Citrus Sinensis ID: 018297

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MTCASAAVSPTLRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSHGKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWDEKLNFPEDAHIHKEVIPSNGALTFGEYTERLLDKYYHLKT
cccccccccccccccEEEccccccccHHHHHHHHHHHcccEEEEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHccccccccccccccccccccccccccccHHHHccccccccccccHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcccccccccEEEccccccccccccccccccccEEccccccccHHcccccccccccccccccccccEEEcccccEEEEccccccEEEEHHHHHHHHHccEEcccccEEEccccccccccccEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHccccc
ccccHHccccccEEEEEEHHHHHcccccHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccccEccccccccccccHHHccccccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccccEEEEEEEcccccccccccccccccHccccccccHHHEEcHHHHcccccccccccccccEEEEEccccEEEccccccEEEEEHHHHHHHHHcccEEEEccEEEcccccccccccccEEHEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHcccc
mtcasaavsptlRTVTISYSELKDKNADLSMKIeqgfgpnglgilsvtdvpgfsSLRQNLLHLAprlanlpedvkkdledhhsrynfgwshgkeklesgnpdmlkgsfyanplldvpttethlierypsycgsniwphsalpELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSrchkgrllyyfpaqqsncirdgdsmsswcgwhtdhasltgltcgmftkdgtvipcpdsaaglyirtrTDQIVKVVFREDEIAYQIGETTEILSRSYlcatphcvraprgeeasgidrstfalfmqpdwdeklnfpedahihkevipsngaltfGEYTERLLDKYYHLKT
mtcasaavsptlrtvTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRynfgwshgkeklESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVraprgeeasgidRSTFALFMQPDWDEKLNFPEDAHIHkevipsngaltfgEYTERLLDKYYHLKT
MTCASAAVSPTLRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSHGKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWDEKLNFPEDAHIHKEVIPSNGALTFGEYTERLLDKYYHLKT
*************TVTISY***********MKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANL*************RYNFGW**************LKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWDEKLNFPEDAHIHKEVIPSNGALTFGEYTERLLDKYYH***
**************VTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSHGKEKLE**NPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQ************SWCGWHTDHASLTGLTCGMFTK***********AGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGE*ASGIDRSTFALFMQPDWDEKLNFPEDAH******PSNGALTFGEYTERLLDKY*H***
********SPTLRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSHGKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWDEKLNFPEDAHIHKEVIPSNGALTFGEYTERLLDKYYHLKT
********SPTLRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSHGKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQ***********SSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWDEKLNFPEDAHIHKEVIPSNGALTFGEYTERLLDKYYHLK*
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MTCASAAVSPTLRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSHGKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWDEKLNFPEDAHIHKEVIPSNGALTFGEYTERLLDKYYHLKT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
297738867442 unnamed protein product [Vitis vinifera] 0.997 0.807 0.819 1e-177
225445324405 PREDICTED: uncharacterized protein LOC10 0.997 0.881 0.819 1e-177
356542742382 PREDICTED: uncharacterized protein LOC10 0.991 0.929 0.795 1e-171
356531663382 PREDICTED: uncharacterized protein LOC10 0.991 0.929 0.795 1e-171
449443137358 PREDICTED: uncharacterized protein LOC10 1.0 1.0 0.762 1e-168
255549042358 conserved hypothetical protein [Ricinus 0.988 0.988 0.771 1e-167
224143477343 predicted protein [Populus trichocarpa] 0.932 0.973 0.775 1e-158
334186491357 dioxygenase domain-containing protein [A 0.994 0.997 0.725 1e-155
297790500371 predicted protein [Arabidopsis lyrata su 0.994 0.959 0.690 1e-150
218197244404 hypothetical protein OsI_20925 [Oryza sa 0.972 0.861 0.682 1e-143
>gi|297738867|emb|CBI28112.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 295/360 (81%), Positives = 326/360 (90%), Gaps = 3/360 (0%)

Query: 1   MTCASAAVSPTLRTVT--ISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQ 58
           M+C S A  P L+TVT  ISY EL DKNADLSMKIE+GFGPNGLGIL++ DVPGFS LRQ
Sbjct: 84  MSCKSPA-PPVLQTVTVTISYPELIDKNADLSMKIEEGFGPNGLGILTIADVPGFSLLRQ 142

Query: 59  NLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSHGKEKLESGNPDMLKGSFYANPLLDVPT 118
           NLL L+PRLA+LPE+VKK+LED +SRYNFGWSHGKEKLESG PDMLKGSFYANP+LD+PT
Sbjct: 143 NLLRLSPRLASLPEEVKKELEDPNSRYNFGWSHGKEKLESGKPDMLKGSFYANPILDIPT 202

Query: 119 TETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKE 178
           TE  LI+RYPSYCG NIWP  ALPELEVAFKALGKLI+DVG M+AYHCDQYVS+ MK+KE
Sbjct: 203 TEAPLIQRYPSYCGPNIWPKHALPELEVAFKALGKLILDVGSMVAYHCDQYVSRLMKIKE 262

Query: 179 NEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKD 238
           +EGLE+ILL SRCHKGRLLYYFPA++SNC RDGDSMSSWCGWHTDH SLTGLTCGMF +D
Sbjct: 263 DEGLEKILLRSRCHKGRLLYYFPAEKSNCSRDGDSMSSWCGWHTDHGSLTGLTCGMFMRD 322

Query: 239 GTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRG 298
              IPCPDSAAGLYI+TRTDQIVKVVF EDEIAYQIGET EILSR YLCATPHCVRAP+G
Sbjct: 323 AVEIPCPDSAAGLYIKTRTDQIVKVVFGEDEIAYQIGETAEILSRGYLCATPHCVRAPKG 382

Query: 299 EEASGIDRSTFALFMQPDWDEKLNFPEDAHIHKEVIPSNGALTFGEYTERLLDKYYHLKT 358
           EEASG++RSTFALFMQPDWDEKLNFPE+ HIH+E+IPSN ALTFGEY+E+LLDKYYHLK 
Sbjct: 383 EEASGVERSTFALFMQPDWDEKLNFPEEVHIHQELIPSNCALTFGEYSEKLLDKYYHLKN 442

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225445324|ref|XP_002284748.1| PREDICTED: uncharacterized protein LOC100256125 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356542742|ref|XP_003539824.1| PREDICTED: uncharacterized protein LOC100802243 [Glycine max] Back     alignment and taxonomy information
>gi|356531663|ref|XP_003534396.1| PREDICTED: uncharacterized protein LOC100811760 [Glycine max] Back     alignment and taxonomy information
>gi|449443137|ref|XP_004139337.1| PREDICTED: uncharacterized protein LOC101206989 [Cucumis sativus] gi|449518117|ref|XP_004166090.1| PREDICTED: uncharacterized LOC101206989 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255549042|ref|XP_002515577.1| conserved hypothetical protein [Ricinus communis] gi|223545521|gb|EEF47026.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224143477|ref|XP_002324969.1| predicted protein [Populus trichocarpa] gi|222866403|gb|EEF03534.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|334186491|ref|NP_193076.3| dioxygenase domain-containing protein [Arabidopsis thaliana] gi|332657875|gb|AEE83275.1| dioxygenase domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297790500|ref|XP_002863135.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297308969|gb|EFH39394.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|218197244|gb|EEC79671.1| hypothetical protein OsI_20925 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
ASPGD|ASPL0000056906362 AN0427 [Emericella nidulans (t 0.650 0.643 0.344 4.2e-31
CGD|CAL0003928454 orf19.6606 [Candida albicans ( 0.318 0.251 0.367 5e-26
UNIPROTKB|Q59NK9454 CaO19.6606 "Putative uncharact 0.318 0.251 0.367 5e-26
TAIR|locus:2077289403 AT3G63290 [Arabidopsis thalian 0.525 0.466 0.286 9.8e-10
ASPGD|ASPL0000056906 AN0427 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 86/250 (34%), Positives = 122/250 (48%)

Query:    13 RTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDV-PGFSSLRQNLLHLAPRLANLP 71
             + VT+S  EL D        + + FGP+ LGI+ V D+ P F  LR  +L  A  +A L 
Sbjct:    10 QAVTVSLQELIDGTVSFDT-LTEAFGPSSLGIIVVKDLDPKFQHLRAQVLSNASYVAALK 68

Query:    72 EDVKKDLEDHHSRYNFGWSHGKEKLESGNPDMLKGSFYAN------PLLDVPTTETHLIE 125
              D  + L    ++Y  GWS GKE L SG+ D LKGS+Y N      P L    ++ H   
Sbjct:    69 NDELESLTSPSAKYLIGWSCGKETLRSGHFDTLKGSYYVNCAFYKDPSLQGAPSDEH--P 126

Query:   126 RYPSYCGSNIWPH-SALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQ 184
               P Y   NIWP    LP      + L +LI+D  +++A  CD+Y    ++  +   LE+
Sbjct:   127 DLPEYTAPNIWPDVQKLPNFRSGLEELCRLIIDTAVLVARACDRYAEGNIEGYKAGYLEK 186

Query:   185 ILLHSRCHKGRLLYYFPA------QQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKD 238
             ++  S   K RLL+YFPA      +++    + +    WC  H DH  LTGLT  MF  +
Sbjct:   187 VVRGSLTTKARLLHYFPAPDGVHAEEARKDEENEEDDDWCATHLDHGCLTGLTSAMFVDE 246

Query:   239 GTVIPCPDSA 248
                 P   SA
Sbjct:   247 DAHPPASSSA 256
GO:0008150 "biological_process" evidence=ND
GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
CGD|CAL0003928 orf19.6606 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59NK9 CaO19.6606 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
TAIR|locus:2077289 AT3G63290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-14
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-05
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 0.003
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information 
 Score = 73.6 bits (181), Expect = 1e-14
 Identities = 66/280 (23%), Positives = 102/280 (36%), Gaps = 45/280 (16%)

Query: 43  GILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSHGKEKLESGNPD 102
           G   + +    ++L      LA +   LP + K  +     R + G++    +L  G PD
Sbjct: 37  GFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHRGYTPHGGELTDGEPD 96

Query: 103 MLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLML 162
             K      P LD                G N+WP  A+P L  A     + +  VGL L
Sbjct: 97  -YKEGLDMGPDLDAELAGVRAGTPLH---GPNLWP--AIPGLRDALLQYYRAMTAVGLRL 150

Query: 163 AYHCDQYVSKGMKMKENEGLEQILLHSRCHKG----RLLYYFPAQQSNCIRDGDSMSSWC 218
                + ++ G+       L +     R        RLL Y P++ +    DG       
Sbjct: 151 L----RAIALGL------DLPEDFFDKRTSDPNSVLRLLRY-PSRPAREGADGV------ 193

Query: 219 GWHTDHASLTGLTCGMFTKDGTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETT 278
           G HTD+  LT L               D   GL +R      + V      +   IG+  
Sbjct: 194 GAHTDYGLLTLLF-------------QDDVGGLEVRPPNGGWLDVPPIPGTLVVNIGDML 240

Query: 279 EILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWD 318
           E  +   L +T H VR P      G+DR +   F++P++D
Sbjct: 241 ERWTNGRLRSTVHRVRNPP-----GVDRYSIPFFLEPNFD 275

Length = 322
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 358
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02997325 flavonol synthase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02904357 oxidoreductase 100.0
PLN02704335 flavonol synthase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.88
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.87
PLN03176120 flavanone-3-hydroxylase; Provisional 99.61
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.22
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 93.33
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.2
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 92.88
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.1e-69  Score=515.33  Aligned_cols=309  Identities=19%  Similarity=0.274  Sum_probs=258.2

Q ss_pred             CcceeEEecccccccc----hHHHHHHHhhhCCCCceEEEEEcCCCCHHHHHHHHHHHhHHhCCChhhhhhhccCCCCCc
Q 018297           11 TLRTVTISYSELKDKN----ADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYN   86 (358)
Q Consensus        11 ~~~lp~Idl~~l~~~~----~~~~~~l~~A~~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~   86 (358)
                      +++||+|||+.+.+++    .+++++|.+||++  ||||||+||||+.++++++++++++||+||.|+|+++........
T Consensus         3 ~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~--~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~   80 (320)
T PTZ00273          3 RASLPVIDVSPLFGGESAEKMRVAKQIDEACRT--WGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLH   80 (320)
T ss_pred             CCCCCEEecHHhcCCChHHHHHHHHHHHHHHHh--CCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCC
Confidence            5679999999997654    3578899999999  899999999999999999999999999999999999866544567


Q ss_pred             ccccc-CcccccCCCCCCcccceecCCCCCCCCCchhhhhcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 018297           87 FGWSH-GKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYH  165 (358)
Q Consensus        87 ~GY~~-~~e~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~f~~~~~~y~~~~~~la~~Ll~~  165 (358)
                      +||.+ +.+....+...|++|+|.++.  +.+.+++......+ +.++|.||+ .+|+|++++++|+++|.+++..|+++
T Consensus        81 ~GY~~~~~e~~~~~~~~d~kE~~~~~~--~~~~~~~~~~~~~~-~~~~n~wP~-~~p~fr~~~~~y~~~~~~l~~~ll~~  156 (320)
T PTZ00273         81 RGYGAFGAEQLDPSKPYDYKETFDMGC--HLPKDHPDVMAGKP-LRGPNNHPT-QVEGWMELMETHYRDMQALALVLLRA  156 (320)
T ss_pred             CCCCCccccccCCCCCCCccceEEeec--cCCcccchhhcccc-ccCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89987 555443345567999999873  33433332212222 357899997 78999999999999999999999999


Q ss_pred             HHHHHHhcCCCCchhHHHHHHhccccccceeeccCCCCCCccccCCCCCCCccccccccCccccccccccccCCCccCCC
Q 018297          166 CDQYVSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCP  245 (358)
Q Consensus       166 l~~~~~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Ypp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~~~~~~~~~~~~~q  245 (358)
                      ++    ++||+++++| .+.+.++.+ .+|++||||++...    .  ..+|+++|||+|+||||+             |
T Consensus       157 la----~~Lgl~~~~f-~~~~~~~~~-~lrl~~YP~~~~~~----~--~~~g~~~HTD~g~lTlL~-------------q  211 (320)
T PTZ00273        157 LA----LAIGLREDFF-DSKFMEPLS-VFRMKHYPALPQTK----K--GRTVCGEHTDYGIITLLY-------------Q  211 (320)
T ss_pred             HH----HHhCcCHHHH-HHhhCCCcc-eeeeeecCCCCCcc----c--cCcccccccCCCeEEEEe-------------c
Confidence            99    8999986554 445555554 89999999987532    1  278999999999999999             7


Q ss_pred             CCCCceEEEcCCCcEEEeccCCCeEEEEcchhhHhhhCCcccccCCeeeCCCCCCCCCCCceEEEEeEcCCCCCccCCCc
Q 018297          246 DSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWDEKLNFPE  325 (358)
Q Consensus       246 d~~~GLqV~~~~g~W~~V~~~~g~~vVnvGd~l~~~TnG~~~s~~HRV~~~~~~~~~~~~R~S~~~F~~P~~d~~i~~p~  325 (358)
                      |.++||||++++|+|++|+|.||++|||+||+||+||||+|+||+|||+++      ..+|||++||++|+.|++|.+++
T Consensus       212 d~~~GLqV~~~~g~Wi~V~p~pg~lvVNvGD~l~~~TnG~~kSt~HRVv~~------~~~R~Si~~F~~p~~d~~i~pl~  285 (320)
T PTZ00273        212 DSVGGLQVRNLSGEWMDVPPLEGSFVVNIGDMMEMWSNGRYRSTPHRVVNT------GVERYSMPFFCEPNPNVIIKCLD  285 (320)
T ss_pred             CCCCceEEECCCCCEEeCCCCCCeEEEEHHHHHHHHHCCeeeCCCccccCC------CCCeEEEEEEEcCCCCceEecCc
Confidence            789999999889999999999999999999999999999999999999855      35899999999999999999655


Q ss_pred             ccccccccCCCCCCCCHHHHHHHHHHHHcccC
Q 018297          326 DAHIHKEVIPSNGALTFGEYTERLLDKYYHLK  357 (358)
Q Consensus       326 ~~~~~~~~~~~~~~~t~ge~~~~~~~~~~~~~  357 (358)
                      .+ +..+.++.|+++++|||+..++.++|..+
T Consensus       286 ~~-~~~~~~~~y~~~~~~e~~~~~~~~~~~~~  316 (320)
T PTZ00273        286 NC-HSEENPPKYPPVRAVDWLLKRFAETYAYR  316 (320)
T ss_pred             cc-cCCCCcccCCceeHHHHHHHHHHHHHHHH
Confidence            55 24456788999999999999999988643

>PLN02485 oxidoreductase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 8e-17
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 3e-15
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-13
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 6e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
 Score = 79.3 bits (196), Expect = 8e-17
 Identities = 40/298 (13%), Positives = 86/298 (28%), Gaps = 38/298 (12%)

Query: 69  NLPEDVKKDLE-DHHSRYNFGWSHGKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERY 127
           ++  + K DL    +++ +         L       ++   Y NP  +       +  + 
Sbjct: 64  SITPEEKWDLAIRAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNP--NFTPDHPRIQAKT 121

Query: 128 PSYCGSNIWP-HSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQIL 186
           P++   N+WP  +  P  +   +     +  +   L     +  +  +  +EN       
Sbjct: 122 PTH-EVNVWPDETKHPGFQDFAEQYYWDVFGLSSALL----KGYALALGKEENFFARHFK 176

Query: 187 LHSRCHKGRLLYYFPAQQSNCIRDGDSMSSW---CGWHTDHASLTGLTCGMFTKDGTVIP 243
                    L+ Y             +         WH D + +T L             
Sbjct: 177 PDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVL------------- 223

Query: 244 CPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASG 303
              +   L + T       +   +       G     L+ +Y  A  H V+    E    
Sbjct: 224 YQSNVQNLQVETA-AGYQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAE---- 278

Query: 304 IDRSTFALFMQPDWDEKLN-FPEDAHIHKEVIPSNGALTFGEYT-ERLLDKY-YHLKT 358
             R +   F+   +D  ++ F                L++G+Y    L+     + +T
Sbjct: 279 --RQSLPFFVNLGYDSVIDPFDP---REPNGKSDREPLSYGDYLQNGLVSLINKNGQT 331
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 91.18
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 86.87
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=2.4e-70  Score=519.18  Aligned_cols=303  Identities=18%  Similarity=0.212  Sum_probs=256.6

Q ss_pred             cceeEEecccccccchHHHHHHHhhhCCCCceEEEEEcCCCCHHHHHHHHHHHhHHhCCChhhhhhhccCCCCCcccccc
Q 018297           12 LRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSH   91 (358)
Q Consensus        12 ~~lp~Idl~~l~~~~~~~~~~l~~A~~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~GY~~   91 (358)
                      .+||+|||+.|.+...+++++|.+||++  ||||||+||||+.++++++++.+++||+||.|+|+++... ....+||.+
T Consensus         5 ~~iPvIDls~~~~~~~~~~~~l~~A~~~--~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~   81 (312)
T 3oox_A            5 SAIDPVSFSLYAKDFTRFAQELGASFER--YGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIP   81 (312)
T ss_dssp             CSSCCEETHHHHHCHHHHHHHHHHHHHH--HSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEEC
T ss_pred             CCCCeEEChHhcccHHHHHHHHHHHHHh--CcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCcccccc
Confidence            4699999999876556789999999999  9999999999999999999999999999999999999765 456899987


Q ss_pred             -CcccccCCCCCCcccceecCCCCCCCCCchhhhhcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018297           92 -GKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYV  170 (358)
Q Consensus        92 -~~e~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~f~~~~~~y~~~~~~la~~Ll~~l~~~~  170 (358)
                       +.|........|++|.|+++  .+.+.+++..     ....+|.||+ .+|+|++++++|+++|.+++..|+++|+   
T Consensus        82 ~g~e~~~~~~~~D~kE~~~~~--~~~~~~~~~~-----~~~~~n~wP~-~~p~fr~~~~~y~~~~~~l~~~ll~~la---  150 (312)
T 3oox_A           82 FGVETAKGADHYDLKEFWHMG--RDLPPGHRFR-----AHMADNVWPA-EIPAFKHDVSWLYNSLDGMGGKVLEAIA---  150 (312)
T ss_dssp             CCCCCSTTSCSCCCCEEEEEC--CCCCTTCGGG-----GTSCCCCCCT-TSTTHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             ccceecCCCCCCCceeeeEee--cCCCcCCcch-----hccCCCCCCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence             55554433456799999997  3444444311     1256899998 7899999999999999999999999999   


Q ss_pred             HhcCCCCchhHHHHHHhccccccceeeccCCCCCCccccCCCCCCCccccccccCccccccccccccCCCccCCCCCCCc
Q 018297          171 SKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAAG  250 (358)
Q Consensus       171 ~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Ypp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~~~~~~~~~~~~~qd~~~G  250 (358)
                       ++||+++++| ++.+.++.+ .+|++||||++.+.    .   .+|+++|||+|+||||+             ||+++|
T Consensus       151 -~~Lgl~~~~f-~~~~~~~~~-~lr~~~Ypp~~~~~----~---~~g~~~HtD~g~lTlL~-------------qd~v~G  207 (312)
T 3oox_A          151 -TYLKLERDFF-KPTVQDGNS-VLRLLHYPPIPKDA----T---GVRAGAHGDINTITLLL-------------GAEEGG  207 (312)
T ss_dssp             -HHTTSCTTTT-HHHHTTCCC-EEEEEEECCCSSCC----C-----CEEEECCCSSEEEEE-------------CCTTSC
T ss_pred             -HHhCcCHHHH-HHHhcCCcc-eeeeEecCCCCCCc----C---CcCccceecCceEEEEe-------------EcCcCc
Confidence             8999986554 546566555 89999999987653    1   48999999999999999             788999


Q ss_pred             eEEEcCCCcEEEeccCCCeEEEEcchhhHhhhCCcccccCCeeeCCCCCCCCCCCceEEEEeEcCCCCCccCCCcccccc
Q 018297          251 LYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWDEKLNFPEDAHIH  330 (358)
Q Consensus       251 LqV~~~~g~W~~V~~~~g~~vVnvGd~l~~~TnG~~~s~~HRV~~~~~~~~~~~~R~S~~~F~~P~~d~~i~~p~~~~~~  330 (358)
                      |||++++|+|++|+|.||++|||+||+||+||||+||||.|||++++.. ....+|||++||++|+.|++|.+++.+ ++
T Consensus       208 LqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~-~~~~~R~Sia~F~~P~~d~~i~pl~~~-v~  285 (312)
T 3oox_A          208 LEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPE-RRGVPRYSTPFFLHFASDYEIKTLQNC-VT  285 (312)
T ss_dssp             EEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGG-GTTSCEEECCEEECCCTTCEECCCGGG-CC
T ss_pred             eEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCcc-CCCCCEEEEEEEecCCCCcEEecCccc-cC
Confidence            9999899999999999999999999999999999999999999877532 124689999999999999999966655 24


Q ss_pred             cccCCCCC-CCCHHHHHHHHHHHH
Q 018297          331 KEVIPSNG-ALTFGEYTERLLDKY  353 (358)
Q Consensus       331 ~~~~~~~~-~~t~ge~~~~~~~~~  353 (358)
                      .+.|++|+ ++|++||+..++++.
T Consensus       286 ~~~p~~y~~~~t~~eyl~~r~~~~  309 (312)
T 3oox_A          286 AENPDRYPESITADEFLQQRLREI  309 (312)
T ss_dssp             SSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred             CCCcccCCCCeeHHHHHHHHHHHh
Confidence            45788999 999999999999865
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 358
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-15
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 9e-08
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

 Score = 74.2 bits (181), Expect = 1e-15
 Identities = 41/334 (12%), Positives = 91/334 (27%), Gaps = 41/334 (12%)

Query: 16  TISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVK 75
           T S +EL+        +  +     GL  L+   +    +  ++   L         + +
Sbjct: 7   TFSLAELQQ--GLHQDEFRRCLRDKGLFYLTDCGLT--DTELKSAKDLVIDFFEHGSEAE 62

Query: 76  -KDLEDHHSRYNFGWSHGKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSN 134
            + +         G++                S     + +  +   + +        + 
Sbjct: 63  KRAVTSPVPTMRRGFTG-------------LESESTAQITNTGSYSDYSMCYSMGTADNL 109

Query: 135 IWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKG 194
                        F         V   +          G++               C   
Sbjct: 110 FPSGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEA-----------FLDCEPL 158

Query: 195 RLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAAGLYIR 254
               YFP    +   +   +      H D + +T +            PC +    L   
Sbjct: 159 LRFRYFPQVPEHRSAEEQPL--RMAPHYDLSMVTLIQ---------QTPCANGFVSLQAE 207

Query: 255 TRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQ 314
                   + +R D +    G    +++   + A  H V APR ++ +G  R++   F++
Sbjct: 208 -VGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLR 266

Query: 315 PDWDEKLNFPEDAHIHKEVIPSNGALTFGEYTER 348
           P+ D   + P       +V       TF ++   
Sbjct: 267 PNADFTFSVPLARECGFDVSLDGETATFQDWIGG 300
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 92.59
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Isopenicillin N synthase
species: Emericella nidulans [TaxId: 162425]

Probab=100.00  E-value=3.4e-62  Score=464.49  Aligned_cols=311  Identities=14%  Similarity=0.123  Sum_probs=239.4

Q ss_pred             CCcceeEEecccccccc----hHHHHHHHhhhCCCCceEEEEEcCCCCHHHHHHHHHHHhHHhCCChhhhhhhccCC-CC
Q 018297           10 PTLRTVTISYSELKDKN----ADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHH-SR   84 (358)
Q Consensus        10 ~~~~lp~Idl~~l~~~~----~~~~~~l~~A~~~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~   84 (358)
                      ..++||+|||+.|.+++    .+++++|.+||++  +|||||+||||+.+++.++.+.  -||.+|.|+|+++.... +.
T Consensus         3 s~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~--~GFf~l~nHGI~~~~i~~~~~~--ff~~l~~eek~~~~~~~~~~   78 (329)
T d1odma_           3 SKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRD--TGFFYAVNHGINVQRLSQKTKE--FHMSITPEEKWDLAIRAYNK   78 (329)
T ss_dssp             CBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHT--TSEEEEESCCCCHHHHHHHHHH--HHHHCCHHHHHHHBCTTTCT
T ss_pred             CCCCCCcEEchhhcCCCHHHHHHHHHHHHHHHHc--CeEEEEEeCCCCHHHHHHHHHH--hcccCCHHHHHhhccccccc
Confidence            45689999999998766    3568999999999  8999999999999988876653  35799999999986532 22


Q ss_pred             CccccccCcccccCCCCCCcccceecCCCCCCCCCchhhhhcCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHHHHH
Q 018297           85 YNFGWSHGKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHS-ALPELEVAFKALGKLIVDVGLMLA  163 (358)
Q Consensus        85 ~~~GY~~~~e~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~-~~~~f~~~~~~y~~~~~~la~~Ll  163 (358)
                      ..+||.........+...+.++.+.++  .+.+.+++......+. +.+|.||+. ..|+|++.+++|+++|.+|+..|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~n~wP~~~~~p~fr~~~~~y~~~~~~la~~ll  155 (329)
T d1odma_          79 EHQDQVRAGYYLSIPGKKAVESFCYLN--PNFTPDHPRIQAKTPT-HEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALL  155 (329)
T ss_dssp             TCTTCSSSEEECCBTTTBCCEEEEECC--TTCCTTSHHHHTTCTT-CCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcccccccccCCCccccceeeecc--cccccccccccccCCc-cccccCccccccchHHHHHHHHHHHhhhhheeeh
Confidence            334444322222222334466666665  3444555544444443 689999973 468999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCchhHHHHHHhc--cccccceeeccCCCCCCcc---ccCCCCCCCccccccccCccccccccccccC
Q 018297          164 YHCDQYVSKGMKMKENEGLEQILLH--SRCHKGRLLYYFPAQQSNC---IRDGDSMSSWCGWHTDHASLTGLTCGMFTKD  238 (358)
Q Consensus       164 ~~l~~~~~~~Lgl~~~~~~~~~~~~--~~~~~lr~~~Ypp~~~~~~---~~~~~~~~~~~~~HtD~~~lTlL~~~~~~~~  238 (358)
                      ++|+    ++||+++++|.. ++..  +.+ .+|+++||+.++...   ........+|+++|||+|+||||+       
T Consensus       156 ~~la----~~Lgl~~~~f~~-~~~~~~~~~-~~~~l~y~~~~~~~~~~~~~~~~~~~~g~~~HtD~g~lTlL~-------  222 (329)
T d1odma_         156 KGYA----LALGKEENFFAR-HFKPDDTLA-SVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLY-------  222 (329)
T ss_dssp             HHHH----HHTTSCTTTTGG-GCCTTTCCC-EEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEE-------
T ss_pred             hhhH----hhcCccHHHHHH-Hhhccccch-hhhccccccCCCCCchhccccccccccccccCCCccccceee-------
Confidence            9999    899998766533 3332  223 678887776543221   111122368999999999999999       


Q ss_pred             CCccCCCCCCCceEEEcCCCcEEEeccCCCeEEEEcchhhHhhhCCcccccCCeeeCCCCCCCCCCCceEEEEeEcCCCC
Q 018297          239 GTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRAPRGEEASGIDRSTFALFMQPDWD  318 (358)
Q Consensus       239 ~~~~~~qd~~~GLqV~~~~g~W~~V~~~~g~~vVnvGd~l~~~TnG~~~s~~HRV~~~~~~~~~~~~R~S~~~F~~P~~d  318 (358)
                            ||+++||||++. |+|++|+|.+|++|||+||+|++||||+||||+|||+.+.      .+|||++||++|+.|
T Consensus       223 ------qd~~~GLqv~~~-~~W~~v~~~~~~~vVN~Gd~l~~~Tng~~kst~HRV~~~~------~~R~Si~~F~~P~~d  289 (329)
T d1odma_         223 ------QSNVQNLQVETA-AGYQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVN------AERQSLPFFVNLGYD  289 (329)
T ss_dssp             ------ECSSCCEEEEET-TEEEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCC------SCEEEEEEEECCCTT
T ss_pred             ------cccceeeeeecc-CCceeeccccceEEEehhhhHHHHhCCEecCCCceecCCC------CCEEEEEEEECCCCC
Confidence                  788999999986 4599999999999999999999999999999999998764      579999999999999


Q ss_pred             CccCCCcccccccccCCCCCCCCHHHHHHHHHHHHcc
Q 018297          319 EKLNFPEDAHIHKEVIPSNGALTFGEYTERLLDKYYH  355 (358)
Q Consensus       319 ~~i~~p~~~~~~~~~~~~~~~~t~ge~~~~~~~~~~~  355 (358)
                      ++|++++.+.  .+.++.|+++|||||+++++.+++.
T Consensus       290 ~~i~pl~~~~--~~~~~~~~~~~~~e~l~~~l~~~~~  324 (329)
T d1odma_         290 SVIDPFDPRE--PNGKSDREPLSYGDYLQNGLVSLIN  324 (329)
T ss_dssp             CBCCCCCTTS--TTCCCSSCCCBHHHHHHHHHHHHHH
T ss_pred             CEEeCCcccC--CCCcccCCCccHHHHHHHHHHHHHH
Confidence            9999655552  2356789999999999999998874
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure