223345677776543 2333334 7999999876542211 00 111345777776643 34444 599
Q ss_pred cEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 284 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 284 ~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
.|+.|-........+ .. .....|..++...... ++.. ||.|+.|-.....
T Consensus 199 ~v~~wG~n~~gqlg~-p~-~~~~~v~~i~~G~~h~--~al~--~g~v~~wG~n~~g 248 (282)
T 3qhy_B 199 KVIAWGDNRYKQTTV-PT-EALSGVSAIASGEWYS--LALK--NGKVIAWGSSRTA 248 (282)
T ss_dssp EEEEEECCTTSTTCC-CG-GGGSSCCEEEECSSCE--EEEE--TTEEEEESTTCCC
T ss_pred eEEEEECCCCCCCCC-Cc-ccCCCceEEEcCCCEE--EEEE--CCEEEEecCCCCc
Confidence 999997654321111 00 1123466666554432 3333 8999999765543
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.64 E-value=10 Score=33.50 Aligned_cols=261 Identities=10% Similarity=0.088 Sum_probs=131.6
Q ss_pred EEecCCCCeEEEEEcccccCcCceeecCCcccc-------cccccccCCceeccccccCCCcccEEEEecCCCCCcEEEE
Q 018293 68 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEE-------KKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 140 (358)
Q Consensus 68 l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 140 (358)
+.+|+..|.|+|+-+.+++.+..+.++...+.. .+..... ......-..|--.++--.=.-+ +++|+.
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~----~~~~~~gD~HHp~~S~tdg~yD-Grylfi 147 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGD----SAKFLNGDCHHPHISMTDGKYD-GKYLFI 147 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGG----GGGCCCCCCCCCEEEEETTEEE-EEEEEE
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhc----CCCccCCCcCCCcccccCCeee-eEEEEE
Confidence 678999999999999998887766665432221 1100000 0000001112111111111123 446666
Q ss_pred EE-cCCeEEEEECCCCceeeeec-ccccceeeEEEc--CCCCcEEEEEeC-------CCcE---------EEEEcccCCC
Q 018293 141 AS-ADKQVKIWDVAAGKCNLTLE-HHTDKVQAVAWN--HHSPQILLSGSF-------DRSV---------VMKDARISTH 200 (358)
Q Consensus 141 ~~-~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~~l~~~~~-------dg~i---------~i~d~~~~~~ 200 (358)
-. .+..|-..+++..++-+.+. .....+..++|. |.. .+++++++ ||.. .+|..-....
T Consensus 148 Ndkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T-~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~t 226 (638)
T 3sbq_A 148 NDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHT-KYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAET 226 (638)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBC-CEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTT
T ss_pred ecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCc-cEEEecceeeccCCCCCcccccCChhhceEEEEEcCCc
Confidence 55 45678888888887655443 244567788886 555 56666653 3321 1111101111
Q ss_pred cccee--eecCCeeeEEEcCCCCCeEEEEecC---------------CeEEEEEcccC-------CCCCCC---------
Q 018293 201 SGFKW--AVAADVESLAWDPHAEHSFVVSLED---------------GTIKGFDIRTA-------KSDPDS--------- 247 (358)
Q Consensus 201 ~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~d---------------g~i~i~d~~~~-------~~~~~~--------- 247 (358)
....+ ........+...+++. +.++.+.+ ..+.++++..- +.....
T Consensus 227 m~v~~Qv~v~gnld~~~~~~~g~-~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~ 305 (638)
T 3sbq_A 227 MEMAFQVIVDGNLDNTDADYTGR-FAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDG 305 (638)
T ss_dssp CSEEEEEEESSCCCCEEECSSSS-EEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEEC
T ss_pred cEEEEEEEcCCChhhcCCCCCCC-EEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcc
Confidence 11011 1122233344445443 33333221 12455554321 100000
Q ss_pred C-----CCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecCCC------C---c--eeeEecCCCCceeEEE
Q 018293 248 T-----SQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN------Q---P--SCIASRNPKAGAVFSV 311 (358)
Q Consensus 248 ~-----~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~------~---~--~~~~~~~~~~~~v~~~ 311 (358)
. .....+.+ .-......+..+|||...+++|-.+.++.++|++.. + + ....+.. -.-.....
T Consensus 306 ~~~~~~~~~~~~~i-P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt 383 (638)
T 3sbq_A 306 RKKDGKDSKFTRYV-PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHT 383 (638)
T ss_dssp SCBTTBCCSSEEEE-EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEE
T ss_pred ccccccCCceEEEE-eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEE
Confidence 0 00112222 223344678999999555555666889999999742 1 1 1122222 23346678
Q ss_pred EEcCCCCeEEEEEccCCeEEEEEccCC
Q 018293 312 AFSEDSPFVLAIGGSKGKLEIWDTLSD 338 (358)
Q Consensus 312 ~~~~~~~~~l~~~~~dg~i~vw~~~~~ 338 (358)
+|.++|. .+.+--.|..|.-|++...
T Consensus 384 ~Fd~~G~-aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 384 TFDGRGN-AYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EECSSSE-EEEEETTTTEEEEEEHHHH
T ss_pred EECCCCc-eEeeeeecceEEEEeccHH
Confidence 9999995 6888889999999999753
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.67 E-value=11 Score=36.03 Aligned_cols=38 Identities=21% Similarity=0.471 Sum_probs=31.8
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeee
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL 161 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 161 (358)
..+.++...++ ..++++-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~-~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETT-TTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCC-CcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35677777777 669999999999999999999887765
No 355
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=88.03 E-value=16 Score=33.72 Aligned_cols=106 Identities=15% Similarity=0.120 Sum_probs=60.1
Q ss_pred cEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeeccc-------ccceeeEEEcCCCCcEEEEEeCC-------Cc
Q 018293 124 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHH-------TDKVQAVAWNHHSPQILLSGSFD-------RS 189 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~d-------g~ 189 (358)
.|..|+++|.+...+.++...+.|...+ ..++.-..+..+ ...+.+++++|..+..++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 7999999998666777777667666655 333322222111 24588999998654555555421 12
Q ss_pred EEEEEcccCCCccceeee----------cCCeeeEEEcCCCCCeEEEEecC
Q 018293 190 VVMKDARISTHSGFKWAV----------AADVESLAWDPHAEHSFVVSLED 230 (358)
Q Consensus 190 i~i~d~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~~~~~~~~d 230 (358)
..+|....+...-..... ...+..++++|.++..++++...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 445544433221111110 01246899999877788887643
No 356
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=87.98 E-value=16 Score=34.09 Aligned_cols=152 Identities=14% Similarity=0.088 Sum_probs=75.8
Q ss_pred ccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccC--CCccceee----ecCCeeeEEEcCCCCCeEEEEecCCe----EE
Q 018293 165 TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS--THSGFKWA----VAADVESLAWDPHAEHSFVVSLEDGT----IK 234 (358)
Q Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~dg~----i~ 234 (358)
...|.+|+++|..+..++++...+.|...+=... +.+..... ....+.+++++|.+...++++..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 4579999999987677888887777655431111 01110000 12468999999865556666543211 23
Q ss_pred EEEcccCCCCCCCCCCCccEEEee---------cCCceeEEEecCCCCcEEEEEeCCCcEEEEecCC-CCceeeEec-C-
Q 018293 235 GFDIRTAKSDPDSTSQQSSFTLHA---------HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIASR-N- 302 (358)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~-~- 302 (358)
||--...- +....+.. ....+..++++|..+..++.+...+.| |-... ++.-..... .
T Consensus 94 v~~S~DgG--------~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~ 163 (789)
T 1sqj_A 94 FYVSEDRG--------QSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPD 163 (789)
T ss_dssp EEEESSTT--------SEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCC
T ss_pred EEEECCCC--------CcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCcc
Confidence 34333221 11111111 011345688888655677777644443 33322 321111111 0
Q ss_pred --CCCceeEEEEEcCCC-CeEEEEEccC
Q 018293 303 --PKAGAVFSVAFSEDS-PFVLAIGGSK 327 (358)
Q Consensus 303 --~~~~~v~~~~~~~~~-~~~l~~~~~d 327 (358)
.....+..+.++|.. ..+++ +..+
T Consensus 164 ~~~~~~~~~~i~~~p~~~~~~~~-~~~~ 190 (789)
T 1sqj_A 164 AFTNGIGYTSVIFDPERNGTIYA-SATA 190 (789)
T ss_dssp CCSTTTCEEEEEECTTSTTCEEE-EESS
T ss_pred ccCCCCCeEEEEECCCCCCEEEE-EEcC
Confidence 112457888998853 33444 4433
No 357
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.74 E-value=23 Score=31.43 Aligned_cols=86 Identities=9% Similarity=-0.027 Sum_probs=56.1
Q ss_pred eeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCC--CC-CCCCc-cEEEeecCCceeEEEecCCCCcEEEEEe
Q 018293 205 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDP--DS-TSQQS-SFTLHAHDKAVCTISYNPLVPNLLATGS 280 (358)
Q Consensus 205 ~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~--~~-~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 280 (358)
.........+..+|++...++.|--+.++.++|+++..... .. ..... ...... .......+|.++| +...+--
T Consensus 319 iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G-~aYTtlf 396 (638)
T 3sbq_A 319 VPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRG-NAYTTLF 396 (638)
T ss_dssp EEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSS-EEEEEET
T ss_pred EeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCC-ceEeeee
Confidence 34455677889999888777777789999999998531100 00 00011 112222 2345678999988 6666667
Q ss_pred CCCcEEEEecCC
Q 018293 281 TDKMVKLWDLSN 292 (358)
Q Consensus 281 ~dg~i~i~d~~~ 292 (358)
-|..|.-|++..
T Consensus 397 idSqvvkWni~~ 408 (638)
T 3sbq_A 397 IDSQVVKWNMEE 408 (638)
T ss_dssp TTTEEEEEEHHH
T ss_pred ecceEEEEeccH
Confidence 899999999865
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=79.10 E-value=25 Score=28.71 Aligned_cols=153 Identities=10% Similarity=0.078 Sum_probs=86.9
Q ss_pred CCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEEc
Q 018293 64 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 143 (358)
Q Consensus 64 ~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 143 (358)
+..++++.+.+|.|+--.+....... +.......+... +.+..+..... ...++..+.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~--------------------r~G~~~i~lke~-D~lv~~~~~~~-~d~ill~T~ 165 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNR--------------------SGGIVAVNLRDN-DELVGAVLCSA-GDDLLLVSA 165 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCC--------------------SSCEESCBCCTT-CCEEEEEEECT-TCEEEEEET
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccc--------------------cCceEEEEECCC-CEEEEEEEecC-CCEEEEEEC
Confidence 56789999999999988876543221 011112223333 34444444333 346777888
Q ss_pred CCeEEEEECC--CC---------ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc--------ce
Q 018293 144 DKQVKIWDVA--AG---------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG--------FK 204 (358)
Q Consensus 144 dg~v~iwd~~--~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--------~~ 204 (358)
.|.+..+... .- .....+. ..+.|.++...+.+ ..++..+..|.++.-.+..-.... ..
T Consensus 166 ~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~-~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~ 243 (327)
T 3uc1_A 166 NGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREG-TYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVM 243 (327)
T ss_dssp TSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTT-CEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSC
T ss_pred CCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCC-CEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEE
Confidence 8998888776 21 1112232 24556666665555 678899999999988765332110 01
Q ss_pred eee-cCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccC
Q 018293 205 WAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241 (358)
Q Consensus 205 ~~~-~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~ 241 (358)
... ...+..+.... +...++..+.+|.+.-++...-
T Consensus 244 l~~~~d~lv~~~~~~-~~~~i~l~T~~G~~ir~~~~~i 280 (327)
T 3uc1_A 244 YDRRRGRLVGALIVD-DDSELYAVTSGGGVIRTAARQV 280 (327)
T ss_dssp CCTTTCSEEEEEEEC-TTCEEEEEEGGGCEEEEEGGGS
T ss_pred ecCCCCeEEEEEEeC-CCccEEEEcCCCeEEEEehhhc
Confidence 111 23344443333 3345666777888777776543
No 359
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=78.47 E-value=41 Score=30.94 Aligned_cols=103 Identities=13% Similarity=0.152 Sum_probs=57.6
Q ss_pred cCCeEEEEEcccCCCCCCCCCCCccEE-E-eecCCceeEEEecCCCCcEEEEEeCCCc--EEEEecCCCC--ceeeEecC
Q 018293 229 EDGTIKGFDIRTAKSDPDSTSQQSSFT-L-HAHDKAVCTISYNPLVPNLLATGSTDKM--VKLWDLSNNQ--PSCIASRN 302 (358)
Q Consensus 229 ~dg~i~i~d~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~i~~~~~~~~~l~~~~~dg~--i~i~d~~~~~--~~~~~~~~ 302 (358)
..+.|...|+........ ....... + ......+..+.+..+ .++++...++. +.++|+.+++ ......+.
T Consensus 318 ~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp 393 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTES--DKTSLKILFTPTANEVFNFISTTKD--RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLP 393 (711)
T ss_dssp CTTCEEEEEGGGGGSCGG--GCTTCEEEECCCTTEEEEEEEECSS--CEEEEEEETTEEEEEEECEETTEECCCEEECCC
T ss_pred CCCeEEEEECCccccccc--ccccceEEECCCCCCeEEEEEEECC--EEEEEEEECCEEEEEEEECCCCceEEEeccCCC
Confidence 467788999876421000 0011222 2 223456778888874 57777777775 6677776553 11112232
Q ss_pred CCCceeEEEEEcCCCCeEEEEEccC---CeEEEEEcc
Q 018293 303 PKAGAVFSVAFSEDSPFVLAIGGSK---GKLEIWDTL 336 (358)
Q Consensus 303 ~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~vw~~~ 336 (358)
. .+.+......+++..++++.+.. +.+..+|+.
T Consensus 394 ~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 394 Y-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp S-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred C-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 2 24566667777776556554432 567777775
No 360
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=78.15 E-value=43 Score=30.96 Aligned_cols=108 Identities=11% Similarity=0.007 Sum_probs=59.6
Q ss_pred ceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCC--Cccceee----ecCCeeeEEEcCCCCCeEEEEecC-------CeE
Q 018293 167 KVQAVAWNHHSPQILLSGSFDRSVVMKDARIST--HSGFKWA----VAADVESLAWDPHAEHSFVVSLED-------GTI 233 (358)
Q Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~d-------g~i 233 (358)
.|..|+++|..+..++++...+.|...+=.... .+..... ....+.+++++|.+.+.++++... +..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 789999999876777777766766554321111 1110001 124588999999666566665432 124
Q ss_pred EEEEcccCCCCCCCCCCCccEEEee-c--------CCceeEEEecCCCCcEEEEEeCC
Q 018293 234 KGFDIRTAKSDPDSTSQQSSFTLHA-H--------DKAVCTISYNPLVPNLLATGSTD 282 (358)
Q Consensus 234 ~i~d~~~~~~~~~~~~~~~~~~~~~-~--------~~~i~~i~~~~~~~~~l~~~~~d 282 (358)
.+|.-..+- +....+.. . ...+..++++|..+..|+++...
T Consensus 104 ~l~~S~DgG--------~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 104 AILRSTDRG--------ETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp EEEEESSSS--------SSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred cEEEeCCCC--------CCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 455554432 22222111 0 01246789998766777777643
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.12 E-value=17 Score=34.73 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=30.2
Q ss_pred eeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 307 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 307 ~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
.+.+++..++..+ +.+-+.|+++|+|++.+++++..
T Consensus 237 ~~~~~~~~~~~~~-lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNV-LVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTE-EEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcE-EEEEECCCEEEEEECCCCCeEee
Confidence 4677788888885 77889999999999999988765
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=74.24 E-value=37 Score=28.34 Aligned_cols=174 Identities=8% Similarity=0.085 Sum_probs=86.6
Q ss_pred cccEEEEecC---CC---CCcEEEEE-EcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEE
Q 018293 122 TDSVLGLAWN---KE---FRNILASA-SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 194 (358)
Q Consensus 122 ~~~v~~~~~~---~~---~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 194 (358)
...+..+.+. |. +..++..+ +..+.|.|+|+.+++.-+.+ |.. |.|+. ...++. +|.-.
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~--~~~------~~pd~-~~~~~i--~G~~~--- 216 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT--HPT------FKAER-PTKFDY--GGKEY--- 216 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE--CGG------GSCCS-CEEEEE--TTEEE---
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc--cCC------Ccccc-CcceEE--CCEEe---
Confidence 3557777776 21 12243333 34678999999998866554 221 34442 111111 22211
Q ss_pred cccCCCccceeeecCCeeeEEEcCCC---CCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecC--CceeEEEec
Q 018293 195 ARISTHSGFKWAVAADVESLAWDPHA---EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD--KAVCTISYN 269 (358)
Q Consensus 195 ~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~i~~i~~~ 269 (358)
.....+..++++|+. +..+.-....+ -++|.+.+........ ...+..+.... ..-..+++.
T Consensus 217 -----------~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~-~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 217 -----------EFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGG-KLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp -----------EECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTC-CCCCEEEEECCTTCCEEEEEEC
T ss_pred -----------EeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcch-hhceEEeeecCCCCCcceEEEe
Confidence 124568889999861 33444443333 1334333211100000 12222222211 233456675
Q ss_pred -CCCCcEEEEEeCCCcEEEEecCC-C----CceeeEecCCCCceeEEEEEcCCCCeEEEEEc
Q 018293 270 -PLVPNLLATGSTDKMVKLWDLSN-N----QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG 325 (358)
Q Consensus 270 -~~~~~~l~~~~~dg~i~i~d~~~-~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 325 (358)
.+| .++++--....|..|+..+ . ....+.. ...-.....+.+.++|. +.+..+
T Consensus 284 ~~~G-~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~-d~~l~~pd~~~i~~~g~-Lwv~sn 342 (381)
T 3q6k_A 284 PKTK-VIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT-SSRFVFGTDISVDSKGG-LWFMSN 342 (381)
T ss_dssp TTTC-EEEEEESSSSEEEEEETTSCSBCGGGEEEEEE-CTTCCSEEEEEECTTSC-EEEEEC
T ss_pred CCCC-eEEEEeccCCeEEEEeCCCCccccCceEEEEE-CCCccccCeEEECCCCe-EEEEEC
Confidence 455 7777777888899999876 1 1112222 22334567777777776 455443
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.30 E-value=6.3 Score=38.63 Aligned_cols=38 Identities=24% Similarity=0.483 Sum_probs=29.9
Q ss_pred cEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeec
Q 018293 124 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE 162 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 162 (358)
.+.+++..++ ..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~-~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETT-TTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCC-ccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3445555566 5699999999999999999999877653
No 364
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=67.08 E-value=81 Score=29.29 Aligned_cols=153 Identities=12% Similarity=0.089 Sum_probs=79.5
Q ss_pred CCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecc------------cccceeeEEEcCCCCcEEEEEeCC
Q 018293 120 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH------------HTDKVQAVAWNHHSPQILLSGSFD 187 (358)
Q Consensus 120 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~l~~~~~d 187 (358)
+-.+.|.+|.++|.+...+.++...|.|...+ ..++.=..+.. ....+.+++++|..+..++.+...
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~ 96 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGD 96 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECS
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecc
Confidence 34568999999998767777777667655443 33322111111 124588999998544555544321
Q ss_pred -----CcEEEEEcccCCCccceeee--------cCC--eeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCc
Q 018293 188 -----RSVVMKDARISTHSGFKWAV--------AAD--VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS 252 (358)
Q Consensus 188 -----g~i~i~d~~~~~~~~~~~~~--------~~~--i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 252 (358)
....||-...+...-..... ... ...++++|.+...++++...+.| |--..+- +.
T Consensus 97 ~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l--~~S~DgG--------~T 166 (763)
T 3a0f_A 97 YVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGL--WRSTDRA--------QT 166 (763)
T ss_dssp CTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCE--EEESSTT--------SS
T ss_pred cccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcE--EEECCCC--------cC
Confidence 12334433332211101111 111 14688888766677777665433 3332221 11
Q ss_pred cEEEe------ecCCceeEEEecCCCCcEEEEEeCCC
Q 018293 253 SFTLH------AHDKAVCTISYNPLVPNLLATGSTDK 283 (358)
Q Consensus 253 ~~~~~------~~~~~i~~i~~~~~~~~~l~~~~~dg 283 (358)
...+. .....+..++++|..+..++++..++
T Consensus 167 W~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 167 WSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred ccccccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 11111 11134778899886555566666665
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.69 E-value=12 Score=34.13 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=25.9
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceee
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVI 93 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~ 93 (358)
.+..++++-+.|.++|+|++.++..+....+
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3577999999999999999999887766555
No 366
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=64.91 E-value=54 Score=26.45 Aligned_cols=206 Identities=11% Similarity=0.051 Sum_probs=108.4
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 142 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 142 (358)
++..++++.+.+|.|+--.+......... ........+... +.+..+..... ...++..+
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~------------------~~g~~~~~lke~-D~l~~~~~~~~-~~~ll~~T 65 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTG------------------GKGLSSFDLNDG-DEIVIALCVNT-HDYLFMIS 65 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSS------------------CCCEECCCCCTT-CCEEEEEEEET-TCEEEEEE
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccC------------------CCCceecccCCC-CEEEEEEEECC-CCEEEEEE
Confidence 46678899999999998877643322100 000001122223 33333333333 34667778
Q ss_pred cCCeEEEEECCC---------Cce---eeeecccccceeeEEEcCC--CCcEEEEEeCCCcEEEEEcccCCCcc------
Q 018293 143 ADKQVKIWDVAA---------GKC---NLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHSG------ 202 (358)
Q Consensus 143 ~dg~v~iwd~~~---------~~~---~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~------ 202 (358)
..|.+.-..... |.. ...+.. ...|.++...++ ....++..+..|.++...+..-....
T Consensus 66 ~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~ 144 (312)
T 1suu_A 66 NEGKLYLINAYEIKDSSRASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIV 144 (312)
T ss_dssp TTSEEEEEEGGGSCC-------CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEEC
T ss_pred CCCeEEEEEHHHCCCCCccCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEE
Confidence 888877666531 111 111222 234544433321 22678888999999998875432211
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 282 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 282 (358)
........+..+.... +...++..+.+|.+..+....-..............+.. ...+.++...+++ ..+++.+..
T Consensus 145 i~L~~~d~lv~~~~~~-~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~-~~l~~vt~~ 221 (312)
T 1suu_A 145 IKLNDKDFVTSAEIVF-KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKEN-PYLLIVSEN 221 (312)
T ss_dssp BCCCTTCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTC-SEEEEEETT
T ss_pred EecCCCCEEEEEEEeC-CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCC-CeEEEEECC
Confidence 1112234455555443 344788888999999998876321111011112222222 3445565554444 567788889
Q ss_pred CcEEEEecCC
Q 018293 283 KMVKLWDLSN 292 (358)
Q Consensus 283 g~i~i~d~~~ 292 (358)
|..+..++..
T Consensus 222 G~~kr~~~~e 231 (312)
T 1suu_A 222 GYGKRLNMSK 231 (312)
T ss_dssp SEEEEEEGGG
T ss_pred CceEEEEHHH
Confidence 9999888754
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.87 E-value=14 Score=33.82 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=30.8
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH 163 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 163 (358)
..|.++.+. ..++++-+.|.++|+||+++++++.+..-
T Consensus 222 ~~Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 457776664 45999999999999999999998877653
No 368
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=63.81 E-value=53 Score=25.97 Aligned_cols=164 Identities=15% Similarity=0.122 Sum_probs=88.2
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 202 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 202 (358)
..|..++.... ..+.-. ||.|..|-....-.+..-......|..++..... .+.-. ||.+..|-........
T Consensus 102 ~~v~~ia~G~~---hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~---~~~l~-~G~v~~wG~n~~gqlg 173 (282)
T 3qhy_B 102 SGVDAIAAGAW---ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT---ALAVK-NGGVIAWGDNYFGQTT 173 (282)
T ss_dssp SSEEEEEEETT---EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE---EEEEE-TTEEEEEECCTTSTTS
T ss_pred CCeEEEECcCC---EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE---EEEEE-CCEEEEecCCCCCCCC
Confidence 35777776644 333445 9999999765432221111123456666654432 23334 7999999776544332
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCC
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 282 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 282 (358)
........|..++.-. ...++- .||.|+.|-........ .+. .....|..++-... ..++. . |
T Consensus 174 ~p~~~~~~v~~i~~G~---~hs~al-~~G~v~~wG~n~~gqlg-----~p~----~~~~~v~~i~~G~~--h~~al-~-~ 236 (282)
T 3qhy_B 174 VPAEAQSGVDDVAGGI---FHSLAL-KDGKVIAWGDNRYKQTT-----VPT----EALSGVSAIASGEW--YSLAL-K-N 236 (282)
T ss_dssp CCGGGGSSEEEEEECS---SEEEEE-ETTEEEEEECCTTSTTC-----CCG----GGGSSCCEEEECSS--CEEEE-E-T
T ss_pred CceecCCCeEEEEecC---CEEEEE-ECCeEEEEECCCCCCCC-----CCc----ccCCCceEEEcCCC--EEEEE-E-C
Confidence 2222345677776643 233333 69999999876542211 010 11234677766543 33333 3 9
Q ss_pred CcEEEEecCCCCceeeEecCCCCceeEEEEEcCCC
Q 018293 283 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDS 317 (358)
Q Consensus 283 g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 317 (358)
|.|+.|=.....+..+ ...|.+++-....
T Consensus 237 g~v~~wG~n~~gq~~v------~~~v~~iaaG~~h 265 (282)
T 3qhy_B 237 GKVIAWGSSRTAPSSV------QSGVSSIEAGPNA 265 (282)
T ss_dssp TEEEEESTTCCCCGGG------SSCEEEEEECSSC
T ss_pred CEEEEecCCCCccccC------CCCcEEEEECcCe
Confidence 9999997765543222 1245555554443
No 369
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.87 E-value=22 Score=34.87 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=28.5
Q ss_pred eeEEEEEcCCCCeEEEEEccCCeEEEEEccCCCcccc
Q 018293 307 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 343 (358)
Q Consensus 307 ~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 343 (358)
.+.+++..++..+ +++-+.|+++|+|++.+++++..
T Consensus 239 ~~vs~~~~~~~~~-lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNV-LVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTE-EEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccE-EEEEeCCCEEEEEECCCCCeEEe
Confidence 3445566677775 77889999999999999988765
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.80 E-value=49 Score=29.60 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=38.3
Q ss_pred eeEEEecCCCCcEEEEEeCC------------CcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEE
Q 018293 263 VCTISYNPLVPNLLATGSTD------------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAI 323 (358)
Q Consensus 263 i~~i~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 323 (358)
.-.|+|+|.| +++++-..+ ..+.+.+..+++...... ......++.++|+||++.+++.
T Consensus 478 PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CCCCccCcCeeECCCCCEEEEE
Confidence 3568999988 555543221 235566666676443333 2346789999999999976654
No 371
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=54.86 E-value=1.3e+02 Score=27.83 Aligned_cols=63 Identities=11% Similarity=0.035 Sum_probs=38.5
Q ss_pred cccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCC----cccee-----e----ecCCeeeEEEcCCCCCeEEEEe
Q 018293 164 HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH----SGFKW-----A----VAADVESLAWDPHAEHSFVVSL 228 (358)
Q Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~-----~----~~~~i~~~~~~~~~~~~~~~~~ 228 (358)
-...|.++.++|.++..++++...|.|...+ .+.. +.... . ....+.+++++|.+...++++.
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~--DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWN--AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE--TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEEC--CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 4568999999998877788887667654432 2111 11000 0 1245889999986555666544
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=54.70 E-value=77 Score=24.98 Aligned_cols=207 Identities=12% Similarity=0.010 Sum_probs=108.1
Q ss_pred ccEEEEecCCCCCcEEEEEEcCCeEEEEE---CCCCceeeeecccccceeeEEEcCC-CCcEEEEEeCCCcEEEEEcccC
Q 018293 123 DSVLGLAWNKEFRNILASASADKQVKIWD---VAAGKCNLTLEHHTDKVQAVAWNHH-SPQILLSGSFDRSVVMKDARIS 198 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd---~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~ 198 (358)
+.+..+.-... ...|+.-+.+|.++--. +..+.....+. ....|..+.. ++ ....++..+.+|.++...+..-
T Consensus 24 D~~~~~~~~~t-~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 24 APVVNILRVPF-TEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCEEEEEEEET-TSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEEEECC-CCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 34444443333 23455566777766433 22221111133 3455666544 32 2368999999999999987654
Q ss_pred CC-----ccceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCC
Q 018293 199 TH-----SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 273 (358)
Q Consensus 199 ~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 273 (358)
.. ..........+..+.... +...++..+..|.+..+....-..............+.. ...|..+...+++
T Consensus 101 ~~~~~G~~~i~lkegD~l~~~~~~~-~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~- 177 (276)
T 3no0_A 101 EYKAQGMPIIKLTEGDEVVSIASSV-DETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGE- 177 (276)
T ss_dssp TTCSTTEECSCCCTTCCEEEEEECC-SSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSC-
T ss_pred hhhcCCeEEEecCCCCEEEEEEEeC-CCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCC-
Confidence 30 011112234555555544 344788888999988887765322110001111122222 2445555544444
Q ss_pred cEEEEEeCCCcEEEEecCCCCc-----eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEE--EEccC
Q 018293 274 NLLATGSTDKMVKLWDLSNNQP-----SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEI--WDTLS 337 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v--w~~~~ 337 (358)
..++..+..|.++...+..-.. .-+..+ ...+.+..+....+... ++..+.+|.+.. ++...
T Consensus 178 ~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~-i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVE-LLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEE-EEEEETTSCEEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCE-EEEEcCCCeEEEeeeCHHH
Confidence 6788889999998887643211 012222 22344554443333333 445677788777 77654
No 373
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=53.30 E-value=87 Score=25.20 Aligned_cols=195 Identities=12% Similarity=0.085 Sum_probs=107.2
Q ss_pred CcEEEEEEcCCeEEEEECCCCcee---------eeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCc----
Q 018293 135 RNILASASADKQVKIWDVAAGKCN---------LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS---- 201 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~~~~---------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---- 201 (358)
..++++.+.+|.|+--.+..-+.. ..++. .+.+..+...... ..++..+..|.++-.....-...
T Consensus 8 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~-~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 8 ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTH-DYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETT-CEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCC-CEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 457888999999998876533211 11232 2334444444444 56777788898877765421111
Q ss_pred -------cceeeecCCeeeEEEcCC--CCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCC
Q 018293 202 -------GFKWAVAADVESLAWDPH--AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 272 (358)
Q Consensus 202 -------~~~~~~~~~i~~~~~~~~--~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 272 (358)
.........+..+...++ ....++..+..|.++--.+....... ........+.. ...+..+.....+
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r--~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK--SRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC------CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC--CCcEEEEecCC-CCEEEEEEEeCCC
Confidence 001122234444433221 24568888999999998886542211 00111222333 3455555554433
Q ss_pred CcEEEEEeCCCcEEEEecCCCCc-------eeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 273 PNLLATGSTDKMVKLWDLSNNQP-------SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 273 ~~~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
..++..+.+|.+..+....-.. .....+.. ...|..+....++.. +++.+..|..+...+..
T Consensus 163 -~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~-l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 163 -EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPY-LLIVSENGYGKRLNMSK 231 (312)
T ss_dssp -CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSE-EEEEETTSEEEEEEGGG
T ss_pred -CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCe-EEEEECCCceEEEEHHH
Confidence 5677888899988888754211 11222222 344666655555554 55678889998888854
No 374
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=52.70 E-value=1e+02 Score=25.76 Aligned_cols=57 Identities=7% Similarity=0.060 Sum_probs=37.8
Q ss_pred eEEEEECCCC--ceeeeecc------cccceeeEEEc---CC---CCcEEEEEe-CCCcEEEEEcccCCCcc
Q 018293 146 QVKIWDVAAG--KCNLTLEH------HTDKVQAVAWN---HH---SPQILLSGS-FDRSVVMKDARISTHSG 202 (358)
Q Consensus 146 ~v~iwd~~~~--~~~~~~~~------~~~~v~~~~~~---~~---~~~~l~~~~-~dg~i~i~d~~~~~~~~ 202 (358)
.|.+||+.+. +.++++.- ....+..+.+. |. +..++..+. ..+.|.++|+.+++..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 195 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWN 195 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEE
Confidence 5889999999 88877642 23457777777 22 123444443 46789999998876554
No 375
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=49.86 E-value=1.6e+02 Score=27.15 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=55.0
Q ss_pred CCCcEEEEEcccCCC-------ccceee--ecCCeeeEEEcCCCCCeEEEEecCCe--EEEEEcccCCCCCCCCCCCccE
Q 018293 186 FDRSVVMKDARISTH-------SGFKWA--VAADVESLAWDPHAEHSFVVSLEDGT--IKGFDIRTAKSDPDSTSQQSSF 254 (358)
Q Consensus 186 ~dg~i~i~d~~~~~~-------~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~ 254 (358)
..+.|...|+..... ...... ....+..+.|.. +.++++...++. +.++|+.++.. ...
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~l~~~~~~~~~~~l~~~~~~~g~~--------~~~ 387 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK--DRVFLATYDNVVAKVVTFTLENEQW--------TKP 387 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS--SCEEEEEEETTEEEEEEECEETTEE--------CCC
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC--CEEEEEEEECCEEEEEEEECCCCce--------EEE
Confidence 467799999877421 111122 233577788876 357777777775 66677654410 111
Q ss_pred E-Eeec-CCceeEEEecCCCCcEEEEEeCC---CcEEEEecC
Q 018293 255 T-LHAH-DKAVCTISYNPLVPNLLATGSTD---KMVKLWDLS 291 (358)
Q Consensus 255 ~-~~~~-~~~i~~i~~~~~~~~~l~~~~~d---g~i~i~d~~ 291 (358)
. +... .+.+......+++..++++.+.. +.+..+|+.
T Consensus 388 ~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 388 VVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred eccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 2 2111 24466666677775666665542 457778876
No 376
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=47.46 E-value=1.2e+02 Score=25.15 Aligned_cols=154 Identities=14% Similarity=0.028 Sum_probs=79.6
Q ss_pred CcEEEEEEcCCeEEEEECCCC-------ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc-----
Q 018293 135 RNILASASADKQVKIWDVAAG-------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG----- 202 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----- 202 (358)
..+|+.++..|.++.-.+... .....+.. .+.+..+...... ..++..+.+|.+..++...-....
T Consensus 113 ~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~-~~i~l~T~~G~~irf~~~~v~~~gR~a~G 190 (370)
T 3l6v_A 113 NRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGD-RDVLLFASNGKTVRFGESTVRSMGRTATG 190 (370)
T ss_dssp TCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSC-CEEEEEETTSEEEEEEGGGSCBCCTTCCC
T ss_pred CcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCC-ceEEEEeCCCeEEEEEccccCccCCCCCC
Confidence 458899999999999886432 22223333 3445455444444 567778888988888765322111
Q ss_pred ---ceeeecCCeeeEEEcCC----------------------------------CCCeEEEEecCCeEEEEEcccCCCCC
Q 018293 203 ---FKWAVAADVESLAWDPH----------------------------------AEHSFVVSLEDGTIKGFDIRTAKSDP 245 (358)
Q Consensus 203 ---~~~~~~~~i~~~~~~~~----------------------------------~~~~~~~~~~dg~i~i~d~~~~~~~~ 245 (358)
........|.++...+. .+..+++.+..|..+...+..-....
T Consensus 191 V~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~ 270 (370)
T 3l6v_A 191 VRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKG 270 (370)
T ss_dssp EECCCCCTTCCEEEEEEECCC-----------------------------------CEEEEEETTSEEEEEEGGGSCCBC
T ss_pred eeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccc
Confidence 01112334444443331 23478888899999888876543211
Q ss_pred CCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeCCCcEEEEecC
Q 018293 246 DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 291 (358)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~d~~ 291 (358)
-.........+....+.+..+.+..+. ..++..+..|.+.-..+.
T Consensus 271 Rg~kGv~~~k~~~~~g~lv~~~~v~~~-d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 271 RGTQGVIGIQTTERNGKLVRAVLLGST-DEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp TTSCCEESSCCCTTTCSEEEEEEECTT-CEEEEEETTCCEEEEEGG
T ss_pred cCCcceEEEEecCCCCcEEEEEEeCCC-ceEEEEcCCCeEEEeeHh
Confidence 000001111122222344444333333 344445666666555543
No 377
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=46.88 E-value=1.2e+02 Score=24.73 Aligned_cols=154 Identities=12% Similarity=0.007 Sum_probs=85.8
Q ss_pred CcEEEEEEcCCeEEEEECCCCc-------eeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcc--cCCCcc---
Q 018293 135 RNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR--ISTHSG--- 202 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~--- 202 (358)
..+++..+.+|.++--.+.... ....++. .+.+..+...... ..++..+..|.+..+... .-....
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~-d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAG-DDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTT-CEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCC-CEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 4689999999999998875422 2223333 3445555444444 567788889998888776 221110
Q ss_pred -----ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEE
Q 018293 203 -----FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 277 (358)
Q Consensus 203 -----~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~ 277 (358)
........|.++...+ .+..++..+..|.++.-.+.................+......+..+...... ..++
T Consensus 187 ~Gv~~i~L~~~d~Vv~~~~~~-~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~-~~i~ 264 (327)
T 3uc1_A 187 SGVQGMRFNIDDRLLSLNVVR-EGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDD-SELY 264 (327)
T ss_dssp BCEESSCCCTTCCEEEEEECC-TTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTT-CEEE
T ss_pred CCeeeecCCCCCEEEEEEEEC-CCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCC-ccEE
Confidence 1112234566655554 33478888899999988876543211000011111122212334444444333 4566
Q ss_pred EEeCCCcEEEEecCC
Q 018293 278 TGSTDKMVKLWDLSN 292 (358)
Q Consensus 278 ~~~~dg~i~i~d~~~ 292 (358)
..+.+|.+.-++...
T Consensus 265 l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 265 AVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEGGGCEEEEEGGG
T ss_pred EEcCCCeEEEEehhh
Confidence 667788877777654
No 378
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=44.52 E-value=1.3e+02 Score=26.89 Aligned_cols=62 Identities=13% Similarity=0.098 Sum_probs=39.7
Q ss_pred ceeEEEecCCCCcEEE-EEeC-----------CCcEEEEecCCCCceeeEecCCCCceeEEEEEcCCCCeEEEEEc
Q 018293 262 AVCTISYNPLVPNLLA-TGST-----------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG 325 (358)
Q Consensus 262 ~i~~i~~~~~~~~~l~-~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 325 (358)
....|.|.++| .+.+ +=.. ...+..++..+++...+.. ......++.++|+||++.++++.-
T Consensus 477 sPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~-~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe-CCCCccccCCEECCCCCEEEEEEe
Confidence 35679999988 5555 3211 1256677777776433332 223457899999999998776653
No 379
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=39.86 E-value=1.4e+02 Score=23.84 Aligned_cols=154 Identities=14% Similarity=0.041 Sum_probs=83.0
Q ss_pred CcEEEEEEcCCeEEEEECCCC-------ceeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEEcccCCCcc-----
Q 018293 135 RNILASASADKQVKIWDVAAG-------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG----- 202 (358)
Q Consensus 135 ~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----- 202 (358)
..+++..+.+|.++--.+... .....+..+ +.+..+...... ..++..+.+|.+..++...-....
T Consensus 109 ~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~-~~i~l~T~~G~~irf~~~~v~~~gr~a~G 186 (307)
T 1zi0_A 109 GVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE-DEVMLFSAEGKVVRFKESSVRAMGCNTTG 186 (307)
T ss_dssp TCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT-CEEEEEETTSEEEEEEGGGSCBCCTTCCC
T ss_pred CcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC-CEEEEECCCCcEEEEEHHHcCccCCCCCC
Confidence 457888999999999877422 122223333 455555444444 567778888988888765322111
Q ss_pred ---ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEE
Q 018293 203 ---FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 279 (358)
Q Consensus 203 ---~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~ 279 (358)
........|..+...++ ...+++.+..|.++-.++.......-.........+....+.+..+....+. ..++..
T Consensus 187 v~~i~L~~~d~Vv~~~~~~~-~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~-~~l~~~ 264 (307)
T 1zi0_A 187 VRGIRLGEGDKVVSLIVPRG-DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDC-DQIMMI 264 (307)
T ss_dssp EECCCCCTTCCEEEEECCCS-SCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTT-CEEEEE
T ss_pred eEeEEeCCCCEEEEEEEecC-CCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCC-ceEEEE
Confidence 01122345656554442 3468888899999888875432111000011111222223445444443333 445566
Q ss_pred eCCCcEEEEecCC
Q 018293 280 STDKMVKLWDLSN 292 (358)
Q Consensus 280 ~~dg~i~i~d~~~ 292 (358)
+.+|.+.-++...
T Consensus 265 t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 265 TDAGTLVRTRVSE 277 (307)
T ss_dssp ESSCCEEEEEGGG
T ss_pred cCCCcEEEEeccc
Confidence 6777776666654
No 380
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=39.45 E-value=1.6e+02 Score=24.37 Aligned_cols=157 Identities=12% Similarity=0.070 Sum_probs=85.3
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 142 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 142 (358)
|+..++++.+.+|.|+--.+........ ..+......+. ..+.+..+..... ...|+..+
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r------------------~g~g~~~~~lk-e~D~l~~~~~~~t-~d~ll~fT 64 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRR------------------GGRGRSAASTK-EEDFIDQLWLVNT-HDTLLTFT 64 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCC------------------CCCCSEEEECS-CCCCEEEEEEECT-TCEEEEEE
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhcc------------------CCCCceecccC-CCCEEEEEEEecC-CCEEEEEe
Confidence 5677999999999999776654322110 00000111122 2344555544444 34566667
Q ss_pred cCCeEEEEECC---------CCceeee---ecccccceeeEEEcC--CCCcEEEEEeCCCcEEEEEcccCCCcc------
Q 018293 143 ADKQVKIWDVA---------AGKCNLT---LEHHTDKVQAVAWNH--HSPQILLSGSFDRSVVMKDARISTHSG------ 202 (358)
Q Consensus 143 ~dg~v~iwd~~---------~~~~~~~---~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~------ 202 (358)
..|.+.-+... .|..+.. +. ....|.++...+ +...+++.++..|.++...+..-....
T Consensus 65 ~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~a 143 (370)
T 3l6v_A 65 SSGKVFWLPVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIA 143 (370)
T ss_dssp TTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEES
T ss_pred CCCeEEEEEHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEE
Confidence 77876655532 2222221 22 234555554332 122689999999999998875432211
Q ss_pred ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccC
Q 018293 203 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 241 (358)
Q Consensus 203 ~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~ 241 (358)
........+..+.... +...++..+.+|.+..+....-
T Consensus 144 i~L~~~d~lv~v~~~~-~~~~i~l~T~~G~~irf~~~~v 181 (370)
T 3l6v_A 144 INLDEGDALVGVALTD-GDRDVLLFASNGKTVRFGESTV 181 (370)
T ss_dssp SCCCTTCCEEEEEEEC-SCCEEEEEETTSEEEEEEGGGS
T ss_pred EEeCCCCEEEEEEEeC-CCceEEEEeCCCeEEEEEcccc
Confidence 1112233444444443 3446778888999888887653
No 381
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=39.10 E-value=1.3e+02 Score=26.75 Aligned_cols=63 Identities=14% Similarity=0.171 Sum_probs=40.4
Q ss_pred ccEEEEecCCCCCcEEEEEEc------------CCeEEEEECCCCceeeeecc-cccceeeEEEcCCCCcEEEEEeC
Q 018293 123 DSVLGLAWNKEFRNILASASA------------DKQVKIWDVAAGKCNLTLEH-HTDKVQAVAWNHHSPQILLSGSF 186 (358)
Q Consensus 123 ~~v~~~~~~~~~~~~l~s~~~------------dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~ 186 (358)
.....|.|.++| .+.++... ...|..++..+++....+.. ....++.++|+||+..+++....
T Consensus 476 nsPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 476 NSPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 467889999995 45542211 12577777777776555543 23578999999999545554433
No 382
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=38.73 E-value=1.4e+02 Score=23.44 Aligned_cols=163 Identities=15% Similarity=0.064 Sum_probs=91.2
Q ss_pred cccEEEEecCCC-CCcEEEEEEcCCeEEEEECCCCc------eeeeecccccceeeEEEcCCCCcEEEEEeCCCcEEEEE
Q 018293 122 TDSVLGLAWNKE-FRNILASASADKQVKIWDVAAGK------CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 194 (358)
Q Consensus 122 ~~~v~~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 194 (358)
...|..+.. ++ ....++..+.+|.++-..+..-. ....++. .+.+..+...... ..++..+..|.+..+.
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~-~~ill~T~~G~~~r~~ 143 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDE-THILLFTKKGRVARFS 143 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSS-CEEEEEETTSEEEEEE
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCC-CEEEEEECCCEEEEEE
Confidence 345555533 31 24588999999999999875432 2222332 3455555555444 5688888899988887
Q ss_pred cccCCCcc--------ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEE
Q 018293 195 ARISTHSG--------FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 266 (358)
Q Consensus 195 ~~~~~~~~--------~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 266 (358)
...-.... ........+..+...++ +..++..+..|.++...+..-...... .+-+..+ .....+..+
T Consensus 144 ~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~-~~~ll~~T~~G~~kr~~~~e~~~~~R~--gkGv~~i-~~~~~lv~~ 219 (276)
T 3no0_A 144 VREVPPSTPGARGVQGIKLEKNDETSGLRIWNG-EPYLLVITAKGRVKKISHEEIPKTNRG--VKGTEVS-GTKDTLVDL 219 (276)
T ss_dssp GGGSCBCCTTCCCEECCCCCTTCCEEEEEEESS-CSEEEEEETTSCEEEEEGGGSCCCCTT--CCCEECC-CSSSCEEEE
T ss_pred hhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCC-CCEEEEEeCCCcEEEeEHHHcccCCCC--CcceEEE-cCCCcEEEE
Confidence 64322110 01122344555544442 347888889999998887654322110 0112222 223445444
Q ss_pred EecCCCCcEEEEEeCCCcEEE--EecCC
Q 018293 267 SYNPLVPNLLATGSTDKMVKL--WDLSN 292 (358)
Q Consensus 267 ~~~~~~~~~l~~~~~dg~i~i--~d~~~ 292 (358)
...... ..++..+.+|.+.. ++...
T Consensus 220 ~~~~~~-~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 220 IPIKEE-VELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEESSE-EEEEEEETTSCEEEEEEEGGG
T ss_pred EEeCCC-CEEEEEcCCCeEEEeeeCHHH
Confidence 433323 46666777888877 77654
No 383
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=38.40 E-value=2.1e+02 Score=25.41 Aligned_cols=156 Identities=15% Similarity=0.179 Sum_probs=84.7
Q ss_pred CcccEEEEecCCCCCcEEEEEEcCCe----------------------------EEEEECCCCceeeeeccc--ccc---
Q 018293 121 HTDSVLGLAWNKEFRNILASASADKQ----------------------------VKIWDVAAGKCNLTLEHH--TDK--- 167 (358)
Q Consensus 121 h~~~v~~~~~~~~~~~~l~s~~~dg~----------------------------v~iwd~~~~~~~~~~~~~--~~~--- 167 (358)
|-..+....|..+|..-++....+|+ +.++|=.+|+.+.++.-. ...
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~~~p~rg~~~~ 256 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVSD 256 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCCGGG
T ss_pred ccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEecccCCCCCCcccc
Confidence 66678888999998888888888776 788888888877665421 111
Q ss_pred ------------eeeEEEcCCCCcEEEEEe---CCCcEEEEEcccCCCccceeee--------------cCCeeeEEEcC
Q 018293 168 ------------VQAVAWNHHSPQILLSGS---FDRSVVMKDARISTHSGFKWAV--------------AADVESLAWDP 218 (358)
Q Consensus 168 ------------v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~--------------~~~i~~~~~~~ 218 (358)
..++++.......++.+- ....+..||.+.++... .+.. ...+....+.-
T Consensus 257 WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~-~W~~d~~~~~~~~~~gqg~h~~~vaDVDg 335 (591)
T 2zux_A 257 WGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSK-LWTLDSSKSGNEAFAGQGNHNLSIADVDG 335 (591)
T ss_dssp GTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEE-EEEEETTSTTCGGGSSCCCSCCEEECCSS
T ss_pred cccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEE-EEEecCCCCCcccccccCCCCCeeEeCCC
Confidence 223333221112222222 12246777776554322 1111 12334444555
Q ss_pred CCCCeEEEEe----cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCC-cEEEEEeCCC----cEEEEe
Q 018293 219 HAEHSFVVSL----EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-NLLATGSTDK----MVKLWD 289 (358)
Q Consensus 219 ~~~~~~~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~~l~~~~~dg----~i~i~d 289 (358)
++..-++.|+ .||++ +|... .+|...+....|.|+.+ ..++.+.+++ -..+.|
T Consensus 336 DG~dEIv~Gs~~iD~dG~~-L~st~-----------------~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~d 397 (591)
T 2zux_A 336 DGKDEIIFGSMAVDHDGKG-MYSTG-----------------LGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRD 397 (591)
T ss_dssp SSSCEEEETTEEECTTSCE-EEECS-----------------CCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEE
T ss_pred CCCceEEEeeeEECCCCCE-eeeCC-----------------CCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEE
Confidence 5555666543 34433 34432 25666677777777642 3455554431 345677
Q ss_pred cCCCCc
Q 018293 290 LSNNQP 295 (358)
Q Consensus 290 ~~~~~~ 295 (358)
..+++.
T Consensus 398 A~tG~v 403 (591)
T 2zux_A 398 AATGKI 403 (591)
T ss_dssp TTTCCE
T ss_pred CCCCcE
Confidence 777773
No 384
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=37.83 E-value=1.3e+02 Score=27.04 Aligned_cols=59 Identities=17% Similarity=0.209 Sum_probs=38.0
Q ss_pred cEEEEecCCCCCcEEEEEEcC------------CeEEEEECCCCceeeeecc-cccceeeEEEcCCCCcEEEE
Q 018293 124 SVLGLAWNKEFRNILASASAD------------KQVKIWDVAAGKCNLTLEH-HTDKVQAVAWNHHSPQILLS 183 (358)
Q Consensus 124 ~v~~~~~~~~~~~~l~s~~~d------------g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~ 183 (358)
..-.|.|+|.| .++++-..+ ..+.+.+..+++..+.+.. ...+++.++|+|++..+++.
T Consensus 477 ~PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45778999994 455443321 2466667777776555543 34789999999998444443
No 385
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=36.67 E-value=1.6e+02 Score=23.53 Aligned_cols=249 Identities=11% Similarity=0.059 Sum_probs=122.1
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 142 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 142 (358)
|+...+++.+.+|.|+--.+.+.+..... ........+..+ +.+..+..... ...|+..+
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~------------------~~g~~~~~~ke~-D~l~~~~~~~~-~~~ll~fT 60 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRG------------------GKGKSAARIKEE-DFIDRLLVANT-HDHILCFS 60 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------------------------CCEEEEEEEET-TCEEEEEE
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccC------------------CCCceeeeeCCC-CEEEEEEEECC-CCEEEEEE
Confidence 35567888999999987766543221100 000000112222 23333333323 34566667
Q ss_pred cCCeEEEEECC---------CCceee---eecccccceeeEEEc---CCCCcEEEEEeCCCcEEEEEcccCCCcc-----
Q 018293 143 ADKQVKIWDVA---------AGKCNL---TLEHHTDKVQAVAWN---HHSPQILLSGSFDRSVVMKDARISTHSG----- 202 (358)
Q Consensus 143 ~dg~v~iwd~~---------~~~~~~---~~~~~~~~v~~~~~~---~~~~~~l~~~~~dg~i~i~d~~~~~~~~----- 202 (358)
..|.+.-.... .|.++. .+. ....|.++... .++ .+++..+.+|.++...+..-....
T Consensus 61 ~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~-~~ll~~T~~G~~Krt~l~e~~~~~r~G~~ 138 (307)
T 1zi0_A 61 SRGRVYSMKVYQLPEATRGARGRPIVNLLPLE-QDERITAILPVTEFEEG-VKVFMATANGTVKKTVLTEFNRLRTAGKV 138 (307)
T ss_dssp TTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTT-CEEEEEETTSEEEEEEGGGGTTCCTTCEE
T ss_pred CCCEEEEEEhhHCcCCCCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCC-cEEEEEeCCCeEEEEEHHHhhccccCCeE
Confidence 77876655542 222221 122 23455555432 233 578899999999998875332211
Q ss_pred -ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC
Q 018293 203 -FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 281 (358)
Q Consensus 203 -~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 281 (358)
........+..+.... +...++..+.+|.+..+....-..............+. ....|.++...+++ ..+++.+.
T Consensus 139 ~i~l~~~d~lv~~~~~~-~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~-~~ll~~T~ 215 (307)
T 1zi0_A 139 AIKLVDGDELIGVDLTS-GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGD-GAILTATQ 215 (307)
T ss_dssp SSCCCTTCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSS-CEEEEEET
T ss_pred EEEECCCCEEEEEEEeC-CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCC-CEEEEEEc
Confidence 1111224444444443 34467788889998888876532211100011111222 23456666555444 56888899
Q ss_pred CCcEEEEecCCCC-------ceeeEecCCCCceeEEEEEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 282 DKMVKLWDLSNNQ-------PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 282 dg~i~i~d~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
.|.++-.++..-. -.....+....+.+..+....+... ++..+.+|.+.-+.+..
T Consensus 216 ~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~-l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 216 NGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQ-IMMITDAGTLVRTRVSE 277 (307)
T ss_dssp TSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCE-EEEEESSCCEEEEEGGG
T ss_pred CCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCce-EEEEcCCCcEEEEeccc
Confidence 9999888774321 0111122222244544444333343 34456677777677654
No 386
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=32.75 E-value=13 Score=31.09 Aligned_cols=27 Identities=22% Similarity=0.555 Sum_probs=19.9
Q ss_pred EEccCCeEEEEEccCCCccccccccCc
Q 018293 323 IGGSKGKLEIWDTLSDAGISNRFSKYS 349 (358)
Q Consensus 323 ~~~~dg~i~vw~~~~~~~~~~~~~~~~ 349 (358)
.+..+|.|+|||+.+.+.+...|+..+
T Consensus 162 ~~~~~GVVrvWDVkd~slLnNQFGsmP 188 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELLNNQFGTMP 188 (577)
T ss_dssp ----CCEECSEECSCGGGGTTCSCCCH
T ss_pred CCCCCCeEEEEecCCHHHHhhhcCCch
Confidence 567799999999999998888777643
No 387
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=31.13 E-value=1.9e+02 Score=25.23 Aligned_cols=70 Identities=11% Similarity=0.122 Sum_probs=40.1
Q ss_pred ceeEEEecCC----C-CcEEEEEeCCCcEEEEec-CCCC-----ceeeEecC--CCCceeEEEEEcCCCCeEEEEEccCC
Q 018293 262 AVCTISYNPL----V-PNLLATGSTDKMVKLWDL-SNNQ-----PSCIASRN--PKAGAVFSVAFSEDSPFVLAIGGSKG 328 (358)
Q Consensus 262 ~i~~i~~~~~----~-~~~l~~~~~dg~i~i~d~-~~~~-----~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg 328 (358)
..++|+...- + -..+..|+.+|.|.=.-+ .... ...+.++. ....+|..|.+++++.+ |..++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~-Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQ-LYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTE-EEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCE-EEEEECCe
Confidence 3566665531 2 146778999998643333 2221 11222222 23578999999999987 55677777
Q ss_pred eEEE
Q 018293 329 KLEI 332 (358)
Q Consensus 329 ~i~v 332 (358)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 388
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=29.96 E-value=2.2e+02 Score=25.46 Aligned_cols=58 Identities=9% Similarity=0.104 Sum_probs=35.4
Q ss_pred cEEEEEeCCCcEEEE-ecCCCC---ceeeEecC--CCCceeEEEEEcCCCCeEEEEEccCCeEEE
Q 018293 274 NLLATGSTDKMVKLW-DLSNNQ---PSCIASRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEI 332 (358)
Q Consensus 274 ~~l~~~~~dg~i~i~-d~~~~~---~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 332 (358)
..+..|+.+|.|.-. ...... ...+.++. ....+|..|.++++..+ |..++.++.++|
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~-LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRK-LYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTE-EEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCE-EEEEecceEEEc
Confidence 467789999997543 332221 22222332 24568899999999886 555666665554
No 389
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=29.90 E-value=70 Score=23.36 Aligned_cols=36 Identities=11% Similarity=0.198 Sum_probs=27.8
Q ss_pred CCceeEEEEEcCCCCeEEEEEccCCeEEEEEccCCC
Q 018293 304 KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 339 (358)
Q Consensus 304 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 339 (358)
....+.++.|...+.+-+++...+|++.++|.+=|+
T Consensus 117 g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 117 GRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp TCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CCceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 355577778877666678888889999999987665
No 390
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=27.93 E-value=2.1e+02 Score=26.15 Aligned_cols=58 Identities=12% Similarity=0.207 Sum_probs=34.8
Q ss_pred cEEEEEeCCCcEE-EEecCCCC-----ceeeE--ecCCCCceeEEEEEcCCCCeEEEEEccCCeEEE
Q 018293 274 NLLATGSTDKMVK-LWDLSNNQ-----PSCIA--SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEI 332 (358)
Q Consensus 274 ~~l~~~~~dg~i~-i~d~~~~~-----~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 332 (358)
..++.|+.+|.|. +....... ...+. .......+|..|.++++.++ |..++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~-LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQ-LYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTE-EEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCE-EEEEECCEEEEE
Confidence 3677899999864 43332221 11121 22234568999999999996 556777765554
No 391
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=27.06 E-value=3.4e+02 Score=24.17 Aligned_cols=70 Identities=11% Similarity=0.138 Sum_probs=41.0
Q ss_pred ceeEEEecC----CC-CcEEEEEeCCCcEE-EEecCC-----CCceeeEecCC-----------CCceeEEEEEcCCCCe
Q 018293 262 AVCTISYNP----LV-PNLLATGSTDKMVK-LWDLSN-----NQPSCIASRNP-----------KAGAVFSVAFSEDSPF 319 (358)
Q Consensus 262 ~i~~i~~~~----~~-~~~l~~~~~dg~i~-i~d~~~-----~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~ 319 (358)
..+.|+... ++ ...++.|+.+|.|. +..... .+...+.++.. ...+|..|.++++..+
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 356777664 11 24678899999974 443321 11122222211 1457889999999886
Q ss_pred EEEEEccCCeEEE
Q 018293 320 VLAIGGSKGKLEI 332 (358)
Q Consensus 320 ~l~~~~~dg~i~v 332 (358)
|..++.++.++|
T Consensus 484 -LYV~s~~~V~qV 495 (565)
T 3oky_B 484 -LYVAFSTCVIKV 495 (565)
T ss_dssp -EEEECSSCEEEE
T ss_pred -EEEEecCeEEEe
Confidence 555777776665
No 392
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=25.82 E-value=90 Score=22.82 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=30.4
Q ss_pred CCcccEEEEecCCCCCcEEEEEEcCCeEEEEECCCCce
Q 018293 120 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC 157 (358)
Q Consensus 120 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 157 (358)
.+..-+.++.|...+..-+++.+.+|++.++|.+-|+.
T Consensus 116 ~g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 116 SGRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp TTCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred CCCceEEEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 44666778888877667788888999999999987753
No 393
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=25.10 E-value=2.7e+02 Score=22.46 Aligned_cols=245 Identities=7% Similarity=0.032 Sum_probs=124.1
Q ss_pred CCCceEEecCCCCeEEEEEcccccCcCceeecCCcccccccccccCCceeccccccCCCcccEEEEecCCCCCcEEEEEE
Q 018293 63 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 142 (358)
Q Consensus 63 ~~~~~l~~g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 142 (358)
|+...+++.+.+|.|+--.+...+.... ....+... +.+..+..... ...|+..+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~-----------------------~~~~lke~-D~l~~~~~~~t-~d~ll~fT 57 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNG-----------------------QDFAMKDT-DRLLAMLEMNT-KDVLLLFT 57 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTT-----------------------CCCCCCTT-CCEEEEEEEET-TSEEEEEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCc-----------------------cccccCCC-CEEEEEEEECC-CCEEEEEE
Confidence 5677889999999999877653321110 00112222 33433333333 34666777
Q ss_pred cCCeEEEEECC---------CCceeee---ecccccceeeEEEcCC--CCcEEEEEeCCCcEEEEEcccCCCcc------
Q 018293 143 ADKQVKIWDVA---------AGKCNLT---LEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHSG------ 202 (358)
Q Consensus 143 ~dg~v~iwd~~---------~~~~~~~---~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~------ 202 (358)
..|.+.-.... .|.++.. +. ....|.++...++ ...+++..+.+|.++...+..-....
T Consensus 58 ~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ 136 (323)
T 1wp5_A 58 NKGNYLYCPVHELPDIRWKDLGQHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLT 136 (323)
T ss_dssp TTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEE
T ss_pred CCCEEEEEEHHHCcCCCCCCCCcChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceE
Confidence 78876665542 2222211 22 2334555433232 12578899999999998875332211
Q ss_pred -ceeeecCCeeeEEEcCCCCCeEEEEecCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcEEEEEeC
Q 018293 203 -FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 281 (358)
Q Consensus 203 -~~~~~~~~i~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 281 (358)
........+..+.... +...++..+.+|.+..+....-..............+. ....|.++...+++...+++.+.
T Consensus 137 ai~l~e~d~lv~~~~~~-~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~ 214 (323)
T 1wp5_A 137 GINLKNDDQVVDVHLTD-GMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQ 214 (323)
T ss_dssp CSCCCTTCCEEEEEEEC-SCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEET
T ss_pred EEEeCCCCEEEEEEEeC-CCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEEC
Confidence 1111224444444443 34467888899999888886532211101011111222 23446666544444226888888
Q ss_pred CCcEEEEecCCCCc-----eeeEec---CCCCceeEEE-EEcCCCCeEEEEEccCCeEEEEEccC
Q 018293 282 DKMVKLWDLSNNQP-----SCIASR---NPKAGAVFSV-AFSEDSPFVLAIGGSKGKLEIWDTLS 337 (358)
Q Consensus 282 dg~i~i~d~~~~~~-----~~~~~~---~~~~~~v~~~-~~~~~~~~~l~~~~~dg~i~vw~~~~ 337 (358)
.|..+..++..-.. .-+... ......+..+ .+.++.. ++..+.+|.+....+..
T Consensus 215 ~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~--i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 215 RGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDT--IYLQTEKSFIETIKVGD 277 (323)
T ss_dssp TSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCE--EEEEETTSCEEEEEGGG
T ss_pred CCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCe--EEEEeCCCeEEEEEhhh
Confidence 99888877654110 011111 1112244433 3333333 33456677766666654
No 394
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=22.90 E-value=4.2e+02 Score=23.82 Aligned_cols=177 Identities=15% Similarity=0.187 Sum_probs=92.3
Q ss_pred CcccEEEEecCCCCCcEEEEEEcCCe----------------------------EEEEECCCCceeeeeccc--ccc---
Q 018293 121 HTDSVLGLAWNKEFRNILASASADKQ----------------------------VKIWDVAAGKCNLTLEHH--TDK--- 167 (358)
Q Consensus 121 h~~~v~~~~~~~~~~~~l~s~~~dg~----------------------------v~iwd~~~~~~~~~~~~~--~~~--- 167 (358)
|-..+....|..+|..-++....+|+ +.++|=.+|+.+.++.-. ...
T Consensus 181 hyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~eyL~vfdG~TG~~l~t~~~~p~rg~~~~ 260 (620)
T 2zuy_A 181 HYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPEYLTVFKGETGEALTTVEYEPPRGKLED 260 (620)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCSGGG
T ss_pred ccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCeEEEEEcCCCcceeeecccCCCcCcccc
Confidence 66788888899998778888877776 488887788776655321 111
Q ss_pred ------------eeeEEEcCC-CCcEEEEEe--CCCcEEEEEcccCCCccceeeec--------------CCeeeEEEcC
Q 018293 168 ------------VQAVAWNHH-SPQILLSGS--FDRSVVMKDARISTHSGFKWAVA--------------ADVESLAWDP 218 (358)
Q Consensus 168 ------------v~~~~~~~~-~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~--------------~~i~~~~~~~ 218 (358)
..++++... .+..+++-+ ....+..||.+.++... .+... ..+....+.-
T Consensus 261 WGD~yGnR~drf~~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~-~W~~ds~~~~~~~~~gqg~H~~svaDVDG 339 (620)
T 2zuy_A 261 WGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKK-RWVFDSNQPGHEAYAGQGNHSLSVADVDG 339 (620)
T ss_dssp GTSSSSTTTTCEEEEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEE-EEEEETTSTTCGGGTTCCCSSCEEECCSS
T ss_pred ccccccccccccceeEEecCCCCceEEEecCcccceeEEEEEccCCceee-eeEecCCCCcccccccccCcCceEEecCC
Confidence 223333221 112222221 12345667765543221 11111 1233344455
Q ss_pred CCCCeEEEEe----cCCeEEEEEcccCCCCCCCCCCCccEEEeecCCceeEEEecCCCCcE-EEEEeCC----CcEEEEe
Q 018293 219 HAEHSFVVSL----EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL-LATGSTD----KMVKLWD 289 (358)
Q Consensus 219 ~~~~~~~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~-l~~~~~d----g~i~i~d 289 (358)
++...++.|+ .||++ +|... .+|...+.--.|.|+.+.+ ++.+.++ .-..++|
T Consensus 340 DG~dEIv~Gs~~iD~dG~~-L~st~-----------------~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~D 401 (620)
T 2zuy_A 340 DGKDEIIYGAMAVDHDGTG-LYSTG-----------------LGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRD 401 (620)
T ss_dssp SSSCEEEETTEEECTTSSE-EEECS-----------------CCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEE
T ss_pred CCceeEEEeeeEECCCCCE-EeecC-----------------CCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEE
Confidence 5555566543 23332 33321 2577777777788875443 4444443 1467789
Q ss_pred cCCCCceeeEecCCCCceeEEEEEcCC
Q 018293 290 LSNNQPSCIASRNPKAGAVFSVAFSED 316 (358)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~v~~~~~~~~ 316 (358)
.++++.+-......+.+......|.|+
T Consensus 402 A~tG~vlw~~~~~~D~Gr~~~~Didp~ 428 (620)
T 2zuy_A 402 AGTGEILWGVHAGTDVGRGMAAHIDPS 428 (620)
T ss_dssp TTTCCEEEEECCSSCCCEEEEECCCTT
T ss_pred CCCCcEEEEecCcccCCceEEEecCCC
Confidence 888884322222234445555555554
No 395
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=22.86 E-value=1.5e+02 Score=27.02 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=35.3
Q ss_pred CeEEEEecCCeEE-EEEcccCCCCCCCCCCCccEEE--eecCCceeEEEecCCCCcEEEEEeCCCcEEE
Q 018293 222 HSFVVSLEDGTIK-GFDIRTAKSDPDSTSQQSSFTL--HAHDKAVCTISYNPLVPNLLATGSTDKMVKL 287 (358)
Q Consensus 222 ~~~~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~--~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i 287 (358)
..++.|+.+|.|. +.-........ .....+..+ .....+|..+.++++. ..|++++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~--~~~~~leEi~v~~~~~pI~~L~ld~~~-~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHD--LEEVLLEEMTVFREPTTISAMELSTKQ-QQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC--------CEEEEEEEEECSSSCCCCCEEEEETTT-TEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccc--cceEEEEEEeecCCCceeeeEEEcCCC-CEEEEEECCEEEEE
Confidence 3577889999875 33222211000 000111122 1345678999999987 78888888776655
No 396
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.60 E-value=3.4e+02 Score=23.61 Aligned_cols=56 Identities=11% Similarity=0.029 Sum_probs=36.7
Q ss_pred cEEEEEEcCCeEEEEECCCC-c-------eeeeecc--cccceeeEEEcCCCCcEEEEEeCCCcEEE
Q 018293 136 NILASASADKQVKIWDVAAG-K-------CNLTLEH--HTDKVQAVAWNHHSPQILLSGSFDRSVVM 192 (358)
Q Consensus 136 ~~l~s~~~dg~v~iwd~~~~-~-------~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 192 (358)
..++.|..+|.|.-.-+... . .+..+.- ...+|..|.++++. ..|++++.++.+++
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~-~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQ-QQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTT-TEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCC-CEEEEEECCeEEEE
Confidence 46788899998754433211 1 2223332 35789999999987 78888888776654
Done!