Your job contains 1 sequence.
>018294
MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE
RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY
TETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY
DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE
FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV
EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSNRVS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018294
(358 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059289 - symbol:FUS12 "FUSCA 12" species:3702... 1547 8.6e-159 1
UNIPROTKB|E2REA8 - symbol:COPS2 "Uncharacterized protein"... 1208 7.2e-123 1
UNIPROTKB|P61201 - symbol:COPS2 "COP9 signalosome complex... 1208 7.2e-123 1
MGI|MGI:1330276 - symbol:Cops2 "COP9 (constitutive photom... 1208 7.2e-123 1
RGD|628791 - symbol:Cops2 "COP9 signalosome subunit 2" sp... 1208 7.2e-123 1
UNIPROTKB|P61203 - symbol:Cops2 "COP9 signalosome complex... 1208 7.2e-123 1
ZFIN|ZDB-GENE-040625-15 - symbol:cops2 "COP9 constitutive... 1205 1.5e-122 1
UNIPROTKB|G3X736 - symbol:COPS2 "Uncharacterized protein"... 1199 6.5e-122 1
DICTYBASE|DDB_G0289361 - symbol:csn2 "proteasome componen... 1197 1.1e-121 1
FB|FBgn0013746 - symbol:alien "alien" species:7227 "Droso... 1106 4.6e-112 1
UNIPROTKB|F1SQG5 - symbol:COPS2 "Uncharacterized protein"... 1055 1.2e-106 1
WB|WBGene00000814 - symbol:csn-2 species:6239 "Caenorhabd... 973 5.8e-98 1
UNIPROTKB|O01422 - symbol:csn-2 "COP9 signalosome complex... 973 5.8e-98 1
ASPGD|ASPL0000076227 - symbol:csnB species:162425 "Emeric... 948 2.6e-95 1
UNIPROTKB|G5EHS2 - symbol:MGCH7_ch7g1103 "COP9 signalosom... 919 3.0e-92 1
POMBASE|SPAPB17E12.04c - symbol:csn2 "COP9/signalosome co... 777 3.4e-77 1
CGD|CAL0004448 - symbol:orf19.1400 species:5476 "Candida ... 307 2.1e-26 1
UNIPROTKB|Q59YC7 - symbol:CSN2 "Potential COP9 signalosom... 307 2.1e-26 1
UNIPROTKB|F1RKW8 - symbol:PSMD11 "Uncharacterized protein... 265 6.1e-23 1
ZFIN|ZDB-GENE-030131-2711 - symbol:psmd11a "proteasome (p... 266 8.6e-23 1
UNIPROTKB|Q2KI42 - symbol:PSMD11 "26S proteasome non-ATPa... 265 1.1e-22 1
UNIPROTKB|E2RJ26 - symbol:PSMD11 "Uncharacterized protein... 265 1.1e-22 1
UNIPROTKB|O00231 - symbol:PSMD11 "26S proteasome non-ATPa... 265 1.1e-22 1
MGI|MGI:1916327 - symbol:Psmd11 "proteasome (prosome, mac... 265 1.1e-22 1
RGD|1306450 - symbol:Psmd11 "proteasome (prosome, macropa... 265 1.1e-22 1
ZFIN|ZDB-GENE-030131-984 - symbol:psmd11b "proteasome (pr... 257 9.4e-22 1
DICTYBASE|DDB_G0281315 - symbol:psmD11 "26S proteasome no... 256 1.1e-21 1
UNIPROTKB|F6XBL2 - symbol:psmd11 "26S proteasome non-ATPa... 254 2.1e-21 1
FB|FBgn0028689 - symbol:Rpn6 "Regulatory particle non-ATP... 249 2.3e-20 1
POMBASE|SPAC23G3.11 - symbol:rpn6 "19S proteasome regulat... 237 3.2e-18 1
TAIR|locus:2030017 - symbol:ATS9 "AT1G29150" species:3702... 235 6.1e-18 1
CGD|CAL0003109 - symbol:RPN6 species:5476 "Candida albica... 233 1.3e-17 1
WB|WBGene00004462 - symbol:rpn-6.1 species:6239 "Caenorha... 220 6.3e-16 1
UNIPROTKB|Q20938 - symbol:rpn-6.1 "Probable 26S proteasom... 220 6.3e-16 1
ASPGD|ASPL0000014128 - symbol:AN10519 species:162425 "Eme... 207 2.2e-14 1
UNIPROTKB|G4NAA5 - symbol:MGG_03211 "26S proteasome non-A... 206 2.9e-14 1
SGD|S000002255 - symbol:RPN6 "Essential, non-ATPase regul... 205 4.1e-14 1
GENEDB_PFALCIPARUM|PF14_0025 - symbol:PF14_0025 "proteoso... 158 3.0e-08 2
UNIPROTKB|Q8IM66 - symbol:PF14_0025 "Proteosome subunit, ... 158 3.0e-08 2
FB|FBgn0027054 - symbol:CSN4 "COP9 complex homolog subuni... 110 4.3e-05 2
WB|WBGene00000813 - symbol:csn-1 species:6239 "Caenorhabd... 125 9.3e-05 1
UNIPROTKB|Q9GS00 - symbol:csn-1 "COP9 signalosome complex... 125 9.3e-05 1
UNIPROTKB|P68353 - symbol:CSN2 "COP9 signalosome complex ... 64 0.00017 2
>TAIR|locus:2059289 [details] [associations]
symbol:FUS12 "FUSCA 12" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0030163
"protein catabolic process" evidence=TAS] [GO:0008180 "signalosome"
evidence=TAS;IPI] [GO:0009640 "photomorphogenesis"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0007275 GO:GO:0005829
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0030163 GO:GO:0009585
EMBL:AC005623 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 EMBL:AF395058 EMBL:AY050437 EMBL:AY133536
EMBL:AY087622 IPI:IPI00525604 PIR:D84667 RefSeq:NP_565632.1
UniGene:At.13162 ProteinModelPortal:Q8W207 SMR:Q8W207 IntAct:Q8W207
STRING:Q8W207 PaxDb:Q8W207 PRIDE:Q8W207 EnsemblPlants:AT2G26990.1
GeneID:817241 KEGG:ath:AT2G26990 TAIR:At2g26990 eggNOG:COG5159
HOGENOM:HOG000194333 InParanoid:Q8W207 KO:K12176 OMA:SNSEPDV
PhylomeDB:Q8W207 ProtClustDB:CLSN2688459 Genevestigator:Q8W207
GermOnline:AT2G26990 Uniprot:Q8W207
Length = 439
Score = 1547 (549.6 bits), Expect = 8.6e-159, P = 8.6e-159
Identities = 298/357 (83%), Positives = 319/357 (89%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
MM+AY EMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN LL+EFYQTTLKALEEAKNE
Sbjct: 82 MMEAYTEMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNTGLLQEFYQTTLKALEEAKNE 141
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTNLKLC IWFD+GEY RM+KILKELHKSCQ+EDGTDDQKKGSQLLEVYAIEIQ+Y
Sbjct: 142 RLWFKTNLKLCNIWFDIGEYRRMTKILKELHKSCQKEDGTDDQKKGSQLLEVYAIEIQIY 201
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
TET SAIPHPRIMGIIRECGGKMHMAERQW +AATDFFEAFKNY
Sbjct: 202 TETKDNKKLKQLYHKALAIKSAIPHPRIMGIIRECGGKMHMAERQWEEAATDFFEAFKNY 261
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE
Sbjct: 262 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 321
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FE+ILKSNR+TIMDDPFIRNY+EDLLK VRTQVLLKLIKPYT+I IPFISKELNVPE DV
Sbjct: 322 FERILKSNRRTIMDDPFIRNYMEDLLKKVRTQVLLKLIKPYTKIGIPFISKELNVPETDV 381
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSNRV 357
+LLVSLILD+RIDGHID++NR L RGD G K + A+DKWNSQL+SL +++RV
Sbjct: 382 TELLVSLILDSRIDGHIDEMNRYLLRGDSGNGRKLHKAVDKWNSQLKSLSSNITSRV 438
>UNIPROTKB|E2REA8 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301
CTD:9318 InterPro:IPR019280 Pfam:PF10075 EMBL:AAEX03016114
RefSeq:XP_535470.1 ProteinModelPortal:E2REA8 PRIDE:E2REA8
Ensembl:ENSCAFT00000023590 GeneID:478295 KEGG:cfa:478295
Uniprot:E2REA8
Length = 443
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 228/358 (63%), Positives = 284/358 (79%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
MM+ Y+++LTYI+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+
Sbjct: 88 MMNRYKQLLTYIRSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKND 145
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMY
Sbjct: 146 RLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMY 205
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
T SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNY
Sbjct: 206 TAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY 265
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DE+G+ RR CLKYLVLANMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ N+I E
Sbjct: 266 DESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITE 325
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKILK+N IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI IPFISKELN+ DV
Sbjct: 326 FEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADV 385
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSNRVS 358
E LLV ILDN I G IDQVN+LLE + +G +YTA+DKW +QL SL Q V ++++
Sbjct: 386 ESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA 443
>UNIPROTKB|P61201 [details] [associations]
symbol:COPS2 "COP9 signalosome complex subunit 2"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=NAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0008180 "signalosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0010388 "cullin deneddylation" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006366
GO:GO:0004871 Gene3D:1.25.40.10 GO:GO:0008180 CleanEx:HS_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN
EMBL:AF084260 EMBL:AF100762 EMBL:AF212227 EMBL:CR542063
EMBL:BC012629 EMBL:L40388 EMBL:AF120268 IPI:IPI00018813
IPI:IPI00743825 RefSeq:NP_001137359.1 RefSeq:NP_004227.1
UniGene:Hs.369614 ProteinModelPortal:P61201 SMR:P61201
DIP:DIP-42076N IntAct:P61201 MINT:MINT-1204035 STRING:P61201
PhosphoSite:P61201 DMDM:47117681 PaxDb:P61201 PRIDE:P61201
DNASU:9318 Ensembl:ENST00000299259 Ensembl:ENST00000388901
GeneID:9318 KEGG:hsa:9318 UCSC:uc001zxf.3 UCSC:uc001zxh.3
GeneCards:GC15M049417 HGNC:HGNC:30747 HPA:HPA016867 HPA:HPA018271
MIM:604508 neXtProt:NX_P61201 PharmGKB:PA134952445 GenomeRNAi:9318
NextBio:34905 ArrayExpress:P61201 Bgee:P61201 CleanEx:HS_COPS2
Genevestigator:P61201 GermOnline:ENSG00000166200 InterPro:IPR019280
Pfam:PF10075 Uniprot:P61201
Length = 443
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 228/358 (63%), Positives = 284/358 (79%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
MM+ Y+++LTYI+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+
Sbjct: 88 MMNRYKQLLTYIRSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKND 145
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMY
Sbjct: 146 RLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMY 205
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
T SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNY
Sbjct: 206 TAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY 265
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DE+G+ RR CLKYLVLANMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ N+I E
Sbjct: 266 DESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITE 325
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKILK+N IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI IPFISKELN+ DV
Sbjct: 326 FEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADV 385
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSNRVS 358
E LLV ILDN I G IDQVN+LLE + +G +YTA+DKW +QL SL Q V ++++
Sbjct: 386 ESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA 443
>MGI|MGI:1330276 [details] [associations]
symbol:Cops2 "COP9 (constitutive photomorphogenic) homolog,
subunit 2 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0010388 "cullin deneddylation" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0035914 "skeletal muscle
cell differentiation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
MGI:MGI:1330276 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0030182 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0035914 CleanEx:MM_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 CTD:9318
HOVERGEN:HBG003924 InterPro:IPR019280 Pfam:PF10075 EMBL:AF087688
EMBL:AF114247 EMBL:AF114236 EMBL:AF114237 EMBL:AF114238
EMBL:AF114239 EMBL:AF114240 EMBL:AF114241 EMBL:AF114242
EMBL:AF114244 EMBL:AF114245 EMBL:AF114246 EMBL:AK010383
EMBL:AK084421 EMBL:AK132207 EMBL:BC023096 EMBL:AF071312
IPI:IPI00120513 IPI:IPI00480307 RefSeq:NP_034069.2 UniGene:Mm.3596
ProteinModelPortal:P61202 SMR:P61202 STRING:P61202
PhosphoSite:P61202 PaxDb:P61202 PRIDE:P61202
Ensembl:ENSMUST00000028635 Ensembl:ENSMUST00000110463 GeneID:12848
KEGG:mmu:12848 ChiTaRS:COPS2 NextBio:282396 Bgee:P61202
Genevestigator:P61202 GermOnline:ENSMUSG00000027206 Uniprot:P61202
Length = 443
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 228/358 (63%), Positives = 284/358 (79%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
MM+ Y+++LTYI+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+
Sbjct: 88 MMNRYKQLLTYIRSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKND 145
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMY
Sbjct: 146 RLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMY 205
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
T SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNY
Sbjct: 206 TAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY 265
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DE+G+ RR CLKYLVLANMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ N+I E
Sbjct: 266 DESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITE 325
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKILK+N IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI IPFISKELN+ DV
Sbjct: 326 FEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADV 385
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSNRVS 358
E LLV ILDN I G IDQVN+LLE + +G +YTA+DKW +QL SL Q V ++++
Sbjct: 386 ESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA 443
>RGD|628791 [details] [associations]
symbol:Cops2 "COP9 signalosome subunit 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0010388
"cullin deneddylation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=IDA] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 228/358 (63%), Positives = 284/358 (79%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
MM+ Y+++LTYI+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+
Sbjct: 88 MMNRYKQLLTYIRSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKND 145
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMY
Sbjct: 146 RLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMY 205
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
T SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNY
Sbjct: 206 TAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY 265
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DE+G+ RR CLKYLVLANMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ N+I E
Sbjct: 266 DESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITE 325
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKILK+N IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI IPFISKELN+ DV
Sbjct: 326 FEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADV 385
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSNRVS 358
E LLV ILDN I G IDQVN+LLE + +G +YTA+DKW +QL SL Q V ++++
Sbjct: 386 ESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA 443
>UNIPROTKB|P61203 [details] [associations]
symbol:Cops2 "COP9 signalosome complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 228/358 (63%), Positives = 284/358 (79%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
MM+ Y+++LTYI+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+
Sbjct: 88 MMNRYKQLLTYIRSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKND 145
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMY
Sbjct: 146 RLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMY 205
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
T SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNY
Sbjct: 206 TAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY 265
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DE+G+ RR CLKYLVLANMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ N+I E
Sbjct: 266 DESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITE 325
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKILK+N IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI IPFISKELN+ DV
Sbjct: 326 FEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADV 385
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSNRVS 358
E LLV ILDN I G IDQVN+LLE + +G +YTA+DKW +QL SL Q V ++++
Sbjct: 386 ESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA 443
>ZFIN|ZDB-GENE-040625-15 [details] [associations]
symbol:cops2 "COP9 constitutive photomorphogenic
homolog subunit 2 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0008180
"signalosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040625-15 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
GeneTree:ENSGT00530000063301 EMBL:BC071320 IPI:IPI00488001
RefSeq:NP_001002055.1 UniGene:Dr.78251 ProteinModelPortal:Q6IQT4
STRING:Q6IQT4 PRIDE:Q6IQT4 Ensembl:ENSDART00000006124 GeneID:415145
KEGG:dre:415145 CTD:9318 HOVERGEN:HBG003924 InParanoid:Q6IQT4
OrthoDB:EOG43N7CN NextBio:20818820 ArrayExpress:Q6IQT4 Bgee:Q6IQT4
Uniprot:Q6IQT4
Length = 443
Score = 1205 (429.2 bits), Expect = 1.5e-122, P = 1.5e-122
Identities = 226/358 (63%), Positives = 285/358 (79%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
MM+ Y+++LTYI+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+
Sbjct: 88 MMNRYKQLLTYIRSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKND 145
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++ + E+G++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMY
Sbjct: 146 RLWFKTNTKLGKLYLEREEFGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMY 205
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
T SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNY
Sbjct: 206 TAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY 265
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DE+G+ RR CLKYLVLANMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ N+I E
Sbjct: 266 DESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITE 325
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKILK+N IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI IPFISKELN+ DV
Sbjct: 326 FEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADV 385
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSNRVS 358
E LLV ILDN I+G IDQVN+LLE + +G +YTA+DKW +QL SL Q + ++++
Sbjct: 386 ESLLVQCILDNTINGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAIVSKLA 443
>UNIPROTKB|G3X736 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
EMBL:DAAA02029106 UniGene:Bt.37059 ProteinModelPortal:G3X736
SMR:G3X736 PRIDE:G3X736 Ensembl:ENSBTAT00000017862 NextBio:20925241
Uniprot:G3X736
Length = 450
Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
Identities = 228/363 (62%), Positives = 284/363 (78%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN-----FSLLREFYQTTLKALE 55
MM+ Y+++LTYI+SAVTRNYSEK IN+I+D++S S + LL+EFY+TTL+AL+
Sbjct: 88 MMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQNSDFLCQMDLLQEFYETTLEALK 147
Query: 56 EAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 115
+AKN+RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+
Sbjct: 148 DAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYAL 207
Query: 116 EIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFE 175
EIQMYT SAIPHP IMG+IRECGGKMH+ E ++ A TDFFE
Sbjct: 208 EIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFE 267
Query: 176 AFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQR 235
AFKNYDE+G+ RR CLKYLVLANMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ
Sbjct: 268 AFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQN 327
Query: 236 NEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNV 295
N+I EFEKILK+N IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI IPFISKELN+
Sbjct: 328 NDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNI 387
Query: 296 PEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSN 355
DVE LLV ILDN I G IDQVN+LLE + +G +YTA+DKW +QL SL Q V +
Sbjct: 388 DVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVS 447
Query: 356 RVS 358
+++
Sbjct: 448 KLA 450
>DICTYBASE|DDB_G0289361 [details] [associations]
symbol:csn2 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0289361 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GenomeReviews:CM000154_GR EMBL:AAFI02000139
Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 KO:K12176 OMA:SNSEPDV EMBL:DQ309430
RefSeq:XP_636285.1 ProteinModelPortal:Q54HL6 STRING:Q54HL6
EnsemblProtists:DDB0233100 GeneID:8627103 KEGG:ddi:DDB_G0289361
ProtClustDB:CLSZ2429788 Uniprot:Q54HL6
Length = 449
Score = 1197 (426.4 bits), Expect = 1.1e-121, P = 1.1e-121
Identities = 227/358 (63%), Positives = 281/358 (78%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
M++++++ L Y KS+ + NY EK IN+++D VS S + ++++ + TLK+L + KNE
Sbjct: 90 MLESFKKFLPYTKSSASSNYIEKGINSVLDMVSSSNTIELDMIQKVFDLTLKSLLDTKNE 149
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
R+WF+TNLKL K+ F+ EYGR++KIL++LHKSC+ EDGTDDQKKGSQL+++YA+EIQMY
Sbjct: 150 RVWFRTNLKLAKLLFEKAEYGRLAKILRDLHKSCELEDGTDDQKKGSQLVDIYALEIQMY 209
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
TET SAIPHPRIMGIIRECGGKMHMAE++W A TDFFEAFKNY
Sbjct: 210 TETKNNKKLKDLYKKALEIKSAIPHPRIMGIIRECGGKMHMAEKEWEKAHTDFFEAFKNY 269
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DEAGN RRIQCLKYLVLA MLM S +NPFD EAKPYKNDP+ILAMTNL+ AY++N+I
Sbjct: 270 DEAGNSRRIQCLKYLVLACMLMLSTINPFDSTEAKPYKNDPDILAMTNLVMAYEKNDIYA 329
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKILK NRKTIMDDPFIR YIEDLL+N+RTQVLLKL+KPYTRIRI FISKELN+P DV
Sbjct: 330 FEKILKDNRKTIMDDPFIRMYIEDLLRNIRTQVLLKLLKPYTRIRISFISKELNIPSSDV 389
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGD-RSKGMKKYTAIDKWNSQLRSLYQTVSNRV 357
E LLVSLILDN+I G IDQVN+ LE +S KYT+I KW +Q+ L ++N++
Sbjct: 390 ESLLVSLILDNKIRGSIDQVNQQLELDTAKSSAYWKYTSIHKWANQIGQLNGGINNKL 447
>FB|FBgn0013746 [details] [associations]
symbol:alien "alien" species:7227 "Drosophila melanogaster"
[GO:0008231 "repressor ecdysone receptor complex" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IPI] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008180 "signalosome" evidence=NAS;IPI] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
GO:GO:0003714 GO:GO:0045892 GO:GO:0007095 GO:GO:0050821
GO:GO:0006911 EMBL:AE014134 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0008180 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 EMBL:AF129079
EMBL:AY069836 EMBL:AY118505 EMBL:U57758 RefSeq:NP_523517.1
RefSeq:NP_723438.1 UniGene:Dm.20642 ProteinModelPortal:Q94899
SMR:Q94899 DIP:DIP-19507N IntAct:Q94899 MINT:MINT-775221
STRING:Q94899 PaxDb:Q94899 PRIDE:Q94899 EnsemblMetazoa:FBtr0079780
EnsemblMetazoa:FBtr0079781 EnsemblMetazoa:FBtr0331452 GeneID:34225
KEGG:dme:Dmel_CG9556 CTD:34225 FlyBase:FBgn0013746
InParanoid:Q94899 OrthoDB:EOG4QNKBG PhylomeDB:Q94899
GenomeRNAi:34225 NextBio:787477 Bgee:Q94899 GermOnline:CG9556
GO:GO:0008231 Uniprot:Q94899
Length = 444
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 210/358 (58%), Positives = 272/358 (75%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
MM Y+++LTYIKSAVTRN+SEK IN+I+D++S S+N +LL+ FY+TTL AL +AKN+
Sbjct: 89 MMVRYKQLLTYIKSAVTRNHSEKSINSILDYIS--TSKNMALLQNFYETTLDALRDAKND 146
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++FD ++ ++ KILK+LH+SCQ +DG DD KKG+QLLE+YA+EIQMY
Sbjct: 147 RLWFKTNTKLGKLYFDRSDFTKLQKILKQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMY 206
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
T SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNY
Sbjct: 207 TVQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY 266
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DE+G+ RR CLKYLVLANMLM+S +NPFD QEAKPYKNDPEILAMTNL+ +YQ N+I E
Sbjct: 267 DESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FE IL+ +R IM D FIR +IEDLL+N+RTQVL+KLI+PY I IPFI+ LN+ +V
Sbjct: 327 FETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIPFIANALNIEPAEV 386
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQTVSNRVS 358
E LLVS ILD+ I G IDQVN++L+ + +Y A++KW++Q++SL V +++
Sbjct: 387 ESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKWSNQIQSLQFAVVQKMA 444
>UNIPROTKB|F1SQG5 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR011990 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
InterPro:IPR019280 Pfam:PF10075 EMBL:CU041367 EMBL:CU407149
Ensembl:ENSSSCT00000005137 ArrayExpress:F1SQG5 Uniprot:F1SQG5
Length = 385
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 197/308 (63%), Positives = 248/308 (80%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
MM+ Y+++LTYI+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+
Sbjct: 80 MMNRYKQLLTYIRSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKND 137
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMY
Sbjct: 138 RLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMY 197
Query: 121 TETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 180
T SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNY
Sbjct: 198 TAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY 257
Query: 181 DEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIE 240
DE+G+ RR CLKYLVLANMLM+S +NPFD QEAKPYKNDPEILAMTNL++AYQ N+I E
Sbjct: 258 DESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITE 317
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKILK+N IMDDPFIR +IE+LL+N+RTQVL+KLIKPYTRI IPFISK+LN+ D+
Sbjct: 318 FEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKKLNLSFSDL 377
Query: 301 EQLLVSLI 308
+ +L+ I
Sbjct: 378 QYVLILCI 385
>WB|WBGene00000814 [details] [associations]
symbol:csn-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0009792 GO:GO:0005737 GO:GO:0018991 GO:GO:0040010
GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV EMBL:FO080100 PIR:T25440 RefSeq:NP_491740.1
ProteinModelPortal:O01422 SMR:O01422 DIP:DIP-24665N IntAct:O01422
MINT:MINT-1040695 STRING:O01422 PaxDb:O01422 PRIDE:O01422
EnsemblMetazoa:B0025.2.1 EnsemblMetazoa:B0025.2.2
EnsemblMetazoa:B0025.2.3 GeneID:172278 KEGG:cel:CELE_B0025.2
UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 183/336 (54%), Positives = 254/336 (75%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
M++ YR++LTYIKSAVT+NYSEK IN I+D++S S+ LL+ FY+TTL AL++AKNE
Sbjct: 85 MLEYYRQLLTYIKSAVTKNYSEKSINAILDYIS--TSRQMDLLQHFYETTLDALKDAKNE 142
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++FD+ E+ ++ KI+K+L SC+ E G +DQ+KG+QLLE+YA+EIQMY
Sbjct: 143 RLWFKTNTKLGKLFFDLHEFTKLEKIVKQLKVSCKNEQGEEDQRKGTQLLEIYALEIQMY 202
Query: 121 TETXXXXXXX---XXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAF 177
TE SAIPHP I+G IRECGGKMH+ + ++ DA TDFFEAF
Sbjct: 203 TEQKNNKALKWVYELATQAIHTKSAIPHPLILGTIRECGGKMHLRDGRFLDAHTDFFEAF 262
Query: 178 KNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNE 237
KNYDE+G+ RR CLKYLVLANML++S++NPFD QEAKP+KN+PEI+AMT ++ AYQ N+
Sbjct: 263 KNYDESGSPRRTTCLKYLVLANMLIKSDINPFDSQEAKPFKNEPEIVAMTQMVQAYQDND 322
Query: 238 IIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPE 297
I FE+I+ +++ +IM DPFIR + E+L+ N+RTQVLL+LI+PYT +RI ++S++L V +
Sbjct: 323 IQAFEQIMAAHQDSIMADPFIREHTEELMNNIRTQVLLRLIRPYTNVRISYLSQKLKVSQ 382
Query: 298 KDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGM 333
K+V LLV ILD+ ++ I++ + ++E K M
Sbjct: 383 KEVIHLLVDAILDDGLEAKINEESGMIEMPKNKKKM 418
>UNIPROTKB|O01422 [details] [associations]
symbol:csn-2 "COP9 signalosome complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV EMBL:FO080100 PIR:T25440
RefSeq:NP_491740.1 ProteinModelPortal:O01422 SMR:O01422
DIP:DIP-24665N IntAct:O01422 MINT:MINT-1040695 STRING:O01422
PaxDb:O01422 PRIDE:O01422 EnsemblMetazoa:B0025.2.1
EnsemblMetazoa:B0025.2.2 EnsemblMetazoa:B0025.2.3 GeneID:172278
KEGG:cel:CELE_B0025.2 UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 183/336 (54%), Positives = 254/336 (75%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 60
M++ YR++LTYIKSAVT+NYSEK IN I+D++S S+ LL+ FY+TTL AL++AKNE
Sbjct: 85 MLEYYRQLLTYIKSAVTKNYSEKSINAILDYIS--TSRQMDLLQHFYETTLDALKDAKNE 142
Query: 61 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
RLWFKTN KL K++FD+ E+ ++ KI+K+L SC+ E G +DQ+KG+QLLE+YA+EIQMY
Sbjct: 143 RLWFKTNTKLGKLFFDLHEFTKLEKIVKQLKVSCKNEQGEEDQRKGTQLLEIYALEIQMY 202
Query: 121 TETXXXXXXX---XXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAF 177
TE SAIPHP I+G IRECGGKMH+ + ++ DA TDFFEAF
Sbjct: 203 TEQKNNKALKWVYELATQAIHTKSAIPHPLILGTIRECGGKMHLRDGRFLDAHTDFFEAF 262
Query: 178 KNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNE 237
KNYDE+G+ RR CLKYLVLANML++S++NPFD QEAKP+KN+PEI+AMT ++ AYQ N+
Sbjct: 263 KNYDESGSPRRTTCLKYLVLANMLIKSDINPFDSQEAKPFKNEPEIVAMTQMVQAYQDND 322
Query: 238 IIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPE 297
I FE+I+ +++ +IM DPFIR + E+L+ N+RTQVLL+LI+PYT +RI ++S++L V +
Sbjct: 323 IQAFEQIMAAHQDSIMADPFIREHTEELMNNIRTQVLLRLIRPYTNVRISYLSQKLKVSQ 382
Query: 298 KDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGM 333
K+V LLV ILD+ ++ I++ + ++E K M
Sbjct: 383 KEVIHLLVDAILDDGLEAKINEESGMIEMPKNKKKM 418
>ASPGD|ASPL0000076227 [details] [associations]
symbol:csnB species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
EMBL:BN001303 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
EMBL:AACD01000081 RefSeq:XP_662387.1 STRING:Q5B3U7
EnsemblFungi:CADANIAT00005639 GeneID:2872575 KEGG:ani:AN4783.2
OrthoDB:EOG4PZNGN Uniprot:Q5B3U7
Length = 506
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 172/352 (48%), Positives = 250/352 (71%)
Query: 2 MDAYREMLTYIKSAVTRNYSEKCINNIMDFVS-GSASQN-FSLLREFYQTTLKALEEAKN 59
++ YRE+LTY+KSAVTRNYSEK INN++D++ GS + + + EFY TL + + N
Sbjct: 90 VEHYRELLTYVKSAVTRNYSEKSINNMLDYIEKGSDDEKAYQCMEEFYSLTLNSFQNTNN 149
Query: 60 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 119
ERLW KTN+KL ++W + EYG++SK ++ELH++CQREDG+DD KG+ LLE+YA+EIQM
Sbjct: 150 ERLWLKTNIKLARLWLERREYGQLSKKVRELHRACQREDGSDDPSKGTYLLELYALEIQM 209
Query: 120 YTETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 179
Y ET SA+PHP+IMGIIRECGGKMHM+E W +A +DFFE+F+N
Sbjct: 210 YAETKNNKRLKALYQRALRVRSAVPHPKIMGIIRECGGKMHMSEENWEEAQSDFFESFRN 269
Query: 180 YDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEII 239
YDEAG+ +RIQ LKYLVL MLM+S++NPF QE KPYK DP I AMT+L+ A+QR++I
Sbjct: 270 YDEAGSMQRIQVLKYLVLTTMLMKSDINPFHSQETKPYKTDPRISAMTDLVDAFQRDDIH 329
Query: 240 EFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKD 299
+E++L N ++ DPFI I+++ +N+RT+ +LKLI PYTR + FISK + + +
Sbjct: 330 AYEEVLSKN-PDVLADPFIAENIDEVSRNMRTKAILKLIAPYTRFTLSFISKHIKISVTE 388
Query: 300 VEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNSQLRSLYQ 351
+ +L LILD +++ IDQ + + + + +++ ++++WN LR+L+Q
Sbjct: 389 AQDILSFLILDKKLNAKIDQESGTVVV-ESASDVERLRSVEEWNESLRTLWQ 439
>UNIPROTKB|G5EHS2 [details] [associations]
symbol:MGCH7_ch7g1103 "COP9 signalosome complex subunit 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 EMBL:CM000230 EMBL:CM001237 InterPro:IPR013143
SMART:SM00753 KO:K12176 RefSeq:XP_003720496.1
ProteinModelPortal:G5EHS2 EnsemblFungi:MGG_10325T0 GeneID:2681900
KEGG:mgr:MGG_10325 Uniprot:G5EHS2
Length = 522
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 172/341 (50%), Positives = 237/341 (69%)
Query: 2 MDAYREMLTYIKSAVTRNYSEKCINNIMDFV---SGSASQNFSLLREFYQTTLKALEEAK 58
++ Y+E+LTY+KSAVTRNYSEK INN++D + +G + + + EFY TL +
Sbjct: 90 IEHYKELLTYVKSAVTRNYSEKSINNMLDHIEKGAGGSPEAGKCMEEFYSLTLACFQNTN 149
Query: 59 NERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQ 118
NERLW KTN+KLCK+ D EYG +++ L+ELHKSC+REDGTDD KG+ LLE+YA+EIQ
Sbjct: 150 NERLWLKTNIKLCKLLLDRKEYGTVTRKLRELHKSCEREDGTDDPSKGTYLLEIYALEIQ 209
Query: 119 MYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 178
MY ET SA+PHP+IMGIIRECGGKMHMAE W DA +DFFE+F+
Sbjct: 210 MYAETRNNKQLKRLYQRALKVRSAVPHPKIMGIIRECGGKMHMAEENWKDAQSDFFESFR 269
Query: 179 NYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEI 238
NYDEAG+ +RIQ LKYL+L MLM S++NPFD QE KPY+NDP I AM +L+ AYQR++I
Sbjct: 270 NYDEAGSLQRIQVLKYLLLTTMLMRSDINPFDSQETKPYRNDPRIAAMKDLVDAYQRDDI 329
Query: 239 IEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEK 298
++E +LK N ++ DPFI I+++ + +RT+ + +LI PY R+R+ +I+ +L + E
Sbjct: 330 HQYEAVLKKNTD-LLADPFIAENIDEVTRTMRTKAVQRLIAPYERVRVDWIAAQLRITEA 388
Query: 299 DVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAI 339
+ +L LI+D ++ G IDQ L+E R+ M + AI
Sbjct: 389 EARDILGFLIIDGKVAGKIDQSRGLVEIESRAD-MDRIVAI 428
>POMBASE|SPAPB17E12.04c [details] [associations]
symbol:csn2 "COP9/signalosome complex subunit Csn2"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
PomBase:SPAPB17E12.04c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006974 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV OrthoDB:EOG4PZNGN EMBL:AF314168 RefSeq:NP_001018220.1
ProteinModelPortal:Q9HFR0 IntAct:Q9HFR0 STRING:Q9HFR0
EnsemblFungi:SPAPB17E12.04c.1 GeneID:3361420
KEGG:spo:SPAPB17E12.04c NextBio:20811469 Uniprot:Q9HFR0
Length = 437
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 147/325 (45%), Positives = 219/325 (67%)
Query: 1 MMDAYREMLTYIK-SAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKN 59
M+ +Y+ +L Y ++T+NYSEK I NI+++ S + +N L +FY T KAL+ N
Sbjct: 88 MLQSYQRLLGYTNWLSITKNYSEKSIYNIVEYAS--SCENTEFLEKFYDVTTKALQNLNN 145
Query: 60 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGT-DDQKKGSQLLEVYAIEIQ 118
ERL K + + + Y + +L+++H+ E+ + DQ +G+ LLE+Y++EIQ
Sbjct: 146 ERLMLKVLMHVARFLLTQKNYHKFKYLLRQMHELLSDENNSVADQNRGTHLLELYSLEIQ 205
Query: 119 MYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 178
MY++ +AIPHPRIMGIIRECGGKMHM E QW++A T+FFE+FK
Sbjct: 206 MYSDIEDNKRLKELYQSSLRVKTAIPHPRIMGIIRECGGKMHMQENQWSEAQTNFFESFK 265
Query: 179 NYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEI 238
+YDEAG+ RI+ LKYLVLANML ESE+NPFD E +PYK++P I+AMT L+ AYQ +I
Sbjct: 266 SYDEAGSSDRIRVLKYLVLANMLSESEINPFDSPETQPYKDNPHIIAMTKLVEAYQIRDI 325
Query: 239 IEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEK 298
E+IL++ + I+DD FIR Y++ +L ++R+QVL++L+KPYT +++ ++K+L V
Sbjct: 326 TAVERILQTYQHDILDDDFIRQYVDKILYSIRSQVLIELVKPYTSVKLSLLAKKLGVSIS 385
Query: 299 DVEQLLVSLILDNRIDGHIDQVNRL 323
+EQ LV LI+D R++G ID VN +
Sbjct: 386 IIEQALVGLIIDERVNGKIDMVNEV 410
>CGD|CAL0004448 [details] [associations]
symbol:orf19.1400 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0004448 EMBL:AACQ01000101 EMBL:AACQ01000099 KO:K12176
RefSeq:XP_714571.1 RefSeq:XP_714665.1 GeneID:3643683 GeneID:3643813
KEGG:cal:CaO19.1400 KEGG:cal:CaO19.8978 eggNOG:NOG266353
Uniprot:Q59YC7
Length = 747
Score = 307 (113.1 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 89/323 (27%), Positives = 158/323 (48%)
Query: 18 RNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE--RLWFKTNLKLCKIWF 75
++Y E+ + +++ S SA N + + +FY T L L+ N RLWFK N+ L +
Sbjct: 146 KSYIEESFSKMINRYSISA--NVTFVTQFYNTLLNYLDSNSNSSCRLWFKININLLNLHL 203
Query: 76 DMGEYGRMSKILKELHKSCQ-----REDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXX 130
D Y + +L++++ +G + S L+ AIEI T+
Sbjct: 204 DHQIYDDIPNLLQKVYSKLDIISNGGNNGCSETMLNSFKLQTIAIEIDYLTKINQFNLNL 263
Query: 131 XXXXXXXXXXSAIP----HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQ 186
S I HPRI II +C G + + A +F+++F+NYDEAG+
Sbjct: 264 PRMNQLYRMSSKITTVVTHPRICAIINQCRGLIQFYRGNYHRANIEFYKSFQNYDEAGST 323
Query: 187 RRIQCLKYLVLANMLMESEVNPFDGQEAKPY-KNDPEILAMTNLIAAYQRNEIIEFEKI- 244
+ + LKY L ++L+ESE++PF QE + K+ + + LI Y ++ +FE +
Sbjct: 324 MKYKLLKYYALCSLLIESELDPFQSQETQIISKSSNQFNKLKLLIKYYNDLDLEKFENLV 383
Query: 245 ---LKSNRKTI-----MDDPFIRN---Y---IEDLLKNVRTQVLLKLIKPYTRIRIPFIS 290
L+S + +D+ I N Y IE++L N++++VLL IK Y+ I+ F+
Sbjct: 384 FSSLESGLSLLSSSQDIDEESIENDDIYKVAIEEILYNLKSKVLLNYIKAYSAIKFEFLY 443
Query: 291 KELNVPEKDVEQLLVSLILDNRI 313
++L + E + +L+ L + ++
Sbjct: 444 RKLRIDENQLRSILLQLSMAGKL 466
>UNIPROTKB|Q59YC7 [details] [associations]
symbol:CSN2 "Potential COP9 signalosome subunit CSN2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0004448 EMBL:AACQ01000101 EMBL:AACQ01000099 KO:K12176
RefSeq:XP_714571.1 RefSeq:XP_714665.1 GeneID:3643683 GeneID:3643813
KEGG:cal:CaO19.1400 KEGG:cal:CaO19.8978 eggNOG:NOG266353
Uniprot:Q59YC7
Length = 747
Score = 307 (113.1 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 89/323 (27%), Positives = 158/323 (48%)
Query: 18 RNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE--RLWFKTNLKLCKIWF 75
++Y E+ + +++ S SA N + + +FY T L L+ N RLWFK N+ L +
Sbjct: 146 KSYIEESFSKMINRYSISA--NVTFVTQFYNTLLNYLDSNSNSSCRLWFKININLLNLHL 203
Query: 76 DMGEYGRMSKILKELHKSCQ-----REDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXX 130
D Y + +L++++ +G + S L+ AIEI T+
Sbjct: 204 DHQIYDDIPNLLQKVYSKLDIISNGGNNGCSETMLNSFKLQTIAIEIDYLTKINQFNLNL 263
Query: 131 XXXXXXXXXXSAIP----HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQ 186
S I HPRI II +C G + + A +F+++F+NYDEAG+
Sbjct: 264 PRMNQLYRMSSKITTVVTHPRICAIINQCRGLIQFYRGNYHRANIEFYKSFQNYDEAGST 323
Query: 187 RRIQCLKYLVLANMLMESEVNPFDGQEAKPY-KNDPEILAMTNLIAAYQRNEIIEFEKI- 244
+ + LKY L ++L+ESE++PF QE + K+ + + LI Y ++ +FE +
Sbjct: 324 MKYKLLKYYALCSLLIESELDPFQSQETQIISKSSNQFNKLKLLIKYYNDLDLEKFENLV 383
Query: 245 ---LKSNRKTI-----MDDPFIRN---Y---IEDLLKNVRTQVLLKLIKPYTRIRIPFIS 290
L+S + +D+ I N Y IE++L N++++VLL IK Y+ I+ F+
Sbjct: 384 FSSLESGLSLLSSSQDIDEESIENDDIYKVAIEEILYNLKSKVLLNYIKAYSAIKFEFLY 443
Query: 291 KELNVPEKDVEQLLVSLILDNRI 313
++L + E + +L+ L + ++
Sbjct: 444 RKLRIDENQLRSILLQLSMAGKL 466
>UNIPROTKB|F1RKW8 [details] [associations]
symbol:PSMD11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
InterPro:IPR013143 SMART:SM00753 GeneTree:ENSGT00530000063301
OMA:SGILDQG EMBL:CU463935 EMBL:CU695029 Ensembl:ENSSSCT00000019298
Uniprot:F1RKW8
Length = 392
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 92/364 (25%), Positives = 172/364 (47%)
Query: 8 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 63
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK+E+
Sbjct: 39 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRT 93
Query: 64 F---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 116
F +L ++FD Y S++L+EL K DD+ + L+EV +E
Sbjct: 94 FLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLE 143
Query: 117 IQMYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDF 173
+ Y +AI P P++ + G +H AE + W A + F
Sbjct: 144 SKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYF 202
Query: 174 FEAFKNYDEAGNQRRIQCLKYLVLANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLI 230
+EAF+ YD + + I LKY++L +++ + +V G+ A Y + A+ +
Sbjct: 203 YEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGR-QTEALKCVA 261
Query: 231 AAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFIS 290
A + + +FEK L R + DDP I ++ L N+ Q L+++I+P++R++I IS
Sbjct: 262 QASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHIS 321
Query: 291 KELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTA----IDKWNSQL 346
+ + + DVE+ L +ILD + G +DQ +L D K Y A I + +
Sbjct: 322 SLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVV 381
Query: 347 RSLY 350
SLY
Sbjct: 382 DSLY 385
>ZFIN|ZDB-GENE-030131-2711 [details] [associations]
symbol:psmd11a "proteasome (prosome, macropain)
216S subunit, non-ATPase, 11a" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0022624
"proteasome accessory complex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048863 "stem cell differentiation" evidence=ISS] [GO:0043248
"proteasome assembly" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 ZFIN:ZDB-GENE-030131-2711 GO:GO:0005829 GO:GO:0005634
GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GeneTree:ENSGT00530000063301 GO:GO:0022624 KO:K03036
EMBL:BC124767 EMBL:BX890565 IPI:IPI00613161 RefSeq:NP_001159710.1
UniGene:Dr.76962 PRIDE:F6P3G4 Ensembl:ENSDART00000084448
GeneID:503934 KEGG:dre:503934 CTD:503934 NextBio:20866384
ArrayExpress:F6P3G4 Bgee:F6P3G4 Uniprot:F6P3G4
Length = 421
Score = 266 (98.7 bits), Expect = 8.6e-23, P = 8.6e-23
Identities = 88/360 (24%), Positives = 172/360 (47%)
Query: 8 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 63
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK+E+
Sbjct: 68 LLKYVRPFLNSISKAKAARLVRSLLDMFLDMEAATGQEV-----ELCLECIEWAKSEKRT 122
Query: 64 F---KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
F +L ++FD Y ++ +L + ++ DD+ + L+E+ +E + Y
Sbjct: 123 FLRQALEARLVSLYFDTKRYQEALQLGSQLLQELKK---MDDK---ALLVELQLLESKTY 176
Query: 121 TETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEAF 177
+AI P P++ + G +H AE + W A + F+EAF
Sbjct: 177 HALSNLPKARAALTSARTTANAIYCP-PKLQAALDMQSGIIHAAEEKDWKTAYSYFYEAF 235
Query: 178 KNYDEAGNQRRIQCLKYLVLANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLIAAYQ 234
+ YD + R I LKY++L +++ S +V G+ A Y + A+ + A +
Sbjct: 236 EGYDSIDSPRAITALKYMLLCKIMLNSPEDVQSLISGKLALRYAGR-QTEALKCVAQASK 294
Query: 235 RNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELN 294
+ +FEK L + + DDP I ++ L N+ Q L+++I+P++R++I IS+ +
Sbjct: 295 NRSLADFEKALTEYKAELRDDPIISTHLTKLYDNLLEQNLIRVIEPFSRVQIEHISELIK 354
Query: 295 VPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTA----IDKWNSQLRSLY 350
+ + DVE+ L +ILD + G +DQ +L D K Y A I + + SLY
Sbjct: 355 LSKGDVERKLSQMILDQKFHGILDQGEGVLIVFDEPPVDKTYEASLETIQNMSKVVDSLY 414
>UNIPROTKB|Q2KI42 [details] [associations]
symbol:PSMD11 "26S proteasome non-ATPase regulatory subunit
11" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0043248 "proteasome assembly" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 GO:GO:0005634
GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 GeneTree:ENSGT00530000063301
GO:GO:0022624 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG
EMBL:BT029888 EMBL:DAAA02048509 EMBL:DAAA02048510 EMBL:BC112777
IPI:IPI00716714 RefSeq:NP_001039613.1 UniGene:Bt.2394
ProteinModelPortal:Q2KI42 SMR:Q2KI42 STRING:Q2KI42 PRIDE:Q2KI42
Ensembl:ENSBTAT00000025152 Ensembl:ENSBTAT00000054679 GeneID:513461
KEGG:bta:513461 CTD:5717 HOVERGEN:HBG053738 InParanoid:Q2KI42
OrthoDB:EOG41RPV3 NextBio:20870863 ArrayExpress:Q2KI42
Uniprot:Q2KI42
Length = 422
Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 92/364 (25%), Positives = 172/364 (47%)
Query: 8 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 63
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK+E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRT 123
Query: 64 F---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 116
F +L ++FD Y S++L+EL K DD+ + L+EV +E
Sbjct: 124 FLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLE 173
Query: 117 IQMYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDF 173
+ Y +AI P P++ + G +H AE + W A + F
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYF 232
Query: 174 FEAFKNYDEAGNQRRIQCLKYLVLANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLI 230
+EAF+ YD + + I LKY++L +++ + +V G+ A Y + A+ +
Sbjct: 233 YEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGR-QTEALKCVA 291
Query: 231 AAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFIS 290
A + + +FEK L R + DDP I ++ L N+ Q L+++I+P++R++I IS
Sbjct: 292 QASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHIS 351
Query: 291 KELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTA----IDKWNSQL 346
+ + + DVE+ L +ILD + G +DQ +L D K Y A I + +
Sbjct: 352 SLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVV 411
Query: 347 RSLY 350
SLY
Sbjct: 412 DSLY 415
>UNIPROTKB|E2RJ26 [details] [associations]
symbol:PSMD11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0043248 "proteasome assembly" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00530000063301 KO:K03036 OMA:SGILDQG CTD:5717
EMBL:AAEX03006642 RefSeq:XP_537730.2 ProteinModelPortal:E2RJ26
Ensembl:ENSCAFT00000029207 GeneID:480610 KEGG:cfa:480610
Uniprot:E2RJ26
Length = 422
Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 92/364 (25%), Positives = 172/364 (47%)
Query: 8 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 63
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK+E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRT 123
Query: 64 F---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 116
F +L ++FD Y S++L+EL K DD+ + L+EV +E
Sbjct: 124 FLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLE 173
Query: 117 IQMYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDF 173
+ Y +AI P P++ + G +H AE + W A + F
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYF 232
Query: 174 FEAFKNYDEAGNQRRIQCLKYLVLANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLI 230
+EAF+ YD + + I LKY++L +++ + +V G+ A Y + A+ +
Sbjct: 233 YEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGR-QTEALKCVA 291
Query: 231 AAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFIS 290
A + + +FEK L R + DDP I ++ L N+ Q L+++I+P++R++I IS
Sbjct: 292 QASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHIS 351
Query: 291 KELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTA----IDKWNSQL 346
+ + + DVE+ L +ILD + G +DQ +L D K Y A I + +
Sbjct: 352 SLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVV 411
Query: 347 RSLY 350
SLY
Sbjct: 412 DSLY 415
>UNIPROTKB|O00231 [details] [associations]
symbol:PSMD11 "26S proteasome non-ATPase regulatory subunit
11" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0043248 "proteasome assembly" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0044281 GO:GO:0000082 GO:GO:0048863
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0051436 GO:GO:0043248 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 EMBL:CH471147
GO:GO:0006521 Reactome:REACT_383 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 GO:GO:0022624 KO:K03036 OMA:SGILDQG CTD:5717
HOVERGEN:HBG053738 OrthoDB:EOG41RPV3 EMBL:AF001212 EMBL:AB003102
EMBL:AK290602 EMBL:AK223196 EMBL:BC000437 EMBL:BC004430
IPI:IPI00105598 PIR:JC6524 RefSeq:NP_001257411.1 RefSeq:NP_002806.2
UniGene:Hs.443379 ProteinModelPortal:O00231 SMR:O00231
IntAct:O00231 MINT:MINT-1154929 STRING:O00231 PhosphoSite:O00231
OGP:O00231 PaxDb:O00231 PRIDE:O00231 Ensembl:ENST00000261712
Ensembl:ENST00000457654 GeneID:5717 KEGG:hsa:5717 UCSC:uc002hhm.3
GeneCards:GC17P030771 HGNC:HGNC:9556 HPA:HPA042275 MIM:604449
neXtProt:NX_O00231 PharmGKB:PA33902 InParanoid:O00231
PhylomeDB:O00231 GenomeRNAi:5717 NextBio:22212 ArrayExpress:O00231
Bgee:O00231 CleanEx:HS_PSMD11 Genevestigator:O00231
GermOnline:ENSG00000108671 Uniprot:O00231
Length = 422
Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 92/364 (25%), Positives = 172/364 (47%)
Query: 8 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 63
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK+E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRT 123
Query: 64 F---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 116
F +L ++FD Y S++L+EL K DD+ + L+EV +E
Sbjct: 124 FLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLE 173
Query: 117 IQMYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDF 173
+ Y +AI P P++ + G +H AE + W A + F
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYF 232
Query: 174 FEAFKNYDEAGNQRRIQCLKYLVLANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLI 230
+EAF+ YD + + I LKY++L +++ + +V G+ A Y + A+ +
Sbjct: 233 YEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGR-QTEALKCVA 291
Query: 231 AAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFIS 290
A + + +FEK L R + DDP I ++ L N+ Q L+++I+P++R++I IS
Sbjct: 292 QASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHIS 351
Query: 291 KELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTA----IDKWNSQL 346
+ + + DVE+ L +ILD + G +DQ +L D K Y A I + +
Sbjct: 352 SLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVV 411
Query: 347 RSLY 350
SLY
Sbjct: 412 DSLY 415
>MGI|MGI:1916327 [details] [associations]
symbol:Psmd11 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 11" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0022624 "proteasome accessory complex"
evidence=ISO;IDA] [GO:0043248 "proteasome assembly" evidence=ISO]
[GO:0048863 "stem cell differentiation" evidence=ISO]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
MGI:MGI:1916327 GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 GeneTree:ENSGT00530000063301
GO:GO:0022624 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG CTD:5717
HOVERGEN:HBG053738 OrthoDB:EOG41RPV3 EMBL:AK051738 EMBL:AK089942
IPI:IPI00222515 RefSeq:NP_848731.2 UniGene:Mm.260539
ProteinModelPortal:Q8BG32 SMR:Q8BG32 IntAct:Q8BG32 STRING:Q8BG32
PhosphoSite:Q8BG32 PaxDb:Q8BG32 PRIDE:Q8BG32
Ensembl:ENSMUST00000017572 Ensembl:ENSMUST00000173938 GeneID:69077
KEGG:mmu:69077 InParanoid:Q8BG32 NextBio:328550 Bgee:Q8BG32
Genevestigator:Q8BG32 GermOnline:ENSMUSG00000017428 Uniprot:Q8BG32
Length = 422
Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 92/364 (25%), Positives = 172/364 (47%)
Query: 8 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 63
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK+E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRT 123
Query: 64 F---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 116
F +L ++FD Y S++L+EL K DD+ + L+EV +E
Sbjct: 124 FLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLE 173
Query: 117 IQMYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDF 173
+ Y +AI P P++ + G +H AE + W A + F
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYF 232
Query: 174 FEAFKNYDEAGNQRRIQCLKYLVLANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLI 230
+EAF+ YD + + I LKY++L +++ + +V G+ A Y + A+ +
Sbjct: 233 YEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGR-QTEALKCVA 291
Query: 231 AAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFIS 290
A + + +FEK L R + DDP I ++ L N+ Q L+++I+P++R++I IS
Sbjct: 292 QASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHIS 351
Query: 291 KELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTA----IDKWNSQL 346
+ + + DVE+ L +ILD + G +DQ +L D K Y A I + +
Sbjct: 352 SLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVV 411
Query: 347 RSLY 350
SLY
Sbjct: 412 DSLY 415
>RGD|1306450 [details] [associations]
symbol:Psmd11 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 11" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISO;ISS] [GO:0043248 "proteasome assembly"
evidence=ISO;ISS] [GO:0048863 "stem cell differentiation"
evidence=ISO;ISS] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 RGD:1306450 GO:GO:0005829 GO:GO:0005634
GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 OMA:SGILDQG IPI:IPI00765842
ProteinModelPortal:F1LMZ8 PRIDE:F1LMZ8 ArrayExpress:F1LMZ8
Uniprot:F1LMZ8
Length = 422
Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 92/364 (25%), Positives = 172/364 (47%)
Query: 8 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 63
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK+E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRT 123
Query: 64 F---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 116
F +L ++FD Y S++L+EL K DD+ + L+EV +E
Sbjct: 124 FLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLE 173
Query: 117 IQMYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDF 173
+ Y +AI P P++ + G +H AE + W A + F
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYF 232
Query: 174 FEAFKNYDEAGNQRRIQCLKYLVLANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLI 230
+EAF+ YD + + I LKY++L +++ + +V G+ A Y + A+ +
Sbjct: 233 YEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGR-QTEALKCVA 291
Query: 231 AAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFIS 290
A + + +FEK L R + DDP I ++ L N+ Q L+++I+P++R++I IS
Sbjct: 292 QASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHIS 351
Query: 291 KELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTA----IDKWNSQL 346
+ + + DVE+ L +ILD + G +DQ +L D K Y A I + +
Sbjct: 352 SLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVV 411
Query: 347 RSLY 350
SLY
Sbjct: 412 DSLY 415
>ZFIN|ZDB-GENE-030131-984 [details] [associations]
symbol:psmd11b "proteasome (prosome, macropain)
216S subunit, non-ATPase, 11b" species:7955 "Danio rerio"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0043248 "proteasome assembly" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0048863 "stem cell differentiation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 ZFIN:ZDB-GENE-030131-984 GO:GO:0005829
GO:GO:0005634 GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GeneTree:ENSGT00530000063301 GO:GO:0022624 KO:K03036
EMBL:CR391936 EMBL:BC051618 EMBL:BC063978 IPI:IPI00507762
RefSeq:NP_955886.1 UniGene:Dr.30259 Ensembl:ENSDART00000016283
GeneID:322265 KEGG:dre:322265 CTD:322265 NextBio:20807740
ArrayExpress:F1QGH9 Bgee:F1QGH9 Uniprot:F1QGH9
Length = 422
Score = 257 (95.5 bits), Expect = 9.4e-22, P = 9.4e-22
Identities = 74/278 (26%), Positives = 133/278 (47%)
Query: 51 LKALEEAKNERLWF---KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGS 107
L+ +E AK E+ F +L ++FD Y ++ +L + ++ DD+ +
Sbjct: 111 LECIEWAKAEKRTFLRQALEARLISLYFDTKRYQEALQLESQLLQELKK---MDDK---A 164
Query: 108 QLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-R 164
L+EV +E + Y +AI P P++ + G +H AE +
Sbjct: 165 LLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCP-PKLQAALDMQSGIIHAAEEK 223
Query: 165 QWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLME--SEVNPF-DGQEAKPYKNDP 221
W A + FFEAF+ YD + R + LKY++L +++ EV G+ Y
Sbjct: 224 DWKTAYSYFFEAFEGYDSIDSPRAVTALKYMLLCKIMLSLPEEVQALISGKLGLRYAGR- 282
Query: 222 EILAMTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPY 281
+ A+ + A + + +FEK L K + DDP I ++ L N+ Q L+++I+P+
Sbjct: 283 QTDALKCIAQASKNRSLADFEKALTEYTKELRDDPIINTHLAKLYDNLLEQNLIRVIEPF 342
Query: 282 TRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQ 319
+R++I I+ + + + DVE+ L +ILD + G +DQ
Sbjct: 343 SRVQITHIAGLIKLSKNDVERKLSQMILDKKFHGILDQ 380
>DICTYBASE|DDB_G0281315 [details] [associations]
symbol:psmD11 "26S proteasome non-ATPase regulatory
subunit 11" species:44689 "Dictyostelium discoideum" [GO:0006972
"hyperosmotic response" evidence=IEP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0281315 GenomeReviews:CM000152_GR
EMBL:AAFI02000040 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006972 GO:GO:0004175 Gene3D:1.25.40.10 GO:GO:0006511
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159 GO:GO:0005838
KO:K03036 OMA:SGILDQG RefSeq:XP_640861.1 STRING:Q54UB5 PRIDE:Q54UB5
EnsemblProtists:DDB0232994 GeneID:8622917 KEGG:ddi:DDB_G0281315
ProtClustDB:CLSZ2729047 Uniprot:Q54UB5
Length = 413
Score = 256 (95.2 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 72/309 (23%), Positives = 147/309 (47%)
Query: 16 VTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWF 75
+++ ++K + N +D S + N + L EF + ++ ++ L + KL + F
Sbjct: 71 ISKPKTDKIVRNFIDIFS-TVPDNLTTLIEFVKENIQWCKDTNRIYLRQRLETKLFTLMF 129
Query: 76 DMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE--IQMYTETXXXXXXXXXX 133
+ +Y L L +R DD+ L+E+ +E IQ +
Sbjct: 130 EAKDYANALSGLTTLLTEIKR---LDDKPL---LVEIQLVESRIQHALKNIPKARAALTS 183
Query: 134 XXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLK 193
P P++ I G +H E+ + A + FFE+++ YD + ++ LK
Sbjct: 184 ARTNANTIYCP-PKLQAEIDMQSGILHSEEKDYKTAFSYFFESYETYDSLEDPFAMKALK 242
Query: 194 YLVLANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFEKILKSNRK 250
Y++L ++ +V+ +G+ Y N+ I A+T + ++ + + F+++ K
Sbjct: 243 YMLLCKIMTNQTDDVHALVNGKIGLKYHNNRSIEAITQISKSHAKRSLHMFQEVTKEFSD 302
Query: 251 TIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILD 310
+ DDP I +++ +L N+ Q L ++I+P++R+ I I+K +++P VE+ L +ILD
Sbjct: 303 QLSDDPIIHSHLTELYSNLLEQNLCRIIEPFSRVEISHIAKLIDLPVDVVERKLSLMILD 362
Query: 311 NRIDGHIDQ 319
+ +G +DQ
Sbjct: 363 KKYNGILDQ 371
>UNIPROTKB|F6XBL2 [details] [associations]
symbol:psmd11 "26S proteasome non-ATPase regulatory subunit
11" species:8364 "Xenopus (Silurana) tropicalis" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0043248 "proteasome assembly" evidence=ISS] [GO:0048863 "stem
cell differentiation" evidence=ISS] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005829
GO:GO:0005634 GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 KO:K03036 EMBL:AAMC01047365
RefSeq:XP_002935612.1 GeneID:100492225 KEGG:xtr:100492225
Xenbase:XB-GENE-922608 Bgee:F6XBL2 Uniprot:F6XBL2
Length = 422
Score = 254 (94.5 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 86/360 (23%), Positives = 169/360 (46%)
Query: 8 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 63
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKAEKRT 123
Query: 64 F---KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 120
F +L ++FD Y ++ +L + ++ DD+ + L+EV +E + Y
Sbjct: 124 FLRQALEARLVSLYFDTKRYQEALQLGSQLLRELKK---MDDK---ALLVEVQLLESKTY 177
Query: 121 TETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEAF 177
+AI P P++ + G +H AE + W A + F+EAF
Sbjct: 178 HALSNLPKARAALTSARTTANAIYCP-PKLQAALDMQSGIIHAAEEKDWKTAYSYFYEAF 236
Query: 178 KNYDEAGNQRRIQCLKYLVLANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLIAAYQ 234
+ D + + I LKY++L +++ + +V G+ A Y + A+ + A +
Sbjct: 237 EGNDSIDSPKAITALKYMLLCKIMLNTPEDVQALVSGKLALRYAGR-QTEALKCVAQASK 295
Query: 235 RNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELN 294
+ FEK L + + DDP I ++ L N+ Q L+++I+P++R++I IS +
Sbjct: 296 NRSLANFEKALTDYKAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIDHISSLIK 355
Query: 295 VPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTA----IDKWNSQLRSLY 350
+P+ +VE+ L +ILD + G +DQ +L D K Y A I + + SLY
Sbjct: 356 LPKPEVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLY 415
>FB|FBgn0028689 [details] [associations]
symbol:Rpn6 "Regulatory particle non-ATPase 6" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 EMBL:AE013599 GO:GO:0005875 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004175
Gene3D:1.25.40.10 GO:GO:0008541 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00530000063301 KO:K03036 OMA:SGILDQG EMBL:AF145309
EMBL:AF160939 EMBL:BT089015 RefSeq:NP_001246325.1
RefSeq:NP_477474.1 RefSeq:NP_725412.2 UniGene:Dm.3085 PDB:3TXM
PDB:3TXN PDBsum:3TXM PDBsum:3TXN ProteinModelPortal:Q7KLV9
SMR:Q7KLV9 IntAct:Q7KLV9 STRING:Q7KLV9 PRIDE:Q7KLV9
EnsemblMetazoa:FBtr0087475 EnsemblMetazoa:FBtr0306558 GeneID:36638
KEGG:dme:Dmel_CG10149 UCSC:CG10149-RB CTD:36638 FlyBase:FBgn0028689
InParanoid:Q7KLV9 GenomeRNAi:36638 NextBio:799626 Bgee:Q7KLV9
Uniprot:Q7KLV9
Length = 422
Score = 249 (92.7 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 75/316 (23%), Positives = 154/316 (48%)
Query: 14 SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNE-RLWFKTNL--K 69
S++++ + K + +++D F+ A + Q +E AK E R + + +L +
Sbjct: 78 SSISKAKAAKLVRSLVDMFLDMDAGTGIEV-----QLCKDCIEWAKQEKRTFLRQSLEAR 132
Query: 70 LCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXX 129
L ++FD Y + +L + ++ DD+ + L+EV +E + Y
Sbjct: 133 LIALYFDTALYTEALALGAQLLRELKK---LDDK---NLLVEVQLLESKTYHALSNLPKA 186
Query: 130 XXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMA-ERQWADAATDFFEAFKNYDEAGNQ 186
+AI P P++ G + G +H A ER + A + F+EAF+ +D +
Sbjct: 187 RAALTSARTTANAIYCP-PKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSV 245
Query: 187 RRIQCLKYLVLANMLM--ESEVNPF-DGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFEK 243
+ + LKY++L +++ +VN G+ A Y +I AM ++ A + + +F+
Sbjct: 246 KALTSLKYMLLCKIMLGQSDDVNQLVSGKLAITYSGR-DIDAMKSVAEASHKRSLADFQA 304
Query: 244 ILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQL 303
LK +K + +D ++ ++ L + Q L ++I+PY+R+++ +++ + +P VE+
Sbjct: 305 ALKEYKKELAEDVIVQAHLGTLYDTMLEQNLCRIIEPYSRVQVAHVAESIQLPMPQVEKK 364
Query: 304 LVSLILDNRIDGHIDQ 319
L +ILD + G +DQ
Sbjct: 365 LSQMILDKKFSGILDQ 380
>POMBASE|SPAC23G3.11 [details] [associations]
symbol:rpn6 "19S proteasome regulatory subunit Rpn6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISO] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 PomBase:SPAC23G3.11 GO:GO:0005829 GO:GO:0005634
GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0006511 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
GO:GO:0008540 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG PIR:T50185
RefSeq:NP_593111.1 ProteinModelPortal:Q9P7S2 IntAct:Q9P7S2
STRING:Q9P7S2 PRIDE:Q9P7S2 EnsemblFungi:SPAC23G3.11.1
GeneID:2541807 KEGG:spo:SPAC23G3.11 OrthoDB:EOG4K3Q51
NextBio:20802895 Uniprot:Q9P7S2
Length = 421
Score = 237 (88.5 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 79/325 (24%), Positives = 150/325 (46%)
Query: 21 SEKCINNIMDFVSGSASQNFSLLREFYQTTLK-ALEEAKNERLWFKTNLKLCKIWFDMGE 79
S K + ++D SG ++ L E +K A++E K L KL +++D
Sbjct: 83 SAKIVRTLIDKFSGE-KKSLPLQIEVANDCIKWAIKE-KRTFLRQALETKLISLYYDNSS 140
Query: 80 YGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXX 139
Y ++ L +R DD+ L EV+ +E ++Y
Sbjct: 141 YTDAINLINTLLSELKR---MDDKML---LTEVHLLESKVYHAIRNIPKARASLTAAKTS 194
Query: 140 XSAI--PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRR-IQCLKYLV 196
+A+ P P + G + G +H + + A + F+EA++ + + ++ + LKY++
Sbjct: 195 ANAVYCP-PMLQGNLDLQSGILHADDMDFKTAYSYFYEAYEGFTSLDDDKKALSSLKYML 253
Query: 197 LANMLMES--EVNPF-DGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFEKILKSNRKTIM 253
L+ +++ S EV G+ A Y +I AM + A++ + +FEK L+ + +
Sbjct: 254 LSQIMLNSVSEVKSLLTGKHAIRYAGR-DIEAMRAIAQAHENRSLADFEKALQDYKPELA 312
Query: 254 DDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRI 313
DP IR+++ L N+ Q LL++++P++R+ + I++ + + VE L +ILD
Sbjct: 313 SDPIIRSHLSSLYDNLLEQNLLRVVEPFSRVEVSHIAELIGLSTVQVEGKLSQMILDKIF 372
Query: 314 DGHIDQVNRLLERGDRSKGMKKYTA 338
G +DQ + L D + K Y A
Sbjct: 373 YGILDQGSGCLIVYDEPQQDKTYEA 397
>TAIR|locus:2030017 [details] [associations]
symbol:ATS9 "AT1G29150" species:3702 "Arabidopsis
thaliana" [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0030163
"protein catabolic process" evidence=TAS] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506
GO:GO:0005634 GO:GO:0046686 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030163 GO:GO:0000502 EMBL:AC021043 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000210093 KO:K03036
OMA:SGILDQG EMBL:AF083890 EMBL:AY230834 EMBL:AY230835 EMBL:AY230836
EMBL:AY230837 EMBL:AF370203 EMBL:AY056311 IPI:IPI00521338
PIR:A86414 PIR:T52033 RefSeq:NP_174210.1 UniGene:At.21249
ProteinModelPortal:Q9LP45 SMR:Q9LP45 IntAct:Q9LP45 STRING:Q9LP45
PRIDE:Q9LP45 EnsemblPlants:AT1G29150.1 GeneID:839789
KEGG:ath:AT1G29150 TAIR:At1g29150 InParanoid:Q9LP45
PhylomeDB:Q9LP45 ProtClustDB:CLSN2679678 Genevestigator:Q9LP45
Uniprot:Q9LP45
Length = 419
Score = 235 (87.8 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 76/323 (23%), Positives = 149/323 (46%)
Query: 6 REMLTYIK---SAVTRNYSEKCINNIMDFVS---GSASQNFSLLREFYQTTLKALEEAKN 59
R++LT ++ S + + + K + I+D V+ G+ +L +E + T +A K
Sbjct: 64 RKLLTKLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTTDLQITLCKEMVEWT-RA---EKR 119
Query: 60 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 119
L + +L + + EY +L L K +R DD+ L+++ +E ++
Sbjct: 120 TFLRQRVEARLAALLMENKEYVEALALLSTLVKEVRR---LDDKLL---LVDIDLLESKL 173
Query: 120 YTETXXXXXXXXXXXXXXXXXSAI-PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 178
+ +AI P G I G +H E+ + + FFEAF+
Sbjct: 174 HFSLRNLPKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFE 233
Query: 179 NYDEAGNQRRIQCLKYLVLANMLMES--EVNPFDGQEAKPYKNDPEILAMTNLIAAYQRN 236
+++ G+ R + LKY++L +++ +V +A P++ AM + A+ +
Sbjct: 234 SFNALGDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPDLDAMKAVADAHSKR 293
Query: 237 EIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVP 296
+ FE L+ + + DDP + ++ L + Q L +LI+P++R+ I I++ + +P
Sbjct: 294 SLKLFENALRDYKAQLEDDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELIGLP 353
Query: 297 EKDVEQLLVSLILDNRIDGHIDQ 319
VE+ L +ILD + G +DQ
Sbjct: 354 LDHVEKKLSQMILDKKFAGTLDQ 376
>CGD|CAL0003109 [details] [associations]
symbol:RPN6 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 CGD:CAL0003109 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 InterPro:IPR013143
SMART:SM00753 EMBL:AACQ01000138 KO:K03036 RefSeq:XP_709940.1
ProteinModelPortal:Q59TR9 STRING:Q59TR9 GeneID:3645352
KEGG:cal:CaO19.1299 Uniprot:Q59TR9
Length = 435
Score = 233 (87.1 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 82/318 (25%), Positives = 144/318 (45%)
Query: 28 IMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWF---KTNLKLCKIWFDMGEYGRMS 84
I DF SA SL + T +++ A +L F LKL + + +
Sbjct: 103 IEDFDKLSAKDEKSLDIQI-DVTKSSMQWAIESKLSFLRQSLQLKLSDLLYQKKHHHEAI 161
Query: 85 KILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIP 144
KI+ EL + ++ DD+ S L+EV +E ++Y ++I
Sbjct: 162 KIINELLREYKK---LDDK---SSLVEVQLLESKIYHALRNIPKAKAALTSARTSANSIY 215
Query: 145 HPRIMGIIREC-GGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLME 203
P I+ +C G ++ ++ + A + F+E+F+ ++ + R I LKY++L +++
Sbjct: 216 CPTILQAELDCQSGILNSEDKDYKTAFSYFYESFEGFNSQDDPRSIIVLKYMLLTKIMLN 275
Query: 204 --SEVNPF-DGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRN 260
+VN + + YK+ +I AM ++ AY + EFE L + + D I+N
Sbjct: 276 LIDDVNNILNNKNVIKYKSK-DIDAMKSIAMAYSNRSLKEFENSLLTYANELKSDAIIKN 334
Query: 261 YIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQV 320
+ L N+ Q LLK+I+ Y+ + + ISK + + + VE L +ILD G +DQ
Sbjct: 335 HFNALYDNLLEQNLLKIIESYSCVELSHISKVIGLNLQQVEGKLSQMILDKVFYGVLDQG 394
Query: 321 NRLLERGDRSKGMKKYTA 338
N L D + Y A
Sbjct: 395 NGWLIIYDEPRKDAAYEA 412
>WB|WBGene00004462 [details] [associations]
symbol:rpn-6.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006915
GO:GO:0006950 GO:GO:0002119 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0043248 GO:GO:0006511 EMBL:FO081266
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
GeneTree:ENSGT00530000063301 GO:GO:0022624 PIR:H88493
RefSeq:NP_001022621.1 RefSeq:NP_001022622.1
ProteinModelPortal:Q20938 SMR:Q20938 STRING:Q20938 PaxDb:Q20938
PRIDE:Q20938 EnsemblMetazoa:F57B9.10a GeneID:175972
KEGG:cel:CELE_F57B9.10 UCSC:F57B9.10a CTD:175972 WormBase:F57B9.10a
WormBase:F57B9.10b HOGENOM:HOG000210093 InParanoid:Q20938 KO:K03036
OMA:SGILDQG NextBio:890556 Uniprot:Q20938
Length = 438
Score = 220 (82.5 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 62/262 (23%), Positives = 126/262 (48%)
Query: 69 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXX 128
+L +++ D+ Y + + +L + ++ D D L+EV E + Y
Sbjct: 147 RLVRLYNDLQRYTQALPLAADLIRELKKVDDKD------VLVEVELEESKAYYNLSNIGR 200
Query: 129 XXXXXXXXXXXXSAI-PHPRIMGIIRECGGKMHMA-ERQWADAATDFFEAFKNYDEAGNQ 186
+AI +PR+ + G +H A E+ + A + F+EAF+ YD +
Sbjct: 201 ARASLTGARTTANAIYVNPRMQAALDLQSGILHAADEKDFKTAFSYFYEAFEGYDSVDEK 260
Query: 187 -RRIQCLKYLVLANMLME--SEVNPF-DGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFE 242
+ LKY++L ++++ EVN + A Y N ++ AM + AA Q+ + +F+
Sbjct: 261 VSALTALKYMLLCKVMLDLPDEVNSLLSAKLALKY-NGSDLDAMKAIAAAAQKRSLKDFQ 319
Query: 243 KILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQ 302
S + + DP +R + L + + + L ++I+PY+ ++I +++++ + VE+
Sbjct: 320 VAFGSFPQELQMDPVVRKHFHSLSERMLEKDLCRIIEPYSFVQIEHVAQQIGIDRSKVEK 379
Query: 303 LLVSLILDNRIDGHIDQVNRLL 324
L +ILD ++ G +DQ +L
Sbjct: 380 KLSQMILDQKLSGSLDQGEGML 401
>UNIPROTKB|Q20938 [details] [associations]
symbol:rpn-6.1 "Probable 26S proteasome regulatory subunit
rpn-6.1" species:6239 "Caenorhabditis elegans" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0043248 "proteasome assembly" evidence=IDA] [GO:0006950
"response to stress" evidence=IDA] [GO:0022624 "proteasome
accessory complex" evidence=TAS] [GO:0008340 "determination of
adult lifespan" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0006915 GO:GO:0006950 GO:GO:0002119 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0043248 GO:GO:0006511
EMBL:FO081266 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
GeneTree:ENSGT00530000063301 GO:GO:0022624 PIR:H88493
RefSeq:NP_001022621.1 RefSeq:NP_001022622.1
ProteinModelPortal:Q20938 SMR:Q20938 STRING:Q20938 PaxDb:Q20938
PRIDE:Q20938 EnsemblMetazoa:F57B9.10a GeneID:175972
KEGG:cel:CELE_F57B9.10 UCSC:F57B9.10a CTD:175972 WormBase:F57B9.10a
WormBase:F57B9.10b HOGENOM:HOG000210093 InParanoid:Q20938 KO:K03036
OMA:SGILDQG NextBio:890556 Uniprot:Q20938
Length = 438
Score = 220 (82.5 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 62/262 (23%), Positives = 126/262 (48%)
Query: 69 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXX 128
+L +++ D+ Y + + +L + ++ D D L+EV E + Y
Sbjct: 147 RLVRLYNDLQRYTQALPLAADLIRELKKVDDKD------VLVEVELEESKAYYNLSNIGR 200
Query: 129 XXXXXXXXXXXXSAI-PHPRIMGIIRECGGKMHMA-ERQWADAATDFFEAFKNYDEAGNQ 186
+AI +PR+ + G +H A E+ + A + F+EAF+ YD +
Sbjct: 201 ARASLTGARTTANAIYVNPRMQAALDLQSGILHAADEKDFKTAFSYFYEAFEGYDSVDEK 260
Query: 187 -RRIQCLKYLVLANMLME--SEVNPF-DGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFE 242
+ LKY++L ++++ EVN + A Y N ++ AM + AA Q+ + +F+
Sbjct: 261 VSALTALKYMLLCKVMLDLPDEVNSLLSAKLALKY-NGSDLDAMKAIAAAAQKRSLKDFQ 319
Query: 243 KILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQ 302
S + + DP +R + L + + + L ++I+PY+ ++I +++++ + VE+
Sbjct: 320 VAFGSFPQELQMDPVVRKHFHSLSERMLEKDLCRIIEPYSFVQIEHVAQQIGIDRSKVEK 379
Query: 303 LLVSLILDNRIDGHIDQVNRLL 324
L +ILD ++ G +DQ +L
Sbjct: 380 KLSQMILDQKLSGSLDQGEGML 401
>ASPGD|ASPL0000014128 [details] [associations]
symbol:AN10519 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:BN001302 Gene3D:1.25.40.10 GO:GO:0000502
InterPro:IPR013143 SMART:SM00753 HOGENOM:HOG000210093 OMA:SGILDQG
EnsemblFungi:CADANIAT00004435 Uniprot:C8V4A5
Length = 424
Score = 207 (77.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 74/316 (23%), Positives = 146/316 (46%)
Query: 54 LEEAKNERLWF-KTNL--KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLL 110
+E A ER F + NL +L I+ Y ++ L + +R DD+ L+
Sbjct: 115 IEWAVAERRSFLRQNLETRLVAIFMQKQSYYDALNLINSLLRELKR---LDDKL---MLV 168
Query: 111 EVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAI-PHPRIMGIIRECGGKMHMAERQWADA 169
EV +E ++Y +++ P + + G +H ++ + +
Sbjct: 169 EVQLLESRVYHALGNQAKARAALTAARTSAASVYTPPNLQAGLDMQSGMLHAEDKDFNTS 228
Query: 170 ATDFFEAFKNYDEAGN-QRRIQCLKYLVLANMLME--SEVNPFDG-QEAKPYKNDPEILA 225
+ F EA + Y ++ L+Y++L +++ +V G ++A+ Y + P + A
Sbjct: 229 YSYFIEALEGYSSLDEGEKATAALQYMLLCKIMLNLVDDVTTLLGSKQAQKYAS-PRLEA 287
Query: 226 MTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIR 285
M + A+ + E+EK L R + D FIRN++ L + Q L+K+I+P++R+
Sbjct: 288 MKAVARAHANRSLEEYEKALSDYRFELGSDAFIRNHLRRLYDAMLEQNLIKVIEPFSRVE 347
Query: 286 IPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTA----IDK 341
+ I+K + + + VE+ L +ILD I G +DQ L D ++ + Y A I +
Sbjct: 348 LDHIAKMVGLDTQQVERKLSQMILDKVIIGVLDQGAGCLIVYDETERDQAYDAALETIAR 407
Query: 342 WNSQLRSLYQTVSNRV 357
++ + SLY ++++
Sbjct: 408 LSNVVESLYTNQASQL 423
>UNIPROTKB|G4NAA5 [details] [associations]
symbol:MGG_03211 "26S proteasome non-ATPase regulatory
subunit 11" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0000502 EMBL:CM001234 InterPro:IPR013143
SMART:SM00753 KO:K03036 RefSeq:XP_003716769.1
EnsemblFungi:MGG_03211T0 GeneID:2676755 KEGG:mgr:MGG_03211
Uniprot:G4NAA5
Length = 423
Score = 206 (77.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 80/351 (22%), Positives = 156/351 (44%)
Query: 12 IKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWF-KTNLKL 70
+ S+ + + K + ++DF G N + L+ T +E A +ER F + NL+
Sbjct: 76 VLSSFAKAKTAKLVRQLLDFFDGIP--NTTDLQ--VSVTKSCIEWATSERRTFLRQNLET 131
Query: 71 CKIWFDMGE--YGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXX 128
+ M + Y ++ L K +R DD+ L+EV +E ++Y
Sbjct: 132 RLVTLHMAKQSYYEALTLINGLLKELKR---LDDKL---MLVEVQLLESRVYHALGNISK 185
Query: 129 XXXXXXXXXXXXSAI-PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY-DEAGNQ 186
+++ P + + G +H ++ + A + F EA Y + +
Sbjct: 186 ARAALTSARTSAASVYTPPMLQANLDMQSGMLHAEDKDFNTAFSYFIEALDGYHSQDATK 245
Query: 187 RRIQCLKYLVLANMLME--SEVNPF-DGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFEK 243
L+Y++L +++ +VN ++A Y + AM + A+ + E+E+
Sbjct: 246 NATAALQYMLLCKIMLNLVDDVNTLMASKQAAKYAGQ-SLEAMKAIARAHANRSLEEYEQ 304
Query: 244 ILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQL 303
L + R + D F+R+++ L + Q L+K+I+P++R+ I I+K + + + VE+
Sbjct: 305 SLAAYRHELGGDAFVRSHLRRLYDAMLEQNLIKVIEPFSRVEIDHIAKMVGLDTQQVERK 364
Query: 304 LVSLILDNRIDGHIDQVNRLLERGDRSKGMKKY----TAIDKWNSQLRSLY 350
L +ILD I G +DQ L D ++ + Y I+K +S + LY
Sbjct: 365 LSQMILDKVIIGVLDQGAGCLIIFDETQRDEAYDHALATIEKLSSVVDVLY 415
>SGD|S000002255 [details] [associations]
symbol:RPN6 "Essential, non-ATPase regulatory subunit of the
26S proteasome lid" species:4932 "Saccharomyces cerevisiae"
[GO:0005198 "structural molecule activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0043248
"proteasome assembly" evidence=IMP] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0034515 "proteasome storage granule" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
SGD:S000002255 GO:GO:0005198 EMBL:BK006938 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0008541
GO:GO:0006511 EMBL:X95644 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 GeneTree:ENSGT00530000063301 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000210093 KO:K03036 OrthoDB:EOG4K3Q51
EMBL:Z74145 PIR:S67639 RefSeq:NP_010186.1 ProteinModelPortal:Q12377
SMR:Q12377 DIP:DIP-1581N IntAct:Q12377 MINT:MINT-396028
STRING:Q12377 PaxDb:Q12377 PeptideAtlas:Q12377 EnsemblFungi:YDL097C
GeneID:851461 KEGG:sce:YDL097C OMA:DAMKCVA NextBio:968741
Genevestigator:Q12377 GermOnline:YDL097C Uniprot:Q12377
Length = 434
Score = 205 (77.2 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 67/281 (23%), Positives = 130/281 (46%)
Query: 52 KALEEAKNE-RLWFKTNL--KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQ 108
K++E AK E R++ K +L KL + + +Y ++ +L + ++ DD+
Sbjct: 120 KSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKK---LDDKPS--- 173
Query: 109 LLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHP-RIMGIIRECGGKMHMAERQWA 167
L++V+ +E ++Y + ++I P + + + G +H ++ +
Sbjct: 174 LVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYK 233
Query: 168 DAATDFFEAFKNYDEAGN----QRRIQCLKYLVLANMLME--SEV-NPFDGQEAKPYKND 220
A + FFE+F++Y ++ Q LKY++L+ +++ +V N + + K
Sbjct: 234 TAFSYFFESFESYHNLTTHNSYEKACQVLKYMLLSKIMLNLIDDVKNILNAKYTKETYQS 293
Query: 221 PEILAMTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKP 280
I AM + AY +++F LK K +M D R++ L + L K+I+P
Sbjct: 294 RGIDAMKAVAEAYNNRSLLDFNTALKQYEKELMGDELTRSHFNALYDTLLESNLCKIIEP 353
Query: 281 YTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVN 321
+ + I ISK + + + VE L +ILD G +DQ N
Sbjct: 354 FECVEISHISKIIGLDTQQVEGKLSQMILDKIFYGVLDQGN 394
>GENEDB_PFALCIPARUM|PF14_0025 [details] [associations]
symbol:PF14_0025 "proteosome subunit, putative"
species:5833 "Plasmodium falciparum" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004175 EMBL:AE014187
GO:GO:0005838 KO:K03036 RefSeq:XP_001348198.1
ProteinModelPortal:Q8IM66 IntAct:Q8IM66 MINT:MINT-1600102
PRIDE:Q8IM66 EnsemblProtists:PF14_0025:mRNA GeneID:811608
KEGG:pfa:PF14_0025 EuPathDB:PlasmoDB:PF3D7_1402300
HOGENOM:HOG000281396 ProtClustDB:CLSZ2444932 Uniprot:Q8IM66
Length = 666
Score = 158 (60.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 48/170 (28%), Positives = 90/170 (52%)
Query: 185 NQRRIQCLKYLVLANMLMES---EVNPFDGQEAK-PYKNDPEILAMTNLIAAYQRNEIIE 240
N + I LKY++L +L E+ E+N + K Y + EI + ++ +Y+ +
Sbjct: 486 NVKIIIPLKYMLLCKVLEENNRKEINNILCENNKLNYVSHKEIQILLDISKSYENRSLDI 545
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKI+K++ I D I NY+++L + + + +LK+I+ Y+ I + +I ++LN+ +
Sbjct: 546 FEKIIKNSLFLINIDKVIYNYLKELYELLLEKNILKIIEAYSCIDLHYIGQKLNLDINKI 605
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKY-TAIDKWNSQLRSL 349
L +ILD +++G +DQ +L D K Y +D N+ S+
Sbjct: 606 ISKLSEMILDKKLNGTLDQNVGILILYDDMPETKMYQNVLDIINNLTESV 655
Score = 41 (19.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLL 43
+ + Y + TYI Y+ NN MDF+S + +S+L
Sbjct: 264 LYECYETLYTYI-------YNSH--NNTMDFLSKKHNDFYSIL 297
>UNIPROTKB|Q8IM66 [details] [associations]
symbol:PF14_0025 "Proteosome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004175
EMBL:AE014187 GO:GO:0005838 KO:K03036 RefSeq:XP_001348198.1
ProteinModelPortal:Q8IM66 IntAct:Q8IM66 MINT:MINT-1600102
PRIDE:Q8IM66 EnsemblProtists:PF14_0025:mRNA GeneID:811608
KEGG:pfa:PF14_0025 EuPathDB:PlasmoDB:PF3D7_1402300
HOGENOM:HOG000281396 ProtClustDB:CLSZ2444932 Uniprot:Q8IM66
Length = 666
Score = 158 (60.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 48/170 (28%), Positives = 90/170 (52%)
Query: 185 NQRRIQCLKYLVLANMLMES---EVNPFDGQEAK-PYKNDPEILAMTNLIAAYQRNEIIE 240
N + I LKY++L +L E+ E+N + K Y + EI + ++ +Y+ +
Sbjct: 486 NVKIIIPLKYMLLCKVLEENNRKEINNILCENNKLNYVSHKEIQILLDISKSYENRSLDI 545
Query: 241 FEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELNVPEKDV 300
FEKI+K++ I D I NY+++L + + + +LK+I+ Y+ I + +I ++LN+ +
Sbjct: 546 FEKIIKNSLFLINIDKVIYNYLKELYELLLEKNILKIIEAYSCIDLHYIGQKLNLDINKI 605
Query: 301 EQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKY-TAIDKWNSQLRSL 349
L +ILD +++G +DQ +L D K Y +D N+ S+
Sbjct: 606 ISKLSEMILDKKLNGTLDQNVGILILYDDMPETKMYQNVLDIINNLTESV 655
Score = 41 (19.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 1 MMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLL 43
+ + Y + TYI Y+ NN MDF+S + +S+L
Sbjct: 264 LYECYETLYTYI-------YNSH--NNTMDFLSKKHNDFYSIL 297
>FB|FBgn0027054 [details] [associations]
symbol:CSN4 "COP9 complex homolog subunit 4" species:7227
"Drosophila melanogaster" [GO:0008180 "signalosome"
evidence=ISS;NAS;IMP;TAS;IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0001751 "compound eye photoreceptor cell
differentiation" evidence=IMP] [GO:0000338 "protein deneddylation"
evidence=IMP] [GO:0019781 "NEDD8 activating enzyme activity"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0032435 "negative regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0007095 "mitotic
G2 DNA damage checkpoint" evidence=IGI] [GO:0046331 "lateral
inhibition" evidence=IMP] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:AE013599 GO:GO:0005737 GO:GO:0007095
GO:GO:0050821 GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0044212 GO:GO:0046331 GO:GO:0008180 GO:GO:0001751
GO:GO:0032435 GO:GO:0000338 GO:GO:0019781 eggNOG:NOG298640
KO:K12178 OMA:YNELSYR GeneTree:ENSGT00530000063471 EMBL:AF129082
EMBL:BT004883 RefSeq:NP_001163080.1 RefSeq:NP_477444.1
UniGene:Dm.3377 ProteinModelPortal:Q9V345 SMR:Q9V345 IntAct:Q9V345
MINT:MINT-279079 STRING:Q9V345 PaxDb:Q9V345 PRIDE:Q9V345
EnsemblMetazoa:FBtr0088859 EnsemblMetazoa:FBtr0301230 GeneID:35759
KEGG:dme:Dmel_CG8725 CTD:35759 FlyBase:FBgn0027054
InParanoid:Q9V345 OrthoDB:EOG441NSS PhylomeDB:Q9V345
GenomeRNAi:35759 NextBio:795082 Bgee:Q9V345 GermOnline:CG8725
Uniprot:Q9V345
Length = 407
Score = 110 (43.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 37/133 (27%), Positives = 65/133 (48%)
Query: 223 ILAMTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYT 282
IL L +R+E+ EFE +L+ ++K D + I D + V LL K Y
Sbjct: 270 ILEKMYLERIIRRSELQEFEALLQDHQKAATSDG---SSILD--RAVFEHNLLSASKLYN 324
Query: 283 RIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKW 342
I + L++P E++ +I + R++GHIDQ++ ++ +R + +W
Sbjct: 325 NITFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQISAIVHFENRE-------LLPQW 377
Query: 343 NSQLRSL-YQTVS 354
+ Q++SL YQ S
Sbjct: 378 DRQIQSLCYQVNS 390
Score = 57 (25.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 26/93 (27%), Positives = 42/93 (45%)
Query: 145 HPRIMGIIRECGG-KMHMA---ER--QWADAATDFFEAFKNYDEAGNQRRIQCL--KYLV 196
+PR++ + G + H+A ER QW DAAT + Q ++C YL
Sbjct: 100 NPRVISFEEQVAGIRFHLANIYERNQQWRDAATVLVGI--PLETGQKQYSVECKLGTYLK 157
Query: 197 LANMLMESEVNPFDGQEAKPYKNDPEIL-AMTN 228
+A + +E D +A+ + N +L A TN
Sbjct: 158 IARLYLEDN----DSVQAELFINRASLLQAETN 186
>WB|WBGene00000813 [details] [associations]
symbol:csn-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0030154
GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910
GO:GO:0040035 GO:GO:0008180 KO:K12175 InterPro:IPR019585
Pfam:PF10602 EMBL:AL132895 RefSeq:NP_507507.1
ProteinModelPortal:Q9GS00 DIP:DIP-26112N IntAct:Q9GS00
MINT:MINT-1040684 STRING:Q9GS00 PaxDb:Q9GS00
EnsemblMetazoa:Y59A8A.1.1 EnsemblMetazoa:Y59A8A.1.2 GeneID:180168
KEGG:cel:CELE_Y59A8A.1 UCSC:Y59A8A.1 CTD:180168 WormBase:Y59A8A.1
eggNOG:NOG325807 GeneTree:ENSGT00510000046608 HOGENOM:HOG000017865
InParanoid:Q9GS00 OMA:RAMEDLF NextBio:908304 Uniprot:Q9GS00
Length = 601
Score = 125 (49.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 30/144 (20%), Positives = 78/144 (54%)
Query: 210 DGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNV 269
+G K +++P+++ L+ +Y + +I++S + ++ DPFI +++L + +
Sbjct: 382 NGTFRKLLESEPQLI---ELLGSYTSSRFGRCFEIMRSVKPRLLLDPFISRNVDELFEKI 438
Query: 270 RTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQ---VNRLLER 326
R + +L+ ++PY+ I++ +++ + + +++ L+ LI + IDQ + R+L+
Sbjct: 439 RQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQKHVSLKIDQNEGIVRILDE 498
Query: 327 GDRSKGMKKYTAI-DKWNSQLRSL 349
D + +K+ D+ + +SL
Sbjct: 499 RDENAILKRVNVTCDRATQKAKSL 522
>UNIPROTKB|Q9GS00 [details] [associations]
symbol:csn-1 "COP9 signalosome complex subunit 1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0009792 GO:GO:0005737 GO:GO:0030154 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0040035
GO:GO:0008180 KO:K12175 InterPro:IPR019585 Pfam:PF10602
EMBL:AL132895 RefSeq:NP_507507.1 ProteinModelPortal:Q9GS00
DIP:DIP-26112N IntAct:Q9GS00 MINT:MINT-1040684 STRING:Q9GS00
PaxDb:Q9GS00 EnsemblMetazoa:Y59A8A.1.1 EnsemblMetazoa:Y59A8A.1.2
GeneID:180168 KEGG:cel:CELE_Y59A8A.1 UCSC:Y59A8A.1 CTD:180168
WormBase:Y59A8A.1 eggNOG:NOG325807 GeneTree:ENSGT00510000046608
HOGENOM:HOG000017865 InParanoid:Q9GS00 OMA:RAMEDLF NextBio:908304
Uniprot:Q9GS00
Length = 601
Score = 125 (49.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 30/144 (20%), Positives = 78/144 (54%)
Query: 210 DGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFEKILKSNRKTIMDDPFIRNYIEDLLKNV 269
+G K +++P+++ L+ +Y + +I++S + ++ DPFI +++L + +
Sbjct: 382 NGTFRKLLESEPQLI---ELLGSYTSSRFGRCFEIMRSVKPRLLLDPFISRNVDELFEKI 438
Query: 270 RTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQ---VNRLLER 326
R + +L+ ++PY+ I++ +++ + + +++ L+ LI + IDQ + R+L+
Sbjct: 439 RQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQKHVSLKIDQNEGIVRILDE 498
Query: 327 GDRSKGMKKYTAI-DKWNSQLRSL 349
D + +K+ D+ + +SL
Sbjct: 499 RDENAILKRVNVTCDRATQKAKSL 522
>UNIPROTKB|P68353 [details] [associations]
symbol:CSN2 "COP9 signalosome complex subunit 2"
species:3712 "Brassica oleracea" [GO:0005515 "protein binding"
evidence=IPI] GO:GO:0007275 GO:GO:0005737 GO:GO:0009585
GO:GO:0008180 IntAct:P68353 Uniprot:P68353
Length = 39
Score = 64 (27.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 178 KNYDEAGNQRRIQ 190
KNYD AGNQRRIQ
Sbjct: 20 KNYDHAGNQRRIQ 32
Score = 54 (24.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 13 KSAVTRNYSEK 23
KSAVTRNYSEK
Sbjct: 1 KSAVTRNYSEK 11
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 358 341 0.00095 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 608 (65 KB)
Total size of DFA: 234 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.85u 0.14s 26.99t Elapsed: 00:00:01
Total cpu time: 26.86u 0.14s 27.00t Elapsed: 00:00:01
Start: Sat May 11 05:50:26 2013 End: Sat May 11 05:50:27 2013