BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018298
(358 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH
Carboxyatractyloside
pdb|2C3E|A Chain A, The Bovine Mitochondrial Adp-Atp Carrier
Length = 297
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 21/301 (6%)
Query: 61 VQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSK-PSILREASRIANEEGFR 119
++ LAGG+A A SKT AP+ R+ +L QVQ ++A + I+ RI E+GF
Sbjct: 8 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67
Query: 120 AFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGM 179
+FW+GNL + P ++NF + YK G+D H++ G + GG AG
Sbjct: 68 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLG--GVDRHKQFWRYFAG-NLASGGAAGA 124
Query: 180 TAASATYPLDLVRTRL-------AAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLL 232
T+ YPLD RTRL AAQR+ + G+ + I + +G GLY+G ++
Sbjct: 125 TSLCFVYPLDFARTRLAADVGKGAAQRE---FTGLGNCITKIFKSDGLRGLYQGFNVSVQ 181
Query: 233 GVGPSIAISFSVYESLRSFWQSYRPNDPTVMVSLACGSLSGIASSTATFPIDLVRRRMQL 292
G+ A F VY++ + P + ++VS + ++P D VRRRM +
Sbjct: 182 GIIIYRAAYFGVYDTAKGMLPD--PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 239
Query: 293 EGAGGRARVYNNGLLGTFRYIIQSEGLRGLYRGILPEYYKVVPGVG--IVFMTYETLKML 350
+ A + G + +R I + EG + ++G + V+ G+G V + Y+ +K
Sbjct: 240 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKG---AWSNVLRGMGGAFVLVLYDEIKKF 296
Query: 351 L 351
+
Sbjct: 297 V 297
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2
Determined By Nmr Molecular Fragment Replacement
Length = 303
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 123/305 (40%), Gaps = 38/305 (12%)
Query: 63 QLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDL----AALSKPSILREASRIANEEGF 118
+ L G A + T PL + Q+QG L A+ +L + EG
Sbjct: 4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGP 63
Query: 119 RAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAG 178
R+ + G + + ++ ++SV Y+ K F + S +G + G G
Sbjct: 64 RSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYT--------KGSEHAGIGSRLLAGSTTG 115
Query: 179 MTAASATYPLDLVRTRLAAQRQA---IYYKGIWHSFQTICREEGFLGLYKGLGATLLGVG 235
A + P D+V+ R AQ +A Y+ +++TI REEG GL+KG +
Sbjct: 116 ALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNA 175
Query: 236 PSIAISFSVYESLRS--FWQSYRPNDPTVMVSLACGSLSGIASSTATFPIDLVRRRMQLE 293
Y+ ++ + +D + A G+ G ++ P+D+V+ R
Sbjct: 176 IVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGA--GFCTTVIASPVDVVKTR---- 229
Query: 294 GAGGRARVYNNGLLGTFR-------YIIQSEGLRGLYRGILPEYYKVVPGVGIVFMTYET 346
Y N LG + +++ EG R Y+G +P + ++ ++F+TYE
Sbjct: 230 --------YMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQ 281
Query: 347 LKMLL 351
LK L
Sbjct: 282 LKRAL 286
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 167 LGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQ---------AIYYKGIWHSFQTICRE 217
+ V F+G G A A T+PLD + RL Q + + Y+G+ + T+ R
Sbjct: 1 MTVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRT 60
Query: 218 EGFLGLYKGLGATLLGVGPSIAISFSVYESLRSFWQSYRPNDPTVMVSLACGSLSGIASS 277
EG LY GL A L ++ +Y+S++ F+ + + L GS +G +
Sbjct: 61 EGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFY-TKGSEHAGIGSRLLAGSTTGALAV 119
Query: 278 TATFPIDLVRRRMQLEGAGGRARVYNNGLLGTFRYIIQSEGLRGLYRGILPEYYKVVPGV 337
P D+V+ R Q + G R Y + + ++ I + EG+RGL++G P +
Sbjct: 120 AVAQPTDVVKVRFQAQARAGGGRRYQS-TVEAYKTIAREEGIRGLWKGTSPNVARNAIVN 178
Query: 338 GIVFMTYETLKMLL 351
+TY+ +K L
Sbjct: 179 CAELVTYDLIKDTL 192
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 82/208 (39%), Gaps = 15/208 (7%)
Query: 54 HQAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASRIA 113
A IG+ +LLAG GA + P + + FQ Q S + IA
Sbjct: 100 EHAGIGS--RLLAGSTTGALAVAVAQPTDVVKVRFQAQARAG--GGRRYQSTVEAYKTIA 155
Query: 114 NEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKN-FLQSVLGLDNHRESASVNLGVHFV 172
EEG R WKG +A + Y+ K+ L++ L D +L HF
Sbjct: 156 REEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTD--------DLPCHFT 207
Query: 173 GGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLL 232
AG P+D+V+TR Y+ H T+ R+EG YKG + L
Sbjct: 208 SAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSA-GHCALTMLRKEGPRAFYKGFMPSFL 266
Query: 233 GVGPSIAISFSVYESL-RSFWQSYRPND 259
+G + F YE L R+ +Y+ +
Sbjct: 267 RLGSWNVVMFVTYEQLKRALMAAYQSRE 294
>pdb|3HW3|A Chain A, The Crystal Structure Of Avian Influenza Virus Pa_n In
Complex With Ump
pdb|3HW3|B Chain B, The Crystal Structure Of Avian Influenza Virus Pa_n In
Complex With Ump
pdb|3HW3|C Chain C, The Crystal Structure Of Avian Influenza Virus Pa_n In
Complex With Ump
pdb|3HW3|D Chain D, The Crystal Structure Of Avian Influenza Virus Pa_n In
Complex With Ump
pdb|3HW5|A Chain A, Crystal Structure Of Avian Influenza Virus Pa_n In Complex
With Amp
pdb|3HW5|B Chain B, Crystal Structure Of Avian Influenza Virus Pa_n In Complex
With Amp
pdb|3HW5|C Chain C, Crystal Structure Of Avian Influenza Virus Pa_n In Complex
With Amp
pdb|3HW5|D Chain D, Crystal Structure Of Avian Influenza Virus Pa_n In Complex
With Amp
pdb|3HW6|A Chain A, Crystal Structure Of Avian Influenza Virus Pa_n In Complex
With Mn
pdb|3HW6|B Chain B, Crystal Structure Of Avian Influenza Virus Pa_n In Complex
With Mn
pdb|3HW6|C Chain C, Crystal Structure Of Avian Influenza Virus Pa_n In Complex
With Mn
pdb|3HW6|D Chain D, Crystal Structure Of Avian Influenza Virus Pa_n In Complex
With Mn
pdb|3HW4|A Chain A, Crystal Structure Of Avian Influenza A Virus In Complex
With Tmp
pdb|3HW4|B Chain B, Crystal Structure Of Avian Influenza A Virus In Complex
With Tmp
pdb|3HW4|C Chain C, Crystal Structure Of Avian Influenza A Virus In Complex
With Tmp
pdb|3HW4|D Chain D, Crystal Structure Of Avian Influenza A Virus In Complex
With Tmp
Length = 261
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 181 AASATYPLD-----LVRTRLAAQRQAIYYKGIWHSFQTICR-EEGFLGLYKGLGATLLGV 234
A A Y LD ++TRL RQ + +G+W SF+ R EE ++ G
Sbjct: 161 ATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEERFEITGTMCRLA 220
Query: 235 GPSIAISFSVYESLRSFWQSYRPN 258
S+ +FS E R++ + PN
Sbjct: 221 DQSLPPNFSSLEKFRAYVDGFEPN 244
>pdb|3EBJ|A Chain A, Crystal Structure Of An Avian Influenza Virus Protein
pdb|3EBJ|B Chain B, Crystal Structure Of An Avian Influenza Virus Protein
pdb|3EBJ|C Chain C, Crystal Structure Of An Avian Influenza Virus Protein
pdb|3EBJ|D Chain D, Crystal Structure Of An Avian Influenza Virus Protein
Length = 259
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 181 AASATYPLD-----LVRTRLAAQRQAIYYKGIWHSFQTICR-EEGFLGLYKGLGATLLGV 234
A A Y LD ++TRL RQ + +G+W SF+ R EE ++ G
Sbjct: 159 ATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEERFEITGTMCRLA 218
Query: 235 GPSIAISFSVYESLRSFWQSYRPN 258
S+ +FS E R++ + PN
Sbjct: 219 DQSLPPNFSSLEKFRAYVDGFEPN 242
>pdb|2I3O|A Chain A, Crystal Structure Of Gamma-Glutamyl Transferase Related
Protein From Thermoplasma Acidophilum
pdb|2I3O|B Chain B, Crystal Structure Of Gamma-Glutamyl Transferase Related
Protein From Thermoplasma Acidophilum
pdb|2I3O|C Chain C, Crystal Structure Of Gamma-Glutamyl Transferase Related
Protein From Thermoplasma Acidophilum
pdb|2I3O|D Chain D, Crystal Structure Of Gamma-Glutamyl Transferase Related
Protein From Thermoplasma Acidophilum
Length = 516
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 100 LSKPSILREASRIANEEGFRAFWKGNLVTI 129
L +P L E+ R+ +EEGFR+F+ G+L I
Sbjct: 183 LKQPD-LAESFRLXSEEGFRSFYDGSLADI 211
>pdb|4EB8|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EB8|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EB8|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4ECE|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|F Chain F, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4GKA|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|F Chain F, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
Length = 324
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 139 NFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMT 180
N Y YE YKN + +L HR ++ G GL G+T
Sbjct: 38 NGYTYEDYKNTAEYLLSHTKHRPQVAI-----ICGSGLGGLT 74
>pdb|4EAR|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EAR|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EAR|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
Length = 324
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 139 NFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMT 180
N Y YE YKN + +L HR ++ G GL G+T
Sbjct: 38 NGYTYEDYKNTAEYLLSHTKHRPQVAI-----ICGSGLGGLT 74
>pdb|3PHB|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|Q Chain Q, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|S Chain S, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|T Chain T, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|U Chain U, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|Y Chain Y, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
Length = 324
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 139 NFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMT 180
N Y YE YKN + +L HR ++ G GL G+T
Sbjct: 38 NGYTYEDYKNTAEWLLSHTKHRPQVAI-----ICGSGLGGLT 74
>pdb|2A0Y|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257d
Mutant
pdb|2OC4|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257d With Imm-H
Length = 289
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 139 NFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMT 180
N Y YE YKN + +L HR ++ G GL G+T
Sbjct: 3 NGYTYEDYKNTAEWLLSHTKHRPQVAI-----ICGSGLGGLT 39
>pdb|2A0W|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257g
Mutant
pdb|2OC9|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257g With Imm-H
Length = 289
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 139 NFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMT 180
N Y YE YKN + +L HR ++ G GL G+T
Sbjct: 3 NGYTYEDYKNTAEWLLSHTKHRPQVAI-----ICGSGLGGLT 39
>pdb|1M73|E Chain E, Crystal Structure Of Human Pnp At 2.3a Resolution
pdb|1RCT|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
Complexed With Inosine
pdb|1V2H|E Chain E, Crystal Structure Of Human Pnp Complexed With Guanine
pdb|1V3Q|E Chain E, Structure Of Human Pnp Complexed With Ddi
pdb|1PWY|E Chain E, Crystal Structure Of Human Pnp Complexed With Acyclovir
pdb|1RFG|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
Complexed With Guanosine
pdb|1V41|E Chain E, Crystal Structure Of Human Pnp Complexed With 8-Azaguanine
pdb|1V45|E Chain E, Crystal Structure Of Human Pnp Complexed With
3-Deoxyguanosine
Length = 288
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 139 NFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMT 180
N Y YE YKN + +L HR ++ G GL G+T
Sbjct: 2 NGYTYEDYKNTAEWLLSHTKHRPQVAI-----ICGSGLGGLT 38
>pdb|2A0X|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257f
Mutant
pdb|2ON6|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257f With Imm-H
Length = 289
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 139 NFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMT 180
N Y YE YKN + +L HR ++ G GL G+T
Sbjct: 3 NGYTYEDYKNTAEWLLSHTKHRPQVAI-----ICGSGLGGLT 39
>pdb|1PF7|E Chain E, Crystal Structure Of Human Pnp Complexed With Immucillin H
pdb|1RR6|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Immucillin-H And Phosphate
pdb|1RSZ|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Dadme-Immucillin-H And Sulfate
pdb|1RT9|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Immucillin-H And Sulfate
pdb|1YRY|E Chain E, Crystal Structure Of Human Pnp Complexed With Mesg
pdb|1ULA|A Chain A, Application Of Crystallographic And Modeling Methods In
The Design Of Purine Nucleoside Phosphorylase Inhibitors
pdb|1ULB|A Chain A, Application Of Crystallographic And Modeling Methods In
The Design Of Purine Nucleoside Phosphorylase Inhibitors
pdb|3BGS|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase With L-
Dadme-Immh And Phosphate
pdb|2Q7O|E Chain E, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With L- Immucillin-H
pdb|3D1V|A Chain A, Crystal Structure Of Human Pnp Complexed With
2-Mercapto(3h) Quinazolinone
pdb|3K8O|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|Q Chain Q, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|S Chain S, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|T Chain T, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|U Chain U, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|Y Chain Y, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8Q|A Chain A, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Serme-Immucillin H
pdb|3INY|A Chain A, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With 7-Deazaguanine
Length = 289
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 139 NFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMT 180
N Y YE YKN + +L HR ++ G GL G+T
Sbjct: 3 NGYTYEDYKNTAEWLLSHTKHRPQVAI-----ICGSGLGGLT 39
>pdb|3GB9|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GGS|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
Length = 311
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 139 NFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMT 180
N Y YE YKN + +L HR ++ G GL G+T
Sbjct: 25 NGYTYEDYKNTAEWLLSHTKHRPQVAI-----ICGSGLGGLT 61
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,875,633
Number of Sequences: 62578
Number of extensions: 389182
Number of successful extensions: 970
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 947
Number of HSP's gapped (non-prelim): 22
length of query: 358
length of database: 14,973,337
effective HSP length: 100
effective length of query: 258
effective length of database: 8,715,537
effective search space: 2248608546
effective search space used: 2248608546
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)