Query 018300
Match_columns 358
No_of_seqs 287 out of 2587
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 07:49:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018300.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018300hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2467 Glycine/serine hydroxy 100.0 2.7E-75 5.9E-80 548.8 20.1 282 76-357 14-304 (477)
2 COG0112 GlyA Glycine/serine hy 100.0 2.3E-70 5E-75 523.0 22.7 263 81-357 5-267 (413)
3 PLN02271 serine hydroxymethylt 100.0 1.4E-63 3E-68 501.8 27.0 279 79-357 125-418 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 1.8E-64 4E-69 496.1 17.4 275 83-357 1-283 (399)
5 PRK13580 serine hydroxymethylt 100.0 2.9E-52 6.2E-57 418.1 24.9 261 81-357 28-322 (493)
6 PLN03226 serine hydroxymethylt 100.0 5E-51 1.1E-55 413.3 25.9 280 78-357 10-297 (475)
7 PTZ00094 serine hydroxymethylt 100.0 8.1E-44 1.7E-48 359.6 26.0 276 79-357 11-286 (452)
8 PRK13034 serine hydroxymethylt 100.0 7.9E-41 1.7E-45 334.5 26.4 266 77-356 3-268 (416)
9 PRK00011 glyA serine hydroxyme 100.0 2.8E-35 6.2E-40 293.7 26.6 262 79-354 2-263 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 4.6E-35 1E-39 290.5 26.2 259 84-354 1-259 (402)
11 COG0520 csdA Selenocysteine ly 99.9 5.4E-24 1.2E-28 211.9 21.0 202 109-329 29-240 (405)
12 COG1104 NifS Cysteine sulfinat 99.9 3.9E-22 8.4E-27 194.0 16.1 200 109-329 8-218 (386)
13 COG0399 WecE Predicted pyridox 99.9 4.8E-21 1E-25 187.4 18.6 200 114-350 13-215 (374)
14 KOG1549 Cysteine desulfurase N 99.9 6.7E-21 1.5E-25 186.2 17.1 198 109-328 50-257 (428)
15 PF00266 Aminotran_5: Aminotra 99.9 1.6E-20 3.4E-25 184.7 19.0 213 108-345 5-226 (371)
16 PF01041 DegT_DnrJ_EryC1: DegT 99.8 3E-20 6.5E-25 182.8 17.3 195 117-348 6-204 (363)
17 PLN02651 cysteine desulfurase 99.8 8.6E-20 1.9E-24 179.3 18.6 200 109-329 6-215 (364)
18 cd06451 AGAT_like Alanine-glyo 99.8 1.6E-19 3.5E-24 176.1 19.8 197 105-329 1-202 (356)
19 PRK11658 UDP-4-amino-4-deoxy-L 99.8 3.5E-19 7.6E-24 176.3 20.2 198 114-347 12-210 (379)
20 PLN02409 serine--glyoxylate am 99.8 3.1E-19 6.8E-24 177.9 19.3 205 104-342 10-224 (401)
21 TIGR03588 PseC UDP-4-keto-6-de 99.8 5.5E-19 1.2E-23 174.6 20.8 173 146-343 31-209 (380)
22 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 4.9E-19 1.1E-23 175.6 19.4 201 105-329 23-236 (387)
23 TIGR03402 FeS_nifS cysteine de 99.8 3.9E-19 8.4E-24 175.2 18.2 200 109-329 6-213 (379)
24 COG0436 Aspartate/tyrosine/aro 99.8 6.5E-19 1.4E-23 175.2 19.7 226 104-349 30-275 (393)
25 cd06453 SufS_like Cysteine des 99.8 9.8E-19 2.1E-23 171.6 19.6 202 109-329 6-216 (373)
26 PRK09295 bifunctional cysteine 99.8 8.3E-19 1.8E-23 174.7 18.8 200 109-329 30-241 (406)
27 PRK10874 cysteine sulfinate de 99.8 1.1E-18 2.4E-23 173.3 19.7 200 109-329 26-237 (401)
28 TIGR01822 2am3keto_CoA 2-amino 99.8 1.4E-18 3.1E-23 171.8 20.1 197 114-342 53-262 (393)
29 TIGR01977 am_tr_V_EF2568 cyste 99.8 1.7E-18 3.6E-23 170.0 20.1 198 113-329 11-215 (376)
30 TIGR01976 am_tr_V_VC1184 cyste 99.8 1.5E-18 3.2E-23 171.8 19.5 201 109-329 24-232 (397)
31 TIGR03392 FeS_syn_CsdA cystein 99.8 1.5E-18 3.3E-23 172.2 19.6 201 109-329 23-234 (398)
32 TIGR03235 DNA_S_dndA cysteine 99.8 1.8E-18 4E-23 168.8 18.8 199 109-329 5-215 (353)
33 PRK08861 cystathionine gamma-s 99.8 6.7E-19 1.5E-23 174.8 15.8 188 133-354 44-238 (388)
34 TIGR01437 selA_rel uncharacter 99.8 2.9E-18 6.3E-23 168.9 19.3 183 111-328 22-223 (363)
35 cd00615 Orn_deC_like Ornithine 99.8 5.1E-19 1.1E-23 169.2 13.3 165 153-329 64-236 (294)
36 TIGR02006 IscS cysteine desulf 99.8 3.3E-18 7.1E-23 170.4 18.9 200 109-329 10-219 (402)
37 PRK08114 cystathionine beta-ly 99.8 1.2E-18 2.5E-23 173.1 15.2 186 134-354 54-248 (395)
38 PLN02855 Bifunctional selenocy 99.8 4E-18 8.6E-23 170.8 19.2 201 109-329 39-250 (424)
39 TIGR02379 ECA_wecE TDP-4-keto- 99.8 6.7E-18 1.4E-22 167.1 20.4 195 114-345 9-208 (376)
40 PRK02948 cysteine desulfurase; 99.8 4.2E-18 9.2E-23 167.9 18.7 199 109-329 7-215 (381)
41 PRK14012 cysteine desulfurase; 99.8 4.8E-18 1E-22 169.2 18.6 200 109-329 10-221 (404)
42 TIGR02326 transamin_PhnW 2-ami 99.8 6.3E-18 1.4E-22 165.7 19.0 198 104-329 4-207 (363)
43 PRK02769 histidine decarboxyla 99.8 2.1E-17 4.5E-22 163.7 22.8 201 114-329 34-247 (380)
44 TIGR01329 cysta_beta_ly_E cyst 99.8 1.9E-18 4.1E-23 171.1 15.4 169 142-343 45-219 (378)
45 cd00616 AHBA_syn 3-amino-5-hyd 99.8 6.6E-18 1.4E-22 164.1 18.8 165 154-343 24-192 (352)
46 TIGR01979 sufS cysteine desulf 99.8 6.6E-18 1.4E-22 167.7 19.2 201 109-329 25-236 (403)
47 COG0075 Serine-pyruvate aminot 99.8 8.4E-18 1.8E-22 164.6 19.3 198 104-329 6-209 (383)
48 PRK05613 O-acetylhomoserine am 99.8 3.7E-18 7.9E-23 171.9 16.8 192 107-328 36-233 (437)
49 PRK08574 cystathionine gamma-s 99.8 4.3E-18 9.2E-23 169.0 17.0 167 142-341 51-223 (385)
50 TIGR01324 cysta_beta_ly_B cyst 99.8 2.7E-18 5.9E-23 169.9 14.9 162 141-329 47-214 (377)
51 PRK13238 tnaA tryptophanase/L- 99.8 6.4E-18 1.4E-22 171.2 17.8 197 117-345 58-286 (460)
52 PRK07811 cystathionine gamma-s 99.8 5.7E-18 1.2E-22 168.3 16.7 168 143-342 60-233 (388)
53 TIGR00474 selA seryl-tRNA(sec) 99.8 1.4E-17 3.1E-22 168.0 19.8 195 111-329 90-303 (454)
54 PRK08134 O-acetylhomoserine am 99.8 4E-18 8.7E-23 171.5 15.5 165 133-326 55-225 (433)
55 PRK08133 O-succinylhomoserine 99.8 6.2E-18 1.3E-22 168.1 16.5 190 109-329 30-225 (390)
56 PRK09028 cystathionine beta-ly 99.8 4.7E-18 1E-22 168.9 15.4 180 142-354 59-245 (394)
57 PRK07810 O-succinylhomoserine 99.8 8.7E-18 1.9E-22 167.7 17.1 167 134-329 62-234 (403)
58 TIGR03403 nifS_epsilon cystein 99.8 2E-17 4.3E-22 163.4 19.0 199 109-329 6-217 (382)
59 PRK04311 selenocysteine syntha 99.8 4.4E-17 9.6E-22 164.9 21.6 195 111-329 95-308 (464)
60 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 3.9E-17 8.5E-22 160.1 20.6 205 105-342 4-224 (361)
61 PLN03032 serine decarboxylase; 99.8 8E-17 1.7E-21 159.0 22.8 200 114-329 35-250 (374)
62 TIGR01328 met_gam_lyase methio 99.8 1.3E-17 2.8E-22 165.9 17.0 167 133-328 50-222 (391)
63 PRK07504 O-succinylhomoserine 99.8 1E-17 2.3E-22 166.9 16.4 168 133-329 56-229 (398)
64 PRK06176 cystathionine gamma-s 99.8 1.2E-17 2.7E-22 165.4 16.6 175 133-342 41-221 (380)
65 PRK07179 hypothetical protein; 99.8 1.1E-16 2.4E-21 159.5 23.4 201 109-342 60-272 (407)
66 cd06454 KBL_like KBL_like; thi 99.8 2.3E-17 5.1E-22 159.8 17.7 195 115-342 17-223 (349)
67 PRK06939 2-amino-3-ketobutyrat 99.8 3.1E-17 6.8E-22 161.9 18.8 198 114-342 57-266 (397)
68 PRK07269 cystathionine gamma-s 99.8 1.8E-17 3.9E-22 163.4 17.0 173 133-342 45-223 (364)
69 PRK08776 cystathionine gamma-s 99.8 2.4E-17 5.3E-22 164.6 17.7 180 142-353 58-244 (405)
70 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 5.3E-17 1.1E-21 160.5 19.6 166 154-344 37-206 (375)
71 cd00614 CGS_like CGS_like: Cys 99.8 2.5E-17 5.4E-22 162.5 16.9 169 142-342 38-212 (369)
72 PRK08064 cystathionine beta-ly 99.7 2.4E-17 5.1E-22 163.9 16.5 169 142-343 52-226 (390)
73 PRK07050 cystathionine beta-ly 99.7 2.8E-17 6.1E-22 163.6 16.7 177 133-343 56-238 (394)
74 COG0626 MetC Cystathionine bet 99.7 2.4E-17 5.2E-22 162.4 15.3 191 132-355 53-251 (396)
75 PRK07503 methionine gamma-lyas 99.7 3.5E-17 7.7E-22 163.4 16.7 167 142-341 63-235 (403)
76 TIGR01325 O_suc_HS_sulf O-succ 99.7 4.4E-17 9.5E-22 161.5 17.2 168 133-329 45-218 (380)
77 PRK08045 cystathionine gamma-s 99.7 2.5E-17 5.4E-22 163.6 15.4 186 134-353 44-236 (386)
78 PRK13479 2-aminoethylphosphona 99.7 1.1E-16 2.4E-21 157.0 19.7 197 105-329 7-209 (368)
79 PRK06767 methionine gamma-lyas 99.7 3.9E-17 8.4E-22 162.2 16.6 167 134-329 53-225 (386)
80 PRK05939 hypothetical protein; 99.7 3.8E-17 8.2E-22 162.8 16.5 158 133-320 38-198 (397)
81 KOG0257 Kynurenine aminotransf 99.7 6.9E-17 1.5E-21 156.6 17.4 253 80-350 9-284 (420)
82 PRK06234 methionine gamma-lyas 99.7 6.8E-17 1.5E-21 161.2 17.2 161 142-329 62-230 (400)
83 TIGR02539 SepCysS Sep-tRNA:Cys 99.7 1.6E-16 3.4E-21 156.7 19.6 193 112-329 18-224 (370)
84 PRK08249 cystathionine gamma-s 99.7 6.4E-17 1.4E-21 161.3 16.8 160 142-328 62-227 (398)
85 PRK06434 cystathionine gamma-l 99.7 2.7E-17 5.9E-22 163.0 13.4 173 133-342 55-233 (384)
86 PRK05968 hypothetical protein; 99.7 6.1E-17 1.3E-21 160.9 15.9 173 134-342 55-233 (389)
87 PRK15407 lipopolysaccharide bi 99.7 2.6E-16 5.6E-21 158.7 20.4 170 146-344 65-246 (438)
88 cd01494 AAT_I Aspartate aminot 99.7 1.9E-16 4.2E-21 136.4 16.8 163 153-327 5-170 (170)
89 PRK07671 cystathionine beta-ly 99.7 1.4E-16 3.1E-21 157.7 18.1 174 134-342 42-221 (377)
90 TIGR02080 O_succ_thio_ly O-suc 99.7 1.1E-16 2.3E-21 158.8 17.0 180 142-353 49-235 (382)
91 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 5.2E-17 1.1E-21 160.9 14.6 177 132-342 45-229 (386)
92 PRK06702 O-acetylhomoserine am 99.7 9.3E-17 2E-21 161.2 16.3 159 142-326 59-223 (432)
93 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 3.8E-16 8.1E-21 151.6 19.8 195 106-329 2-203 (355)
94 PRK08247 cystathionine gamma-s 99.7 1.2E-16 2.7E-21 157.5 16.4 174 133-341 43-222 (366)
95 PLN02509 cystathionine beta-ly 99.7 1.2E-16 2.7E-21 161.7 16.6 160 142-329 131-296 (464)
96 TIGR01788 Glu-decarb-GAD gluta 99.7 4E-16 8.8E-21 156.8 20.2 200 111-329 50-277 (431)
97 TIGR01814 kynureninase kynuren 99.7 1.3E-16 2.8E-21 159.1 16.6 208 105-329 29-248 (406)
98 cd06502 TA_like Low-specificit 99.7 1.5E-16 3.4E-21 153.6 16.5 202 109-342 3-218 (338)
99 PLN03227 serine palmitoyltrans 99.7 3.8E-16 8.3E-21 155.4 19.1 197 109-329 4-224 (392)
100 PLN02242 methionine gamma-lyas 99.7 1.3E-16 2.9E-21 159.9 15.8 162 142-329 74-241 (418)
101 PLN00175 aminotransferase fami 99.7 6.4E-16 1.4E-20 154.7 20.6 230 79-329 32-276 (413)
102 PRK07812 O-acetylhomoserine am 99.7 1.3E-16 2.9E-21 160.5 15.6 160 142-327 67-232 (436)
103 PRK13520 L-tyrosine decarboxyl 99.7 7E-16 1.5E-20 151.0 20.0 220 87-329 4-236 (371)
104 PLN02724 Molybdenum cofactor s 99.7 2.9E-16 6.2E-21 169.2 18.4 214 109-343 41-286 (805)
105 PRK05967 cystathionine beta-ly 99.7 1.2E-16 2.7E-21 158.7 14.4 161 141-328 61-227 (395)
106 COG2873 MET17 O-acetylhomoseri 99.7 1.1E-16 2.4E-21 153.1 13.0 194 104-328 26-225 (426)
107 cd00613 GDC-P Glycine cleavage 99.7 7.3E-16 1.6E-20 152.5 19.1 165 148-329 64-241 (398)
108 PRK12414 putative aminotransfe 99.7 2.9E-15 6.3E-20 148.3 23.2 229 81-329 9-252 (384)
109 PRK08248 O-acetylhomoserine am 99.7 2.9E-16 6.2E-21 158.0 16.0 160 142-328 62-227 (431)
110 PRK06084 O-acetylhomoserine am 99.7 3E-16 6.6E-21 157.6 16.0 166 134-328 50-221 (425)
111 cd00617 Tnase_like Tryptophana 99.7 4.3E-16 9.4E-21 156.4 17.1 173 146-343 55-259 (431)
112 TIGR03576 pyridox_MJ0158 pyrid 99.7 1.1E-15 2.4E-20 149.7 19.4 187 115-343 35-227 (346)
113 PRK04366 glycine dehydrogenase 99.7 1.1E-15 2.5E-20 155.8 20.1 198 109-329 77-292 (481)
114 PRK05994 O-acetylhomoserine am 99.7 4.4E-16 9.5E-21 156.6 16.8 157 143-326 62-224 (427)
115 PLN02414 glycine dehydrogenase 99.7 3.9E-16 8.4E-21 169.0 17.3 162 150-329 570-750 (993)
116 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.3E-16 2.8E-21 158.3 12.5 164 153-330 71-257 (417)
117 COG0156 BioF 7-keto-8-aminopel 99.7 9.3E-16 2E-20 151.2 18.0 197 106-329 42-256 (388)
118 TIGR03540 DapC_direct LL-diami 99.7 8.8E-15 1.9E-19 144.5 24.5 198 113-329 42-254 (383)
119 TIGR00858 bioF 8-amino-7-oxono 99.7 2.2E-15 4.7E-20 146.4 19.8 195 114-341 31-237 (360)
120 PRK13237 tyrosine phenol-lyase 99.7 1E-15 2.3E-20 153.0 17.8 187 140-351 74-294 (460)
121 PRK05957 aspartate aminotransf 99.7 6.4E-15 1.4E-19 146.1 23.3 230 80-329 5-250 (389)
122 PRK06108 aspartate aminotransf 99.7 4E-15 8.8E-20 146.5 21.4 204 103-329 25-249 (382)
123 PRK07550 hypothetical protein; 99.7 9.3E-15 2E-19 144.6 24.0 197 113-329 42-253 (386)
124 PLN02721 threonine aldolase 99.7 1.9E-15 4.2E-20 146.8 18.6 192 113-329 17-223 (353)
125 TIGR03812 tyr_de_CO2_Arch tyro 99.7 5.3E-15 1.2E-19 145.0 21.4 196 111-328 29-241 (373)
126 PRK05958 8-amino-7-oxononanoat 99.7 3.2E-15 7E-20 146.8 19.9 196 114-341 54-259 (385)
127 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 7.3E-16 1.6E-20 154.6 15.4 157 134-319 49-208 (418)
128 PRK05942 aspartate aminotransf 99.7 1.1E-14 2.4E-19 144.6 23.7 197 114-329 49-260 (394)
129 PRK06460 hypothetical protein; 99.7 1.4E-15 3.1E-20 150.5 17.0 168 142-342 43-216 (376)
130 PRK07366 succinyldiaminopimela 99.7 7.3E-15 1.6E-19 145.5 21.9 228 81-329 5-256 (388)
131 PRK07681 aspartate aminotransf 99.7 1.4E-14 3E-19 144.2 23.9 229 81-329 7-256 (399)
132 PRK03080 phosphoserine aminotr 99.7 4.5E-16 9.9E-21 154.1 12.7 192 103-329 12-210 (378)
133 KOG0053 Cystathionine beta-lya 99.7 1.2E-15 2.6E-20 149.3 14.7 175 134-342 69-249 (409)
134 TIGR01825 gly_Cac_T_rel pyrido 99.7 5.3E-15 1.1E-19 145.8 19.6 197 114-342 48-254 (385)
135 PRK08960 hypothetical protein; 99.7 2E-14 4.2E-19 142.4 23.4 227 80-329 6-251 (387)
136 PRK06290 aspartate aminotransf 99.7 2E-14 4.3E-19 143.9 23.2 227 83-329 19-268 (410)
137 PRK09082 methionine aminotrans 99.7 6.2E-15 1.4E-19 146.0 19.4 230 79-329 8-253 (386)
138 PRK06207 aspartate aminotransf 99.7 8.3E-15 1.8E-19 146.2 20.4 198 113-329 53-268 (405)
139 COG1168 MalY Bifunctional PLP- 99.7 6.1E-15 1.3E-19 141.9 18.0 197 111-329 36-249 (388)
140 PLN02483 serine palmitoyltrans 99.6 5.2E-15 1.1E-19 151.3 18.6 206 103-342 101-332 (489)
141 PRK06225 aspartate aminotransf 99.6 1.3E-14 2.7E-19 143.4 20.7 221 84-329 7-242 (380)
142 PRK09276 LL-diaminopimelate am 99.6 2.2E-14 4.8E-19 141.8 22.3 230 81-329 6-256 (385)
143 PRK08361 aspartate aminotransf 99.6 1.5E-14 3.2E-19 143.5 20.7 227 80-329 11-254 (391)
144 PRK07582 cystathionine gamma-l 99.6 2.3E-15 5.1E-20 148.4 14.6 164 143-342 50-219 (366)
145 PRK07777 aminotransferase; Val 99.6 3.1E-14 6.8E-19 140.9 22.5 227 82-329 5-249 (387)
146 PRK05355 3-phosphoserine/phosp 99.6 3.1E-15 6.8E-20 147.3 14.0 202 104-329 4-211 (360)
147 PRK08912 hypothetical protein; 99.6 3.5E-14 7.5E-19 140.6 21.5 228 81-329 6-249 (387)
148 PRK07337 aminotransferase; Val 99.6 4.8E-14 1E-18 139.6 22.3 226 81-329 5-249 (388)
149 PRK08068 transaminase; Reviewe 99.6 5.2E-14 1.1E-18 139.5 22.6 229 82-329 8-257 (389)
150 PRK07309 aromatic amino acid a 99.6 3.9E-14 8.5E-19 140.6 21.6 231 80-329 8-254 (391)
151 TIGR02618 tyr_phenol_ly tyrosi 99.6 3.7E-15 8E-20 148.7 13.9 183 140-348 67-284 (450)
152 PLN02955 8-amino-7-oxononanoat 99.6 1.1E-14 2.4E-19 146.9 17.2 208 104-342 103-340 (476)
153 PRK13355 bifunctional HTH-doma 99.6 3.4E-14 7.3E-19 146.3 21.0 225 79-327 119-368 (517)
154 PRK07324 transaminase; Validat 99.6 2.2E-14 4.9E-19 141.6 18.8 166 155-342 69-246 (373)
155 TIGR03531 selenium_SpcS O-phos 99.6 1.9E-14 4.1E-19 144.7 18.3 183 146-343 103-298 (444)
156 PRK08363 alanine aminotransfer 99.6 5.7E-14 1.2E-18 139.6 21.5 191 113-326 46-251 (398)
157 cd06450 DOPA_deC_like DOPA dec 99.6 2.3E-15 4.9E-20 146.0 11.1 171 144-327 34-230 (345)
158 PRK13392 5-aminolevulinate syn 99.6 1.7E-14 3.6E-19 144.1 17.6 194 108-328 51-261 (410)
159 PRK14807 histidinol-phosphate 99.6 2.6E-14 5.7E-19 139.8 18.2 196 113-342 35-237 (351)
160 PRK06348 aspartate aminotransf 99.6 7.7E-14 1.7E-18 138.1 21.7 230 77-329 4-251 (384)
161 TIGR03537 DapC succinyldiamino 99.6 7.2E-14 1.6E-18 136.6 21.2 195 113-328 13-222 (350)
162 KOG2862 Alanine-glyoxylate ami 99.6 2.7E-14 5.8E-19 133.9 17.0 195 106-328 20-220 (385)
163 PRK15029 arginine decarboxylas 99.6 8.9E-15 1.9E-19 154.7 15.4 164 152-329 209-402 (755)
164 PLN02822 serine palmitoyltrans 99.6 3.5E-14 7.6E-19 144.9 19.3 189 114-329 124-330 (481)
165 PF01212 Beta_elim_lyase: Beta 99.6 2.6E-15 5.7E-20 143.5 10.2 194 109-329 3-210 (290)
166 TIGR01821 5aminolev_synth 5-am 99.6 3.7E-14 8.1E-19 141.1 18.4 203 106-341 48-267 (402)
167 PRK09147 succinyldiaminopimela 99.6 1.3E-13 2.8E-18 136.9 22.2 224 83-329 5-262 (396)
168 PRK13393 5-aminolevulinate syn 99.6 6.4E-14 1.4E-18 139.8 19.5 196 106-328 48-260 (406)
169 PRK07049 methionine gamma-lyas 99.6 3.9E-14 8.5E-19 142.5 18.0 169 143-342 82-266 (427)
170 PF06838 Met_gamma_lyase: Meth 99.6 1.9E-14 4.2E-19 138.1 14.8 200 117-348 28-254 (403)
171 PRK05764 aspartate aminotransf 99.6 1.9E-13 4.1E-18 135.3 22.6 226 80-328 5-254 (393)
172 PRK09064 5-aminolevulinate syn 99.6 6.8E-14 1.5E-18 139.4 19.3 196 106-328 49-261 (407)
173 TIGR01141 hisC histidinol-phos 99.6 2.8E-14 6.1E-19 138.7 15.8 196 112-343 31-235 (346)
174 PRK08636 aspartate aminotransf 99.6 3E-13 6.5E-18 134.8 23.2 231 81-329 8-265 (403)
175 cd00611 PSAT_like Phosphoserin 99.6 8.9E-15 1.9E-19 143.6 11.9 196 105-329 1-208 (355)
176 PLN00145 tyrosine/nicotianamin 99.6 1.9E-13 4.1E-18 137.6 21.7 196 112-327 68-277 (430)
177 PRK07683 aminotransferase A; V 99.6 1.5E-13 3.3E-18 136.2 20.7 194 113-329 41-250 (387)
178 PRK10534 L-threonine aldolase; 99.6 4.1E-14 9E-19 137.0 16.1 192 113-329 11-212 (333)
179 TIGR01364 serC_1 phosphoserine 99.6 2E-14 4.4E-19 141.0 13.9 194 113-329 2-200 (349)
180 PRK05937 8-amino-7-oxononanoat 99.6 1.3E-13 2.9E-18 135.9 19.8 195 108-328 9-225 (370)
181 PRK08175 aminotransferase; Val 99.6 4.8E-13 1E-17 132.9 23.7 196 114-329 43-254 (395)
182 PLN02656 tyrosine transaminase 99.6 2.5E-13 5.4E-18 135.7 21.5 194 112-327 47-256 (409)
183 PLN02368 alanine transaminase 99.6 1.7E-13 3.8E-18 137.0 20.3 166 148-326 111-306 (407)
184 TIGR03538 DapC_gpp succinyldia 99.6 2.4E-13 5.3E-18 134.9 21.2 225 85-329 6-261 (393)
185 PRK06107 aspartate aminotransf 99.6 2.8E-13 6E-18 135.0 21.3 196 113-329 46-258 (402)
186 PRK07682 hypothetical protein; 99.6 2.7E-13 5.8E-18 133.7 20.5 207 103-329 21-243 (378)
187 PRK06855 aminotransferase; Val 99.6 2.9E-13 6.3E-18 136.4 20.9 197 112-327 47-258 (433)
188 PRK09148 aminotransferase; Val 99.6 6.1E-13 1.3E-17 132.8 23.0 229 82-329 6-255 (405)
189 TIGR03799 NOD_PanD_pyr putativ 99.6 2.4E-13 5.3E-18 139.6 19.8 175 144-329 125-349 (522)
190 PRK09265 aminotransferase AlaT 99.6 7.7E-13 1.7E-17 131.8 22.7 190 114-327 50-255 (404)
191 TIGR00461 gcvP glycine dehydro 99.5 8.5E-14 1.8E-18 149.5 16.6 165 147-329 529-712 (939)
192 PLN02187 rooty/superroot1 99.5 4E-13 8.7E-18 136.5 20.7 194 113-328 83-292 (462)
193 PRK12566 glycine dehydrogenase 99.5 6.9E-14 1.5E-18 149.5 15.7 156 147-321 543-711 (954)
194 COG0076 GadB Glutamate decarbo 99.5 2.1E-13 4.6E-18 137.9 18.5 201 109-329 69-292 (460)
195 PLN03026 histidinol-phosphate 99.5 1.8E-13 3.8E-18 135.6 17.5 204 103-343 53-265 (380)
196 COG2008 GLY1 Threonine aldolas 99.5 1.5E-13 3.3E-18 131.7 16.4 196 109-329 5-215 (342)
197 PTZ00433 tyrosine aminotransfe 99.5 3.7E-13 8E-18 134.6 19.4 192 113-326 50-263 (412)
198 PLN00143 tyrosine/nicotianamin 99.5 7.7E-13 1.7E-17 132.3 21.1 194 112-327 48-257 (409)
199 cd00609 AAT_like Aspartate ami 99.5 1.1E-12 2.4E-17 126.0 21.3 178 146-342 38-229 (350)
200 PTZ00377 alanine aminotransfer 99.5 8.9E-13 1.9E-17 134.6 21.4 196 112-326 87-314 (481)
201 PRK05367 glycine dehydrogenase 99.5 9.4E-14 2E-18 150.9 15.0 165 147-329 541-724 (954)
202 PRK03321 putative aminotransfe 99.5 1.4E-13 3.1E-18 134.3 14.7 194 114-343 36-241 (352)
203 PRK04870 histidinol-phosphate 99.5 2.3E-13 5.1E-18 133.1 16.2 207 104-343 28-242 (356)
204 PLN02231 alanine transaminase 99.5 6.7E-13 1.4E-17 137.0 19.6 203 105-326 132-366 (534)
205 PRK02731 histidinol-phosphate 99.5 4.3E-13 9.2E-18 131.6 16.7 203 103-342 33-249 (367)
206 PRK07568 aspartate aminotransf 99.5 2.9E-12 6.2E-17 127.0 22.7 192 113-329 43-252 (397)
207 PRK03317 histidinol-phosphate 99.5 5.7E-13 1.2E-17 131.0 17.4 208 105-342 29-252 (368)
208 PLN02880 tyrosine decarboxylas 99.5 4.3E-13 9.2E-18 137.1 16.8 175 145-329 119-323 (490)
209 TIGR01265 tyr_nico_aTase tyros 99.5 3.3E-12 7.1E-17 127.4 22.4 191 112-328 47-257 (403)
210 PRK00451 glycine dehydrogenase 99.5 6E-13 1.3E-17 134.3 17.2 158 153-329 117-285 (447)
211 PLN02376 1-aminocyclopropane-1 99.5 7.1E-13 1.5E-17 135.8 17.6 167 148-329 98-296 (496)
212 PRK00950 histidinol-phosphate 99.5 3.9E-13 8.5E-18 131.5 15.0 201 105-342 37-247 (361)
213 TIGR01264 tyr_amTase_E tyrosin 99.5 1.5E-12 3.3E-17 129.6 19.3 194 112-328 47-256 (401)
214 PRK13578 ornithine decarboxyla 99.5 1.2E-13 2.5E-18 145.1 11.7 164 152-329 178-371 (720)
215 COG1003 GcvP Glycine cleavage 99.5 3.9E-13 8.4E-18 131.1 13.8 154 149-321 110-274 (496)
216 PRK07865 N-succinyldiaminopime 99.5 2.7E-12 5.8E-17 126.1 19.8 215 79-329 3-240 (364)
217 PRK03158 histidinol-phosphate 99.5 9E-13 1.9E-17 129.0 15.7 193 114-343 43-247 (359)
218 PLN02450 1-aminocyclopropane-1 99.5 1.9E-12 4E-17 131.9 18.3 167 148-329 90-289 (468)
219 PRK05387 histidinol-phosphate 99.5 1.1E-12 2.5E-17 127.8 15.7 200 103-342 25-234 (353)
220 PRK15481 transcriptional regul 99.5 2.6E-12 5.6E-17 129.2 18.6 144 171-329 143-298 (431)
221 PLN02263 serine decarboxylase 99.5 9.1E-12 2E-16 125.6 22.4 170 146-329 131-317 (470)
222 PRK08153 histidinol-phosphate 99.5 2.8E-12 6.1E-17 126.4 18.1 200 106-342 36-247 (369)
223 PRK05166 histidinol-phosphate 99.5 2E-12 4.4E-17 127.4 17.0 203 105-342 39-256 (371)
224 PRK06836 aspartate aminotransf 99.5 3.6E-12 7.8E-17 126.7 18.5 195 113-329 46-261 (394)
225 TIGR01366 serC_3 phosphoserine 99.5 4.9E-13 1.1E-17 131.8 12.1 193 104-328 4-200 (361)
226 PRK09105 putative aminotransfe 99.4 3E-12 6.5E-17 126.4 17.4 190 113-342 56-257 (370)
227 PRK02610 histidinol-phosphate 99.4 3.6E-12 7.8E-17 125.8 17.8 202 113-343 41-259 (374)
228 COG1167 ARO8 Transcriptional r 99.4 2.7E-12 5.8E-17 130.4 16.9 167 148-329 136-315 (459)
229 PRK01533 histidinol-phosphate 99.4 2.2E-12 4.8E-17 127.2 15.9 203 103-343 30-247 (366)
230 PRK14809 histidinol-phosphate 99.4 4.9E-12 1.1E-16 123.9 18.0 204 104-343 32-247 (357)
231 PRK05839 hypothetical protein; 99.4 1.1E-11 2.3E-16 122.5 20.5 189 113-328 37-248 (374)
232 PRK08056 threonine-phosphate d 99.4 4.1E-12 8.8E-17 124.6 17.1 201 105-342 23-237 (356)
233 PRK09257 aromatic amino acid a 99.4 2.8E-12 6.1E-17 127.5 16.2 225 83-326 5-260 (396)
234 KOG1360 5-aminolevulinate synt 99.4 1.9E-12 4.2E-17 124.9 13.3 207 103-342 171-394 (570)
235 TIGR03539 DapC_actino succinyl 99.4 1.1E-11 2.4E-16 121.6 19.0 192 103-328 22-233 (357)
236 PF00282 Pyridoxal_deC: Pyrido 99.4 9E-12 1.9E-16 123.3 18.1 177 142-329 73-278 (373)
237 COG1103 Archaea-specific pyrid 99.4 1.2E-11 2.6E-16 114.3 17.5 201 105-340 20-239 (382)
238 PRK07590 L,L-diaminopimelate a 99.4 1.4E-11 3.1E-16 123.0 19.3 199 104-329 36-266 (409)
239 PLN02672 methionine S-methyltr 99.4 7.1E-12 1.5E-16 136.6 17.7 210 105-342 700-935 (1082)
240 PLN02452 phosphoserine transam 99.4 3.8E-12 8.2E-17 125.6 14.1 204 103-329 7-215 (365)
241 KOG0259 Tyrosine aminotransfer 99.4 1.9E-11 4.1E-16 117.6 18.2 198 111-329 76-288 (447)
242 PF00155 Aminotran_1_2: Aminot 99.4 8.7E-12 1.9E-16 121.7 15.5 157 171-343 70-246 (363)
243 PRK09275 aspartate aminotransf 99.4 9.3E-12 2E-16 127.8 16.3 147 171-329 163-328 (527)
244 PLN02590 probable tyrosine dec 99.4 2.3E-11 5E-16 125.2 18.9 178 144-329 166-371 (539)
245 TIGR03801 asp_4_decarbox aspar 99.4 1.2E-11 2.5E-16 126.9 16.0 170 148-329 133-327 (521)
246 COG1921 SelA Selenocysteine sy 99.4 3.3E-11 7.2E-16 117.7 17.9 196 110-329 35-238 (395)
247 PLN02397 aspartate transaminas 99.4 1.8E-11 4E-16 123.0 16.6 139 176-325 126-282 (423)
248 PRK03967 histidinol-phosphate 99.4 2.1E-11 4.6E-16 118.7 16.5 192 113-343 31-229 (337)
249 PRK04781 histidinol-phosphate 99.4 1.5E-11 3.2E-16 121.2 15.3 171 153-344 64-246 (364)
250 PLN02607 1-aminocyclopropane-1 99.4 3.6E-11 7.9E-16 121.7 18.4 167 148-329 99-296 (447)
251 PTZ00376 aspartate aminotransf 99.4 1.3E-11 2.7E-16 123.2 14.8 141 174-325 103-264 (404)
252 KOG1359 Glycine C-acetyltransf 99.4 2.6E-12 5.6E-17 119.8 9.0 208 103-345 67-288 (417)
253 PRK15400 lysine decarboxylase 99.3 8.9E-12 1.9E-16 131.0 12.8 161 152-328 199-382 (714)
254 PRK15399 lysine decarboxylase 99.3 1.6E-11 3.4E-16 129.1 14.1 161 152-329 199-383 (713)
255 PRK07392 threonine-phosphate d 99.3 8.6E-11 1.9E-15 115.3 18.2 201 105-343 25-241 (360)
256 PRK06358 threonine-phosphate d 99.3 4.9E-11 1.1E-15 117.0 16.1 202 105-343 22-239 (354)
257 PF03841 SelA: L-seryl-tRNA se 99.3 2.7E-12 5.9E-17 124.4 6.8 188 112-329 16-228 (367)
258 COG1982 LdcC Arginine/lysine/o 99.3 1.3E-11 2.7E-16 125.5 11.8 161 153-328 75-247 (557)
259 PRK04635 histidinol-phosphate 99.3 1.8E-11 3.9E-16 119.9 11.1 164 154-342 66-238 (354)
260 PRK01688 histidinol-phosphate 99.3 2.4E-11 5.2E-16 119.0 10.6 167 153-343 62-238 (351)
261 PRK07505 hypothetical protein; 99.2 4.7E-10 1E-14 111.9 19.3 196 115-342 62-273 (402)
262 TIGR02617 tnaA_trp_ase tryptop 99.2 2.6E-10 5.7E-15 113.5 16.6 193 113-329 54-281 (467)
263 TIGR03542 DAPAT_plant LL-diami 99.2 6.4E-10 1.4E-14 110.9 19.6 198 105-329 36-263 (402)
264 TIGR01140 L_thr_O3P_dcar L-thr 99.2 9.3E-11 2E-15 113.8 13.2 158 153-343 52-219 (330)
265 PRK12462 phosphoserine aminotr 99.2 1.7E-10 3.6E-15 113.4 15.0 205 102-329 3-213 (364)
266 KOG1368 Threonine aldolase [Am 99.2 7.8E-11 1.7E-15 110.2 11.4 189 114-331 34-242 (384)
267 TIGR01365 serC_2 phosphoserine 99.2 1E-10 2.3E-15 115.6 12.9 190 107-329 7-201 (374)
268 PRK01278 argD acetylornithine 99.2 3.2E-10 6.8E-15 112.5 16.1 190 114-328 48-259 (389)
269 PRK08354 putative aminotransfe 99.2 4.6E-10 9.9E-15 108.1 16.2 176 105-326 11-196 (311)
270 PRK08637 hypothetical protein; 99.2 1E-09 2.2E-14 108.9 19.1 146 171-327 71-242 (388)
271 cd00610 OAT_like Acetyl ornith 99.2 3.5E-10 7.7E-15 112.4 15.8 200 114-340 53-281 (413)
272 PRK07908 hypothetical protein; 99.2 1E-09 2.3E-14 107.1 18.5 196 103-342 23-228 (349)
273 COG0079 HisC Histidinol-phosph 99.2 7.4E-10 1.6E-14 109.0 17.4 206 104-347 24-241 (356)
274 PRK00854 rocD ornithine--oxo-a 99.2 1.3E-09 2.9E-14 108.4 18.7 185 114-329 58-273 (401)
275 COG4100 Cystathionine beta-lya 99.2 3E-10 6.5E-15 106.5 12.7 168 147-329 68-251 (416)
276 PLN02414 glycine dehydrogenase 99.2 4.2E-10 9.1E-15 122.5 15.0 188 112-329 115-315 (993)
277 COG3844 Kynureninase [Amino ac 99.2 7.5E-10 1.6E-14 104.9 14.3 194 114-329 43-245 (407)
278 PRK09440 avtA valine--pyruvate 99.1 1.6E-09 3.5E-14 108.3 17.1 170 148-329 78-265 (416)
279 TIGR00707 argD acetylornithine 99.1 1.7E-09 3.6E-14 106.5 16.3 198 114-342 44-262 (379)
280 PRK06425 histidinol-phosphate 99.1 7.3E-10 1.6E-14 107.7 12.8 160 153-342 45-217 (332)
281 PTZ00125 ornithine aminotransf 99.1 3.5E-09 7.6E-14 105.1 17.8 199 114-342 48-271 (400)
282 PRK14808 histidinol-phosphate 99.1 2.3E-09 4.9E-14 104.5 15.4 196 103-343 20-227 (335)
283 PRK04073 rocD ornithine--oxo-a 99.1 4.7E-09 1E-13 104.5 17.1 196 114-341 57-278 (396)
284 PRK05367 glycine dehydrogenase 99.1 3.7E-09 8E-14 115.4 17.6 150 153-328 126-286 (954)
285 PRK05664 threonine-phosphate d 99.0 4.3E-09 9.3E-14 102.3 14.7 153 154-343 55-217 (330)
286 PRK03244 argD acetylornithine 99.0 1.3E-08 2.9E-13 101.1 18.4 199 115-341 61-274 (398)
287 TIGR03811 tyr_de_CO2_Ent tyros 99.0 2.3E-08 4.9E-13 104.4 20.5 173 144-329 119-399 (608)
288 KOG1357 Serine palmitoyltransf 99.0 2.5E-09 5.4E-14 105.1 12.3 186 113-329 155-361 (519)
289 PRK02627 acetylornithine amino 99.0 5.8E-09 1.3E-13 103.3 15.3 196 115-341 57-273 (396)
290 TIGR03246 arg_catab_astC succi 99.0 1.8E-08 3.9E-13 100.5 17.3 196 114-341 52-270 (397)
291 PRK02936 argD acetylornithine 99.0 1E-08 2.3E-13 101.1 15.2 198 114-342 46-259 (377)
292 PRK05093 argD bifunctional N-s 99.0 3.2E-08 6.9E-13 98.8 17.7 191 114-342 57-276 (403)
293 TIGR01885 Orn_aminotrans ornit 98.9 4.8E-08 1.1E-12 97.3 18.4 193 114-342 54-279 (401)
294 TIGR00713 hemL glutamate-1-sem 98.9 6.6E-08 1.4E-12 97.1 16.1 196 113-341 64-285 (423)
295 COG0001 HemL Glutamate-1-semia 98.8 1.7E-07 3.6E-12 93.0 17.0 199 115-343 71-292 (432)
296 PRK06959 putative threonine-ph 98.8 5.9E-08 1.3E-12 94.8 13.8 156 153-343 58-223 (339)
297 PRK12381 bifunctional succinyl 98.8 6.1E-08 1.3E-12 97.0 14.1 198 114-342 56-275 (406)
298 PRK03715 argD acetylornithine 98.8 1.4E-07 3.1E-12 94.1 15.9 190 115-329 54-264 (395)
299 KOG0256 1-aminocyclopropane-1- 98.8 2.9E-07 6.2E-12 89.9 16.4 165 171-350 149-336 (471)
300 PRK08117 4-aminobutyrate amino 98.8 2.2E-07 4.8E-12 93.8 16.3 195 113-328 59-291 (433)
301 KOG2040 Glycine dehydrogenase 98.7 1.1E-07 2.3E-12 97.1 13.0 151 153-321 587-750 (1001)
302 PLN02624 ornithine-delta-amino 98.7 5.1E-07 1.1E-11 92.3 18.0 191 114-328 92-309 (474)
303 PRK04013 argD acetylornithine/ 98.7 3.9E-07 8.5E-12 90.0 16.2 188 114-328 41-245 (364)
304 PRK04260 acetylornithine amino 98.7 7.4E-07 1.6E-11 88.0 17.2 153 171-341 87-256 (375)
305 COG4992 ArgD Ornithine/acetylo 98.7 6.5E-07 1.4E-11 88.1 16.2 191 114-328 59-268 (404)
306 PRK12403 putative aminotransfe 98.7 2E-06 4.3E-11 87.6 19.3 201 113-341 70-314 (460)
307 COG1448 TyrB Aspartate/tyrosin 98.6 1.2E-06 2.6E-11 85.2 16.2 216 90-326 13-261 (396)
308 PLN00144 acetylornithine trans 98.6 8.5E-07 1.8E-11 88.2 15.7 199 113-341 31-258 (382)
309 PF02347 GDC-P: Glycine cleava 98.6 3.1E-07 6.8E-12 91.8 12.4 152 153-329 115-278 (429)
310 PRK00062 glutamate-1-semialdeh 98.6 7.2E-07 1.6E-11 89.9 14.2 200 113-341 66-287 (426)
311 PRK07046 aminotransferase; Val 98.6 3.1E-06 6.8E-11 86.0 18.7 197 114-341 92-307 (453)
312 PRK04612 argD acetylornithine 98.6 1.9E-06 4.1E-11 86.5 16.0 194 113-328 56-271 (408)
313 PRK00615 glutamate-1-semialdeh 98.5 5.1E-06 1.1E-10 84.0 18.4 201 113-341 69-291 (433)
314 PRK08088 4-aminobutyrate amino 98.5 4.9E-06 1.1E-10 83.8 17.8 204 114-342 58-291 (425)
315 PRK05964 adenosylmethionine--8 98.5 2.5E-06 5.4E-11 85.8 15.3 200 114-341 59-292 (423)
316 PLN02760 4-aminobutyrate:pyruv 98.5 4.7E-06 1E-10 85.8 17.2 203 113-341 105-352 (504)
317 TIGR00461 gcvP glycine dehydro 98.5 5E-06 1.1E-10 90.3 17.4 151 153-329 114-275 (939)
318 COG3977 Alanine-alpha-ketoisov 98.5 1E-05 2.2E-10 76.5 17.1 212 103-329 30-265 (417)
319 PLN02482 glutamate-1-semialdeh 98.5 1.6E-05 3.5E-10 81.3 20.1 198 114-341 116-336 (474)
320 TIGR03372 putres_am_tran putre 98.5 8.3E-06 1.8E-10 82.7 17.8 200 113-340 91-315 (442)
321 PRK08360 4-aminobutyrate amino 98.5 1.2E-05 2.7E-10 81.5 18.9 202 113-341 57-295 (443)
322 PRK08593 4-aminobutyrate amino 98.4 7.8E-06 1.7E-10 83.0 17.0 202 114-341 59-298 (445)
323 PRK11522 putrescine--2-oxoglut 98.4 1E-05 2.2E-10 82.5 17.8 192 114-328 99-316 (459)
324 PRK07495 4-aminobutyrate amino 98.4 1.3E-05 2.9E-10 80.8 18.4 195 113-328 56-282 (425)
325 COG0403 GcvP Glycine cleavage 98.4 1.3E-05 2.9E-10 78.9 17.1 156 153-329 125-292 (450)
326 PRK06058 4-aminobutyrate amino 98.4 1.9E-05 4.1E-10 80.1 18.9 196 113-328 72-303 (443)
327 PRK06105 aminotransferase; Pro 98.4 2.3E-05 5.1E-10 79.8 19.2 202 113-341 64-310 (460)
328 PRK09792 4-aminobutyrate trans 98.4 2E-05 4.4E-10 79.4 18.4 195 113-328 56-282 (421)
329 PRK05769 4-aminobutyrate amino 98.4 1.3E-05 2.8E-10 81.3 16.7 196 114-329 71-306 (441)
330 PRK13360 omega amino acid--pyr 98.4 2.3E-05 5E-10 79.5 18.5 202 113-341 62-307 (442)
331 PRK09264 diaminobutyrate--2-ox 98.4 9.9E-06 2.1E-10 81.7 15.7 145 175-329 110-284 (425)
332 KOG0258 Alanine aminotransfera 98.3 8.6E-06 1.9E-10 79.3 13.5 165 148-324 117-309 (475)
333 COG0160 GabT 4-aminobutyrate a 98.3 5.1E-05 1.1E-09 76.5 19.6 201 113-329 72-307 (447)
334 PRK06209 glutamate-1-semialdeh 98.3 1.7E-05 3.7E-10 80.1 16.2 185 114-328 65-266 (431)
335 KOG1358 Serine palmitoyltransf 98.3 4.8E-06 1E-10 81.0 11.4 195 104-326 96-315 (467)
336 PRK06541 hypothetical protein; 98.3 3.2E-05 6.9E-10 78.9 17.9 86 241-328 208-306 (460)
337 PRK06777 4-aminobutyrate amino 98.3 4.4E-05 9.6E-10 76.9 18.4 202 113-341 56-289 (421)
338 TIGR00700 GABAtrnsam 4-aminobu 98.3 4.7E-05 1E-09 76.6 18.6 203 113-341 49-288 (420)
339 KOG1383 Glutamate decarboxylas 98.3 9.9E-06 2.1E-10 80.4 13.0 226 84-329 59-305 (491)
340 PRK06062 hypothetical protein; 98.3 3.7E-05 8.1E-10 78.2 17.4 200 113-341 69-306 (451)
341 PRK07986 adenosylmethionine--8 98.3 1.8E-05 3.9E-10 80.0 14.9 203 113-342 59-298 (428)
342 PRK09221 beta alanine--pyruvat 98.3 3.6E-05 7.8E-10 78.1 17.2 201 113-340 65-309 (445)
343 TIGR02407 ectoine_ectB diamino 98.3 3E-05 6.4E-10 77.9 16.4 198 113-329 51-280 (412)
344 PRK12389 glutamate-1-semialdeh 98.3 5.5E-05 1.2E-09 76.4 18.2 196 114-341 70-290 (428)
345 KOG0634 Aromatic amino acid am 98.2 2.1E-05 4.6E-10 77.5 13.7 150 165-329 122-311 (472)
346 TIGR00508 bioA adenosylmethion 98.2 3.8E-05 8.1E-10 77.6 15.7 203 113-342 61-301 (427)
347 PRK06918 4-aminobutyrate amino 98.2 8.4E-05 1.8E-09 75.5 16.8 202 113-341 70-310 (451)
348 PRK06149 hypothetical protein; 98.1 0.00022 4.8E-09 79.1 21.1 205 114-341 600-836 (972)
349 PRK07480 putative aminotransfe 98.1 0.00014 3.1E-09 74.1 18.0 91 241-340 206-310 (456)
350 PRK06943 adenosylmethionine--8 98.1 0.00018 4E-09 73.2 18.4 202 113-341 70-314 (453)
351 PRK05630 adenosylmethionine--8 98.1 9.9E-05 2.1E-09 74.5 16.3 91 241-341 191-293 (422)
352 PRK07482 hypothetical protein; 98.1 0.00019 4E-09 73.3 18.3 203 113-341 66-312 (461)
353 PRK05965 hypothetical protein; 98.1 0.00016 3.5E-09 73.7 17.4 203 113-341 62-307 (459)
354 PRK07678 aminotransferase; Val 98.1 0.00016 3.5E-09 73.6 17.0 199 113-341 63-305 (451)
355 PRK06173 adenosylmethionine--8 98.1 0.00014 3.1E-09 73.5 16.2 202 113-341 60-299 (429)
356 PRK06916 adenosylmethionine--8 98.1 0.00011 2.4E-09 74.9 15.5 202 113-341 72-316 (460)
357 PF05889 SLA_LP_auto_ag: Solub 98.1 6.5E-06 1.4E-10 80.9 6.2 163 157-329 65-238 (389)
358 KOG0629 Glutamate decarboxylas 98.1 2.8E-05 6E-10 76.6 10.4 171 149-329 142-337 (510)
359 PRK05639 4-aminobutyrate amino 98.0 0.00016 3.4E-09 73.8 16.0 196 113-329 69-307 (457)
360 PRK06917 hypothetical protein; 98.0 0.00033 7.2E-09 71.2 17.5 202 113-341 47-292 (447)
361 PRK06148 hypothetical protein; 98.0 0.00041 8.9E-09 77.2 19.5 201 114-342 639-877 (1013)
362 PRK07481 hypothetical protein; 97.9 0.00089 1.9E-08 68.1 19.3 82 251-341 213-305 (449)
363 PRK06082 4-aminobutyrate amino 97.9 0.00075 1.6E-08 68.9 18.1 194 113-328 87-313 (459)
364 PRK07036 hypothetical protein; 97.9 0.0003 6.6E-09 71.8 15.3 92 241-341 207-313 (466)
365 PRK07483 hypothetical protein; 97.9 0.00063 1.4E-08 69.1 17.4 92 241-341 186-292 (443)
366 PRK07030 adenosylmethionine--8 97.9 0.00055 1.2E-08 70.0 16.7 93 240-341 201-307 (466)
367 PF00202 Aminotran_3: Aminotra 97.9 0.00082 1.8E-08 65.8 17.0 200 114-328 33-261 (339)
368 TIGR00709 dat 2,4-diaminobutyr 97.9 0.00085 1.8E-08 68.1 17.5 75 251-328 206-290 (442)
369 PRK08742 adenosylmethionine--8 97.9 0.0008 1.7E-08 68.9 17.4 93 240-341 223-329 (472)
370 KOG0633 Histidinol phosphate a 97.8 0.00013 2.9E-09 67.9 9.6 157 171-345 88-254 (375)
371 PRK06938 diaminobutyrate--2-ox 97.8 0.00076 1.7E-08 68.9 15.5 198 113-328 79-315 (464)
372 PRK12566 glycine dehydrogenase 97.7 0.0012 2.5E-08 72.1 16.2 150 153-329 129-289 (954)
373 KOG1402 Ornithine aminotransfe 97.7 0.0023 5.1E-08 61.5 16.0 191 114-328 76-292 (427)
374 TIGR03251 LAT_fam L-lysine 6-t 97.7 0.0013 2.8E-08 66.5 15.3 83 240-327 205-298 (431)
375 TIGR00699 GABAtrns_euk 4-amino 97.6 0.0015 3.2E-08 66.7 15.6 76 239-317 237-325 (464)
376 COG1932 SerC Phosphoserine ami 97.6 0.00045 9.7E-09 67.2 11.0 208 104-343 6-223 (365)
377 PRK06931 diaminobutyrate--2-ox 97.6 0.0026 5.6E-08 64.9 16.6 74 252-328 226-309 (459)
378 KOG0628 Aromatic-L-amino-acid/ 97.5 0.0022 4.8E-08 64.0 14.2 165 142-317 107-306 (511)
379 COG3033 TnaA Tryptophanase [Am 97.5 0.00072 1.6E-08 65.6 10.3 196 110-329 56-283 (471)
380 KOG1401 Acetylornithine aminot 97.4 0.0044 9.6E-08 61.1 14.7 205 113-343 72-299 (433)
381 PRK08297 L-lysine aminotransfe 97.4 0.0051 1.1E-07 62.5 15.9 83 240-327 212-305 (443)
382 PF12897 Aminotran_MocR: Alani 97.4 0.0036 7.8E-08 61.6 13.9 173 137-329 61-270 (425)
383 PLN02974 adenosylmethionine-8- 97.4 0.0053 1.1E-07 66.8 16.1 91 241-340 567-676 (817)
384 KOG1411 Aspartate aminotransfe 97.3 0.0018 3.9E-08 62.6 10.1 158 170-342 122-300 (427)
385 COG0161 BioA Adenosylmethionin 97.2 0.0058 1.3E-07 61.7 13.1 93 240-342 200-308 (449)
386 KOG1404 Alanine-glyoxylate ami 97.0 0.007 1.5E-07 59.5 11.4 75 268-352 235-316 (442)
387 PLN02994 1-aminocyclopropane-1 97.0 0.0034 7.3E-08 54.6 8.0 52 148-203 96-152 (153)
388 KOG1403 Predicted alanine-glyo 96.4 0.023 5E-07 54.2 9.7 226 102-352 50-315 (452)
389 KOG3846 L-kynurenine hydrolase 96.0 0.014 3.1E-07 55.8 6.2 197 113-328 78-292 (465)
390 KOG1412 Aspartate aminotransfe 95.4 0.095 2.1E-06 50.4 9.0 142 171-322 102-263 (410)
391 KOG2040 Glycine dehydrogenase 94.2 0.087 1.9E-06 55.0 5.8 150 154-328 169-327 (1001)
392 KOG1405 4-aminobutyrate aminot 93.9 0.036 7.8E-07 54.0 2.2 71 240-311 255-341 (484)
393 KOG2790 Phosphoserine aminotra 92.9 1.1 2.4E-05 42.7 10.4 201 103-329 7-220 (370)
394 PF04864 Alliinase_C: Allinase 90.8 0.51 1.1E-05 46.1 5.8 157 147-341 46-218 (363)
395 KOG3843 Predicted serine hydro 85.3 0.56 1.2E-05 44.3 2.2 104 237-348 140-254 (432)
396 PF04131 NanE: Putative N-acet 82.6 2.8 6E-05 37.7 5.3 72 237-315 51-123 (192)
397 COG3010 NanE Putative N-acetyl 78.6 5.4 0.00012 36.4 5.8 71 238-315 86-158 (229)
398 TIGR03586 PseI pseudaminic aci 62.1 16 0.00036 35.7 5.6 88 235-327 141-240 (327)
399 PRK13396 3-deoxy-7-phosphohept 61.9 19 0.00041 35.6 6.0 59 235-293 215-285 (352)
400 PRK12595 bifunctional 3-deoxy- 60.9 22 0.00048 35.2 6.3 93 235-328 232-341 (360)
401 TIGR01361 DAHP_synth_Bsub phos 59.1 21 0.00046 33.7 5.6 57 235-291 139-206 (260)
402 COG1504 Uncharacterized conser 56.4 22 0.00047 29.2 4.4 49 236-285 47-95 (121)
403 COG3414 SgaB Phosphotransferas 54.9 46 0.00099 26.4 6.0 66 269-341 20-88 (93)
404 COG2870 RfaE ADP-heptose synth 53.4 39 0.00085 34.0 6.5 36 251-286 143-178 (467)
405 smart00642 Aamy Alpha-amylase 50.6 12 0.00027 32.6 2.4 27 261-287 65-91 (166)
406 COG1184 GCD2 Translation initi 49.9 2.3E+02 0.0051 27.4 11.1 122 143-285 96-227 (301)
407 COG1105 FruK Fructose-1-phosph 48.3 67 0.0015 31.2 7.2 55 235-289 108-169 (310)
408 PF02310 B12-binding: B12 bind 47.4 26 0.00056 28.1 3.7 52 238-289 38-91 (121)
409 COG4820 EutJ Ethanolamine util 47.0 50 0.0011 30.3 5.7 88 157-278 133-221 (277)
410 PRK02261 methylaspartate mutas 46.9 58 0.0012 27.5 5.9 57 223-284 31-90 (137)
411 cd02067 B12-binding B12 bindin 46.8 44 0.00095 26.9 5.0 51 237-287 36-89 (119)
412 PRK00945 acetyl-CoA decarbonyl 46.5 1.1E+02 0.0023 27.1 7.6 62 237-298 21-82 (171)
413 PF00128 Alpha-amylase: Alpha 46.0 11 0.00023 35.2 1.4 28 260-287 46-73 (316)
414 PRK13398 3-deoxy-7-phosphohept 45.9 34 0.00073 32.5 4.7 57 235-291 141-208 (266)
415 cd05126 Mth938 Mth938 domain. 45.6 65 0.0014 26.5 5.8 50 237-287 45-94 (117)
416 PRK13397 3-deoxy-7-phosphohept 44.2 57 0.0012 30.7 5.9 58 235-292 129-197 (250)
417 PRK09441 cytoplasmic alpha-amy 43.5 17 0.00036 37.3 2.4 28 260-287 75-102 (479)
418 cd00984 DnaB_C DnaB helicase C 42.7 71 0.0015 29.0 6.3 49 236-284 104-168 (242)
419 TIGR02370 pyl_corrinoid methyl 40.3 70 0.0015 28.7 5.7 59 223-286 112-174 (197)
420 cd02072 Glm_B12_BD B12 binding 38.8 69 0.0015 26.9 5.0 53 223-280 27-79 (128)
421 PRK08057 cobalt-precorrin-6x r 38.1 72 0.0016 29.9 5.6 24 267-290 53-76 (248)
422 COG2099 CobK Precorrin-6x redu 37.9 69 0.0015 30.2 5.3 26 265-290 52-77 (257)
423 PF13378 MR_MLE_C: Enolase C-t 37.0 34 0.00073 27.2 2.8 51 237-287 4-54 (111)
424 cd02070 corrinoid_protein_B12- 36.9 81 0.0018 28.2 5.6 60 223-287 110-173 (201)
425 TIGR03569 NeuB_NnaB N-acetylne 36.5 54 0.0012 32.1 4.6 90 235-328 140-242 (329)
426 PF02571 CbiJ: Precorrin-6x re 36.5 39 0.00084 31.7 3.5 46 236-283 50-97 (249)
427 TIGR01501 MthylAspMutase methy 34.7 82 0.0018 26.7 4.9 53 223-280 29-81 (134)
428 cd05560 Xcc1710_like Xcc1710_l 33.8 1.7E+02 0.0036 23.7 6.4 50 236-287 38-87 (109)
429 TIGR02026 BchE magnesium-proto 33.1 80 0.0017 32.6 5.5 55 235-290 47-103 (497)
430 PLN00196 alpha-amylase; Provis 32.0 31 0.00068 35.0 2.3 28 260-287 86-113 (428)
431 PLN02672 methionine S-methyltr 32.0 6.9E+02 0.015 28.8 12.8 181 90-293 375-571 (1082)
432 COG2099 CobK Precorrin-6x redu 29.3 1.8E+02 0.0039 27.5 6.6 91 171-283 4-97 (257)
433 cd03315 MLE_like Muconate lact 29.3 95 0.0021 28.9 4.9 51 236-286 188-238 (265)
434 cd02069 methionine_synthase_B1 28.9 1.2E+02 0.0027 27.5 5.4 59 223-286 116-176 (213)
435 TIGR00789 flhB_rel flhB C-term 28.5 48 0.001 25.6 2.2 20 268-287 29-48 (82)
436 PRK10785 maltodextrin glucosid 27.9 41 0.00088 35.7 2.3 27 261-287 221-247 (598)
437 cd00248 Mth938-like Mth938-lik 27.8 2.2E+02 0.0047 22.9 6.2 50 237-287 38-87 (109)
438 PRK12457 2-dehydro-3-deoxyphos 27.8 1.6E+02 0.0034 28.3 5.9 54 237-290 140-202 (281)
439 PRK12721 secretion system appa 27.2 40 0.00087 33.3 2.0 37 251-287 255-310 (349)
440 PF14639 YqgF: Holliday-juncti 27.2 41 0.00089 29.0 1.8 42 238-279 50-91 (150)
441 COG0296 GlgB 1,4-alpha-glucan 26.5 57 0.0012 34.8 3.1 30 259-288 207-236 (628)
442 cd03319 L-Ala-DL-Glu_epimerase 26.3 99 0.0022 29.6 4.6 49 237-285 237-285 (316)
443 PRK08673 3-deoxy-7-phosphohept 26.2 1.4E+02 0.0031 29.3 5.6 58 235-292 207-275 (335)
444 TIGR00196 yjeF_cterm yjeF C-te 26.2 1.1E+02 0.0023 28.7 4.6 45 240-287 83-127 (272)
445 cd02065 B12-binding_like B12 b 26.1 1.5E+02 0.0032 23.6 5.0 53 238-290 37-91 (125)
446 PLN02361 alpha-amylase 25.8 49 0.0011 33.3 2.4 28 260-287 70-97 (401)
447 TIGR01362 KDO8P_synth 3-deoxy- 25.7 1.5E+02 0.0033 28.0 5.4 53 237-290 126-186 (258)
448 PRK10933 trehalose-6-phosphate 25.6 49 0.0011 34.7 2.4 27 261-287 76-102 (551)
449 PRK12313 glycogen branching en 25.4 51 0.0011 35.2 2.5 26 262-287 216-241 (633)
450 cd02071 MM_CoA_mut_B12_BD meth 25.2 1.6E+02 0.0034 24.0 5.0 57 224-285 28-87 (122)
451 KOG3974 Predicted sugar kinase 24.8 1.2E+02 0.0025 29.0 4.5 50 239-294 91-144 (306)
452 COG1091 RfbD dTDP-4-dehydrorha 24.8 1.8E+02 0.0039 27.9 5.8 48 237-285 36-98 (281)
453 cd04736 MDH_FMN Mandelate dehy 24.6 1.4E+02 0.003 29.7 5.3 71 236-311 243-318 (361)
454 TIGR02403 trehalose_treC alpha 24.5 52 0.0011 34.4 2.4 27 261-287 70-96 (543)
455 TIGR00160 MGSA methylglyoxal s 24.4 1.8E+02 0.004 25.0 5.2 47 241-287 63-112 (143)
456 PRK09505 malS alpha-amylase; R 24.1 55 0.0012 35.4 2.5 26 262-287 288-313 (683)
457 COG1803 MgsA Methylglyoxal syn 23.4 2E+02 0.0043 24.4 5.0 47 241-287 65-114 (142)
458 smart00481 POLIIIAc DNA polyme 23.1 2.8E+02 0.0061 19.6 6.3 47 236-284 13-59 (67)
459 PRK13585 1-(5-phosphoribosyl)- 22.7 1.3E+02 0.0028 27.5 4.4 48 239-286 33-83 (241)
460 TIGR02402 trehalose_TreZ malto 22.6 60 0.0013 34.0 2.4 28 260-287 154-181 (542)
461 PRK13109 flhB flagellar biosyn 22.6 57 0.0012 32.4 2.1 39 251-289 264-321 (358)
462 cd00308 enolase_like Enolase-s 22.5 1.6E+02 0.0034 26.7 4.9 51 236-286 153-203 (229)
463 PF01248 Ribosomal_L7Ae: Ribos 22.3 1.6E+02 0.0035 22.6 4.3 45 241-287 21-66 (95)
464 COG2876 AroA 3-deoxy-D-arabino 22.2 1.9E+02 0.0042 27.5 5.3 62 250-314 179-252 (286)
465 TIGR00421 ubiX_pad polyprenyl 21.8 2.9E+02 0.0063 24.5 6.3 65 102-166 112-176 (181)
466 COG2877 KdsA 3-deoxy-D-manno-o 21.8 1.8E+02 0.004 27.3 5.0 42 250-292 158-203 (279)
467 PF02603 Hpr_kinase_N: HPr Ser 21.6 1.5E+02 0.0032 24.6 4.1 40 242-286 73-112 (127)
468 PLN03244 alpha-amylase; Provis 21.5 70 0.0015 35.2 2.6 29 261-289 436-464 (872)
469 PRK05402 glycogen branching en 21.1 66 0.0014 35.0 2.4 25 263-287 312-336 (726)
470 TIGR02456 treS_nterm trehalose 21.1 62 0.0013 33.8 2.1 26 262-287 72-97 (539)
471 PF04413 Glycos_transf_N: 3-De 20.8 2.6E+02 0.0056 24.8 5.8 45 240-289 84-128 (186)
472 cd00532 MGS-like MGS-like doma 20.7 2.5E+02 0.0054 22.5 5.2 45 243-287 59-107 (112)
473 PRK13602 putative ribosomal pr 20.7 1.8E+02 0.0039 22.2 4.2 44 241-286 17-60 (82)
474 COG1519 KdtA 3-deoxy-D-manno-o 20.6 9.1E+02 0.02 24.6 10.3 88 180-287 64-154 (419)
475 COG1999 Uncharacterized protei 20.6 3.5E+02 0.0076 24.4 6.7 53 221-282 102-155 (207)
476 cd03316 MR_like Mandelate race 20.6 1.5E+02 0.0033 28.7 4.7 50 237-286 249-298 (357)
477 TIGR01769 GGGP geranylgeranylg 20.5 1.5E+02 0.0033 27.0 4.2 41 245-285 18-59 (205)
478 COG0434 SgcQ Predicted TIM-bar 20.2 2.4E+02 0.0052 26.6 5.4 71 239-314 164-236 (263)
479 TIGR03151 enACPred_II putative 20.2 2.8E+02 0.0062 26.7 6.4 64 239-314 75-139 (307)
480 TIGR01515 branching_enzym alph 20.1 72 0.0016 33.9 2.4 27 261-287 201-227 (613)
481 PF13380 CoA_binding_2: CoA bi 20.1 2.7E+02 0.0059 22.5 5.4 41 241-287 70-110 (116)
No 1
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-75 Score=548.83 Aligned_cols=282 Identities=71% Similarity=1.134 Sum_probs=273.4
Q ss_pred cchhcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHH
Q 018300 76 SSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (358)
Q Consensus 76 ~~~~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~ 155 (358)
..+...+|.+.|||++++|++|+.||+++|+||||||++|.+|+||++++++|+|+|||||.|||+|++++|++|.+|++
T Consensus 14 ~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~ 93 (477)
T KOG2467|consen 14 IKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQK 93 (477)
T ss_pred hhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC
Q 018300 156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (358)
Q Consensus 156 ~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 235 (358)
|+.+.||++++.|||||++.||+.||++++.++++|+|+||.+|+++|||++|||+++.++++..+.+|+.+||.+|+++
T Consensus 94 RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~T 173 (477)
T KOG2467|consen 94 RALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPST 173 (477)
T ss_pred HHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCc
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKS 315 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~ 315 (358)
|.||||.||+.+..+|||+||.+.|.|++.+|++++++||++.|++|++|+||.+|+++.++.|+||++||||++++||+
T Consensus 174 G~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKs 253 (477)
T KOG2467|consen 174 GYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKS 253 (477)
T ss_pred CceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcEEEEEEeCCCC---------chhHHHHHHhhccCCccccccccccc
Q 018300 316 LRGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 316 L~Gp~GG~I~~~~~~~---------~~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
|+|||||+|++++... ..|+++++|++++||++|||||+|.|
T Consensus 254 LRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtI 304 (477)
T KOG2467|consen 254 LRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTI 304 (477)
T ss_pred ccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchH
Confidence 9999999999998632 36899999999999999999999976
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-70 Score=523.02 Aligned_cols=263 Identities=59% Similarity=0.889 Sum_probs=256.3
Q ss_pred ccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~l 160 (358)
..|.+.||+++++|++|..||+..|+||+|||++|+.|++|+++.++|||+|||||.|||+||+++|++|.+|.+|++++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCH
Q 018300 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (358)
Q Consensus 161 fg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~ 240 (358)
||+++ +||+|.||+.||.+++.++++|||+||.+++.||||++|+. ++.++|..|+.++|++|++++.|||
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDy 155 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDY 155 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCH
Confidence 99998 58999999999999999999999999999999999999985 6788999999999999999999999
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCc
Q 018300 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (358)
Q Consensus 241 d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~ 320 (358)
|++++++.+++||+|+++.|.|++.+|++++++||+++|++|++|+||.+||+++|.+|+|+++||++++||||||+|||
T Consensus 156 D~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPr 235 (413)
T COG0112 156 DEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPR 235 (413)
T ss_pred HHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCccccccccccc
Q 018300 321 GGMIFFKKDPVLGVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 321 GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
||+|+++++ ++.++|++++|||.|||||+|+|
T Consensus 236 GG~Il~~~e-----el~kkin~aVFPg~qggpl~Hvi 267 (413)
T COG0112 236 GGIILTNDE-----ELAKKINSAVFPGLQGGPLMHVI 267 (413)
T ss_pred ceEEEeccH-----HHHHHhhhhcCCccCCChHHHHH
Confidence 999999986 89999999999999999999986
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=1.4e-63 Score=501.79 Aligned_cols=279 Identities=63% Similarity=1.067 Sum_probs=260.4
Q ss_pred hcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la 158 (358)
..+.|++.||+++++|++|+.||+++|+||||||++|+.|+++++++++|+|+|||||.|||+|++++|++|.+|++|++
T Consensus 125 ~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~ 204 (586)
T PLN02271 125 GNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERAL 204 (586)
T ss_pred HhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc-hhccccCCceEEEEeceecCCCCC
Q 018300 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP-KRRVSGTSIYFESMPYRLDESTGL 237 (358)
Q Consensus 159 ~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 237 (358)
++||+++++|++||++.||+.||++++.++++|||+||.++++||||++|++++. ...+...|..++.++|+++++++.
T Consensus 205 ~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~ 284 (586)
T PLN02271 205 AAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGY 284 (586)
T ss_pred HHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCc
Confidence 9999999899999999999999999999999999999999999999999987542 134567888999999999988999
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCc
Q 018300 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 317 (358)
Q Consensus 238 iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~ 317 (358)
||+|++++.+..++||+|+++.+.|++.+|+++|+++|+++|++|++|+||++|+++.+.+++|+++||++++|+||||+
T Consensus 285 IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLr 364 (586)
T PLN02271 285 IDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLR 364 (586)
T ss_pred cCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCC
Confidence 99999999777789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEEEEeCCCC--------------chhHHHHHHhhccCCccccccccccc
Q 018300 318 GPRGGMIFFKKDPV--------------LGVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 318 Gp~GG~I~~~~~~~--------------~~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
||+||+|+++++.. ..+++.++|++++||++|+|||+|.|
T Consensus 365 GPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~I 418 (586)
T PLN02271 365 GPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHI 418 (586)
T ss_pred CCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHH
Confidence 99999999986411 23578999999999999999999975
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=1.8e-64 Score=496.07 Aligned_cols=275 Identities=57% Similarity=0.927 Sum_probs=226.1
Q ss_pred ccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC
Q 018300 83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (358)
Q Consensus 83 l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg 162 (358)
|++.||+++++|++|.+||+++|+||||||++||.|++++++.+.|+|+|||||.|||+|++++|++|++|+++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHH
Q 018300 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (358)
Q Consensus 163 ~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~ 242 (358)
+++++|.++|++.||+.||++++.+|++|||+||.+++.+|||++|+.....+++...+..++.++|+++++++.||+|+
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99999999999999999999999999999999999999999999999865444445577889999999999999999999
Q ss_pred HHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcEE
Q 018300 243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322 (358)
Q Consensus 243 le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~GG 322 (358)
++++++.++||+|+++.|+|++.+|+++|++||+++|++|++|+||.+||+++|.+|+||++||++++||||+|+|||||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCC--------chhHHHHHHhhccCCccccccccccc
Q 018300 323 MIFFKKDPV--------LGVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 323 ~I~~~~~~~--------~~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
+|+++++.. .-++++++|++++||++|+|||+|.|
T Consensus 241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~i 283 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRI 283 (399)
T ss_dssp EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHH
T ss_pred EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHH
Confidence 999992100 01389999999999999999999975
No 5
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=2.9e-52 Score=418.08 Aligned_cols=261 Identities=44% Similarity=0.727 Sum_probs=242.5
Q ss_pred ccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~l 160 (358)
..|++.||+++++|++|+.||+++|+||||||++|+.|++++++.++|+|+|||||.|||+|++++|++|.+|.+|++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceEEeCCCHHHHHHHHHHhccC-------------------------------CCEEEecCCCCCcccccc
Q 018300 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKP-------------------------------HDRIMGLDLPHGGHLSHG 209 (358)
Q Consensus 161 fg~~~~~~~v~V~~~SGt~A~~~a~~all~p-------------------------------GD~Vl~~~~~~ggh~s~~ 209 (358)
||+++ +||++.||+.||++++.++++| ||+|+.+++.+|||++|+
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99998 5899999999999999999987 899999999999999998
Q ss_pred cccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEecccc
Q 018300 210 FMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHI 289 (358)
Q Consensus 210 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~ 289 (358)
+ ...+.+..++..+|+++++++.+|++++++++...+|++++.+.|++++..|+++|+++|+++|+++++|+||+
T Consensus 184 ~-----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~ 258 (493)
T PRK13580 184 F-----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHF 258 (493)
T ss_pred c-----ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchh
Confidence 6 44677888889999999888999999999999888888999999999999999999999999999999999999
Q ss_pred ccccccCCcc---CCCCCCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhhccCCccccccccccc
Q 018300 290 SGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 290 ~Gl~~~g~~~---~pl~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
+|++..+..+ ++++++|++++|+||+|+||+||+|++++ ++.+.|+++. |+++++||+|.+
T Consensus 259 ~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~------~l~~~L~~a~-P~i~gg~l~p~i 322 (493)
T PRK13580 259 AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK------EYADAVDKGC-PLVLGGPLPHVM 322 (493)
T ss_pred hceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH------HHHHHHhhCC-CcccCCCccHHH
Confidence 9999866544 56669999999999999999999999987 6888888774 899999999864
No 6
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=5e-51 Score=413.28 Aligned_cols=280 Identities=77% Similarity=1.217 Sum_probs=252.5
Q ss_pred hhcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 78 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 78 ~~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
++...|++.||+++++|++|..||+++|+||||||++|+.|++++++.++++|++|+||+|||+|+++++++|++|++++
T Consensus 10 ~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~ 89 (475)
T PLN03226 10 WGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRA 89 (475)
T ss_pred cchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHH
Confidence 45566899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCC
Q 018300 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (358)
Q Consensus 158 a~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (358)
+++|+.+++.|.++++++||+.||.+++.++++|||+|++++..+|||++|++......+...+..++.++|.++++++.
T Consensus 90 ~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~ 169 (475)
T PLN03226 90 LEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGL 169 (475)
T ss_pred HHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCC
Confidence 99999998888788999999999999999999999999999999999999987543333445566677778888888899
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCc
Q 018300 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 317 (358)
Q Consensus 238 iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~ 317 (358)
+|+++|++++..++||+|+++.++|++..|+++|.++|+++|+++++|+||++|++..+..++|++++|++++|+||||+
T Consensus 170 iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~ 249 (475)
T PLN03226 170 IDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLR 249 (475)
T ss_pred cCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCccccc
Confidence 99999999987778999988888899999999999999999999999999999999887777888899999999999999
Q ss_pred cCcEEEEEEeCCCC--------chhHHHHHHhhccCCccccccccccc
Q 018300 318 GPRGGMIFFKKDPV--------LGVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 318 Gp~GG~I~~~~~~~--------~~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
||+||+|+++++.+ ...++.++++.+.||+++++||+|.+
T Consensus 250 GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~i 297 (475)
T PLN03226 250 GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTI 297 (475)
T ss_pred CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHH
Confidence 99999999987532 11256668899999999999998865
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=8.1e-44 Score=359.64 Aligned_cols=276 Identities=69% Similarity=1.137 Sum_probs=238.9
Q ss_pred hcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la 158 (358)
+...|++.||++++++.+|.++|+++|+||||||++||.|++++.+.++++|++|+|+++|+.|.+..+++|+.++++++
T Consensus 11 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a 90 (452)
T PTZ00094 11 LNQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRAL 90 (452)
T ss_pred hhhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHH
Confidence 45668899999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred HHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCC
Q 018300 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (358)
Q Consensus 159 ~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 238 (358)
++||+++++|.++++++||+.||.+++.++++|||+|++.+.+|++|++++...........+..++..++++++ ++.+
T Consensus 91 ~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~i 169 (452)
T PTZ00094 91 EAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLI 169 (452)
T ss_pred HHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC-CCCc
Confidence 999998877666777889999999999999999999999999999999875321101112334556667777775 4899
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCcc
Q 018300 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (358)
Q Consensus 239 D~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~G 318 (358)
|++++++.++..++++|+++.+++|...|+++|.++|+++|+++++|++|++|++..+..+.+++++|++++|+||||+|
T Consensus 170 d~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~G 249 (452)
T PTZ00094 170 DYDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRG 249 (452)
T ss_pred CHHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCC
Confidence 99999999876688988887788999999999999999999999999999999987776666777999999999999999
Q ss_pred CcEEEEEEeCCCCchhHHHHHHhhccCCccccccccccc
Q 018300 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 319 p~GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
|+||+++++++.. ..+..+++...||.++|+|+.+.+
T Consensus 250 P~Gg~l~~~~~~~--~~l~~~~~~~~~p~~~G~~~~~~i 286 (452)
T PTZ00094 250 PRSGLIFYRKKVK--PDIENKINEAVFPGLQGGPHNHQI 286 (452)
T ss_pred CCceEEEEecccc--hHHHHhhccccCCCCCCCchHHHH
Confidence 9999999987522 135667777889999999987653
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=7.9e-41 Score=334.54 Aligned_cols=266 Identities=59% Similarity=0.890 Sum_probs=233.5
Q ss_pred chhcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHH
Q 018300 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (358)
Q Consensus 77 ~~~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~ 156 (358)
.|+++.|++.||+++++|++|..+|.+.++|+||||+++|.|++++.+.+.++|..|++|+|+++|++.++++|+.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~ 82 (416)
T PRK13034 3 FFFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIER 82 (416)
T ss_pred chhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999998899999999999999999999999989999
Q ss_pred HHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC
Q 018300 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (358)
Q Consensus 157 la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (358)
++++||.++ +.+.+.||+.||.+++.++++|||+|++.+..|++++.++. .....+..++...+++++.++
T Consensus 83 la~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~ 153 (416)
T PRK13034 83 AKQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA-----KVSLSGKWYNAVQYGVDRLTG 153 (416)
T ss_pred HHHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC-----cceeccceeeeEEcccccccC
Confidence 999999987 35667899999999999999999999999988888765543 122234444445677776677
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcC
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L 316 (358)
.+|++++++.+...++|+|+++.+.+|...|+++|.++|+++|++|++|+||++|..+.|..+.+++++|++++|+||+|
T Consensus 154 ~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l 233 (416)
T PRK13034 154 LIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTL 233 (416)
T ss_pred CcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccC
Confidence 89999999988666789999877789999999999999999999999999999999887776666678999999999999
Q ss_pred ccCcEEEEEEeCCCCchhHHHHHHhhccCCcccccccccc
Q 018300 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQVGFVSYV 356 (358)
Q Consensus 317 ~Gp~GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~~~ 356 (358)
+||.||+|+++++ ++.++++...|++++++++.+.
T Consensus 234 ~g~~GG~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 268 (416)
T PRK13034 234 RGPRGGMILTNDE-----EIAKKINSAVFPGLQGGPLMHV 268 (416)
T ss_pred CCCCCeEEEECcH-----HHHHHHHhhcCCcccCCccHHH
Confidence 9999999999876 6778888889999888877654
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=2.8e-35 Score=293.70 Aligned_cols=262 Identities=58% Similarity=0.881 Sum_probs=221.0
Q ss_pred hcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la 158 (358)
+..+|++.||+++++|+++..++++.++|++++|++++.|++++...+.++|..|+++++++.|.+..+++|+.++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la 81 (416)
T PRK00011 2 FMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAK 81 (416)
T ss_pred cchhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999888888888899999999999999999998899999
Q ss_pred HHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCC
Q 018300 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (358)
Q Consensus 159 ~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 238 (358)
+++|++.. .|.++|||.|+..++.++++|||+|++++++|+++++++. .....+...+++.++++++++.+
T Consensus 82 ~~~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~ 152 (416)
T PRK00011 82 ELFGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGS-----PVNFSGKLYNVVSYGVDEETGLI 152 (416)
T ss_pred HHhCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCcccccc-----ccccccceeeEeecCcCcccCCc
Confidence 99999873 4667899999999999999999999999999988766532 11223333456666676556789
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCcc
Q 018300 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (358)
Q Consensus 239 D~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~G 318 (358)
|++++++.++..++|+|++..+++|...|+++|.++|+++|+++++|++|+.|+...+..+.+++++|++++|+||+|+|
T Consensus 153 d~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g 232 (416)
T PRK00011 153 DYDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRG 232 (416)
T ss_pred CHHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCC
Confidence 99999999875578999887778888889999999999999999999999988876554455555889999999999999
Q ss_pred CcEEEEEEeCCCCchhHHHHHHhhccCCcccccccc
Q 018300 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQVGFVS 354 (358)
Q Consensus 319 p~GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~ 354 (358)
|+||+++++++ ++.+++....+++..++|..
T Consensus 233 ~~gg~i~~~~~-----~~~~~l~~~~~~~~~~~~~~ 263 (416)
T PRK00011 233 PRGGLILTNDE-----ELAKKINSAVFPGIQGGPLM 263 (416)
T ss_pred CCceEEEeCCH-----HHHHHHHHHhCccccCCccH
Confidence 99999999765 67788877666666555543
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=4.6e-35 Score=290.46 Aligned_cols=259 Identities=63% Similarity=0.987 Sum_probs=218.6
Q ss_pred cccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC
Q 018300 84 GEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 163 (358)
Q Consensus 84 ~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~ 163 (358)
.++|++++++|.+|..+++++++|+|+++++++.|++++...+..+|..|+|+.++|.|.+..+++|+.+++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~ 80 (402)
T cd00378 1 ADVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA 80 (402)
T ss_pred CCcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC
Confidence 37899999999999999999999999999999999999999888899999999999999999999999889999999999
Q ss_pred CCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHH
Q 018300 164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (358)
Q Consensus 164 ~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~l 243 (358)
+.. .|.++||+.|+..++.++++|||+|+++++.|++++.++... .+...|..+..++++.+++++.+|++++
T Consensus 81 ~~~----~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l 153 (402)
T cd00378 81 EYA----NVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDAL 153 (402)
T ss_pred Cce----eeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHH
Confidence 863 577789999999999999999999999999999887764311 1334565455555555433678999999
Q ss_pred HHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcEEE
Q 018300 244 EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGM 323 (358)
Q Consensus 244 e~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~GG~ 323 (358)
++.+...++|+|++..+++|...|+++|.++|+++|+++++|++|+.|+...|..+.++.++|++++|+||+|+||+||+
T Consensus 154 ~~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~ 233 (402)
T cd00378 154 EKMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGL 233 (402)
T ss_pred HHHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceE
Confidence 99886568999988778889888999999999999999999999999987666545555578999999999999999999
Q ss_pred EEEeCCCCchhHHHHHHhhccCCcccccccc
Q 018300 324 IFFKKDPVLGVELESAINNAVFPGLQVGFVS 354 (358)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~ 354 (358)
++++++ ++.+++.....++..++++.
T Consensus 234 i~~~~~-----~~~~~l~~~~~~~~~~~~~~ 259 (402)
T cd00378 234 ILTRKG-----ELAKKINSAVFPGLQGGPHL 259 (402)
T ss_pred EEeccH-----HHHHHHHHHhCccccCCchH
Confidence 999885 67777776666666666643
No 11
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=5.4e-24 Score=211.90 Aligned_cols=202 Identities=26% Similarity=0.329 Sum_probs=152.9
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCC-CCCcceEEeCC-CHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLS-GSPANFEVYT 186 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~-~~~~v~V~~~S-Gt~A~~~a~~ 186 (358)
+.....|..|++++...+.+.+++...+ .+..+....+ ..+.+|+.+++++|+++ + +|.++. .|.|++.+..
T Consensus 29 aa~~~~p~~V~~a~~~~~~~~~an~~r~-~~~~~~~~t~-~~e~aRe~va~~~~a~~~~----eIvft~~tT~aln~va~ 102 (405)
T COG0520 29 AATSQKPQAVLDAVAEYYRRYNANVHRG-AHTLAEEATD-LYEAAREAVARFLNADSSD----EIVFTRGTTEALNLVAR 102 (405)
T ss_pred cccccCCHHHHHHHHHHHHhhcCCcCcc-cchHHHHHHH-HHHHHHHHHHHHhCCCCCC----eEEEeCChhHHHHHHHH
Confidence 4455679999999988776555432222 1222333334 44558999999999995 4 455555 5569999999
Q ss_pred Hh---ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC-CC-
Q 018300 187 AI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-SA- 261 (358)
Q Consensus 187 al---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~-s~- 261 (358)
++ +++||+|++++.+|.++...+. ......|..++.++ ++ +++.+|.|++++++.+ ++|+|.+++ |+
T Consensus 103 ~l~~~~~~gdeIv~s~~EH~sn~~pw~----~~~~~~Ga~v~~i~--~~-~~g~~~~~~~~~~i~~-~Tklvais~vSn~ 174 (405)
T COG0520 103 GLGRSLKPGDEIVVSDLEHHSNIVPWQ----ELAKRTGAKVRVIP--LD-DDGLLDLDALEKLITP-KTKLVALSHVSNV 174 (405)
T ss_pred HhhhhhcCCCEEEEccCcchhhHHHHH----HHHHhcCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CceEEEEECcccc
Confidence 88 7999999999999988865432 11234466555555 55 5789999999998764 899998865 43
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.|...|+++|+++||++|+++++|++|++|.. +..++ +||++++|+||||.||.| |+++++++
T Consensus 175 tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~-----~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~ 240 (405)
T COG0520 175 TGTVNPVKEIAELAHEHGALVLVDAAQAAGHL-----PIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKE 240 (405)
T ss_pred ccccchHHHHHHHHHHcCCEEEEECccccCcc-----CCCchhcCCCEEEEcccccccCCCceEEEEEchH
Confidence 57899999999999999999999999998875 33444 899999999999999988 88888884
No 12
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.88 E-value=3.9e-22 Score=194.00 Aligned_cols=200 Identities=19% Similarity=0.256 Sum_probs=156.3
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
+..+++.|.|+++|...++..| |+|.+-+..|.+..+.+|+ +|+.+++++|+++.+ .+++.+||++|++++.+.
T Consensus 8 ~ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve~-AR~~iA~llga~~~e---IiFTSG~TEsnNlaI~g~ 81 (386)
T COG1104 8 AATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVEE-AREQIAKLLGADPEE---IIFTSGATESNNLAIKGA 81 (386)
T ss_pred cccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHHH-HHHHHHHHhCCCCCe---EEEecCCcHHHHHHHHhh
Confidence 5677889999999999988775 8888877678887777776 899999999999853 244445688999988873
Q ss_pred --c----cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 189 --L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 189 --l----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
. +.|.+|+++..+|.+.+... +.++..|. ++-+++++. +|.+|+++|++.+++ ++.||.+.+.|
T Consensus 82 ~~a~~~~~~~~HIIts~iEH~aVl~~~-----~~Le~~g~--~Vtyl~V~~-~G~v~~e~L~~al~~-~T~LVSim~aNn 152 (386)
T COG1104 82 ALAYRNAQKGKHIITSAIEHPAVLNTC-----RYLERQGF--EVTYLPVDS-NGLVDLEQLEEALRP-DTILVSIMHANN 152 (386)
T ss_pred HHhhhcccCCCeEEEcccccHHHHHHH-----HHHHhcCC--eEEEeCCCC-CCeEcHHHHHHhcCC-CceEEEEEeccc
Confidence 2 25789999998887654321 22223354 555555774 799999999999875 56777665544
Q ss_pred -CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 -~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.|+++|+++|.++|+++|+++++|++|++|-+ |.+++ ++|++++|.|| |.||+| |+++.++.
T Consensus 153 E~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gki-----pi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~ 218 (386)
T COG1104 153 ETGTIQPIAEIGEICKERGILFHVDAVQAVGKI-----PIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPG 218 (386)
T ss_pred CeeecccHHHHHHHHHHcCCeEEEehhhhcCce-----eccccccCcceEEeehhh-ccCCCceEEEEECCC
Confidence 58999999999999999999999999998865 33343 79999999999 899999 88888664
No 13
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.87 E-value=4.8e-21 Score=187.35 Aligned_cols=200 Identities=19% Similarity=0.220 Sum_probs=160.4
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pG 192 (358)
.....++++.+++.+.+.. ..++++++|+. +++++|+.+. +.++|||.|+++++.++ ++||
T Consensus 13 i~~~e~~~v~~vl~sg~i~---------~G~~v~~FE~~----~ae~~G~k~a-----va~~sgT~AL~laL~al~ig~G 74 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLT---------GGPFVRRFEQA----FAEYLGVKYA-----VAVSSGTAALHLALLALAIGPG 74 (374)
T ss_pred cchHHHHHHHHHHHcCCee---------cChHHHHHHHH----HHHHhCCCeE-----EEecChHHHHHHHHHhcCCCCC
Confidence 4566777777777665421 12457778874 7899999984 77899999999999977 8999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHH
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~ 272 (358)
|+|++++..+-++ ...+...|. +++.+|+|+++..+|++.||+.+++ ++|.|+.- +.+|...|+++|.
T Consensus 75 DeVI~ps~TfvAT--------an~i~~~Ga--~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~~i~ 142 (374)
T COG0399 75 DEVIVPSFTFVAT--------ANAVLLVGA--KPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMDAIM 142 (374)
T ss_pred CEEEecCCchHHH--------HHHHHHcCC--eEEEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHHHHH
Confidence 9999988643322 234556676 7889999999999999999999975 68987653 5788999999999
Q ss_pred HHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCc--CcCccCcEEEEEEeCCCCchhHHHHHHhhccCCcccc
Q 018300 273 QIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQV 350 (358)
Q Consensus 273 ~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~h--K~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~ 350 (358)
++|++||++||.|+||+.|..+.|..... ..|+.+||+| |.|..-.||+|+++++ ++.++++...+.|...
T Consensus 143 ~la~~~~l~vIEDaAqa~Ga~y~gk~vGt--~Gd~~~fSF~~~K~ittgEGGav~tnd~-----ela~k~~~lr~hG~~~ 215 (374)
T COG0399 143 ALAKRHGLPVIEDAAQAHGATYKGKKVGS--FGDIGAFSFHATKNLTTGEGGAVVTNDE-----ELAEKARSLRNHGLSR 215 (374)
T ss_pred HHHHHcCCeEEEEcchhccCeecCccccc--ccceEEEEecCCCCccccCceEEEeCCH-----HHHHHHHHHHHhCcCC
Confidence 99999999999999999999887753222 4677777776 9997669999999998 9999999888877754
No 14
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.86 E-value=6.7e-21 Score=186.23 Aligned_cols=198 Identities=19% Similarity=0.228 Sum_probs=154.9
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
.+..++++.|++||..++.+.+ |+|.++ +.|.+..+.+|+ +|+.+|+++|+++.+ .+++.++|++|++++.++
T Consensus 50 ~at~p~~~~Vldam~~~~~~~~--~nPh~~-~y~w~~~~~~E~-aR~~VAklInAd~~d---IiFts~ATEs~Nlvl~~v 122 (428)
T KOG1549|consen 50 QATGPMDPRVLDAMLPYLLEYL--GNPHSR-SYGWKAEDAVEA-AREQVAKLINADPSD---IVFTSGATESNNLVLKGV 122 (428)
T ss_pred CcCCCCCHHHHHHHHHHHHHhh--cCCCcc-ccchhhhHHHHH-HHHHHHHHhCCCCCc---EEEeCCchHHHHHHHHHh
Confidence 6677889999999998887665 788887 446666667886 899999999999974 244556678999999998
Q ss_pred -ccCCC----EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 189 -LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 189 -l~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
+.++| +|++++.+|.++.- + +..+.-.| +++..++++ +++.+|.+++++.++. ++++|.+...+
T Consensus 123 ~~~~~~~~~k~iitl~~eH~~v~~-s----~~~l~~~g--~~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv~I~~Vnn~ 193 (428)
T KOG1549|consen 123 ARFFGDKTKKHIITLQTEHPCVLD-S----CRALQEEG--LEVTYLPVE-DSGLVDISKLREAIRS-KTRLVSIMHVNNE 193 (428)
T ss_pred hccccccccceEEEecccCcchhH-H----HHHHHhcC--eEEEEeccC-ccccccHHHHHHhcCC-CceEEEEEecccC
Confidence 77788 99998877665432 1 12233345 455666666 6789999999999875 89998876543
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCc-EEEEEEeC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKK 328 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~-GG~I~~~~ 328 (358)
.+..+|+++|.++|++.|+.+++|+||+.|.+ +..+. ++|++++|.|||+ ||+ -|++++++
T Consensus 194 ~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i-----~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 194 IGVLQPVKEIVKICREEGVQVHVDAAQAVGKI-----PVDVQELNADFLSISAHKIY-GPPGIGALYVRR 257 (428)
T ss_pred ccccccHHHHHHHhCcCCcEEEeehhhhcCCc-----cccHHHcCchheeeeccccc-CCCcceEEEEcc
Confidence 46789999999999999999999999999976 22333 8999999999975 566 49999986
No 15
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.86 E-value=1.6e-20 Score=184.73 Aligned_cols=213 Identities=22% Similarity=0.300 Sum_probs=154.7
Q ss_pred cccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHH
Q 018300 108 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (358)
Q Consensus 108 ias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~a 187 (358)
.++..++|+.|++++...+.+.+..+..+ .+..+.+..+.+++ +++.+++++|+++++ ..++..|+|.|+..++.+
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~r~~la~~lg~~~~~--~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFYANPHSG-VSHRSREFAEILEE-AREALAKLLGAPPDE--EVVFTSNGTEALNAVASS 80 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSGSSTSTS-SSTTSHHHHHHHHH-HHHHHHHHHTSSTTE--EEEEESSHHHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhhhcCccc-ccchhhhhhHHHHH-HHHHHHHhcCCcccc--ccccccccchhhhhhhhc
Confidence 36778899999999998877766443222 23334455555555 899999999999821 234556677799999999
Q ss_pred h---ccCCCEEEecCCCCCcccccccccchhcc-ccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC--CC
Q 018300 188 I---LKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA--SA 261 (358)
Q Consensus 188 l---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~--s~ 261 (358)
+ +++||+|++.+.+|.+... ++..+ ...|..++.++ .+ .++.+|++++++.+. .++++|.+.+ +.
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~-----~~~~~~~~~g~~v~~i~--~~-~~~~~~~~~~~~~l~-~~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRY-----PWEEIAKRKGAEVRVIP--AD-PGGSLDLEDLEEALN-PDTRLVSISHVENS 151 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHH-----HHHHHHHHTTEEEEEEE--EG-TTSSCSHHHHHHHHH-TTESEEEEESBETT
T ss_pred ccccccccccccccccccccccc-----ccccccccchhhhcccc--cc-ccchhhhhhhhhhhc-cccceEEeeccccc
Confidence 8 8999999998876555431 11122 24566555444 54 357899999999987 5889887754 34
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHHH
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~~ 338 (358)
.|...|+++|.++||++|+++++|++|++|.. +.+++ ++|++++|+|| |.||+| |+++.++ ++.+
T Consensus 152 tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~-----~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~------~~~~ 219 (371)
T PF00266_consen 152 TGVRNPIEEIAKLAHEYGALLVVDAAQSAGCV-----PIDLDELGADFLVFSSHK-LGGPPGLGFLYVRP------EAIE 219 (371)
T ss_dssp TTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTS-----S--TTTTTESEEEEESTS-TTSSSTEEEEEEEH------HHHH
T ss_pred ccEEeeeceehhhhhccCCceeEechhccccc-----cccccccccceeeecccc-cCCCCchhhheehh------hhhh
Confidence 68899999999999999999999999998865 33444 89999999999 999998 8898888 5666
Q ss_pred HHhhccC
Q 018300 339 AINNAVF 345 (358)
Q Consensus 339 ~i~~~~f 345 (358)
+++...+
T Consensus 220 ~~~p~~~ 226 (371)
T PF00266_consen 220 RLRPAKP 226 (371)
T ss_dssp HHHTSSS
T ss_pred ccccccc
Confidence 6755433
No 16
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.85 E-value=3e-20 Score=182.84 Aligned_cols=195 Identities=22% Similarity=0.231 Sum_probs=141.2
Q ss_pred HHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCCCEE
Q 018300 117 AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRI 195 (358)
Q Consensus 117 ~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pGD~V 195 (358)
+.++++.+.+.+.+. ....+.++++|+. ++++||.++ .+.++|||.|+.+++.++ ++|||+|
T Consensus 6 e~~~~v~~~l~s~~~--------~~~g~~~~~fE~~----~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gdeV 68 (363)
T PF01041_consen 6 EEIDAVLEVLRSGWL--------STYGPYVEEFEKE----FAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDEV 68 (363)
T ss_dssp HHHHHHHHHHHHTCC--------SSSSHHHHHHHHH----HHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSEE
T ss_pred HHHHHHHHHHHhCCc--------cCCCHHHHHHHHH----HHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCceE
Confidence 445556666555432 1113556777764 788999887 377899999999999999 8999999
Q ss_pred EecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHH
Q 018300 196 MGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIA 275 (358)
Q Consensus 196 l~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia 275 (358)
+++.....+. ..++...|. +++.++++++++.+|++++++++.+ ++|+|++. +.+|...|+++|.++|
T Consensus 69 i~p~~t~~~~--------~~ai~~~G~--~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~~~ 136 (363)
T PF01041_consen 69 IVPAYTFPAT--------ASAILWAGA--EPVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRAIA 136 (363)
T ss_dssp EEESSS-THH--------HHHHHHTT---EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHHHH
T ss_pred ecCCCcchHH--------HHHHHHhcc--EEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHHHH
Confidence 9987543322 124556665 7888899999999999999999875 67877664 4677778999999999
Q ss_pred HHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCc--CcCccCcEEEEEEeCCCCchhHHHHHHhhccCCcc
Q 018300 276 DAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL 348 (358)
Q Consensus 276 ~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~h--K~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~~f~g~ 348 (358)
+++|++||.|+||+.|....|. ++. ..|+.++|+| |.+.+..||+|+++++ ++.+++......|.
T Consensus 137 ~~~~i~lIeD~a~a~g~~~~g~---~~G~~gd~~~fSf~~~K~i~~geGG~v~~~~~-----~~~~~~~~~~~~g~ 204 (363)
T PF01041_consen 137 RKHGIPLIEDAAQAFGARYKGR---PVGSFGDIAIFSFHPTKIITTGEGGAVVTNDP-----ELAERARALRNHGR 204 (363)
T ss_dssp HHTT-EEEEE-TTTTT-EETTE---ETTSSSSEEEEESSTTSSS-SSS-EEEEESTH-----HHHHHHHHHTBTTE
T ss_pred HHcCCcEEEccccccCceeCCE---eccCCCCceEecCCCCCCCcCCCCeeEEecHH-----HHHHHhhhhhccCc
Confidence 9999999999999999776553 233 5799999987 9898889999999998 88888877655554
No 17
>PLN02651 cysteine desulfurase
Probab=99.84 E-value=8.6e-20 Score=179.26 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=142.7
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~a 187 (358)
++..++++.|++++...+.+.+ ++|+. .+..+.+..+.+++ +++++++++|+++++ .+++.++|.|++.++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~~---v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVEK-ARAQVAALIGADPKE---IIFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHHH-HHHHHHHHhCCCCCe---EEEeCCHHHHHHHHHHH
Confidence 5667899999999988776544 44543 12223333344544 789999999998642 34455667788877655
Q ss_pred h----ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 188 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 188 l----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
+ .++||+|++.+.+|.+.... +..+...|..++ .++++ +++.+|++++++.+++ +++++++...+
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~-----~~~~~~~g~~v~--~v~~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~ 150 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDS-----CRHLQQEGFEVT--YLPVK-SDGLVDLDELAAAIRP-DTALVSVMAVNNE 150 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHH-----HHHHHhcCCEEE--EEccC-CCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence 4 57899999988766553221 112223455444 44455 3578999999999865 68888776544
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|++|.. +..++ ++|++++|+||| .||.| |+++.+++
T Consensus 151 tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~-----~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~ 215 (364)
T PLN02651 151 IGVIQPVEEIGELCREKKVLFHTDAAQAVGKI-----PVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRR 215 (364)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhhCCc-----ccCcccCCCCEEEechhhh-CCCCceEEEEEcCC
Confidence 56789999999999999999999999998754 22333 899999999996 78987 88888874
No 18
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.84 E-value=1.6e-19 Score=176.10 Aligned_cols=197 Identities=18% Similarity=0.107 Sum_probs=141.9
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a 184 (358)
++++|++..++++|++++...+. ++ +| .. ..++.+.+++++++++|++..+ ..+.+.||++|+..+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~-----~~---~~---~~-~~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPML-----GH---RS---PE-FLALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCcc-----CC---CC---HH-HHHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence 47899999999999999965331 11 11 11 2233444678899999995432 234566789999999
Q ss_pred HHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--C
Q 018300 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--Y 262 (358)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~ 262 (358)
+.+++++||+|++.++.|.+ ..+. ..+...|..+. .+++++ ++.+|++++++.++.+++++|++..++ +
T Consensus 67 ~~~~~~~g~~vl~~~~~~~~---~~~~---~~~~~~g~~~~--~v~~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~ 137 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGVFG---DRWA---DMAERYGADVD--VVEKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETST 137 (356)
T ss_pred HHHhCCCCCEEEEecCCchh---HHHH---HHHHHhCCCeE--EeecCC-CCCCCHHHHHHHHhccCCCEEEEeccCCCc
Confidence 99999999999998753332 1110 12334565444 444553 468999999998875578988775543 5
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC-C-CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl-~-gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|...|+++|.++|+++|+++++|++|++|.. +.++ . ++|++++|+||+|++|.| |+++.+++
T Consensus 138 G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~-----~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~ 202 (356)
T cd06451 138 GVLNPLEGIGALAKKHDALLIVDAVSSLGGE-----PFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSER 202 (356)
T ss_pred ccccCHHHHHHHHHhcCCEEEEeeehhccCc-----cccccccCccEEEecCchhccCCCCcceeEECHH
Confidence 6789999999999999999999999987643 1122 2 789999999999999877 88888763
No 19
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=3.5e-19 Score=176.30 Aligned_cols=198 Identities=18% Similarity=0.190 Sum_probs=144.4
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pG 192 (358)
.++..++++...+.+.+. +.| +.+.++|+ ++++++|+++ .+.++|||.|+.+++.++ ++||
T Consensus 12 ~~~~e~~~~~~~l~~~~~--------~~g-~~~~~le~----~la~~~g~~~-----~v~~~sgt~al~lal~al~~~~G 73 (379)
T PRK11658 12 MGDEELAAVKEVLRSGWI--------TTG-PKNQALEQ----AFCQLTGNQH-----AIAVSSATAGMHITLMALGIGPG 73 (379)
T ss_pred CCHHHHHHHHHHHHcCCc--------cCC-HhHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCC
Confidence 345556666666543221 112 34556665 4788999976 366789999999999999 8999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHH
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~ 272 (358)
|+|+++++.|.++.. .+...|. +++.+++++++..+|++++++.+.+ ++|+|+..+ .+|...|+++|.
T Consensus 74 d~Viv~~~~~~~~~~--------~~~~~G~--~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~~-~~G~~~d~~~i~ 141 (379)
T PRK11658 74 DEVITPSLTWVSTLN--------MIVLLGA--TPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPVH-YAGAPADLDAIR 141 (379)
T ss_pred CEEEECCCcHHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEeC-CCCCcCCHHHHH
Confidence 999999876655421 2345565 5566667766677999999998864 788887543 367889999999
Q ss_pred HHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhhccCCc
Q 018300 273 QIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG 347 (358)
Q Consensus 273 ~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~~f~g 347 (358)
++|+++|+++++|++|+.|....+...... +.++++++.+|.|.+++||+++++++ ++.+++......|
T Consensus 142 ~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~-----~~~~~~~~~~~~G 210 (379)
T PRK11658 142 AIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD-----ELADRLRSLKFHG 210 (379)
T ss_pred HHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH-----HHHHHHHHHHHcC
Confidence 999999999999999999877654321111 56777888889999999999999876 6777666544333
No 20
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.83 E-value=3.1e-19 Score=177.88 Aligned_cols=205 Identities=16% Similarity=0.160 Sum_probs=148.7
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
.+.++|++..+++.|++++...+..+ .+..+.+ +.+.++++++++||++..+ +.+++.+||.++..
T Consensus 10 ~~l~~pGP~~~~~~V~~a~~~~~~~~-----------~~~~~~~-~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~ 75 (401)
T PLN02409 10 NHLFVPGPVNIPERVLRAMNRPNEDH-----------RSPAFPA-LTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWES 75 (401)
T ss_pred ceeccCCCCCCCHHHHHHhcCCCCCC-----------CCHHHHH-HHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHHH
Confidence 34677999999999999997544221 1223333 4445788999999997532 35667788899999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---cCCeEEEEcCC
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGAS 260 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---~~~klIi~~~s 260 (358)
++.++++|||+|+++++. |++..+. ..+...|..+..++ .+. +..+|++++++.++. .++|+|++.++
T Consensus 76 a~~~~~~~Gd~Vlv~~~~---~~~~~~~---~~~~~~g~~v~~v~--~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~ 146 (401)
T PLN02409 76 ALTNTLSPGDKVVSFRIG---QFSLLWI---DQMQRLNFDVDVVE--SPW-GQGADLDILKSKLRQDTNHKIKAVCVVHN 146 (401)
T ss_pred HHHhcCCCCCEEEEeCCC---chhHHHH---HHHHHcCCceEEEE--CCC-CCCCCHHHHHHHHhhCcCCCccEEEEEee
Confidence 999999999999998853 3333221 12334565444444 443 235899999998875 36888877654
Q ss_pred --CCCCCCCHHHHHHH--HHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCch
Q 018300 261 --AYPRDFDYPRMRQI--ADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (358)
Q Consensus 261 --~~~~~~dl~~I~~i--a~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~ 333 (358)
.+|...|+++|.++ |+++|+++++|++|++|.. +..++ ++|++++|+||||.||.| |+++.++
T Consensus 147 ~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~-----~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~----- 216 (401)
T PLN02409 147 ETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGAL-----DFRMDEWGVDVALTGSQKALSLPTGLGIVCASP----- 216 (401)
T ss_pred cccccccCCHHHHHHHHhhhccCcEEEEEcccccCCc-----cccccccCccEEEEcCccccCcCCCcceeEECH-----
Confidence 36778999999999 9999999999999987643 33333 799999999999999887 8888776
Q ss_pred hHHHHHHhh
Q 018300 334 VELESAINN 342 (358)
Q Consensus 334 ~~~~~~i~~ 342 (358)
++.+++..
T Consensus 217 -~~~~~~~~ 224 (401)
T PLN02409 217 -KALEASKT 224 (401)
T ss_pred -HHHHHHhc
Confidence 45555543
No 21
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.82 E-value=5.5e-19 Score=174.60 Aligned_cols=173 Identities=19% Similarity=0.189 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceE
Q 018300 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (358)
Q Consensus 146 ~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~ 224 (358)
.+++|+ .+++++|.++ .+.++||+.|+..++.++ ++|||+|+++++.+.++. ..+...|.
T Consensus 31 ~~~le~----~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~--------~~~~~~G~-- 91 (380)
T TIGR03588 31 VPAFEE----ALAEYVGAKY-----AVAFNSATSALHIACLALGVGPGDRVWTTPITFVATA--------NCALYCGA-- 91 (380)
T ss_pred HHHHHH----HHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH--------HHHHHcCC--
Confidence 445554 5788999976 356789999999999999 899999999987654431 13344565
Q ss_pred EEEeceecCCCCCCCHHHHHHHhhh---cCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCC
Q 018300 225 ESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (358)
Q Consensus 225 ~~~~~~~~~~~~~iD~d~le~~i~~---~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p 301 (358)
+++.++++++++.+|++++++.++. .++++|++.. .+|...|+++|.++|+++|++|++|++|+.|....+.....
T Consensus 92 ~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~-~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~ 170 (380)
T TIGR03588 92 KVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD-FAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGN 170 (380)
T ss_pred EEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC-CCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCC
Confidence 5666667766778999999998863 3678877543 36778899999999999999999999999986543321111
Q ss_pred CCCCcEEEEcCc--CcCccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 302 FKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 302 l~gaDiv~~S~h--K~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
.+++|+.++|+| |++.++.||+++++++ ++.+++...
T Consensus 171 ~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~-----~~~~~~~~~ 209 (380)
T TIGR03588 171 CRYADATVFSFHPVKIITTAEGGAVTTNDE-----ELAERMRLL 209 (380)
T ss_pred ccccceEEEecCCCCcccccCceEEEECCH-----HHHHHHHHH
Confidence 124599999998 8898889999999887 677766553
No 22
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.82 E-value=4.9e-19 Score=175.57 Aligned_cols=201 Identities=13% Similarity=0.089 Sum_probs=139.9
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
++-|.--.++++++++++..... .+ +.|.. .+..+......++ .+++.+++++|++.. +++++|+.|+.+
T Consensus 23 ~~~~~~~~p~~~~~~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~~-~l~~~lA~~~g~~~~-----~~~~g~t~a~~~ 93 (387)
T PRK09331 23 LDPIQRGGILTPEARKALIEYGD-GY--SVCDYCPGRLDQIKKPPIA-DFHEDLAEFLGMDEA-----RVTHGAREGKFA 93 (387)
T ss_pred cChhhcCCCCCHHHHHHHHHHHh-cc--CCCcccccccccccChHHH-HHHHHHHHHhCCCcE-----EEeCCHHHHHHH
Confidence 34445567889999999987763 22 23221 1111211111233 356778999999762 446778889999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec-CCCCCCCHHHHHHHhhhc------CCeEEE
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF------RPKLII 256 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~iD~d~le~~i~~~------~~klIi 256 (358)
++.+++++||+|++..+ +|++.. ..+...|..+ +.++.+ .+++.+|++++++.++.. ++++|+
T Consensus 94 al~~l~~~gd~Vlv~~~---~h~s~~-----~~~~~~G~~~--~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~ 163 (387)
T PRK09331 94 VMHSLCKKGDYVVLDGL---AHYTSY-----VAAERAGLNV--REVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALAL 163 (387)
T ss_pred HHHHhcCCCCEEEECCC---chHHHH-----HHHHHcCCEE--EEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEE
Confidence 99999999999999876 443321 1234556644 444442 135679999999988642 578888
Q ss_pred EcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccC-cEEEEEEeCC
Q 018300 257 AGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP-RGGMIFFKKD 329 (358)
Q Consensus 257 ~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp-~GG~I~~~~~ 329 (358)
+..++ +|...|+++|.++|+++|+++++|++|+.|.. |.+.. ++|++++|+||+|++| ++|+++++++
T Consensus 164 l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~-----~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~ 236 (387)
T PRK09331 164 LTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRM-----PVDGKKLGADFIVGSGHKSMAASAPSGVLATTEE 236 (387)
T ss_pred EECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCc-----CCCHHHcCCCEEEeeCcccccCCCCEEEEEECHH
Confidence 76544 56788999999999999999999999997743 22222 7999999999999776 4688888763
No 23
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.82 E-value=3.9e-19 Score=175.21 Aligned_cols=200 Identities=19% Similarity=0.258 Sum_probs=144.4
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
++..++++.|++++...+.+. .|+|+..+..+.+..+.+++ +++++++++|+++++ .++..+||.|+..++.++
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~~---i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEE-AREQVAKLLGAEPDE---IIFTSGGTESDNTAIKSA 79 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHH-HHHHHHHHhCCCCCe---EEEeCcHHHHHHHHHHHH
Confidence 567788999999998877643 36666433223344455554 789999999998642 344557788999888876
Q ss_pred c---cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CC
Q 018300 189 L---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YP 263 (358)
Q Consensus 189 l---~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~ 263 (358)
+ ++||+|++.+.+|.++.... ..+...|..+.. ++++ +++.+|++++++.+++ +++++++...+ +|
T Consensus 80 ~~~~~~~~~vv~~~~~~~s~~~~~-----~~~~~~G~~v~~--v~~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG 150 (379)
T TIGR03402 80 LAAQPEKRHIITTAVEHPAVLSLC-----QHLEKQGYKVTY--LPVD-EEGRLDLEELRAAITD-DTALVSVMWANNETG 150 (379)
T ss_pred HHhcCCCCeEEEcccccHHHHHHH-----HHHHHcCCEEEE--EccC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCee
Confidence 3 56789998887765543221 122234654444 4454 3568999999999864 78888775444 46
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 264 ~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+|| +.||.| |+++.+++
T Consensus 151 ~~~~~~~I~~l~~~~g~~vivD~~~~~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~ 213 (379)
T TIGR03402 151 TIFPIEEIGEIAKERGALFHTDAVQAVGKI-----PIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKG 213 (379)
T ss_pred ecccHHHHHHHHHHcCCEEEEECccccccc-----ccCcccCCCCEEEEcHHH-cCCCCceEEEEECCC
Confidence 789999999999999999999999987743 32333 89999999999 789998 88888764
No 24
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=6.5e-19 Score=175.19 Aligned_cols=226 Identities=19% Similarity=0.183 Sum_probs=159.1
Q ss_pred ccccc--ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HH
Q 018300 104 SLELI--ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (358)
Q Consensus 104 ~i~li--as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A 180 (358)
-|+|- .++..+|+.+++++...+.+... .|.. ..|.. ++++.+.+++.+.+|.+.+ ..-+|.+++|+ +|
T Consensus 30 vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~---~~G~~---~LReaia~~~~~~~~~~~~-~~~eiivt~Ga~~a 101 (393)
T COG0436 30 VIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTP---SAGIP---ELREAIAEKYKRRYGLDVD-PEEEIIVTAGAKEA 101 (393)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCeEEEeCCHHHH
Confidence 34444 44557899999999887765321 2211 23444 6888888899999886542 11347777766 59
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC--CCCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
+..++.++++|||+|++++|.|..|.. .+.+.|. +++++++++ ++..+|.++|++.+.+ ++|+|+++
T Consensus 102 l~~~~~a~~~pGDeVlip~P~Y~~y~~--------~~~~~gg--~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln 170 (393)
T COG0436 102 LFLAFLALLNPGDEVLIPDPGYPSYEA--------AVKLAGG--KPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILN 170 (393)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCC--EEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEe
Confidence 999999999999999999986655432 3456676 445555533 2569999999999987 89999999
Q ss_pred CCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCC-ccCCCC--CC-c--EEEEcCcCcC--ccCcEEEEE
Q 018300 259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--YC-D--VVTTTTHKSL--RGPRGGMIF 325 (358)
Q Consensus 259 ~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~pl~--ga-D--iv~~S~hK~L--~Gp~GG~I~ 325 (358)
.++||+ .. .+++|+++|++||++|++|+++ .++++.+. .++.++ .. | |++.|++|++ +|+|.|+++
T Consensus 171 ~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY-~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v 249 (393)
T COG0436 171 SPNNPTGAVYSKEELKAIVELAREHDIIIISDEIY-EELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVV 249 (393)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhh-hhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEee
Confidence 888875 33 4889999999999999999995 48888774 445444 32 3 7788999995 899999999
Q ss_pred Ee-CCCC-chhHHHHHHhhccCCccc
Q 018300 326 FK-KDPV-LGVELESAINNAVFPGLQ 349 (358)
Q Consensus 326 ~~-~~~~-~~~~~~~~i~~~~f~g~q 349 (358)
++ ++.+ .+..+.+.+..+.+...|
T Consensus 250 ~~~~~l~~~~~~~~~~~~~~~~~~~Q 275 (393)
T COG0436 250 GPPEELIAALRKLKSYLTSCAPTPAQ 275 (393)
T ss_pred cChHHHHHHHHHHHHhcccCCCHHHH
Confidence 98 4332 222344444444444444
No 25
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.81 E-value=9.8e-19 Score=171.62 Aligned_cols=202 Identities=17% Similarity=0.176 Sum_probs=144.2
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCc-CCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCCHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYT 186 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r-~~~G~~~~~~lE~~~~~~la~lfg~~-~~~~~v~V~~~SGt~A~~~a~~ 186 (358)
.+..++|+.+++++...+...+ ++|.+. +..+....+.++ .++++++++||++ +. ..++++++|.|+..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~---~v~~~~g~t~a~~~~~~ 79 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAYE-AAREKVARFINAPSPD---EIIFTRNTTEAINLVAY 79 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHHH-HHHHHHHHHhCCCCCC---eEEEeCCHHHHHHHHHH
Confidence 5677899999999988775543 344331 222333334444 4788899999998 43 12344566779999999
Q ss_pred Hhcc---CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 187 AILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 187 all~---pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
++.. |||+|+++++.|.++..... ......|..+..+ +++ +++.+|++++++.+.+ ++++|++..++
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~~~~~~~~----~~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~ 151 (373)
T cd06453 80 GLGRANKPGDEIVTSVMEHHSNIVPWQ----QLAERTGAKLKVV--PVD-DDGQLDLEALEKLLTE-RTKLVAVTHVSNV 151 (373)
T ss_pred HhhhcCCCCCEEEECcchhHHHHHHHH----HHHhhcCcEEEEe--ecC-CCCCcCHHHHHHHhcC-CceEEEEeCcccc
Confidence 9876 99999999887665421110 1122446544444 455 4578999999998865 78888876554
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
.|...|+++|.++|+++|++|++|++|+.|.. +.++. ++|++++|+||++++++.|+++++++
T Consensus 152 tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~ 216 (373)
T cd06453 152 LGTINPVKEIGEIAHEAGVPVLVDGAQSAGHM-----PVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEE 216 (373)
T ss_pred cCCcCCHHHHHHHHHHcCCEEEEEhhhhcCce-----eeeccccCCCEEEeccccccCCCCcEEEEEchH
Confidence 46788999999999999999999999987654 22232 79999999999998766688888764
No 26
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.81 E-value=8.3e-19 Score=174.70 Aligned_cols=200 Identities=17% Similarity=0.190 Sum_probs=143.0
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCC-CHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLS-GSPANFEVY 185 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~~-~~~~~v~V~~~S-Gt~A~~~a~ 185 (358)
++..++++.|++++...+...+. ++.. .+..+.+..+.+++ +|+.+++++|+. ++ +|.+++ +|+++..++
T Consensus 30 a~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~----~v~~t~g~t~~l~~~~ 102 (406)
T PRK09295 30 AASAQKPSQVIDAEAEFYRHGYA--AVHRGIHTLSAQATEKMEN-VRKQAALFINARSAE----ELVFVRGTTEGINLVA 102 (406)
T ss_pred cccccCCHHHHHHHHHHHHhcCC--CCCCcccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHHH
Confidence 66778899999999887765442 2221 23334455566665 789999999984 43 344454 566888888
Q ss_pred HH----hccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 018300 186 TA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (358)
Q Consensus 186 ~a----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~ 261 (358)
.+ +++|||+|++++++|.+...... ......|..+ ..++++ +++.+|++++++.+++ ++++|++...+
T Consensus 103 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~~v--~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~l~~~~ 174 (406)
T PRK09295 103 NSWGNSNVRAGDNIIISEMEHHANIVPWQ----MLCARVGAEL--RVIPLN-PDGTLQLETLPALFDE-RTRLLAITHVS 174 (406)
T ss_pred HHhhhhcCCCcCEEEECcchhhHHHHHHH----HHHHHcCcEE--EEEecC-CCCCCCHHHHHHhcCC-CcEEEEEecch
Confidence 76 46899999999887765422111 1123446544 444455 3567999999998864 78988876554
Q ss_pred --CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 --~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+|| +.||.| |+++.+++
T Consensus 175 n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G~G~l~~~~~ 241 (406)
T PRK09295 175 NVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHH-----PVDVQALDCDFYVFSGHK-LYGPTGIGILYVKEA 241 (406)
T ss_pred hcccccCCHHHHHHHHHHcCCEEEEEcccccCcc-----ccCchhcCCCEEEeehhh-ccCCCCcEEEEEchH
Confidence 46789999999999999999999999987753 22333 79999999999 678887 88888773
No 27
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.81 E-value=1.1e-18 Score=173.29 Aligned_cols=200 Identities=21% Similarity=0.252 Sum_probs=144.0
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEe-CCCHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQP-LSGSPANFEVY 185 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~-~~~~~~v~V~~-~SGt~A~~~a~ 185 (358)
++..++|+.|++++...+.+.+ +++.+ .+..+....+.+++ +|+.+++++|+ +++ +|.+ .|+|+++..++
T Consensus 26 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~~----~i~~~~~~t~~i~~~~ 98 (401)
T PRK10874 26 AATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYEA-AREQVAQLLNAPDAK----NIVWTRGTTESINLVA 98 (401)
T ss_pred CcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHHH-HHHHHHHHcCCCCCC----EEEEECCHHHHHHHHH
Confidence 6677889999999988876543 44432 22234445555655 78999999999 443 3444 45567999998
Q ss_pred HHh----ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 018300 186 TAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (358)
Q Consensus 186 ~al----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~ 261 (358)
.++ ++|||+|++++++|.+.+.... ......|..+..+ +++ +++.+|++++++.+.+ ++++|++..++
T Consensus 99 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~~v~~v--~~~-~~~~~d~~~l~~~i~~-~t~lv~i~~~~ 170 (401)
T PRK10874 99 QSYARPRLQPGDEIIVSEAEHHANLVPWL----MVAQQTGAKVVKL--PLG-ADRLPDVDLLPELITP-RTRILALGQMS 170 (401)
T ss_pred HHhhhccCCCcCEEEECCcchHHHHHHHH----HHHHHhCCEEEEE--ecC-CCCcCCHHHHHHhcCc-CcEEEEEeCCc
Confidence 887 4899999999987665322110 1123456644444 454 3568999999998864 78988876554
Q ss_pred --CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 --~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+|| +.||.| |+++.+++
T Consensus 171 n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~ 237 (401)
T PRK10874 171 NVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHF-----PADVQALDIDFYAFSGHK-LYGPTGIGVLYGKSE 237 (401)
T ss_pred ccccCcCCHHHHHHHHHHcCCEEEEECCcccccc-----cCCchhcCCCEEEEeccc-ccCCCccEEEEEchH
Confidence 46788999999999999999999999987654 22233 79999999999 568887 88887763
No 28
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.81 E-value=1.4e-18 Score=171.80 Aligned_cols=197 Identities=21% Similarity=0.249 Sum_probs=142.4
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~-~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.+|.|++++...+.. +..||++.++..|. +...+ .++.+++++|.+. .+.++||+.|+..++.++++||
T Consensus 53 ~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~----le~~ia~~~g~~~-----~ii~~~~~~a~~~~~~~l~~~g 122 (393)
T TIGR01822 53 SHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKE----LEAKIAAFLGTED-----TILYASCFDANGGLFETLLGAE 122 (393)
T ss_pred CCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHH----HHHHHHHHhCCCc-----EEEECchHHHHHHHHHHhCCCC
Confidence 488899998887754 33478888888785 33333 4556899999865 3667899999999999999999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---c--CCeEEEEcCC--CCCCC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RPKLIIAGAS--AYPRD 265 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---~--~~klIi~~~s--~~~~~ 265 (358)
|+|++.++.|.++.. .+...+.. .+.+ ..+|++++++.+++ . ++++|+++.. .+|..
T Consensus 123 d~vi~~~~~~~s~~~--------~~~~~~~~--~~~~------~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~ 186 (393)
T TIGR01822 123 DAIISDALNHASIID--------GVRLCKAK--RYRY------ANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVI 186 (393)
T ss_pred CEEEEeccccHHHHH--------HHHhcCCc--eEEe------CCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCc
Confidence 999999887665432 22233331 1221 24789999988764 2 5678877643 35667
Q ss_pred CCHHHHHHHHHHcCCEEEEeccccccccccC-C--cc-CCCC-CCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHH
Q 018300 266 FDYPRMRQIADAVGALLMMDMAHISGLVAAS-V--VA-DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (358)
Q Consensus 266 ~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g-~--~~-~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i 340 (358)
.|+++|.++|+++|++|++|++|+.|..... . .+ ..+. ++|++++|+||+|+|+++|++++++ ++.+.+
T Consensus 187 ~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~~~------~~~~~l 260 (393)
T TIGR01822 187 APLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTARK------EVVELL 260 (393)
T ss_pred CCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEeCH------HHHHHH
Confidence 8999999999999999999999987765321 1 00 1122 6899999999999999999999876 455555
Q ss_pred hh
Q 018300 341 NN 342 (358)
Q Consensus 341 ~~ 342 (358)
..
T Consensus 261 ~~ 262 (393)
T TIGR01822 261 RQ 262 (393)
T ss_pred HH
Confidence 44
No 29
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.81 E-value=1.7e-18 Score=169.99 Aligned_cols=198 Identities=20% Similarity=0.276 Sum_probs=136.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCCHHHHHHHHHHhcc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTAILK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~-~SGt~A~~~a~~all~ 190 (358)
++|+.|++++.+.+.+.. +.++. .|..+......++ .+++++++++|++..+ +|.+ .++++++..++.++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~ 84 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREVE-ETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLK 84 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHHH-HHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccC
Confidence 467899999987765432 12221 1111111122333 3678899999987531 3444 4677899999999999
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CCCCCCH
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YPRDFDY 268 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~~~~dl 268 (358)
+||+|++.+++|+++..... ......|. ++..++.+ +++.+|++++++.+++ ++++|++..++ +|...|+
T Consensus 85 ~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 85 EGDHVITTPMEHNSVARPLE----CLKEQIGV--EITIVKCD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred CCCEEEECcchhhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCH
Confidence 99999998876655421100 01123354 44444455 3568999999998864 78888776544 5678999
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 269 ~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
++|.++|+++|+++++|++|++|... ..+. ++|++++|+||||.||.| |+++.+++
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~-----~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~ 215 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIP-----IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREG 215 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccC-----CCchhcCCCEEEecccccccCCCCceEEEEcCC
Confidence 99999999999999999999988652 2232 899999999999999987 66665554
No 30
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.81 E-value=1.5e-18 Score=171.84 Aligned_cols=201 Identities=21% Similarity=0.275 Sum_probs=139.1
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCCHHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTA 187 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~-~SGt~A~~~a~~a 187 (358)
++...+|+.|++++.+.+.... ..++..|.. .....++.+.+++.+++++|+++. +|.+ .+++.++..++.+
T Consensus 24 ~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~l~~~ia~~~~~~~~----~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 24 PAGTQIPQSVADAVSAALTRSN--ANRGGAYES-SRRADQVVDDAREAVADLLNADPP----EVVFGANATSLTFLLSRA 96 (397)
T ss_pred CccCCCCHHHHHHHHHHHHhcC--CCCCCCchH-HHHHHHHHHHHHHHHHHHcCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 7777899999999988775432 122222211 112223334478889999999864 2444 4556677766666
Q ss_pred h---ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--C
Q 018300 188 I---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--Y 262 (358)
Q Consensus 188 l---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~ 262 (358)
+ ++|||+|++++++|.++... +. ..+...|..+ ..++++++++.+|++++++.+.+ ++++|++..++ +
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~-~~---~~~~~~g~~~--~~~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~t 169 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISP-WL---QAAERAGAKV--KWARVDEATGELHPDDLASLLSP-RTRLVAVTAASNTL 169 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHH-HH---HHHHhcCCEE--EEEeccccCCCcCHHHHHHhcCC-CceEEEEeCCCCCC
Confidence 4 78999999998876654321 10 1223456544 44445544578999999998864 68888876544 4
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||++ ||+.|+++.+++
T Consensus 170 G~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~~G~l~~~~~ 232 (397)
T TIGR01976 170 GSIVDLAAITELVHAAGALVVVDAVHYAPHG-----LIDVQATGADFLTCSAYKFF-GPHMGILWGRPE 232 (397)
T ss_pred CccCCHHHHHHHHHHcCCEEEEehhhhcccc-----CCCHHHcCCCEEEEechhhc-CCceEEEEEcHH
Confidence 6788999999999999999999999976532 22232 7999999999987 788999998873
No 31
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.81 E-value=1.5e-18 Score=172.20 Aligned_cols=201 Identities=18% Similarity=0.181 Sum_probs=142.0
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCCHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYT 186 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~~-~~~~~v~V~~~SGt~A~~~a~~ 186 (358)
++..++|+.|++++...+...+ +++.. .+..+.+..+.+++ +|+.+++++|++ +++ .+++.++|+++..++.
T Consensus 23 a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~~~---i~~t~g~t~~l~~~~~ 96 (398)
T TIGR03392 23 AATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYEL-ARQQVARFLNAPDAEN---IVWTRGTTESINLVAQ 96 (398)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHH-HHHHHHHHhCCCCCCe---EEEeCChHHHHHHHHH
Confidence 6666889999999988775443 34432 23334444445555 789999999995 431 2344456679999998
Q ss_pred Hh----ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 187 AI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 187 al----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
++ ++|||+|++++++|.+.+.... ..+...|.. ++.+++++ ++.+|++++++.+.+ ++++|++..++
T Consensus 97 ~~~~~~~~~gd~Vl~~~~~~~s~~~~~~----~~~~~~g~~--v~~v~~~~-~~~~~~~~l~~~i~~-~t~lv~i~~~~n 168 (398)
T TIGR03392 97 SYARPRLQPGDEIIVSEAEHHANLIPWL----MVAQQTGAK--VVKLPIGA-DLLPDIRQLPELLTP-RTRILALGQMSN 168 (398)
T ss_pred HhhhccCCCCCEEEECCcchhHHHHHHH----HHHHHcCcE--EEEEecCC-CCCcCHHHHHHHhcc-CceEEEEECccc
Confidence 87 5899999999987765322110 112345654 44444553 467899999998864 78988876544
Q ss_pred -CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 -~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+|| +.||.| |+++.+++
T Consensus 169 ~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-----~~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~ 234 (398)
T TIGR03392 169 VTGGCPDLARAITLAHQYGAVVVVDGAQGVVHG-----PPDVQALDIDFYAFSGHK-LYGPTGIGVLYGKTE 234 (398)
T ss_pred cccccCCHHHHHHHHHHcCCEEEEEhhhhcCCC-----CCChhhcCCCEEEEeccc-ccCCCceEEEEEcHH
Confidence 46788999999999999999999999987643 22222 78999999999 567877 88887763
No 32
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.80 E-value=1.8e-18 Score=168.84 Aligned_cols=199 Identities=20% Similarity=0.254 Sum_probs=141.7
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCC-CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYT 186 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~-~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~ 186 (358)
++..++++.|++++...+.+.+ ++|+.+.+ .+....+.+++ +++++++++|++++ +|.+++| |.|+..++.
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~ 77 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVER-ARKQVAEALGADTE----EVIFTSGATESNNLAIL 77 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHHH-HHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHH
Confidence 4566889999999988775543 45654322 13333344444 78899999999874 3445554 669998888
Q ss_pred Hhc----cCC-CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 018300 187 AIL----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (358)
Q Consensus 187 all----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~ 261 (358)
++. ++| |+|++.+.+|.++.... ..+...|. ++..++++ +++.+|++++++.++. ++++|++...+
T Consensus 78 ~l~~~~~~~g~~~vi~~~~~~~s~~~~~-----~~~~~~G~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~ 148 (353)
T TIGR03235 78 GLARAGEQKGKKHIITSAIEHPAVLEPI-----RALERNGF--TVTYLPVD-ESGRIDVDELADAIRP-DTLLVSIMHVN 148 (353)
T ss_pred HHHHhcccCCCCeeeEcccccHHHHHHH-----HHHHhcCC--EEEEEccC-CCCcCCHHHHHHhCCC-CCEEEEEEccc
Confidence 875 366 78888877665543221 12233455 44444455 3578999999998864 68888776544
Q ss_pred --CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 --~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +..++ ++|++++|+||+ .||.| |+++.+++
T Consensus 149 n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~ 215 (353)
T TIGR03235 149 NETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKI-----TVDLSADRIDLISCSGHKI-YGPKGIGALVIRKR 215 (353)
T ss_pred CCceeccCHHHHHHHHHHcCCEEEEEchhhcCCc-----cccccccCCCEEEeehhhc-CCCCceEEEEEccC
Confidence 46788999999999999999999999998865 22333 799999999997 57887 88888875
No 33
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=6.7e-19 Score=174.75 Aligned_cols=188 Identities=24% Similarity=0.233 Sum_probs=136.9
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.+.|| |++..+.+|+. +++++|.+. .+.+.||+.|+..++.+++++||+|+++++.|++.+....
T Consensus 44 ~~~Y~R~--~npt~~~Le~~----lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~-- 110 (388)
T PRK08861 44 KYDYTRS--GNPNRGLLEQT----LSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFN-- 110 (388)
T ss_pred CccccCC--CCchHHHHHHH----HHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHH--
Confidence 3445554 55666777764 788999754 3566788899999999999999999999887776432100
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
......| +++..+ + ..|++++++.+.+ ++|+|++..+++| ...|+++|.++|+++|+++++|++|+.
T Consensus 111 --~~~~~~g--i~v~~v--d----~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~ 179 (388)
T PRK08861 111 --TRANKGD--FKVQFV--D----QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLT 179 (388)
T ss_pred --HHHhcCC--eEEEEE--C----CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccc
Confidence 0011122 344443 2 3588999988764 7899998777664 688999999999999999999999987
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhhc-cCCcccccccc
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA-VFPGLQVGFVS 354 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~~-~f~g~q~~~~~ 354 (358)
++. ..|++ |+|++++|+||+++||. ||+++++++ ++.+++... ...|..-+|+.
T Consensus 180 ~~~-----~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~-----~~~~~~~~~~~~~G~~~~p~~ 238 (388)
T PRK08861 180 PVL-----QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTK-----EHAEELAWWGNCIGATGTPFD 238 (388)
T ss_pred ccc-----CCCcccCCCEEEeecceeccCCCcceeEEEEecHH-----HHHHHHHHHHhccCCCCChHH
Confidence 643 35677 99999999999999985 688888765 676766543 33455555554
No 34
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.80 E-value=2.9e-18 Score=168.88 Aligned_cols=183 Identities=17% Similarity=0.166 Sum_probs=129.2
Q ss_pred CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc
Q 018300 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK 190 (358)
Q Consensus 111 ~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~ 190 (358)
-+++|+.|++++.....+ | + + .+++.+.++++++++||.+. .+.+.+||.|+++++.++++
T Consensus 22 ~s~~~~~v~~a~~~~~~~-~---------~-~---~~~~~~~~~~~~a~~~g~~~-----~~~~~g~t~al~~al~al~~ 82 (363)
T TIGR01437 22 VSTVSDEVADAQKRGAQN-Y---------F-E---IKELVNKTGEYIANLLGVED-----AVIVSSASAGIAQSVAAVIT 82 (363)
T ss_pred CCCCCHHHHHHHHHHHhc-C---------C-C---HHHHHHHHHHHHHHhhCCCe-----EEEEcCHHHHHHHHHHHHhc
Confidence 455799999999876532 2 1 1 12445557788999999875 25677888999999999999
Q ss_pred CCC---------------EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEE
Q 018300 191 PHD---------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (358)
Q Consensus 191 pGD---------------~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klI 255 (358)
+|| +|+++.+ |..++...+ ...+.+.|. ++++++++ +.+|++++++.+.+ ++|+|
T Consensus 83 ~Gd~~~~~~~~~s~~~~~eVi~~~~-~~~~~~~~~---~~~~~~~g~--~~v~v~~~---~~~d~~~le~ai~~-~t~ai 152 (363)
T TIGR01437 83 RGNRYLVENLHDSKIEVNEVVLPKG-HNVDYGAPV---ETMVRLGGG--KVVEAGYA---NECSAEQLEAAITE-KTAAI 152 (363)
T ss_pred CCCcchhhcccccccccceEEEECc-cchhcCCch---HHHHHhcCC--eEEEEcCC---CCCCHHHHHHhcCh-hceEE
Confidence 998 7777552 111110000 012344565 44554442 46999999999875 67866
Q ss_pred E-EcC-CC-CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCccCcEEEEEEeC
Q 018300 256 I-AGA-SA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 256 i-~~~-s~-~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~ 328 (358)
+ ++. ++ ++...|+++|.++|+++|+++++|++|...+ ..... ++|++++|+||+|+||++|++++++
T Consensus 153 ~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~ 223 (363)
T TIGR01437 153 LYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKK 223 (363)
T ss_pred EEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcH
Confidence 5 333 33 4568899999999999999999999997322 11123 7899999999999999999988865
No 35
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.80 E-value=5.1e-19 Score=169.21 Aligned_cols=165 Identities=19% Similarity=0.166 Sum_probs=119.7
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
++++++++||++.. .+.++++|.|+.+++.++++|||+|++..+.|.++. ..+...|.....++.+.+
T Consensus 64 ~~~~~A~~~ga~~~----~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~--------~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 64 AQELAARAFGAKHT----FFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVI--------NGLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHhCCCCE----EEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHH--------HHHHHCCCEEEEecCccC
Confidence 56678999998762 333445567999999999999999999887544332 133456664444443333
Q ss_pred CC---CCCCCHHHHHHHhhh-cCCeEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCC-CC-CC
Q 018300 233 ES---TGLVDYDMLEKTAIL-FRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK-YC 305 (358)
Q Consensus 233 ~~---~~~iD~d~le~~i~~-~~~klIi~~~s~-~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p-l~-ga 305 (358)
++ .+.+|++++++.+++ .++|+|++..++ +|...|+++|.++|+++|+++++|++|..++.+.+..+.. .. ++
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~ 211 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGA 211 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCC
Confidence 22 137999999998864 357887775444 5778999999999999999999999998765544433322 23 89
Q ss_pred cEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 306 DVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 306 Div~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|++++|+||+|+|+++ |++..+++
T Consensus 212 div~~S~hK~l~g~~~~~~l~~~~~ 236 (294)
T cd00615 212 DIVVQSTHKTLPALTQGSMIHVKGD 236 (294)
T ss_pred cEEEEchhcccchHhHHHHHHhCCC
Confidence 9999999999999865 67766664
No 36
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.79 E-value=3.3e-18 Score=170.39 Aligned_cols=200 Identities=19% Similarity=0.214 Sum_probs=139.6
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCC-CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~-~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~a 187 (358)
++..++++.|++++...+...+ ++|+.+.+ .+....+.++ .+++.+++++|+++++ .+++.++|.++..++.+
T Consensus 10 aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~---v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 10 AATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEAEEAVE-NARNQVAELIGADSRE---IVFTSGATESNNLAIKG 83 (402)
T ss_pred CcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCCe---EEEeCCHHHHHHHHHHH
Confidence 5667889999999988775543 44543211 1222223344 4788899999998742 24445666799988776
Q ss_pred h----ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 188 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 188 l----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
+ .++||+|++.+.+|.+.... +..+...|..+ ..++++ +++.+|++++++.+.+ ++++|++...+
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~-----~~~~~~~g~~v--~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~v~~~~n~ 154 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDT-----CRYLEREGFEV--TYLPPK-SNGLIDLEELKAAIRD-DTILVSIMHVNNE 154 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHH-----HHHHHhcCCEE--EEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECCCcC
Confidence 5 37899999998776554321 11122345544 444455 3578999999998864 67888776554
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|++|.. +..+. ++|++++|+||+ .||.| |+++.+++
T Consensus 155 tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~ 219 (402)
T TIGR02006 155 IGVIQDIAAIGEICRERKVFFHVDAAQSVGKI-----PINVNELKVDLMSISGHKI-YGPKGIGALYVRRK 219 (402)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhcCCc-----ccCccccCCCEEEEehhhh-cCCCceEEEEEccC
Confidence 46788999999999999999999999998754 22232 799999999995 57876 78777764
No 37
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=1.2e-18 Score=173.06 Aligned_cols=186 Identities=13% Similarity=0.062 Sum_probs=135.2
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc
Q 018300 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (358)
Q Consensus 134 ~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (358)
|.+.|. |++..+.+|+. ++++.|.+.+ +.+.||+.|+.+++.+++++||+|++++..|++.....
T Consensus 54 ~~YsR~--~nPt~~~le~~----la~LEg~~~a-----~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~---- 118 (395)
T PRK08114 54 LFYGRR--GTLTHFSLQEA----MCELEGGAGC-----ALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFC---- 118 (395)
T ss_pred ccccCC--CChhHHHHHHH----HHHHhCCCeE-----EEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHH----
Confidence 445443 78888888874 7888888763 66789999999999999999999999877776643211
Q ss_pred hhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcC--CEEEEecccc
Q 018300 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVG--ALLMMDMAHI 289 (358)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g--~~livD~Ah~ 289 (358)
...+...|. ++..++ ..|.+++++.+++ ++|+|+++.+.++ ...|+++|+++||++| +++++|++|+
T Consensus 119 ~~~l~~~Gi--~v~~vd------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a 189 (395)
T PRK08114 119 SKILSKLGV--TTTWFD------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWA 189 (395)
T ss_pred HHHHHhcCc--EEEEEC------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCc
Confidence 011223454 333332 2477899998864 7899999877765 4789999999999985 9999999998
Q ss_pred ccccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh-ccCCcccccccc
Q 018300 290 SGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN-AVFPGLQVGFVS 354 (358)
Q Consensus 290 ~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~-~~f~g~q~~~~~ 354 (358)
.++. ..|++ |+|++++|+||+|.|+. +|+++.++ ++.+++.. ....|..-+|+.
T Consensus 190 ~p~~-----~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~------~~~~~l~~~~~~~G~~~~p~~ 248 (395)
T PRK08114 190 AGVL-----FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA------RCWEQLRENSYLMGQMVDADT 248 (395)
T ss_pred cccc-----cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH------HHHHHHHHHHHhccCCCCHHH
Confidence 7754 35677 99999999999999994 57666554 44444443 233455556554
No 38
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.79 E-value=4e-18 Score=170.83 Aligned_cols=201 Identities=19% Similarity=0.192 Sum_probs=141.4
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCCHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYT 186 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~-~SGt~A~~~a~~ 186 (358)
++..++++.|++++...+...+. ++.. .++.+.+..+.+++ +|+.+++++|++..+ +|.+ .++|+++..++.
T Consensus 39 a~~~~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~---~v~~t~g~t~al~~i~~ 112 (424)
T PLN02855 39 AATSQKPAAVLDALQDYYEEYNS--NVHRGIHALSAKATDAYEL-ARKKVAAFINASTSR---EIVFTRNATEAINLVAY 112 (424)
T ss_pred ccccCCCHHHHHHHHHHHHhcCC--CCCCccchHHHHHHHHHHH-HHHHHHHHcCCCCCC---EEEEeCCHHHHHHHHHH
Confidence 56668899999999887654432 2221 22333344445554 789999999996321 3444 455678888887
Q ss_pred H----hccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 187 A----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 187 a----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
+ .++|||+|++++++|.+.+.. +. ......|..+ ..+++++ ++.+|++++++.++. ++++|++...+
T Consensus 113 ~~~~~~~~~gd~vl~~~~~~~s~~~~-~~---~~a~~~g~~v--~~v~~~~-~~~~~~~~l~~~i~~-~t~lv~i~~~~n 184 (424)
T PLN02855 113 TWGLANLKPGDEVILSVAEHHSNIVP-WQ---LVAQKTGAVL--KFVGLTP-DEVLDVEQLKELLSE-KTKLVATHHVSN 184 (424)
T ss_pred HhhhhcCCCcCEEEECCCccHHHHHH-HH---HHHHHcCCEE--EEEecCC-CCCcCHHHHHHHhcc-CceEEEEeCccc
Confidence 5 368999999999877654321 10 1123446544 4444553 356999999998864 78998887654
Q ss_pred -CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 -~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+|| +.||.| |+++.+++
T Consensus 185 ~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~ 250 (424)
T PLN02855 185 VLGSILPVEDIVHWAHAVGAKVLVDACQSVPHM-----PVDVQTLGADFLVASSHK-MCGPTGIGFLWGKSD 250 (424)
T ss_pred cccccCCHHHHHHHHHHcCCEEEEEhhhhcCCc-----CCCchhcCCCEEEeeccc-ccCCCccEEEEEchh
Confidence 46789999999999999999999999987743 22333 78999999999 678887 88888874
No 39
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.79 E-value=6.7e-18 Score=167.12 Aligned_cols=195 Identities=12% Similarity=0.070 Sum_probs=141.3
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pG 192 (358)
.++..++++...+...+. ++..+.+.++|+ ++++++|.+. .+.++|||.|+..++.++ ++||
T Consensus 9 ~~~~e~~a~~~~~~~~~~--------~~~g~~~~~~e~----~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~pG 71 (376)
T TIGR02379 9 VTGQELEYIAEAISEGKL--------SGDGPFSRRCET----WLENRTGTKK-----ALLTPSCTAALEMAALLLDIQPG 71 (376)
T ss_pred CCHHHHHHHHHHHHcCCc--------cCCcHHHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCc
Confidence 456667777776654321 111233445554 5778888875 366778899999998888 8999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHH
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~ 272 (358)
|+|+++++.+.+.. ..+...|. +++.+++++++..+|++++++.++. ++|+|+..+ .+|...|+++|.
T Consensus 72 d~Viv~~~t~~~~~--------~~~~~~G~--~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~-~~G~~~d~~~I~ 139 (376)
T TIGR02379 72 DEVIMPSYTFVSTA--------NAFVLRGA--KIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVH-YAGVACDMDTIM 139 (376)
T ss_pred CEEEECCCCcHHHH--------HHHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeC-CCCCccCHHHHH
Confidence 99999987655432 13344565 5666677776678999999998864 789887543 468889999999
Q ss_pred HHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCc--C-ccCcEEEEEEeCCCCchhHHHHHHhhccC
Q 018300 273 QIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKS--L-RGPRGGMIFFKKDPVLGVELESAINNAVF 345 (358)
Q Consensus 273 ~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~--L-~Gp~GG~I~~~~~~~~~~~~~~~i~~~~f 345 (358)
++|+++|++|++|++|+.|....+. ++. ..|+.++|+|++ + .|++||+|+++++ ++.+++.....
T Consensus 140 ~la~~~~i~vIeDaa~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~-----~~~~~~~~~~~ 208 (376)
T TIGR02379 140 ALANKHQLFVIEDAAQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQ-----AFIERAEIIRE 208 (376)
T ss_pred HHHHHCCCEEEEECccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCH-----HHHHHHHHHHH
Confidence 9999999999999999987644432 233 458888998854 4 5779999999876 77777765443
No 40
>PRK02948 cysteine desulfurase; Provisional
Probab=99.79 E-value=4.2e-18 Score=167.94 Aligned_cols=199 Identities=16% Similarity=0.204 Sum_probs=142.5
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTA 187 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~a 187 (358)
++..++++.|++++...+...+ +.++..+..+....+.++ .+++.+++++|++++ +|.+++| ++++..++.+
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSLLQ-VCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 5667889999999987776443 344444444444444454 478999999999864 3555555 7798888877
Q ss_pred hc----cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 188 IL----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 188 ll----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
++ ++||+|++.+.+|.++.... ..+...|..+. .++++ +++.+|++++++.+++ ++++|++..++
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~-----~~~~~~g~~v~--~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYF-----QSLESQGYTVT--EIPVD-KSGLIRLVDLERAITP-DTVLASIQHANSE 150 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHH-----HHHHhCCCEEE--EEeeC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence 75 67999999887665543211 12334565444 44455 3578999999998764 67888876555
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.|...|+++|.++|+++|+++++|++|.+|.. +..+. ++|++++|+||+ .||.| |+++.+++
T Consensus 151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~-----~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~ 215 (381)
T PRK02948 151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKL-----PIDVFEMGIDSLSVSAHKI-YGPKGVGAVYINPQ 215 (381)
T ss_pred cEeehhHHHHHHHHHHcCCEEEEEChhhcccc-----ccCcccCCCCEEEecHHhc-CCCCcEEEEEEcCC
Confidence 45688999999999999999999999987743 22222 799999999996 57887 88887764
No 41
>PRK14012 cysteine desulfurase; Provisional
Probab=99.79 E-value=4.8e-18 Score=169.24 Aligned_cols=200 Identities=18% Similarity=0.224 Sum_probs=138.8
Q ss_pred ccCCCCcHHHHHHHhhhhh--cccCCCCCCCcCC-CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLT--NKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~--~~~~~G~pg~r~~-~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~ 185 (358)
++..++++.|++++...+. +.+ +.++.+.. .+....+.++ .+++++++++|+++++ .++..+||.|++.++
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~g~~~~~---v~~~~g~t~al~~~l 83 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVD-IARNQIADLIGADPRE---IVFTSGATESDNLAI 83 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHH-HHHHHHHHHcCcCcCe---EEEeCCHHHHHHHHH
Confidence 5667889999999988775 443 33432111 1111112344 3678899999998752 345567778998888
Q ss_pred HHh----ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 018300 186 TAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (358)
Q Consensus 186 ~al----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~ 261 (358)
.++ +++||+|++++.+|.+.... +..+...|.. +..++++ +++.+|+++|++.++. ++++|++...+
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~-----~~~~~~~g~~--~~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~ 154 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDT-----CRQLEREGFE--VTYLDPQ-SNGIIDLEKLEAAMRD-DTILVSIMHVN 154 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHH-----HHHHHhCCCE--EEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECcC
Confidence 766 47999999988776554321 1122234654 4444455 3678999999999864 78888776544
Q ss_pred --CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 --~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|++|.. +.++. ++|++++|+||. .||.| |+++.+++
T Consensus 155 n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~g~G~l~~~~~ 221 (404)
T PRK14012 155 NEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKV-----PIDLSKLKVDLMSFSAHKI-YGPKGIGALYVRRK 221 (404)
T ss_pred CCccchhhHHHHHHHHHHcCCEEEEEcchhcCCc-----ccCcccCCCCEEEEehhhc-cCCCceEEEEEecC
Confidence 56788999999999999999999999997754 22232 799999999994 57766 77777664
No 42
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.79 E-value=6.3e-18 Score=165.67 Aligned_cols=198 Identities=16% Similarity=0.070 Sum_probs=140.3
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
.+-++|++..++++|++++..... . .+.++.+.+++ +++.+++++|+++.+. ..+++.|||.|+..
T Consensus 4 ~~l~~pgp~~~~~~v~~~~~~~~~-~-----------~~~~~~~~~~~-~r~~la~l~~~~~~~~-~i~~t~~~t~al~~ 69 (363)
T TIGR02326 4 YLLLTPGPLTTSRTVKEAMLFDWC-T-----------WDSDYNIVVEQ-IRQQLLALATAEEGYT-SVLLQGSGTFAVEA 69 (363)
T ss_pred eeEecCCCCCCCHHHHHHhCCCCC-C-----------CChHHHHHHHH-HHHHHHHHhCCCCCce-EEEEcCCCHHHHHH
Confidence 456789999999999999865331 1 12355566665 7899999999975311 23455688999999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-CCeEEEEcC--C
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGA--S 260 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-~~klIi~~~--s 260 (358)
++.+++.+||++++... +.+...+. ..+...|..+..++ ++ +++.+|++++++.++.. +++++.+.+ +
T Consensus 70 ~~~~l~~~~~~vlv~~~---~~~~~~~~---~~a~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 140 (363)
T TIGR02326 70 VIGSAVPKDGKLLVVIN---GAYGARIV---QIAEYLGIPHHVVD--TG-EVEPPDVVEVEAILAADPAITHIALVHCET 140 (363)
T ss_pred HHHhcCCCCCeEEEEeC---ChhhHHHH---HHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCccEEEEEeecC
Confidence 99999889988766442 22111100 12234565444444 44 35689999999988653 356554433 3
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.+|...|+++|.++|+++|+++++|++|++|.. +.++. ++|++++|+||||.||.| |+++.+++
T Consensus 141 ~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~-----~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~ 207 (363)
T TIGR02326 141 TTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGI-----PIDIAELHIDYLISSANKCIQGVPGFGFVIARQA 207 (363)
T ss_pred CccccCcHHHHHHHHHHcCCEEEEEccccccCc-----ccchhhcCccEEEecCccccccCCcceEEEECHH
Confidence 467789999999999999999999999987643 22333 799999999999999988 99998874
No 43
>PRK02769 histidine decarboxylase; Provisional
Probab=99.78 E-value=2.1e-17 Score=163.72 Aligned_cols=201 Identities=17% Similarity=0.106 Sum_probs=137.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
.....++.+...+.+.+ |+|...+..|.. ..++|+.++++++++||+++.+. .-+++++||++|+.++.+. +.|
T Consensus 34 ~~~~~~~~~~~~~~~n~--gnp~~~~~~g~~-~~~~e~~~~~~~a~l~g~~~~~~-~G~~TsGgTean~~a~~~ar~~~~ 109 (380)
T PRK02769 34 FDYSALKRFFSFSINNC--GDPYSKSNYPLN-SFDFERDVMNFFAELFKIPFNES-WGYITNGGTEGNLYGCYLARELFP 109 (380)
T ss_pred cCHHHHHHHHHhhhccC--CCccccCCCCCC-hHHHHHHHHHHHHHHhCCCCCCC-CEEEecChHHHHHHHHHHHHHhCC
Confidence 33455555555554443 566544332332 34688889999999999975432 1244566788988776544 468
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcCC--CCCCCCC
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGAS--AYPRDFD 267 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~s--~~~~~~d 267 (358)
+++|++++.+|.+.. +.....|.....++ ++ +++.+|+++|++.+++. +|.+|++... .+|...|
T Consensus 110 ~~~ii~s~~~H~Sv~--------ka~~~lg~~~~~V~--~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp 178 (380)
T PRK02769 110 DGTLYYSKDTHYSVS--------KIARLLRIKSRVIT--SL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN 178 (380)
T ss_pred CcEEEeCCCceehHH--------HHHHHcCCCCceec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC
Confidence 899999887655432 23334454434444 44 36789999999998763 3777766543 3678899
Q ss_pred HHHHHHHHHHcC---CEEEEeccccccccccCCccCCCC---CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 268 YPRMRQIADAVG---ALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 268 l~~I~~ia~e~g---~~livD~Ah~~Gl~~~g~~~~pl~---gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+++|.++|+++| +++++|+||+.+....-....+++ ++|.+++|+||++.+|.| |+++.+++
T Consensus 179 i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~ 247 (380)
T PRK02769 179 IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKK 247 (380)
T ss_pred HHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehh
Confidence 999999999998 699999999876552111111233 799999999999888997 88888875
No 44
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=1.9e-18 Score=171.14 Aligned_cols=169 Identities=21% Similarity=0.232 Sum_probs=124.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
|++..+++|+ ++++++|.+. .+.++||+.|+.+++. +++|||+|+++++.|++...... ..+...|
T Consensus 45 ~~p~~~~le~----~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G 110 (378)
T TIGR01329 45 GNPTRTALES----LLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLT----QVVPRSG 110 (378)
T ss_pred CChHHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHH----HHHHHcC
Confidence 5565566665 4788999865 4667899999887665 78999999999887776432100 0122345
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++. .|++++++.++ .++|+|++..+++ +...|+++|+++|+++|+++++|++|+.++. .
T Consensus 111 ~--~v~~vd~------~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-----~ 176 (378)
T TIGR01329 111 V--VVVHVDT------TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-----C 176 (378)
T ss_pred c--EEEEeCC------CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 4 3444332 38899999886 4789998876655 4578999999999999999999999876643 3
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhhc
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
.|++ ++|++++|+||++.||. ||+++++++ ++.+++...
T Consensus 177 ~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-----~~~~~~~~~ 219 (378)
T TIGR01329 177 NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE-----EIAKKVYFL 219 (378)
T ss_pred ChhhcCCcEEEEecceeccCCccceeEEEEeCcH-----HHHHHHHHH
Confidence 4566 89999999999999874 688888775 565666554
No 45
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.78 E-value=6.6e-18 Score=164.06 Aligned_cols=165 Identities=19% Similarity=0.192 Sum_probs=125.2
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 154 ~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
++.+++++|.+. .+.++|||.|+..++.++ ++|||+|+++.+.|.+.. ..+...|. ++..++++
T Consensus 24 ~~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~--------~~~~~~g~--~~~~~~~~ 88 (352)
T cd00616 24 EKAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA--------NAILLLGA--TPVFVDID 88 (352)
T ss_pred HHHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH--------HHHHHcCC--eEEEEecC
Confidence 445888999754 366789999999999998 799999999887654432 12334454 55566676
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEc
Q 018300 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT 311 (358)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S 311 (358)
++++.+|++++++.+. .++++|++.+ .+|...|+++|.++|+++|+++++|++|+.|....+. +++ .+|+.++|
T Consensus 89 ~~~~~~d~~~l~~~i~-~~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~~~~~~d~~~~S 163 (352)
T cd00616 89 PDTYNIDPELIEAAIT-PRTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KVGTFGDAGAFS 163 (352)
T ss_pred CCcCCcCHHHHHHhcC-cCCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---EcccCcceeEEc
Confidence 5467899999999885 3788887753 4688889999999999999999999999988654332 233 46888888
Q ss_pred Cc--CcCccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 312 TH--KSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 312 ~h--K~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
+| |+|+++.||+++++++ ++.+++...
T Consensus 164 ~~~~K~~~~~~gg~~~~~~~-----~~~~~~~~~ 192 (352)
T cd00616 164 FHPTKNLTTGEGGAVVTNDE-----ELAERARLL 192 (352)
T ss_pred CCCCCCCcccCceEEEECCH-----HHHHHHHHH
Confidence 66 9998889999999875 666666543
No 46
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.78 E-value=6.6e-18 Score=167.66 Aligned_cols=201 Identities=19% Similarity=0.212 Sum_probs=140.8
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCc-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-CCHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYT 186 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r-~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~-SGt~A~~~a~~ 186 (358)
++..++|+.|.+++...+...+ ++|... ++.+....+.+++ +++.+++++|++..+ +|.++ ++++++..++.
T Consensus 25 ~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~ia~~~~~~~~~---~v~~~~g~t~~l~~~~~ 98 (403)
T TIGR01979 25 AATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYEA-VREKVAKFINAASDE---EIVFTRGTTESINLVAY 98 (403)
T ss_pred ccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHHH-HHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHH
Confidence 6666889999999987766554 333321 2223333344554 788899999998321 34444 55568888877
Q ss_pred Hh----ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 187 AI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 187 al----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
++ +++||+|++++++|.++..... ......|..++. ++++ +++.+|++++++.+.+ ++++|++..++
T Consensus 99 ~~~~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~~~~~--v~~~-~~~~~~~~~l~~~i~~-~~~lv~~~~~~~ 170 (403)
T TIGR01979 99 SWGDSNLKAGDEIVISEMEHHANIVPWQ----LLAERTGATLKF--IPLD-DDGTLDLDDLEKLLTE-KTKLVAITHVSN 170 (403)
T ss_pred HhhhhcCCCCCEEEECcchhhHHHHHHH----HHHHhcCcEEEE--EecC-CCCCCCHHHHHHHhcc-CCeEEEEEcccc
Confidence 64 6899999999887766432110 122345654444 4455 4578999999998864 78988876544
Q ss_pred -CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 -~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||++ ||.| |+++.+++
T Consensus 171 ~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~~ 236 (403)
T TIGR01979 171 VLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHM-----PVDVQALDCDFYVFSGHKMY-GPTGIGVLYGKEE 236 (403)
T ss_pred cccccCCHHHHHHHHHHcCCEEEEEchhhcCcc-----ccCccccCCCEEEEeccccc-CCCCceEEEEchH
Confidence 46789999999999999999999999987753 22222 7999999999965 7887 88888763
No 47
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=8.4e-18 Score=164.59 Aligned_cols=198 Identities=16% Similarity=0.169 Sum_probs=151.1
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
.+.|+|++..+++.|+++|...+.++. ..++.+.+++ +.+.++.+|+.+..+ +.+...|||.|+.+
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~-----------s~~F~~~~~~-~~~~L~~v~~t~~~~--~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHR-----------SPDFVGIMKE-VLEKLRKVFGTENGD--VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCC-----------CHHHHHHHHH-HHHHHHHHhcCCCCc--EEEEcCCcHHHHHH
Confidence 467889999999999999987655433 2345555555 678899999998422 55667899999999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-CCeEEEE--cCC
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIA--GAS 260 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-~~klIi~--~~s 260 (358)
++.++++|||+|++.. +|.+.+++. ..+...|..+..+. .. +...+|++++++.+++. +.++|.+ +.+
T Consensus 72 av~sl~~pgdkVLv~~---nG~FG~R~~---~ia~~~g~~v~~~~--~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET 142 (383)
T COG0075 72 AVASLVEPGDKVLVVV---NGKFGERFA---EIAERYGAEVVVLE--VE-WGEAVDPEEVEEALDKDPDIKAVAVVHNET 142 (383)
T ss_pred HHHhccCCCCeEEEEe---CChHHHHHH---HHHHHhCCceEEEe--CC-CCCCCCHHHHHHHHhcCCCccEEEEEeccC
Confidence 9999999999999976 466665542 23456676555444 33 34589999999999743 3566654 345
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
++|...|+++|+++|++||+++++|+.-++|-. +..++ |+|+++++.+|+|.+|.| |++..+++
T Consensus 143 STGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~-----~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~ 209 (383)
T COG0075 143 STGVLNPLKEIAKAAKEHGALLIVDAVSSLGGE-----PLKVDEWGIDVAITGSQKALGAPPGLAFVAVSER 209 (383)
T ss_pred cccccCcHHHHHHHHHHcCCEEEEEecccCCCc-----ccchhhcCccEEEecCchhccCCCccceeEECHH
Confidence 678888999999999999999999997665543 33445 899999999999999999 77777764
No 48
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=3.7e-18 Score=171.86 Aligned_cols=192 Identities=17% Similarity=0.140 Sum_probs=134.6
Q ss_pred ccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHH
Q 018300 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (358)
Q Consensus 107 lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~ 186 (358)
+..+.+|..+.+.+++..... . ..++.+.|+ +++.++.+|+ ++++++|.+. .|.++||+.|+.+++.
T Consensus 36 i~~sstf~~~~~~~~~~~~~~-~-~~~~~Y~r~--~~pt~~~le~----~la~l~g~~~-----~v~fsSG~~Ai~~al~ 102 (437)
T PRK05613 36 IYQTTSYVFDSAEHAKQRFAL-E-DLGPIYSRL--TNPTVEALEN----RIASLEGGVH-----AVAFASGQAAETAAIL 102 (437)
T ss_pred EeCCCCcccCCHHHHHHhhcc-c-cCCceeeCc--cChHHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHHH
Confidence 334556665566555432111 1 123444443 5566666665 4888999865 4788999999999999
Q ss_pred HhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CC
Q 018300 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PR 264 (358)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~ 264 (358)
+++++||+|++++..|++..... ...+...|. ++..++ ++ .|++++++.+++ ++|+|++..+.+ +.
T Consensus 103 ~ll~~Gd~VI~~~~~y~~t~~~~----~~~l~~~Gi--~v~~vd-~~----~d~e~l~~~l~~-~tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 103 NLAGAGDHIVTSPRLYGGTETLF----LVTLNRLGI--EVTFVE-NP----DDPESWQAAVQP-NTKAFFGETFANPQAD 170 (437)
T ss_pred HhcCCCCEEEECCCccHHHHHHH----HHHHHhcCe--EEEEEC-CC----CCHHHHHHhCCc-cCeEEEEECCCCCCCc
Confidence 99999999999988888763210 012233454 444443 22 288999998875 688888765544 46
Q ss_pred CCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeC
Q 018300 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (358)
Q Consensus 265 ~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~ 328 (358)
..|+++|+++|+++|+++++|++|+.|.. ..+++ |+|++++|+||+++|+. ||+++.+.
T Consensus 171 v~di~~I~~la~~~gi~livD~t~a~g~~-----~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 171 VLDIPAVAEVAHRNQVPLIVDNTIATAAL-----VRPLELGADVVVASLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred ccCHHHHHHHHHHcCCeEEEECCCccccc-----cChHHhCCCEEEeeccceecCCCcceeEEEEecC
Confidence 89999999999999999999999987644 24566 99999999999988763 67777543
No 49
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=4.3e-18 Score=169.01 Aligned_cols=167 Identities=19% Similarity=0.207 Sum_probs=124.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++.++++|+. +++++|.+. .+.++||+.|+..++.++++|||+|+++++.|+++.... ..+...|
T Consensus 51 ~np~~~~lE~~----lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~-----~~~~~~g 116 (385)
T PRK08574 51 ENPTLRPLEEA----LAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLL-----KSLEKFG 116 (385)
T ss_pred CCccHHHHHHH----HHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH-----HHhhccC
Confidence 55666677664 788999875 366789999999999999999999999988777653210 1112234
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..+ .+|++++++.+++.++|+|+++.+++| ...|+++|+++|+++|+++++|++|+.|+..
T Consensus 117 ~--~v~~~-------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 182 (385)
T PRK08574 117 V--KVVLA-------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY----- 182 (385)
T ss_pred c--EEEEE-------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence 3 22221 246789999886547899998776665 5789999999999999999999999877542
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHh
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.+++ |+|++++|+||+|.||. ||+++++++ ++.+++.
T Consensus 183 ~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~-----~~~~~~~ 223 (385)
T PRK08574 183 RPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG-----EFLEELW 223 (385)
T ss_pred ChhhhCCcEEEeeCceeecCCCCceeEEEEECcH-----HHHHHHH
Confidence 3455 89999999999999874 787777655 5656554
No 50
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=2.7e-18 Score=169.94 Aligned_cols=162 Identities=17% Similarity=0.105 Sum_probs=120.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccC
Q 018300 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (358)
Q Consensus 141 ~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (358)
.|++..+.+|+. +++++|.+. .+.+.||+.|+..++.++++|||+|+++++.|++... +. . ......
T Consensus 47 ~gnPt~~~lE~~----lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~--~~-~-~~~~~~ 113 (377)
T TIGR01324 47 RGTLTHFALQDA----MCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRY--FC-D-IVLKRM 113 (377)
T ss_pred CCCccHHHHHHH----HHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHH--HH-H-HHHHhc
Confidence 367777777765 788999875 3667899999999999999999999998876654321 00 0 011223
Q ss_pred CceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 221 g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
|. ++..++.+ +.+++++.+++ ++|+|+++.++++ ...|+++|+++|+++|+++++|++|+.|...
T Consensus 114 gi--~v~~~d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~---- 180 (377)
T TIGR01324 114 GV--DITYYDPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF---- 180 (377)
T ss_pred Cc--EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc----
Confidence 44 33332221 22788888764 7899998766654 5789999999999999999999999988652
Q ss_pred cCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCC
Q 018300 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (358)
Q Consensus 299 ~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~ 329 (358)
.|++ |+|++++|++|+++|+. ||+++++++
T Consensus 181 -~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~ 214 (377)
T TIGR01324 181 -KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANAR 214 (377)
T ss_pred -CccccCceEEEecCceeccCCCCceEEEEEeCHH
Confidence 4666 99999999999998874 588887763
No 51
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.78 E-value=6.4e-18 Score=171.25 Aligned_cols=197 Identities=16% Similarity=0.223 Sum_probs=133.5
Q ss_pred HHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEE
Q 018300 117 AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIM 196 (358)
Q Consensus 117 ~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl 196 (358)
++.+++...+... .+. |.+.+.+.++++ .++++||.++ .+.+.+|+.|+..++.++++||| |+
T Consensus 58 a~~~a~~~a~~~g-~~~------Y~~~~g~~~Lre----aia~~~~~~~-----vv~t~ggt~A~~~~~~all~pGD-Vi 120 (460)
T PRK13238 58 AMSDRQWAAMMRG-DEA------YAGSRSYYRLED----AVKDIFGYPY-----TIPTHQGRAAEQILFPVLIKKGD-VV 120 (460)
T ss_pred hhhHHHHHHHHhC-Ccc------cCCCCCHHHHHH----HHHHHhCCCc-----EEECCCHHHHHHHHHHHhCCCCC-EE
Confidence 3566665555321 122 333333445555 4788898865 35667889999999999999999 87
Q ss_pred ecCCCCCcccccccccchhccccCCceEEEEeceecC---------CCCCCCHHHHHHHhhh---cCCeEEEEcCCCCC-
Q 018300 197 GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE---------STGLVDYDMLEKTAIL---FRPKLIIAGASAYP- 263 (358)
Q Consensus 197 ~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~iD~d~le~~i~~---~~~klIi~~~s~~~- 263 (358)
++++-+..+. ..+.+.|... +.+++++ ..+.+|+++|++.+.+ .++++|+++.++|+
T Consensus 121 i~~p~~~~~~--------~~i~~~G~~~--v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~Npt 190 (460)
T PRK13238 121 PSNYHFDTTR--------AHIELNGATA--VDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSA 190 (460)
T ss_pred ccCCcccchH--------HHHHHcCCEE--EEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCC
Confidence 7764322221 1234566644 4444432 2345999999999875 25789988776654
Q ss_pred --CCCC---HHHHHHHHHHcCCEEEEecccccc-cccc-----CCccCC--------CCCCcEEEEcCcCcCccCcEEEE
Q 018300 264 --RDFD---YPRMRQIADAVGALLMMDMAHISG-LVAA-----SVVADP--------FKYCDVVTTTTHKSLRGPRGGMI 324 (358)
Q Consensus 264 --~~~d---l~~I~~ia~e~g~~livD~Ah~~G-l~~~-----g~~~~p--------l~gaDiv~~S~hK~L~Gp~GG~I 324 (358)
...+ +++|.++|++||++|++|+||..+ +.+. +..... ..++|++++|++|.+.+|.||+|
T Consensus 191 GG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i 270 (460)
T PRK13238 191 GGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLL 270 (460)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEE
Confidence 3444 679999999999999999999764 2221 111111 13689999999999999999999
Q ss_pred EEeCCCCchhHHHHHHhhccC
Q 018300 325 FFKKDPVLGVELESAINNAVF 345 (358)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~~f 345 (358)
+++++ ++.++++...+
T Consensus 271 ~~~d~-----~l~~~~~~~~~ 286 (460)
T PRK13238 271 CFRDE-----DLFTECRTLCI 286 (460)
T ss_pred EcChH-----HHHHHhhhccc
Confidence 99975 78888877653
No 52
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=5.7e-18 Score=168.29 Aligned_cols=168 Identities=25% Similarity=0.272 Sum_probs=125.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCc
Q 018300 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 143 ~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
++...++|+ ++++++|.+.+ +.+.||+.|+.+++.++++|||+|+++++.|++...... ......|.
T Consensus 60 ~p~~~~Le~----~lA~~~g~~~~-----i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~gi 126 (388)
T PRK07811 60 NPTRTALEE----QLAALEGGAYG-----RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLID----KVFTRWGV 126 (388)
T ss_pred CccHHHHHH----HHHHHhCCCce-----EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHH----HhCcCCCe
Confidence 344455555 57889999873 567899999999999999999999999887776432100 01111233
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccC
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~ 300 (358)
++..++ ..|++++++.+.+ ++|+|++..++++ ...|+++|.++|+++|+++++|++++.+.. ..
T Consensus 127 --~~~~~d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~ 192 (388)
T PRK07811 127 --EYTPVD------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL-----QQ 192 (388)
T ss_pred --EEEEeC------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc-----CC
Confidence 333322 2589999998865 7899998766654 578999999999999999999999886643 24
Q ss_pred CCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 301 pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|+. ++|++++|++|+++||. ||+|+++++ ++.+++..
T Consensus 193 p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~-----~l~~~~~~ 233 (388)
T PRK07811 193 PLALGADVVVHSTTKYIGGHSDVVGGALVTNDE-----ELDEAFAF 233 (388)
T ss_pred chhhCCcEEEecCceeecCCCCcEEEEEEECCH-----HHHHHHHH
Confidence 566 89999999999999873 798888776 66665554
No 53
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.77 E-value=1.4e-17 Score=168.02 Aligned_cols=195 Identities=15% Similarity=0.142 Sum_probs=130.1
Q ss_pred CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc
Q 018300 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK 190 (358)
Q Consensus 111 ~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~ 190 (358)
-.+.++.|++++...+.+.....|.-.....|. ..+. +++.+++++|++++ +.++||+.|+..++. .+.
T Consensus 90 ~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~-r~~~----le~~lA~l~gae~a-----lvv~sg~aAi~l~l~-~l~ 158 (454)
T TIGR00474 90 RAPLAEEAIEAVTDAARGYSNLEYDLETGKRGS-RYSH----VEGLLCELTGAEDA-----LVVNNNAAAVLLALN-TLA 158 (454)
T ss_pred CCCCCHHHHHHHHHHHhcccchhccccccccch-HHHH----HHHHHHHHhCCCcE-----EEECCHHHHHHHHHH-HhC
Confidence 345799999999877764221111100001122 1233 45668999999873 557899999988884 479
Q ss_pred CCCEEEecCCC---CCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc-CCCC---C
Q 018300 191 PHDRIMGLDLP---HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAY---P 263 (358)
Q Consensus 191 pGD~Vl~~~~~---~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~-~s~~---~ 263 (358)
+||+|++++.+ +||.+... ..+...|. ++..++.+ +..|++++++.+++ ++++|++. .+++ |
T Consensus 159 ~GdeVIvs~~e~v~~ggs~~i~-----~~~~~~G~--~~~~v~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~~~G 227 (454)
T TIGR00474 159 KGKEVIVSRGELVEIGGSFRIP-----DVMEQSGA--KLVEVGTT---NRTHLKDYEDAITE-NTALLLKVHTSNYRIVG 227 (454)
T ss_pred CcCEEEECCChhhhhcchhhHH-----HHHHHcCC--EEEEeCCC---CCCCHHHHHHhcCc-CCEEEEEEccCcccccC
Confidence 99999998865 34432211 12234565 44444332 34688999998864 68887654 4443 2
Q ss_pred --CCCCHHHHHHHHHHcCCEEEEecccccccccc---------CCccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAA---------SVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 264 --~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~---------g~~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
...|+++|+++||++|+++++|++ +|.... +....+++ |+|++++|+||+|+||.+|+++++++
T Consensus 228 ~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~ 303 (454)
T TIGR00474 228 FTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKE 303 (454)
T ss_pred CCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHH
Confidence 368999999999999999999974 444311 11113344 89999999999999999999999875
No 54
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=4e-18 Score=171.50 Aligned_cols=165 Identities=21% Similarity=0.236 Sum_probs=123.6
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.++|+ +++.++++|+ ++++++|.++ .+.+.|||.|+.+++.+++++||+|++++.+|++.....
T Consensus 55 ~~~y~R~--~~p~~~~le~----~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~--- 120 (433)
T PRK08134 55 GHVYSRI--SNPTVAVLEE----RVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLL--- 120 (433)
T ss_pred CceeecC--cChHHHHHHH----HHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHH---
Confidence 3444443 5566666665 4788999887 377899999999999999999999999988877642210
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
. ..+...|. ++..++++ |++++++.+++ ++|+|++...+++ ...|+++|.++|+++|+++++|++|+.
T Consensus 121 ~-~~l~~~Gi--~v~~vd~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~ 190 (433)
T PRK08134 121 H-YTLRRFGI--ETTFVKPG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTT 190 (433)
T ss_pred H-HHHhhCCe--EEEEECCC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcc
Confidence 0 01122354 45554332 78999998875 7899988766654 679999999999999999999999987
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEE
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~ 326 (358)
+.. +.|++ |+|++++|+||+++|+. ||+++.
T Consensus 191 ~~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 191 PYL-----LRPFEHGADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred ccc-----CCchhcCCCEEEeccccccCCCCCceEEEEEe
Confidence 764 34667 99999999999987775 466553
No 55
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.77 E-value=6.2e-18 Score=168.12 Aligned_cols=190 Identities=24% Similarity=0.261 Sum_probs=133.1
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
.+..+..+.+.++....... ..++++.|+ +++..+++|+ ++++++|.+. .+.++||+.|+..++.++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~--~~~~~y~r~--~~p~~~~le~----~la~l~g~~~-----~v~~ssG~~Ai~~al~al 96 (390)
T PRK08133 30 LTSSFVFESAAEAAARFAGE--EPGNIYSRF--TNPTVTMFQE----RLAALEGAEA-----CVATASGMAAILAVVMAL 96 (390)
T ss_pred CCCCcccCCHHHHHHhhcCC--cCCceeECC--CChHHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHH
Confidence 34445555555555432221 124555554 3555555554 5888999876 366789999999999999
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCC
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDF 266 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~ 266 (358)
++|||+|++.++.|++...... ..+...|. ++..+++ .|++++++.++. ++|+|+++.+++ +...
T Consensus 97 ~~~Gd~Vi~~~~~y~~t~~~~~----~~~~~~G~--~v~~vd~------~d~~~l~~~i~~-~tklV~ie~p~NptG~v~ 163 (390)
T PRK08133 97 LQAGDHVVSSRSLFGSTVSLFE----KIFARFGI--ETTFVDL------TDLDAWRAAVRP-NTKLFFLETPSNPLTELA 163 (390)
T ss_pred hCCCCEEEEccCcchhHHHHHH----HHHHHcCc--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCCcC
Confidence 9999999999887776532110 11223454 4444433 278999988864 789998866554 4678
Q ss_pred CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCccC---cEEEEEEeCC
Q 018300 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKD 329 (358)
Q Consensus 267 dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~ 329 (358)
|+++|.++|+++|+++++|++|+.+.. ..|+. ++|++++|+||+++|+ -||+|+++++
T Consensus 164 dl~~I~~la~~~gi~livD~t~~~~~~-----~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~ 225 (390)
T PRK08133 164 DIAALAEIAHAAGALLVVDNCFCTPAL-----QQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKE 225 (390)
T ss_pred CHHHHHHHHHHcCCEEEEECCCccccc-----CCchhhCCcEEEeecceeecCCcceEeEEEEcCHH
Confidence 999999999999999999999875543 24556 8999999999999765 3688888764
No 56
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=4.7e-18 Score=168.90 Aligned_cols=180 Identities=15% Similarity=0.114 Sum_probs=126.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
|++....+|+ +++++.|.+. .+.+.||+.|+..++.++++|||+|+++++.|++..... ...+...|
T Consensus 59 ~npt~~~Le~----~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~----~~~l~~~G 125 (394)
T PRK09028 59 GTPTHFAFQA----AIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLC----DKILKGFG 125 (394)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHhhhhcc
Confidence 3444455655 4777877764 356789999999999999999999999988776643211 01112234
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++. .|.+.+++.+.+ ++|+|+++.++|++ ..|+++|+++|+++|+++++|++|+.++. .
T Consensus 126 i--~v~~v~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-----~ 191 (394)
T PRK09028 126 I--ETTYYDP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-----S 191 (394)
T ss_pred e--EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 3 3333221 145788888764 78999998877764 78999999999999999999999987642 3
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh-ccCCcccccccc
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN-AVFPGLQVGFVS 354 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~-~~f~g~q~~~~~ 354 (358)
.|++ |+|+++.|+|||+.|+. +|+++.++ ++.+++.. ....|...+|+.
T Consensus 192 ~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~------~~~~~l~~~~~~~G~~~~p~~ 245 (394)
T PRK09028 192 RPFEMGVDISIQAATKYIVGHSDVMLGTATANE------KHWDQLREHSYLMGQCTSPDD 245 (394)
T ss_pred CccccCceEEEEeCCeEecCCCCEEEEEEECCH------HHHHHHHHHHHhcCCCCCHHH
Confidence 5777 99999999999999985 57766544 45555543 223455555554
No 57
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.77 E-value=8.7e-18 Score=167.73 Aligned_cols=167 Identities=20% Similarity=0.243 Sum_probs=125.0
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc
Q 018300 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (358)
Q Consensus 134 ~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (358)
|.+.|| +++.++++|+ ++++++|.+. .+.+.||+.|+..++.++++|||+|++++..|++.+...
T Consensus 62 ~~Y~r~--~~p~~~~le~----~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~---- 126 (403)
T PRK07810 62 FVYSRY--GNPTVSMFEE----RLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVC---- 126 (403)
T ss_pred cceeCC--CCchHHHHHH----HHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHH----
Confidence 444443 4555666766 4788999876 477899999999999999999999999886666543210
Q ss_pred hhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
...+...|. ++..++. .|++++++.+++ ++|+|+++.+++ +...|+++|.++|+++|+++++|++|+.+
T Consensus 127 ~~~~~~~G~--~v~~vd~------~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~ 197 (403)
T PRK07810 127 NEILPRWGV--ETVFVDG------EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATP 197 (403)
T ss_pred HHHHHHcCc--EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 012233454 4444332 388999998864 789999876665 45789999999999999999999999876
Q ss_pred ccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCC
Q 018300 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (358)
Q Consensus 292 l~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~ 329 (358)
... .+++ |+|++++|++|++.|+. ||+|+++++
T Consensus 198 ~~~-----~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~ 234 (403)
T PRK07810 198 LLQ-----RGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE 234 (403)
T ss_pred ccC-----ChhhcCCcEEEccCCceecCCcCceeEEEEeChH
Confidence 542 3456 89999999999998754 799998875
No 58
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.77 E-value=2e-17 Score=163.36 Aligned_cols=199 Identities=15% Similarity=0.224 Sum_probs=140.8
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEeC-CCHHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPL-SGSPANFEVYT 186 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~-~~~~~~v~V~~~-SGt~A~~~a~~ 186 (358)
++..++++.|++++...+.+.+ ++|++.+..+......+++ +++.+++.+|+ +++ +|.++ ++++++..++.
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~----~i~~t~g~teal~~~~~ 78 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIAE-ALDKLYKGINARDLD----DIIITSCATESNNWVLK 78 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHHHH
Confidence 5667889999999988877655 3555444444555566766 56667778887 443 35555 45669998888
Q ss_pred Hhc-----cC-CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 187 AIL-----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 187 all-----~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
++. ++ ||+|++++.+|.++.... ..+...|..+ ..++++ +++.+|++++++.+.. ++++|++..+
T Consensus 79 ~~~~~~~~~~~~~~vi~~~~e~ps~~~~~-----~~~~~~G~~v--~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 149 (382)
T TIGR03403 79 GVYFDEILKGGKNHIITTEVEHPAVRATC-----AFLESLGVEV--TYLPIN-EQGTITAEQVREAITE-KTALVSVMWA 149 (382)
T ss_pred HHHHhhcccCCCCEEEEcCCccHHHHHHH-----HHHHHCCCEE--EEEecC-CCCCCCHHHHHHhccc-CCeEEEEEcc
Confidence 762 55 478999887776653321 1223446544 444455 3578999999998864 6788877654
Q ss_pred C--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC-C-CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 261 A--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 261 ~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl-~-gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+ +|...|+++|.++|+++|+++++|++|+.|.. +..+ + ++|++++|+||+ .||.| |+++.+++
T Consensus 150 ~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~ 217 (382)
T TIGR03403 150 NNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKI-----PVDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKG 217 (382)
T ss_pred cCCCccccCHHHHHHHHHHcCCEEEEechhhcCCC-----ccCccccCCCEEEEcchhh-CCCCceEEEEECCC
Confidence 4 46788999999999999999999999987643 2222 2 799999999996 67887 88887765
No 59
>PRK04311 selenocysteine synthase; Provisional
Probab=99.76 E-value=4.4e-17 Score=164.87 Aligned_cols=195 Identities=16% Similarity=0.150 Sum_probs=129.4
Q ss_pred CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc
Q 018300 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK 190 (358)
Q Consensus 111 ~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~ 190 (358)
-.+.++.|++++...+.+.....|.......| +.++. +++.+++++|++.. +.++||+.|+..++.+ +.
T Consensus 95 ~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g-~r~~~----~e~~lA~l~Gae~a-----~vv~sgtaAl~l~l~~-l~ 163 (464)
T PRK04311 95 RALLSEAAIEAVTEAARGYSNLEYDLATGKRG-SRDRA----LAALLCALTGAEDA-----LVVNNNAAAVLLALNA-LA 163 (464)
T ss_pred CCCCCHHHHHHHHHHHhcccccccchhhcccc-hHHHH----HHHHHHHHhCCCeE-----EEECCHHHHHHHHHHH-hC
Confidence 34679999999987765421111100000112 22233 45668999999863 5678999999988865 68
Q ss_pred CCCEEEecCCCC---CcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC-CCC----
Q 018300 191 PHDRIMGLDLPH---GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-SAY---- 262 (358)
Q Consensus 191 pGD~Vl~~~~~~---ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~-s~~---- 262 (358)
+||+|++++.++ ||.+... ..+...|. ++..++.+ +..+++++++.+++ ++++|++.+ +++
T Consensus 164 ~GdeVIvs~~e~~~~ggs~~i~-----~~~~~~G~--~l~~v~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i~G 232 (464)
T PRK04311 164 AGKEVIVSRGELVEIGGAFRIP-----DVMRQAGA--RLVEVGTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRIEG 232 (464)
T ss_pred CCCEEEEcchhhhhcCcchhhH-----HHHHHCCc--EEEEECCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCccccc
Confidence 999999987543 2222110 12234565 44444432 34678999998875 688876644 443
Q ss_pred -CCCCCHHHHHHHHHHcCCEEEEeccccccccc---------cCCccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVA---------ASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 263 -~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~---------~g~~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
+...|+++|+++||++|+++++|+++ |... ......+++ |+|++++|+||+|+||.+|+|+++++
T Consensus 233 ~~~~~dl~eI~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~ 308 (464)
T PRK04311 233 FTKEVSLAELAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKE 308 (464)
T ss_pred cCCcCCHHHHHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHH
Confidence 24689999999999999999999953 3221 111123445 89999999999999999999999874
No 60
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.76 E-value=3.9e-17 Score=160.13 Aligned_cols=205 Identities=13% Similarity=0.084 Sum_probs=139.6
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCC-cC---CCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RY---YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~-r~---~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
++-|.+..++.+.+++++...... + +.|.. .. ..+.+.+.+ +++.+++++|++. .+.+.++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~----l~~~la~~~g~~~-----i~~~~g~t~a 71 (361)
T cd06452 4 IDPIQRGGRLTPEARKALIEWGDG-Y--SVCDFCRGRLDEIEKPPIKD----FHHDLAEFLGMDE-----ARVTPGAREG 71 (361)
T ss_pred CChhhcCCCCCHHHHHHHHHHhcc-c--CCccccccccccccCchHHH----HHHHHHHHcCCce-----EEEeCCHHHH
Confidence 455677888999999999876521 1 22211 00 111233333 4556889999943 2444556679
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhh------cCCe
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL------FRPK 253 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~------~~~k 253 (358)
+..++.++++|||+|+++++.|.+.. ..+...|.. ++.++.+++ ++.+|++++++.++. .+++
T Consensus 72 l~~~l~~~~~~gd~Vl~~~~~~~~~~--------~~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 141 (361)
T cd06452 72 KFAVMHSLCEKGDWVVVDGLAHYTSY--------VAAERAGLN--VREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPA 141 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCcchHHH--------HHHHhcCCE--EEEEecCCCCCcccCHHHHHHHHHHHhhccCCCce
Confidence 99999999999999999876443321 123455654 444445532 248999999988753 2678
Q ss_pred EEEEcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC-C-CCcEEEEcCcCcCccC-cEEEEEEeC
Q 018300 254 LIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTTTHKSLRGP-RGGMIFFKK 328 (358)
Q Consensus 254 lIi~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl-~-gaDiv~~S~hK~L~Gp-~GG~I~~~~ 328 (358)
+|++..++ +|...|+++|.++|+++|+++++|++|+.|.. +.+. + ++|++++|+||+|++| ++|++++++
T Consensus 142 lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~ 216 (361)
T cd06452 142 LALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRM-----PVSGKELGADFIVGSGHKSMAASAPIGVLATTE 216 (361)
T ss_pred EEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCc-----CCCHHHcCCCEEEecCCccccCCCCeEEEEECH
Confidence 88876654 45678999999999999999999999987643 1122 2 7899999999999654 569988876
Q ss_pred CCCchhHHHHHHhh
Q 018300 329 DPVLGVELESAINN 342 (358)
Q Consensus 329 ~~~~~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 217 ------~~~~~l~~ 224 (361)
T cd06452 217 ------EWADIVFR 224 (361)
T ss_pred ------HHHHHHhc
Confidence 45555544
No 61
>PLN03032 serine decarboxylase; Provisional
Probab=99.76 E-value=8e-17 Score=158.95 Aligned_cols=200 Identities=17% Similarity=0.168 Sum_probs=142.2
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCC-CcceEEeCCCHHHHHHHHHHhc--c
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-WGVNVQPLSGSPANFEVYTAIL--K 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~-~~v~V~~~SGt~A~~~a~~all--~ 190 (358)
....+++++...+.+.+ |+|...+..|.. ..++|+.++++++++||+++++ || +++++||+||+.++.+.. .
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g~~-a~~~e~~v~~~ia~llg~~~~~~~G--~fTsGGTEaNl~al~~ar~~~ 109 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNYGVH-SRQFEVGVLDWFARLWELEKDEYWG--YITTCGTEGNLHGILVGREVF 109 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCCCcc-HHHHHHHHHHHHHHHhCCCCccCCE--EEeCchHHHHHHHHHHHHHhC
Confidence 55568888887776654 778765444443 4578888999999999998754 32 556788999998887642 3
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEc--CCCCCCCC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAG--ASAYPRDF 266 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~--~s~~~~~~ 266 (358)
++++|+++..+|.+.. +.+...+..++.+ +++ .++.+|+++|++.+.+. +|.+|++. .+.+|...
T Consensus 110 ~~~~vi~s~~~H~Sv~--------kaa~~lg~~~~~V--~~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id 178 (374)
T PLN03032 110 PDGILYASRESHYSVF--------KAARMYRMEAVKV--PTL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD 178 (374)
T ss_pred CCcEEEeCCCceeHHH--------HHHHHcCCCCeEe--eeC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC
Confidence 5668888776543321 2344455544444 455 46899999999998753 46666663 34578899
Q ss_pred CHHHHHHHHHHcC-----CEEEEeccccccccccCC-cc-CCCC-CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 267 DYPRMRQIADAVG-----ALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 267 dl~~I~~ia~e~g-----~~livD~Ah~~Gl~~~g~-~~-~pl~-gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|+++|+++|+++| +++++|+|++.+...... .+ ..+. ++|.+++|+||++..|.| |+++++++
T Consensus 179 pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~ 250 (374)
T PLN03032 179 DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKK 250 (374)
T ss_pred CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEch
Confidence 9999999999997 589999999876542110 01 1222 799999999998766998 89999875
No 62
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.76 E-value=1.3e-17 Score=165.94 Aligned_cols=167 Identities=20% Similarity=0.197 Sum_probs=124.4
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
||.+.|| +++.++++|+ ++++++|.++ .+.++||+.|+..++.++++|||+|+++++.|++++...
T Consensus 50 ~~~y~r~--~~p~~~~le~----~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~--- 115 (391)
T TIGR01328 50 GYIYSRL--GNPTVSNLEG----RIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALL--- 115 (391)
T ss_pred CCceeCC--CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHH---
Confidence 4545454 4566667776 4889999986 367889999999999999999999999988776543210
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
...+...|. ++..++++ |++++++.+.+ ++|+|+++.+++ +...|+++|.++|+++|+++++|++|+.
T Consensus 116 -~~~~~~~G~--~~~~vd~~------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~ 185 (391)
T TIGR01328 116 -EHALTKFGI--QVDFINMA------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFAT 185 (391)
T ss_pred -HHHHhcCCe--EEEEECCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCch
Confidence 011223454 44443332 78999988764 789998876654 4578999999999999999999999986
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeC
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~ 328 (358)
+.. ..+++ ++|++++|++|+++|+. ||++++++
T Consensus 186 ~~~-----~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~ 222 (391)
T TIGR01328 186 PML-----TNPVALGVDVVVHSATKYIGGHGDVVAGLICGKA 222 (391)
T ss_pred hcc-----CCchhcCCCEEEccccccccCCCCceEEEEEcCH
Confidence 643 24556 89999999999998764 68888766
No 63
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.76 E-value=1e-17 Score=166.90 Aligned_cols=168 Identities=23% Similarity=0.277 Sum_probs=124.2
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.+.|| +++..+++|+ ++++++|++++ +.+.||+.|+..++.++++|||+|+++++.|+++.....
T Consensus 56 ~~~y~r~--~~p~~~~Le~----~lA~l~G~~~~-----~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~-- 122 (398)
T PRK07504 56 GFIYSRY--SNPTVDMFEK----RMCALEGAEDA-----RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVE-- 122 (398)
T ss_pred CceeecC--CCchHHHHHH----HHHHHhCCCee-----eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHH--
Confidence 3444444 3455566665 47889999874 346799999998888889999999999887777532110
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
......|. ++..+ + .+|++++++.+++ ++|+|+++.++++ ...|+++|.++|+++|+++++|++|+.
T Consensus 123 --~~~~~~G~--~v~~v--d----~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~ 191 (398)
T PRK07504 123 --TLLPRYGI--ESTLV--D----GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFAT 191 (398)
T ss_pred --HHHhhcCe--EEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccc
Confidence 01122343 44443 2 3789999998864 7899998777764 688999999999999999999999986
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccC---cEEEEEEeCC
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKD 329 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~ 329 (358)
+.. ..+++ ++|++++|+||++.|+ -||+++++++
T Consensus 192 ~~~-----~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~ 229 (398)
T PRK07504 192 PLF-----QKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA 229 (398)
T ss_pred ccc-----CCchhhCCCEEEeeccccccCCccceEEEEEeCcH
Confidence 643 24556 8999999999999765 3688888775
No 64
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.76 E-value=1.2e-17 Score=165.42 Aligned_cols=175 Identities=18% Similarity=0.193 Sum_probs=127.4
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.+.|+ +++.++.+|+. +++++|.+.. +.++||+.|+.+++ ++++|||+|+++++.|++.+....
T Consensus 41 ~~~y~r~--~~p~~~~Le~~----la~l~g~~~a-----l~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~-- 106 (380)
T PRK06176 41 GYEYSRS--GNPTRFALEEL----IADLEGGVKG-----FAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD-- 106 (380)
T ss_pred CCcccCC--CChhHHHHHHH----HHHHhCCCCE-----EEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH--
Confidence 4555554 55666777764 7889998763 67899999998666 578999999999887776542110
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
..+...|. ++..++ ..|++++++.+++ ++++|++..++++ ...|+++|.++|+++|+++++|++++.
T Consensus 107 --~~~~~~gi--~v~~vd------~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~ 175 (380)
T PRK06176 107 --KVLVKNGL--SCTIID------TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFAT 175 (380)
T ss_pred --HHHHhcCe--EEEEcC------CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccc
Confidence 11223343 434332 2488999998764 7899988766654 578999999999999999999999875
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+.. ..|++ ++|++++|++|++.||. ||+++++++ ++.+++..
T Consensus 176 ~~~-----~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~-----~~~~~~~~ 221 (380)
T PRK06176 176 PYY-----QNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE-----ALAQEIAF 221 (380)
T ss_pred ccc-----CCccccCCCEEEecCceeccCCccceeeEEEecHH-----HHHHHHHH
Confidence 532 24566 99999999999998875 788888765 56555543
No 65
>PRK07179 hypothetical protein; Provisional
Probab=99.76 E-value=1.1e-16 Score=159.53 Aligned_cols=201 Identities=18% Similarity=0.229 Sum_probs=139.9
Q ss_pred ccCCCC----cHHHHHHHhhhhhcccCCCCC-CCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 109 ASENFT----SRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 109 as~n~~----s~~V~~al~~~l~~~~~~G~p-g~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
.+++|. .|.|++++.+.+...+ .+.. ++.+..|.+...++|+ ++++++|.+. .++++||+.||..
T Consensus 60 ~~~~YL~l~~~p~v~~a~~~~~~~~~-~~~~~s~~~~~~~~~~~~le~----~la~~~g~~~-----~~~~~sG~~An~~ 129 (407)
T PRK07179 60 QSNDYLNLSGHPDIIKAQIAALQEEG-DSLVMSAVFLHDDSPKPQFEK----KLAAFTGFES-----CLLCQSGWAANVG 129 (407)
T ss_pred ecCCccCCCCCHHHHHHHHHHHHHhC-CCCCccccccCCchHHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHH
Confidence 566665 7999999988775432 1111 3345555555556654 5889999875 3668899999999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
++.++..+||.|++..+.|.+.. ..+...+. ++.+++ ..|++++++.+++.++++|++...+
T Consensus 130 ~l~~l~~~g~~v~~~~~~h~s~~--------~~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~ 193 (407)
T PRK07179 130 LLQTIADPNTPVYIDFFAHMSLW--------EGVRAAGA--QAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYST 193 (407)
T ss_pred HHHHhCCCCCEEEEECCcCHHHH--------HHHHHCCC--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 99999999999998765433221 12223443 333332 3689999998865457888886544
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecccccccccc-CC--c-cCCCC-CCcEEEEcCcCcCccCcEEEEEEeCCCCchhHH
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--V-ADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL 336 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~--~-~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~ 336 (358)
.|...|+++|.++|+++|++|++|++|+.|.... |. . ...+. .+|++++|+||+++ +++|++++++ ++
T Consensus 194 tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~------~~ 266 (407)
T PRK07179 194 TGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPR------EL 266 (407)
T ss_pred CCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCH------HH
Confidence 4678999999999999999999999998775321 11 1 11122 57999999999985 5789999876 45
Q ss_pred HHHHhh
Q 018300 337 ESAINN 342 (358)
Q Consensus 337 ~~~i~~ 342 (358)
.+.+..
T Consensus 267 ~~~~~~ 272 (407)
T PRK07179 267 AEYVPF 272 (407)
T ss_pred HHHHHH
Confidence 555543
No 66
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.76 E-value=2.3e-17 Score=159.85 Aligned_cols=195 Identities=22% Similarity=0.228 Sum_probs=134.2
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCC
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G-~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD 193 (358)
+|+|++++...+.+ |.+++.+.+++.| .+. .+.+++++++++|++. .+.+++|+.++..++.++++|||
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~----~~~l~~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd 86 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLISGTSDL----HEELEEELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGD 86 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeecCCchH----HHHHHHHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCC
Confidence 68999999988864 4343333333333 332 2335667899999864 36678999999998888899999
Q ss_pred EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh----cCCeEEEEcCCC--CCCCCC
Q 018300 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASA--YPRDFD 267 (358)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~----~~~klIi~~~s~--~~~~~d 267 (358)
+|++.++.|.+... .....|..+ .+++ .+|++++++.+.. .++++|+++..+ .|...|
T Consensus 87 ~Vl~~~~~~~~~~~--------~~~~~g~~~--~~~~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 87 LIISDSLNHASIID--------GIRLSGAKK--RIFK------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred EEEEehhhhHHHHH--------HHHHcCCce--EEec------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 99998876554321 223445533 3321 3578888888764 356777776543 466889
Q ss_pred HHHHHHHHHHcCCEEEEecccccccccc-CCc--cCCC--CCCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 268 YPRMRQIADAVGALLMMDMAHISGLVAA-SVV--ADPF--KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~~--~~pl--~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+++|.++|+++|+++++|++|..|.... +.. ..+. .+.|++++|+||+++. +||+++.++ ++.+++..
T Consensus 151 ~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~gG~i~~~~------~~~~~~~~ 223 (349)
T cd06454 151 LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VGGYIAGSK------ELIDYLRS 223 (349)
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cCCEEECCH------HHHHHHHH
Confidence 9999999999999999999998775521 110 1111 2789999999998754 788888776 45555544
No 67
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.76 E-value=3.1e-17 Score=161.86 Aligned_cols=198 Identities=23% Similarity=0.251 Sum_probs=139.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD 193 (358)
+++.+.+++...+.. +..++++.++..|.. ++.+.+++++++++|.+. +|.+++|++++..++.++++|||
T Consensus 57 ~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~---~l~~~l~~~la~~~g~~~-----~i~~tsG~~a~~~~~~~l~~~gd 127 (397)
T PRK06939 57 NHPELIAAAKAALDS-HGFGMASVRFICGTQ---DLHKELEEKLAKFLGTED-----AILYSSCFDANGGLFETLLGKED 127 (397)
T ss_pred CCHHHHHHHHHHHHH-cCCCCcccccccCCc---HHHHHHHHHHHHHhCCCc-----EEEEcChHHHHHHHHHHhCCCCC
Confidence 688899988877644 323555545555653 344556677899999763 47788999999999999999999
Q ss_pred EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---c--CCeEEEEcC--CCCCCCC
Q 018300 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RPKLIIAGA--SAYPRDF 266 (358)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---~--~~klIi~~~--s~~~~~~ 266 (358)
+|++.++.|.++.. .+...+.. .+.++ .+|++++++.++. . ++++|+++. +..|...
T Consensus 128 ~vi~~~~~~~~~~~--------~~~~~~~~--~~~~~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~ 191 (397)
T PRK06939 128 AIISDALNHASIID--------GVRLCKAK--RYRYA------NNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA 191 (397)
T ss_pred EEEEEhhhhHHHHH--------HHHhcCCc--eEEeC------CCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC
Confidence 99999886655321 22344442 23322 2588888887753 2 567777763 3356678
Q ss_pred CHHHHHHHHHHcCCEEEEecccccccccc-CC--cc-CCCC-CCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHh
Q 018300 267 DYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA-DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 267 dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~--~~-~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
++++|.++|+++|++|++|++|..|.... +. .+ ..+. +.|++++|+||+++|++||++++++ ++.+.+.
T Consensus 192 ~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~------~~~~~l~ 265 (397)
T PRK06939 192 PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRK------EVIDWLR 265 (397)
T ss_pred CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCH------HHHHHHH
Confidence 99999999999999999999997665422 11 11 1122 5789999999999889999999876 4555554
Q ss_pred h
Q 018300 342 N 342 (358)
Q Consensus 342 ~ 342 (358)
.
T Consensus 266 ~ 266 (397)
T PRK06939 266 Q 266 (397)
T ss_pred H
Confidence 4
No 68
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.76 E-value=1.8e-17 Score=163.40 Aligned_cols=173 Identities=19% Similarity=0.225 Sum_probs=126.2
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.+.|| +++.++++|+. +++++|.+. .+.++||+.|+.+++ .+++|||+|+++...||+.....
T Consensus 45 ~~~Y~R~--~~p~~~~le~~----lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~--- 109 (364)
T PRK07269 45 GFDYTRT--KNPTRAKLEET----LAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWF--- 109 (364)
T ss_pred CcceeCC--CCccHHHHHHH----HHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHH---
Confidence 4445554 45666777764 788888876 366789999999888 46799999999987777643210
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
......+ .++ + +...|++++++.+++ ++|+|+++.+++| ...|+++|+++|+++|+++++|++++.
T Consensus 110 --~~~~~~~-~~~-----~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~ 177 (364)
T PRK07269 110 --NQQEKEG-RFH-----F---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYS 177 (364)
T ss_pred --HHHHhcC-cEE-----E---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 0000011 111 1 123588999998864 7899998877765 468999999999999999999999765
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
++. ..|++ ++|++++|+||++.|+. ||+|+++++ ++.+++..
T Consensus 178 ~~~-----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~-----~l~~~~~~ 223 (364)
T PRK07269 178 PIY-----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDL-----ELYEKLFY 223 (364)
T ss_pred ccc-----CCchhhCCcEEEecCceeccCCCcccceEEEeCcH-----HHHHHHHH
Confidence 532 35677 99999999999998865 799898776 66666654
No 69
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=2.4e-17 Score=164.61 Aligned_cols=180 Identities=23% Similarity=0.216 Sum_probs=128.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++..+++|+ ++++++|.+. .+.+.||+.|+..++.++++|||+|+++++.|++...... ......|
T Consensus 58 ~~p~~~~Le~----~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~----~~~~~~g 124 (405)
T PRK08776 58 GNPTRDLLGE----ALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFN----ALAKKGH 124 (405)
T ss_pred CChHHHHHHH----HHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHH----HHHHhcC
Confidence 4555556654 5788999865 4778899999999999999999999998877765321100 0111223
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++ ..|++++++.++. ++|+|++..+++| ...|+++|.++|+++|+++++|++|+.+.. .
T Consensus 125 ~--~v~~v~------~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~-----~ 190 (405)
T PRK08776 125 F--ALITAD------LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-----Q 190 (405)
T ss_pred c--EEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3 334422 2488999988764 7899988766654 578999999999999999999999976532 3
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhhc-cCCccccccc
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA-VFPGLQVGFV 353 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~~-~f~g~q~~~~ 353 (358)
.|++ ++|++++|+||+|.|+. ||+++++++ ++.+++... ...|...+|+
T Consensus 191 ~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~-----~l~~~l~~~~~~~g~~~s~~ 244 (405)
T PRK08776 191 KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDA-----ELHQQLVWWANALGLTGSPF 244 (405)
T ss_pred CcccccCCEEEecCceeecCCCCceEEEEEeCCH-----HHHHHHHHHHHhcCCCCCHH
Confidence 5666 89999999999998875 688888765 666666542 2334434443
No 70
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.75 E-value=5.3e-17 Score=160.48 Aligned_cols=166 Identities=11% Similarity=0.047 Sum_probs=125.6
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 154 ~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
++++++++|.+. .+.++||+.|+.+++.++ ++|||+|+++++.+.+... .+...|. +++.++++
T Consensus 37 e~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~--------~~~~~G~--~~v~~d~d 101 (375)
T PRK11706 37 QQWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTAN--------AFVLRGA--KIVFVDIR 101 (375)
T ss_pred HHHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecC
Confidence 345788899875 356778899998887766 7999999999876554321 3345565 56677787
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEc
Q 018300 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT 311 (358)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S 311 (358)
+++..+|++++++.++. ++|+|++.. .+|...|+++|.++|+++|+++++|++|+.|....+. ++. ..|+.++|
T Consensus 102 ~~~~~~d~~~le~~i~~-~tk~i~~~~-~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~---~~g~~~~~~~~S 176 (375)
T PRK11706 102 PDTMNIDETLIEAAITP-KTRAIVPVH-YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGR---ALGTIGHIGCFS 176 (375)
T ss_pred CCcCCcCHHHHHHhcCC-CCeEEEEeC-CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCe---eeecCcCEEEEe
Confidence 76678999999998865 788887653 4677889999999999999999999999988643332 233 46888999
Q ss_pred Cc--CcCccCcEEEEEEeCCCCchhHHHHHHhhcc
Q 018300 312 TH--KSLRGPRGGMIFFKKDPVLGVELESAINNAV 344 (358)
Q Consensus 312 ~h--K~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~~ 344 (358)
+| |.+....||+++++++ ++.+++....
T Consensus 177 f~~~K~l~~g~gG~~~~~~~-----~~~~~~~~~~ 206 (375)
T PRK11706 177 FHETKNYTAGEGGALLINDP-----ALIERAEIIR 206 (375)
T ss_pred CCCCccccccCCeEEEECCH-----HHHHHHHHHH
Confidence 88 9997667788888776 6766665544
No 71
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.75 E-value=2.5e-17 Score=162.52 Aligned_cols=169 Identities=24% Similarity=0.262 Sum_probs=125.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++..+++|+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++..... . ......|
T Consensus 38 ~~p~~~~le~----~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~--~--~~~~~~g 104 (369)
T cd00614 38 GNPTVDALEK----KLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLF--E--RLLPKLG 104 (369)
T ss_pred CChhHHHHHH----HHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHH--H--HHHhhcC
Confidence 5666677776 4788999875 366789999999999999999999999987776642110 0 0112334
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++.+ |++++++.+++ ++|+|+++.+++ +...|+++|.++|+++|+++++|++|+.+.. .
T Consensus 105 ~--~~~~v~~~------d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-----~ 170 (369)
T cd00614 105 I--EVTFVDPD------DPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-----Q 170 (369)
T ss_pred e--EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----C
Confidence 4 44443332 58999998864 789999876654 4578999999999999999999999987643 2
Q ss_pred CCCC-CCcEEEEcCcCcCccC---cEEEEEEeCCCCchhHHHHHHhh
Q 018300 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.+++ ++|++++|++|+++|+ .||+++++++ ++.+++..
T Consensus 171 ~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-----~l~~~l~~ 212 (369)
T cd00614 171 RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE-----ALIQRLRF 212 (369)
T ss_pred ChhhhCCcEEEeccceeccCCCCceEEEEEeCcH-----HHHHHHHH
Confidence 4566 8999999999999875 4899999874 45555543
No 72
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=2.4e-17 Score=163.94 Aligned_cols=169 Identities=20% Similarity=0.210 Sum_probs=125.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++..+++|+ ++++++|.+. .+.++||+.|+.+++. ++++||+|+++++.|++.+.... ..+...|
T Consensus 52 ~~p~~~~le~----~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~----~~~~~~G 117 (390)
T PRK08064 52 GNPTREALED----IIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT----EVLSRFG 117 (390)
T ss_pred CChhHHHHHH----HHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH----HHHHHcC
Confidence 4555566665 5889999885 3667999999988886 78999999999988876543110 1123345
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
.. +..+++ .|++++++.+++ ++|+|++..+++ +...|+++|.++|+++|+++++|++++.+.. .
T Consensus 118 ~~--v~~v~~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 183 (390)
T PRK08064 118 IE--HTFVDM------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLL-----Q 183 (390)
T ss_pred CE--EEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccc-----c
Confidence 53 333332 278999988764 789998877665 5688999999999999999999999876532 2
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhhc
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
.+++ ++|++++|+||++.|+. +|+++++++ ++.++++..
T Consensus 184 ~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~-----~~~~~l~~~ 226 (390)
T PRK08064 184 KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE-----ELAQKLYFL 226 (390)
T ss_pred CchhhCCcEEEeecceeccCCccceeEEEEeCCH-----HHHHHHHHH
Confidence 3556 89999999999999886 488887765 666666654
No 73
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=2.8e-17 Score=163.62 Aligned_cols=177 Identities=20% Similarity=0.102 Sum_probs=130.0
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
++.+.|| +++.++++|+ ++++++|.+. .+.+.||+.|+.+++.++++|||+|+++++.|+++.....
T Consensus 56 ~~~Y~r~--~~pt~~~Le~----~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~-- 122 (394)
T PRK07050 56 QWRYGLH--ATPTSLALAQ----RLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE-- 122 (394)
T ss_pred CcccCCC--CCHHHHHHHH----HHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH--
Confidence 3445555 6676666665 4788999865 3566889999999999999999999999988776432110
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
......|. ++..++.. |.+++++.++. ++|+|+++.++++ ...|+++|.++|+++|+++++|++|+.
T Consensus 123 --~~~~~~Gi--~v~~vd~~------~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~ 191 (394)
T PRK07050 123 --WLARDFGI--TVRFYDPL------IGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSA 191 (394)
T ss_pred --HHHHhcCe--EEEEECCC------CHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccc
Confidence 01223454 44443321 45778888764 7899998776665 578999999999999999999999987
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccC---cEEEEEEeCCCCchhHHHHHHhhc
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
|.. ..|++ |+|++++|++|++.|. .||+++++++ ++.+++...
T Consensus 192 ~~~-----~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-----~~~~~~~~~ 238 (394)
T PRK07050 192 GLA-----FKPFEHGVDISVQALTKYQSGGSDVLMGATITADA-----ELHAKLKLA 238 (394)
T ss_pred ccc-----cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCH-----HHHHHHHHH
Confidence 754 24566 8999999999999765 3788888775 676766543
No 74
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.74 E-value=2.4e-17 Score=162.40 Aligned_cols=191 Identities=24% Similarity=0.231 Sum_probs=141.0
Q ss_pred CCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccc
Q 018300 132 EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFM 211 (358)
Q Consensus 132 ~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~ 211 (358)
.+|.+.|+ |++.++.+|+. ++++-|.+.. +.+.||+.|+..++.+++++||+|+.++..||+.+...
T Consensus 53 ~~~~Y~R~--~nPT~~~lE~~----~a~LEg~~~~-----~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~-- 119 (396)
T COG0626 53 GGYDYSRT--GNPTRDALEEA----LAELEGGEDA-----FAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLF-- 119 (396)
T ss_pred cCcccccC--CCccHHHHHHH----HHHhhCCCcE-----EEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHH--
Confidence 34555554 67888888874 6788888873 67899999999999999999999999987788754321
Q ss_pred cchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCCHHHHHHHHHHcCCEEEEecccc
Q 018300 212 TPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHI 289 (358)
Q Consensus 212 ~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~dl~~I~~ia~e~g~~livD~Ah~ 289 (358)
. +.....| +++.++ + .-|.+++++.+...++|+|+++.+.+|. ..|+++|+++||++|+++++|++-+
T Consensus 120 ~--~~l~~~g--i~~~~~--d----~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfa 189 (396)
T COG0626 120 E--KILQKFG--VEVTFV--D----PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFA 189 (396)
T ss_pred H--HHHHhcC--eEEEEE--C----CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcc
Confidence 0 1122334 344443 2 2244566666654479999999888874 7999999999999999999999844
Q ss_pred ccccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh--ccCCccccccccc
Q 018300 290 SGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN--AVFPGLQVGFVSY 355 (358)
Q Consensus 290 ~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~--~~f~g~q~~~~~~ 355 (358)
.+.+..|++ ||||++.|+.|++.|.. +|+++++++ ++.+++.. ....|...+|+..
T Consensus 190 -----tP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~-----~~~~~~~~~~~~~~G~~l~p~dA 251 (396)
T COG0626 190 -----TPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE-----ELYELLFFAQRANTGAVLSPFDA 251 (396)
T ss_pred -----cccccChhhcCCCEEEEeccccccCCcceeeeEEecChH-----HHHHHHHHHHHhhcCCCCCHHHH
Confidence 444567888 99999999999999975 588887776 77777633 2235777777654
No 75
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.74 E-value=3.5e-17 Score=163.36 Aligned_cols=167 Identities=20% Similarity=0.211 Sum_probs=123.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++.++++|+ ++++++|+++ .+.++||+.|+..++.++++|||+|++..+.|++.+... ...+...|
T Consensus 63 ~~p~~~~le~----~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~----~~~~~~~G 129 (403)
T PRK07503 63 SNPTLALLEQ----RMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL----HHGLGEFG 129 (403)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH----HHHHhhCC
Confidence 3445556665 4888999876 367789999999999999999999999887776543210 01122345
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..+++ .|++++++.++. ++|+|++..+++ +...|+++|.++|+++|+++++|++|+.+.. .
T Consensus 130 ~--~v~~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~-----~ 195 (403)
T PRK07503 130 V--TVRHVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL-----Q 195 (403)
T ss_pred E--EEEEeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 4 4444333 278999998865 789998865554 4678999999999999999999999986532 2
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHh
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.++. ++|++++|++|+++|+. ||+++.++ ++.+++.
T Consensus 196 ~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~------~l~~~l~ 235 (403)
T PRK07503 196 RPLELGADLVVHSATKYLGGHGDITAGLVVGGK------ALADRIR 235 (403)
T ss_pred CchhhCCCEEEccccccccCCCceeEEEEEcCH------HHHHHHH
Confidence 4555 89999999999998753 78888554 5666664
No 76
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.74 E-value=4.4e-17 Score=161.45 Aligned_cols=168 Identities=22% Similarity=0.293 Sum_probs=122.2
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
++.+.|| +++.++++|+ ++++++|++. .+.+.||+.|+..++.+++++||+|++.+..|++.....
T Consensus 45 ~~~y~r~--~~p~~~~le~----~la~l~g~~~-----~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~--- 110 (380)
T TIGR01325 45 GFVYSRY--ANPTVAAFEE----RIAALEGAER-----AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFI--- 110 (380)
T ss_pred CcceecC--CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHH---
Confidence 3444454 3455556665 4788999865 366789999999999999999999999887676542210
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
...+...|. ++..++. .|++++++.++. ++|+|++..+++ +...|+++|.++|+++|+++++|++|+.
T Consensus 111 -~~~~~~~g~--~v~~v~~------~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~ 180 (380)
T TIGR01325 111 -SEILPRFGI--EVSFVDP------TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFAT 180 (380)
T ss_pred -HHHHHHhCC--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 011233454 3334332 278999888764 789999876665 4678999999999999999999999875
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccC---cEEEEEEeCC
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKD 329 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~ 329 (358)
+.. ..|++ ++|++++|+||+++|+ .||+++++++
T Consensus 181 ~~~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~ 218 (380)
T TIGR01325 181 PVL-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEE 218 (380)
T ss_pred ccc-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCHH
Confidence 532 24566 8999999999999876 2688888764
No 77
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=2.5e-17 Score=163.58 Aligned_cols=186 Identities=21% Similarity=0.208 Sum_probs=131.1
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc
Q 018300 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (358)
Q Consensus 134 ~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (358)
|.+.|| +++..+.+|+ ++++++|.+. .+.+.||+.|+..++.++++|||+|+++++.|++......
T Consensus 44 ~~Y~R~--~~pt~~~L~~----~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~--- 109 (386)
T PRK08045 44 HDYSRR--GNPTRDVVQR----ALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFD--- 109 (386)
T ss_pred ceeeCC--CCccHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH---
Confidence 344444 4455556655 5788988643 4667889999999999999999999999988776432100
Q ss_pred hhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
......+. ++..+ + ..|++++++.+++ ++|+|++..+++| ...|+++|.++|+++|+++++|+++..+
T Consensus 110 -~~~~~~gi--~v~~v--d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~ 179 (386)
T PRK08045 110 -SLAKRGCY--RVLFV--D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSP 179 (386)
T ss_pred -HHHhhCCe--EEEEe--C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 00111222 33332 2 3588999998764 7899998877765 5789999999999999999999998765
Q ss_pred ccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhhc-cCCccccccc
Q 018300 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA-VFPGLQVGFV 353 (358)
Q Consensus 292 l~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~~-~f~g~q~~~~ 353 (358)
.. +.|++ ++|++++|+||++.|+. +|+++++++ ++.+++... ...+...+|+
T Consensus 180 ~~-----~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~-----~~~~~l~~~~~~~g~~~~p~ 236 (386)
T PRK08045 180 AL-----QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNIGVTGGAF 236 (386)
T ss_pred cc-----CCchhhCCCEEEeecceeccCCCCceeEEEEeCcH-----HHHHHHHHHHHhcCCCCCHH
Confidence 32 35667 89999999999999887 588887655 565655432 2334444444
No 78
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.74 E-value=1.1e-16 Score=157.05 Aligned_cols=197 Identities=14% Similarity=0.078 Sum_probs=139.5
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a 184 (358)
..++|++..+++.|+++|..... . .+.++.+.+++ +++.+++++|+++... +.+++.|||.|+..+
T Consensus 7 ~~~~pgP~~~~~~~~~a~~~~~~-~-----------~~~~~~~~~~~-~~~~l~~l~~~~~~~~-~i~~~~~gt~~l~~~ 72 (368)
T PRK13479 7 LLLTPGPLTTSRTVREAMLRDWG-S-----------WDDDFNALTAS-VRAKLVAIATGEEGYT-CVPLQGSGTFSVEAA 72 (368)
T ss_pred eeecCCCCCCCHHHHHHhCCCCC-C-----------CChHHHHHHHH-HHHHHHHHhCCCCCce-EEEEcCCcHHHHHHH
Confidence 35789999999999999875431 1 12334455554 7888999999965211 234566889999999
Q ss_pred HHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-CCeEEEEcCCC--
Q 018300 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASA-- 261 (358)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-~~klIi~~~s~-- 261 (358)
+.++..+||+|++.+. +++...+ ...+...|..+..++ .+ +++.+|++++++.++.. ++++|++.+++
T Consensus 73 ~~~l~~~~~~vlv~~~---~~~~~~~---~~~~~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 143 (368)
T PRK13479 73 IGSLVPRDGKVLVPDN---GAYGARI---AQIAEYLGIAHVVLD--TG-EDEPPDAAEVEAALAADPRITHVALVHCETT 143 (368)
T ss_pred HHhccCCCCeEEEEeC---CchHHHH---HHHHHHcCCcEEEEE--CC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCc
Confidence 9999999999988764 2221110 012234565444444 44 24579999999987642 35666655443
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.|...|+++|.++|+++|+++++|++|..|.. +.++. ++|++++|+||++.||.| |+++.+++
T Consensus 144 tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~-----~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~ 209 (368)
T PRK13479 144 TGILNPLDEIAAVAKRHGKRLIVDAMSSFGAI-----PIDIAELGIDALISSANKCIEGVPGFGFVIARRS 209 (368)
T ss_pred cccccCHHHHHHHHHHcCCEEEEEcccccCCc-----cccccccCceEEEecCccccccCCCceEEEECHH
Confidence 56789999999999999999999999876642 22333 789999999999999888 99998873
No 79
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.74 E-value=3.9e-17 Score=162.17 Aligned_cols=167 Identities=20% Similarity=0.186 Sum_probs=122.4
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc
Q 018300 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (358)
Q Consensus 134 ~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (358)
|.+.|| +++.++++|+ .+++++|.+. .+.+.||+.|+..++.++++|||+|+++++.|++......
T Consensus 53 ~~y~r~--~~pt~~~Le~----~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~--- 118 (386)
T PRK06767 53 YIYSRL--GNPTVKLFEE----RMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLE--- 118 (386)
T ss_pred ccccCC--CCcchHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHH---
Confidence 334443 4455666665 4788999865 4778899999999999999999999999887766533100
Q ss_pred hhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
......+. +...+ ...|++++++.+.. ++|+|++..+++| ...|+++|.++|+++|+++++|++|+.+
T Consensus 119 -~~~~~~gi--~~~~~------~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~ 188 (386)
T PRK06767 119 -VLEEKFMI--THSFC------DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSP 188 (386)
T ss_pred -HHHhhcCe--EEEEe------CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 00111222 22221 13488999988764 7899998776654 5789999999999999999999998755
Q ss_pred ccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCC
Q 018300 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (358)
Q Consensus 292 l~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~ 329 (358)
.. ..|+. ++|++++|++|+++|+. ||+++++++
T Consensus 189 ~~-----~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~ 225 (386)
T PRK06767 189 YL-----QRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTR 225 (386)
T ss_pred cc-----CCchhcCCcEEEecCcceecCCCCceeEEEEeChH
Confidence 43 24556 89999999999998875 799999875
No 80
>PRK05939 hypothetical protein; Provisional
Probab=99.74 E-value=3.8e-17 Score=162.82 Aligned_cols=158 Identities=16% Similarity=0.152 Sum_probs=121.2
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.+.|+ |++.++.+|+. ++++.|.++ .+.++||+.|+..++.++++|||+|+++++.|+++....
T Consensus 38 ~~~Y~r~--g~p~~~~lE~~----la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~--- 103 (397)
T PRK05939 38 GFTYARQ--GTPTTAALEAK----ITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLF--- 103 (397)
T ss_pred CCCcCCC--CCHHHHHHHHH----HHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHH---
Confidence 3444443 77888888774 788999887 377889999999999999999999999998887764321
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
..+...|. ++..++. .|++++++.++. ++|+|+++.+++ +...|+++|+++|+++|+++++|++|+.
T Consensus 104 --~~l~~~G~--~v~~v~~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~ 172 (397)
T PRK05939 104 --GTLRGLGV--EVTMVDA------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTS 172 (397)
T ss_pred --HHHHhcCC--EEEEECC------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccc
Confidence 12334455 3444332 388999998864 789998876655 4578999999999999999999999986
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccCc
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR 320 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~ 320 (358)
+.. ..+.+ |+|++++|+||++.|+.
T Consensus 173 ~~~-----~~~~~~gaDivv~S~sK~~~g~g 198 (397)
T PRK05939 173 PWL-----FRPKDVGASLVINSLSKYIAGHG 198 (397)
T ss_pred ccc-----cCccccCCEEEEecCeecccCCC
Confidence 643 24555 89999999999998753
No 81
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.74 E-value=6.9e-17 Score=156.61 Aligned_cols=253 Identities=16% Similarity=0.091 Sum_probs=169.4
Q ss_pred cccccccChHHHHHHHHHHHHhhhccccc--ccCCCCcHHHHHHHhhhhhccc-CCCCCCCcCCCCcHHHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQFKSLELI--ASENFTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKR 156 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~~~~i~li--as~n~~s~~V~~al~~~l~~~~-~~G~pg~r~~~G~~~~~~lE~~~~~~ 156 (358)
.+++....|++|..+.+...+....-.|- -++..+|+.|.+++........ .+++++ || .+ ++.+..++.
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~---~G-~p---~L~~aL~k~ 81 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRG---YG-LP---QLRKALAKA 81 (420)
T ss_pred cccccccCCcHHHHHHHHHHhcCCCCcccCCCCCCCCcHHHHHHHHHHhccchhcccccc---CC-ch---HHHHHHHHH
Confidence 56778888899998887655543211132 3355678889999877665442 122222 33 33 455566677
Q ss_pred HHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece-----
Q 018300 157 ALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR----- 230 (358)
Q Consensus 157 la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~----- 230 (358)
+++++|.... ...+|++++|. +|+..++.+++++||+|++.+|-+.++.. .+.+.|.....++..
T Consensus 82 ~se~~~~~~~-~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~--------~~~maG~tpv~v~~~~~~g~ 152 (420)
T KOG0257|consen 82 YSEFYGGLLD-PDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIP--------QVVMAGGTPVFVPLKPKEGN 152 (420)
T ss_pred HHHHhccccC-CcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhh--------HHhhcCCcceeecccccccc
Confidence 8888886531 11357777776 59999999999999999999987666532 345666543344322
Q ss_pred ecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC-----CCCHHHHHHHHHHcCCEEEEeccccccccccCC-ccC--CC
Q 018300 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PF 302 (358)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~-----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~--pl 302 (358)
+...+..+|.++++..+.+ |+|+|+++.++||+ ...+++|+++|++||.++++|+++. -+++.+. +++ .+
T Consensus 153 ~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe-~~v~d~~~h~r~asl 230 (420)
T KOG0257|consen 153 VSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYE-WLVYDGNKHIRIASL 230 (420)
T ss_pred ccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhH-HHhhCCCcceeeecC
Confidence 0134568999999999875 89999998888764 3458999999999999999999865 3444442 221 11
Q ss_pred CC---CcEEEEcCcCcC--ccCcEEEEEEeCCCC-chhHHHHHHhhccCCcccc
Q 018300 303 KY---CDVVTTTTHKSL--RGPRGGMIFFKKDPV-LGVELESAINNAVFPGLQV 350 (358)
Q Consensus 303 ~g---aDiv~~S~hK~L--~Gp~GG~I~~~~~~~-~~~~~~~~i~~~~f~g~q~ 350 (358)
.| --+.++|+.|++ .|+|-|++++.+.++ ....+++++.+.....+|+
T Consensus 231 Pgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~ 284 (420)
T KOG0257|consen 231 PGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNFVFTCPTPIQE 284 (420)
T ss_pred CchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhccccccCcHHHH
Confidence 22 347789999996 789999999955433 4444555555555555544
No 82
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.73 E-value=6.8e-17 Score=161.19 Aligned_cols=161 Identities=19% Similarity=0.189 Sum_probs=121.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++...++|+ ++++++|.+. .+.++||+.|+.+++.++++|||+|+++++.|++++.... ..+...|
T Consensus 62 ~~p~~~~Le~----~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G 128 (400)
T PRK06234 62 GNPTSTEVEN----KLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLN----HGLTRYG 128 (400)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH----HHHhhCC
Confidence 3444556665 4788999764 3678899999999999999999999999887766433110 1123445
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHc--CCEEEEeccccccccccCC
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAV--GALLMMDMAHISGLVAASV 297 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~ 297 (358)
. ++..++. .|++++++.+++ ++|+|+++.+++ +...|+++|.++|+++ |+++++|++|+.+..
T Consensus 129 ~--~v~~vd~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~---- 195 (400)
T PRK06234 129 V--EVTFVDT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYI---- 195 (400)
T ss_pred e--EEEEECC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhc----
Confidence 4 4444332 278999998864 789999877665 4578999999999997 999999999886643
Q ss_pred ccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCC
Q 018300 298 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (358)
Q Consensus 298 ~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~ 329 (358)
..+++ ++|++++|++|++.|+. ||+++++++
T Consensus 196 -~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~ 230 (400)
T PRK06234 196 -QRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEE 230 (400)
T ss_pred -CCchhhCCcEEEeeccccccCCCCceeEEEEecHH
Confidence 24556 89999999999998764 699998873
No 83
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.73 E-value=1.6e-16 Score=156.69 Aligned_cols=193 Identities=15% Similarity=0.159 Sum_probs=132.7
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcH---HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE---YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~---~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
..+...+.+++.. |..|+.++|.-.|.. +...+++ .++.+++++|++.. +++++|+.++..++.++
T Consensus 18 g~~~~~~~~a~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~-~~e~lA~~~g~~~~-----~i~~g~~~a~~~~~~~l 86 (370)
T TIGR02539 18 GVLTEAARKALVE-----FGDGYSVCDFCGGRLDQITKPPIHD-FLEDLAEFLGMDEA-----RVTHGAREGKFAVMHAL 86 (370)
T ss_pred CCCcHHHHHHHHH-----HhhccccccccccccccccchHHHH-HHHHHHHHhCCCce-----EEECChHHHHHHHHHHh
Confidence 3456667777654 334566555544432 0112333 34558999999862 34678888999999999
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-CCCCCCHHHHHHHhhh------cCCeEEEEcCCC
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL------FRPKLIIAGASA 261 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~iD~d~le~~i~~------~~~klIi~~~s~ 261 (358)
++|||+|++..+.|.+.+ ..+...|..+.. ++.++ .++.+|++++++.++. .++++|++..++
T Consensus 87 ~~~gd~Vl~~~~~h~s~~--------~~~~~~g~~~~~--~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~ 156 (370)
T TIGR02539 87 CKEGDWVVLDGLAHYTSY--------VAAERAGLNVKE--VPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVD 156 (370)
T ss_pred hCCCCEEEECCcccHHHH--------HHHHHcCCEEEE--EecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCC
Confidence 999999999776543321 123456664444 44442 2467999999998853 257888876544
Q ss_pred --CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCcc-CcEEEEEEeCC
Q 018300 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKD 329 (358)
Q Consensus 262 --~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|+.|... ....+ ++|+++.|+||++++ .+.|+++++++
T Consensus 157 ~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~----~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~ 224 (370)
T TIGR02539 157 GEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP----VSAKEIGADFIVGSGHKSMAASGPCGVLGMSEE 224 (370)
T ss_pred CCCccccCHHHHHHHHHHcCCeEEEECccccCCcC----CCHHHcCCCEEEeeCcccccCCCCEEEEEECHH
Confidence 567889999999999999999999999976321 11122 689999999999853 33589988774
No 84
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=6.4e-17 Score=161.28 Aligned_cols=160 Identities=20% Similarity=0.247 Sum_probs=119.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++.++++|+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++...... ..+...|
T Consensus 62 ~~p~~~~le~----~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~----~~~~~~G 128 (398)
T PRK08249 62 TNPTVQAFEE----KVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFT----EFLPRMG 128 (398)
T ss_pred CChHHHHHHH----HHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHH----HHHhhCC
Confidence 4566666665 4788999876 3778999999999999999999999999887766422100 0122334
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++ ..|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|++|+.+.. .
T Consensus 129 i--~v~~vd------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~-----~ 194 (398)
T PRK08249 129 V--DVTLCE------TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN-----Q 194 (398)
T ss_pred e--EEEEcC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence 4 333322 3689999998865 7899998766654 578999999999999999999999885532 2
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeC
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~ 328 (358)
.++. ++|++++|++|+++|+. ||++++++
T Consensus 195 ~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~ 227 (398)
T PRK08249 195 NPLALGADLVIHSATKFLSGHADALGGVVCGSK 227 (398)
T ss_pred CchhhCCCEEeccCceecCCCCCceEEEEECCH
Confidence 3455 89999999999998763 68887755
No 85
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=2.7e-17 Score=162.98 Aligned_cols=173 Identities=17% Similarity=0.138 Sum_probs=124.5
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.+.|+ |++.++++|+. ++++.|.++ .+.+.||+.|+.+++.++++|||+|+++...|++.+...
T Consensus 55 ~~~Y~r~--~~P~~~~lE~~----la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~--- 120 (384)
T PRK06434 55 PYIYTRW--GNPTVQAFEEK----YAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF--- 120 (384)
T ss_pred CcceeCC--CChhHHHHHHH----HHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH---
Confidence 3444444 67888888875 788999987 377899999999999999999999999877666654311
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
...+...|. ++..+++++. ..++ +...++|+|+++.+.++ ...|+++|.++|+++| +++|++|+.
T Consensus 121 -~~~~~~~Gi--~v~fvd~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s 187 (384)
T PRK06434 121 -NKVLKTLGI--HVDYIDTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFAS 187 (384)
T ss_pred -HHHHHhcCc--EEEEECCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCC
Confidence 012233454 4555555421 1121 22236889998876654 5789999999999998 567999864
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+. ...|++ ++|++++|+||++.|+. ||+|+++++ ++.+++..
T Consensus 188 ~~-----~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~-----~~~~~~~~ 233 (384)
T PRK06434 188 PY-----NQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK-----SIFNNLVE 233 (384)
T ss_pred cc-----cCCchhcCCCEEEeecccccCCCCCceEEEEecCcH-----HHHHHHHH
Confidence 43 235677 99999999999999865 788988776 66666654
No 86
>PRK05968 hypothetical protein; Provisional
Probab=99.73 E-value=6.1e-17 Score=160.93 Aligned_cols=173 Identities=18% Similarity=0.110 Sum_probs=124.7
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc
Q 018300 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (358)
Q Consensus 134 ~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (358)
+.+.|+ +++.++++|+ ++++++|.+.. +.++||+.|+..++.++++|||+|+++.+.|++.+....
T Consensus 55 ~~Y~r~--~~p~~~~le~----~lA~l~g~~~a-----v~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~--- 120 (389)
T PRK05968 55 PIYSRG--DNPTVRAFEE----MLAKLEGAEDA-----RGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFE--- 120 (389)
T ss_pred ccccCC--CChhHHHHHH----HHHHHhCCCcE-----EEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH---
Confidence 444443 4455666665 47889999863 667899999999999999999999999887776432100
Q ss_pred hhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
..+...|. ++..++. .|++++++.+ .++|+|++..+.++ ...|+++|.++|+++|+++++|++|+.+
T Consensus 121 -~~~~~~G~--~v~~vd~------~d~~~l~~~i--~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~ 189 (389)
T PRK05968 121 -TILKRMGV--EVDYVDG------RDEEAVAKAL--PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASP 189 (389)
T ss_pred -HHHHHcCc--eEEEeCC------CCHHHHHHhc--ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcch
Confidence 12233454 3444322 2889999887 26899988755543 4679999999999999999999999766
Q ss_pred ccccCCccCCCC-CCcEEEEcCcCcCccC---cEEEEEEeCCCCchhHHHHHHhh
Q 018300 292 LVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 292 l~~~g~~~~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.. ..|+. |+|++++|++|++.|| .||+++.++ ++.+++..
T Consensus 190 ~~-----~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~------~~~~~l~~ 233 (389)
T PRK05968 190 VF-----QRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK------EHIARINA 233 (389)
T ss_pred hc-----cCchhcCCcEEEeeccccccCCCCeEEEEEEECH------HHHHHHHH
Confidence 43 23455 8999999999999886 468888666 45555554
No 87
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.73 E-value=2.6e-16 Score=158.71 Aligned_cols=170 Identities=18% Similarity=0.242 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---------ccCCCEEEecCCCCCcccccccccchhc
Q 018300 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---------LKPHDRIMGLDLPHGGHLSHGFMTPKRR 216 (358)
Q Consensus 146 ~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al---------l~pGD~Vl~~~~~~ggh~s~~~~~~~~~ 216 (358)
+.++|+ .+++++|.+. .+.++|||.|+..++.++ ++|||+|+++++.|.++.. .
T Consensus 65 ~~~fe~----~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~--------~ 127 (438)
T PRK15407 65 NDAFEK----KLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN--------P 127 (438)
T ss_pred HHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------H
Confidence 455655 4788999875 366788999999998875 5899999999876654321 2
Q ss_pred cccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccC
Q 018300 217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS 296 (358)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g 296 (358)
+...|. +++.+++++++..+|++++++.+.. ++|+|++.+ .+|...|+++|.++|+++|++|++|++|+.|....|
T Consensus 128 v~~~G~--~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~-~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g 203 (438)
T PRK15407 128 IIQNGL--VPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAH-TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDG 203 (438)
T ss_pred HHHcCC--EEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeC-CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCC
Confidence 334554 5666677766788999999998864 788887754 356678999999999999999999999999987655
Q ss_pred CccCCCC-CCcEEEEcCc--CcCccCcEEEEEEeCCCCchhHHHHHHhhcc
Q 018300 297 VVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAV 344 (358)
Q Consensus 297 ~~~~pl~-gaDiv~~S~h--K~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~~ 344 (358)
.. +. ..|+.++|+| |.+.+..||+|+++++ ++.+++....
T Consensus 204 ~~---~G~~gd~~~fSf~~~k~~~~geGG~l~t~d~-----~l~~~~~~~~ 246 (438)
T PRK15407 204 RM---TGTFGDIATLSFYPAHHITMGEGGAVFTNDP-----LLKKIIESFR 246 (438)
T ss_pred ee---eeccCceEEEeCCCCCCccccCceEEEECCH-----HHHHHHHHHH
Confidence 32 22 3588888887 6676666999999998 7777665543
No 88
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.73 E-value=1.9e-16 Score=136.41 Aligned_cols=163 Identities=25% Similarity=0.276 Sum_probs=113.5
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
++++++++|+.+.. + + ++..+||.|+..++.++.++|++|++.++.|.++.. . .....|. ++..++.+
T Consensus 5 ~~~~l~~~~~~~~~-~-~-~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~--~~~~v~~~ 72 (170)
T cd01494 5 LEEKLARLLQPGND-K-A-VFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGA--KPVPVPVD 72 (170)
T ss_pred HHHHHHHHcCCCCC-c-E-EEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCC--EEEEeccC
Confidence 45678999964432 1 3 445588999999999999999999999887766541 1 2234455 34444444
Q ss_pred CCCC-CCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEE
Q 018300 233 ESTG-LVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVT 309 (358)
Q Consensus 233 ~~~~-~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~ 309 (358)
..+. ..|.+.+++.....+++++++..+++ +...|+++|.++|+++|+++++|++|..+....+.......++|+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~ 152 (170)
T cd01494 73 DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT 152 (170)
T ss_pred CCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEE
Confidence 3222 23333565544445788888876654 34678899999999999999999999876654321111122899999
Q ss_pred EcCcCcCccCcEEEEEEe
Q 018300 310 TTTHKSLRGPRGGMIFFK 327 (358)
Q Consensus 310 ~S~hK~L~Gp~GG~I~~~ 327 (358)
.|+||+|++|++|+|++|
T Consensus 153 ~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 153 FSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEcccccCCCceEEEEeC
Confidence 999999999888999875
No 89
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=1.4e-16 Score=157.69 Aligned_cols=174 Identities=20% Similarity=0.193 Sum_probs=125.6
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc
Q 018300 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (358)
Q Consensus 134 ~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (358)
|.+.|+ +++..+++|+ ++++++|.+. .+.+.||+.|+..++ ++++|||+|+++++.|++.+....
T Consensus 42 ~~y~r~--~~p~~~~Le~----~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~--- 106 (377)
T PRK07671 42 YEYSRT--GNPTRAALEE----LIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMT--- 106 (377)
T ss_pred CCcCCC--CChHHHHHHH----HHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHH---
Confidence 444443 5566666666 4788999876 366889998877655 578999999999987765432100
Q ss_pred hhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
..+...|. ++..++ ..|++++++.+++ ++|+|++..+++| ...|+++|.++|+++|+++++|+++..+
T Consensus 107 -~~~~~~G~--~v~~v~------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~ 176 (377)
T PRK07671 107 -KVLNRFGI--EHTFVD------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTP 176 (377)
T ss_pred -HHHhcCCe--EEEEEC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 11223454 444432 2388999998864 7899988777655 5789999999999999999999998644
Q ss_pred ccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 292 l~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.. ..|++ ++|++++|++|++.||. +|+++++++ ++.+++..
T Consensus 177 ~~-----~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~-----~l~~~~~~ 221 (377)
T PRK07671 177 YW-----QSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP-----ELAEDLHF 221 (377)
T ss_pred cc-----CChhhhCCeEEEecCcccccCCccceeEEEEeCcH-----HHHHHHHH
Confidence 32 24566 89999999999999885 688887765 56666554
No 90
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.73 E-value=1.1e-16 Score=158.83 Aligned_cols=180 Identities=23% Similarity=0.248 Sum_probs=128.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++..+++|+ ++++++|.+. .+.+.||+.|+..++.++++|||+|+++++.|++...... ......+
T Consensus 49 ~~p~~~~le~----~lA~l~g~~~-----v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~----~~~~~~~ 115 (382)
T TIGR02080 49 GNPTRDLLQQ----ALAELEGGAG-----AVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLN----ALAKKGC 115 (382)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH----HHHhhcC
Confidence 4555566665 4788888643 3566788889999999999999999999988876432110 0011112
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..+ + ..|.+++++.++. ++|+|++..+++| ...|+++|.++|+++|+++++|++|+.+.. .
T Consensus 116 ~--~v~~~--d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 181 (382)
T TIGR02080 116 F--RVLFV--D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPAL-----Q 181 (382)
T ss_pred e--EEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2 32221 2 2478999998864 7899988776664 578999999999999999999999876643 2
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhhc-cCCccccccc
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA-VFPGLQVGFV 353 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~~-~f~g~q~~~~ 353 (358)
.|+. ++|++++|++|++.|+. +|+++++++ ++.+++... .+.|...+|+
T Consensus 182 ~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~-----~~~~~l~~~~~~~g~~~sp~ 235 (382)
T TIGR02080 182 NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP-----QVAEELAWWANNLGVTGGAF 235 (382)
T ss_pred CchhhCCCEEEeecceeccCCCCceeEEEEeCCH-----HHHHHHHHHHHccCCCCCHH
Confidence 4556 89999999999998764 688888765 666666543 3335555554
No 91
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.72 E-value=5.2e-17 Score=160.87 Aligned_cols=177 Identities=24% Similarity=0.295 Sum_probs=127.1
Q ss_pred CCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccc
Q 018300 132 EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFM 211 (358)
Q Consensus 132 ~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~ 211 (358)
.++.+.|+ |++..+.+|+. ++++.|.+. .+.+.||+.|+.+++.+++++||+|+.++..|++.....
T Consensus 45 ~~~~Y~R~--gnPt~~~le~~----la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~-- 111 (386)
T PF01053_consen 45 KGYIYSRY--GNPTVRALEQR----LAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLL-- 111 (386)
T ss_dssp SSCSBTTT--C-HHHHHHHHH----HHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHH--
T ss_pred CCcceecc--ccccHHHHHHH----HHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhh--
Confidence 45666665 78888888764 788999876 366789999999999999999999999987777643211
Q ss_pred cchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCCHHHHHHHHHHcC-CEEEEeccc
Q 018300 212 TPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG-ALLMMDMAH 288 (358)
Q Consensus 212 ~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~dl~~I~~ia~e~g-~~livD~Ah 288 (358)
. ......|. ++..+ | .-|++++++.+++ ++++|+++.+.+|. ..|+++|+++||++| +++++|++-
T Consensus 112 ~--~~l~~~gv--~v~~~--d----~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~ 180 (386)
T PF01053_consen 112 E--ELLPRFGV--EVTFV--D----PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTF 180 (386)
T ss_dssp H--HCHHHTTS--EEEEE--S----TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTT
T ss_pred h--hhhcccCc--EEEEe--C----chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccc
Confidence 0 11222454 44443 2 2488999999875 89999999888774 789999999999999 999999985
Q ss_pred cccccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeC-CCCchhHHHHHHhh
Q 018300 289 ISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK-DPVLGVELESAINN 342 (358)
Q Consensus 289 ~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~-~~~~~~~~~~~i~~ 342 (358)
+.+ ....|++ |||+++.|+.|++.|.. ||+|++++ + ++.+++..
T Consensus 181 atp-----~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~-----~~~~~l~~ 229 (386)
T PF01053_consen 181 ATP-----YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS-----ELYDRLRE 229 (386)
T ss_dssp THT-----TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH-----HHHHHHHH
T ss_pred cce-----eeeccCcCCceEEEeeccccccCCcceeeEEEEECchh-----hhhhhhcc
Confidence 544 3346788 99999999999999886 79999876 3 55555543
No 92
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=9.3e-17 Score=161.21 Aligned_cols=159 Identities=16% Similarity=0.193 Sum_probs=121.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
|++.++.+|+. ++++.|.+++ +.+.||+.|+.+++.++++|||+|+++.+.|++..... . ..+...|
T Consensus 59 ~nPtv~~lE~~----la~leg~~~a-----v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~--~--~~l~~~G 125 (432)
T PRK06702 59 GNPTLAAFEQK----LAELEGGVGA-----VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLF--G--VSLRKLG 125 (432)
T ss_pred CCcHHHHHHHH----HHHHhCCCcE-----EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH--H--HHHHHCC
Confidence 56777777764 7889999873 67899999999999999999999999988777643210 0 1123446
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++ ..+|++++++++++ ++|+|+++.+.+|. ..|+++|+++|+++|+++++|++.+.. ...
T Consensus 126 i--~v~~vd-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP-----~~~ 192 (432)
T PRK06702 126 I--DVTFFN-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP-----YLC 192 (432)
T ss_pred C--EEEEEC-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch-----hhC
Confidence 5 444432 24789999999875 79999987766664 679999999999999999999986433 234
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEE
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~ 326 (358)
.|++ |||+++.|++|++.|+. ||+++.
T Consensus 193 ~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 193 QAFEHGANIIVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred ChhhcCCCEEEEccccccCCCcceeceEEEe
Confidence 6777 99999999999998876 366664
No 93
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.72 E-value=3.8e-16 Score=151.58 Aligned_cols=195 Identities=17% Similarity=0.156 Sum_probs=134.6
Q ss_pred cccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHH
Q 018300 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (358)
Q Consensus 106 ~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~ 185 (358)
.+.|++..+++.|++++.... +++ ...+.+.+++ +++.+++++|+++... ..+.+.+||.++..++
T Consensus 2 ~~~p~p~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~-~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~ 67 (355)
T TIGR03301 2 LLTPGPLSTSATVRDAMLVDW-CHW-----------DSEFNDVTDQ-VRDRLLALAGGDDNHT-CVLLQGSGTFAVEATI 67 (355)
T ss_pred cCcCCCCCCCHHHHHHhhhhc-cCC-----------CHHHHHHHHH-HHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHH
Confidence 467889999999999997632 111 1122334444 6888999999986421 1234678999999999
Q ss_pred HHhccCCCEEEecCCC-CCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-CCeEEEEcC--CC
Q 018300 186 TAILKPHDRIMGLDLP-HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGA--SA 261 (358)
Q Consensus 186 ~all~pGD~Vl~~~~~-~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-~~klIi~~~--s~ 261 (358)
.+++++||+|++.+.. ++..+. ......|..+ ..++.+ +++.+|++++++.++.. ++++|++.. +.
T Consensus 68 ~~~~~~~~~vi~~~~~~~~~~~~-------~~a~~~g~~~--~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 137 (355)
T TIGR03301 68 GSLVPRDGKLLVLINGAYGERLA-------KICEYLGIPH--TDLNFS-EYEPPDLNRIEEALAADPDITHVATVHHETT 137 (355)
T ss_pred HhccCCCCeEEEECCCchhhHHH-------HHHHHcCCce--EEEecC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCc
Confidence 9999999987765432 221110 1123345544 344444 34688999999988642 345555433 33
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||+|.||.| |+++.+++
T Consensus 138 ~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~-----~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~ 203 (355)
T TIGR03301 138 TGILNPLEAIAKVARSHGAVLIVDAMSSFGAI-----PIDIEELDVDALIASANKCLEGVPGFGFVIARRD 203 (355)
T ss_pred ccchhHHHHHHHHHHHcCCEEEEEeccccCCc-----ccchhhcCccEEEecCCcccccCCceeEEEECHH
Confidence 57788999999999999999999999887642 22233 789999999999988877 89988874
No 94
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.72 E-value=1.2e-16 Score=157.49 Aligned_cols=174 Identities=20% Similarity=0.221 Sum_probs=126.6
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
||.+.|| +++..+++|+. +++++|++. .+.+.||+.|+..++ ++++|||+|++.++.|++.....
T Consensus 43 ~~~y~r~--~~pt~~~le~~----la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~--- 107 (366)
T PRK08247 43 GFDYSRT--GNPTRGVLEQA----IADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLF--- 107 (366)
T ss_pred CccccCC--CCchHHHHHHH----HHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHH---
Confidence 4555554 55666677764 789999987 367889999998765 67899999999988777642210
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
...+...|. ++..++ ..|++++++.+++ ++|+|++..+++|. ..|+++|.++|+++|+++++|+++..
T Consensus 108 -~~~~~~~G~--~v~~vd------~~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~ 177 (366)
T PRK08247 108 -EEHWKKWNV--RFVYVN------TASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYT 177 (366)
T ss_pred -HHHhhccCc--eEEEEC------CCCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 011223454 344432 2488999998865 78999987777663 57899999999999999999999865
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccC---cEEEEEEeCCCCchhHHHHHHh
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
++. ..|++ ++|++++|++|++.|+ .+|+++++++ ++.+++.
T Consensus 178 ~~~-----~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-----~l~~~~~ 222 (366)
T PRK08247 178 PVL-----QRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-----ELCERLA 222 (366)
T ss_pred ccc-----cCchhcCCcEEEeecceeccCCCceeeeEEecChH-----HHHHHHH
Confidence 543 23555 8999999999999886 5799888754 5555544
No 95
>PLN02509 cystathionine beta-lyase
Probab=99.72 E-value=1.2e-16 Score=161.66 Aligned_cols=160 Identities=21% Similarity=0.223 Sum_probs=118.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
|++..+.+|+ ++++++|.+. .+.++||+.|+.+++ .+++|||+|+++++.|+++..... ..+...|
T Consensus 131 gnpt~~aLE~----~lA~leg~e~-----ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~----~~l~~~G 196 (464)
T PLN02509 131 GNPTRDALES----LLAKLDKADR-----AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSG 196 (464)
T ss_pred CCHHHHHHHH----HHHHHhCCCE-----EEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHH----HHHHHCC
Confidence 6776666665 4778888765 366789988876544 679999999999888776531100 0122345
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++ ..|++++++.+.. ++|+|++..+++ +...|+++|.++|+++|+++++|++|+.+.. .
T Consensus 197 ~--~v~~vd------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-----~ 262 (464)
T PLN02509 197 V--VVKRVN------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL-----S 262 (464)
T ss_pred e--EEEEeC------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 4 333432 2478999988864 789998876665 4678999999999999999999999987754 2
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeCC
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~ 329 (358)
.+++ ++|++++|++|+|.|+. ||+++++++
T Consensus 263 ~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~ 296 (464)
T PLN02509 263 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 296 (464)
T ss_pred ChhhcCCcEEEecCcccccCCCccceeEEEeccH
Confidence 4566 89999999999999865 688887765
No 96
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.72 E-value=4e-16 Score=156.77 Aligned_cols=200 Identities=10% Similarity=0.011 Sum_probs=138.8
Q ss_pred CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC-C-CCCcceEEeCCCHHHHHHHHHHh
Q 018300 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-E-NKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 111 ~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~-~-~~~~v~V~~~SGt~A~~~a~~al 188 (358)
..++.|.+.+++.+.+...+ |+|.+ .|.. . ++|+.+++++++++|++ . ++. ..+++++||+||+.++.+.
T Consensus 50 tt~~~p~~~~~~~~~l~~~~--~np~s---~~~~-~-~le~~~~~~la~llg~~~~~~~~-~g~~TsGgTEAn~~al~~a 121 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNM--IDKDE---YPQT-A-EIENRCVNMLADLWHAPAKDAEA-VGTSTIGSSEAIMLGGLAM 121 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCC--CCccc---CccH-H-HHHHHHHHHHHHHhCCCCCCCCC-eEEEechHHHHHHHHHHHH
Confidence 46678889999988775433 45542 2332 2 78889999999999998 2 232 2233567889999988654
Q ss_pred c--------cCC-----CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEE
Q 018300 189 L--------KPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (358)
Q Consensus 189 l--------~pG-----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klI 255 (358)
. +.| -+|++++.+|.+.. +.....|. ++..++++++++.+|+++|++.+++ ++.+|
T Consensus 122 r~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~--------ka~~~lg~--~v~~i~~d~~~~~vd~~~L~~~i~~-~t~lV 190 (431)
T TIGR01788 122 KWRWRKRMEAAGKPTDKPNLVMGSNVQVCWE--------KFARYFDV--ELREVPMDPGRYVIDPEQVVEAVDE-NTIGV 190 (431)
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCcchHHHH--------HHHHHcCc--eeEEEecCCCceeeCHHHHHHHHhh-CCeEE
Confidence 2 112 36777776443321 23334454 3444556653458999999999875 67777
Q ss_pred EEcC--CCCCCCCCHHHHHHHHHHc------CCEEEEeccccccccc--cCCccCCC--CCCcEEEEcCcCcCccCcE-E
Q 018300 256 IAGA--SAYPRDFDYPRMRQIADAV------GALLMMDMAHISGLVA--ASVVADPF--KYCDVVTTTTHKSLRGPRG-G 322 (358)
Q Consensus 256 i~~~--s~~~~~~dl~~I~~ia~e~------g~~livD~Ah~~Gl~~--~g~~~~pl--~gaDiv~~S~hK~L~Gp~G-G 322 (358)
++.. +..|...|+++|.++|+++ |+++++|+||+.+... .+..+..+ .++|.+++|+||++.||.| |
T Consensus 191 ~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G 270 (431)
T TIGR01788 191 VCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVG 270 (431)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcE
Confidence 6643 3467899999999999999 9999999999855431 12223333 3899999999999889998 8
Q ss_pred EEEEeCC
Q 018300 323 MIFFKKD 329 (358)
Q Consensus 323 ~I~~~~~ 329 (358)
+++.+++
T Consensus 271 ~l~~r~~ 277 (431)
T TIGR01788 271 WVIWRDE 277 (431)
T ss_pred EEEEeCh
Confidence 8888875
No 97
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.72 E-value=1.3e-16 Score=159.09 Aligned_cols=208 Identities=16% Similarity=0.112 Sum_probs=130.8
Q ss_pred cccc-ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 105 i~li-as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
+.|- .+-.++|+.|++++...+.. +..+..+.++.+...+. .+++..+ .+ +++|+++++ .++..|+|.++..
T Consensus 29 iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~l~g~~~~~---v~~~~~~t~~l~~ 101 (406)
T TIGR01814 29 IYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGHNTGKAPWF-TLDESLL-KL-RLVGAKEDE---VVVMNTLTINLHL 101 (406)
T ss_pred EEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccCccCCCChh-hhhhhhc-cc-cccCCCCCc---EEEeCCchHHHHH
Confidence 4444 45557799999999876543 32111111121111112 2233223 34 799998753 2455567779999
Q ss_pred HHHHhccCCC---EEEecCCCCCcccccccccchhccccCCceEE--EEeceecCCCCCCCHHHHHHHhhh--cCCeEEE
Q 018300 184 VYTAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE--SMPYRLDESTGLVDYDMLEKTAIL--FRPKLII 256 (358)
Q Consensus 184 a~~all~pGD---~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~iD~d~le~~i~~--~~~klIi 256 (358)
++.++++||| +|++.+.+|.+... .+. ..+...|..++ ...++.+ +++.+|++++++.++. .++++|+
T Consensus 102 ~~~~~~~~~~~~~~i~~~~~~~~s~~~-~~~---~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~lv~ 176 (406)
T TIGR01814 102 LLASFYKPTPKRYKILLEAKAFPSDHY-AIE---SQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIAVIL 176 (406)
T ss_pred HHHHhcCCcCCccEEEecCCCCChHHH-HHH---HHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeEEEE
Confidence 8988877753 57776666554221 110 01223354331 1233333 3467899999887742 3678887
Q ss_pred EcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 257 AGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 257 ~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
+.+.+ .|...|+++|.++|+++|+++++|++|++|.. +..++ ++|++++|+||||.||.||+++..++
T Consensus 177 ~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~-----~id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~ 248 (406)
T TIGR01814 177 LSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV-----PLDLHDWGVDFACWCTYKYLNAGPGAGAFVHEK 248 (406)
T ss_pred EeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc-----ccccccCCCCEEEEcCccccCCCCCeEEEEehh
Confidence 76543 47889999999999999999999999998865 22333 89999999999997666766666553
No 98
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.72 E-value=1.5e-16 Score=153.57 Aligned_cols=202 Identities=18% Similarity=0.189 Sum_probs=131.0
Q ss_pred ccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHH
Q 018300 109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (358)
Q Consensus 109 as~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~ 186 (358)
.+||+ +++.+++++....... . +| +..+..++ .++++++++| +. ..+++.+||+|+..++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~~-----~--~~-~~~~~~~~----l~~~~a~~~g-~~----~~~~~~~gt~a~~~~~~ 65 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVGD-----D--VY-GEDPTTAK----LEARAAELFG-KE----AALFVPSGTAANQLALA 65 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccCC-----c--cc-CCCHHHHH----HHHHHHHHhC-CC----eEEEecCchHHHHHHHH
Confidence 35554 5889999987643211 1 12 22232333 4556888999 33 25677899999999999
Q ss_pred HhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh------cCCeEEEEcCC
Q 018300 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLIIAGAS 260 (358)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~------~~~klIi~~~s 260 (358)
++++|||+|++.++.|.++..... .....|. ++..++.+ ++.+|++++++++.+ .++++|++..+
T Consensus 66 ~l~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 66 AHTQPGGSVICHETAHIYTDEAGA-----PEFLSGV--KLLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred HhcCCCCeEEEecCcceeeecCCc-----HHHHcCc--eEEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 999999999998876554321100 1123455 34444443 367999999998864 26788877554
Q ss_pred CC-CC---CCCHHHHHHHHHHcCCEEEEeccccccccc-cCCccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCCCCchh
Q 018300 261 AY-PR---DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 334 (358)
Q Consensus 261 ~~-~~---~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~-~g~~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~ 334 (358)
++ +. ..|+++|.++|+++|+++++|+||..+... .+.....+. ++|+++.|+||+++.|.|++++.++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~------ 210 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR------ 210 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH------
Confidence 43 33 245788999999999999999998654321 121111122 7899999999999877666555555
Q ss_pred HHHHHHhh
Q 018300 335 ELESAINN 342 (358)
Q Consensus 335 ~~~~~i~~ 342 (358)
++.+++..
T Consensus 211 ~~~~~~~~ 218 (338)
T cd06502 211 DFIARARR 218 (338)
T ss_pred HHHHHHHH
Confidence 45555543
No 99
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.71 E-value=3.8e-16 Score=155.39 Aligned_cols=197 Identities=16% Similarity=0.170 Sum_probs=135.1
Q ss_pred ccCCCC----cHHHHHHHhhhhhcccCCCCCCCcCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 109 ASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 109 as~n~~----s~~V~~al~~~l~~~~~~G~pg~r~~~G~-~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
++++|. +|.++++....+. +|..|+.+.|.+.|+ ....++| +++++++|.+. .+.++||+.|+..
T Consensus 4 ~s~dyLgl~~~~~~~~~~~~a~~-~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~ 73 (392)
T PLN03227 4 ATHDFLSTSSSPTLRQTALESLS-HYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSS 73 (392)
T ss_pred cCcCccCCCCCHHHHHHHHHHHH-HhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHH
Confidence 566664 7889999887764 566677776655443 4344554 45899999986 3778999999999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh----------cCCe
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----------FRPK 253 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~----------~~~k 253 (358)
++.++++|||+|++.+..|++... .+.+.+. ++..++.+ ..-|++.+.+.+.. .+++
T Consensus 74 ~i~~l~~~GD~Vl~~~~~h~s~~~--------~~~l~~~--~~~~~~~~---d~~~l~~~~~~i~~~~~a~~~~~~~~t~ 140 (392)
T PLN03227 74 TVAAFAKRGDLLVVDRGVNEALLV--------GVSLSRA--NVRWFRHN---DMKDLRRVLEQVRAQDVALKRKPTDQRR 140 (392)
T ss_pred HHHHhCCCCCEEEEeccccHHHHH--------HHHHcCC--eEEEeCCC---CHHHHHHHHHHhhhhccccccccCCCcE
Confidence 999999999999999876655321 2223333 33333322 11233333333321 1467
Q ss_pred EEEEcCCC--CCCCCCHHHHHHHHHHcCCEEEEecccccccccc---CCcc----CCCCCCcEEEEcCcCcCccCcEEEE
Q 018300 254 LIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA----DPFKYCDVVTTTTHKSLRGPRGGMI 324 (358)
Q Consensus 254 lIi~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~---g~~~----~pl~gaDiv~~S~hK~L~Gp~GG~I 324 (358)
+|+++... .|...|+++|.++|+++|+++++|++|++|.... +... .|..++|++++|++|.+ ||.||++
T Consensus 141 ~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~gg~v 219 (392)
T PLN03227 141 FLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVGGMT 219 (392)
T ss_pred EEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccCcEE
Confidence 88887543 4678899999999999999999999998775432 1110 23347899999999975 6999999
Q ss_pred EEeCC
Q 018300 325 FFKKD 329 (358)
Q Consensus 325 ~~~~~ 329 (358)
+++++
T Consensus 220 ~~~~~ 224 (392)
T PLN03227 220 VGSEE 224 (392)
T ss_pred ecCHH
Confidence 88773
No 100
>PLN02242 methionine gamma-lyase
Probab=99.71 E-value=1.3e-16 Score=159.86 Aligned_cols=162 Identities=17% Similarity=0.149 Sum_probs=118.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++.++++|+. +++++|.+.. +.+.||+.|+..++.++++|||+|++.++.|+++..... . ......|
T Consensus 74 ~~Pt~~~LE~~----lA~l~g~~~~-----l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~--~-~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLGRQ----MAALEGTEAA-----YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLA--H-FLPRKCN 141 (418)
T ss_pred CChhHHHHHHH----HHHHhCCCeE-----EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHH--H-hhhhccC
Confidence 56777777764 7889999873 567899999999999999999999998877765422100 0 0011234
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++ ..|++++++.++..++|+|+++.+++| ...|+++|.++|+++|++|++|++|... ..
T Consensus 142 ~--~~~~~d------~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~-~~----- 207 (418)
T PLN02242 142 I--TTTFVD------ITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPM-VL----- 207 (418)
T ss_pred c--eEEEcC------CCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCcc-CC-----
Confidence 3 333322 238899999886535899988776654 5789999999999999999999998632 21
Q ss_pred CCCC-CCcEEEEcCcCcCccC--c-EEEEEEeCC
Q 018300 300 DPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKD 329 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp--~-GG~I~~~~~ 329 (358)
.+.+ ++|++++|++|++.|+ + ||+++++++
T Consensus 208 ~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~ 241 (418)
T PLN02242 208 SPARLGADVVVHSISKFISGGADIIAGAVCGPAE 241 (418)
T ss_pred CHHHcCCcEEEEeCccccCCCCCceEEEEEcCHH
Confidence 3344 7999999999999665 3 799998763
No 101
>PLN00175 aminotransferase family protein; Provisional
Probab=99.71 E-value=6.4e-16 Score=154.73 Aligned_cols=230 Identities=14% Similarity=0.058 Sum_probs=153.5
Q ss_pred hcccccccChHHHHHHHHHHHHhhhccccc--ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKERQFKSLELI--ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~~~~~i~li--as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~ 156 (358)
+.+++..++++.+..+.+.... ..-++|- .++..+++.+++++...+.+. ..+|+. ..|.+ ++++.+.++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~~Y~~---~~G~~---~Lr~aia~~ 103 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLAIK-HGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KNQYAR---GFGVP---ELNSAIAER 103 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHhhc-CCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCC---CCCCH---HHHHHHHHH
Confidence 4677788888877665554332 2444544 233456888999988776542 123432 12433 577777777
Q ss_pred HHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC
Q 018300 157 ALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (358)
Q Consensus 157 la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 235 (358)
+.+.+|.+-+ +..+|.+++|+ +|+..++.++++|||+|++.++.|..+.. .+...|. +++++++++++
T Consensus 104 ~~~~~g~~~~-~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~ 172 (413)
T PLN00175 104 FKKDTGLVVD-PEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA--------TLSMAGA--KIKTVTLRPPD 172 (413)
T ss_pred HHHHhCCCCC-CCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEEECCccc
Confidence 7777776421 11136666664 69999999999999999999886655421 2345565 44555566555
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCCccC--CCCC---C
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFKY---C 305 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~g---a 305 (358)
+.+|+++|++.+.. ++|+|++..+++|+ .. ++++|.++|+++|+++++|+++. .+.+.+...+ .+++ -
T Consensus 173 ~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~s~~~~~~~~~~ 250 (413)
T PLN00175 173 FAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYD-KLAFEGDHISMASLPGMYER 250 (413)
T ss_pred CCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccC-ccccCCcccChhhCCCCcCc
Confidence 78999999998764 68998887777654 44 47789999999999999999975 4443332111 1222 2
Q ss_pred cEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 306 DVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 306 Div~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.+++.|++|.+ +|.|.|+++++++
T Consensus 251 vi~i~SfSK~~~~~G~RiG~~v~~~~ 276 (413)
T PLN00175 251 TVTMNSLGKTFSLTGWKIGWAIAPPH 276 (413)
T ss_pred EEEEecchhhccCcchheeeeEeCHH
Confidence 37789999997 6788899999874
No 102
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=1.3e-16 Score=160.54 Aligned_cols=160 Identities=20% Similarity=0.158 Sum_probs=118.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++.++++|+ ++++++|.+. .+.+.||+.|+.+++.++++|||+|++.+..|++...-. ...+...|
T Consensus 67 ~~p~~~~Le~----~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~----~~~l~~~G 133 (436)
T PRK07812 67 MNPTQDVVEQ----RIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLF----HYTLPKLG 133 (436)
T ss_pred CCchHHHHHH----HHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHH----HHHhhcCe
Confidence 4555666665 4888999987 377889999999999999999999999887776642100 00112233
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
+++..++ + ..|++++++.+++ ++++|++..+++ +...|+++|.++||++|+++++|++|+.+.. +
T Consensus 134 --i~v~~vd-d----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-----~ 200 (436)
T PRK07812 134 --IEVSFVE-D----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-----I 200 (436)
T ss_pred --EEEEEEC-C----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3444432 2 2389999988764 789998876654 5689999999999999999999999987644 3
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEe
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFK 327 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~ 327 (358)
.+++ |+|++++|+||+++|+. ||+++.+
T Consensus 201 ~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~ 232 (436)
T PRK07812 201 RPLEHGADIVVHSATKYLGGHGTAIAGVIVDG 232 (436)
T ss_pred CchhcCCCEEEEecccccCCCCCeEEEEEEcC
Confidence 5666 99999999999998764 3555543
No 103
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.71 E-value=7e-16 Score=151.03 Aligned_cols=220 Identities=19% Similarity=0.202 Sum_probs=141.5
Q ss_pred ChHHHHHHHHHHHHhh--hcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC
Q 018300 87 DPEVCEIITKEKERQF--KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD 164 (358)
Q Consensus 87 d~~~~~~i~~e~~~~~--~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~ 164 (358)
+.++++++++..++.. ..+ +-....+..|.+.+++...+.... +.+. .+.+. .++++.+++++++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~--~~~~--~~~~~---~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 4 EEEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNL--GDPG--LFPGT---AKLEEEAVEMLGELLHLP 75 (371)
T ss_pred HHHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCC--CCcc--cCccH---HHHHHHHHHHHHHHhCCC
Confidence 4566666655444322 212 323456778888999887665432 3332 23332 245556888999999987
Q ss_pred CCCCcceEEeCCCHHHHHHHHHHhcc----CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCH
Q 018300 165 ENKWGVNVQPLSGSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (358)
Q Consensus 165 ~~~~~v~V~~~SGt~A~~~a~~all~----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~ 240 (358)
.. ..+++.+|+.|+..++.++.+ +||+|++++.. |.++. +.+...|..+..++ .+ +++.+|+
T Consensus 76 ~~---~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~---h~s~~-----~~~~~~g~~~~~v~--~~-~~~~~d~ 141 (371)
T PRK13520 76 DA---YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESA---HFSFD-----KAADMLGVELRRAP--LD-DDYRVDV 141 (371)
T ss_pred CC---CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcc---hHHHH-----HHHHHcCceEEEec--CC-CCCcCCH
Confidence 63 135566788899988876643 68999998764 43321 12344565444444 44 3568999
Q ss_pred HHHHHHhhhcCCeEEEE-cC-CCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCC--CCCcEEEEcCcC
Q 018300 241 DMLEKTAILFRPKLIIA-GA-SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF--KYCDVVTTTTHK 314 (358)
Q Consensus 241 d~le~~i~~~~~klIi~-~~-s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl--~gaDiv~~S~hK 314 (358)
++|++.+++ ++++|++ .. +.+|...|+++|.++|+++|+++++|++|+.+........ ..+ .++|.+++|+||
T Consensus 142 ~~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K 220 (371)
T PRK13520 142 KAVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHK 220 (371)
T ss_pred HHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcc
Confidence 999999875 5655543 32 3467889999999999999999999999985542111111 112 278999999999
Q ss_pred cCccC-cEEEEEEeCC
Q 018300 315 SLRGP-RGGMIFFKKD 329 (358)
Q Consensus 315 ~L~Gp-~GG~I~~~~~ 329 (358)
++.+| ++|+++.+++
T Consensus 221 ~~~a~~~~G~~~~~~~ 236 (371)
T PRK13520 221 MGLAPIPAGGILFRDE 236 (371)
T ss_pred ccCccCCceEEEEcCH
Confidence 87544 4465665554
No 104
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.71 E-value=2.9e-16 Score=169.20 Aligned_cols=214 Identities=15% Similarity=0.127 Sum_probs=137.4
Q ss_pred ccCCCCcHH-HHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-CCHHHHHHHHH
Q 018300 109 ASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYT 186 (358)
Q Consensus 109 as~n~~s~~-V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~-SGt~A~~~a~~ 186 (358)
++.+++++. |.+++...+.+.+ ++|++.+..+....+.+++ +|++++++||+++.++ .|.++ ++|.|+..+..
T Consensus 41 Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s~~~~~~~e~-aR~~ia~~lga~~~~~--~VvFtsnaT~alnlva~ 115 (805)
T PLN02724 41 AGATLYSESQLEAALADFSSNVY--GNPHSQSDSSMRSSDTIES-ARQQVLEYFNAPPSDY--ACVFTSGATAALKLVGE 115 (805)
T ss_pred CCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchhhhHHHHHHH-HHHHHHHHhCCCccce--EEEEeCChHHHHHHHHH
Confidence 445565654 4554444444333 4555444445555556665 8999999999976432 34555 56679999988
Q ss_pred Hh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-----CCCCCCH--HHHHHHhh---------h
Q 018300 187 AI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-----STGLVDY--DMLEKTAI---------L 249 (358)
Q Consensus 187 al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~iD~--d~le~~i~---------~ 249 (358)
++ +++||+|+++..+|.+.+. .+ ..+...|..++.++++.+. +.+.+|. +++++.++ .
T Consensus 116 ~l~~~~gd~Iv~t~~eH~svl~-~~----~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~ 190 (805)
T PLN02724 116 TFPWSSESHFCYTLENHNSVLG-IR----EYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDG 190 (805)
T ss_pred HCCCCCCCeEEEeeccccchHH-HH----HHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccC
Confidence 88 8999999998888876542 11 1223346555554432111 2234443 56766531 1
Q ss_pred cCCeEEEEcC-CC-CCCCCCHHHHHHHHHHc--------CCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCc
Q 018300 250 FRPKLIIAGA-SA-YPRDFDYPRMRQIADAV--------GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLR 317 (358)
Q Consensus 250 ~~~klIi~~~-s~-~~~~~dl~~I~~ia~e~--------g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~ 317 (358)
.+++||.+.+ ++ +|...|++.|.++++.. ++++++|+||++|.. +..+. ++|++++|+||+++
T Consensus 191 ~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~-----piDv~~~~~Dfl~~S~HK~~G 265 (805)
T PLN02724 191 EAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTS-----PPDLSRYPADFVVVSFYKIFG 265 (805)
T ss_pred CCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCC-----CCChhhcCCCEEEEecceecc
Confidence 2457887754 33 58899999775555532 368999999998865 33343 89999999999988
Q ss_pred cCcE-EEEEEeCCCCchhHHHHHHhhc
Q 018300 318 GPRG-GMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 318 Gp~G-G~I~~~~~~~~~~~~~~~i~~~ 343 (358)
||.| |+++.++ ++.+++...
T Consensus 266 gP~G~G~L~vr~------~~~~~l~p~ 286 (805)
T PLN02724 266 YPTGLGALLVRR------DAAKLLKKK 286 (805)
T ss_pred CCCCceEEEEeh------hhhhhhcCC
Confidence 8998 8998887 444555443
No 105
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=1.2e-16 Score=158.70 Aligned_cols=161 Identities=18% Similarity=0.109 Sum_probs=119.6
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccC
Q 018300 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (358)
Q Consensus 141 ~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (358)
.|++..+.+|+. ++.+.+.+. .+.+.||+.|+.+++.++++|||+|+++++.|+++.... ...+...
T Consensus 61 ~gnPt~~~Le~~----la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~----~~~l~~~ 127 (395)
T PRK05967 61 RGTPTTDALCKA----IDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFC----DTMLKRL 127 (395)
T ss_pred CCChHHHHHHHH----HHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHH----HHHHHhc
Confidence 477877777664 667777654 377889999999999999999999999998777753210 0112344
Q ss_pred CceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 221 g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
|.. +..++.+ +.+++++.+++ ++|+|+++.++++ ...|+++|+++|+++|+++++|++++.++.
T Consensus 128 Gi~--v~~vd~~------~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~----- 193 (395)
T PRK05967 128 GVE--VEYYDPE------IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY----- 193 (395)
T ss_pred CeE--EEEeCCC------CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee-----
Confidence 553 3333221 34778888864 7899999876665 468999999999999999999999765432
Q ss_pred cCCCC-CCcEEEEcCcCcCccCc---EEEEEEeC
Q 018300 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (358)
Q Consensus 299 ~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~ 328 (358)
..|++ |+|+++.|++|+++|.. +|+++.++
T Consensus 194 ~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~ 227 (395)
T PRK05967 194 FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE 227 (395)
T ss_pred cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH
Confidence 36778 99999999999988754 57766554
No 106
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.70 E-value=1.1e-16 Score=153.05 Aligned_cols=194 Identities=20% Similarity=0.156 Sum_probs=139.0
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
...+..+..|.-....++.... .- ...||.++|. +|+..+.+|+ |++.+-|--.. +.+.||..|+..
T Consensus 26 a~PIyqtTsy~F~d~~haa~lF-~l-~~~G~iYsRi--~NPT~~vlE~----RiAaLEGG~aa-----~a~aSG~AA~~~ 92 (426)
T COG2873 26 AVPIYQTTSYVFDDTDHAAALF-GL-KEPGNIYTRI--MNPTTDVLEE----RIAALEGGVAA-----LAVASGQAAITY 92 (426)
T ss_pred ecceeeeeeeecCCHHHHHHHh-CC-CcCCceeeec--cCchHHHHHH----HHHHhhcchhh-----hhhccchHHHHH
Confidence 3445556666644444443322 11 1237777665 6777888876 57888776653 567899999999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~ 263 (358)
++..+.++||+|+..+.-|||....- . ..+...|. ++.++ + ..|++.+++.+++ ++|+|+++.-.+|
T Consensus 93 ai~~la~aGD~iVss~~LYGGT~~lf--~--~tl~~~Gi--~v~fv--d----~~d~~~~~~aI~~-nTkavf~EtigNP 159 (426)
T COG2873 93 AILNLAGAGDNIVSSSKLYGGTYNLF--S--HTLKRLGI--EVRFV--D----PDDPENFEAAIDE-NTKAVFAETIGNP 159 (426)
T ss_pred HHHHhccCCCeeEeeccccCchHHHH--H--HHHHhcCc--EEEEe--C----CCCHHHHHHHhCc-ccceEEEEeccCC
Confidence 99999999999999988899864311 1 01233454 44442 2 3468999999875 8999999876676
Q ss_pred C--CCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeC
Q 018300 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (358)
Q Consensus 264 ~--~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~ 328 (358)
. ..|+++|.++||++|+++++|++-+ .+.+..|++ |+|+|+.|+.||++|.. ||+|+-..
T Consensus 160 ~~~v~Die~ia~iAh~~gvpliVDNT~a-----tpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G 225 (426)
T COG2873 160 GLDVLDIEAIAEIAHRHGVPLIVDNTFA-----TPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGG 225 (426)
T ss_pred CccccCHHHHHHHHHHcCCcEEEecCCC-----cceecchhhcCCCEEEEeecccccCCccccceEEEeCC
Confidence 4 7899999999999999999999743 334457888 99999999999998753 46666443
No 107
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.70 E-value=7.3e-16 Score=152.54 Aligned_cols=165 Identities=18% Similarity=0.143 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccC--CCEEEecCCCCCcccccccccchhccccCC--c
Q 018300 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS--I 222 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~p--GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g--~ 222 (358)
++.+.+++++++++|++.++ + +++.+|+. ++.+++.+++++ ||+|+++++.|+++.. .+...+ .
T Consensus 64 ~~~~~~~~~la~~~g~~~~~--v-~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~--------~~~~~~~~~ 132 (398)
T cd00613 64 QALFELQTMLCELTGMDVAN--A-SLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPA--------VARTRGEPL 132 (398)
T ss_pred HHHHHHHHHHHHHHCCCccc--e-eccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHH--------HHHHhcccC
Confidence 56666788899999997532 2 33455554 555556666776 9999999987776532 112222 0
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCCCCCH-HHHHHHHHHcCCEEEEeccccccccccCCccC
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDY-PRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~~~~dl-~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~ 300 (358)
..++..++++ +++.+|++++++.+.+ ++++|+++.++ .|...|+ ++|+++|+++|+++++|++|..|.... .
T Consensus 133 g~~~~~v~~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~----~ 206 (398)
T cd00613 133 GIEVVEVPSD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLK----P 206 (398)
T ss_pred CcEEEEeccC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCC----C
Confidence 1234444454 2457899999998864 68888776544 4566775 999999999999999999987654210 1
Q ss_pred CCC-CCcEEEEcCcCcC-----ccCcEEEEEEeCC
Q 018300 301 PFK-YCDVVTTTTHKSL-----RGPRGGMIFFKKD 329 (358)
Q Consensus 301 pl~-gaDiv~~S~hK~L-----~Gp~GG~I~~~~~ 329 (358)
+-. ++|++++|+||++ +||++|+++.+++
T Consensus 207 ~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~ 241 (398)
T cd00613 207 PGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKE 241 (398)
T ss_pred hHHcCCCEEEeeccccCCCCCCCCCceeEEEEhhh
Confidence 112 7999999999997 2467789988764
No 108
>PRK12414 putative aminotransferase; Provisional
Probab=99.70 E-value=2.9e-15 Score=148.34 Aligned_cols=229 Identities=15% Similarity=0.183 Sum_probs=147.7
Q ss_pred ccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la 158 (358)
.++..+.+.++..+.+.. .+..-++|-.+++ .+++.+.+++...+.... .+|+. ..|. .++++.++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~---~~lr~~ia~~l~ 80 (384)
T PRK12414 9 SKLPDVGTTIFTVIGQLA-AQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQYAP---MAGI---AALREALAEKTE 80 (384)
T ss_pred HhcccCCccHHHHHHHHH-HhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCcCC---CCCc---HHHHHHHHHHHH
Confidence 344455555655544332 2334456544333 458888888877654321 23322 1233 356677788888
Q ss_pred HHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCC
Q 018300 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (358)
Q Consensus 159 ~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 238 (358)
+++|++.....-.+.+.+|+.|+..++.++++|||+|+++++.|.++.. .+...|. +++.+++++++..+
T Consensus 81 ~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~ 150 (384)
T PRK12414 81 RLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAP--------IVRLQGA--TPVAIKLSPEDFRV 150 (384)
T ss_pred HHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHcCC--EEEEEecCcccccc
Confidence 9999853100012334455679999999999999999999887654321 2234565 45555566545679
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCC--C---CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CC---CcE
Q 018300 239 DYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDV 307 (358)
Q Consensus 239 D~d~le~~i~~~~~klIi~~~s~~~~--~---~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~g---aDi 307 (358)
|++++++.++. ++|+|++..+++|+ . .++++|.++|+++|+++++|+++. .+.+.+....++ +. --+
T Consensus 151 d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~i 228 (384)
T PRK12414 151 NWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYE-HVVFDGARHHSMARHRELAERSV 228 (384)
T ss_pred CHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhh-hccCCCCCccCcccCcCccCcEE
Confidence 99999998864 78988887666654 3 368889999999999999999976 333333211122 11 238
Q ss_pred EEEcCcCcC--ccCcEEEEEEeCC
Q 018300 308 VTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 308 v~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
++.|++|.+ +|.|.|+++++++
T Consensus 229 ~~~SfSK~~~~pGlRiG~~v~~~~ 252 (384)
T PRK12414 229 IVSSFGKSYHVTGWRVGYCLAPAE 252 (384)
T ss_pred EEecccccccCccceEEEEecCHH
Confidence 899999987 6778899998874
No 109
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=2.9e-16 Score=158.04 Aligned_cols=160 Identities=21% Similarity=0.159 Sum_probs=119.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++..+.+|+. ++++.|.+. .+.+.||+.|+..++.++++|||+|+++++.|++.+.. + ...+...|
T Consensus 62 ~~p~~~~Le~~----lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~-~---~~~~~~~G 128 (431)
T PRK08248 62 MNPTTDVFEKR----IAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNL-F---AHTLPKLG 128 (431)
T ss_pred CCchHHHHHHH----HHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHH-H---HHHHHhCC
Confidence 45556667664 788999776 37789999999999999999999999998877664321 0 01123345
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++. .|++++++.+++ ++++|++..+++ +...|+++|.++|+++|+++++|++++.+.. .
T Consensus 129 v--~v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-----~ 194 (431)
T PRK08248 129 I--TVKFVDP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-----L 194 (431)
T ss_pred E--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-----C
Confidence 4 4455432 388999998865 789998876554 4688999999999999999999999875432 3
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeC
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~ 328 (358)
.|++ |+|++++|+||+++||. ||+++.+.
T Consensus 195 ~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 195 RPIEHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred ChhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 4566 99999999999998874 57666544
No 110
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=3e-16 Score=157.65 Aligned_cols=166 Identities=20% Similarity=0.156 Sum_probs=120.6
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc
Q 018300 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (358)
Q Consensus 134 ~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (358)
|.+.|+ +++..+++|+ ++++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|++.....
T Consensus 50 ~~y~r~--~~pt~~~Le~----~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~---- 114 (425)
T PRK06084 50 NIYTRI--MNPTNDVLEQ----RVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLL---- 114 (425)
T ss_pred ccccCC--CCchHHHHHH----HHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHH----
Confidence 444443 4455556665 4788999765 366789999999999999999999999887776543210
Q ss_pred hhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
...+...| +++..++ ..|++++++.+++ ++|+|++..+++ +...|+++|.++|+++|+++++|++|+.+
T Consensus 115 ~~~l~~~g--i~v~~~d------~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~ 185 (425)
T PRK06084 115 AHTLPRIG--IETRFAA------HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATP 185 (425)
T ss_pred HHhcccce--eEEEEEC------CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 00111123 2333322 2489999998864 789998876554 46889999999999999999999999866
Q ss_pred ccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeC
Q 018300 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (358)
Q Consensus 292 l~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~ 328 (358)
.. ..|++ ++|++++|+||+++|+. ||+|+.++
T Consensus 186 ~~-----~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 186 VL-----CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred cc-----CChhhcCCCEEEECchhcccccccceeEEEEeCC
Confidence 43 34566 89999999999998764 67777643
No 111
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.70 E-value=4.3e-16 Score=156.41 Aligned_cols=173 Identities=18% Similarity=0.245 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEE
Q 018300 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (358)
Q Consensus 146 ~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (358)
..++|+. ++++||.++ .+.+.+|+.|+..++.++++|||+|+ +++.+..+. ..+...|. +
T Consensus 55 ~~~Leea----ia~~~g~~~-----vv~t~~Gt~Al~la~~al~~pGD~V~-~~~~f~~~~--------~~i~~~Ga--~ 114 (431)
T cd00617 55 FYDLEDA----VQDLFGFKH-----IIPTHQGRGAENILFSILLKPGRTVP-SNMHFDTTR--------GHIEANGA--V 114 (431)
T ss_pred HHHHHHH----HHHHHCCCe-----EEEcCCHHHHHHHHHHHhCCCCCEEc-cCCcccchH--------HHHHhCCC--E
Confidence 3456654 778999976 36678999999999999999999874 443222111 13445665 4
Q ss_pred EEeceecCC---------CCCCCHHHHHHHhhhc---CCeEEEEcCCCC---CCCCC---HHHHHHHHHHcCCEEEEecc
Q 018300 226 SMPYRLDES---------TGLVDYDMLEKTAILF---RPKLIIAGASAY---PRDFD---YPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 226 ~~~~~~~~~---------~~~iD~d~le~~i~~~---~~klIi~~~s~~---~~~~d---l~~I~~ia~e~g~~livD~A 287 (358)
++.+++++. ++.+|+++|++.+.+. ++++|+++.+++ |...+ +++|.++|+++|++|+.|+|
T Consensus 115 pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaA 194 (431)
T cd00617 115 PVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAA 194 (431)
T ss_pred eEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEch
Confidence 455555432 3569999999998753 367787765554 45554 56789999999999999999
Q ss_pred ccccccc------cCCccCC--------CCCCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 288 HISGLVA------ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 288 h~~Gl~~------~g~~~~p--------l~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
|..+-.. .+....+ +.++|.+++|++|.+.++-||+|+++++ ++.++++..
T Consensus 195 r~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~-----~l~~~~~~~ 259 (431)
T cd00617 195 RFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD-----ELYEEARQR 259 (431)
T ss_pred hhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH-----HHHHHHHHh
Confidence 9865211 1222222 1278999999999998999999999986 677777753
No 112
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.70 E-value=1.1e-15 Score=149.68 Aligned_cols=187 Identities=21% Similarity=0.166 Sum_probs=123.6
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCE
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDR 194 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~ 194 (358)
+|.+.++....+. +|. |.. ++.+..++++++++|.++++ .+.+++|+.||..++.++++|||+
T Consensus 35 ~~~~~~~~~~~~~-~~~----------g~~---~~~~~Le~~lA~~~g~~~e~---ilv~~gg~~a~~~~~~al~~~gd~ 97 (346)
T TIGR03576 35 GFKIDEEDLELLE-TYV----------GPA---IFEEKVQELGREHLGGPEEK---ILVFNRTSSAILATILALEPPGRK 97 (346)
T ss_pred ChhHHHHHHHHHH-Hhc----------CCH---HHHHHHHHHHHHHcCCCcce---EEEECCHHHHHHHHHHHhCCCCCE
Confidence 7888888766543 331 222 23444566789999996542 355677888999999999999999
Q ss_pred EEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCCC---CCHHH
Q 018300 195 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRD---FDYPR 270 (358)
Q Consensus 195 Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~~~---~dl~~ 270 (358)
|+++.++...|.++. ..+.+.|.. +.. . .|+++++. . .++++|++..++ .|.. .|+++
T Consensus 98 Vli~~~d~p~~~s~~-----~~~~l~ga~--~~~--~------~~l~~l~~-~--~~~~lIiitg~s~~G~v~~~~~L~~ 159 (346)
T TIGR03576 98 VVHYLPEKPAHPSIP-----RSCKLAGAE--YFE--S------DELSELKK-I--DGTSLVVITGSTMDLKVVSEEDLKR 159 (346)
T ss_pred EEECCCCCCCchhHH-----HHHHHcCCE--Eec--c------CCHHHHhh-C--cCceEEEEECCCCCCcccCHHHHHH
Confidence 998644444554432 123455543 221 1 24555433 2 357877764433 3333 57899
Q ss_pred HHHHHHHcCCEEEEeccccccccc-cCCccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 271 MRQIADAVGALLMMDMAHISGLVA-ASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 271 I~~ia~e~g~~livD~Ah~~Gl~~-~g~~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
|+++|+++|++|++|+||..|... .+.. .... ++|++++|++|+|+|++||++++++ ++.+.+...
T Consensus 160 i~~la~~~~~~livDEAy~~~~~~~~~~~-~~~~~~~divv~s~SKalaG~r~G~v~~~~------~li~~l~~~ 227 (346)
T TIGR03576 160 VIKQAKSKEAIVLVDDASGARVRRLYGQP-PALDLGADLVVTSTDKLMDGPRGGLLAGRK------ELVDKIKSV 227 (346)
T ss_pred HHHHHHHcCCEEEEECCccccccccCCCC-CHHHcCCcEEEeccchhccccceEEEEeCH------HHHHHHHHh
Confidence 999999999999999999877532 1211 1122 6799999999999999999999987 455555443
No 113
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.69 E-value=1.1e-15 Score=155.81 Aligned_cols=198 Identities=18% Similarity=0.186 Sum_probs=133.3
Q ss_pred ccCCCCcHHHHHHHhhhhh-cccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHH--
Q 018300 109 ASENFTSRAVMEAVGSCLT-NKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY-- 185 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~-~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~-- 185 (358)
.+++.++|.+.+++.+... ..| ..|.......| ..++....++++++++|.+. +.+..++|+.+....+
T Consensus 77 ~~~~~~~p~i~~~~~~~~~~~~~-tpYq~e~~sqG---~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~ 148 (481)
T PRK04366 77 SCTMKYNPKINEKVARLPGFAEL-HPLQPEETVQG---ALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLM 148 (481)
T ss_pred ccCCCCCHHHHHHHHhCcchhcC-CCCCChhhhhH---HHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHH
Confidence 4667789999999876411 111 11211101112 22455667889999999975 4677777876554432
Q ss_pred -H-HhccCCC----EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 186 -T-AILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 186 -~-all~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
. .++++|| +|+++++.|..+.. .+...|..+ +.++++ +++.+|+++|++.+.. ++++|++..
T Consensus 149 ~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~--------~~~~~G~~v--v~v~~~-~~~~~D~e~L~~~i~~-~t~~V~v~~ 216 (481)
T PRK04366 149 IRAYHEARGDTKRTEVIVPDSAHGTNPA--------SAAMAGFKV--VEIPSN-EDGLVDLEALKAAVGE-DTAALMLTN 216 (481)
T ss_pred HHHHhhccCcCCCCEEEEcCCccHhHHH--------HHHHcCCEE--EEeecC-CCCCcCHHHHHhhccc-CCeEEEEeC
Confidence 2 3367787 99999887765532 234556544 444455 3578999999998864 678877765
Q ss_pred CC-CCCC-CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCccCc------EEEEEEeCC
Q 018300 260 SA-YPRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR------GGMIFFKKD 329 (358)
Q Consensus 260 s~-~~~~-~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~------GG~I~~~~~ 329 (358)
++ +|.. .|+++|+++|+++|+++++|+||..++.. .. .+-+ |+|++++++||+|++|. +|++.++++
T Consensus 217 Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g--~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~ 292 (481)
T PRK04366 217 PNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILG--KA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE 292 (481)
T ss_pred CCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcc--cC-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh
Confidence 55 4544 48999999999999999999999866432 12 3334 89999999999987554 367877763
No 114
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=4.4e-16 Score=156.61 Aligned_cols=157 Identities=23% Similarity=0.227 Sum_probs=118.1
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCc
Q 018300 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 143 ~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
++....+|+ ++++++|.+. .+.+.||+.|+.+++.++++|||+|+++++.|++...... ..+...|.
T Consensus 62 ~p~~~~le~----~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~----~~~~~~G~ 128 (427)
T PRK05994 62 NPTNAVLEE----RVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFG----HAFKSFGW 128 (427)
T ss_pred CccHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHH----HHHHhcCc
Confidence 344555655 4788999886 3678999999999999999999999999887776532100 01223454
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccC
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~ 300 (358)
++..++. .|++++++.+.. ++|+|++..+++ +...|+++|.++|+++|+++++|++|+.++. ..
T Consensus 129 --~v~~vd~------~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~~ 194 (427)
T PRK05994 129 --QVRWADA------DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-----IR 194 (427)
T ss_pred --EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 4444322 378999998864 789998876655 4578999999999999999999999986643 35
Q ss_pred CCC-CCcEEEEcCcCcCccCc---EEEEEE
Q 018300 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (358)
Q Consensus 301 pl~-gaDiv~~S~hK~L~Gp~---GG~I~~ 326 (358)
|++ ++|++++|+||+++|+. ||+++.
T Consensus 195 pl~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 195 PIEHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred ccccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 666 99999999999998765 576664
No 115
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.69 E-value=3.9e-16 Score=168.98 Aligned_cols=162 Identities=20% Similarity=0.176 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEeCCCHH---HHHHHHHHhccC-CC----EEEecCCCCCcccccccccchhccccCC
Q 018300 150 ETLCQKRALAAFNLDENKWGVNVQPLSGSP---ANFEVYTAILKP-HD----RIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 150 E~~~~~~la~lfg~~~~~~~v~V~~~SGt~---A~~~a~~all~p-GD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
-..++++++++||.+. +.+++++|++ |++.++.+++++ || +|++++.+|+.++.. ....|
T Consensus 570 ~~~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~--------a~~~G 637 (993)
T PLN02414 570 FEDLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPAS--------AAMCG 637 (993)
T ss_pred HHHHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHH--------HHHCC
Confidence 3347999999999965 5666666654 888899999866 88 899999988877542 23456
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcC-CCCC-CCCCHHHHHHHHHHcCCEEEEeccccccccccCC
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA-SAYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~-s~~~-~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~ 297 (358)
.++ +.++.+ +++.+|+++|+++++.+ ++++|++.+ ++.+ ...|+++|+++||++|+++++|+||..++..
T Consensus 638 ~~v--v~v~~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~--- 711 (993)
T PLN02414 638 MKI--VVVGTD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVG--- 711 (993)
T ss_pred CEE--EEeccC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccC---
Confidence 544 444455 46899999999999752 467776654 4444 4667999999999999999999999887642
Q ss_pred ccCCCC-CCcEEEEcCcCcCccCcE------EEEEEeCC
Q 018300 298 VADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKD 329 (358)
Q Consensus 298 ~~~pl~-gaDiv~~S~hK~L~Gp~G------G~I~~~~~ 329 (358)
...|.+ |+|++++|.||+|++|.| |++.+++.
T Consensus 712 l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~ 750 (993)
T PLN02414 712 LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH 750 (993)
T ss_pred cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh
Confidence 224455 999999999999987763 88887774
No 116
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.69 E-value=1.3e-16 Score=158.29 Aligned_cols=164 Identities=21% Similarity=0.263 Sum_probs=116.2
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
+++.++++||++.+ .+.++||+ +|.+++.++++|||+|++.. ++|.|.. .++.+.|....+++..
T Consensus 71 Ae~~aA~~fGAd~t-----~flvnGsT~g~~a~i~a~~~~gd~VLv~R---N~HkSv~-----~alil~ga~Pvyi~p~- 136 (417)
T PF01276_consen 71 AEELAARAFGADKT-----FFLVNGSTSGNQAMIMALCRPGDKVLVDR---NCHKSVY-----NALILSGAIPVYIPPE- 136 (417)
T ss_dssp HHHHHHHHHTESEE-----EEESSHHHHHHHHHHHHHTTTTCEEEEET---T--HHHH-----HHHHHHTEEEEEEEEE-
T ss_pred HHHHHHHhcCCCeE-----EEEecCchHHHHHHHHHhcCCCCEEEEcC---CcHHHHH-----HHHHHcCCeEEEecCC-
Confidence 56678999999984 45677775 99999999999999999975 5666532 2456677644444322
Q ss_pred cCCCC---CCCH-----HHHHHHhhhcC-Ce---EE-EEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 232 DESTG---LVDY-----DMLEKTAILFR-PK---LI-IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 232 ~~~~~---~iD~-----d~le~~i~~~~-~k---lI-i~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
+++.+ .+++ +.|++.++++. .| ++ +++++.+|...|+++|+++|+++|++|++|+||...+.+....
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp 216 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLP 216 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGG
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCc
Confidence 32333 4677 89999887642 23 35 4455667999999999999999999999999999777665333
Q ss_pred cCCCC-CCc-------EEEEcCcCcCccC-cEEEEEEeCCC
Q 018300 299 ADPFK-YCD-------VVTTTTHKSLRGP-RGGMIFFKKDP 330 (358)
Q Consensus 299 ~~pl~-gaD-------iv~~S~hK~L~Gp-~GG~I~~~~~~ 330 (358)
.+.+. |+| +++.|+||+|++. ++++|..+.+.
T Consensus 217 ~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~ 257 (417)
T PF01276_consen 217 RSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDR 257 (417)
T ss_dssp TTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCC
T ss_pred cchhhccCccccccceeeeechhhcccccccceEEEecCCC
Confidence 35556 999 9999999999987 57899988874
No 117
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.69 E-value=9.3e-16 Score=151.21 Aligned_cols=197 Identities=25% Similarity=0.296 Sum_probs=147.0
Q ss_pred cccccCCCC----cHHHHHHHhhhhhcccCCCCCCCcCCCCcH-HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 106 ELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 106 ~lias~n~~----s~~V~~al~~~l~~~~~~G~pg~r~~~G~~-~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
....|++|. +|.++++....+. +|.-|.+++|...|+. ...++|+ .+++++|.+.+ +.++||..|
T Consensus 42 ~nf~SNdYLGLa~~~~~~~a~~~~~~-~~g~g~~gsR~i~G~~~~h~~LE~----~lA~f~g~e~a-----l~f~SGy~A 111 (388)
T COG0156 42 LNFCSNDYLGLASHPELIEAAKAAIR-RYGVGAGGSRLISGTSDLHVELEE----ELADFLGAEAA-----LLFSSGFVA 111 (388)
T ss_pred EeeeccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCcccCCcHHHHHHHH----HHHHHhCCCcE-----EEEcccchh
Confidence 334889986 8889999987765 4555777888666764 4445665 48999999973 778999999
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-----CCeEE
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLI 255 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-----~~klI 255 (358)
|..++.++.++||.|+...+.|-+- . ..+.+++. +.+.|. ..|+++||+++++. +.++|
T Consensus 112 N~~~i~~l~~~~dli~~D~lnHASi------i--dG~rls~a--~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~I 175 (388)
T COG0156 112 NLGLLSALLKKGDLIFSDELNHASI------I--DGIRLSRA--EVRRFK------HNDLDHLEALLEEARENGARRKLI 175 (388)
T ss_pred HHHHHHHhcCCCcEEEEechhhhhH------H--HHHHhCCC--cEEEec------CCCHHHHHHHHHhhhccCCCceEE
Confidence 9999999999999999987754431 1 23445555 334432 46889999998652 24677
Q ss_pred EEc--CCCCCCCCCHHHHHHHHHHcCCEEEEecccccccccc-CC--cc-CCCC--CCcEEEEcCcCcCccCcEEEEEEe
Q 018300 256 IAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA-DPFK--YCDVVTTTTHKSLRGPRGGMIFFK 327 (358)
Q Consensus 256 i~~--~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~--~~-~pl~--gaDiv~~S~hK~L~Gp~GG~I~~~ 327 (358)
+++ +|..|...|+++|++++++||++|++|.||+.|+.+. |. .. .-+. ..|++++|+.|.|+ --||++.++
T Consensus 176 vtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v~g~ 254 (388)
T COG0156 176 VTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYIAGS 254 (388)
T ss_pred EEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccCceeeCc
Confidence 765 3556778999999999999999999999999998863 21 10 1122 45899999999986 578999998
Q ss_pred CC
Q 018300 328 KD 329 (358)
Q Consensus 328 ~~ 329 (358)
..
T Consensus 255 ~~ 256 (388)
T COG0156 255 AA 256 (388)
T ss_pred HH
Confidence 74
No 118
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.69 E-value=8.8e-15 Score=144.53 Aligned_cols=198 Identities=17% Similarity=0.139 Sum_probs=132.4
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~p 191 (358)
.+++.+.+++.+.+.+....+|+. ..|.+ ++++.+++++.+.+|.+.. ..-+|.+++|+ +|+..++.++++|
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~~~~~~-~~~~vi~t~G~~~~l~~~~~~~~~~ 114 (383)
T TIGR03540 42 PTPKHIVEALCKAAENPENHRYPS---YEGML---AYRQAVADWYKRRFGVELD-PETEVLSLIGSKEGIAHIPLAFVNP 114 (383)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC---CCCCH---HHHHHHHHHHHHhhCCCCC-CCCeEEECCCcHHHHHHHHHHhCCC
Confidence 457889999887654332234443 23432 5666677777777776421 10146666664 6999999999999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC-
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD- 267 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d- 267 (358)
||+|++.++.|..+.. .....|. +++++++++++ ..+|++++++.+.. ++|+|++..++|| ...+
T Consensus 115 gd~vlv~~P~y~~~~~--------~~~~~G~--~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i~~P~NPtG~~~~~ 183 (383)
T TIGR03540 115 GDIVLVPDPGYPVYRI--------GTLFAGG--EPYEMPLKEENGFLPDFDAIPEDIAK-KAKLMFINYPNNPTGAVAPL 183 (383)
T ss_pred CCEEEEeCCCCcchHH--------HHHhcCC--EEEEEecCcccCCccCHHHHHhhccc-cceEEEEeCCCCCcCccCCH
Confidence 9999999987665422 2335565 44555566443 46899999988754 7898888766665 4555
Q ss_pred --HHHHHHHHHHcCCEEEEeccccccccccCC-ccC--CCCC---CcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 268 --YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFKY---CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 268 --l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~--pl~g---aDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+++|.++|+++|+++++|+++. .+.+.+. .++ .+++ -.+++.|++|+| +|.|-|+++.+++
T Consensus 184 ~~~~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~ 254 (383)
T TIGR03540 184 KFFKELVEFAKEYNIIVCHDNAYS-EITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNAD 254 (383)
T ss_pred HHHHHHHHHHHHcCEEEEEecchh-hhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHH
Confidence 6888999999999999999976 3333321 111 1222 237788999987 4677899998763
No 119
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.68 E-value=2.2e-15 Score=146.36 Aligned_cols=195 Identities=23% Similarity=0.234 Sum_probs=131.9
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~-~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.++.+++++...+. +|..++++.++..|. +..++ .++.++++++.+. .+++++|+.++..++.++++||
T Consensus 31 ~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~~~~~-----~i~~~~G~~~~~~~l~~~~~~g 100 (360)
T TIGR00858 31 SHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEE----LEEELAEWKGTEA-----ALLFSSGYLANVGVISALVGKG 100 (360)
T ss_pred CCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHH----HHHHHHHHhCCCC-----EEEECchHHHHHHHHHHhCCCC
Confidence 45899999987764 444454443333333 32233 4566888888643 4778899998888888889999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc---CCeEEEEcCCC--CCCCCC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLIIAGASA--YPRDFD 267 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~---~~klIi~~~s~--~~~~~d 267 (358)
|+|++.++.|.++.. .....|..+ ..++ .+|++++++.++.. ++++|+++... .|...|
T Consensus 101 d~v~~~~~~~~~~~~--------~~~~~g~~~--~~~~------~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~ 164 (360)
T TIGR00858 101 DLILSDALNHASLID--------GCRLSGARV--RRYR------HNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP 164 (360)
T ss_pred CEEEEEccccHHHHH--------HHHhcCCce--EEec------CCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC
Confidence 999998876554321 223445433 2221 36889999888653 46777776544 345789
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccccC-C--cc-CCCC--CCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHh
Q 018300 268 YPRMRQIADAVGALLMMDMAHISGLVAAS-V--VA-DPFK--YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~Ah~~Gl~~~g-~--~~-~pl~--gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+++|.++|+++|+++++|++|+.|..... . .+ ..++ +.|+++.|+||+|+ ++||++++++ ++.+++.
T Consensus 165 ~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~gG~~~~~~------~~~~~~~ 237 (360)
T TIGR00858 165 LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SYGAYVAGSQ------ALIDYLI 237 (360)
T ss_pred HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-ccCcEEEcCH------HHHHHHH
Confidence 99999999999999999999987644211 1 11 1122 67899999999875 5789988876 4555554
No 120
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.68 E-value=1e-15 Score=152.96 Aligned_cols=187 Identities=17% Similarity=0.171 Sum_probs=128.0
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhcccc
Q 018300 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (358)
Q Consensus 140 ~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (358)
|+|.+.+.+||+. ++++||.++ .|.++|||.|++.++...++|||+| +.. .|+... ...+..
T Consensus 74 Yagd~s~~~LE~~----vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n---~~f~Tt----~ahI~~ 135 (460)
T PRK13237 74 YAGSRNFYHLEET----VQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGN---MYFTTT----RYHQEL 135 (460)
T ss_pred hcCCCcHHHHHHH----HHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCc---cchHhh----HHHHHh
Confidence 4556666778775 678999987 3677899999998766568999976 221 222211 011334
Q ss_pred CCceEEEEece---------ecCCCCCCCHHHHHHHhhhcCC------eEEEEcCCCCCCCC---CHHHHHHHHHHcCCE
Q 018300 220 TSIYFESMPYR---------LDESTGLVDYDMLEKTAILFRP------KLIIAGASAYPRDF---DYPRMRQIADAVGAL 281 (358)
Q Consensus 220 ~g~~~~~~~~~---------~~~~~~~iD~d~le~~i~~~~~------klIi~~~s~~~~~~---dl~~I~~ia~e~g~~ 281 (358)
.|.. ++.+. .++.++.+|+++|++.+++..+ ++++......|..+ ++++|.++|+++|++
T Consensus 136 ~Ga~--fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~ 213 (460)
T PRK13237 136 NGGI--FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIK 213 (460)
T ss_pred CCcE--EEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCE
Confidence 4542 22211 1355789999999999875322 22332222224544 789999999999999
Q ss_pred EEEecccccc---ccc---cCCccCC--------CCCCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhhc--cC
Q 018300 282 LMMDMAHISG---LVA---ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA--VF 345 (358)
Q Consensus 282 livD~Ah~~G---l~~---~g~~~~p--------l~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~--~f 345 (358)
|+.|+||++| ++- .+....+ +.++|.+++|+||.+.++.||+|+++++ ++.++++.. .|
T Consensus 214 Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~-----eL~~~~r~~~~~~ 288 (460)
T PRK13237 214 VFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE-----ELFDEAKELVVVY 288 (460)
T ss_pred EEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH-----HHHHHHHHhcccc
Confidence 9999999998 330 1111122 2379999999999999999999999998 899999887 66
Q ss_pred Cccccc
Q 018300 346 PGLQVG 351 (358)
Q Consensus 346 ~g~q~~ 351 (358)
+|+..-
T Consensus 289 eG~~ty 294 (460)
T PRK13237 289 EGMPSY 294 (460)
T ss_pred CCCcCC
Confidence 776543
No 121
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.68 E-value=6.4e-15 Score=146.13 Aligned_cols=230 Identities=13% Similarity=0.092 Sum_probs=148.4
Q ss_pred cccccccChHHHHHHHHHHHHhhhcccccccC--CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQFKSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~--n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
++++....+.++.++.....+....++|-.++ ..+++.+.+++...+.+....+|+. ..|.. ++.+.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~G~~---~lr~~~~~~l 78 (389)
T PRK05957 5 TSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA---VQGIP---PLLEAITQKL 78 (389)
T ss_pred hHHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCCH---HHHHHHHHHH
Confidence 34555556666655554444333335554333 3478889999887664332222322 23333 4556677788
Q ss_pred HHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC
Q 018300 158 LAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (358)
Q Consensus 158 a~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (358)
++.+|.+.+.. .+|.+++|+ .|+..++.++++|||+|+++++.|..+.. .....|. +++.++.+ +++
T Consensus 79 ~~~~g~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~ 146 (389)
T PRK05957 79 QQDNGIELNNE-QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGC--QPILVPTD-DNY 146 (389)
T ss_pred HHHhCCCCCCC-CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCC--EEEEeecC-CCC
Confidence 88889742101 246666665 58888888889999999999886655432 2234565 44455555 345
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCC-ccCC--C-C--CC
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--F-K--YC 305 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~p--l-~--ga 305 (358)
.+|++++++.++. ++|+|++..++|| ...+ +++|+++|+++|+++++|+++. .+.+.+. ...+ + + .-
T Consensus 147 ~~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~ 224 (389)
T PRK05957 147 QLQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYE-YFTYDGVKHFSPGSIPGSGNH 224 (389)
T ss_pred CcCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccch-hccCCCCCccChhhCCCccCc
Confidence 7999999998864 7898887666654 4555 8889999999999999999976 4443321 1111 1 2 12
Q ss_pred cEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 306 DVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 306 Div~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
-+++.|++|.+ +|.|-|+++++++
T Consensus 225 ~i~~~S~SK~~g~~GlRiG~~~~~~~ 250 (389)
T PRK05957 225 TISLYSLSKAYGFASWRIGYMVIPIH 250 (389)
T ss_pred EEEEecchhhccCccceeEEEecCHH
Confidence 37789999997 5667899998763
No 122
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.68 E-value=4e-15 Score=146.46 Aligned_cols=204 Identities=15% Similarity=0.076 Sum_probs=135.0
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeC-CC
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPL-SG 177 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~~-SG 177 (358)
..++|-..++ .+++.+++++...+.+.. .+|+. ..|.+ ++++.+.+++.+.+| ++++ +|.++ ++
T Consensus 25 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~la~~~~~~~~~~~~~~----~i~~t~g~ 93 (382)
T PRK06108 25 GVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTH---NLGIP---ELREALARYVSRLHGVATPPE----RIAVTSSG 93 (382)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCCH---HHHHHHHHHHHHHhCCCcCcc----eEEEeCCh
Confidence 3455554443 458889999887665421 22332 12333 566777777888888 5543 34444 55
Q ss_pred HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC--CCCCCCHHHHHHHhhhcCCeEE
Q 018300 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLI 255 (358)
Q Consensus 178 t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~iD~d~le~~i~~~~~klI 255 (358)
++|+..++.++++|||+|++.++.|..+.. .+...|..+ ++++.+. .++.+|++++++.+.. ++++|
T Consensus 94 ~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~--~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~i 162 (382)
T PRK06108 94 VQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGARV--VCVPLDFGGGGWTLDLDRLLAAITP-RTRAL 162 (382)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCCEE--EEeeCCCCCCCccCCHHHHHHhcCc-cceEE
Confidence 679999999999999999999887654421 234456544 4444542 2346999999998754 68888
Q ss_pred EEcCCCCCC--CC---CHHHHHHHHHHcCCEEEEecccccccccc-C-CccCCCC-----CCcEEEEcCcCcC--ccCcE
Q 018300 256 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-S-VVADPFK-----YCDVVTTTTHKSL--RGPRG 321 (358)
Q Consensus 256 i~~~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g-~~~~pl~-----gaDiv~~S~hK~L--~Gp~G 321 (358)
++..+++|+ .. ++++|.++|+++|+++++|++|.. +... + ..+..++ ...+++.|++|++ +|.|-
T Consensus 163 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~Ri 241 (382)
T PRK06108 163 FINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYER-LYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRL 241 (382)
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhh-hccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccce
Confidence 776666553 44 478899999999999999999773 3332 1 1221111 2347889999986 56778
Q ss_pred EEEEEeCC
Q 018300 322 GMIFFKKD 329 (358)
Q Consensus 322 G~I~~~~~ 329 (358)
|+++++++
T Consensus 242 G~~~~~~~ 249 (382)
T PRK06108 242 GWLVAPPA 249 (382)
T ss_pred eeeeCCHH
Confidence 99999763
No 123
>PRK07550 hypothetical protein; Provisional
Probab=99.68 E-value=9.3e-15 Score=144.60 Aligned_cols=197 Identities=16% Similarity=0.069 Sum_probs=130.5
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~p 191 (358)
.+++.+.+++.+.+.+.....|+. ..|.+ ++++.+.+++.+.+|.... . -+|++++| ++|+..++.++++|
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~g~~~~-~-~~i~~t~G~~~al~~~~~~l~~~ 113 (386)
T PRK07550 42 PPPPELLRALAEAAADPAAHLYGP---VEGLP---ELREAYAAHYSRLYGAAIS-P-EQVHITSGCNQAFWAAMVTLAGA 113 (386)
T ss_pred CCCHHHHHHHHHHHhCcCCcCCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-c-ceEEEecCcHHHHHHHHHHhcCC
Confidence 347788888877654322122321 22443 6777777778777775431 1 24666766 56999999999999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCC-
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD- 267 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~d- 267 (358)
||+|++.++.+.++.. .+...|. ++++++.+++ +..+|.+++++.++. ++++|++..+++|+ ..+
T Consensus 114 gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~~~~P~NPtG~~~~~ 182 (386)
T PRK07550 114 GDEVILPLPWYFNHKM--------WLDMLGI--RPVYLPCDEGPGLLPDPAAAEALITP-RTRAIALVTPNNPTGVVYPP 182 (386)
T ss_pred CCEEEEcCCCCcchHH--------HHHhcCC--EEEEEecCCCcCCCCCHHHHHHHhcc-cCcEEEEeCCCCCCCcccCH
Confidence 9999999887655422 2234555 5556666643 446899999998865 67877665556553 444
Q ss_pred --HHHHHHHHHHcCCEEEEeccccccccccCCcc-CCCC----CC-cEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 268 --YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK----YC-DVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 268 --l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~-~pl~----ga-Div~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+++|.++|+++|+++++|+++. ++...+..+ ..+. +. .+++.|++|++ +|.|.|+++++++
T Consensus 183 ~~~~~i~~~~~~~~~~iI~Dd~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~ 253 (386)
T PRK07550 183 ELLHELYDLARRHGIALILDETYR-DFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPA 253 (386)
T ss_pred HHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHH
Confidence 7899999999999999999975 333222111 1111 11 36689999997 4778999999764
No 124
>PLN02721 threonine aldolase
Probab=99.68 E-value=1.9e-15 Score=146.76 Aligned_cols=192 Identities=18% Similarity=0.136 Sum_probs=125.3
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc-C
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-P 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~-p 191 (358)
++++.+++++...... . ...|| + +..+++|+ .+++++|.+. .+.+++|+.++..++.++.+ |
T Consensus 17 ~~~~~~~~a~~~~~~~-----~-~~~~~-~-~~~~~l~~----~la~~~~~~~-----~~~~~~Gs~a~~~~l~~~~~~~ 79 (353)
T PLN02721 17 KPTDAMRAAMANAEVD-----D-DVLGY-D-PTALRLEE----EMAKIFGKEA-----ALFVPSGTMGNLISVLVHCDVR 79 (353)
T ss_pred CCCHHHHHHHHhccCC-----C-cccCC-C-HHHHHHHH----HHHHHhCCce-----eEEecCccHHHHHHHHHHccCC
Confidence 5688888888642011 1 11122 2 22445554 5788999875 25667899998888888877 9
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh------cCCeEEEEcC-CCC--
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLIIAGA-SAY-- 262 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~------~~~klIi~~~-s~~-- 262 (358)
||+|++.++.|-+....+ ......|. ++..++.+ +++.+|+|++++.++. .++|+|++.. +++
T Consensus 80 gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~ 151 (353)
T PLN02721 80 GSEVILGDNSHIHLYENG-----GISTLGGV--HPRTVKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCG 151 (353)
T ss_pred CCeEEEcCccceehhccc-----chhhhcCc--eeEecCCC-cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccC
Confidence 999999887542111000 01234454 44445555 3567999999998863 2678888744 344
Q ss_pred CCCCC---HHHHHHHHHHcCCEEEEeccccccccc-cCCccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 263 PRDFD---YPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 263 ~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~-~g~~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
|...| +++|.++|+++|+++++|++|..+... .+..+..+. ++|.++.|+||+|++|.|++++.+++
T Consensus 152 G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~ 223 (353)
T PLN02721 152 GRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKS 223 (353)
T ss_pred CccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHH
Confidence 34455 789999999999999999998755321 122112222 78999999999999887776666653
No 125
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.67 E-value=5.3e-15 Score=145.03 Aligned_cols=196 Identities=17% Similarity=0.137 Sum_probs=126.8
Q ss_pred CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc-
Q 018300 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL- 189 (358)
Q Consensus 111 ~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all- 189 (358)
...+.+.+++++...+... .|.++ .+.+.. ++++.+++++++++|+++++ .+.+.+|+.++..++.++.
T Consensus 29 ~~~~~~~~~~a~~~~~~~~--~~~~~--~~~~~~---~~~~~~~~~la~~~g~~~~~---~~~~~g~~~~~~~~~~~~~~ 98 (373)
T TIGR03812 29 CTNPHPIAVKAYDMFIETN--LGDPG--LFPGTK---KIEEEVVGSLGNLLHLPDAY---GYIVSGGTEANIQAVRAAKN 98 (373)
T ss_pred eCCchHHHHHHHHHHhhcC--CCCcc--cCccHH---HHHHHHHHHHHHHhCCCCCC---eEEeccHHHHHHHHHHHHHH
Confidence 3346666788876654332 34443 234432 45566888999999998642 3556677788888776653
Q ss_pred -----cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCC-eEEEEcCC-CC
Q 018300 190 -----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP-KLIIAGAS-AY 262 (358)
Q Consensus 190 -----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~-klIi~~~s-~~ 262 (358)
++||+|+++++.|.+ +. +.+...|..+. .++++ +++.+|++++++.+++ ++ +++++.++ .+
T Consensus 99 ~~~~~~~g~~vl~~~~~h~~---~~-----~~~~~~G~~~~--~v~~~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~t 166 (373)
T TIGR03812 99 LAREEKRTPNIIVPESAHFS---FE-----KAAEMLGLELR--YAPLD-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTEL 166 (373)
T ss_pred HHhccCCCcEEEECCcchHH---HH-----HHHHHcCCeEE--EEeeC-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCC
Confidence 478999998764433 21 12345566444 44455 3578999999998865 44 45555432 35
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEeccccccccc---cCC--ccCCCC--CCcEEEEcCcCcCccC-cEE-EEEEeC
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVA---ASV--VADPFK--YCDVVTTTTHKSLRGP-RGG-MIFFKK 328 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~---~g~--~~~pl~--gaDiv~~S~hK~L~Gp-~GG-~I~~~~ 328 (358)
|...|+++|.++|+++|+++++|+||+.+... .+. ....+. ++|.+++|+||++.+| ++| +++.++
T Consensus 167 G~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~ 241 (373)
T TIGR03812 167 GQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK 241 (373)
T ss_pred CccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH
Confidence 77889999999999999999999999855321 111 111222 7899999999986554 334 444444
No 126
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.67 E-value=3.2e-15 Score=146.75 Aligned_cols=196 Identities=21% Similarity=0.225 Sum_probs=130.2
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD 193 (358)
.+|.|++++...+.. |..+++..++..|.. .+.+..++++++++|.+. .+.+++|+.++..++.++++|||
T Consensus 54 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~---~~~~~l~~~la~~~~~~~-----~i~~~~g~~~~~~~l~~~~~~gd 124 (385)
T PRK05958 54 RHPRLIAAAQQAARR-YGAGSGGSRLVTGNS---PAHEALEEELAEWFGAER-----ALLFSSGYAANLAVLTALAGKGD 124 (385)
T ss_pred CCHHHHHHHHHHHHh-cCCCCCCcCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECcHHHHHHHHHHHhCCCCC
Confidence 578999999887753 433333333333322 223335667888998532 46778899988888888899999
Q ss_pred EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcCCC--CCCCCCHH
Q 018300 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASA--YPRDFDYP 269 (358)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~s~--~~~~~dl~ 269 (358)
+|++.++.|+++.. .....|..+. .++ ..|++++++.++.. ++.+++++... .|...+++
T Consensus 125 ~V~~~~~~~~~~~~--------~~~~~g~~~~--~~~------~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~ 188 (385)
T PRK05958 125 LIVSDKLNHASLID--------GARLSRARVR--RYP------HNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLA 188 (385)
T ss_pred EEEEeCccCHHHHH--------HHHhcCCceE--EeC------CCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHH
Confidence 99998877665432 2234454333 322 24889999988653 34566665443 45578999
Q ss_pred HHHHHHHHcCCEEEEeccccccccc-cCC-ccC--CCC-C-CcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHh
Q 018300 270 RMRQIADAVGALLMMDMAHISGLVA-ASV-VAD--PFK-Y-CDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 270 ~I~~ia~e~g~~livD~Ah~~Gl~~-~g~-~~~--pl~-g-aDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+|.++|+++|+++++|++|+.|... .+. ... .++ . .++++.|+||+| |+.||+++.++ ++.+.+.
T Consensus 189 ~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~~------~~~~~~~ 259 (385)
T PRK05958 189 ELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGSE------TLIDYLI 259 (385)
T ss_pred HHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcCH------HHHHHHH
Confidence 9999999999999999999877543 121 111 233 2 348889999998 56788888775 4555554
No 127
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.67 E-value=7.3e-16 Score=154.62 Aligned_cols=157 Identities=21% Similarity=0.149 Sum_probs=115.5
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc
Q 018300 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (358)
Q Consensus 134 ~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (358)
+.++|+ +++..+++|+ ++++++|.+. .+.++||+.|+..++.+++++||+|+++++.|++......
T Consensus 49 ~~ysr~--~~p~~~~le~----~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~--- 114 (418)
T TIGR01326 49 NIYSRL--MNPTTDVLEQ----RIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFK--- 114 (418)
T ss_pred ceeECC--CChhHHHHHH----HHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHH---
Confidence 334444 4455555554 5889999865 4778899999999999999999999999877766432110
Q ss_pred hhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
..+...|. ++..++. .|++++++.+.. ++++|+++.+++| ...|+++|.++|+++|+++++|++|+.+
T Consensus 115 -~~~~~~G~--~v~~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~ 184 (418)
T TIGR01326 115 -HTLKRLGI--EVRFVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATP 184 (418)
T ss_pred -HHHHHcCc--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchh
Confidence 11233454 4444332 288999998864 7899988766665 5789999999999999999999998765
Q ss_pred ccccCCccCCCC-CCcEEEEcCcCcCccC
Q 018300 292 LVAASVVADPFK-YCDVVTTTTHKSLRGP 319 (358)
Q Consensus 292 l~~~g~~~~pl~-gaDiv~~S~hK~L~Gp 319 (358)
.. ..+++ ++|++++|++|+++|+
T Consensus 185 ~~-----~~~l~~g~Divv~S~sK~l~g~ 208 (418)
T TIGR01326 185 YL-----CRPIDHGADIVVHSATKYIGGH 208 (418)
T ss_pred hc-----CCchhcCCeEEEECccccccCC
Confidence 32 34566 8999999999999764
No 128
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.67 E-value=1.1e-14 Score=144.62 Aligned_cols=197 Identities=15% Similarity=0.193 Sum_probs=129.2
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHhccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~pG 192 (358)
.++.+++++...+.+....+|+. ..|.+ ++++.+.+++.+.+|.+-+ ..-.+++++| ++|+..++.++++||
T Consensus 49 ~p~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~~~~~~-~~~~i~vt~G~~~al~~~~~~~~~~g 121 (394)
T PRK05942 49 APQPVIEAAIAALADPQNHGYPP---FEGTA---SFRQAITDWYHRRYGVELD-PDSEALPLLGSKEGLTHLALAYVNPG 121 (394)
T ss_pred CCHHHHHHHHHHHhCCCCccCCC---CCCCH---HHHHHHHHHHHHHHCCCcC-CCCeEEEccChHHHHHHHHHHhCCCC
Confidence 46667777766554322233443 12333 5666666777766675321 1013555665 569999999999999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC--
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD-- 267 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d-- 267 (358)
|+|++++|.|.++.. .+...|. +++++++++++ ..+|++++++.+.. ++|+|++..+++| ...+
T Consensus 122 d~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~ 190 (394)
T PRK05942 122 DVVLVPSPAYPAHFR--------GPLIAGA--QIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPRE 190 (394)
T ss_pred CEEEEcCCCCcchHH--------HHHHcCC--EEEEeecCCccCCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHH
Confidence 999999988766532 1234555 45555566433 46999999988754 7899988766655 4555
Q ss_pred -HHHHHHHHHHcCCEEEEeccccccccccCCccCC---CC---CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 268 -YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 268 -l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p---l~---gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+++|.++|+++|+++++|+++. .+...+..+.+ ++ ...+++.|++|.+ +|.|.|+++++++
T Consensus 191 ~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~ 260 (394)
T PRK05942 191 FFEEIVAFARKYEIMLVHDLCYA-ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRH 260 (394)
T ss_pred HHHHHHHHHHHcCeEEEEeccch-hhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHH
Confidence 7788999999999999999976 33322221111 22 2347789999976 5667899998763
No 129
>PRK06460 hypothetical protein; Provisional
Probab=99.67 E-value=1.4e-15 Score=150.49 Aligned_cols=168 Identities=18% Similarity=0.208 Sum_probs=117.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++..+++|+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.+++.+.... ..+...|
T Consensus 43 ~~p~~~~L~~----~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~----~~~~~~G 109 (376)
T PRK06460 43 ANPTVLELTK----KIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFT----DYLKNWG 109 (376)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHH----HHHHhhC
Confidence 3444555554 5889999976 3567899999999999999999999998765554322110 1223446
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
..+ ..++.+ |.+.+++.+. .++|+|++..+++| ..+|+++|.++|+++|+++++|++|+.+.. .
T Consensus 110 ~~v--~~~~~~------~~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-----~ 175 (376)
T PRK06460 110 VNV--DASNPG------SDNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-----Q 175 (376)
T ss_pred cEE--EEECCC------CHHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence 543 333332 2244555433 47899988777664 589999999999999999999999875421 1
Q ss_pred CCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.+++ ++|+++.|+||+++|++ +|++++++ ++.+++..
T Consensus 176 ~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~------~l~~~l~~ 216 (376)
T PRK06460 176 KPLELGADIVVHSASKFLAGHNDVIAGLAAGYG------KLLNVIDQ 216 (376)
T ss_pred ChhhcCCCEEEeecceeccCCCCceEEEEecCH------HHHHHHHH
Confidence 3444 78999999999998875 79888776 45555543
No 130
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.67 E-value=7.3e-15 Score=145.46 Aligned_cols=228 Identities=18% Similarity=0.185 Sum_probs=145.5
Q ss_pred ccccccChHHHHHHHHHHHHh----hhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQ----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~----~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~ 154 (358)
+++....+.++..+.+..... ..-++|-..++ .+++.+.+++...+......+|+. ..|.+ ++++.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia 78 (388)
T PRK07366 5 QRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLL---FHGTL---DFREAAA 78 (388)
T ss_pred hhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCC---CCCCH---HHHHHHH
Confidence 344455555555444433321 23355544443 458889999887654332223432 12333 5666666
Q ss_pred HHHHHHcCC--CCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 155 KRALAAFNL--DENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 155 ~~la~lfg~--~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
+++.+.+|. +++ -+|++++|+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +++++++
T Consensus 79 ~~~~~~~g~~~~~~---~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~ 145 (388)
T PRK07366 79 QWYEQRFGLAVDPE---TEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAG--------GVYLAGG--QIYPMPL 145 (388)
T ss_pred HHHHHhhCCcCCCc---CeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEEC
Confidence 667666664 332 147777776 49999999999999999999987766532 2345565 4455556
Q ss_pred cCCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCC--ccCCC-
Q 018300 232 DEST-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPF- 302 (358)
Q Consensus 232 ~~~~-~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~--~~~pl- 302 (358)
++++ ..+|++++++.+.. ++|+|++..++||+ ..+ +++|.++|+++|++|++|+++. .+.+.+. .++..
T Consensus 146 ~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~ 223 (388)
T PRK07366 146 RAENDFLPVFADIPTEVLA-QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYV-DLVFDGEVEPPSILQ 223 (388)
T ss_pred CCccCCCCCHHHHHHhhcc-cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchh-hcccCCCCCCCChhh
Confidence 6443 46899999876643 68988887777764 444 6678889999999999999865 4443332 12211
Q ss_pred -C-CCc--EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 303 -K-YCD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 303 -~-gaD--iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+ ..+ +++.|++|++ +|.|.|+++++++
T Consensus 224 ~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~ 256 (388)
T PRK07366 224 ADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQ 256 (388)
T ss_pred CCCCcccEEEEeecccccCCcchhheehcCCHH
Confidence 2 112 6788999997 6888999998764
No 131
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.67 E-value=1.4e-14 Score=144.19 Aligned_cols=229 Identities=16% Similarity=0.108 Sum_probs=144.9
Q ss_pred ccccccChHHHHHHHHHHHHh----hhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQ----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~----~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~ 154 (358)
+++....+..+..+.....+. ...+++-..++ .+++.+.+++...+......+|+. .|.. ++++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~----~G~~---~lr~aia 79 (399)
T PRK07681 7 TRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTL----SGIQ---EFHEAVT 79 (399)
T ss_pred HHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCC----CCcH---HHHHHHH
Confidence 344444455554444443322 23355543333 367888998887654322223321 2433 5666666
Q ss_pred HHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC
Q 018300 155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (358)
Q Consensus 155 ~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (358)
+++.+.+|.+-+ +..+|++++|+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++++++++
T Consensus 80 ~~~~~~~g~~~~-~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~--~~~~v~~~~ 148 (399)
T PRK07681 80 EYYNNTHNVILN-ADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYET--------GIQMAGA--TSYYMPLKK 148 (399)
T ss_pred HHHHHHhCCCCC-CCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhcCC--EEEEEecCC
Confidence 666666665321 10146667766 48999999999999999999987765432 2345565 555666765
Q ss_pred CC-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCC---CCC
Q 018300 234 ST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FKY 304 (358)
Q Consensus 234 ~~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p---l~g 304 (358)
++ ..+|++++++.+.. ++|+|++..+++| ...+ +++|.++|+++|++|++|+++. .+.+.+..+.+ +++
T Consensus 149 ~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~ 226 (399)
T PRK07681 149 ENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYA-EFYFDGNKPISFLSVPG 226 (399)
T ss_pred CCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccch-hheeCCCCCCChhhCCC
Confidence 43 36899999887753 7899888766665 4555 7788899999999999999976 44433321111 121
Q ss_pred ---CcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 305 ---CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 305 ---aDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
-.+++.|++|.+ +|.|.|+++.+++
T Consensus 227 ~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~ 256 (399)
T PRK07681 227 AKEVGVEINSLSKSYSLAGSRIGYMIGNEE 256 (399)
T ss_pred CcccEEEEeecccccCCccceeEEEecCHH
Confidence 247788999987 5778899998763
No 132
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.67 E-value=4.5e-16 Score=154.05 Aligned_cols=192 Identities=14% Similarity=0.054 Sum_probs=130.0
Q ss_pred hcccccccCCCCcHH-HHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCCHHH
Q 018300 103 KSLELIASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPA 180 (358)
Q Consensus 103 ~~i~lias~n~~s~~-V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~-~SGt~A 180 (358)
..+.+.++...+++. |++++...+.. .. ..+.++.+.+++ +++.++++||++.. . ..+++ .|||.+
T Consensus 12 ~~~~f~~Gp~~~~~~~v~~a~~~~~~~------~~---hr~~~f~~~~~~-~r~~l~~l~~~~~~-~-~v~~~~gs~T~~ 79 (378)
T PRK03080 12 ADPRFSSGPCKKRPGWQLEALADALLG------RS---HRQKPVKALLKR-VIEGTRELLSLPEG-Y-EVGIVPGSDTGA 79 (378)
T ss_pred CCCCcCCCCcCCChHHHHHHHHhhhcc------cC---cCCHHHHHHHHH-HHHHHHHHhCCCCC-c-eEEEECCchHHH
Confidence 456788888888888 99999854321 11 123466666665 89999999998532 1 12334 488999
Q ss_pred HHHHHHHhccC-CCEEEecCCCCCcccccccccchhccccCCc-eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 181 NFEVYTAILKP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 181 ~~~a~~all~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
+.+++.+++++ ++.|+. +.+|+.. +.. ...+..|. .++.+. .+ +++.+|+++++. +|+|.+.
T Consensus 80 ~~~~~~~l~~~~~~~vi~-~g~f~~~----~~~--~~~~~~g~~~v~~~~--~~-~g~~~d~~~i~~------~~~V~~~ 143 (378)
T PRK03080 80 WEMALWSLLGARRVDHLA-WESFGSK----WAT--DVVKQLKLEDPRVLE--AD-YGSLPDLSAVDF------DRDVVFT 143 (378)
T ss_pred HHHHHHhcCCCCcceEEE-eCHHHHH----HHH--HHHhhcCCCCceEec--cC-CCCCCCHhhcCC------CCCEEEE
Confidence 99999999875 555554 4444432 110 01123354 444444 33 345788776432 3445543
Q ss_pred C--CCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 259 A--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 259 ~--s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+ +.+|...|+++|++ +++|+++++|++|++|.. |..++.+|++++|+||||.||.| |+++.+++
T Consensus 144 h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~-----pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~ 210 (378)
T PRK03080 144 WNGTTTGVRVPVARWIG--ADREGLTICDATSAAFAL-----PLDWSKLDVYTFSWQKVLGGEGGHGMAILSPR 210 (378)
T ss_pred ecCCccceeccchhhcc--ccCCCeEEEecccccccC-----CCCHHHCcEEEEehhhhCCCCCceEEEEECHH
Confidence 3 34688999999999 889999999999998865 22333789999999999999998 88888873
No 133
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.66 E-value=1.2e-15 Score=149.27 Aligned_cols=175 Identities=21% Similarity=0.204 Sum_probs=130.4
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccc
Q 018300 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (358)
Q Consensus 134 ~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (358)
|-++|+ |++..+.+|.. ++++.|+.. .+.+.||+.|+..++..++++||+|+..+..|+|.... ..
T Consensus 69 ~~Ysr~--~nPt~~~le~~----iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~--l~- 134 (409)
T KOG0053|consen 69 YDYSRS--GNPTRDVLESG----IAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRI--LR- 134 (409)
T ss_pred cccccC--CCCchHHHHHH----HHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHH--HH-
Confidence 445454 56777777764 788999987 36789999999999999999999999998888885331 11
Q ss_pred hhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
+.....|. +...++ .-|++++++.+++ ++++|+++.+.+|. ..|+++|+++||++|+++++|++-+
T Consensus 135 -~~~~~~gi--e~~~vd------~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~-- 202 (409)
T KOG0053|consen 135 -KFLPKFGG--EGDFVD------VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFG-- 202 (409)
T ss_pred -HHHHHhCc--eeeeec------hhhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcC--
Confidence 11122333 222322 2256677777765 78999999888874 7899999999999999999999833
Q ss_pred ccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 292 l~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.+....|+. |||||+.|..|++.|.. ||.++.+.+ ++.+++..
T Consensus 203 ---~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~-----~~~~~l~~ 249 (409)
T KOG0053|consen 203 ---SPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE-----ELASRLKF 249 (409)
T ss_pred ---cccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH-----HHHHHHHH
Confidence 333456777 89999999999999975 688888754 66666654
No 134
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.66 E-value=5.3e-15 Score=145.78 Aligned_cols=197 Identities=22% Similarity=0.225 Sum_probs=133.2
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD 193 (358)
.++.+++++...+. ++...+...++..|.. ++.+.+++++++++|.+. .+.++||++++..++.++++|||
T Consensus 48 ~~~~~~~a~~~~~~-~~~~~~~~~~~~~g~~---~l~~~l~~~l~~~~g~~~-----~i~~~sG~~a~~~a~~~~~~~gd 118 (385)
T TIGR01825 48 DHPRLKEAAAQAIQ-QYGVGAGAVRTIAGTL---RLHEELEEKLAKFKKTEA-----ALVFQSGFNTNQGVLSALLRKGD 118 (385)
T ss_pred CCHHHHHHHHHHHH-HcCCCCCccCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECcHHHHHHHHHHHhCCCCC
Confidence 68888888877654 2322222222334443 344556778899999754 47788999999999999999999
Q ss_pred EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc---CCeEEEEcCCC--CCCCCCH
Q 018300 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLIIAGASA--YPRDFDY 268 (358)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~---~~klIi~~~s~--~~~~~dl 268 (358)
+|++.++.|+++.. .+...+.. ...+ ..+|++++++.+... ++++|+++... .|...|+
T Consensus 119 ~vi~~~~~~~~~~~--------~~~~~g~~--~~~~------~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~ 182 (385)
T TIGR01825 119 IVLSDELNHASIID--------GLRLTKAT--KKIY------KHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPL 182 (385)
T ss_pred EEEEEccccHHHHH--------HHHhcCCc--eEEe------CCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCH
Confidence 99988876655421 22334432 2221 157888888876542 56788776533 4567899
Q ss_pred HHHHHHHHHcCCEEEEecccccccccc-CC--c-cCCCC-CCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 269 PRMRQIADAVGALLMMDMAHISGLVAA-SV--V-ADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 269 ~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~--~-~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
++|.++|+++|+++++|++|..|.... +. . ...++ ..|+++.|+||+|+ ..||+++.++ ++.+.+..
T Consensus 183 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~~~~~~------~~~~~~~~ 254 (385)
T TIGR01825 183 PEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIG-VVGGYAAGHK------ELIEYLKN 254 (385)
T ss_pred HHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhh-cCCCEEecCH------HHHHHHHH
Confidence 999999999999999999997664421 11 0 01233 67899999999984 5678888766 45555543
No 135
>PRK08960 hypothetical protein; Provisional
Probab=99.66 E-value=2e-14 Score=142.44 Aligned_cols=227 Identities=14% Similarity=0.062 Sum_probs=143.8
Q ss_pred cccccccChHHHHHHHHHHHHh----hhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQ----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~----~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~ 153 (358)
+.+++.+.+..+..+.+...+. ...++|-.+++ .+++.+++++.+.+.+.. .+|+. ..|.+ ++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~---~~g~~---~lr~~i 78 (387)
T PRK08960 6 SRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTA---ARGLP---ALREAI 78 (387)
T ss_pred hhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCC---CCCCH---HHHHHH
Confidence 4455566666655554443322 23355543333 468899999988776321 12322 12332 566655
Q ss_pred HHHHHHHcCC--CCCCCcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 154 QKRALAAFNL--DENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 154 ~~~la~lfg~--~~~~~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
.+++.+.+|. +++ +|.+++| ++|+..++.++++|||+|+++++.|.++.. .+...|..+. .++
T Consensus 79 a~~~~~~~g~~~~~~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~--~v~ 144 (387)
T PRK08960 79 AGFYAQRYGVDVDPE----RILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH--------FLRLVEGAAQ--LVP 144 (387)
T ss_pred HHHHHHHhCCCCChh----hEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCCeEE--EEe
Confidence 6666655554 443 4555655 569999999999999999999987766532 2234465444 444
Q ss_pred ecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-
Q 018300 231 LDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK- 303 (358)
Q Consensus 231 ~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~- 303 (358)
++++ +..+|++++++.+++ +++++++..+++| ...+ +++|+++|+++|+++++|+++. ++...+..+..+.
T Consensus 145 ~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~-~~~~~~~~~~~~~~ 222 (387)
T PRK08960 145 VGPDSRYQLTPALVERHWNA-DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYH-GLTYGVDAASVLEV 222 (387)
T ss_pred cCcccCCCCCHHHHHHHhCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhc
Confidence 5543 347999999998764 5676666555554 4555 5667778999999999999965 4443332222222
Q ss_pred CCc-EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 304 YCD-VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 304 gaD-iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
..+ +++.|++|.+ +|.|.|+++++++
T Consensus 223 ~~~vi~~~S~SK~~g~~GlRiG~~~~~~~ 251 (387)
T PRK08960 223 DDDAFVLNSFSKYFGMTGWRLGWLVAPPA 251 (387)
T ss_pred cCCEEEEeecccccCCcccEEEEEEcCHH
Confidence 223 6789999987 6778899999874
No 136
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.66 E-value=2e-14 Score=143.91 Aligned_cols=227 Identities=16% Similarity=0.070 Sum_probs=148.8
Q ss_pred ccccChHHHHHHHHHHHHhh------hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHH
Q 018300 83 LGEADPEVCEIITKEKERQF------KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (358)
Q Consensus 83 l~~~d~~~~~~i~~e~~~~~------~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~ 154 (358)
++...++.+..+...+++.. .-++|-..++ .+++.+.+++...+......+||. .|.. ++++.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G~~---~lr~aia 91 (410)
T PRK06290 19 GKETVIYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NGIQ---EFKEAAA 91 (410)
T ss_pred cccCchhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CCcH---HHHHHHH
Confidence 34555666666665555432 2344543333 367888888876553222223442 2333 5666677
Q ss_pred HHHHHHcCCC-CCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 155 KRALAAFNLD-ENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 155 ~~la~lfg~~-~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
+++.+.+|.+ -+ ..-+|.+++|+. |+..++.+++++||+|++++|.|.++.. .+...|. ++++++++
T Consensus 92 ~~~~~~~g~~~~~-~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~ 160 (410)
T PRK06290 92 RYMEKVFGVKDID-PVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGT--------HTKYYGG--EVYNLPLL 160 (410)
T ss_pred HHHHHHcCCCcCC-CcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHH--------HHHHcCC--EEEEEecC
Confidence 7777667754 21 101477888875 8889999999999999999987665432 2234565 55566666
Q ss_pred CCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCC--CC-
Q 018300 233 EST-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK- 303 (358)
Q Consensus 233 ~~~-~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p--l~- 303 (358)
+++ ..+|++++++.+.. ++|+|++..++||+ ..+ +++|.++|+++|++|++|+++. .+.+.+..++. +.
T Consensus 161 ~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~-~~~~~~~~~s~~~~~~ 238 (410)
T PRK06290 161 EENNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA-ALTFDGKPLSFLSVPG 238 (410)
T ss_pred CCcCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchh-hceeCCCCcChhcCCC
Confidence 543 46899999888754 78999887667654 555 5778888999999999999976 43333322121 11
Q ss_pred --CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 304 --YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 304 --gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
..++++.|++|.+ +|.|.|+++++++
T Consensus 239 ~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~ 268 (410)
T PRK06290 239 AKEVGVEIHSLSKAYNMTGWRLAFVVGNEL 268 (410)
T ss_pred ccccEEEEeechhhcCCchhheEeEEeCHH
Confidence 3458999999997 6778899998763
No 137
>PRK09082 methionine aminotransferase; Validated
Probab=99.65 E-value=6.2e-15 Score=146.00 Aligned_cols=230 Identities=13% Similarity=0.148 Sum_probs=150.7
Q ss_pred hcccccccChHHHHHHHHHHHHhhhccccccc--CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKERQFKSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias--~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~ 156 (358)
+.+++....+.++..+.+.... ..-+++-.+ +...++.+++++...+.... .+|+. ..|.+ ++++..+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~~a~~ 79 (386)
T PRK09082 8 PQSKLPNVGTTIFTVMSALAAE-HGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP---MTGVA---ALREAIAAK 79 (386)
T ss_pred hhhHhhccCccHHHHHHHHHhh-CCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCCcH---HHHHHHHHH
Confidence 3455666666666655543332 233555432 22346889998887664322 23432 12333 566667778
Q ss_pred HHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC
Q 018300 157 ALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (358)
Q Consensus 157 la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 235 (358)
+.+.+|.+.+ ...+|.+++| +.|+..++.++++|||+|++.++.|.++.. .+...|. +++++++++++
T Consensus 80 l~~~~~~~~~-~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~ 148 (386)
T PRK09082 80 TARLYGRQYD-ADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGG--RAVRVALQPPD 148 (386)
T ss_pred HHHHhCCCCC-CCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCccc
Confidence 8888887542 1113555555 679999999999999999999886665421 2344565 45566666556
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--C---CCHHHHHHHHHHcCCEEEEeccccccccccCC-ccCCC--C---C
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--K---Y 304 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~--~---~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~pl--~---g 304 (358)
..+|++++++.+.. ++|+|++..+++|+ . .++++|.++|+++|+++++|.++. .+.+.+. .++.. + .
T Consensus 149 ~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~-~~~~~~~~~~s~~~~~~~~~ 226 (386)
T PRK09082 149 FRVDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYE-HIVFDGAGHASVLRHPELRE 226 (386)
T ss_pred ccCCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhh-hhccCCCCCCChhhCcCccC
Confidence 78999999998864 68888886556553 3 468889999999999999999975 3343322 22222 1 2
Q ss_pred CcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 305 CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 305 aDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
-.+++.|++|++ +|.|.|+++++++
T Consensus 227 ~~i~~~S~SK~~~~~G~RiG~iv~~~~ 253 (386)
T PRK09082 227 RAFVVSSFGKTYHVTGWKVGYCVAPAA 253 (386)
T ss_pred cEEEEeechhhccchhhhhhhhhCCHH
Confidence 347889999997 5778899998764
No 138
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.65 E-value=8.3e-15 Score=146.24 Aligned_cols=198 Identities=15% Similarity=0.132 Sum_probs=132.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~p 191 (358)
.+++.+.+++...+.+....+|+. ..|.+ ++++.+++++++.+|.+.. +.-+|++++| ++|+..++.++++|
T Consensus 53 ~p~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~LR~aia~~l~~~~g~~~~-~~~~I~it~Ga~~al~~~~~~l~~~ 125 (405)
T PRK06207 53 EPTPGAFELFSAGVERGGVQAYTE---YRGDA---DIRELLAARLAAFTGAPVD-AADELIITPGTQGALFLAVAATVAR 125 (405)
T ss_pred CCCHHHHHHHHHHHhcCCCccCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCCEEEeCCcHHHHHHHHHHhcCC
Confidence 466788888877665432334543 23443 5677778888888896421 0013555555 56999999999999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceec---C-CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--C
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---E-STGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 265 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~---~-~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~ 265 (358)
||+|++.++.|.++.. .+...|.. +++++++ + ++..+|+++|++.+.. ++|+|++..++||+ .
T Consensus 126 Gd~Vlv~~P~y~~~~~--------~~~~~g~~--v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~ 194 (405)
T PRK06207 126 GDKVAIVQPDYFANRK--------LVEFFEGE--MVPVQLDYLSADKRAGLDLDQLEEAFKA-GVRVFLFSNPNNPAGVV 194 (405)
T ss_pred CCEEEEeCCCchhHHH--------HHHHcCCE--EEEEeccccCcccCCCcCHHHHHHhhhh-cCeEEEECCCCCCCCcC
Confidence 9999999987765432 23445654 3444443 1 2357999999998764 68888777667654 5
Q ss_pred CC---HHHHHHHHHHcCCEEEEeccccccccccCC-ccCC--CCC-Cc--EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 266 FD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FKY-CD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 266 ~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~p--l~g-aD--iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.+ +++|.++|+++|++|++|+++. .+.+.+. .+.. ++. .| +++.|++|++ +|.|.|+++.+++
T Consensus 195 ~s~e~l~~l~~~a~~~~~~iI~De~Y~-~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~ 268 (405)
T PRK06207 195 YSAEEIAQIAALARRYGATVIVDQLYS-RLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPA 268 (405)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecccc-ccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHH
Confidence 54 7788899999999999999965 4443332 1111 111 12 7889999997 5889999998763
No 139
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.65 E-value=6.1e-15 Score=141.90 Aligned_cols=197 Identities=20% Similarity=0.229 Sum_probs=138.7
Q ss_pred CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCC-CCCcceEEeCCCHHHHHHHHHHhc
Q 018300 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTAIL 189 (358)
Q Consensus 111 ~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~-~~~~v~V~~~SGt~A~~~a~~all 189 (358)
+-.++|.|++|+...+.+ ...|||. +. +++-+.+++|.++..+-+. .+| .++..+...++..++.++.
T Consensus 36 Df~~pp~i~~Al~~rvdh-GvfGY~~-----~~---~~~~~ai~~w~~~r~~~~i~~e~--i~~~p~VVpgi~~~I~~~T 104 (388)
T COG1168 36 DFPTPPEIIEALRERVDH-GVFGYPY-----GS---DELYAAIAHWFKQRHQWEIKPEW--IVFVPGVVPGISLAIRALT 104 (388)
T ss_pred cCCCCHHHHHHHHHHHhc-CCCCCCC-----CC---HHHHHHHHHHHHHhcCCCCCcce--EEEcCcchHhHHHHHHHhC
Confidence 557899999999887654 3457774 22 2355567888888888763 333 3344455679999999999
Q ss_pred cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC--CCCHHHHHHHhhhcCCeEEEE-cCCC-CCCC
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG--LVDYDMLEKTAILFRPKLIIA-GASA-YPRD 265 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~iD~d~le~~i~~~~~klIi~-~~s~-~~~~ 265 (358)
+|||.|++..|.|.... +.++..|+.+ ++.++..+++ .+|+++||+.+...++|++++ +++| .|+.
T Consensus 105 ~~gd~Vvi~tPvY~PF~--------~~i~~n~R~~--i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grv 174 (388)
T COG1168 105 KPGDGVVIQTPVYPPFY--------NAIKLNGRKV--IENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRV 174 (388)
T ss_pred cCCCeeEecCCCchHHH--------HHHhhcCcEE--EeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcc
Confidence 99999999988665421 2456677744 4433443344 689999999988777787665 5443 4555
Q ss_pred C---CHHHHHHHHHHcCCEEEEeccccccccccCCccCC---CC--CCc--EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK--YCD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 266 ~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p---l~--gaD--iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+ ++.+|.++|++||++||+|+-|+ .++..|....| ++ .+| +.+.|.+|+| +|.+.+.++..++
T Consensus 175 wt~eeL~~i~elc~kh~v~VISDEIHa-Dlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~ 249 (388)
T COG1168 175 WTKEELRKIAELCLRHGVRVISDEIHA-DLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR 249 (388)
T ss_pred ccHHHHHHHHHHHHHcCCEEEeecccc-cccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH
Confidence 5 47889999999999999999998 77776632222 33 455 6678889996 6777776666554
No 140
>PLN02483 serine palmitoyltransferase
Probab=99.65 E-value=5.2e-15 Score=151.27 Aligned_cols=206 Identities=23% Similarity=0.233 Sum_probs=130.8
Q ss_pred hcccccccCCCC-----cHHHHHHHhhhhhcccCCCCCCCcCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 018300 103 KSLELIASENFT-----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (358)
Q Consensus 103 ~~i~lias~n~~-----s~~V~~al~~~l~~~~~~G~pg~r~~~G-~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~S 176 (358)
..+++ +|.||. ++.+.++....+. +|..+..+.|...| .+..+++| +.+++++|.+. .+.+++
T Consensus 101 ~~~n~-~s~~YLgl~~~~~~~~~~~~~ai~-~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~ 169 (489)
T PLN02483 101 RCLNL-GSYNYLGFAAADEYCTPRVIESLK-KYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGM 169 (489)
T ss_pred eEEEe-ecCCccCcCCCCHHHHHHHHHHHH-HhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECC
Confidence 44554 677764 2233333333322 34344455564444 44444444 55889999765 367789
Q ss_pred CHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh------c
Q 018300 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------F 250 (358)
Q Consensus 177 Gt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~------~ 250 (358)
|+.++..++.++++|||+|++.++.|.+... .+...|..+. .++.+ |.+++++.+++ .
T Consensus 170 G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~--------~~~~~Ga~v~--~~~~~------d~~~le~~l~~~i~~~~p 233 (489)
T PLN02483 170 GYATNSTIIPALIGKGGLIISDSLNHNSIVN--------GARGSGATIR--VFQHN------TPSHLEEVLREQIAEGQP 233 (489)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcchhhHHHHH--------HHHHcCCeEE--EEeCC------CHHHHHHHHHhhhhcccc
Confidence 9999999999999999999998886655422 3345666443 33332 45666554431 1
Q ss_pred C-----CeEE-EEcC--CCCCCCCCHHHHHHHHHHcCCEEEEecccccccccc-CC--cc-CCC--CCCcEEEEcCcCcC
Q 018300 251 R-----PKLI-IAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA-DPF--KYCDVVTTTTHKSL 316 (358)
Q Consensus 251 ~-----~klI-i~~~--s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~--~~-~pl--~gaDiv~~S~hK~L 316 (358)
+ .+++ +++. +..|...++++|.++|+++|++|++|++|+.|.... |. .+ ..+ .+.|++++|++|+|
T Consensus 234 ~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~ 313 (489)
T PLN02483 234 RTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF 313 (489)
T ss_pred ccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc
Confidence 1 1544 4433 234667899999999999999999999998765421 11 11 112 26799999999998
Q ss_pred ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 317 RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 317 ~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|+.||++++++ ++.+.+..
T Consensus 314 -g~~GG~i~~~~------~li~~l~~ 332 (489)
T PLN02483 314 -GSCGGYIAGSK------ELIQYLKR 332 (489)
T ss_pred -ccCceEEEcCH------HHHHHHHH
Confidence 45789999877 45555554
No 141
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.65 E-value=1.3e-14 Score=143.37 Aligned_cols=221 Identities=16% Similarity=0.142 Sum_probs=137.5
Q ss_pred cccChHHHHHHHHHHHHhh---hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 018300 84 GEADPEVCEIITKEKERQF---KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (358)
Q Consensus 84 ~~~d~~~~~~i~~e~~~~~---~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la 158 (358)
..++|..|..++.-+.+.. +.|+|-..++ .+++.+++++...+.......|+. ..| .++ .|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g------~~~-lr~~ia 76 (380)
T PRK06225 7 AKVPPSGFKTSNEFFDYVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPP---PEG------FPE-LRELIL 76 (380)
T ss_pred cccCcchhhhHHHHHHHHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC---Ccc------hHH-HHHHHH
Confidence 3445555555555444432 3344433333 568999999988765432222322 112 222 456688
Q ss_pred HHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec--CCCC
Q 018300 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTG 236 (358)
Q Consensus 159 ~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ 236 (358)
+++|+++++ .+++.++++|+..++.+++++||+|++.++.|..+. ..+...|.. +++++++ ++++
T Consensus 77 ~~l~~~~~~---v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~--------~~~~~~g~~--~~~v~~~~~~~~~ 143 (380)
T PRK06225 77 KDLGLDDDE---ALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID--------NFASRFGAE--VIEVPIYSEECNY 143 (380)
T ss_pred HhcCCCCCc---EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH--------HHHHHhCce--EEeeccccccCCc
Confidence 899998742 233445667999999999999999999887543321 123345653 4444443 2234
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCC--CCC---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEE
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~ 310 (358)
.+|++++++.+.. ++++|++..+++| ... ++++|.++|+++|+++++|+++. ++.........++ ...+++.
T Consensus 144 ~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~i~~~ 221 (380)
T PRK06225 144 KLTPELVKENMDE-NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR-DFAREHTLAAEYAPEHTVTSY 221 (380)
T ss_pred cCCHHHHHhhcCC-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH-HHhccCCchhhcCCCCEEEEe
Confidence 7999999998764 6888876555544 333 58899999999999999999864 3221110001112 3457788
Q ss_pred cCcCcCc--cCcEEEEEEeCC
Q 018300 311 TTHKSLR--GPRGGMIFFKKD 329 (358)
Q Consensus 311 S~hK~L~--Gp~GG~I~~~~~ 329 (358)
|++|+++ |.|.|+++++++
T Consensus 222 s~SK~~g~~G~RiG~i~~~~~ 242 (380)
T PRK06225 222 SFSKIFGMAGLRIGAVVATPD 242 (380)
T ss_pred echhhcCCccceeEEEecCHH
Confidence 9999983 556799999763
No 142
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.65 E-value=2.2e-14 Score=141.80 Aligned_cols=230 Identities=17% Similarity=0.133 Sum_probs=142.6
Q ss_pred ccccccChHHHHHHHHHHHHh---h-hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQ---F-KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~---~-~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~ 154 (358)
+++....+..+..+.+...+. . .-++|-.+++ .+++.+++++...+.......|+. ..|. .++.+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr~aia 79 (385)
T PRK09276 6 DRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPS---YEGM---LEFRKAVA 79 (385)
T ss_pred hHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCc---HHHHHHHH
Confidence 344555555554443333222 2 3344443333 457788988877654322223433 2233 25666666
Q ss_pred HHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC
Q 018300 155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (358)
Q Consensus 155 ~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (358)
+++.+.+|.+.+ ..-+|.+++|+ +|+..++.++++|||+|+++++.|..+.. .....|. +++.+++++
T Consensus 80 ~~~~~~~g~~~~-~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~~~~v~~~~ 148 (385)
T PRK09276 80 DWYKRRFGVELD-PETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKI--------GTIFAGG--EPYFMPLKE 148 (385)
T ss_pred HHHHHHhCCCCC-CCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHH--------HHHHcCC--EEEEEecCC
Confidence 677666675321 10136666665 69999999999999999999986654321 2234565 444555654
Q ss_pred CC-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCC-ccC--CCC-
Q 018300 234 ST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK- 303 (358)
Q Consensus 234 ~~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~--pl~- 303 (358)
++ ..+|++++++.+.. ++|+|++..++|| ...+ +++|.++|+++|+++++|+++. .+...+. .++ .++
T Consensus 149 ~~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~ 226 (385)
T PRK09276 149 ENGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYS-EIAYDGYKPPSFLEVPG 226 (385)
T ss_pred CCCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchh-heecCCCCCCChhccCC
Confidence 43 46899999887754 7898888766665 4555 5788889999999999999976 3333221 111 122
Q ss_pred --CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 304 --YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 304 --gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
...+++.|++|.+ +|.|.|+++++++
T Consensus 227 ~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~ 256 (385)
T PRK09276 227 AKDVGIEFHSLSKTYNMTGWRIGFAVGNAD 256 (385)
T ss_pred CcCCEEEEecchhhcCCcchhheeeeCCHH
Confidence 2247789999987 5667799998764
No 143
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.64 E-value=1.5e-14 Score=143.48 Aligned_cols=227 Identities=14% Similarity=0.124 Sum_probs=143.6
Q ss_pred cccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
++++..+....+..+.+.......-++|-..++ .+++.+++++...+.... .+|.. ..|. .++++.+.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia~~~ 83 (391)
T PRK08361 11 AGRINLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEGW-THYTP---NAGI---PELREAIAEYY 83 (391)
T ss_pred hHHHHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCc---HHHHHHHHHHH
Confidence 455555555554444333322233455554333 246788888877654322 12321 1233 35776666666
Q ss_pred HHHcCC--CCCCCcceEEeCC-CHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC
Q 018300 158 LAAFNL--DENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (358)
Q Consensus 158 a~lfg~--~~~~~~v~V~~~S-Gt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~ 234 (358)
.+.+|. +++ +|.+++ +++|+..++.++++|||+|+++++.|.++.. .+...|. ++++++++++
T Consensus 84 ~~~~g~~~~~~----~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~ 149 (391)
T PRK08361 84 KKFYGVDVDVD----NVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEA--KPIRIPLREE 149 (391)
T ss_pred HHHhCCCCCcc----cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCC--EEEEEecCCc
Confidence 666664 343 344555 4569999999999999999999987655422 2334565 4555556544
Q ss_pred -CCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCC-ccCC--CC-C
Q 018300 235 -TGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK-Y 304 (358)
Q Consensus 235 -~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~p--l~-g 304 (358)
+..+|++++++.+.. ++++|++..+++ |...| +++|.++|+++++++++|+++. .+...+. .+.. ++ .
T Consensus 150 ~~~~~d~~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~ 227 (391)
T PRK08361 150 NEFQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE-HFLYEGAKHYPMIKYAPD 227 (391)
T ss_pred cCCCCCHHHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccc-cceeCCCCCCCHhhcCCC
Confidence 347999999998764 678887765565 45677 7888999999999999999976 3332221 1111 12 3
Q ss_pred CcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 305 CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 305 aDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.++++.|++|++ +|.|.|+++++++
T Consensus 228 ~~i~~~s~SK~~~~~GlRiG~~~~~~~ 254 (391)
T PRK08361 228 NTILANSFSKTFAMTGWRLGFVIAPEQ 254 (391)
T ss_pred CEEEEecCchhcCCcHhhhhhhccCHH
Confidence 468899999987 4556799999764
No 144
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.64 E-value=2.3e-15 Score=148.44 Aligned_cols=164 Identities=21% Similarity=0.195 Sum_probs=112.6
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCc
Q 018300 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 143 ~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
++...++|+. +++++ .+. .+.+.||+.|+..++.++++|||+|+++++.|+++.... ...+...|.
T Consensus 50 ~p~~~~Le~~----lA~l~-~~~-----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~----~~~l~~~G~ 115 (366)
T PRK07582 50 NPTWRALEAA----LGELE-GAE-----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALA----REYLAPLGV 115 (366)
T ss_pred CccHHHHHHH----HHHHc-CCC-----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH----HHHHhcCeE
Confidence 4445566654 67777 222 477899999999999999999999999887665532110 011122354
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccC
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~ 300 (358)
++..++.+++ .+ .. . .++|+|++..+++| ...|+++|.++|+++|+++++|++|+... + ..
T Consensus 116 --~v~~v~~~~~-----~~---~~-~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~--~~ 178 (366)
T PRK07582 116 --TVREAPTAGM-----AE---AA-L-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---G--QR 178 (366)
T ss_pred --EEEEECCCCh-----HH---Hh-c-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---c--cC
Confidence 4444444311 11 22 2 36889988777765 46899999999999999999999986432 1 23
Q ss_pred CCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 301 pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|++ ++|++++|+||+|.||. +|+++++++ ++.+++..
T Consensus 179 p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~-----~l~~~l~~ 219 (366)
T PRK07582 179 PLELGADLVVASDTKALTGHSDLLLGYVAGRDP-----ELMAAVER 219 (366)
T ss_pred chhcCCcEEEecccccccCCCCeeEEEEEcCcH-----HHHHHHHH
Confidence 566 89999999999998876 488888655 55555543
No 145
>PRK07777 aminotransferase; Validated
Probab=99.64 E-value=3.1e-14 Score=140.90 Aligned_cols=227 Identities=14% Similarity=0.133 Sum_probs=142.2
Q ss_pred cccccChHHHHHHHHHHHHhhhcccccc--cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHH
Q 018300 82 SLGEADPEVCEIITKEKERQFKSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (358)
Q Consensus 82 ~l~~~d~~~~~~i~~e~~~~~~~i~lia--s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~ 159 (358)
+++.+.++++..+.+.... ...++|-. ++...++.+.+++...+.... .+|+. ..|. .++++.+.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia~~~~~ 76 (387)
T PRK07777 5 RLRPFGTTIFAEMSALAVR-TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYPP---GPGI---PELRAAIAAQRRR 76 (387)
T ss_pred hhhhcCccHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCC---HHHHHHHHHHHHH
Confidence 3555666655544444432 23455442 233345667777666554321 22332 1233 3567766777777
Q ss_pred HcCCCCCCCcceEEeCC-CHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC--CC
Q 018300 160 AFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TG 236 (358)
Q Consensus 160 lfg~~~~~~~v~V~~~S-Gt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~ 236 (358)
.+|.+.. ..-+|.+++ |+.|+.+++.++++|||+|++.++.|.++.. .+...|.. .++++++++ ++
T Consensus 77 ~~g~~~~-~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~--------~~~~~g~~--~~~~~~~~~~~~~ 145 (387)
T PRK07777 77 RYGLEYD-PDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAA--------VIAMAGAH--RVPVPLVPDGRGF 145 (387)
T ss_pred HhCCCCC-CCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHCCCE--EEEeecCCccCCC
Confidence 7887532 101244454 5679999999999999999998876654321 23345653 344445543 34
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCC--CCC---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCC------CCC
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------KYC 305 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl------~ga 305 (358)
.+|++++++.+.. ++++|++..+++| ... ++++|.++|+++|+++++|+++. ++.+.+....++ .+.
T Consensus 146 ~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~ 223 (387)
T PRK07777 146 ALDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYE-HLVFDGARHLPLATLPGMRER 223 (387)
T ss_pred cCCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccch-hcccCCCCcccHhhCCCCcCc
Confidence 6999999998764 6888888766654 333 48889999999999999999975 444322211122 135
Q ss_pred cEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 306 DVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 306 Div~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
++++.|++|+| +|.|.|+++.+++
T Consensus 224 ~i~~~S~SK~~g~~GlRiG~~~~~~~ 249 (387)
T PRK07777 224 TVTISSAAKTFNVTGWKIGWACGPAP 249 (387)
T ss_pred EEEEeechhhccCcCceeEEEecCHH
Confidence 68899999997 4667799998763
No 146
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.63 E-value=3.1e-15 Score=147.26 Aligned_cols=202 Identities=14% Similarity=0.132 Sum_probs=134.9
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCC-CcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg-~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~ 182 (358)
.+.++|++..+|+.|++|+...+.+..+.|... .......++.+.+++ ++++++++||...+ +.+.+...|||.|+.
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~-~~~~l~~l~~~~~~-~~v~~~~gsgt~~~E 81 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEE-AEADLRELLNIPDN-YKVLFLQGGASLQFA 81 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHH-HHHHHHHHhCCCCC-cEEEEEcCCchHHHH
Confidence 356789999999999999988764322111110 112335566666665 79999999998332 224455568888999
Q ss_pred HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHH-HhhhcCCeEEEEcC--
Q 018300 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPKLIIAGA-- 259 (358)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~-~i~~~~~klIi~~~-- 259 (358)
+++.+++.+||++++.. +|.++|.+. +.++..|.. ..+. .++..+..+..++++ .+++ ++++|.+.+
T Consensus 82 a~~~nl~~~g~~~l~i~---~G~fg~r~~---~~a~~~g~~-~~~~--~~~~~g~~~~~~~~~~~l~~-~~~~V~~th~e 151 (360)
T PRK05355 82 MVPMNLLGGGKKADYVD---TGSWSKKAI---KEAKKYGEV-NVAA--SSEDDGFTYIPPLDEWQLSD-DAAYVHYTSNE 151 (360)
T ss_pred HHHHhcCCCCCeEEEEE---CCHHHHHHH---HHHHHhCCc-eEEe--cccccCCCCCCChhhccCCC-CCCEEEEccCC
Confidence 99999999999998775 355555542 223344542 3333 332244555545544 5544 688887654
Q ss_pred CCCCCCC-CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 260 SAYPRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 260 s~~~~~~-dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+++|... |+++| +|+++++|++|++|.. +.+++..|++++|.||+| ||.| |+++.+++
T Consensus 152 TstGv~~~~i~~i------~g~l~vVDavss~g~~-----~idv~~~d~~~~ssqK~l-gP~Glg~l~~s~~ 211 (360)
T PRK05355 152 TIDGTEFHELPDT------GDVPLVADMSSDILSR-----PIDVSKFGLIYAGAQKNI-GPAGLTIVIVRED 211 (360)
T ss_pred CcceEecCccccc------CCCcEEEEcCccccCc-----cCCHHHccEEEEeccccc-cCCceEEEEECHH
Confidence 3456665 66665 8999999999998864 233336689999999987 6998 88888874
No 147
>PRK08912 hypothetical protein; Provisional
Probab=99.63 E-value=3.5e-14 Score=140.57 Aligned_cols=228 Identities=14% Similarity=0.115 Sum_probs=144.5
Q ss_pred ccccccChHHHHHHHHHHHHhhhcccccc--cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQFKSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~~~~i~lia--s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la 158 (358)
+++...++..+..+.+.... ...++|-. ++...++.+.+++...+.+.. .+|+. ..|.+ ++++.+.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~ia~~~~ 77 (387)
T PRK08912 6 PVFADLPTTIFEVMSQLARE-HGAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPP---MMGLP---ELRQAVAAHYA 77 (387)
T ss_pred HHHhhCCCCHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCcH---HHHHHHHHHHH
Confidence 44555566666555544432 23344432 233456778887766554321 23443 22333 56666677777
Q ss_pred HHcCCCCCCCcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCC
Q 018300 159 AAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (358)
Q Consensus 159 ~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (358)
+.+|.+.+ +..+|.+++| ++|+..++.++++|||+|+++++.|.++.. .+...|. ++++++++++++.
T Consensus 78 ~~~g~~~~-~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~ 146 (387)
T PRK08912 78 RFQGLDLD-PETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP--------LIRRAGG--VPRLVRLEPPHWR 146 (387)
T ss_pred HHhCCCCC-CcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCcccCc
Confidence 77775421 1113555555 669999999999999999999987655421 2345565 4445556544568
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCC-ccC--CCC---CCc
Q 018300 238 VDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK---YCD 306 (358)
Q Consensus 238 iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~--pl~---gaD 306 (358)
+|++++++.+.. ++|+|++..+++| ...+ +++|.++|+++|+++++|+++. .+.+.+. .+. .++ ..+
T Consensus 147 ~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK08912 147 LPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE-HVVFDGRRHIPLMTLPGMRERT 224 (387)
T ss_pred CCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh-hcccCCCCCcChhhCCCccCce
Confidence 999999998754 7888887766665 3454 7778999999999999999976 3333321 111 111 346
Q ss_pred EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 307 VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 307 iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+++.|++|.+ +|.|.|+++++++
T Consensus 225 i~~~S~SK~~g~~GlRiG~~~~~~~ 249 (387)
T PRK08912 225 VKIGSAGKIFSLTGWKVGFVCAAPP 249 (387)
T ss_pred EEEeechhhccCcCceeEEEecCHH
Confidence 8899999986 5667799998764
No 148
>PRK07337 aminotransferase; Validated
Probab=99.63 E-value=4.8e-14 Score=139.63 Aligned_cols=226 Identities=15% Similarity=0.109 Sum_probs=141.4
Q ss_pred ccccccChHHHHHHHHHHHHh----hhcccccccC--CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQ----FKSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~----~~~i~lias~--n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~ 154 (358)
+++....+..+..+.+...+. ..-+.|-..+ ..+++.+.+++...+.+.. .+|+. ..|. .++++.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia 77 (388)
T PRK07337 5 ARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGV-TQYTS---ALGL---APLREAIA 77 (388)
T ss_pred hHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCC---HHHHHHHH
Confidence 344444554444444433322 2334443333 3357888999887665321 23332 1232 35666666
Q ss_pred HHHHHHcCC--CCCCCcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 155 KRALAAFNL--DENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 155 ~~la~lfg~--~~~~~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
+++.+.+|. +++ +|.+++| +.|+..++.+++++||+|+++++.|.++.. .+...|. +++++++
T Consensus 78 ~~~~~~~~~~~~~~----~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~ 143 (388)
T PRK07337 78 AWYARRFGLDVAPE----RIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRH--------FVAAAEG--RPVLVPS 143 (388)
T ss_pred HHHHHHhCCCCChH----hEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeec
Confidence 666666675 332 3545555 569999999999999999999987766432 2234455 3445556
Q ss_pred cCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-C
Q 018300 232 DES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y 304 (358)
Q Consensus 232 ~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-g 304 (358)
+++ ++.+|++++++.+.. ++++|++..+++|+ .. ++++|.++|+++|+++++|.++. ++...+...+.+. +
T Consensus 144 ~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~ 221 (388)
T PRK07337 144 GPAERFQLTAADVEAAWGE-RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQ-GLSYDAAPVSALSLG 221 (388)
T ss_pred CCccCCcCCHHHHHhhcCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCcChhhcc
Confidence 543 458999999998764 67877776566553 44 47888999999999999999865 4443332222223 3
Q ss_pred Cc-EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 305 CD-VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 305 aD-iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.+ +++.|++|.+ +|.|.|+++++++
T Consensus 222 ~~vi~~~S~SK~~~~~G~RiG~~~~~~~ 249 (388)
T PRK07337 222 DDVITINSFSKYFNMTGWRLGWLVVPEA 249 (388)
T ss_pred CCEEEEEechhhcCCchhheeeeecCHH
Confidence 34 4577999987 5788899998863
No 149
>PRK08068 transaminase; Reviewed
Probab=99.63 E-value=5.2e-14 Score=139.51 Aligned_cols=229 Identities=14% Similarity=0.104 Sum_probs=141.0
Q ss_pred cccccChHHHHHHHHHHHHh----hhccccccc--CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHH
Q 018300 82 SLGEADPEVCEIITKEKERQ----FKSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (358)
Q Consensus 82 ~l~~~d~~~~~~i~~e~~~~----~~~i~lias--~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~ 155 (358)
++.+..+..+..+.+...+. ..-++|-.+ ....++.+.+++...+......+|+. ..|.. ++++.+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~---~lr~aia~ 81 (389)
T PRK08068 8 LLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP---FRGYP---FLKEAAAD 81 (389)
T ss_pred HhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCCH---HHHHHHHH
Confidence 34444444444443333322 233455422 22346778888877655332223432 12333 56666667
Q ss_pred HHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC
Q 018300 156 RALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (358)
Q Consensus 156 ~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~ 234 (358)
++.+.+|.+-+ +.-+|.+++| +.++..++.++++|||+|++++|.|..+.. .+...|. ++++++++++
T Consensus 82 ~~~~~~g~~~~-~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~ 150 (389)
T PRK08068 82 FYKREYGVTLD-PETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLS--------GVALARA--QFETMPLIAE 150 (389)
T ss_pred HHHHHhCCCCC-CCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEeecccc
Confidence 76666674321 1113555555 468888889999999999999987765432 2345565 4455556644
Q ss_pred C-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCC-CC----
Q 018300 235 T-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK---- 303 (358)
Q Consensus 235 ~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p-l~---- 303 (358)
+ ..+|++++++.+.. ++|+|++..+++| ...+ +++|.++|+++|+++++|+++. .+...+..+.+ +.
T Consensus 151 ~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~-~~~~~~~~~~s~~~~~~~ 228 (389)
T PRK08068 151 NNFLPDYTKIPEEVAE-KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYG-AIGFDGQKPVSFLQTPGA 228 (389)
T ss_pred cCCCCCHHHHHHhccc-cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhh-hhccCCCCCcChhhCCCc
Confidence 3 47899999988753 7898888766665 4555 4678889999999999999974 33333211111 11
Q ss_pred -CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 304 -YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 304 -gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.-.+++.|++|.| +|.|-|+++.+++
T Consensus 229 ~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 257 (389)
T PRK08068 229 KDVGIELYTLSKTFNMAGWRVAFAVGNES 257 (389)
T ss_pred cCCEEEEecchhccCCccceeEeEecCHH
Confidence 1237889999997 6778899998763
No 150
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.63 E-value=3.9e-14 Score=140.59 Aligned_cols=231 Identities=19% Similarity=0.165 Sum_probs=143.1
Q ss_pred cccccccChHHHHHHHHHHHHhhhccccccc--CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQFKSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~~~~i~lias--~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
++++...+......+.+.......-+++-.+ +..+++.+.+++...+.... ..|+. ..|. .++++.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia~~~ 80 (391)
T PRK07309 8 NKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQ-SHYTG---MAGL---LELRQAAADFV 80 (391)
T ss_pred HhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCc---HHHHHHHHHHH
Confidence 3445555554444443322211233444322 23447778888876654322 12322 1232 36777777777
Q ss_pred HHHcCCCCCCCcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC
Q 018300 158 LAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (358)
Q Consensus 158 a~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (358)
...+|...... .+|.+++| ++|+..++.+++++||+|++.++.|.++.. .....|. +++.++.++++.
T Consensus 81 ~~~~~~~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~ 149 (391)
T PRK07309 81 KEKYNLDYAPE-NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEP--------IVNLVGA--EIVEIDTTENDF 149 (391)
T ss_pred HHHhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEEecCCcCC
Confidence 76667632100 13555555 679999999999999999999887766421 2334565 445555654445
Q ss_pred CCCHHHHHHHhhhc--CCeEEEEcCCCCC--CCC---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCc-
Q 018300 237 LVDYDMLEKTAILF--RPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD- 306 (358)
Q Consensus 237 ~iD~d~le~~i~~~--~~klIi~~~s~~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaD- 306 (358)
.+|.+++++.++.. ++|+|++..+++| ... ++++|.++|+++|+++++|+++. .+...+....++. ..+
T Consensus 150 ~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~~ 228 (391)
T PRK07309 150 VLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYS-ELTYTGEPHVSIAEYLPDQ 228 (391)
T ss_pred cCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEcccc-ceeeCCCCCCCHHHhccCC
Confidence 79999999887642 5788887755654 344 48889999999999999999976 4443232111221 112
Q ss_pred -EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 307 -VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 307 -iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+++.|++|.+ +|.|.|+++++++
T Consensus 229 ~i~~~S~SK~~g~~GlRvG~~v~~~~ 254 (391)
T PRK07309 229 TILINGLSKSHAMTGWRIGLIFAPAE 254 (391)
T ss_pred EEEEecChhhccCccceeEEEEeCHH
Confidence 7889999997 6778899999874
No 151
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.62 E-value=3.7e-15 Score=148.71 Aligned_cols=183 Identities=17% Similarity=0.174 Sum_probs=125.1
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhc-cc
Q 018300 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRR-VS 218 (358)
Q Consensus 140 ~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~-~~ 218 (358)
|.|.+...++|+. ++++||.++ .+.++||+.|++.++...++|||+| +++ .|+.. ... +.
T Consensus 67 yag~~s~~~lE~~----va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn---~~f~T-----t~ahIe 127 (450)
T TIGR02618 67 YAGSRNFYHLERT----VRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGN---MYFTT-----TRYHQE 127 (450)
T ss_pred hcCCCcHHHHHHH----HHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCc---eeHHH-----HHHHHH
Confidence 5566666778774 788999987 3677899999887766669999988 332 22221 112 34
Q ss_pred cCCceEEEEecee---------cCCCCCCCHHHHHHHhhhcC---CeEEEE-cCCC-C-CCC---CCHHHHHHHHHHcCC
Q 018300 219 GTSIYFESMPYRL---------DESTGLVDYDMLEKTAILFR---PKLIIA-GASA-Y-PRD---FDYPRMRQIADAVGA 280 (358)
Q Consensus 219 ~~g~~~~~~~~~~---------~~~~~~iD~d~le~~i~~~~---~klIi~-~~s~-~-~~~---~dl~~I~~ia~e~g~ 280 (358)
..|. .++.+.. ++.++.+|+++|++.+++.. +++|.+ ...+ . |.. .++++|.++|+++|+
T Consensus 128 ~~Ga--v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl 205 (450)
T TIGR02618 128 KNGA--TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGI 205 (450)
T ss_pred hCCe--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCC
Confidence 4554 2222212 24568999999999987532 224433 2223 2 455 468999999999999
Q ss_pred EEEEeccccccccc------cCCccCCC--------CCCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhhc--c
Q 018300 281 LLMMDMAHISGLVA------ASVVADPF--------KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA--V 344 (358)
Q Consensus 281 ~livD~Ah~~Gl~~------~g~~~~pl--------~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~--~ 344 (358)
+|+.|+||.+|--+ .|....++ .++|.+++|+||...+|.||+|+++++ ++.++++.. .
T Consensus 206 ~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~-----~l~~k~r~~~~~ 280 (450)
T TIGR02618 206 KVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD-----EMFQSAKELVVV 280 (450)
T ss_pred EEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH-----HHHHHHHHHhhh
Confidence 99999999985311 12222222 389999999999999999999999887 888888776 4
Q ss_pred CCcc
Q 018300 345 FPGL 348 (358)
Q Consensus 345 f~g~ 348 (358)
+.|+
T Consensus 281 ~eG~ 284 (450)
T TIGR02618 281 FEGM 284 (450)
T ss_pred cCCc
Confidence 4443
No 152
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.62 E-value=1.1e-14 Score=146.88 Aligned_cols=208 Identities=21% Similarity=0.221 Sum_probs=143.9
Q ss_pred cccccccCCCC----cHHHHHHHhhhhhcccCCCCCCCcCCCCcH-HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH
Q 018300 104 SLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (358)
Q Consensus 104 ~i~lias~n~~----s~~V~~al~~~l~~~~~~G~pg~r~~~G~~-~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt 178 (358)
.+....|++|+ +|.++++....+ .+|..|..++|...|+. ..+++|+ .+++++|.+.+ +.++||.
T Consensus 103 ~~l~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE~----~LA~f~g~e~a-----ll~sSGy 172 (476)
T PLN02955 103 KLLLFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLES----SLADLKKKEDC-----LVCPTGF 172 (476)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHHH----HHHHHHCCCcE-----EEECChH
Confidence 34445899996 899999988775 56767777888777764 3344555 58999999883 7789999
Q ss_pred HHHHHHHHHhc--------------cCCCEEEecCCCCCcccccccccchhccccCCc--eEEEEeceecCCCCCCCHHH
Q 018300 179 PANFEVYTAIL--------------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--YFESMPYRLDESTGLVDYDM 242 (358)
Q Consensus 179 ~A~~~a~~all--------------~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~iD~d~ 242 (358)
.||..++.++. +++|.|+.....|.+-. . .+.++.. ..++..|+ ..|+++
T Consensus 173 ~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~------d--G~~ls~~~~~a~~~~f~------HND~~~ 238 (476)
T PLN02955 173 AANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASII------D--GVRLAERQGNVEVFVYR------HCDMYH 238 (476)
T ss_pred HHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHH------H--HHHhccccCCceEEEeC------CCCHHH
Confidence 99999998872 45667776554333211 1 2222210 12344443 458899
Q ss_pred HHHHhhhcC--CeEEEEcC--CCCCCCCCHHHHHHHHHHcCCEEEEecccccccccc---CCcc-CCC-CCCcEEEEcCc
Q 018300 243 LEKTAILFR--PKLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTH 313 (358)
Q Consensus 243 le~~i~~~~--~klIi~~~--s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~---g~~~-~pl-~gaDiv~~S~h 313 (358)
|+++++..+ .++|+++. +..|...|+++|.++|++||+.|++|.||+.|..+. |... ..+ +..|++++|+.
T Consensus 239 Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLs 318 (476)
T PLN02955 239 LNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLS 318 (476)
T ss_pred HHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCc
Confidence 998886432 34666652 445678899999999999999999999999887653 2111 112 26789999999
Q ss_pred CcCccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 314 KSLRGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 314 K~L~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|.+ |-+||+|++++ ++.+.+..
T Consensus 319 KA~-G~~GGfi~gs~------~~~~~l~~ 340 (476)
T PLN02955 319 KAA-GCHGGFIACSK------KWKQLIQS 340 (476)
T ss_pred cch-hccCceeecHH------HHHHHHHH
Confidence 986 56799999987 45555543
No 153
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.62 E-value=3.4e-14 Score=146.25 Aligned_cols=225 Identities=19% Similarity=0.116 Sum_probs=146.1
Q ss_pred hcccccccChHHHHHHHHHHHHhh-hc---ccccccC-----CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKERQF-KS---LELIASE-----NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDEL 149 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~~~-~~---i~lias~-----n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~l 149 (358)
.++++..+.+.....+.++..+.. .+ ++|-.++ ..+|+.+++++...+.. ..+|+. ..|.. ++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--~~~Y~~---~~G~~---~l 190 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--TEGYSD---SKGLF---SA 190 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc--CCCCCC---CcChH---HH
Confidence 577888888887765544444432 23 3443322 23588899998876542 234544 12332 45
Q ss_pred HHHHHHHHHHHc--CCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEE
Q 018300 150 ETLCQKRALAAF--NLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (358)
Q Consensus 150 E~~~~~~la~lf--g~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (358)
++.+.+++.... +++++ +|.+++|+ +++..++.++++|||+|++++|.|..+.. .+...|. ++
T Consensus 191 Reaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~--------~~~~~g~--~~ 256 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA--------CVNLAGG--TA 256 (517)
T ss_pred HHHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH--------HHHHCCC--EE
Confidence 555444444333 34443 56677776 58999999999999999999987655422 2345565 45
Q ss_pred EeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCC-cc
Q 018300 227 MPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VA 299 (358)
Q Consensus 227 ~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~ 299 (358)
++++++++ +..+|++++++.+.. ++|+|++..++||+ ..+ +++|+++|+++|++|++|+++. .+.+.+. .+
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~-~~~~~~~~~~ 334 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYD-RLVMDGLEHT 334 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hhcCCCCCcc
Confidence 55556654 357999999998764 78988776677653 555 7889999999999999999965 5554332 12
Q ss_pred CCCC-CCc---EEEEcCcCcC--ccCcEEEEEEe
Q 018300 300 DPFK-YCD---VVTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 300 ~pl~-gaD---iv~~S~hK~L--~Gp~GG~I~~~ 327 (358)
+... ..| +++.|++|++ +|+|-|+++..
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCcccceEEEEee
Confidence 2111 123 3357999984 79999999854
No 154
>PRK07324 transaminase; Validated
Probab=99.62 E-value=2.2e-14 Score=141.61 Aligned_cols=166 Identities=21% Similarity=0.251 Sum_probs=115.0
Q ss_pred HHHHHHcC-CCCCCCcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 155 KRALAAFN-LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 155 ~~la~lfg-~~~~~~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
+.++++++ .+++ +|.+++| ++|+..++.++++|||+|++..|.|.++.. .+...|. +++.++++
T Consensus 69 ~~ia~~~~~~~~~----~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~ 134 (373)
T PRK07324 69 EAVASLYQNVKPE----NILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYD--------IPESLGA--EVDYWQLK 134 (373)
T ss_pred HHHHHHhcCCChh----hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEecc
Confidence 34566664 5553 3555555 569999999999999999998875544321 2234565 44555565
Q ss_pred CCCC-CCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--C
Q 018300 233 ESTG-LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y 304 (358)
Q Consensus 233 ~~~~-~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--g 304 (358)
++++ .+|++++++.+.. ++|+|++..+++| ...+ +++|+++|+++|+++++|+++. ++...+..++..+ .
T Consensus 135 ~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~s~~~~~~ 212 (373)
T PRK07324 135 EENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYR-PLDEDGSTPSIADLYE 212 (373)
T ss_pred cccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCCChhhccC
Confidence 4443 6899999988754 7899988776665 4666 8889999999999999999964 5554432232222 2
Q ss_pred CcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 305 aDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
-.+++.|++|++ +|.|-|++++++ ++.+++..
T Consensus 213 ~~I~~~s~SK~~~~~G~RiG~i~~~~------~li~~~~~ 246 (373)
T PRK07324 213 KGISTNSMSKTYSLPGIRVGWIAANE------EVIDILRK 246 (373)
T ss_pred CEEEEecchhhcCCccceeEEEecCH------HHHHHHHH
Confidence 247788999986 588889999965 45555544
No 155
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.62 E-value=1.9e-14 Score=144.69 Aligned_cols=183 Identities=14% Similarity=0.096 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhc--c-CCCEEEecCCCCCcccccccccchhccccCC
Q 018300 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL--K-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 146 ~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all--~-pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
.-.+.+...+++++++|++... ..+.+++|| .++.+++.++- + +||+|+++... |.+. .+++...|
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~--~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~t---h~S~-----~kAi~~~G 172 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIK--SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRID---QKSC-----IKAISTAG 172 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCC--EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcC---hHHH-----HHHHHHcC
Confidence 3455666677789999998321 135567788 58887777762 2 69999998753 4332 24667778
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcCCC-CC--CCCCHHHHHHHHHHcCCEEEEeccccccccccC
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASA-YP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAAS 296 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~s~-~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g 296 (358)
.....++..+++++..+|+++|++.+++. +..++++..++ ++ ...|+++|.++|+++|+++++|+||+.+.....
T Consensus 173 ~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~ 252 (444)
T TIGR03531 173 FEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYM 252 (444)
T ss_pred CeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhh
Confidence 75444442245667899999999999753 34455554443 33 468999999999999999999999986543211
Q ss_pred Ccc-CCCC--CCcEEEEcCcCcCccCc-EEEEEEeCCCCchhHHHHHHhhc
Q 018300 297 VVA-DPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 297 ~~~-~pl~--gaDiv~~S~hK~L~Gp~-GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
..+ ..++ .+|++++|+||++..|- ||+|+++++ ++.+++...
T Consensus 253 ~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~-----el~~~i~~~ 298 (444)
T TIGR03531 253 ELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE-----NFIQEISKS 298 (444)
T ss_pred hhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH-----HHHHHHHHh
Confidence 111 1222 37999999999997764 677778776 677777653
No 156
>PRK08363 alanine aminotransferase; Validated
Probab=99.62 E-value=5.7e-14 Score=139.61 Aligned_cols=191 Identities=17% Similarity=0.109 Sum_probs=125.7
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCC-HHHHHHHHHHhc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG-SPANFEVYTAIL 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SG-t~A~~~a~~all 189 (358)
.+++.+.+++.+.+.... ..|+. ..|. .++++...+++...+|. +++ +|.+++| ++|+..++.+++
T Consensus 46 ~p~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia~~~~~~~g~~~~~~----~i~it~G~~~al~~~~~~~~ 114 (398)
T PRK08363 46 QPPEHMKEAYCRAIKEGH-NYYGP---SEGL---PELREAIVKREKRKNGVDITPD----DVRVTAAVTEALQLIFGALL 114 (398)
T ss_pred CCCHHHHHHHHHHHHcCC-CCCCC---CCCc---HHHHHHHHHHHHHhcCCCCChh----hEEEeCCHHHHHHHHHHHhC
Confidence 478889999887665321 12321 1222 35666666666555563 443 4556666 569999999999
Q ss_pred cCCCEEEecCCCCCcccccccccchhccccCCceEEEEec-eecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCC
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF 266 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~ 266 (358)
+|||+|+++++.|.++.. .+...|. +.+.+ +.++++..+|.+++++.+.. ++++|++..+++| ...
T Consensus 115 ~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~ 183 (398)
T PRK08363 115 DPGDEILIPGPSYPPYTG--------LVKFYGG--VPVEYRTIEEEGWQPDIDDIRKKITE-KTKAIAVINPNNPTGALY 183 (398)
T ss_pred CCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeccccccCCcCCHHHHHhhCCc-ceEEEEEECCCCCCCcCc
Confidence 999999999987665432 2234454 33444 34444557999999988754 6788877666654 455
Q ss_pred C---HHHHHHHHHHcCCEEEEeccccccccccCCccC--CCCCCc--EEEEcCcCcC--ccCcEEEEEE
Q 018300 267 D---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFKYCD--VVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 267 d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~gaD--iv~~S~hK~L--~Gp~GG~I~~ 326 (358)
+ +++|.++|+++|+++++|+++. .+.+.+.... .++..+ +++.|++|++ +|.|-|+++.
T Consensus 184 ~~~~~~~l~~~a~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 184 EKKTLKEILDIAGEHDLPVISDEIYD-LMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred CHHHHHHHHHHHHHcCeEEEEhhhhh-hhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEE
Confidence 5 8899999999999999999976 3333332111 112222 5678999995 6778899997
No 157
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.61 E-value=2.3e-15 Score=145.99 Aligned_cols=171 Identities=19% Similarity=0.134 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCCHHHHHHHHHHhcc------------CCC--EEEecCCCCCccccc
Q 018300 144 EYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK------------PHD--RIMGLDLPHGGHLSH 208 (358)
Q Consensus 144 ~~~~~lE~~~~~~la~lfg~~-~~~~~v~V~~~SGt~A~~~a~~all~------------pGD--~Vl~~~~~~ggh~s~ 208 (358)
+...++|+.+++++++++|.+ ... ..+++.+||.||+.++.++.. +|| +|+++++.|.++.
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~-- 109 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDA--DGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE-- 109 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCC--CEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH--
Confidence 345689999999999999996 221 245667888999999988742 333 6777776554321
Q ss_pred ccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCC--CCCCCCHHHHHHHHHHcCCE
Q 018300 209 GFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASA--YPRDFDYPRMRQIADAVGAL 281 (358)
Q Consensus 209 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-----~~klIi~~~s~--~~~~~dl~~I~~ia~e~g~~ 281 (358)
+.+...|. +++.+++++ ++.+|+++|++.+.+. ++++|++..++ +|...|+++|.++|+++|++
T Consensus 110 ------~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~ 180 (345)
T cd06450 110 ------KAAAYLDV--KVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLW 180 (345)
T ss_pred ------HHHHHHhc--CeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCe
Confidence 12233454 444555664 4589999999988641 56776654433 56788999999999999999
Q ss_pred EEEeccccccccccCCcc---CCCCCCcEEEEcCcCcCccCcE-EEEEEe
Q 018300 282 LMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFK 327 (358)
Q Consensus 282 livD~Ah~~Gl~~~g~~~---~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~ 327 (358)
+++|++|+.+........ ..+.++|++++|+||++.+|.| |+++.+
T Consensus 181 l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~ 230 (345)
T cd06450 181 LHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR 230 (345)
T ss_pred EEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH
Confidence 999999987754211110 1123789999999999988765 666443
No 158
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.61 E-value=1.7e-14 Score=144.06 Aligned_cols=194 Identities=22% Similarity=0.213 Sum_probs=129.1
Q ss_pred cccCCCC----cHHHHHHHhhhhhcccCCCCCCCcCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHH
Q 018300 108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (358)
Q Consensus 108 ias~n~~----s~~V~~al~~~l~~~~~~G~pg~r~~~G~-~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~ 182 (358)
..+++|. +|.|++++...+. ++..+..+.|.+.|. +...++| +++++++|.+. .+.++||+.||.
T Consensus 51 ~~sn~yl~l~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~~ 120 (410)
T PRK13392 51 WCSNDYLGMGQHPDVIGAMVDALD-RYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSND 120 (410)
T ss_pred EECCCccCCCCCHHHHHHHHHHHH-HcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHH
Confidence 4666663 8899999987664 454444444444443 2333444 45889999754 477899999999
Q ss_pred HHHHHhc--cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhh---hcCCeEEEE
Q 018300 183 EVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI---LFRPKLIIA 257 (358)
Q Consensus 183 ~a~~all--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~---~~~~klIi~ 257 (358)
.++..+. .|||.|++....|++... .+...|..+..+ +. .|.+.+++.+. ..++++|++
T Consensus 121 ~~i~~l~~~~~g~~vi~~~~~h~s~~~--------~~~~~g~~~~~~--~~------~d~~~l~~~l~~~~~~~t~~v~i 184 (410)
T PRK13392 121 AALSTLGKLLPGCVILSDALNHASMIE--------GIRRSGAEKQVF--RH------NDLADLEEQLASVDPDRPKLIAF 184 (410)
T ss_pred HHHHHHhcCCCCCEEEEehhhhHHHHH--------HHHHcCCeEEEE--eC------CCHHHHHHHHHhccCCCCEEEEE
Confidence 9998774 489988887655544321 233455543322 21 14555555543 236788888
Q ss_pred cCCCC--CCCCCHHHHHHHHHHcCCEEEEecccccccccc-CC-cc---CCCCCCcEEEEcCcCcCccCcEEEEEEeC
Q 018300 258 GASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 258 ~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~-~~---~pl~gaDiv~~S~hK~L~Gp~GG~I~~~~ 328 (358)
..+++ |...|+++|.++|+++|+++++|++|+.|+... |. .. ...+..|+++.|++|+|+++ ||++++++
T Consensus 185 ~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-GG~~~~~~ 261 (410)
T PRK13392 185 ESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-GGYIAASA 261 (410)
T ss_pred eCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-cchhhcCH
Confidence 76554 568899999999999999999999999876531 11 11 11225789999999998654 68888766
No 159
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.61 E-value=2.6e-14 Score=139.81 Aligned_cols=196 Identities=13% Similarity=0.111 Sum_probs=134.0
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~p 191 (358)
.+|+.+++++.+.+......+|+. +...+ .|+.++++++++++ +|.+++|+. ++..++.++++|
T Consensus 35 ~~p~~~~~a~~~~~~~~~~~~y~~-------~~~~~----lr~~ia~~~~~~~~----~i~it~G~~~~l~~~~~~l~~~ 99 (351)
T PRK14807 35 ELPEEVIKNIQEIVKSSQVNIYPD-------PTAEK----LREELARYCSVVPT----NIFVGNGSDEIIHLIMLAFINK 99 (351)
T ss_pred CCCHHHHHHHHHHhhcCcccCCCC-------ccHHH----HHHHHHHHhCCCcc----cEEEecCHHHHHHHHHHHhcCC
Confidence 468999999877654322222322 11123 35557888898764 466777765 788888899999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHH
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYP 269 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~ 269 (358)
||+|++.++.+..+.. .....|. ++++++++ +++.+|++++++.+...++|+|++..+++ |...+.+
T Consensus 100 gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~ 168 (351)
T PRK14807 100 GDVVIYPHPSFAMYSV--------YSKIAGA--VEIPVKLK-EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERE 168 (351)
T ss_pred CCEEEEeCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999876554311 2234565 44555565 34679999999988655789888766665 4688999
Q ss_pred HHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 270 ~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
++.++|++++.++++|++|. ++. +...+..++ .--+++.|++|++ +|.|-|+++.++ ++.+++..
T Consensus 169 ~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~------~~~~~~~~ 237 (351)
T PRK14807 169 DIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE------NILKYLNL 237 (351)
T ss_pred HHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH------HHHHHHHH
Confidence 99999999999999999975 432 221111122 2237889999997 678889999876 55555554
No 160
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.61 E-value=7.7e-14 Score=138.13 Aligned_cols=230 Identities=14% Similarity=0.137 Sum_probs=143.2
Q ss_pred chhcccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHH
Q 018300 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (358)
Q Consensus 77 ~~~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~ 154 (358)
+++++++....+..+..+.+.......-++|--+++ .+++.+++++...+.... ..|+. ..|.+ ++++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~ia 76 (384)
T PRK06348 4 KFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-TRYTD---SGGDV---ELIEEII 76 (384)
T ss_pred hHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCcH---HHHHHHH
Confidence 345566666666655544443322223355543332 345677765544333221 22332 12332 4666666
Q ss_pred HHHHHHcCC--CCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 155 KRALAAFNL--DENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 155 ~~la~lfg~--~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
+++.+.+|. +++ +|.+++|+ +|+..++.++++|||+|++.++.|.++.. .+...|. ++++++.
T Consensus 77 ~~~~~~~~~~~~~~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~ 142 (384)
T PRK06348 77 KYYSKNYDLSFKRN----EIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD--------QIEMVGG--KPIILET 142 (384)
T ss_pred HHHHHHhCCCCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEecC
Confidence 677666554 443 45566665 59999999999999999999987765432 2334455 4455554
Q ss_pred cC-CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC
Q 018300 232 DE-STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK 303 (358)
Q Consensus 232 ~~-~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~ 303 (358)
++ ++..+|++++++.+.. ++|+|++..+++|+ .. ++++|.++|+++|++|++|+++. ++...+..+. .++
T Consensus 143 ~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~ 220 (384)
T PRK06348 143 YEEDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYD-GFSFYEDFVPMATLA 220 (384)
T ss_pred CcCcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccc-cceeCCCccchhhcC
Confidence 32 3346999999998753 78888776666654 44 37888899999999999999965 4443332111 122
Q ss_pred ---CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 304 ---YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 304 ---gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.-.+++.|++|++ +|.|.|+++++++
T Consensus 221 ~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~ 251 (384)
T PRK06348 221 GMPERTITFGSFSKDFAMTGWRIGYVIAPDY 251 (384)
T ss_pred CCcCcEEEEecchhccCCccccceeeecCHH
Confidence 1237788999996 5788999999763
No 161
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.61 E-value=7.2e-14 Score=136.56 Aligned_cols=195 Identities=14% Similarity=0.098 Sum_probs=129.3
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~p 191 (358)
.+++.+++++.+.... ...|+. ..|.. ++++.+.+++.+.+|..-+ ...+|.+++|+. |+..++.+++++
T Consensus 13 ~~~~~~~~~~~~~~~~--~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~-~~~~Iiit~Gs~~ai~~~~~~~~~~ 83 (350)
T TIGR03537 13 PTPPFIRKALIDAVPE--VSQYPS---ALGTK---ALREAISGWFERRFGVKLD-PDAQVLPSAGSKEAIFHFPLVFIDP 83 (350)
T ss_pred CCCHHHHHHHHHHHhc--cCCCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCcEEEcCChHHHHHHHHHHHcCC
Confidence 4578888888765432 223433 22333 5677677777766675321 101467788765 999999989988
Q ss_pred C---CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CC
Q 018300 192 H---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RD 265 (358)
Q Consensus 192 G---D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~ 265 (358)
| |+|+++++.|.++.. .+...|. +++++++++++ ..+|++++++.+.. ++|+|++..+++| ..
T Consensus 84 g~~~d~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~ 152 (350)
T TIGR03537 84 EEDRRRVIFGTPGYPVYER--------GALFAGG--EPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTGAT 152 (350)
T ss_pred CCCCceEEEcCCCCcchHH--------HHHhcCC--EEEEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcCcc
Confidence 8 699999886655432 2345565 45566665333 36899999998764 7898888766665 45
Q ss_pred CC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CC--cEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 266 FD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC--DVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 266 ~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-ga--Div~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
.+ +++|.++|+++|+++++|+++.. +...+..++... .. .+++.|++|++ +|.|.|+++.++
T Consensus 153 ~~~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~ 222 (350)
T TIGR03537 153 APRSYLKETIAMCREHGIILCSDECYTE-IYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDE 222 (350)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEeccccc-cccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCH
Confidence 66 88899999999999999999763 222221111111 22 37778999986 577889998765
No 162
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.61 E-value=2.7e-14 Score=133.89 Aligned_cols=195 Identities=19% Similarity=0.180 Sum_probs=145.6
Q ss_pred cccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHH
Q 018300 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (358)
Q Consensus 106 ~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~ 185 (358)
.|+|++.-.|+.|++||... ..|+- ..+++..+. ...+-++..|....+. ..++..+|+.|+..++
T Consensus 20 L~gPGPsnl~~~V~~A~~~~-----~lgh~------sPe~~qIm~-~v~egikyVFkT~n~~--tf~isgsGh~g~E~al 85 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRP-----SLGHM------SPEFVQIMD-EVLEGIKYVFKTANAQ--TFVISGSGHSGWEAAL 85 (385)
T ss_pred eecCCCcCCCHHHHHhhcCC-----ccccC------CHHHHHHHH-HHHHHHHHHhccCCCc--eEEEecCCcchHHHHH
Confidence 67899999999999998643 23432 234554444 3677789999988753 4677889999999999
Q ss_pred HHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEE--cCCCCC
Q 018300 186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA--GASAYP 263 (358)
Q Consensus 186 ~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~--~~s~~~ 263 (358)
.+++.|||+|++... |.+++.+. .-.+..|..+++++ .+ ..+...++++++.+..++|++|.+ +.++++
T Consensus 86 ~N~lePgd~vLv~~~---G~wg~ra~---D~~~r~ga~V~~v~--~~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTg 156 (385)
T KOG2862|consen 86 VNLLEPGDNVLVVST---GTWGQRAA---DCARRYGAEVDVVE--AD-IGQAVPLEEITEKLSQHKPKAVFVTHGDSSTG 156 (385)
T ss_pred HhhcCCCCeEEEEEe---chHHHHHH---HHHHhhCceeeEEe--cC-cccCccHHHHHHHHHhcCCceEEEEecCcccc
Confidence 999999999998653 55554431 12345576666665 33 245789999999999999998866 456788
Q ss_pred CCCC-HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeC
Q 018300 264 RDFD-YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKK 328 (358)
Q Consensus 264 ~~~d-l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~ 328 (358)
...| ++.+.++|++|+++++||..-++|-. +...| |+|+..+..+|.|.+|.| +.|..++
T Consensus 157 V~q~~~~~~g~lc~k~~~lllVD~VaSlggt-----~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ 220 (385)
T KOG2862|consen 157 VLQDLLAISGELCHKHEALLLVDTVASLGGT-----EFEMDEWGVDVAYTGSQKALGAPAGLSIISFSD 220 (385)
T ss_pred ccchHHHHHHHHhhcCCeEEEEechhhcCCc-----cceehhhcccEEEecchhhcCCCCCcceeecCH
Confidence 8889 67778999999999999998666532 22334 999999999999999999 6655554
No 163
>PRK15029 arginine decarboxylase; Provisional
Probab=99.61 E-value=8.9e-15 Score=154.69 Aligned_cols=164 Identities=16% Similarity=0.093 Sum_probs=119.9
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 152 LCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 152 ~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
++++.++++||++.+ .+.++||+ +|.+++.++++|||+|++.. ++|.|.. ..+.++|....++.-.
T Consensus 209 eAq~~aA~~fgA~~t-----~FlvNGST~gn~a~i~a~~~~gd~Vlv~R---N~HKSv~-----~al~L~ga~Pvyl~P~ 275 (755)
T PRK15029 209 ESEKYAARVFGADRS-----WSVVVGTSGSNRTIMQACMTDNDVVVVDR---NCHKSIE-----QGLILTGAKPVYMVPS 275 (755)
T ss_pred HHHHHHHHHhCCCcE-----EEEeCChhHHHHHHHHHhcCCCCEEEeec---ccHHHHH-----HHHHHcCCeEEEeccc
Confidence 367778999999984 44566665 99999999999999999865 5776632 2456777643333222
Q ss_pred ecCCCC---CCC-----HHHHHHHhhhcC-Ce--------EEEE-cCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccc
Q 018300 231 LDESTG---LVD-----YDMLEKTAILFR-PK--------LIIA-GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGL 292 (358)
Q Consensus 231 ~~~~~~---~iD-----~d~le~~i~~~~-~k--------lIi~-~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl 292 (358)
.+ +.+ .++ ++.+++.+..+. +| ++++ +++.+|...|+++|+++|+++|++|++|+||...+
T Consensus 276 ~~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 276 RN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred cc-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 22 232 355 889988885532 23 5555 55567999999999999999999999999999877
Q ss_pred cccCCcc--CCC-------CCCc-EEEEcCcCcCccC-cEEEEEEeCC
Q 018300 293 VAASVVA--DPF-------KYCD-VVTTTTHKSLRGP-RGGMIFFKKD 329 (358)
Q Consensus 293 ~~~g~~~--~pl-------~gaD-iv~~S~hK~L~Gp-~GG~I~~~~~ 329 (358)
.+.+.+| +++ .|+| +++.|+||+|++. ++.+|..+.+
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 6655554 444 3788 9999999999887 4578877654
No 164
>PLN02822 serine palmitoyltransferase
Probab=99.61 E-value=3.5e-14 Score=144.91 Aligned_cols=189 Identities=16% Similarity=0.182 Sum_probs=128.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~-~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.+|.+.+++...+. +|..|+.+.|.+.|+ +...+ ++++++++++.+. .|++++|..++..++.++.++|
T Consensus 124 ~~~~i~ea~~~al~-~~G~g~~g~r~~yg~~~~~~~----Lee~La~~~~~~~-----~i~~s~G~~a~~sai~a~~~~g 193 (481)
T PLN02822 124 GNEKIKESCTSALE-KYGVGSCGPRGFYGTIDVHLD----CETKIAKFLGTPD-----SILYSYGLSTIFSVIPAFCKKG 193 (481)
T ss_pred CCHHHHHHHHHHHH-HhCCCCcccCccccCHHHHHH----HHHHHHHHhCCCC-----EEEECCHHHHHHHHHHHhCCCC
Confidence 58999999988765 454577776654444 32333 4566899999765 3667788889999999999999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh--------cCC-eEEEEcC--CC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--------FRP-KLIIAGA--SA 261 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~--------~~~-klIi~~~--s~ 261 (358)
|.|+.....|. +.. ..+.+.+. +++.++.+ |.++++..+++ .++ ++|+++. ++
T Consensus 194 d~Ii~d~~~H~---s~~-----~~~~ls~~--~~~~~~~n------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~ 257 (481)
T PLN02822 194 DIIVADEGVHW---GIQ-----NGLYLSRS--TIVYFKHN------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQN 257 (481)
T ss_pred CEEEEeCCccH---HHH-----HHHHHcCC--eEEEECCC------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCC
Confidence 99997654332 211 13344554 34444433 34444443321 124 6777754 34
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecccccccccc-C--Ccc-CCC--CCCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VVA-DPF--KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g--~~~-~pl--~gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
.|...|+++|+++|++||+++++|++|+.|.... | ... ..+ +..|++++|++|+++ ..||+++++++
T Consensus 258 ~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg-~~GG~i~g~~~ 330 (481)
T PLN02822 258 SGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA-TEGGFCTGSAR 330 (481)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-hCCeEEEcCHH
Confidence 6788999999999999999999999999886531 1 110 112 257899999999984 66799998873
No 165
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.60 E-value=2.6e-15 Score=143.51 Aligned_cols=194 Identities=21% Similarity=0.255 Sum_probs=131.7
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
-|+| ++|+++++|..... |.. -|++.+++.++|+ +++++||.+.. +++.|||.||..++.++
T Consensus 3 ~SD~-~~~~m~~a~~~a~~-----gd~---~Yg~D~~~~~l~~----~i~~l~g~e~a-----~f~~sGT~An~~al~~~ 64 (290)
T PF01212_consen 3 RSDT-PTPAMLEAMAAANV-----GDD---AYGEDPTTARLEE----RIAELFGKEAA-----LFVPSGTMANQLALRAH 64 (290)
T ss_dssp S-SS-S-HHEEHHHHHTTS-----B-C---CTTSSHHHHHHHH----HHHHHHTSSEE-----EEESSHHHHHHHHHHHH
T ss_pred CccC-CCHHHHHHHHcccc-----CCc---ccCCChhHHHHHH----HHHHHcCCCEE-----EEeCCCChHHHHHHHHH
Confidence 3677 88999999955322 222 2667777777665 47889999873 67789999999999999
Q ss_pred ccCCCEEEecCCCCCcccccccccchhcc-ccCCceEEEEeceecCCCCCCCHHHHHHHhhh-----cCCeEEEEcCCC-
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-----FRPKLIIAGASA- 261 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~-----~~~klIi~~~s~- 261 (358)
++|++.|++.+. +|+.. .....+ .+.|. ++++++.+ +.+.+|+++|++.+.. .+|++|.++.++
T Consensus 65 ~~~~~~vi~~~~---aHi~~---~E~ga~~~~~G~--~~~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~ 135 (290)
T PF01212_consen 65 LRPGESVICADT---AHIHF---DETGAIEELSGA--KLIPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTE 135 (290)
T ss_dssp HHTTEEEEEETT---EHHHH---SSTTHHHHHTTC--EEEEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBT
T ss_pred HhcCCceecccc---ceeee---eccchhhHhcCc--EEEECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCc
Confidence 999999999764 55421 111222 35665 44554443 2289999999999876 346888886554
Q ss_pred C--CCCCC---HHHHHHHHHHcCCEEEEeccccccccc-cCCccCCC-CCCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 262 Y--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 262 ~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~-~g~~~~pl-~gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
. |+..+ +++|.++||++|++|+.|+|-...... .+..+..+ .++|++++|++|.+..|-|++|+++++
T Consensus 136 ~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~ 210 (290)
T PF01212_consen 136 LAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKE 210 (290)
T ss_dssp TTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHH
T ss_pred CCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechH
Confidence 4 66654 667788999999999999985432211 11111111 289999999999999999999999986
No 166
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.60 E-value=3.7e-14 Score=141.10 Aligned_cols=203 Identities=25% Similarity=0.279 Sum_probs=135.6
Q ss_pred cccccCCCC----cHHHHHHHhhhhhcccCCCCCCCcCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 106 ELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 106 ~lias~n~~----s~~V~~al~~~l~~~~~~G~pg~r~~~G-~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
....|++|. +|.|++++...+. +|..|..++|...| .+...++ ++++++++|.+. .+.++||+.|
T Consensus 48 ~~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~L----e~~la~~~g~~~-----~l~~~sG~~a 117 (402)
T TIGR01821 48 TVWCSNDYLGMGQHPEVLQAMHETLD-KYGAGAGGTRNISGTNIPHVEL----EAELADLHGKES-----ALVFTSGYVA 117 (402)
T ss_pred EEeEccCcCCCCCCHHHHHHHHHHHH-HcCCCCcchhhhhCCcHHHHHH----HHHHHHHhCCCe-----EEEECchHHH
Confidence 345788885 8899999987764 45455555554434 3333444 455889999654 4778999999
Q ss_pred HHHHHHHhcc--CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---cCCeEE
Q 018300 181 NFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLI 255 (358)
Q Consensus 181 ~~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---~~~klI 255 (358)
|..++..+.+ +||.|+.....|++... .+...+..+ ..++ ..|++++++.++. .++++|
T Consensus 118 n~~ai~~l~~~~~~~~v~~~~~~h~s~~~--------~~~~~g~~~--~~~~------~~d~~~l~~~l~~~~~~~~~~v 181 (402)
T TIGR01821 118 NDATLATLAKIIPGCVIFSDELNHASMIE--------GIRHSGAEK--FIFR------HNDVAHLEKLLQSVDPNRPKII 181 (402)
T ss_pred HHHHHHHhhCCCCCCEEEEcchHhHHHHH--------HHHHcCCeE--EEEC------CCCHHHHHHHHHhccCCCCeEE
Confidence 9999988754 78888776554433211 223344422 2221 2477888877753 256888
Q ss_pred EEcCCC--CCCCCCHHHHHHHHHHcCCEEEEecccccccccc---CCcc-CCC-CCCcEEEEcCcCcCccCcEEEEEEeC
Q 018300 256 IAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 256 i~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~---g~~~-~pl-~gaDiv~~S~hK~L~Gp~GG~I~~~~ 328 (358)
+++.++ .|...|+++|.++|+++|+++++|++|+.|+... +... ..+ +..|+++.|++|+|++ .||++++++
T Consensus 182 ~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~GG~i~~~~ 260 (402)
T TIGR01821 182 AFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGV-VGGYIAASR 260 (402)
T ss_pred EEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhcc-CCceeecCH
Confidence 887544 4678899999999999999999999999886432 1111 111 1468999999999854 568888776
Q ss_pred CCCchhHHHHHHh
Q 018300 329 DPVLGVELESAIN 341 (358)
Q Consensus 329 ~~~~~~~~~~~i~ 341 (358)
++.+.+.
T Consensus 261 ------~~~~~l~ 267 (402)
T TIGR01821 261 ------KLIDAIR 267 (402)
T ss_pred ------HHHHHHH
Confidence 4555554
No 167
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.60 E-value=1.3e-13 Score=136.94 Aligned_cols=224 Identities=16% Similarity=0.150 Sum_probs=142.7
Q ss_pred ccccChHHHHHHHHHHHHh-----hhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHH
Q 018300 83 LGEADPEVCEIITKEKERQ-----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (358)
Q Consensus 83 l~~~d~~~~~~i~~e~~~~-----~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~ 155 (358)
+..+.+.++..+.+..... +..++|-.+++ .+++.+++++...+... ..|+. ..|.+ ++.+.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~~---~~G~~---~lr~~ia~ 76 (396)
T PRK09147 5 LDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYPT---TAGLP---ALREAIAA 76 (396)
T ss_pred hhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCCC---CCCCH---HHHHHHHH
Confidence 4445555555444444322 24444443333 45788888887655321 23433 22333 46666677
Q ss_pred HHHHHcCCC---CCCCcceEEeCCCH-HHHHHHHHHhccC---CCEEEecCCCCCcccccccccchhccccCCceEEEEe
Q 018300 156 RALAAFNLD---ENKWGVNVQPLSGS-PANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (358)
Q Consensus 156 ~la~lfg~~---~~~~~v~V~~~SGt-~A~~~a~~all~p---GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~ 228 (358)
++.+.+|.+ ++ -+|.+++|+ +|+..++.++++| ||+|++++|.+.++.. .....|. ++++
T Consensus 77 ~~~~~~g~~~~~~~---~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~ 143 (396)
T PRK09147 77 WLERRYGLPALDPA---TQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG--------AALLAGA--EPYF 143 (396)
T ss_pred HHHHHhCCCcCCcc---ceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH--------HHHhcCC--EEEE
Confidence 777777854 32 146666765 5999999999999 9999999886655421 2234565 4555
Q ss_pred ceecCCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCCcc--C
Q 018300 229 YRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--D 300 (358)
Q Consensus 229 ~~~~~~~-~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~ 300 (358)
+++++++ ..+|++++++.+.. ++|+|++..++||+ .. ++++|.++|++++++|++|+++. .+.+.+..+ .
T Consensus 144 vp~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~ 221 (396)
T PRK09147 144 LNCDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYS-EIYFDEAAPPLG 221 (396)
T ss_pred eccCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccc-ccccCCCCCCch
Confidence 5566443 37999999887653 78988887667664 44 47788899999999999999976 333333111 1
Q ss_pred CC----C-CC---c--EEEEcCcCc--CccCcEEEEEEeCC
Q 018300 301 PF----K-YC---D--VVTTTTHKS--LRGPRGGMIFFKKD 329 (358)
Q Consensus 301 pl----~-ga---D--iv~~S~hK~--L~Gp~GG~I~~~~~ 329 (358)
.+ . +. | +++.|++|. ++|.|.|+++++++
T Consensus 222 ~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~ 262 (396)
T PRK09147 222 LLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAA 262 (396)
T ss_pred hhhhccccCccccccEEEEeccccccCCccceeeeecCCHH
Confidence 11 0 11 2 788999995 57889999998763
No 168
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.59 E-value=6.4e-14 Score=139.76 Aligned_cols=196 Identities=20% Similarity=0.225 Sum_probs=132.8
Q ss_pred cccccCCCC----cHHHHHHHhhhhhcccCCCCCCCcCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 106 ELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 106 ~lias~n~~----s~~V~~al~~~l~~~~~~G~pg~r~~~G-~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
....+++|. +|.|++++...+. ++..+..+.|...| .+...++ ++++++++|.+. .++++||+.|
T Consensus 48 ~~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~l----e~~la~~~g~~~-----~~~~~SG~~A 117 (406)
T PRK13393 48 TVWCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLL----EAELADLHGKEA-----ALLFTSGYVS 117 (406)
T ss_pred EEeecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHH----HHHHHHHhCCCc-----EEEeCCcHHH
Confidence 345788885 8899999988765 45444444554334 3333344 456889999754 4778999999
Q ss_pred HHHHHHHhcc--CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---cCCeEE
Q 018300 181 NFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLI 255 (358)
Q Consensus 181 ~~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---~~~klI 255 (358)
|..++.++.+ +||.|+..+..|++.+. .+...+..+ ..++ ..|++++++.+.. .++++|
T Consensus 118 n~~ai~~l~~~~~g~~I~~~~~~H~s~~~--------~~~~~g~~~--~~~~------~~d~~~l~~~l~~~~~~~~~~v 181 (406)
T PRK13393 118 NWAALSTLGSRLPGCVILSDELNHASMIE--------GIRHSRAEK--RIFR------HNDPADLERKLSDLDPHRPKLV 181 (406)
T ss_pred HHHHHHHhhcCCCCCEEEEccchhHHHHH--------HHHHcCCeE--EEeC------CCCHHHHHHHHHhccCCCCEEE
Confidence 9999998755 88888877766654321 223344422 2222 2477778777653 246788
Q ss_pred EEcCCC--CCCCCCHHHHHHHHHHcCCEEEEecccccccccc-CC--cc-CCCC-CCcEEEEcCcCcCccCcEEEEEEeC
Q 018300 256 IAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA-DPFK-YCDVVTTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 256 i~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~--~~-~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~ 328 (358)
+++... .|...|+++|.++|+++|+++++|++|+.|+... |. .. ..+. ..|+++.|+.|.++. .||++++++
T Consensus 182 ~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~GG~~~~~~ 260 (406)
T PRK13393 182 AFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MGGYITGSA 260 (406)
T ss_pred EEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cCceeeCCH
Confidence 776543 5678899999999999999999999999887532 11 10 1111 468898999999864 578888766
No 169
>PRK07049 methionine gamma-lyase; Validated
Probab=99.59 E-value=3.9e-14 Score=142.48 Aligned_cols=169 Identities=18% Similarity=0.191 Sum_probs=120.1
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCc
Q 018300 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 143 ~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
++....+|+ .+++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|+++..... ..+...|.
T Consensus 82 ~Pt~~~Le~----~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~----~~l~~~Gi 148 (427)
T PRK07049 82 HPNSEIVED----RLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLA----KTFRNFGV 148 (427)
T ss_pred CcCHHHHHH----HHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHhcCc
Confidence 444556665 4788998775 4678899999999999999999999999988877632100 01123354
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhh----hcCCeEEEEcCCCCC--CCCCHHHHHHHHHH------cCCEEEEeccccc
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAI----LFRPKLIIAGASAYP--RDFDYPRMRQIADA------VGALLMMDMAHIS 290 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~----~~~~klIi~~~s~~~--~~~dl~~I~~ia~e------~g~~livD~Ah~~ 290 (358)
+++.+. + ..|++++++.+. ..++|+|++..++|| ...|+++|.+++++ +++++++|++...
T Consensus 149 --~~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 149 --GAVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred --EEEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 334432 1 256777776653 246899999877776 47899999999988 8999999998442
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCcc---CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~G---p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.+ ...|++ ++|+++.|++|+++| .++|+++.++ ++.+++..
T Consensus 222 ~~-----~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~------~l~~~l~~ 266 (427)
T PRK07049 222 PV-----FQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK------ALIRQVRA 266 (427)
T ss_pred cc-----cCCccccCCCEEEEcCceeecCCCCcEEEEEECCH------HHHHHHHH
Confidence 21 234566 899999999999975 4689998776 45555543
No 170
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.59 E-value=1.9e-14 Score=138.06 Aligned_cols=200 Identities=20% Similarity=0.295 Sum_probs=116.0
Q ss_pred HHHHHHhhhhh----cccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 117 AVMEAVGSCLT----NKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 117 ~V~~al~~~l~----~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.|++|+...=. -..+.||.+ +..-.|.+|+. +++.||++.+- |..++.|||.|+..++.++++||
T Consensus 28 KVL~Af~~~~vs~~hf~~tTGYGY-----~D~GRd~le~i----yA~vfgaE~AL--VRpq~vSGTHAi~~~Lfg~LrpG 96 (403)
T PF06838_consen 28 KVLKAFQENRVSDSHFAGTTGYGY-----DDIGRDKLERI----YADVFGAEDAL--VRPQFVSGTHAIALALFGVLRPG 96 (403)
T ss_dssp HHHHHHHHTT--GGGCS---TT-T-----T-HHHHHHHHH----HHHHCT-SEEE--EETTS-SHHHHHHHHHHHH--TT
T ss_pred HHHHHHHHcCCChhhcCCCCcCCC-----CCccHHHHHHH----HHHHhCchhhh--hcccccchHHHHHHHHHhcCCCC
Confidence 67888754311 122344432 33345667764 78999999852 23345699999999999999999
Q ss_pred CEEEecCC-CC---------CcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 193 DRIMGLDL-PH---------GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 193 D~Vl~~~~-~~---------ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
|+++...- +| .++ ..+ .+.-.|..++ .+++. +++.+|++.+++.++ .++|+|.+.-|-
T Consensus 97 D~ll~~tG~PYDTL~~VIG~~g~-~~G------SL~e~Gi~Y~--~v~L~-~dg~~D~~~i~~~~~-~~tk~v~IQRSrG 165 (403)
T PF06838_consen 97 DELLSITGKPYDTLEEVIGIRGN-GPG------SLKEFGIKYR--EVPLT-EDGTIDWEAIKKALK-PNTKMVLIQRSRG 165 (403)
T ss_dssp -EEEESSSS--CCHHHHHTSSSS-SSS------STGGGT-EEE--E--B--TTSSB-HHHHHHHHH-TTEEEEEEE-S-T
T ss_pred CeEEEcCCCchhhHHHHhCCCCC-CCC------ChHHhCceeE--EEeec-CCCCcCHHHHHHhhc-cCceEEEEecCCC
Confidence 99997541 11 111 111 1223455444 44465 358999999999987 478999986543
Q ss_pred CCC-----CCCHHHHHHHHHHc--CCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCcc---CcEEEEEEeCCC
Q 018300 262 YPR-----DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDP 330 (358)
Q Consensus 262 ~~~-----~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~G---p~GG~I~~~~~~ 330 (358)
|.. +.+++++++++|+. +++++||+|+. .++- ...|.+ |||++.+|+-|+.+| |.||+|++++
T Consensus 166 Ys~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG-EFvE---~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~-- 239 (403)
T PF06838_consen 166 YSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYG-EFVE---TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK-- 239 (403)
T ss_dssp TSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTT-TTTS---SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH--
T ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc-eecc---ccCccccchhheeccceeCCCCCccCcCCEEechH--
Confidence 432 23455666666665 78999999954 2221 124556 999999999999865 7899999998
Q ss_pred CchhHHHHHHhh-ccCCcc
Q 018300 331 VLGVELESAINN-AVFPGL 348 (358)
Q Consensus 331 ~~~~~~~~~i~~-~~f~g~ 348 (358)
++-++... ..-||+
T Consensus 240 ----~lVe~~a~RLTaPGi 254 (403)
T PF06838_consen 240 ----DLVERAAYRLTAPGI 254 (403)
T ss_dssp ----HHHHHHHHHHS-TTT
T ss_pred ----HHHHHHHhhhcCCcc
Confidence 45555443 344554
No 171
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.59 E-value=1.9e-13 Score=135.28 Aligned_cols=226 Identities=16% Similarity=0.114 Sum_probs=140.4
Q ss_pred cccccccChHHHHHHHHHHHH----hhhcccccccC--CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKER----QFKSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~----~~~~i~lias~--n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~ 153 (358)
++++...++..+..+.+...+ ...-+++-..+ ..+++.+.+++...+.+.. ..|+.. .| ...+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~g---~~~lr~~i 77 (393)
T PRK05764 5 SKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGK-TKYTPA---AG---IPELREAI 77 (393)
T ss_pred hhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCCC---CC---hHHHHHHH
Confidence 455555556554333322221 12333443222 2346888888877665422 223321 12 23566666
Q ss_pred HHHHHHHcCC--CCCCCcceEEeCC-CHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 154 QKRALAAFNL--DENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 154 ~~~la~lfg~--~~~~~~v~V~~~S-Gt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
.+++.+.+|. +++ ++.+++ +++|+..++.+++++||+|+++++.|.++.. .+...|. ++.+++
T Consensus 78 a~~~~~~~~~~~~~~----~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~ 143 (393)
T PRK05764 78 AAKLKRDNGLDYDPS----QVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGG--VPVFVP 143 (393)
T ss_pred HHHHHHHhCCCCCHH----HEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCC--EEEEEe
Confidence 6666665554 332 344555 4679999999999999999999987665421 2234565 445555
Q ss_pred ecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCC---CHHHHHHHHHHcCCEEEEeccccccccccCCc-cC--C
Q 018300 231 LDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD--P 301 (358)
Q Consensus 231 ~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~~--p 301 (358)
.+++ +..+|++++++.++. ++++|++..+++| ... ++++|.++|+++|+++++|++|. .+...+.. +. .
T Consensus 144 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~ 221 (393)
T PRK05764 144 TGEENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE-KLVYDGAEFTSIAS 221 (393)
T ss_pred cCcccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc-ceeeCCCCcccHHH
Confidence 5533 347899999998753 6788877666654 343 48899999999999999999976 33332221 11 1
Q ss_pred C--C--CCcEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 302 F--K--YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 302 l--~--gaDiv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
+ + +.++++.|++|++ +|.|.|+++.++
T Consensus 222 ~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~ 254 (393)
T PRK05764 222 LSPELRDRTITVNGFSKAYAMTGWRLGYAAGPK 254 (393)
T ss_pred cCCCCcCCEEEEecCcccccCccceeEEEecCH
Confidence 1 2 3568899999986 566779999776
No 172
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.59 E-value=6.8e-14 Score=139.40 Aligned_cols=196 Identities=24% Similarity=0.276 Sum_probs=129.7
Q ss_pred cccccCCCC----cHHHHHHHhhhhhcccCCCCCCCcCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 106 ELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 106 ~lias~n~~----s~~V~~al~~~l~~~~~~G~pg~r~~~G-~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
....+++|. +|.|++++...+. ++..+..++|.+.| .+...++| +.+++++|.+. .++++||+.|
T Consensus 49 ~~~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~~a 118 (407)
T PRK09064 49 TVWCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGYVS 118 (407)
T ss_pred EEEECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHHHH
Confidence 345788775 8899999987664 45444444554333 44444444 45788998643 4778999999
Q ss_pred HHHHHHHhcc--CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---cCCeEE
Q 018300 181 NFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLI 255 (358)
Q Consensus 181 ~~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---~~~klI 255 (358)
|..++..+.. +++.|+.....|++... .+...+..+ ..++ ..|+++++++++. .++++|
T Consensus 119 n~~ai~~l~~~~~~~~i~~~~~~h~s~~~--------~~~~~~~~~--~~~~------~~d~~~le~~l~~~~~~~~~~v 182 (407)
T PRK09064 119 NDATLSTLAKLIPDCVIFSDELNHASMIE--------GIRRSRCEK--HIFR------HNDVAHLEELLAAADPDRPKLI 182 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEeCcchHHHHH--------HHHHcCCcE--EEEC------CCCHHHHHHHHHhccCCCCeEE
Confidence 9999887754 78777766544432211 222334322 2222 2477888887753 357888
Q ss_pred EEcCCC--CCCCCCHHHHHHHHHHcCCEEEEecccccccccc-CC-cc--CCC-CCCcEEEEcCcCcCccCcEEEEEEeC
Q 018300 256 IAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VA--DPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 256 i~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~-~~--~pl-~gaDiv~~S~hK~L~Gp~GG~I~~~~ 328 (358)
++.... .|...|+++|.++|+++|++|++|++|+.|+... |. .. ..+ +..|+++.|++|.| |..||++++++
T Consensus 183 ~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~~~ 261 (407)
T PRK09064 183 AFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGSA 261 (407)
T ss_pred EEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEecCH
Confidence 886544 3567899999999999999999999999775421 11 11 112 24689999999987 45679988876
No 173
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.59 E-value=2.8e-14 Score=138.73 Aligned_cols=196 Identities=17% Similarity=0.125 Sum_probs=130.3
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhcc
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILK 190 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~ 190 (358)
..+++.+++++....... .+|+. .. ..+ .|+.++++++++++ +|.+++|+ +++..++.++++
T Consensus 31 ~~~~~~~~~a~~~~~~~~--~~y~~------~~-~~~----lr~~ia~~~~~~~~----~i~~~~G~~~~l~~~~~~l~~ 93 (346)
T TIGR01141 31 FGPPPKAKEALRAEADKL--HRYPD------PD-PAE----LKQALADYYGVDPE----QILLGNGSDEIIELLIRAFLE 93 (346)
T ss_pred CCCCHHHHHHHHHhHHHh--hcCCC------CC-HHH----HHHHHHHHhCcChH----HEEEcCCHHHHHHHHHHHhcC
Confidence 346888999998764322 12322 11 123 45557889998764 45566665 588888888999
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCH
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDY 268 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl 268 (358)
+||+|+++++.|..+. ......|. ++..+++++ ++.+|++++++.+. .++++|++..+++ |...+.
T Consensus 94 ~gd~v~~~~p~y~~~~--------~~~~~~g~--~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~ 161 (346)
T TIGR01141 94 PGDAVLVPPPTYSMYE--------ISAKIHGA--EVVKVPLDE-DGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSR 161 (346)
T ss_pred CCCEEEEcCCCHHHHH--------HHHHHcCC--eEEEeccCC-CCCCCHHHHHHhcC-CCCCEEEEeCCCCCCCCCCCH
Confidence 9999999987554321 12234465 445555654 46799999999764 3788888765555 458899
Q ss_pred HHHHHHHHHc--CCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 269 PRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 269 ~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+++.++|+.+ |+++++|++|. ++...+.....+. ..++++.|++|++ +|+|.|+++.++ ++.+++..
T Consensus 162 ~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~------~~~~~~~~ 234 (346)
T TIGR01141 162 SDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA------EIIDALNK 234 (346)
T ss_pred HHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH------HHHHHHHh
Confidence 9999999987 99999999987 3332211111111 2347788999998 466779999876 56666654
Q ss_pred c
Q 018300 343 A 343 (358)
Q Consensus 343 ~ 343 (358)
.
T Consensus 235 ~ 235 (346)
T TIGR01141 235 V 235 (346)
T ss_pred c
Confidence 3
No 174
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.58 E-value=3e-13 Score=134.82 Aligned_cols=231 Identities=17% Similarity=0.138 Sum_probs=139.9
Q ss_pred ccccccChHHHHHHHHHHH---Hh-hhcccccc--cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKE---RQ-FKSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~---~~-~~~i~lia--s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~ 154 (358)
+++....++.+..+.+... +. ..-++|-. ++..+++.+++++...+......+|+. ..|.. .+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lR~~ia 81 (403)
T PRK08636 8 NKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSV---SKGIY---KLRLAIC 81 (403)
T ss_pred HHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCC---CCCCH---HHHHHHH
Confidence 3455556655544433322 11 23344432 222346667777665443222234443 23443 5666677
Q ss_pred HHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC
Q 018300 155 KRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (358)
Q Consensus 155 ~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (358)
+++.+.+|.+.. ..-+|.+++|+. |+..++.++++|||+|++.+|.|.++.. .+...|. ++++++++.
T Consensus 82 ~~l~~~~~~~~~-~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~ 150 (403)
T PRK08636 82 NWYKRKYNVDLD-PETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQ--------AFILAGG--NVHKMPLEY 150 (403)
T ss_pred HHHHHHhCCCCC-CCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEeccc
Confidence 777777785421 101466777765 9999999999999999999987766432 2345565 444544532
Q ss_pred -CCCCCCHHHH----HHHhhh--cCCeEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCC-ccC
Q 018300 234 -STGLVDYDML----EKTAIL--FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD 300 (358)
Q Consensus 234 -~~~~iD~d~l----e~~i~~--~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~ 300 (358)
++..+|.+++ ++.++. .++++|++..++||+ ..+ +++|.++|+++++++++|.++. .+.+.+. .+.
T Consensus 151 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~-~l~~~~~~~~~ 229 (403)
T PRK08636 151 NEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYA-DITFDGYKTPS 229 (403)
T ss_pred cccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccch-hhccCCCCCCC
Confidence 2357887754 555543 357788777666653 444 6788899999999999999865 4443332 111
Q ss_pred --CCCC-Cc--EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 301 --PFKY-CD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 301 --pl~g-aD--iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.++. .| +++.|++|++ +|.|.|+++.+++
T Consensus 230 ~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~ 265 (403)
T PRK08636 230 ILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKK 265 (403)
T ss_pred hhcCCCccccEEEEEecccccCCccceeeeeeCCHH
Confidence 1222 23 4578999997 7889999998764
No 175
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.58 E-value=8.9e-15 Score=143.63 Aligned_cols=196 Identities=14% Similarity=0.128 Sum_probs=121.3
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCc-CCCC---cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCCHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGG---NEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSP 179 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r-~~~G---~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~-~SGt~ 179 (358)
+++.|++..+|+.|++++...+.+ +. ++++. |..+ .++.+.+++ +|+.++++||++.+ . ..+++ .|||.
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~~-~r~~l~~l~~~~~~-~-~vvf~~gs~T~ 74 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVNE-AESDLRELLNIPDN-Y-KVLFLQGGATG 74 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHHH-HHHHHHHHhCCCCC-c-eEEEEcCCchH
Confidence 468899999999999999988754 21 23321 2222 455566665 89999999998432 2 12333 45889
Q ss_pred HHHHHHHHhcc---CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCH-HHHHHHhhhcCCeEE
Q 018300 180 ANFEVYTAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY-DMLEKTAILFRPKLI 255 (358)
Q Consensus 180 A~~~a~~all~---pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~-d~le~~i~~~~~klI 255 (358)
|+.+++.++++ +||+|++ |.+.+.+. +..+..|..++.+. .+++....+. +..+..+. .++|+|
T Consensus 75 a~~~~~~~l~~~~~~~~~i~~------g~~~~~~~---~~a~~~g~~~~~~~--~~~~g~~~~~~~~~~~~~~-~~~~lV 142 (355)
T cd00611 75 QFAAVPLNLLGDKGTADYVVT------GAWSAKAA---KEAKRYGGVVVIVA--AKEEGKYTKIPDVETWDLA-PDAAYV 142 (355)
T ss_pred HHHHHHHhcCCCCCeEEEEEC------CHHHHHHH---HHHHhcCCCcEEEe--cccccCCCCCCCHhhcCCC-CCCCEE
Confidence 99999999987 5566654 22222211 11233455455554 3321112232 22222233 468888
Q ss_pred EEcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 256 IAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 256 i~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.+.+.. +|.. + .++++.+|+++++|++|++|.. |..++..|++++|.||+| ||.| |+++.+++
T Consensus 143 ~~~h~~t~tG~~--~---~~i~~~~g~~~~VDa~qs~g~~-----~idv~~~~~~~ss~~K~l-GP~G~g~l~~~~~ 208 (355)
T cd00611 143 HYCSNETIHGVE--F---DEVPDTGGVPLVADMSSNILSR-----PIDVSKFGVIYAGAQKNL-GPAGVTVVIVRKD 208 (355)
T ss_pred EEeCCcccccEE--c---ceecccCCCeEEEEccccccCC-----CCCHHHhCEEEeeccccc-CCCceEEEEECHH
Confidence 775544 3443 2 2456669999999999998864 223335567778899976 7998 88888874
No 176
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.58 E-value=1.9e-13 Score=137.63 Aligned_cols=196 Identities=14% Similarity=0.035 Sum_probs=128.3
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHhcc
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILK 190 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~ 190 (358)
..+++.+.+++...+......+|+. ..|.+ ++++.+.+++....|.+.+ . -+|++++| ++|+..++.++++
T Consensus 68 ~~~~~~~~~a~~~al~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~~~~~~-~-~~v~it~G~~~al~l~~~~l~~ 139 (430)
T PLN00145 68 FRTAPEAEDAVAAALRSGKYNSYST---CVGLL---PARRAIAEYLSRDLPYELS-T-DDIYLTAGCAQAIEIIMSVLAQ 139 (430)
T ss_pred CCCCHHHHHHHHHHHHcCcCCCCCC---CccCH---HHHHHHHHHHhhccCCCCC-h-hhEEEeCCHHHHHHHHHHHhcC
Confidence 4568899999988776533334443 12332 4555555555444444321 1 14555655 5699999999999
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d 267 (358)
|||+|+++++.|..+.. ...+.|.. +..+++.++ +..+|++++++.++. ++++|++..++|| ...+
T Consensus 140 ~Gd~Vlv~~P~y~~y~~--------~~~~~g~~--~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~P~NPtG~v~~ 208 (430)
T PLN00145 140 PGANILLPRPGYPLYEA--------RAVFSGLE--VRHFDLLPERGWEVDLEGVEALADE-NTVAMVIINPNNPCGSVYS 208 (430)
T ss_pred CCCEEEEcCCCCccHHH--------HHHHcCCE--EEEeeCCcccCCcCCHHHHHHHhCc-CceEEEEeCCCCCCCCCCC
Confidence 99999999986654322 22345654 444444433 457999999998764 6777777666665 4555
Q ss_pred ---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCC--cEEEEcCcCc--CccCcEEEEEEe
Q 018300 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYC--DVVTTTTHKS--LRGPRGGMIFFK 327 (358)
Q Consensus 268 ---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~ga--Div~~S~hK~--L~Gp~GG~I~~~ 327 (358)
+++|+++|+++|++|++|+++. .+.+.+....++ +.. =+++.|++|. ++|+|-|+++..
T Consensus 209 ~~~l~~i~~~a~~~~i~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~ 277 (430)
T PLN00145 209 YEHLAKIAETARKLGILVIADEVYD-HLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATC 277 (430)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccch-hhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEe
Confidence 7888899999999999999965 444433211222 221 2778899999 488899999974
No 177
>PRK07683 aminotransferase A; Validated
Probab=99.58 E-value=1.5e-13 Score=136.19 Aligned_cols=194 Identities=15% Similarity=0.128 Sum_probs=130.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCC-HHHHHHHHHHhc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG-SPANFEVYTAIL 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SG-t~A~~~a~~all 189 (358)
..++.+.+++...+.+.. .+|+. ..|. .++++.+.+++.+.+|. +++ .+|.+++| ++|+..++.+++
T Consensus 41 ~~~~~~~~a~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia~~l~~~~g~~~~~~---~~I~~t~G~~~al~~~~~~l~ 110 (387)
T PRK07683 41 PTPSHVKEAAKRAITENY-TSYTH---NAGL---LELRKAACNFVKDKYDLHYSPE---SEIIVTIGASEAIDIAFRTIL 110 (387)
T ss_pred CCCHHHHHHHHHHHhcCC-CCCCC---CCCC---HHHHHHHHHHHHHHhCCCCCCC---CcEEEeCChHHHHHHHHHHhC
Confidence 346788888887766432 23432 1233 35666666666655565 332 13555655 669999999999
Q ss_pred cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CC-
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF- 266 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~- 266 (358)
++||+|+++++.+.++.. .+...|. ++++++.++++..+|.+++++.+.. ++|+|++..+++|+ ..
T Consensus 111 ~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s 179 (387)
T PRK07683 111 EPGTEVILPAPIYPGYEP--------IIRLCGA--KPVFIDTRSTGFRLTAEALENAITE-KTRCVVLPYPSNPTGVTLS 179 (387)
T ss_pred CCCCEEEEcCCCccchHH--------HHHHcCC--EEEEeecCcccCCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCC
Confidence 999999999886655321 2334565 4556666655557899999998764 68888877666653 33
Q ss_pred --CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC------CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 267 --DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 267 --dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~------gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
++++|.++|+++|+++++|+++.. +.+.+.. .++. +-.+++.|++|.+ +|.|.|+++++++
T Consensus 180 ~~~~~~l~~~~~~~~~~ii~De~y~~-~~~~~~~-~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~ 250 (387)
T PRK07683 180 KEELQDIADVLKDKNIFVLSDEIYSE-LVYEQPH-TSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSY 250 (387)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccccc-ceeCCCc-CChhhccCCcCCeEEEeeccccccCccceeEEEEcCHH
Confidence 478899999999999999999763 3333221 1221 2247789999997 5778899998874
No 178
>PRK10534 L-threonine aldolase; Provisional
Probab=99.58 E-value=4.1e-14 Score=136.96 Aligned_cols=192 Identities=18% Similarity=0.205 Sum_probs=123.5
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.+||.+++++....... .+ |+..+...++|+ .+++++|.++. +.+.+|+.++..++.++++||
T Consensus 11 ~p~~~~~~a~~~~~~~~-------~~-Y~~~~~~~~L~~----~la~~~g~~~~-----~v~~~g~~a~~~~l~~~~~~g 73 (333)
T PRK10534 11 RPSRAMLEAMMAAPVGD-------DV-YGDDPTVNALQD----YAAELSGKEAA-----LFLPTGTQANLVALLSHCERG 73 (333)
T ss_pred CCCHHHHHHHHhccCCC-------cc-cCCCHHHHHHHH----HHHHHhCCCeE-----EEeCchHHHHHHHHHHhcCCC
Confidence 47899999986533221 12 222333445554 47889999772 566788889999998899999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCCCCCCCC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPRDFD 267 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-----~~klIi~~~s~~~~~~d 267 (358)
|+|+++.+.|......+ .....+ ..+.++++++ +++.+|+++|++.+.+. ++++|++..+++|...+
T Consensus 74 d~vi~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~ 145 (333)
T PRK10534 74 EEYIVGQAAHNYLYEAG------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLP 145 (333)
T ss_pred CeeEEechhhhhHhcCC------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEecCCCCeecC
Confidence 99998765442111100 011222 1244555555 35789999999987542 57888887677788777
Q ss_pred HH---HHHHHHHHcCCEEEEecccccccccc-CCccCCC-CCCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 268 YP---RMRQIADAVGALLMMDMAHISGLVAA-SVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 268 l~---~I~~ia~e~g~~livD~Ah~~Gl~~~-g~~~~pl-~gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
.+ +|.++|+++|++|++|+||..+.... +.....+ .+.|.++.|++|.++.+.||+++++++
T Consensus 146 ~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~~ 212 (333)
T PRK10534 146 REYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRD 212 (333)
T ss_pred HHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCHH
Confidence 55 55678999999999999987432111 1111111 246766778999887776767877663
No 179
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.58 E-value=2e-14 Score=140.97 Aligned_cols=194 Identities=15% Similarity=0.114 Sum_probs=129.0
Q ss_pred CCcHHHHHHHhhhhhcccCCCCC-CCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~p-g~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~p 191 (358)
..|..|++++.+.+.+....|.. ........++.+.+++ +++.++++|+.+.+ +.+.+...|||.|+.+++.+++++
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~-~~~~l~~l~~~~~~-~~v~~~~gsgT~a~ea~~~nl~~~ 79 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANE-AESDLRELLNIPDN-YEVLFLQGGATGQFAAVPLNLLAE 79 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHH-HHHHHHHHhCCCCC-ceEEEEcCCchHHHHHHHHhcCCC
Confidence 46889999999887753322211 1123345666666666 79999999997432 224444456999999999999999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceec-CCCCCCCHHHHHHHhhhcCCeEEEEcC--CCCCCCCCH
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGA--SAYPRDFDY 268 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~iD~d~le~~i~~~~~klIi~~~--s~~~~~~dl 268 (358)
||++++.. .|.+++.+. +.....|. +..+..+-. +....+|+++++. + .++++|.+.+ +++|...+
T Consensus 80 ~~~~l~i~---~G~fg~r~~---~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~th~ETstGv~~~- 148 (349)
T TIGR01364 80 GKVADYIV---TGAWSKKAA---KEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S-EDAAYVHYCANETIHGVEFR- 148 (349)
T ss_pred CCeEEEEE---CCHHHHHHH---HHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C-CCCCEEEEcCCCCcccEecc-
Confidence 99988875 366665542 22344565 444442211 1223567776652 2 3678886654 34565544
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 269 ~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
++++.+++++++|+++++|.. |..++..|++++|.||+| ||.| |+++.+++
T Consensus 149 ----~l~~~~~~l~iVDavss~g~~-----~id~~~~d~~~~ssqK~l-gP~Glg~l~~s~~ 200 (349)
T TIGR01364 149 ----ELPDVKNAPLVADMSSNILSR-----PIDVSKFGLIYAGAQKNI-GPAGLTVVIVRKD 200 (349)
T ss_pred ----eecccCCCeEEEEccccccCc-----cCCHHHccEEEEeccccc-CCCceEEEEECHH
Confidence 677778999999999998864 233336789999999987 6998 88888774
No 180
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.58 E-value=1.3e-13 Score=135.92 Aligned_cols=195 Identities=17% Similarity=0.134 Sum_probs=125.4
Q ss_pred cccCCCC----cHHHHHHHhhhhhccc------CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC
Q 018300 108 IASENFT----SRAVMEAVGSCLTNKY------SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (358)
Q Consensus 108 ias~n~~----s~~V~~al~~~l~~~~------~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG 177 (358)
..|++|. ++.+.+++...+.... ..|..|+|...|.. +.+++ +++.+++++|++. .+.++||
T Consensus 9 ~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~--~~~~~-~e~~la~~~~~~~-----~l~~~sG 80 (370)
T PRK05937 9 FVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPS--SLLDD-LEHKIAHFHGAPE-----AFIVPSG 80 (370)
T ss_pred eECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCCh--HHHHH-HHHHHHHHhCCCe-----EEEECCh
Confidence 3677775 6667666665544321 13445556555533 22333 5667999999975 3778999
Q ss_pred HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhcccc-CCceEEEEeceecCCCCCCCHHHHHHHhhhc-----C
Q 018300 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG-TSIYFESMPYRLDESTGLVDYDMLEKTAILF-----R 251 (358)
Q Consensus 178 t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-----~ 251 (358)
+.||..+...+.++||.|+.....|++.+. .+.. .+. .+.+ ..+|++++++.++.. +
T Consensus 81 ~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~--------~~~~~~~~---~~~~------~~~d~~~l~~~l~~~~~~~~~ 143 (370)
T PRK05937 81 YMANLGLCAHLSSVTDYVLWDEQVHISVVY--------SLSVISGW---HQSF------RHNDLDHLESLLESCRQRSFG 143 (370)
T ss_pred HHHHHHHHHHhCCCCCEEEEEhhhhHHHHH--------HHHHcCCc---eEEe------cCCCHHHHHHHHHhhhccCCC
Confidence 999987777767889998887766654322 1112 222 1222 256899999988632 2
Q ss_pred CeEEEEcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCc----cCCCCCCcEEEEcCcCcCccCcEEEEE
Q 018300 252 PKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPFKYCDVVTTTTHKSLRGPRGGMIF 325 (358)
Q Consensus 252 ~klIi~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~----~~pl~gaDiv~~S~hK~L~Gp~GG~I~ 325 (358)
+++|++...+ .|...|+++|.++|+++|+++++|++|+.|....... ...++..++++.|++|.+ ||.|+.++
T Consensus 144 ~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl 222 (370)
T PRK05937 144 RIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALL 222 (370)
T ss_pred cEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEE
Confidence 3455554433 5778999999999999999999999999886532110 001112346678899975 67787777
Q ss_pred EeC
Q 018300 326 FKK 328 (358)
Q Consensus 326 ~~~ 328 (358)
+.+
T Consensus 223 ~~~ 225 (370)
T PRK05937 223 SSS 225 (370)
T ss_pred cCH
Confidence 765
No 181
>PRK08175 aminotransferase; Validated
Probab=99.58 E-value=4.8e-13 Score=132.93 Aligned_cols=196 Identities=18% Similarity=0.151 Sum_probs=125.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pG 192 (358)
.++.+.+++...+.+....+|+. ..|.+ ++++.+.+++.+.+|..-+ ...++.+++|+ +++..++.++++||
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~-~~~~i~~t~G~~~~l~~~~~~~~~~g 115 (395)
T PRK08175 43 TPPHIVEKLCEVAQRPDTHGYST---SRGIP---RLRRAISRWYQDRYDVDID-PESEAIVTIGSKEGLAHLMLATLDHG 115 (395)
T ss_pred CCHHHHHHHHHHHhCCCcCCCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCcEEEccCcHHHHHHHHHHhCCCC
Confidence 46667777766554332233432 22443 5666666777666665321 10146667776 58888888889999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh--cCCeEEEEcCCCCC--CCCCH
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYP--RDFDY 268 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~--~~~klIi~~~s~~~--~~~dl 268 (358)
|+|+++++.|..+.. .....|. ++.+++++++ ..+.+++++.++. .++|+|++..+++| ...+.
T Consensus 116 d~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~ 183 (395)
T PRK08175 116 DTVLVPNPSYPIHIY--------GAVIAGA--QVRSVPLVEG--VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVEL 183 (395)
T ss_pred CEEEEcCCCCcchHH--------HHHHcCC--eEEEEecccC--CCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCH
Confidence 999999886655421 1234555 4555556543 3357888887764 26788887755554 45665
Q ss_pred ---HHHHHHHHHcCCEEEEeccccccccccCCccCC---CCC-Cc--EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 269 ---PRMRQIADAVGALLMMDMAHISGLVAASVVADP---FKY-CD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 269 ---~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p---l~g-aD--iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
++|.++|+++|+++++|.++. .+...+..+.+ +++ .| +++.|++|.| +|.|.|+++.+++
T Consensus 184 ~~~~~i~~~a~~~~i~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~ 254 (395)
T PRK08175 184 EFFEKVVALAKRYDVLVVHDLAYA-DIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPE 254 (395)
T ss_pred HHHHHHHHHHHHcCcEEEEecchH-hhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHH
Confidence 788899999999999999975 44433322212 122 23 6689999997 5667899998763
No 182
>PLN02656 tyrosine transaminase
Probab=99.57 E-value=2.5e-13 Score=135.73 Aligned_cols=194 Identities=16% Similarity=0.028 Sum_probs=128.1
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCC-HHHHHHHHHHh
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG-SPANFEVYTAI 188 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SG-t~A~~~a~~al 188 (358)
..+++.+++++.+.+......+|.. ..|.+ ++++.+.+++...+|. +++ +|++++| ++|+..++.++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~g~~~~~~----~i~~t~G~~~al~~~~~~l 116 (409)
T PLN02656 47 FHTTHVAQEAVVDALQSNKFNGYAP---TVGLP---QARRAIAEYLSRDLPYKLSLD----DVFITSGCTQAIDVALSML 116 (409)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCCC---CCCCH---HHHHHHHHHHHHhcCCCCCcc----cEEEeCChHHHHHHHHHHH
Confidence 3568999999987766543334432 12333 4555555556555554 332 4555555 56999999999
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--C
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 265 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~ 265 (358)
++|||+|+++++.|..+.. .....|. ++..++++++ +..+|++++++.++. ++++|++..+++|+ .
T Consensus 117 ~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~ 185 (409)
T PLN02656 117 ARPGANILLPRPGFPIYEL--------CAAFRHL--EVRYVDLLPEKGWEVDLDAVEALADQ-NTVALVIINPGNPCGNV 185 (409)
T ss_pred hCCCCeEEEeCCCCCcHHH--------HHHHcCC--EEEEEeCCCcCCCCCCHHHHHHHhcc-CceEEEEECCCCCCCCC
Confidence 9999999999987654311 2234565 4444555433 347999999988754 56777665566654 3
Q ss_pred ---CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCC--cEEEEcCcCcC--ccCcEEEEEEe
Q 018300 266 ---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYC--DVVTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 266 ---~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~ga--Div~~S~hK~L--~Gp~GG~I~~~ 327 (358)
.++++|+++|+++|++|++|+++. ++.+.+....++ +.. =+++.|++|++ +|.|-|+++..
T Consensus 186 ~s~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~ 256 (409)
T PLN02656 186 YSYQHLKKIAETAEKLKILVIADEVYG-HLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTT 256 (409)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEehhhh-hcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEe
Confidence 368899999999999999999965 555443211222 211 26788999984 78899999984
No 183
>PLN02368 alanine transaminase
Probab=99.57 E-value=1.7e-13 Score=137.01 Aligned_cols=166 Identities=13% Similarity=0.071 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhc-cCCCEEEecCCCCCcccccccccchhccccCCceEE
Q 018300 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all-~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (358)
++++.+.+++.+.+|.+-+ . -+|++++|+. |+..++.+++ +|||+|++++|.|..+.. .+...|. +
T Consensus 111 ~LR~aia~~~~~~~g~~~~-~-~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~--------~~~~~g~--~ 178 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSD-P-ELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA--------TISLLGG--T 178 (407)
T ss_pred HHHHHHHHHHHHhcCCCCC-h-hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH--------HHHHcCC--E
Confidence 5666677777777775421 1 2566777765 9999999887 799999999987665432 2345565 4
Q ss_pred EEeceecCC-CCCCCHHHHHHHhhhc-----CCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccc
Q 018300 226 SMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVA 294 (358)
Q Consensus 226 ~~~~~~~~~-~~~iD~d~le~~i~~~-----~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~ 294 (358)
+++++++++ +..+|++++++.++.. ++|++++..++|| ...+ +++|.++|+++|++|++|+++. .+.+
T Consensus 179 ~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~-~l~y 257 (407)
T PLN02368 179 LVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQ-QNIY 257 (407)
T ss_pred EEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcccc-cccc
Confidence 555556543 3479999999987531 5787776656655 3444 6778889999999999999965 4454
Q ss_pred cCC--ccCC------C----C-CCc-EEEEcCcCcC---ccCcEEEEEE
Q 018300 295 ASV--VADP------F----K-YCD-VVTTTTHKSL---RGPRGGMIFF 326 (358)
Q Consensus 295 ~g~--~~~p------l----~-gaD-iv~~S~hK~L---~Gp~GG~I~~ 326 (358)
.+. .++. + + +.. +++.|++|++ +|+|.|++++
T Consensus 258 ~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~ 306 (407)
T PLN02368 258 QDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEM 306 (407)
T ss_pred CCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEE
Confidence 332 1111 1 1 112 6678999986 6999999985
No 184
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.57 E-value=2.4e-13 Score=134.87 Aligned_cols=225 Identities=18% Similarity=0.147 Sum_probs=140.5
Q ss_pred ccChHHHHHHHHHHHHh-----hhccccccc--CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 85 EADPEVCEIITKEKERQ-----FKSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 85 ~~d~~~~~~i~~e~~~~-----~~~i~lias--~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
..+++.+..+.+...+. +..++|--. +..+++.+++++.+.+.. ...|+. ..|.+ ++++.+.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~---~~G~~---~lr~aia~~~ 77 (393)
T TIGR03538 6 RLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPT---TKGLP---ELRQAIARWL 77 (393)
T ss_pred hCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCC---CCCCH---HHHHHHHHHH
Confidence 34444554444444432 244444433 334688899999876542 123433 22333 4666666667
Q ss_pred HHHcCCCC-CCCcceEEeCCCH-HHHHHHHHHhccCCCE--EEecCCCCCcccccccccchhccccCCceEEEEeceecC
Q 018300 158 LAAFNLDE-NKWGVNVQPLSGS-PANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (358)
Q Consensus 158 a~lfg~~~-~~~~v~V~~~SGt-~A~~~a~~all~pGD~--Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (358)
.+.+|... -++.-+|.+++|+ +|+..++.++++|||+ |++++|.+.++.. .+...|. +++++++++
T Consensus 78 ~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~ 147 (393)
T TIGR03538 78 ERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG--------AALLAGA--EPYFLNCTA 147 (393)
T ss_pred HHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH--------HHHhcCC--eEEEeeccc
Confidence 66666541 1111146667765 5999999999999996 8888876654321 2234565 455666654
Q ss_pred CC-CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCC--ccCCC---
Q 018300 234 ST-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPF--- 302 (358)
Q Consensus 234 ~~-~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~--~~~pl--- 302 (358)
++ ..+|++++++.+.. ++|+|++..++||+ ..+ +++|.++|+++|++|++|+++. .+...+. .++.+
T Consensus 148 ~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~ 225 (393)
T TIGR03538 148 ENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYS-ELYFDEGNPPAGLLQAA 225 (393)
T ss_pred cCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchh-hcccCCCCCCcCHHHhc
Confidence 44 36899999987754 78988876667654 455 7888899999999999999975 3333221 11111
Q ss_pred C--CC-----cEEEEcCcCc--CccCcEEEEEEeCC
Q 018300 303 K--YC-----DVVTTTTHKS--LRGPRGGMIFFKKD 329 (358)
Q Consensus 303 ~--ga-----Div~~S~hK~--L~Gp~GG~I~~~~~ 329 (358)
. +. -+++.|++|. ++|.|.|+++++++
T Consensus 226 ~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~ 261 (393)
T TIGR03538 226 AQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAE 261 (393)
T ss_pred ccccccccccEEEEecchhhcCCcccceEEEecCHH
Confidence 1 11 1778999996 48889999998764
No 185
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.57 E-value=2.8e-13 Score=135.01 Aligned_cols=196 Identities=14% Similarity=0.040 Sum_probs=128.4
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~p 191 (358)
.+++.+.+++...+... ..+|+. ..|.+ ++++.+.+++++.+|.+... .+|.+++|+ .|+..++.++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~-~~~Y~~---~~G~~---~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~~al~~~~~~~~~~ 116 (402)
T PRK06107 46 DTPDHIKQAAVAAIERG-ETKYTL---VNGTP---ALRKAIIAKLERRNGLHYAD--NEITVGGGAKQAIFLALMATLEA 116 (402)
T ss_pred CCCHHHHHHHHHHHHcC-CCCCCC---CCCCH---HHHHHHHHHHHHhcCCCCCh--hhEEEeCCHHHHHHHHHHHhcCC
Confidence 34788889888776532 123433 22433 46666777788888875321 256677775 6999999989999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC-
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD- 267 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d- 267 (358)
||+|+++++.|.++.. .+...+. ..++++++++ +..+|++++++.+.. ++++|++..+++| ...+
T Consensus 117 gd~vl~~~p~y~~y~~--------~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~ 185 (402)
T PRK06107 117 GDEVIIPAPYWVSYPD--------MVLANDG--TPVIVACPEEQGFKLTPEALEAAITP-RTRWLILNAPSNPTGAVYSR 185 (402)
T ss_pred CCEEEEecCCCcCHHH--------HHHHcCC--EEEEecCCcccCCCCCHHHHHhhcCc-CceEEEEECCCCCCCcCcCH
Confidence 9999999986665432 1223333 3444455433 346899999998753 6787776655554 4554
Q ss_pred --HHHHHHHHHHc-CCEEEEeccccccccccCC-ccCCCC---C---CcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 268 --YPRMRQIADAV-GALLMMDMAHISGLVAASV-VADPFK---Y---CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 268 --l~~I~~ia~e~-g~~livD~Ah~~Gl~~~g~-~~~pl~---g---aDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+++|+++|+++ |+++++|.++. .+.+.+. .++... + --+++.|++|.+ +|.|-|+++++++
T Consensus 186 ~~~~~l~~~a~~~~~~~iI~De~y~-~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~ 258 (402)
T PRK06107 186 AELRALADVLLRHPHVLVLTDDIYD-HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPAD 258 (402)
T ss_pred HHHHHHHHHHHHcCCeEEEEehhcc-ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHH
Confidence 67778889998 99999999876 3433321 221111 1 236788999997 5677899998774
No 186
>PRK07682 hypothetical protein; Validated
Probab=99.56 E-value=2.7e-13 Score=133.73 Aligned_cols=207 Identities=17% Similarity=0.116 Sum_probs=134.0
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC-HH
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG-t~ 179 (358)
..++|-.+++ .+++.+++++...+.+.. .+|+. ..|. .++++.+.+++.+.+|.+-. ..-+|.+++| ++
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~---~~lr~~ia~~~~~~~g~~~~-~~~~i~~t~G~~~ 92 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQGY-TSYTA---NAGL---LELRQEIAKYLKKRFAVSYD-PNDEIIVTVGASQ 92 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCc---HHHHHHHHHHHHHHhCCCCC-CCCcEEEeCChHH
Confidence 3456654444 346677888776654322 23432 1233 35777777777777776421 1013555665 56
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
|+..++.++++|||+|++.++.|..+.. .+...|. +.++++++++ ++.+|++++++.+.. ++++|++.
T Consensus 93 al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~ 161 (378)
T PRK07682 93 ALDVAMRAIINPGDEVLIVEPSFVSYAP--------LVTLAGG--VPVPVATTLENEFKVQPAQIEAAITA-KTKAILLC 161 (378)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeecCCccCCCCCHHHHHhhcCc-ccEEEEEE
Confidence 9999999999999999999886654321 2334455 3445555432 457999999998764 68888776
Q ss_pred CCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC---CCcEEEEcCcCcC--ccCcEEEEEE
Q 018300 259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK---YCDVVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 259 ~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~---gaDiv~~S~hK~L--~Gp~GG~I~~ 326 (358)
.+++|+ .. ++++|.++|+++|+++++|+++. .+...+...+ .+. .-.+++.|++|+| +|.|-|++++
T Consensus 162 ~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~ 240 (378)
T PRK07682 162 SPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYA-ELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA 240 (378)
T ss_pred CCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhc
Confidence 566653 44 48889999999999999999976 4443332111 111 2347889999997 4667799999
Q ss_pred eCC
Q 018300 327 KKD 329 (358)
Q Consensus 327 ~~~ 329 (358)
+++
T Consensus 241 ~~~ 243 (378)
T PRK07682 241 PVY 243 (378)
T ss_pred CHH
Confidence 774
No 187
>PRK06855 aminotransferase; Validated
Probab=99.56 E-value=2.9e-13 Score=136.38 Aligned_cols=197 Identities=18% Similarity=0.137 Sum_probs=128.3
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhcc
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILK 190 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~ 190 (358)
-.+|+.+.+++...+.+....+|+. ..|.+ ++++...+++.+.+|.+-. + -+|++++|+. |+..++ .+++
T Consensus 47 ~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~~---~LReaia~~~~~~~g~~~~-~-~~I~it~G~~~al~~~~-~l~~ 117 (433)
T PRK06855 47 EKIPDWMKEIVAELVMDDKSYGYCP---TKGVL---ETREFLAELNNKRGGAQIT-P-DDIIFFNGLGDAIAKIY-GLLR 117 (433)
T ss_pred CCCCHHHHHHHHHHhhcCCCCCCCC---CCCCH---HHHHHHHHHHHhccCCCCC-H-hHEEEcCcHHHHHHHHH-HhcC
Confidence 3678888888877654322223432 23443 5666666777776665421 1 2566777765 887777 4789
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHHHHHhhh-cCCeEEEEcCCCCCC--CC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAIL-FRPKLIIAGASAYPR--DF 266 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~le~~i~~-~~~klIi~~~s~~~~--~~ 266 (358)
|||+|++.+|.|.++... .....|. +++++++++++ ..+|+++|++.+.. .+++++++..++||+ ..
T Consensus 118 ~Gd~Vlv~~P~Y~~~~~~-------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~ 188 (433)
T PRK06855 118 REARVIGPSPAYSTHSSA-------EAAHAGY--PPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVY 188 (433)
T ss_pred CCCeEEEeCCCCchHHHH-------HHHhcCC--eEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCC
Confidence 999999999877654211 0112243 45566666433 46899999998864 256777666666654 44
Q ss_pred C---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC----CC-CcEEEEcCcCcC--ccCcEEEEEEe
Q 018300 267 D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KY-CDVVTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 267 d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl----~g-aDiv~~S~hK~L--~Gp~GG~I~~~ 327 (358)
+ +++|.++|+++|++||+|.++. .+.+.+..+.++ +. --+++.|++|++ +|.|.|+++..
T Consensus 189 s~~~~~~l~~~a~~~~~~II~De~Y~-~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p 258 (433)
T PRK06855 189 PKEILREIVDIAREYDLFIICDEIYN-NIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVY 258 (433)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecccc-ccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEe
Confidence 4 6778889999999999999965 555433211122 11 237889999987 78899999974
No 188
>PRK09148 aminotransferase; Validated
Probab=99.56 E-value=6.1e-13 Score=132.78 Aligned_cols=229 Identities=15% Similarity=0.087 Sum_probs=136.7
Q ss_pred cccccChHHHHHHHHHHHHh----hhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHH
Q 018300 82 SLGEADPEVCEIITKEKERQ----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (358)
Q Consensus 82 ~l~~~d~~~~~~i~~e~~~~----~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~ 155 (358)
++.++.++++..+.+..... ...++|-.+++ .+++.+++++.+.+.+....+|+. ..|.. ++++.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~ 79 (405)
T PRK09148 6 RIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSA---SKGIP---GLRRAQAA 79 (405)
T ss_pred hhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCC---CCCCH---HHHHHHHH
Confidence 34555566555554433321 23345543333 346888888876654322233443 12433 46666666
Q ss_pred HHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC
Q 018300 156 RALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (358)
Q Consensus 156 ~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~ 234 (358)
++.+.+|.+-. +.-+|.+++|+ +|+..++.+++++||+|++++|.|.++.. .....|. ++.+++++++
T Consensus 80 ~~~~~~g~~~~-~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~ 148 (405)
T PRK09148 80 YYARRFGVKLN-PDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGG--VIRSVPAEPD 148 (405)
T ss_pred HHHHHhCCCCC-CCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCC--EEEEEeCCCC
Confidence 66666675421 11146677775 59999999999999999999987766422 1234565 4445555533
Q ss_pred C-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCC-ccCC--CCC-
Q 018300 235 T-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FKY- 304 (358)
Q Consensus 235 ~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~p--l~g- 304 (358)
+ ...+++++.+... .++++|++..+++| ...+ +++|.++|+++|+++++|+++. .+.+.+. .++. +++
T Consensus 149 ~~~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~s~~~~~~~ 226 (405)
T PRK09148 149 EEFFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYS-EIYFDGNPPPSVLQVPGA 226 (405)
T ss_pred CCCccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccch-hhhcCCCCCCChhhCCCc
Confidence 3 2334444333222 36788887766665 4555 4678889999999999999976 3433321 1111 221
Q ss_pred --CcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 305 --CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 305 --aDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
..+++.|++|.+ +|.|.|+++.+++
T Consensus 227 ~~~~i~~~SfSK~~~~pGlR~G~~v~~~~ 255 (405)
T PRK09148 227 KDVTVEFTSMSKTFSMAGWRMGFAVGNER 255 (405)
T ss_pred cCcEEEEeccccccCCcchheeeeeCCHH
Confidence 235689999987 6778899998764
No 189
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.55 E-value=2.4e-13 Score=139.59 Aligned_cols=175 Identities=21% Similarity=0.189 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCC------------CCCcceEEeCCCHHHHHHHHHHh----cc-----------------
Q 018300 144 EYIDELETLCQKRALAAFNLDE------------NKWGVNVQPLSGSPANFEVYTAI----LK----------------- 190 (358)
Q Consensus 144 ~~~~~lE~~~~~~la~lfg~~~------------~~~~v~V~~~SGt~A~~~a~~al----l~----------------- 190 (358)
+...++|+.+.+|++++++..+ ..+ -+++++||.||..++.+- ++
T Consensus 125 pa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~--G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 125 KAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSL--GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCC--eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 3455799999999999985311 112 355678888998887542 11
Q ss_pred -----CCCEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCCCCCCCHHHHHHHhhh---cCCeEE-EE---
Q 018300 191 -----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTGLVDYDMLEKTAIL---FRPKLI-IA--- 257 (358)
Q Consensus 191 -----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~iD~d~le~~i~~---~~~klI-i~--- 257 (358)
+++.|++++.+|. +.. +.+...|.. .++..+++| +++.+|+++|++.+++ .+.+.+ ++
T Consensus 203 ~~~~~~~~~v~~S~~~H~---S~~-----kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvata 273 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHY---SLG-----KAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELAEQNIKPLAIVGVA 273 (522)
T ss_pred hhccCCceEEEECCCchH---HHH-----HHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 2346777765443 321 233344541 133445566 4689999999998853 233333 22
Q ss_pred cCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc---CCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 258 GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 258 ~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~---~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+.+..|...|+++|+++|+++|+++++|+||+.+........ ..++++|.+++++||||.+|.| |+++.+++
T Consensus 274 Gtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~ 349 (522)
T TIGR03799 274 GTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP 349 (522)
T ss_pred cCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH
Confidence 334578889999999999999999999999885544222111 1123789999999999999998 88888875
No 190
>PRK09265 aminotransferase AlaT; Validated
Probab=99.55 E-value=7.7e-13 Score=131.84 Aligned_cols=190 Identities=15% Similarity=0.099 Sum_probs=121.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHc--CCCCCCCcceEEeCCCHH-HHHHHHHHhcc
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQPLSGSP-ANFEVYTAILK 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lf--g~~~~~~~v~V~~~SGt~-A~~~a~~all~ 190 (358)
+++.+.+++...+... .+|+. ..|.+ ++++.+.+++.... +++++ +|.+++|+. ++..++.++++
T Consensus 50 ~~~~i~~~~~~~~~~~--~~Y~~---~~G~~---~lr~~ia~~~~~~~~~~~~~~----~i~~t~G~~~~l~~~~~~~~~ 117 (404)
T PRK09265 50 APDEILRDVIRNLPTA--QGYSD---SKGLF---SARKAIMQYYQQKGIPDVDVD----DIYIGNGVSELIVMAMQALLN 117 (404)
T ss_pred CCHHHHHHHHHHhhcC--CCCCC---CCCcH---HHHHHHHHHHhccCCCCCCcc----cEEEeCChHHHHHHHHHHhCC
Confidence 6788888887655422 24443 22332 34443333332211 55553 466677765 78889999999
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d 267 (358)
|||+|+++++.|..+.. .+...|. +.+.++.+.+ ++.+|++++++.+.. ++++|++..+++| ...+
T Consensus 118 ~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~~ 186 (404)
T PRK09265 118 NGDEVLVPAPDYPLWTA--------AVSLSGG--KPVHYLCDEEAGWFPDLDDIRSKITP-RTKAIVIINPNNPTGAVYS 186 (404)
T ss_pred CCCEEEEeCCCCcChHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCcCCC
Confidence 99999999987765322 2233454 3344444432 457999999998754 6888776555654 5667
Q ss_pred ---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C-CCc-EEEEcCcCcC--ccCcEEEEEEe
Q 018300 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 268 ---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~-gaD-iv~~S~hK~L--~Gp~GG~I~~~ 327 (358)
+++|.++|+++|+++++|+++. .+.+.+....++ . ... +++.|++|++ +|.|.|+++..
T Consensus 187 ~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~ 255 (404)
T PRK09265 187 KELLEEIVEIARQHNLIIFADEIYD-KILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLS 255 (404)
T ss_pred HHHHHHHHHHHHHCCCEEEEehhhh-hccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEe
Confidence 8889999999999999999976 444333211121 1 222 4568899997 67888999864
No 191
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.55 E-value=8.5e-14 Score=149.49 Aligned_cols=165 Identities=20% Similarity=0.212 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc--------cCCCEEEecCCCCCcccccccccchhccc
Q 018300 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--------KPHDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (358)
Q Consensus 147 ~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--------~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~ 218 (358)
.+++.+.+.++++++|.+. +.+++.+|+.|..+.++++- ...++|+++...||.++. .+.
T Consensus 529 lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--------sa~ 596 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--------SAA 596 (939)
T ss_pred HHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--------HHH
Confidence 3556667889999999996 46888899988887665552 234578888877765543 223
Q ss_pred cCCceEEEEeceecCCCCCCCHHHHHHHhhh--cCCeEEEEcC-CCCCCCCC-HHHHHHHHHHcCCEEEEeccccccccc
Q 018300 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGA-SAYPRDFD-YPRMRQIADAVGALLMMDMAHISGLVA 294 (358)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~--~~~klIi~~~-s~~~~~~d-l~~I~~ia~e~g~~livD~Ah~~Gl~~ 294 (358)
..|. +++.++.+ +++.+|+++|++++++ .++++|++.+ +++|...| +++|+++||++|.++++|+||..++..
T Consensus 597 ~~G~--~Vv~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~ 673 (939)
T TIGR00461 597 MAGM--QVVPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG 673 (939)
T ss_pred HCCC--EEEEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCC
Confidence 4565 44444565 5789999999999975 3677776654 55676655 999999999999999999999765542
Q ss_pred cCCccCCCC-CCcEEEEcCcCcCccCc-----E-EEEEEeCC
Q 018300 295 ASVVADPFK-YCDVVTTTTHKSLRGPR-----G-GMIFFKKD 329 (358)
Q Consensus 295 ~g~~~~pl~-gaDiv~~S~hK~L~Gp~-----G-G~I~~~~~ 329 (358)
...|-+ |+|++++|.||+|++|. | |++.+++.
T Consensus 674 ---l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~ 712 (939)
T TIGR00461 674 ---LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH 712 (939)
T ss_pred ---CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh
Confidence 223444 99999999999997444 3 88888864
No 192
>PLN02187 rooty/superroot1
Probab=99.55 E-value=4e-13 Score=136.52 Aligned_cols=194 Identities=12% Similarity=0.058 Sum_probs=126.7
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCCH-HHHHHHHHHhc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS-PANFEVYTAIL 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~~SGt-~A~~~a~~all 189 (358)
.+++.+.+++...+......+|.. ..|. .++++.+.+++.+.+| ++++ +|.+++|+ +|+..++.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lR~aiA~~~~~~~~~~~~~~----~I~it~G~~~al~~~~~~l~ 152 (462)
T PLN02187 83 RTCIEAEDAVVDVLRSGKGNSYGP---GAGI---LPARRAVADYMNRDLPHKLTPE----DIFLTAGCNQGIEIVFESLA 152 (462)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC---CCCh---HHHHHHHHHHHHHhcCCCCCcc----cEEEeCCHHHHHHHHHHHhc
Confidence 356788888887665432223322 1232 2455555555555444 3443 46666665 69999999999
Q ss_pred cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-CCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCC
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF 266 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~ 266 (358)
+|||+|++++|.|.++.. .+...|..+ .++++.+ ++..+|++++++.++. ++++|++..+++| ...
T Consensus 153 ~pGd~Vlv~~P~y~~y~~--------~~~~~g~~~--~~~~l~~~~~~~~d~~~l~~~~~~-~~~~v~i~nP~NPTG~v~ 221 (462)
T PLN02187 153 RPNANILLPRPGFPHYDA--------RAAYSGLEV--RKFDLLPEKEWEIDLEGIEAIADE-NTVAMVVINPNNPCGNVY 221 (462)
T ss_pred CCCCEEEEeCCCCccHHH--------HHHHcCCEE--EEEeCccccCCccCHHHHHHhcCC-CcEEEEEeCCCCCCCCcc
Confidence 999999999987665421 234556644 4444433 3468999999988754 5676666556665 455
Q ss_pred C---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC----CC-cEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 267 D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YC-DVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 267 d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~----ga-Div~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
+ +++|.++|+++|++||+|+++. .+.+.+....++. .. =+++.|++|++ +|.|.|++++.+
T Consensus 222 s~e~l~~i~~~a~~~~i~iI~DE~Y~-~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~ 292 (462)
T PLN02187 222 SHDHLKKVAETARKLGIMVISDEVYD-RTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALND 292 (462)
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecC
Confidence 4 7888999999999999999965 5544332111222 11 26678999995 788999999854
No 193
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.55 E-value=6.9e-14 Score=149.54 Aligned_cols=156 Identities=20% Similarity=0.242 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc-------C-CCEEEecCCCCCcccccccccchhccc
Q 018300 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-------P-HDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (358)
Q Consensus 147 ~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~-------p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~ 218 (358)
+.+.+ .++++++++|.+. +.+++.||+.|++++++++-. + .++|+++...|+.++.. ..
T Consensus 543 q~i~e-lq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas--------a~ 609 (954)
T PRK12566 543 AMIDE-LEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS--------AQ 609 (954)
T ss_pred HHHHH-HHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH--------HH
Confidence 44444 3568999999998 478999999999888877632 3 35778887767665432 23
Q ss_pred cCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCe--EEEEcCCC-CCC-CCCHHHHHHHHHHcCCEEEEeccccccccc
Q 018300 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK--LIIAGASA-YPR-DFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (358)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~k--lIi~~~s~-~~~-~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~ 294 (358)
..|. +++.++.+ ++|.+|+++|++++++.+++ +|.+..++ ++. ..|+++|+++||++|+++++|++|..++..
T Consensus 610 ~~Gi--eVv~Vp~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~ 686 (954)
T PRK12566 610 MAGM--RVVIVECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVG 686 (954)
T ss_pred HCCC--EEEEeccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccC
Confidence 4465 45555566 47899999999998744444 44444444 443 456999999999999999999999876552
Q ss_pred cCCccCCCC-CCcEEEEcCcCcCccCcE
Q 018300 295 ASVVADPFK-YCDVVTTTTHKSLRGPRG 321 (358)
Q Consensus 295 ~g~~~~pl~-gaDiv~~S~hK~L~Gp~G 321 (358)
+..|-+ |+|++++++||||++|+|
T Consensus 687 ---l~~Pg~~GADi~~~s~HKtf~~P~G 711 (954)
T PRK12566 687 ---LARPADIGADVSHMNLHKTFCIPHG 711 (954)
T ss_pred ---CCChhhcCCCEEEecCCcccCcCcc
Confidence 223445 999999999999998876
No 194
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.55 E-value=2.1e-13 Score=137.88 Aligned_cols=201 Identities=19% Similarity=0.171 Sum_probs=140.3
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
..+..+++.+.+++...+... -+.++ .+. ...++|+.+..++++++|.+... .-+++.+||+||+.++.+.
T Consensus 69 ~~~~~~~~~a~~~~~~~~~~n--l~d~~--~~p---~a~~~E~~~v~~l~~l~~~~~~~--~G~~t~GgTean~lal~aa 139 (460)
T COG0076 69 FCPTRVPPVAAELLVSALNKN--LGDPD--ESP---AAAELEERVVNMLSDLLGAPEEA--SGTFTSGGTEANLLALLAA 139 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhhc--CCCcc--cCh---hHHHHHHHHHHHHHHHhCCCCCC--ceEEEcChHHHHHHHHHHH
Confidence 456667777888887665432 23333 222 23479999999999999996433 3466778899999887654
Q ss_pred ---cc--C---CC------EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCe-
Q 018300 189 ---LK--P---HD------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK- 253 (358)
Q Consensus 189 ---l~--p---GD------~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~k- 253 (358)
+. . +. +|+++. .+|++.. |.+.+.|.+.+.++ .++.+..+|+++|++++.+.+..
T Consensus 140 r~~~~~~~~~~~~~~~~~P~ii~s~---~aH~s~~-----Kaa~~lG~~~~~v~--~~~~~~~id~~~l~~~i~~~t~~g 209 (460)
T COG0076 140 RERWRKRALAESGKPGGKPNIVCSE---TAHFSFE-----KAARYLGLGLRRVP--TVPTDYRIDVDALEEAIDENTIGG 209 (460)
T ss_pred HHHHHHHhhhcccccCCCCeEEecC---cchhHHH-----HHHHHhCCCceeEE--eccCccccCHHHHHHHHHhhccCc
Confidence 21 1 11 577765 3666532 45667787666665 44436799999999999876665
Q ss_pred -EEE-EcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccc-cCCcc----CCCCCCcEEEEcCcCcCccCcE-EEEE
Q 018300 254 -LII-AGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVVA----DPFKYCDVVTTTTHKSLRGPRG-GMIF 325 (358)
Q Consensus 254 -lIi-~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~-~g~~~----~pl~gaDiv~~S~hK~L~Gp~G-G~I~ 325 (358)
+|. ++.+.+|..-|+++|.++|++++++++||+|-. |++. ..... ..++++|-++.++||++..|.| |+++
T Consensus 210 ~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~G-G~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il 288 (460)
T COG0076 210 VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFG-GFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVL 288 (460)
T ss_pred eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEcccc-ceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEE
Confidence 443 355667888899999999999999999999855 4433 11111 1223899999999999988876 8888
Q ss_pred EeCC
Q 018300 326 FKKD 329 (358)
Q Consensus 326 ~~~~ 329 (358)
.+++
T Consensus 289 ~rd~ 292 (460)
T COG0076 289 FRDE 292 (460)
T ss_pred EECH
Confidence 8886
No 195
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.55 E-value=1.8e-13 Score=135.63 Aligned_cols=204 Identities=18% Similarity=0.149 Sum_probs=134.6
Q ss_pred hcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-
Q 018300 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP- 179 (358)
Q Consensus 103 ~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~- 179 (358)
.-++|-..+|+ ++|.|++++... . ....||. .. ..+ .++.+++++|++++ +|.+++|+.
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~-~--~~~~Yp~------~~-~~~----lr~~ia~~~~~~~~----~I~~t~Ga~~ 114 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNM-K--FPYVYPD------PE-SRR----LRAALAEDSGLESE----NILVGCGADE 114 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhh-H--hhccCCC------CC-HHH----HHHHHHHHhCcChh----hEEEcCCHHH
Confidence 34555555553 688899988642 1 1111322 11 122 45568889998874 566787765
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
++..++.++++|||+|+++++.++.+.. .....|.. ++.++.+ +++.+|++++++.+...++|+|++..
T Consensus 115 ~i~~~~~~~~~~gd~Vlv~~P~y~~y~~--------~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 183 (380)
T PLN03026 115 LIDLLMRCVLDPGDKIIDCPPTFGMYVF--------DAAVNGAE--VIKVPRT-PDFSLDVPRIVEAVETHKPKLLFLTS 183 (380)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCE--EEEeecC-CCCCcCHHHHHHHHhccCCcEEEEeC
Confidence 8888888889999999999886643311 22345654 4444454 34678999999887445789988876
Q ss_pred CCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcC--ccCcEEEEEEeCCCCch
Q 018300 260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (358)
Q Consensus 260 s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~ 333 (358)
+++| ...+.+++.++++.. +++++|+++. .+...+.....++ .-.+++.|++|.+ +|.|.|++++++
T Consensus 184 P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~-~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~----- 256 (380)
T PLN03026 184 PNNPDGSIISDDDLLKILELP-ILVVLDEAYI-EFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL----- 256 (380)
T ss_pred CCCCCCCCCCHHHHHHHHhcC-CEEEEECcch-hhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH-----
Confidence 7764 588999999999865 9999999975 3332221111122 2347889999996 678889999876
Q ss_pred hHHHHHHhhc
Q 018300 334 VELESAINNA 343 (358)
Q Consensus 334 ~~~~~~i~~~ 343 (358)
++.+++...
T Consensus 257 -~~i~~l~~~ 265 (380)
T PLN03026 257 -SIIEYLWRA 265 (380)
T ss_pred -HHHHHHHHh
Confidence 455555443
No 196
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.55 E-value=1.5e-13 Score=131.73 Aligned_cols=196 Identities=19% Similarity=0.248 Sum_probs=131.1
Q ss_pred ccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHH
Q 018300 109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (358)
Q Consensus 109 as~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~ 186 (358)
.|+|. ++|+++++|...-. .+..-||..+++..+|+ +++++||... .+++.|||+||..++.
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e~----~~ae~~g~~a-----~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALEQ----RIAELFGKEA-----ALFVPSGTQANQLALA 68 (342)
T ss_pred ccCccCCCCHHHHHHHHhccc-------cCCCCCCCCHHHHHHHH----HHHHHhCCce-----EEEecCccHHHHHHHH
Confidence 46675 48999999975421 12223566666555554 5889999943 4677899999999999
Q ss_pred HhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-CCCCCCHHHHHHHhhhc------CCeEEEEcC
Q 018300 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF------RPKLIIAGA 259 (358)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~iD~d~le~~i~~~------~~klIi~~~ 259 (358)
+.++||+.|++-.. +|.. ......+.+.+.. ..++ +.+ .++.+++|+|+..+... +|.+++.+.
T Consensus 69 ~~~~~~~~vi~~~~---aHi~---~~E~Ga~~~~~~~-~~~~--~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~ 139 (342)
T COG2008 69 AHCQPGESVICHET---AHIY---TDECGAPEFFGGG-QKLP--IVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENT 139 (342)
T ss_pred HhcCCCCeEEEecc---ccce---ecccCcHHHHcCC-ceec--cCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeec
Confidence 99999999998653 4432 1112233433321 1222 333 57899999999977531 234555544
Q ss_pred C-CCCCCCC---HHHHHHHHHHcCCEEEEecccccccc-ccCCccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 260 S-AYPRDFD---YPRMRQIADAVGALLMMDMAHISGLV-AASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 260 s-~~~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~-~~g~~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
+ ..|+..+ +++|.++||++|++|++|+|-..-.. +.+.-...+. ++|+++++++|.++.|-|.+|+++.+
T Consensus 140 ~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~ 215 (342)
T COG2008 140 ATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRD 215 (342)
T ss_pred cCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHH
Confidence 3 3576665 56777899999999999998653322 2231111122 89999999999998888888888874
No 197
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.54 E-value=3.7e-13 Score=134.62 Aligned_cols=192 Identities=20% Similarity=0.191 Sum_probs=127.7
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--------CCCCCCcceEEeCCC-HHHHHH
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--------LDENKWGVNVQPLSG-SPANFE 183 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--------~~~~~~~v~V~~~SG-t~A~~~ 183 (358)
.+++.+++++.+.+......+|+.. .|.. ++++.+.+++.+.++ ++++ +|.+++| ++|+..
T Consensus 50 ~p~~~~~~a~~~~~~~~~~~~Y~~~---~G~~---~Lr~aia~~~~~~~~~~~~~~~~~~~~----~i~it~G~~~al~~ 119 (412)
T PTZ00433 50 LTPAIQTKALVEAVDSQECNGYPPT---VGSP---EAREAVATYWRNSFVHKESLKSTIKKD----NVVLCSGVSHAILM 119 (412)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCC---CCcH---HHHHHHHHHHHhhccccccccCCCChh----hEEEeCChHHHHHH
Confidence 5788999998876654222344431 1332 466655555555443 3443 4556666 469999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAY 262 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~ 262 (358)
++.++++|||+|+++++.|..+.. .+...|.. +.+++++++ ++.+|++++++.+.. ++|+|++..++|
T Consensus 120 ~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~--~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~N 188 (412)
T PTZ00433 120 ALTALCDEGDNILVPAPGFPHYET--------VCKAYGIE--MRFYNCRPEKDWEADLDEIRRLVDD-RTKALIMTNPSN 188 (412)
T ss_pred HHHHhcCCCCEEEEccCCcccHHH--------HHHHcCCE--EEEEecCccccCcCCHHHHHHHhcc-CceEEEEeCCCC
Confidence 999999999999999987655422 23445654 444445433 458999999988764 688888866666
Q ss_pred CC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCC-ccC--CCC-C-CcEEEEcCcCcC--ccCcEEEEEE
Q 018300 263 PR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK-Y-CDVVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 263 ~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~--pl~-g-aDiv~~S~hK~L--~Gp~GG~I~~ 326 (358)
|+ .. ++++|.++|+++|++|++|+++. .+.+.+. .+. .++ . --+++.|++|++ +|.|-|+++.
T Consensus 189 PtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 189 PCGSNFSRKHVEDIIRLCEELRLPLISDEIYA-GMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred CCCcccCHHHHHHHHHHHHHcCCeEEEecccc-ccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEE
Confidence 54 33 47888999999999999999975 5554332 111 122 1 126788999986 7788899997
No 198
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.53 E-value=7.7e-13 Score=132.27 Aligned_cols=194 Identities=14% Similarity=0.062 Sum_probs=128.0
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCCH-HHHHHHHHHh
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS-PANFEVYTAI 188 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SGt-~A~~~a~~al 188 (358)
..+++.+++++...+......+|+. ..|.. ++.+.+.+++.+.+|. +++ +|++++|+ +|+..++.++
T Consensus 48 ~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~~~----~I~it~G~~~al~~~~~~l 117 (409)
T PLN00143 48 FRTTNIAEDAIVEAVRSAKFNSYAP---TGGIL---PARRAIADYLSNDLPYQLSPD----DVYLTLGCKHAAEIIIKVL 117 (409)
T ss_pred CCCCHHHHHHHHHHHhCcCCCCCCC---CCCCH---HHHHHHHHHHHhhcCCCCCHh----hEEEecChHHHHHHHHHHH
Confidence 4678889999887665432233422 12433 4555555666555543 443 46666665 5999999999
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CC
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RD 265 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~ 265 (358)
++|||+|++.+|.|.++.. .+...|. ++..++++++ +..+|++++++.+.. +++++++..++|| ..
T Consensus 118 ~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~~~~~nP~NPTG~~ 186 (409)
T PLN00143 118 ARPEANILLPRPGFPDVET--------YAIFHHL--EIRHFDLLPEKGWEVDLDAVEAIADE-NTIAMVIINPGNPCGSV 186 (409)
T ss_pred cCCCCEEEEcCCCCcCHHH--------HHHHcCC--EEEEEeccCCCCCcCCHHHHHHhccc-CCEEEEEECCCCCCCCc
Confidence 9999999999987665422 2234555 4445555433 346899999988754 5666665555665 45
Q ss_pred CC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCC--cEEEEcCcCc--CccCcEEEEEEe
Q 018300 266 FD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYC--DVVTTTTHKS--LRGPRGGMIFFK 327 (358)
Q Consensus 266 ~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~ga--Div~~S~hK~--L~Gp~GG~I~~~ 327 (358)
.+ +++|.++|+++|+++++|+++. .+.+.+....++ +.. =+++.|++|. ++|.|.|++++.
T Consensus 187 ~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~ 257 (409)
T PLN00143 187 YSYEHLNKIAETARKLGILVIADEVYG-HIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTC 257 (409)
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEcccc-ccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEee
Confidence 55 7788889999999999999965 555433211222 211 2678999999 478899999984
No 199
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.53 E-value=1.1e-12 Score=126.04 Aligned_cols=178 Identities=19% Similarity=0.145 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEE
Q 018300 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (358)
Q Consensus 146 ~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (358)
.+++++..++.+...++...... ..++..+|+.++..++.++.++||+|+++++.|.++.. .+...+. +
T Consensus 38 ~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~--------~~~~~~~--~ 106 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPE-EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA--------AARLAGA--E 106 (350)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc-eEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCC--E
Confidence 34677766666666655311111 13445567789999999999999999999876555421 2334454 4
Q ss_pred EEeceecCCCCCCCH--HHHHHHhhhcCCeEEEEcCCCC--CCCCCHH---HHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 226 SMPYRLDESTGLVDY--DMLEKTAILFRPKLIIAGASAY--PRDFDYP---RMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 226 ~~~~~~~~~~~~iD~--d~le~~i~~~~~klIi~~~s~~--~~~~dl~---~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
+..++.++ ++..+. +.++.... .++++|++..+++ |...|++ +|.++|+++|+++++|++|+.+.. .+..
T Consensus 107 ~~~i~~~~-~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~-~~~~ 183 (350)
T cd00609 107 VVPVPLDE-EGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVY-DGEP 183 (350)
T ss_pred EEEEeccc-ccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhcee-CCcc
Confidence 44445553 333333 55555543 4788888765554 5566655 455899999999999999975443 2222
Q ss_pred c---CCCC--CCcEEEEcCcCcCc--cCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 299 A---DPFK--YCDVVTTTTHKSLR--GPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 299 ~---~pl~--gaDiv~~S~hK~L~--Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+ ...+ ++|+++.|+||+++ |++.|+++++++ ++.+.+..
T Consensus 184 ~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-----~~~~~~~~ 229 (350)
T cd00609 184 PPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-----ELLERLKK 229 (350)
T ss_pred cccccCcCccCcEEEEeecccccCCcccceEEEecCHH-----HHHHHHHH
Confidence 1 1122 68999999999984 567799999884 45555544
No 200
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.53 E-value=8.9e-13 Score=134.56 Aligned_cols=196 Identities=15% Similarity=0.126 Sum_probs=127.3
Q ss_pred CCCcHHHHHHHhhhhhccc--CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHh
Q 018300 112 NFTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI 188 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~--~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~al 188 (358)
...|..+++++...+.... ..+|+. ..|.. ++++.+.+++.+..|.+.+ . -+|++++|+ +|+..++.++
T Consensus 87 ~~~P~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~LR~aia~~~~~~~g~~~~-~-~~I~it~Ga~~al~~~~~~l 158 (481)
T PTZ00377 87 SLFPADVVARAKEYLNAIGGGTGAYTD---SAGYP---FVRKAVAAFIERRDGVPKD-P-SDIFLTDGASSGIKLLLQLL 158 (481)
T ss_pred ccCCHHHHHHHHHHHHhCCCcccCcCc---ccCCH---HHHHHHHHHHHHhcCCCCC-h-hhEEEcCCHHHHHHHHHHHh
Confidence 3456788888765444321 112332 12333 5666666777666665431 1 256677776 5999999999
Q ss_pred c-cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC-CCCHHHHHHHhhhc-----CCeEEEEcCCC
Q 018300 189 L-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-LVDYDMLEKTAILF-----RPKLIIAGASA 261 (358)
Q Consensus 189 l-~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~iD~d~le~~i~~~-----~~klIi~~~s~ 261 (358)
+ +|||+|++++|.|.++.. .+...|. ++++++++++++ .+|++++++.+... ++|+|++..++
T Consensus 159 ~~~~gD~Vlv~~P~y~~y~~--------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~ 228 (481)
T PTZ00377 159 IGDPSDGVMIPIPQYPLYSA--------AITLLGG--KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPG 228 (481)
T ss_pred ccCCCCEEEECCCCchhHHH--------HHHHcCC--EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCC
Confidence 8 799999999987665432 2345565 455566665444 79999999987542 68876665556
Q ss_pred CC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccC--CccCC------CC-C---C-c-EEEEcCcCcC---ccC
Q 018300 262 YP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAAS--VVADP------FK-Y---C-D-VVTTTTHKSL---RGP 319 (358)
Q Consensus 262 ~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g--~~~~p------l~-g---a-D-iv~~S~hK~L---~Gp 319 (358)
|| ...+ +++|+++|+++|++||+|+++. .+.+.+ .+++. ++ . - . +++.|++|++ +|.
T Consensus 229 NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~-~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~Gl 307 (481)
T PTZ00377 229 NPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQ-ENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGR 307 (481)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhH-hhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcC
Confidence 55 4555 7889999999999999999975 444422 11111 11 1 0 1 5678999974 589
Q ss_pred cEEEEEE
Q 018300 320 RGGMIFF 326 (358)
Q Consensus 320 ~GG~I~~ 326 (358)
|.|++++
T Consensus 308 RiG~~~~ 314 (481)
T PTZ00377 308 RGGYFEL 314 (481)
T ss_pred ceEEEEE
Confidence 9999987
No 201
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.53 E-value=9.4e-14 Score=150.91 Aligned_cols=165 Identities=21% Similarity=0.203 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh----ccCCC----EEEecCCCCCcccccccccchhccc
Q 018300 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVS 218 (358)
Q Consensus 147 ~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al----l~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~ 218 (358)
.+++...++++++++|.+. +.+++.+|+.|+++.+.++ .++|| +|++++..|++++. .+.
T Consensus 541 l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~--------sa~ 608 (954)
T PRK05367 541 RELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA--------SAV 608 (954)
T ss_pred HHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH--------HHH
Confidence 3556667899999999985 4677777777776655443 36776 58888876665532 234
Q ss_pred cCCceEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcCCC-CCC-CCCHHHHHHHHHHcCCEEEEeccccccccc
Q 018300 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASA-YPR-DFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (358)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~s~-~~~-~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~ 294 (358)
..|. +++.++.+ .++.+|+++|++.++.+ ++.+|++..++ ++. ..|+++|+++||++|+++++|+||..+++.
T Consensus 609 ~~G~--~vv~v~~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~ 685 (954)
T PRK05367 609 MAGM--KVVVVACD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVG 685 (954)
T ss_pred HCCC--EEEEECCC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccC
Confidence 5565 44454455 35899999999998754 34455554444 444 368999999999999999999999866553
Q ss_pred cCCccCCCC-CCcEEEEcCcCcCccCcE------EEEEEeCC
Q 018300 295 ASVVADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKD 329 (358)
Q Consensus 295 ~g~~~~pl~-gaDiv~~S~hK~L~Gp~G------G~I~~~~~ 329 (358)
+..|.+ |+|++++|+||||++|.| |++.+++.
T Consensus 686 ---l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~ 724 (954)
T PRK05367 686 ---LARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH 724 (954)
T ss_pred ---CCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc
Confidence 223445 999999999999976654 57777753
No 202
>PRK03321 putative aminotransferase; Provisional
Probab=99.53 E-value=1.4e-13 Score=134.33 Aligned_cols=194 Identities=19% Similarity=0.152 Sum_probs=129.9
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pG 192 (358)
+++.+++++...+.. . ..||. .| .+++ ++.+++++|++++ +|.+++|+. ++..++.++++||
T Consensus 36 ~~~~~~~a~~~~~~~-~-~~y~~----~g---~~~l----r~~ia~~~~~~~~----~I~~~~G~~~~l~~~~~~~~~~g 98 (352)
T PRK03321 36 PLPSVRAAIARAAAG-V-NRYPD----MG---AVEL----RAALAEHLGVPPE----HVAVGCGSVALCQQLVQATAGPG 98 (352)
T ss_pred CCHHHHHHHHHHHHh-c-CcCCC----Cc---HHHH----HHHHHHHhCcCHH----HEEECCCHHHHHHHHHHHhcCCC
Confidence 577899998876542 1 23432 12 2233 4557888898764 466788876 6777778889999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHH
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPR 270 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~ 270 (358)
|+|+++.+.+..+.. .....|. +++.+++++ ++.+|++++++.+.. ++|+|++..+++ |...+.++
T Consensus 99 d~Vli~~p~y~~~~~--------~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~ 166 (352)
T PRK03321 99 DEVIFAWRSFEAYPI--------LVQVAGA--TPVQVPLTP-DHTHDLDAMAAAITD-RTRLIFVCNPNNPTGTVVTPAE 166 (352)
T ss_pred CEEEeCCCCHHHHHH--------HHHHcCC--EEEEccCCC-CCCCCHHHHHHhhcc-CCCEEEEeCCCCCcCCCcCHHH
Confidence 999998765433211 1234455 445555653 367899999998764 788887765555 46789999
Q ss_pred HHHHHHH--cCCEEEEeccccccccccCCccCCCC----CCc-EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHh
Q 018300 271 MRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 271 I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl~----gaD-iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
|.++|++ +|+++++|++|. ++...+..+.++. .-+ +++.|++|.| +|.|.|++++++ ++.+.+.
T Consensus 167 l~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~------~~~~~~~ 239 (352)
T PRK03321 167 LARFLDAVPADVLVVLDEAYV-EYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP------EVIAALR 239 (352)
T ss_pred HHHHHHhCCCCeEEEEechHH-HhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH------HHHHHHH
Confidence 9999987 599999999976 4443332222221 123 6678999997 467789999876 5666665
Q ss_pred hc
Q 018300 342 NA 343 (358)
Q Consensus 342 ~~ 343 (358)
..
T Consensus 240 ~~ 241 (352)
T PRK03321 240 KV 241 (352)
T ss_pred Hh
Confidence 43
No 203
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.53 E-value=2.3e-13 Score=133.10 Aligned_cols=207 Identities=18% Similarity=0.125 Sum_probs=137.7
Q ss_pred cccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-H
Q 018300 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-A 180 (358)
Q Consensus 104 ~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A 180 (358)
-++|-..+| .+++.+++++.+.+......+||. .|. .+ .++.+++++|.+.. .+|.+++|+. +
T Consensus 28 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~~~---~~----lr~~ia~~~~~~~~---~~I~~t~G~~~~ 93 (356)
T PRK04870 28 MVKLDAMENPYRLPAELRAELGERLAEVALNRYPD----PRA---AA----LKAALRAAMGVPAG---ADVLLGNGSDEL 93 (356)
T ss_pred ceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC----CCH---HH----HHHHHHHHhCcCCC---CcEEEcCCHHHH
Confidence 344544455 468999999987664322234443 121 12 35557888888643 2577788875 7
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
+..++.++++|||+|+++++.|.++.. .+...|. ++++++++ +++.+|++++++.+...++|+|++..+
T Consensus 94 i~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~p 162 (356)
T PRK04870 94 IQLLALACAKPGATVLAPEPGFVMYRM--------SAKLAGL--EFVGVPLT-ADFTLDLPAMLAAIAEHRPALVFLAYP 162 (356)
T ss_pred HHHHHHHhcCCCCEEEECCCCHHHHHH--------HHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCCEEEEcCC
Confidence 888888889999999999875544321 2345565 45566666 346899999999886567899888766
Q ss_pred CCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCc-CccCcEEEEEEeCCCCchhH
Q 018300 261 AYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVE 335 (358)
Q Consensus 261 ~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~-L~Gp~GG~I~~~~~~~~~~~ 335 (358)
++| ...+.+++.++++..++++++|+++. .+......+ .+. .--+++.|++|+ ++|.|.|++++++ +
T Consensus 163 ~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~-~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~------~ 234 (356)
T PRK04870 163 NNPTGNLFDDADVERIIEAAPGLVVVDEAYQ-PFAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHP------A 234 (356)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEEECCch-hhcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCH------H
Confidence 654 57888888888887799999999975 332211111 122 123778999993 3677889999876 4
Q ss_pred HHHHHhhc
Q 018300 336 LESAINNA 343 (358)
Q Consensus 336 ~~~~i~~~ 343 (358)
+.+++...
T Consensus 235 ~i~~~~~~ 242 (356)
T PRK04870 235 WIAELDKV 242 (356)
T ss_pred HHHHHHHc
Confidence 55555543
No 204
>PLN02231 alanine transaminase
Probab=99.52 E-value=6.7e-13 Score=137.03 Aligned_cols=203 Identities=16% Similarity=0.113 Sum_probs=129.4
Q ss_pred ccccccCCCCcHHHHHHHhhhhhccc---CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~---~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A 180 (358)
|++-+.+...|..+++.....+.... ..+|.. ..|.+ ++.+.+.+++.+..|.+.+ + -+|++++|+ +|
T Consensus 132 i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~---s~G~~---~lReaIA~~~~~r~g~~~~-p-e~I~iT~Ga~~a 203 (534)
T PLN02231 132 LDKSETHGLFSADAIERAWQILDQIPGRATGAYSH---SQGIK---GLRDAIAAGIEARDGFPAD-P-NDIFLTDGASPA 203 (534)
T ss_pred CCCCCccccCCHHHHHHHHHHHHhcCCccccCcCC---CCCcH---HHHHHHHHHHHhccCCCCC-c-ccEEEeCCHHHH
Confidence 44434444456677666665554421 122332 22433 5666667777776675421 1 246667776 59
Q ss_pred HHHHHHHhc-cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHHHHHhhhc-----CCe
Q 018300 181 NFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILF-----RPK 253 (358)
Q Consensus 181 ~~~a~~all-~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~le~~i~~~-----~~k 253 (358)
+..++.+++ .+||.|++++|.|..+.. .+...|. +++++++++++ ..+|+++|++.++.. ++|
T Consensus 204 i~~~~~~l~~~~gd~Vli~~P~Y~~y~~--------~~~~~g~--~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k 273 (534)
T PLN02231 204 VHMMMQLLIRSEKDGILCPIPQYPLYSA--------SIALHGG--TLVPYYLDEATGWGLEISELKKQLEDARSKGITVR 273 (534)
T ss_pred HHHHHHHhccCCCCEEEEeCCCChhHHH--------HHHHcCC--EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeE
Confidence 999999987 489999999987766532 2344565 45666677543 489999999987642 578
Q ss_pred EEEEcCCCCC--CCC---CHHHHHHHHHHcCCEEEEecccccccccc-CCccCCC---C---C---Cc---EEEEcCcCc
Q 018300 254 LIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPF---K---Y---CD---VVTTTTHKS 315 (358)
Q Consensus 254 lIi~~~s~~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~~~~pl---~---g---aD---iv~~S~hK~ 315 (358)
+|++..++|| ... .+++|+++|+++|++|++|+++. .+++. +....++ . + -| +++.|++|.
T Consensus 274 ~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~-~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~ 352 (534)
T PLN02231 274 ALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQ-ENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKG 352 (534)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccch-hcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcc
Confidence 7766555655 344 47788999999999999999965 44442 2111111 0 1 12 456799996
Q ss_pred C---ccCcEEEEEE
Q 018300 316 L---RGPRGGMIFF 326 (358)
Q Consensus 316 L---~Gp~GG~I~~ 326 (358)
+ +|.|+|+++.
T Consensus 353 ~~g~pGlRiGy~~~ 366 (534)
T PLN02231 353 YYGECGKRGGYMEV 366 (534)
T ss_pred cccCCccceEEEEE
Confidence 5 5899999976
No 205
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.51 E-value=4.3e-13 Score=131.60 Aligned_cols=203 Identities=19% Similarity=0.151 Sum_probs=132.6
Q ss_pred hcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-
Q 018300 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP- 179 (358)
Q Consensus 103 ~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~- 179 (358)
.-+++-..+++ +++.+++++...+.. . ..|+.. . ..++ ++.+++++|++++ +|.+++|+.
T Consensus 33 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~-----~--~~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 95 (367)
T PRK02731 33 DIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG-----S--GFEL----KAALAEKFGVDPE----RIILGNGSDE 95 (367)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC-----c--HHHH----HHHHHHHhCcCHH----HEEEcCCHHH
Confidence 33455443343 578899988776532 2 234331 1 1234 4457788898764 466777775
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
++..++.+++++||+|++.++.|..+.. .....|.. +++++.+ ++.+|++++++.+.. ++|+|++..
T Consensus 96 ~l~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~--~~~~~~~--~~~~~~~~l~~~~~~-~~~~v~l~~ 162 (367)
T PRK02731 96 ILELLARAYLGPGDEVIYSEHGFAVYPI--------AAQAVGAK--PVEVPAK--DYGHDLDAMLAAVTP-RTRLVFIAN 162 (367)
T ss_pred HHHHHHHHhcCCCCEEEEecCCHHHHHH--------HHHHcCCe--EEEeccc--CCCCCHHHHHHHhCC-CCcEEEEeC
Confidence 6777788889999999999876543311 12345653 4444443 468899999998863 789888766
Q ss_pred CCC--CCCCCHHHHHHHHHHc--CCEEEEeccccccccccCCccCCC---C-C-CcEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 260 SAY--PRDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 260 s~~--~~~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl---~-g-aDiv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
+++ |...+.+++.++++.+ |+++++|++|... ...+....++ + . -.+++.|++|.+ +|.|.|++++++
T Consensus 163 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 241 (367)
T PRK02731 163 PNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEY-VRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP 241 (367)
T ss_pred CCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHh-ccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence 655 5688999999999875 9999999997643 2222111112 1 1 236778999985 577889999876
Q ss_pred CCCchhHHHHHHhh
Q 018300 329 DPVLGVELESAINN 342 (358)
Q Consensus 329 ~~~~~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 242 ------~~~~~l~~ 249 (367)
T PRK02731 242 ------EIIDALNR 249 (367)
T ss_pred ------HHHHHHHH
Confidence 55565554
No 206
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.51 E-value=2.9e-12 Score=127.03 Aligned_cols=192 Identities=17% Similarity=0.179 Sum_probs=119.8
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHc--CCCCCCCcceEEeCC-CHHHHHHHHHHhc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQPLS-GSPANFEVYTAIL 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lf--g~~~~~~~v~V~~~S-Gt~A~~~a~~all 189 (358)
.+++.+.+++..... ...+|+. ..|.+ ++++.+.+++. .. +++++ +|.+++ |++|+..++.+++
T Consensus 43 ~~~~~~~~a~~~~~~--~~~~Y~~---~~g~~---~lr~~ia~~~~-~~~~~~~~~----~i~~t~G~~~al~~~~~~l~ 109 (397)
T PRK07568 43 KTPEVFFEAIKNYDE--EVLAYSH---SQGIP---ELREAFAKYYK-KWGIDVEPD----EILITNGGSEAILFAMMAIC 109 (397)
T ss_pred CCCHHHHHHHHHHhc--CCcCcCC---CCCCH---HHHHHHHHHHH-HhCCCCCcc----eEEEcCChHHHHHHHHHHhc
Confidence 457888888865432 1123332 12332 44444333333 12 34443 455555 5569999998999
Q ss_pred cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC-C-CCHHHHHHHhhhcCCeEEEEcCCCCC--CC
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-L-VDYDMLEKTAILFRPKLIIAGASAYP--RD 265 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-iD~d~le~~i~~~~~klIi~~~s~~~--~~ 265 (358)
+|||+|+++++.+..+.. .....|. ++.+++++++++ . .|++++++.+.. ++++|++..+++| ..
T Consensus 110 ~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~~~~~~l~~~~~~-~~~~v~i~~p~NPtG~~ 178 (397)
T PRK07568 110 DPGDEILVPEPFYANYNG--------FATSAGV--KIVPVTTKIEEGFHLPSKEEIEKLITP-KTKAILISNPGNPTGVV 178 (397)
T ss_pred CCCCEEEEecCCCccHHH--------HHHHcCC--EEEEeecCcccCCCCCCHHHHHHhcCc-cceEEEEECCCCCCCcc
Confidence 999999999876544321 1234465 344545543333 2 468999988754 6788877655554 34
Q ss_pred C---CHHHHHHHHHHcCCEEEEeccccccccccCC-ccCCCC--C-Cc--EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y-CD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 266 ~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~pl~--g-aD--iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
. ++++|.++|+++|+++++|+++. ++...+. .++... + .+ +++.|++|++ +|.|.|++++.++
T Consensus 179 ~~~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~ 252 (397)
T PRK07568 179 YTKEELEMLAEIAKKHDLFLISDEVYR-EFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNK 252 (397)
T ss_pred CCHHHHHHHHHHHHHCCcEEEEeccch-hcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCH
Confidence 4 57899999999999999999965 4544332 222222 2 23 7788999997 4778899998643
No 207
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=5.7e-13 Score=131.02 Aligned_cols=208 Identities=18% Similarity=0.157 Sum_probs=138.9
Q ss_pred ccccccCC--CCcHHHHHHHhhhhhcc--cCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCCH
Q 018300 105 LELIASEN--FTSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS 178 (358)
Q Consensus 105 i~lias~n--~~s~~V~~al~~~l~~~--~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SGt 178 (358)
++|-..+| .+++.+++++...+... ...+||. .|. ..+++.+.+++.+.+|. +++ +|++++|+
T Consensus 29 i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~----~g~---~~lr~aia~~~~~~~~~~~~~~----~I~it~G~ 97 (368)
T PRK03317 29 VRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD----RDA---VALRADLAAYLTAQTGVGLTVE----NVWAANGS 97 (368)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC----Cch---HHHHHHHHHHhhhhccCCCChh----hEEECCCH
Confidence 44543444 46888999998765431 1223442 122 34666666666665554 443 57778886
Q ss_pred H-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEE
Q 018300 179 P-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (358)
Q Consensus 179 ~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~ 257 (358)
. ++..++.++++|||+|++..|.|.++.. .....|. ++++++.+ ++..+|++++++.+...++|+|++
T Consensus 98 ~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~l 166 (368)
T PRK03317 98 NEILQQLLQAFGGPGRTALGFVPSYSMHPI--------IARGTHT--EWVEGPRA-ADFTLDVDAAVAAIAEHRPDVVFL 166 (368)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHhcCC--eeEEcccC-CCCCCCHHHHHHHHhccCCCEEEE
Confidence 5 9999999999999999999887655422 2223443 45555444 345789999999887567888877
Q ss_pred cCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C-CCc-EEEEcCcCcC--ccCcEEEEEEeC
Q 018300 258 GASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 258 ~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~-gaD-iv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
..+++ |...+.+++.++++.+++++++|++|. ++...+. +..+ + .-+ +++.|++|.+ +|.|-|++++++
T Consensus 167 ~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~-~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~ 244 (368)
T PRK03317 167 TSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA-EFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP 244 (368)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch-hhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH
Confidence 66665 568899999999999999999999987 4432221 1111 1 123 6677999987 467779999876
Q ss_pred CCCchhHHHHHHhh
Q 018300 329 DPVLGVELESAINN 342 (358)
Q Consensus 329 ~~~~~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 245 ------~~~~~l~~ 252 (368)
T PRK03317 245 ------AVVDALRL 252 (368)
T ss_pred ------HHHHHHHh
Confidence 56666654
No 208
>PLN02880 tyrosine decarboxylase
Probab=99.51 E-value=4.3e-13 Score=137.13 Aligned_cols=175 Identities=18% Similarity=0.150 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCC----cceEEeCCCHHHHHHHHHHh----cc-C-----CC-EEEecCCCCCcccccc
Q 018300 145 YIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAI----LK-P-----HD-RIMGLDLPHGGHLSHG 209 (358)
Q Consensus 145 ~~~~lE~~~~~~la~lfg~~~~~~----~v~V~~~SGt~A~~~a~~al----l~-p-----GD-~Vl~~~~~~ggh~s~~ 209 (358)
...++|+.+.+|+++++|.+...+ +.-++.++||.||+.++.+. ++ . .. .|++++. +|.+.
T Consensus 119 ~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~---aH~Sv- 194 (490)
T PLN02880 119 AATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQ---THSAL- 194 (490)
T ss_pred ccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCC---chHHH-
Confidence 345799999999999999986321 11345567889998877543 11 1 12 3344443 45442
Q ss_pred cccchhccccCCce---EEEEeceecC-CCCCCCHHHHHHHhhhc-----CCeEEEE--cCCCCCCCCCHHHHHHHHHHc
Q 018300 210 FMTPKRRVSGTSIY---FESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIA--GASAYPRDFDYPRMRQIADAV 278 (358)
Q Consensus 210 ~~~~~~~~~~~g~~---~~~~~~~~~~-~~~~iD~d~le~~i~~~-----~~klIi~--~~s~~~~~~dl~~I~~ia~e~ 278 (358)
.|++...|.. ++.++ +++ +++.+|+++|++.+++. .|-+|+. +.+.+|..-|+++|+++|+++
T Consensus 195 ----~Kaa~~lGlg~~~v~~Vp--~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~ 268 (490)
T PLN02880 195 ----QKACQIAGIHPENCRLLK--TDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSN 268 (490)
T ss_pred ----HHHHHHcCCCHHHEEEee--cCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHc
Confidence 1345566653 33444 553 35689999999988642 2444544 345567788999999999999
Q ss_pred CCEEEEeccccccccccCCcc---CCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 279 GALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 279 g~~livD~Ah~~Gl~~~g~~~---~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|++++||+||+.+....+.+. .-+++||.++.++|||+..|.+ |++++++.
T Consensus 269 ~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~ 323 (490)
T PLN02880 269 GMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDR 323 (490)
T ss_pred CCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCH
Confidence 999999999986644322111 1123789999999999999987 78887753
No 209
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.50 E-value=3.3e-12 Score=127.36 Aligned_cols=191 Identities=19% Similarity=0.103 Sum_probs=123.1
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC------CCCCCcceEEeCC-CHHHHHHH
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL------DENKWGVNVQPLS-GSPANFEV 184 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~------~~~~~~v~V~~~S-Gt~A~~~a 184 (358)
-++++.+++++...+......+|+. ..|.. ++++ .++++++. +++ +|.+++ +++|+..+
T Consensus 47 ~~~~~~~~~~~~~~l~~~~~~~Y~~---~~g~~---~lr~----~ia~~l~~~~~~~~~~~----~ii~t~G~t~al~~~ 112 (403)
T TIGR01265 47 LRTDPEAEEAVKDALRSGKFNGYAP---SVGAL---AARE----AVAEYLSSDLPGKLTAD----DVVLTSGCSQAIEIC 112 (403)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCCC---CCCCH---HHHH----HHHHHHHhhcCCCCCHH----HEEEecChHHHHHHH
Confidence 4678899999987775443333422 12322 3443 35555553 222 344454 56799999
Q ss_pred HHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCC
Q 018300 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (358)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~ 263 (358)
+.++.++||+|+++++.|.++.. .....|. ++.+++++++ ++.+|++++++.+.. +++++++..+++|
T Consensus 113 ~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~i~~p~NP 181 (403)
T TIGR01265 113 IEALANPGANILVPRPGFPLYDT--------RAAFSGL--EVRLYDLLPEKDWEIDLDGLEALADE-KTVAIVVINPSNP 181 (403)
T ss_pred HHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEecCCcccCCccCHHHHHHHhCc-CccEEEEecCCCC
Confidence 99999999999999886654311 2234455 3444445433 457999999988754 6777777655554
Q ss_pred --CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C-CCc-EEEEcCcCcC--ccCcEEEEEEeC
Q 018300 264 --RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 264 --~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~-gaD-iv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
...+ +++|.++|+++|+++++|+++. .+...+....++ + ... +++.|++|.+ +|.|-|+++..+
T Consensus 182 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~ 257 (403)
T TIGR01265 182 CGSVFSRDHLQKIAEVARKLGIPIIADEIYG-HMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHD 257 (403)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeC
Confidence 4554 8889999999999999999965 444333111122 2 222 6678999984 777889998854
No 210
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.50 E-value=6e-13 Score=134.30 Aligned_cols=158 Identities=18% Similarity=0.190 Sum_probs=112.2
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCC-CHHHHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~S-Gt~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
.++++++++|++.+ ++.+++ |+.++.+++.++ +++||+|+++++.|+++..... ......|. ++..++
T Consensus 117 ~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~----~~~~~~G~--~~~~v~ 186 (447)
T PRK00451 117 YQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLK----TYLKGQGI--EVVEVP 186 (447)
T ss_pred HHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHH----HHHHhCCc--EEEEec
Confidence 45678999999874 454454 556787888887 5899999999876655432100 00112454 444555
Q ss_pred ecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEE--eccccccccccCCccCCCC-CCc
Q 018300 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMM--DMAHISGLVAASVVADPFK-YCD 306 (358)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~~~~dl~~I~~ia~e~g~~liv--D~Ah~~Gl~~~g~~~~pl~-gaD 306 (358)
+++ + .+|++++++.+++ ++++|++..++ +|...|+++|.++|+++|+++++ |.. +.|.. +.+-+ ++|
T Consensus 187 ~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~-----~~~~~~~~D 257 (447)
T PRK00451 187 YED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLL-----KPPGEYGAD 257 (447)
T ss_pred CCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccC-----CCcccCCCC
Confidence 664 3 8999999998864 68888776544 57788999999999999999998 533 33332 22334 899
Q ss_pred EEEEcCcCc-----CccCcEEEEEEeCC
Q 018300 307 VVTTTTHKS-----LRGPRGGMIFFKKD 329 (358)
Q Consensus 307 iv~~S~hK~-----L~Gp~GG~I~~~~~ 329 (358)
++++|+||+ ++||+.|+++++++
T Consensus 258 ~~~~s~~k~~~~~~~~Gpg~G~l~~~~~ 285 (447)
T PRK00451 258 IVVGEGQPLGIPLSFGGPYLGFFATRKK 285 (447)
T ss_pred EEEECCCcCCCCCCCCCCCchHHHhhHH
Confidence 999999996 68898899988774
No 211
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.50 E-value=7.1e-13 Score=135.80 Aligned_cols=167 Identities=16% Similarity=0.114 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccc-cCC
Q 018300 148 ELETLCQKRALAAFN----LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTS 221 (358)
Q Consensus 148 ~lE~~~~~~la~lfg----~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~-~~g 221 (358)
++.+.+.+++.+.+| ++++ +|++++|+ +|+..++.++++|||.|++++|.|.++.. .+. ..|
T Consensus 98 ~LR~aiA~~l~~~~g~~v~v~pe----~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~--------~~~~~~G 165 (496)
T PLN02376 98 KFRQAIAHFMGKARGGKVTFDPE----RVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR--------DLRWRTG 165 (496)
T ss_pred HHHHHHHHHHHHHhCCCCcCChh----hEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhhCC
Confidence 577777777777777 5554 46666665 59999999999999999999987776532 122 245
Q ss_pred ceEEEEeceecCC-CCCCCHHHHHHHhh-----hcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccc
Q 018300 222 IYFESMPYRLDES-TGLVDYDMLEKTAI-----LFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 222 ~~~~~~~~~~~~~-~~~iD~d~le~~i~-----~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~ 290 (358)
. ++++++++++ +..+|++++++.++ ..++|+|++..+++| ...+ +++|.++|+++|+.||+|++|+
T Consensus 166 ~--~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~- 242 (496)
T PLN02376 166 V--EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYA- 242 (496)
T ss_pred C--EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCcc-
Confidence 5 4556556532 35789999876532 136787777656655 4555 6678889999999999999976
Q ss_pred cccccC-CccCC--C----C--CC--c--EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 291 GLVAAS-VVADP--F----K--YC--D--VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 291 Gl~~~g-~~~~p--l----~--ga--D--iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.+++.+ .+++. + + +. + +++.|++|.| +|.|.|++++.++
T Consensus 243 ~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~ 296 (496)
T PLN02376 243 ATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 296 (496)
T ss_pred ccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH
Confidence 333332 12211 1 1 11 2 3478999987 7889999998654
No 212
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.50 E-value=3.9e-13 Score=131.46 Aligned_cols=201 Identities=15% Similarity=0.102 Sum_probs=130.3
Q ss_pred ccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCCHH-H
Q 018300 105 LELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSP-A 180 (358)
Q Consensus 105 i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~-~SGt~-A 180 (358)
++|-..+|+ ++|.+.+++...+.. . .+||.. . ..+ .++.+++++|++++ ++.+ ++|+. +
T Consensus 37 i~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~y~~~------~-~~~----lr~~ia~~~~~~~~----~i~~~~~Ga~~~ 99 (361)
T PRK00950 37 IKLGSNENPLGPSPKAVEAIEKELSK-I-HRYPEP------D-APE----LREALSKYTGVPVE----NIIVGGDGMDEV 99 (361)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------C-HHH----HHHHHHHHhCCCHH----HEEEeCCCHHHH
Confidence 555444443 578888888765542 1 234331 1 123 34557888998874 3555 67865 7
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
+..++.++++|||+|+++++.+..+.. .....|.. +..++.+ +++.+|++++++.+.. ++++|++..+
T Consensus 100 i~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~--~~~~~~~-~~~~~~~~~l~~~~~~-~~~~v~~~~p 167 (361)
T PRK00950 100 IDTLMRTFIDPGDEVIIPTPTFSYYEI--------SAKAHGAK--PVYAKRE-EDFSLDVDSVLNAITE-KTKVIFLCTP 167 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCE--EEEeecC-CCCCcCHHHHHHHhcc-CCCEEEEeCC
Confidence 778888889999999998875543211 22344653 4444443 3458999999988753 6888877555
Q ss_pred CC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCc--EEEEcCcCcCc--cCcEEEEEEeCCCCchh
Q 018300 261 AY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCD--VVTTTTHKSLR--GPRGGMIFFKKDPVLGV 334 (358)
Q Consensus 261 ~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaD--iv~~S~hK~L~--Gp~GG~I~~~~~~~~~~ 334 (358)
++ |...+.+++.++|+++|+++++|++|. ++. .......++..| +++.|++|.++ |.|.|++++++
T Consensus 168 ~nptG~~~~~~~l~~l~~~~~~~li~De~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~------ 239 (361)
T PRK00950 168 NNPTGNLIPEEDIRKILESTDALVFVDEAYV-EFA-EYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE------ 239 (361)
T ss_pred CCCCCCCcCHHHHHHHHHHCCcEEEEECchh-hhC-ccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH------
Confidence 54 568899999999999999999999986 333 111111111222 67789999874 56779999876
Q ss_pred HHHHHHhh
Q 018300 335 ELESAINN 342 (358)
Q Consensus 335 ~~~~~i~~ 342 (358)
++.+.+..
T Consensus 240 ~~~~~~~~ 247 (361)
T PRK00950 240 WLIDYYMR 247 (361)
T ss_pred HHHHHHHH
Confidence 45555544
No 213
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.49 E-value=1.5e-12 Score=129.55 Aligned_cols=194 Identities=17% Similarity=0.110 Sum_probs=124.6
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCC-HHHHHHHHHHh
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSG-SPANFEVYTAI 188 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~~SG-t~A~~~a~~al 188 (358)
..+++.+++++...+......+|.. ..|.. ++++.+.+++.+. + ++.+ +|.+++| ++|+..++.++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~---~lr~aia~~~~~~-~~~~~~~----~i~~t~G~~~al~~~~~~l 115 (401)
T TIGR01264 47 LPTDPEVMQAMKDSLDSGKYNGYAP---TVGAL---SAREAIASYYHNP-DGPIEAD----DVVLCSGCSHAIEMCIAAL 115 (401)
T ss_pred CCCCHHHHHHHHHHHhccCCCCCCC---CCCCH---HHHHHHHHHHhhc-CCCCCHH----HEEECcChHHHHHHHHHHh
Confidence 3568889999887665432223422 12332 4444433333321 2 3332 3555655 56999999999
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--C
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 265 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~ 265 (358)
+++||+|+++++.|..+.. .....|. ++.+++++++ +..+|++++++.+.. ++++|++..+++|+ .
T Consensus 116 ~~~gd~v~i~~P~y~~~~~--------~~~~~g~--~v~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~ 184 (401)
T TIGR01264 116 ANAGQNILVPRPGFPLYET--------LAESMGI--EVKLYNLLPDKSWEIDLKQLESLIDE-KTAALIVNNPSNPCGSV 184 (401)
T ss_pred CCCCCEEEEeCCCChhHHH--------HHHHcCC--EEEEeecCCccCCCCCHHHHHHHhcc-CceEEEEcCCCCCCCCC
Confidence 9999999999876554321 2344565 4445445433 457999999987754 67888886667654 4
Q ss_pred C---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CC-C-cEEEEcCcCc--CccCcEEEEEEeC
Q 018300 266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY-C-DVVTTTTHKS--LRGPRGGMIFFKK 328 (358)
Q Consensus 266 ~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~g-a-Div~~S~hK~--L~Gp~GG~I~~~~ 328 (358)
. ++++|+++|+++|+++++|+++. .+...+....++ .. . -+++.|++|+ ++|.|-|++++.+
T Consensus 185 ~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~ 256 (401)
T TIGR01264 185 FSRQHLEEILAVAERQCLPIIADEIYG-DMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHD 256 (401)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEhhhh-hhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecC
Confidence 4 48889999999999999999965 554433211122 11 1 2678999997 4788899999874
No 214
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.49 E-value=1.2e-13 Score=145.13 Aligned_cols=164 Identities=18% Similarity=0.141 Sum_probs=115.0
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 152 LCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 152 ~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
.+++.++++||++.. .+.++||+ +|.+++.++++|||+|++.. ++|.|... .++.++|....++.-.
T Consensus 178 eAq~~AA~~fgAd~t-----yFlvNGTS~gn~a~i~a~~~~Gd~VLvdR---N~HKSv~h----gaLiLsGa~PVYl~P~ 245 (720)
T PRK13578 178 DAQKHAAKVFNADKT-----YFVLNGTSASNKVVTNALLTPGDLVLFDR---NNHKSNHH----GALIQAGATPVYLETA 245 (720)
T ss_pred HHHHHHHHHhCCCce-----EEEeCChhHHHHHHHHHhcCCCCEEEeec---ccHHHHHH----HHHHHcCCeEEEeecc
Confidence 367789999999984 34456665 99999999999999999865 57766211 0245677643333222
Q ss_pred ecCCCC---CCCHHH-----HHHHhhhc--------C-CeEEEE-cCCCCCCCCCHHHHHHH-HHHcCCEEEEecccccc
Q 018300 231 LDESTG---LVDYDM-----LEKTAILF--------R-PKLIIA-GASAYPRDFDYPRMRQI-ADAVGALLMMDMAHISG 291 (358)
Q Consensus 231 ~~~~~~---~iD~d~-----le~~i~~~--------~-~klIi~-~~s~~~~~~dl~~I~~i-a~e~g~~livD~Ah~~G 291 (358)
.++ .| .|+.++ |++.+.++ + .|++++ +++.+|...|+++|+++ ++.++ +|++|+||...
T Consensus 246 ~n~-~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah 323 (720)
T PRK13578 246 RNP-FGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGY 323 (720)
T ss_pred ccc-cCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhh
Confidence 222 22 456544 88877654 2 366655 45557999999999998 78888 99999999976
Q ss_pred ccccCC---cc-CCCC-CCc----EEEEcCcCcCccC-cEEEEEEeCC
Q 018300 292 LVAASV---VA-DPFK-YCD----VVTTTTHKSLRGP-RGGMIFFKKD 329 (358)
Q Consensus 292 l~~~g~---~~-~pl~-gaD----iv~~S~hK~L~Gp-~GG~I~~~~~ 329 (358)
+.+.+. +| ..++ |+| +++.|+||+|++. ++.+|..+++
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~ 371 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDN 371 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCc
Confidence 655442 22 3345 899 9999999999887 4577777654
No 215
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.49 E-value=3.9e-13 Score=131.07 Aligned_cols=154 Identities=24% Similarity=0.278 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH---HHHHh-ccCC----CEEEecCCCCCcccccccccchhccccC
Q 018300 149 LETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE---VYTAI-LKPH----DRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (358)
Q Consensus 149 lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~---a~~al-l~pG----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (358)
+-...++|++++.|.+. +.+|+.+|+++-++ ++.++ -..| ++||+++..||-++. .+.+.
T Consensus 110 li~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA--------SAam~ 177 (496)
T COG1003 110 LIYELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA--------SAAMA 177 (496)
T ss_pred HHHHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh--------hHhhc
Confidence 33346789999999998 68999999975444 44444 2333 578999887776543 22344
Q ss_pred CceEEEEeceecCCCCCCCHHHHHHHhhhcCCe-EEEEcCCCCC-CCCCHHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPK-LIIAGASAYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 221 g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~k-lIi~~~s~~~-~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
| ++++.++.+ ++|.+|+|+|++++.+ ++. +++++++..| ...++.+|+++.+++|..|..|+|...++++ .
T Consensus 178 G--~~VV~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG---~ 250 (496)
T COG1003 178 G--FKVVVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG---L 250 (496)
T ss_pred C--ceEEEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhc---c
Confidence 5 577777777 5789999999999875 554 4555555556 4678999999999999999999998776653 2
Q ss_pred cCCCC-CCcEEEEcCcCcCccCcE
Q 018300 299 ADPFK-YCDVVTTTTHKSLRGPRG 321 (358)
Q Consensus 299 ~~pl~-gaDiv~~S~hK~L~Gp~G 321 (358)
..|-+ |+|++-..+||||+.|.|
T Consensus 251 ~rPGd~G~DV~HlNLHKTF~iPHG 274 (496)
T COG1003 251 ARPGDMGFDVVHLNLHKTFCIPHG 274 (496)
T ss_pred ccccccccceEEeecccccccCCC
Confidence 34556 999999999999977765
No 216
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.48 E-value=2.7e-12 Score=126.05 Aligned_cols=215 Identities=16% Similarity=0.109 Sum_probs=133.8
Q ss_pred hcccccccChHHHHHHHHHHHHh-hhcccccccC--CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKERQ-FKSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~~-~~~i~lias~--n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~ 155 (358)
++.++...++..+..+....... ...++|-.++ ...++.+++++...... .+|+. ..|.+ ++++.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~---~~G~~---~lr~~ia~ 73 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPT---TAGTP---ELREAIVG 73 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCC---ccCCH---HHHHHHHH
Confidence 35677788887777665444332 2445554332 23367788888654321 13432 12333 56666777
Q ss_pred HHHHHcCCC---CCCCcceEEeCCCHH-HHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 156 RALAAFNLD---ENKWGVNVQPLSGSP-ANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 156 ~la~lfg~~---~~~~~v~V~~~SGt~-A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
++.+.+|.+ ++ +|.+++|+. |+..++..+ ++|||+|++.++.|.++.. .+...|. +++.++
T Consensus 74 ~l~~~~~~~~~~~~----~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~ 139 (364)
T PRK07865 74 WLARRRGVTGLDPA----AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV--------GARLAGA--TVVRAD 139 (364)
T ss_pred HHHHHcCCCCCCcc----cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH--------HHHhcCC--EEEecC
Confidence 777776754 43 577788765 777777777 7999999999886655422 2234454 344432
Q ss_pred ecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--
Q 018300 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-- 303 (358)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-- 303 (358)
+++++++ .++++|++..+++| ...+ +++|.++|+++|++|++|++|. .+...+.....+.
T Consensus 140 --------~~~~l~~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~ 206 (364)
T PRK07865 140 --------SLTELGP----QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-ELGWDAEPVSILDPR 206 (364)
T ss_pred --------ChhhCCc----ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-hhccCCCCCcccccc
Confidence 2233322 46888888666665 3444 6788889999999999999976 3443331112111
Q ss_pred ------CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 304 ------YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 304 ------gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.-.+++.|++|.+ +|.|.|+++++++
T Consensus 207 ~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~ 240 (364)
T PRK07865 207 VCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPA 240 (364)
T ss_pred ccCCccceEEEEeechhccCCCceeeEEEecCHH
Confidence 1238899999986 6888999998763
No 217
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.47 E-value=9e-13 Score=129.02 Aligned_cols=193 Identities=18% Similarity=0.126 Sum_probs=128.5
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pG 192 (358)
+++.|++++...+.. . ..||. .|. .+ .++.++++++++++ +|.+++|+ +++..++.+++++|
T Consensus 43 ~~~~v~~a~~~~~~~-~-~~~p~----~g~---~~----lr~~ia~~~~~~~~----~i~~t~G~~~~l~~~~~~~~~~g 105 (359)
T PRK03158 43 PSPKVKEAIAAHLDE-L-ALYPD----GYA---PE----LRTKVAKHLGVDEE----QLLFGAGLDEVIQMISRALLNPG 105 (359)
T ss_pred CCHHHHHHHHHHHHH-h-hcCCC----CcH---HH----HHHHHHHHhCCCHH----HEEECCCHHHHHHHHHHHHhCCC
Confidence 688899998765532 1 11222 121 23 34557788898764 46667766 58888888899999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHH
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPR 270 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~ 270 (358)
|+|++.++.|.++.. .....|..+ ..++++ ++.+|++++++.+.. ++++|++..+++ |...+.++
T Consensus 106 d~v~~~~p~y~~~~~--------~~~~~g~~~--~~~~~~--~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~ 172 (359)
T PRK03158 106 TNTVMAEPTFSQYRH--------NAIIEGAEV--REVPLK--DGGHDLEAMLKAIDE-QTKIVWICNPNNPTGTYVNHEE 172 (359)
T ss_pred CEEEEcCCCHHHHHH--------HHHHcCCeE--EEEecC--CCCcCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHH
Confidence 999999887655321 123446544 444454 457899999887754 788887765565 45788999
Q ss_pred HHHHHHH--cCCEEEEeccccccccccCCccCCC---C--CCcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHh
Q 018300 271 MRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 271 I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl---~--gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
|.++++. +|+++++|++|.. +...+..+..+ + .-.+++.|++|++ +|.|.|++++++ ++.+++.
T Consensus 173 l~~~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~------~~~~~~~ 245 (359)
T PRK03158 173 LLSFLESVPSHVLVVLDEAYYE-YVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE------ELIEKLN 245 (359)
T ss_pred HHHHHHhCCCCcEEEEECchHh-hcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH------HHHHHHH
Confidence 9998887 5999999999763 33222222221 1 2347789999997 477889999876 4556555
Q ss_pred hc
Q 018300 342 NA 343 (358)
Q Consensus 342 ~~ 343 (358)
..
T Consensus 246 ~~ 247 (359)
T PRK03158 246 IA 247 (359)
T ss_pred Hh
Confidence 43
No 218
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.47 E-value=1.9e-12 Score=131.85 Aligned_cols=167 Identities=16% Similarity=0.144 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccc-cCC
Q 018300 148 ELETLCQKRALAAFN----LDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTS 221 (358)
Q Consensus 148 ~lE~~~~~~la~lfg----~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~-~~g 221 (358)
++.+.+.+++.+.+| ++++ +|++++|+. ++..++.++++|||.|++++|.|.++.. .+. ..|
T Consensus 90 ~LR~aiA~~l~~~~~~~~~v~~~----~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g 157 (468)
T PLN02450 90 AFKNALAEFMSEIRGNKVTFDPN----KLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTG 157 (468)
T ss_pred HHHHHHHHHHHHhhCCCCCcChH----HeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCC
Confidence 466666677766666 3443 467777765 8999999999999999999987765422 122 345
Q ss_pred ceEEEEeceecC-CCCCCCHHHHHHHhhh-----cCCeEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEeccccc
Q 018300 222 IYFESMPYRLDE-STGLVDYDMLEKTAIL-----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 222 ~~~~~~~~~~~~-~~~~iD~d~le~~i~~-----~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~ 290 (358)
. +++++++++ ++..+|++++++.+.. .++|+|++..++||+ ..+ +++|.++|+++|++||+|++++
T Consensus 158 ~--~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~- 234 (468)
T PLN02450 158 V--EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYS- 234 (468)
T ss_pred c--EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccc-
Confidence 4 556666653 3347889999887653 368887776666654 444 6778889999999999999965
Q ss_pred cccccC-CccCCCC-----------CCc--EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 291 GLVAAS-VVADPFK-----------YCD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 291 Gl~~~g-~~~~pl~-----------gaD--iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
.+.+.+ .+.+.+. ..+ +++.|++|.+ +|.|.|++++.++
T Consensus 235 ~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~ 289 (468)
T PLN02450 235 GTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDE 289 (468)
T ss_pred ccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCH
Confidence 333332 1111111 011 6788999986 7889999999764
No 219
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.46 E-value=1.1e-12 Score=127.80 Aligned_cols=200 Identities=20% Similarity=0.148 Sum_probs=131.0
Q ss_pred hcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-H
Q 018300 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (358)
Q Consensus 103 ~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~ 179 (358)
.-++|-.+++. +++.+++++.+.+.... .+||.. |. .+ .++.++++++++++ +|.+++|+ +
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~----~~---~~----lr~aia~~~~~~~~----~I~it~G~~~ 88 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP----NA---DA----LRQAIAAYYGLDPE----QVFVGNGSDE 88 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC----cH---HH----HHHHHHHHhCCCHH----HEEEcCCHHH
Confidence 33556555553 47889999877654322 234331 11 12 45567888998774 46677766 5
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
|+..++.++++|||+|++++|.|..+.. .....|. ++.+++++ +++.+|++++++ ..++|++..
T Consensus 89 al~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~-----~~~~v~~~~ 152 (353)
T PRK05387 89 VLAHAFLAFFNHDRPLLFPDITYSFYPV--------YAGLYGI--PYEEIPLD-DDFSIDVEDYLR-----PNGGIIFPN 152 (353)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCHHHHHH--------HHHHcCC--EEEEeecC-CCCCCCHHHHHh-----cCCEEEEeC
Confidence 9999999999999999999886544321 2245565 44455555 346789998864 235666655
Q ss_pred CCC--CCCCCHHHHHHHHHHc-CCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcC--ccCcEEEEEEeCCCCc
Q 018300 260 SAY--PRDFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (358)
Q Consensus 260 s~~--~~~~dl~~I~~ia~e~-g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~ 332 (358)
++| |...+.+++.++++++ ++++++|++|. .+. .......++ .-.+++.|++|++ +|.|.|+++.++
T Consensus 153 P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~-~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~---- 226 (353)
T PRK05387 153 PNAPTGIALPLAEIERILAANPDSVVVIDEAYV-DFG-GESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP---- 226 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc-ccC-CcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH----
Confidence 565 5688999999999886 99999999984 221 111111112 2358899999986 688889999876
Q ss_pred hhHHHHHHhh
Q 018300 333 GVELESAINN 342 (358)
Q Consensus 333 ~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 227 --~~~~~l~~ 234 (353)
T PRK05387 227 --ELIEALNR 234 (353)
T ss_pred --HHHHHHHH
Confidence 55555544
No 220
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.46 E-value=2.6e-12 Score=129.16 Aligned_cols=144 Identities=15% Similarity=0.129 Sum_probs=102.3
Q ss_pred eEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh
Q 018300 171 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL 249 (358)
Q Consensus 171 ~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~ 249 (358)
+|.+++|+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +++++++++ + .+|++++++.++.
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~-g~~~~~l~~~~~~ 210 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN--------MLRYAGF--SASPVSVDA-E-GMQPEKLERALAQ 210 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--eEEeeccCC-C-CCCHHHHHHHHhc
Confidence 46666665 59999999999999999999987765532 2345565 455555653 2 4899999998764
Q ss_pred cCCeEEEEc-CCCCC--CCCCH---HHHHHHHHHc-CCEEEEeccccccccccCCccCCCC---CCcEEEEcCcCcC-cc
Q 018300 250 FRPKLIIAG-ASAYP--RDFDY---PRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL-RG 318 (358)
Q Consensus 250 ~~~klIi~~-~s~~~--~~~dl---~~I~~ia~e~-g~~livD~Ah~~Gl~~~g~~~~pl~---gaDiv~~S~hK~L-~G 318 (358)
++|++++. .++|| ...+. ++|.++|+++ +++|++|.++. .+...+ .+.++. .--+++.|++|++ +|
T Consensus 211 -~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~-~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~G 287 (431)
T PRK15481 211 -GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFA-LLSSSP-YHSVIPQTTQRWALIRSVSKALGPD 287 (431)
T ss_pred -CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchh-hhccCC-CCCCCcCCCCCEEEEeeeccccCCC
Confidence 78888775 55665 45665 4899999999 99999999865 333222 122232 1237889999998 56
Q ss_pred CcEEEEEEeCC
Q 018300 319 PRGGMIFFKKD 329 (358)
Q Consensus 319 p~GG~I~~~~~ 329 (358)
.|-|+++.+++
T Consensus 288 lRiG~~i~~~~ 298 (431)
T PRK15481 288 LRLAFVASDSA 298 (431)
T ss_pred ceeEEEeCCHH
Confidence 67799998763
No 221
>PLN02263 serine decarboxylase
Probab=99.46 E-value=9.1e-12 Score=125.65 Aligned_cols=170 Identities=15% Similarity=0.146 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCCcceEEeCCCHHHHHHHHHHh--ccCCCEEEecCCCCCcccccccccchhccccCCc
Q 018300 146 IDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 146 ~~~lE~~~~~~la~lfg~~~-~~~~v~V~~~SGt~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
..++|+.+-+|++++||.++ ..|| +++++||+||+.++.+. ..+...|++++. +|.+. .|++.+.|.
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~---aH~Sv-----~KAa~llgi 200 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRE---SHYSV-----FKAARMYRM 200 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCC---ccHHH-----HHHHHhcCC
Confidence 45899999999999999975 3354 45678899999988765 223335666553 45442 145567777
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcC--CeEEEE--cCCCCCCCCCHHHHHHHHHHcCC-----EEEEecccccccc
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIA--GASAYPRDFDYPRMRQIADAVGA-----LLMMDMAHISGLV 293 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~--~klIi~--~~s~~~~~~dl~~I~~ia~e~g~-----~livD~Ah~~Gl~ 293 (358)
.+..+ +++ +++.+|+++|++.+.+.+ |-+|+. +.+..|..-|+++|.++|+++|+ +++||+|.+ |..
T Consensus 201 ~~~~V--p~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~G-G~~ 276 (470)
T PLN02263 201 ECVKV--DTL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALF-GLM 276 (470)
T ss_pred cceEe--ccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccch-hhH
Confidence 54444 455 468999999999886543 445544 44456778899999999999997 999999965 443
Q ss_pred ccC-CccCCCC---CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 294 AAS-VVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 294 ~~g-~~~~pl~---gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
..- ....+++ .+|-++.++|||+..|.+ |+++++++
T Consensus 277 lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~ 317 (470)
T PLN02263 277 MPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRME 317 (470)
T ss_pred hhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehh
Confidence 210 0111233 599999999999998976 88888875
No 222
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.46 E-value=2.8e-12 Score=126.42 Aligned_cols=200 Identities=16% Similarity=0.066 Sum_probs=129.5
Q ss_pred cccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHH
Q 018300 106 ELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANF 182 (358)
Q Consensus 106 ~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~ 182 (358)
+|-..++ .+++.+.+++...+... .+|+.. + ..++ ++.++++++++++ +|++++|+. ++.
T Consensus 36 ~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~~----~---~~~L----r~~ia~~~~~~~~----~I~it~G~~~~l~ 98 (369)
T PRK08153 36 RIGANESGFGPSPSVIAAMREAAAEI--WKYGDP----E---NHDL----RHALAAHHGVAPE----NIMVGEGIDGLLG 98 (369)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHh--hcCCCC----c---cHHH----HHHHHHHhCCCHH----HEEEcCCHHHHHH
Confidence 4433343 46888999987654321 234321 1 1234 4457778888764 577788876 777
Q ss_pred HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 018300 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (358)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~ 262 (358)
.++.++++|||.|++.++.|.++.. .+...|. ++++++++. ..+|++++++.+...++|+|++..++|
T Consensus 99 ~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~vp~~~--~~~~~~~l~~~~~~~~~~~i~l~~P~N 166 (369)
T PRK08153 99 LIVRLYVEPGDPVVTSLGAYPTFNY--------HVAGFGG--RLVTVPYRD--DREDLDALLDAARRENAPLVYLANPDN 166 (369)
T ss_pred HHHHHhcCCCCEEEECCCcchHHHH--------HHHHcCC--eEEEeeCCC--CCCCHHHHHHHhcccCCcEEEEeCCCC
Confidence 7788889999999999876654322 1233455 344444542 358999998776555789888865665
Q ss_pred --CCCCCHHHHHHHHHHc--CCEEEEeccccccccccCCccCCCC--C-CcEEEEcCcCcC--ccCcEEEEEEeCCCCch
Q 018300 263 --PRDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (358)
Q Consensus 263 --~~~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~--g-aDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~ 333 (358)
|...+.+++.++++.+ |++|++|+++. .+...+..+ ++. . --+++.|++|++ +|.|.|++++++
T Consensus 167 PtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~-~~~~~~~~~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~----- 239 (369)
T PRK08153 167 PMGSWHPAADIVAFIEALPETTLLVLDEAYC-ETAPAGAAP-PIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP----- 239 (369)
T ss_pred CCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hhcCcccch-hhhhcCCCEEEEecchHhccCcchheeeeecCH-----
Confidence 4577877777776654 89999999975 444333221 222 1 237789999997 578889999976
Q ss_pred hHHHHHHhh
Q 018300 334 VELESAINN 342 (358)
Q Consensus 334 ~~~~~~i~~ 342 (358)
++.+.+..
T Consensus 240 -~~~~~l~~ 247 (369)
T PRK08153 240 -GTIKAFDK 247 (369)
T ss_pred -HHHHHHHH
Confidence 45555444
No 223
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.46 E-value=2e-12 Score=127.37 Aligned_cols=203 Identities=19% Similarity=0.151 Sum_probs=130.8
Q ss_pred ccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HH
Q 018300 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (358)
Q Consensus 105 i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~ 181 (358)
++|-..+| .+++.+.+++...... ...|+.. .| +. .++.+++++|++.+ +|.+++|+. ++
T Consensus 39 i~l~~~~~~~~~~~~~~~al~~~~~~--~~~Y~~~---~g----~~----lr~~ia~~~~~~~~----~i~~t~G~~~~l 101 (371)
T PRK05166 39 AKLGSNENPLGPSPAVRRAFADIAEL--LRLYPDP---QG----RA----LREAIAARTGVPAD----RIILGNGSEDLI 101 (371)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHH--hhcCCCC---cH----HH----HHHHHHHHhCcCHH----HEEEcCCHHHHH
Confidence 44443333 4688888888754322 1234321 11 12 34557788898764 566777765 88
Q ss_pred HHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 018300 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (358)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~ 261 (358)
..++.+++++||+|++.++.|..+.. .+...|.. +.++++++ ++.+|++++++.++. ++|+|++..++
T Consensus 102 ~~~~~~~~~~gd~vli~~P~y~~~~~--------~~~~~g~~--~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~p~ 169 (371)
T PRK05166 102 AVICRAVLRPGDRVVTLYPSFPLHED--------YPTMMGAR--VERVTVTP-DLGFDLDALCAAVAR-APRMLMFSNPS 169 (371)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCe--EEEeecCC-CCCCCHHHHHHhhhc-CCCEEEEeCCC
Confidence 88888889999999998876654321 22345654 44555553 468899999998764 68988876666
Q ss_pred CC--CCCCHHHHHHHHHH--cCCEEEEeccccccccccCCccCCC---C--C-CcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 262 YP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--Y-CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 262 ~~--~~~dl~~I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl---~--g-aDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+| ...+.+++.++++. .++++++|+++. .+...+..++.+ + + --+++.|++|.+ +|.|.|+++..++
T Consensus 170 NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~ 248 (371)
T PRK05166 170 NPVGSWLTADQLARVLDATPPETLIVVDEAYA-EYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP 248 (371)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEECcHH-HhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH
Confidence 54 57787777776664 378999999965 344322222222 1 1 127789999996 7889999887554
Q ss_pred CCchhHHHHHHhh
Q 018300 330 PVLGVELESAINN 342 (358)
Q Consensus 330 ~~~~~~~~~~i~~ 342 (358)
++.+.+..
T Consensus 249 -----~l~~~~~~ 256 (371)
T PRK05166 249 -----ELVGLLDR 256 (371)
T ss_pred -----HHHHHHHH
Confidence 56555544
No 224
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.45 E-value=3.6e-12 Score=126.68 Aligned_cols=195 Identities=20% Similarity=0.160 Sum_probs=126.8
Q ss_pred CCcHHHHHHHhhhhhccc--CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCC-HHHHHHHHHH
Q 018300 113 FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG-SPANFEVYTA 187 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~--~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SG-t~A~~~a~~a 187 (358)
.+++.+.+++...+.... ..+|+. ..|. ..+++.+.+++...++. +++ +|.+++| ++++..++.+
T Consensus 46 ~~~~~v~~a~~~~~~~~~~~~~~y~~---~~g~---~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~~~al~~~~~~ 115 (394)
T PRK06836 46 PPPAAVKEALRELAEEEDPGLHGYMP---NAGY---PEVREAIAESLNRRFGTPLTAD----HIVMTCGAAGALNVALKA 115 (394)
T ss_pred CCCHHHHHHHHHHHhcCCcCcccCCC---CCCC---HHHHHHHHHHHHHHhCCCCCcC----cEEEeCChHHHHHHHHHH
Confidence 357889998876654321 112211 1222 34555555555544443 443 3555555 5699999999
Q ss_pred hccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CC
Q 018300 188 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RD 265 (358)
Q Consensus 188 ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~ 265 (358)
+++|||+|+++++.+.++.. .....|. ++.+++.+++++.+|++++++.++. ++++|++..+++| ..
T Consensus 116 l~~~gd~Vli~~p~~~~~~~--------~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~ 184 (394)
T PRK06836 116 ILNPGDEVIVFAPYFVEYRF--------YVDNHGG--KLVVVPTDTDTFQPDLDALEAAITP-KTKAVIINSPNNPTGVV 184 (394)
T ss_pred hcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEEecCCccCcCCHHHHHhhcCc-CceEEEEeCCCCCCCcC
Confidence 99999999999886655422 2234465 4555556655568999999998864 7898887666664 45
Q ss_pred CC---HHHHHHHHHH------cCCEEEEeccccccccccCC-ccCCCC--CCcEEEEcCcCcCc--cCcEEEEEEeCC
Q 018300 266 FD---YPRMRQIADA------VGALLMMDMAHISGLVAASV-VADPFK--YCDVVTTTTHKSLR--GPRGGMIFFKKD 329 (358)
Q Consensus 266 ~d---l~~I~~ia~e------~g~~livD~Ah~~Gl~~~g~-~~~pl~--gaDiv~~S~hK~L~--Gp~GG~I~~~~~ 329 (358)
.+ +++|.++|++ +|+++++|+++. .+...+. .+..+. .-.+++.|++|.|+ |.|-|+++.+++
T Consensus 185 ~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~ 261 (394)
T PRK06836 185 YSEETLKALAALLEEKSKEYGRPIYLISDEPYR-EIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPE 261 (394)
T ss_pred CCHHHHHHHHHHHHHhhhccCCCeEEEEecccc-ccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHH
Confidence 55 6777788998 899999999865 4443332 111122 23588899999874 667899998764
No 225
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.45 E-value=4.9e-13 Score=131.75 Aligned_cols=193 Identities=8% Similarity=-0.011 Sum_probs=119.7
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eCCCHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSPANF 182 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~-~~SGt~A~~ 182 (358)
...++|++..+++.|++++......-. +.+ +.+.++.+.+++ +++.++++||++.+ +.+ ++ ..|||.++.
T Consensus 4 ~~~f~pGP~~~~~~v~~a~~~~~~~~~---~~~---hr~~~f~~~~~~-~r~~l~~l~~~~~~-~~v-~f~~gs~T~a~~ 74 (361)
T TIGR01366 4 DGRFGSGPSKVRLEQLQALTTTAASLF---GTS---HRQAPVKNLVGR-VREGLAELFSLPDG-YEV-ILGNGGATAFWD 74 (361)
T ss_pred CCcccCCCcCCCHHHHHHHHhcCcccc---ccC---cCChHHHHHHHH-HHHHHHHHhCCCCC-ceE-EEECCchhHHHH
Confidence 346789999999999999874210000 112 234567777776 89999999999542 212 33 356899999
Q ss_pred HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC--
Q 018300 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-- 260 (358)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s-- 260 (358)
+++.+++.+ +.+++...+++..+.|.. +...+.+ .++.+++ + +...++.+ +. .++|+|.+.+.
T Consensus 75 ~~~~~l~~~-~~l~i~~G~~~~~~~~~a----~~~~~~~-~~~~~~~--~-~~~~~~~~-----~~-~~~~lV~~~h~et 139 (361)
T TIGR01366 75 AATFGLIEK-KSLHLSFGEFSSKFAKAV----KLAPWLG-EPIIVTA--D-PGSAPEPQ-----AD-PGVDVIAWAHNET 139 (361)
T ss_pred HHHHhcccc-cccEEecCHHHHHHHHHH----HhhhccC-CceEEec--C-CCCCCCCc-----cC-CCCCEEEEcccCC
Confidence 999998743 333333333333222211 1111112 2344443 2 23344432 22 36888877543
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeC
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKK 328 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~ 328 (358)
++|...|+++| ++++|+++++|++|++|.. +..++.+|++++|.||+|++|.| ++++.++
T Consensus 140 ~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~-----~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~ 200 (361)
T TIGR01366 140 STGVAVPVRRP---EGSDDALVVIDATSGAGGL-----PVDIAETDVYYFAPQKNFASDGGLWLAIMSP 200 (361)
T ss_pred ccceecccccc---cccCCCeEEEEcCccccCC-----CCCHHHCCEEEEEchhhcCCCCceEEEEECH
Confidence 46788898887 5899999999999998864 22333689999999999988766 3334455
No 226
>PRK09105 putative aminotransferase; Provisional
Probab=99.45 E-value=3e-12 Score=126.45 Aligned_cols=190 Identities=17% Similarity=0.111 Sum_probs=126.5
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~p 191 (358)
.+++.+++++...+... ..||. ....++ ++.+++++|++++ +|.+++|+ +++..++.++++|
T Consensus 56 ~~~~~~~~a~~~~~~~~--~~Y~~-------~~~~~L----r~aia~~~~v~~e----~I~it~Gs~~ai~~~~~~l~~~ 118 (370)
T PRK09105 56 GPSPAARDAAARSAALS--GRYDL-------ELEDDL----RTLFAAQEGLPAD----HVMAYAGSSEPLNYAVLAFTSP 118 (370)
T ss_pred CCCHHHHHHHHHHHHHh--cCCCC-------chHHHH----HHHHHHHhCcChh----hEEEcCChHHHHHHHHHHHcCC
Confidence 46889999987765321 12322 112233 4457788899875 46666665 5999999999999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHH
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYP 269 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~ 269 (358)
||+|+++++.|.++.. .+...|.. ++.++.++ ++.+|++++++. . .++++|++..++|| ...+.+
T Consensus 119 gd~Vli~~P~y~~~~~--------~~~~~g~~--~~~v~~~~-~~~~d~~~l~~~-~-~~~~~v~l~nP~NPTG~~~~~~ 185 (370)
T PRK09105 119 TAGLVTADPTYEAGWR--------AADAQGAP--VAKVPLRA-DGAHDVKAMLAA-D-PNAGLIYICNPNNPTGTVTPRA 185 (370)
T ss_pred CCEEEEeCCChHHHHH--------HHHHcCCe--EEEecCCC-CCCCCHHHHHhc-C-CCCCEEEEeCCCCCCCcCcCHH
Confidence 9999999987765522 23455654 44444553 467899999876 3 36788877666664 577878
Q ss_pred HHHHHHHH--cCCEEEEeccccccccccCCccCCCC----CCc-EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHH
Q 018300 270 RMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAI 340 (358)
Q Consensus 270 ~I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl~----gaD-iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i 340 (358)
++.++++. +|+++++|++|. .+.. .++..+ +.+ +++.|++|++ +|.|-|++++++ ++.+++
T Consensus 186 ~l~~l~~~~~~~~~lIvDEaY~-~f~~---~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~------~~i~~l 255 (370)
T PRK09105 186 DIEWLLANKPAGSVLLVDEAYI-HFSD---APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP------DLLAKL 255 (370)
T ss_pred HHHHHHHhCCCCcEEEEECchH-Hhcc---CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH------HHHHHH
Confidence 88777654 489999999974 2221 122121 344 5667999996 677889999876 455555
Q ss_pred hh
Q 018300 341 NN 342 (358)
Q Consensus 341 ~~ 342 (358)
..
T Consensus 256 ~~ 257 (370)
T PRK09105 256 AR 257 (370)
T ss_pred Hh
Confidence 44
No 227
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.45 E-value=3.6e-12 Score=125.83 Aligned_cols=202 Identities=13% Similarity=0.079 Sum_probs=127.1
Q ss_pred CCcHHHHHHHhhhhhccc-CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC----CCCCCCcceEEeCCCHH-HHHHHHH
Q 018300 113 FTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNVQPLSGSP-ANFEVYT 186 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~-~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg----~~~~~~~v~V~~~SGt~-A~~~a~~ 186 (358)
.+|+.+++++.+.+.... ..+||. .|.. ++++...+++.+.++ ++++ +|.+++|+. |+..++.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~Y~~----~G~~---~Lr~aia~~~~~~~~~~~~v~~~----~I~it~Ga~~al~~~~~ 109 (374)
T PRK02610 41 DLPPDLKQKLAWLYQQGIESNRYPD----GGHE---ALKQAIAEYVNESAAGSSQITPA----NISVGNGSDELIRSLLI 109 (374)
T ss_pred CCCHHHHHHHHHHHhhcccccCCCC----CchH---HHHHHHHHHhCccccccCCCCHH----HEEEcCChHHHHHHHHH
Confidence 478899999987655422 123442 2322 455444333333321 4443 577788875 7777788
Q ss_pred HhccCCC-EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---cCCeEEEEcCCCC
Q 018300 187 AILKPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAY 262 (358)
Q Consensus 187 all~pGD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---~~~klIi~~~s~~ 262 (358)
+++.+|| +|++.+|.|.++.. .+...|. +++.+++++++..+|++++++.+.. .++|+|++..++|
T Consensus 110 ~~~~~g~~~Vlv~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~N 179 (374)
T PRK02610 110 ATCLGGEGSILVAEPTFSMYGI--------LAQTLGI--PVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNS 179 (374)
T ss_pred HHcCCCCCeEEEcCCChHHHHH--------HHHHcCC--EEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCC
Confidence 8888886 89999887655422 2345565 4455556654568999999988764 5789988766676
Q ss_pred C--CCCCHHHHHHHHHH-cCCEEEEeccccccccccCCccCCCCCC--cEEEEcCcCcC--ccCcEEEEEEeCCCCchhH
Q 018300 263 P--RDFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPFKYC--DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVE 335 (358)
Q Consensus 263 ~--~~~dl~~I~~ia~e-~g~~livD~Ah~~Gl~~~g~~~~pl~ga--Div~~S~hK~L--~Gp~GG~I~~~~~~~~~~~ 335 (358)
| ...+.+++.++++- +|++||+|+++. .+.... ....+... -+++.|++|++ +|.|.|++++++ +
T Consensus 180 PTG~~~s~~~l~~l~~~~~~~~iI~De~Y~-~~~~~~-~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~------~ 251 (374)
T PRK02610 180 PTGNPLTAAELEWLRSLPEDILVVIDEAYF-EFSQTT-LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP------E 251 (374)
T ss_pred CCCCCCCHHHHHHHHhccCCcEEEEecccc-ccCccc-hHHHHhcCCCEEEEEecchhccCcccceeeeecCH------H
Confidence 5 46666665555431 489999999975 332111 11112211 27789999997 788999999876 4
Q ss_pred HHHHHhhc
Q 018300 336 LESAINNA 343 (358)
Q Consensus 336 ~~~~i~~~ 343 (358)
+.+++...
T Consensus 252 l~~~l~~~ 259 (374)
T PRK02610 252 LIAVLEKV 259 (374)
T ss_pred HHHHHHHh
Confidence 55555443
No 228
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.44 E-value=2.7e-12 Score=130.38 Aligned_cols=167 Identities=19% Similarity=0.198 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEE
Q 018300 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (358)
.+.+.+.+++....|..-. . -+|+.++|++ |+..+...+++|||+|++-+|.|.+... .....|. ++
T Consensus 136 ~LR~~ia~~l~~~~g~~~~-~-~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~--------~~~~~g~--~~ 203 (459)
T COG1167 136 ELREAIAAYLLARRGISCE-P-EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ--------ALEALGA--RV 203 (459)
T ss_pred HHHHHHHHHHHHhcCCccC-c-CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCC--cE
Confidence 5666666666655566532 2 2677888886 9999999999999999998876544322 3345565 55
Q ss_pred EeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CC--CCCCH---HHHHHHHHHcCCEEEEeccccccccccCCccC
Q 018300 227 MPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YP--RDFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (358)
Q Consensus 227 ~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~--~~~dl---~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~ 300 (358)
+++++| ..-+|+|+|++.+...++|++++.++. || ...+. ++|.++|++||+++|.|..+. -+.+.+..+.
T Consensus 204 ~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~-el~~~~~p~~ 280 (459)
T COG1167 204 IPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYG-ELRYDGPPPP 280 (459)
T ss_pred EecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcch-hhhcCCCCCC
Confidence 666666 357899999999887789999886543 54 45554 579999999999999999754 4444433333
Q ss_pred CCCC-----CcEEEEcCcCcC-ccCcEEEEEEeCC
Q 018300 301 PFKY-----CDVVTTTTHKSL-RGPRGGMIFFKKD 329 (358)
Q Consensus 301 pl~g-----aDiv~~S~hK~L-~Gp~GG~I~~~~~ 329 (358)
++.. ==+++.|++|+| +|.|.|+|+..++
T Consensus 281 ~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~ 315 (459)
T COG1167 281 PLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE 315 (459)
T ss_pred ChHhhCCCCCEEEEeeehhhcccccceeeeeCCHH
Confidence 3331 127899999997 7889999999885
No 229
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.44 E-value=2.2e-12 Score=127.22 Aligned_cols=203 Identities=18% Similarity=0.149 Sum_probs=132.0
Q ss_pred hcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-H
Q 018300 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (358)
Q Consensus 103 ~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~ 179 (358)
..+.|-..+|. +++.+++++...+.+.. .||. .|. .+ .++.+++++|++++ +|.+++|+ +
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~----~g~---~~----Lr~aia~~~~~~~~----~I~vt~Gs~e 92 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPD----GGA---TT----LRQTIANKLHVKME----QVLCGSGLDE 92 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCC----CCH---HH----HHHHHHHHhCCCcc----eEEECCCHHH
Confidence 34555555554 68889999887654321 2332 122 12 34557788899875 56677776 5
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
++..++.++++|||+|++.+|.|.++.. .....|.. +.+++++ ++.+|++++++.++. ++|+|++..
T Consensus 93 ~i~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~~--v~~v~~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (366)
T PRK01533 93 VIQIISRAVLKAGDNIVTAGATFPQYRH--------HAIIEGCE--VKEVALN--NGVYDLDEISSVVDN-DTKIVWICN 159 (366)
T ss_pred HHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCCE--EEEeecC--CCCcCHHHHHHHhCc-CCcEEEEeC
Confidence 8899999999999999999886655422 23455654 4444454 346999999988754 688888766
Q ss_pred CCCC--CCCCHHHHHHHH---HHcCCEEEEeccccccccccCCccCCC---C--CCcEEEEcCcCcC--ccCcEEEEEEe
Q 018300 260 SAYP--RDFDYPRMRQIA---DAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 260 s~~~--~~~dl~~I~~ia---~e~g~~livD~Ah~~Gl~~~g~~~~pl---~--gaDiv~~S~hK~L--~Gp~GG~I~~~ 327 (358)
++|| ...+.+++.+++ ++++ ++++|+++. .+...+..+..+ + .--+++.|++|++ +|.|.|+++++
T Consensus 160 P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~ 237 (366)
T PRK01533 160 PNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH 237 (366)
T ss_pred CCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC
Confidence 6665 567766655555 4445 677899976 544332212212 2 1237889999986 67888999987
Q ss_pred CCCCchhHHHHHHhhc
Q 018300 328 KDPVLGVELESAINNA 343 (358)
Q Consensus 328 ~~~~~~~~~~~~i~~~ 343 (358)
+ ++.+++...
T Consensus 238 ~------~~~~~l~~~ 247 (366)
T PRK01533 238 E------ELIEKLNVV 247 (366)
T ss_pred H------HHHHHHHHh
Confidence 5 566666543
No 230
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=4.9e-12 Score=123.88 Aligned_cols=204 Identities=16% Similarity=0.136 Sum_probs=129.2
Q ss_pred cccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HH
Q 018300 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (358)
Q Consensus 104 ~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A 180 (358)
-++|-..+| .+++.+.+++.+.+.. ..+||. .|. .++ ++.++++++++++ +|.+++|+ +|
T Consensus 32 ~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~----~~~---~~l----r~~ia~~~~~~~~----~I~it~G~~~a 94 (357)
T PRK14809 32 LVKLSSNENPHGPSPAAVEAIREAAER--VHSYPK----ASH---ADL----TAALADRWDVSPE----QVWLANGGDGA 94 (357)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCC----CCH---HHH----HHHHHHHhCCCcc----eEEECCCHHHH
Confidence 355544444 4688888988776542 234543 121 233 4456778888875 56677776 58
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
+..++.++++|||+|++.+|.|..+.. .....|..+..++ ++.+ +..+|.+++++.. .++|+|++..
T Consensus 95 l~~~~~~~~~~gd~V~v~~P~y~~~~~--------~~~~~g~~~~~~~--l~~~~~~~~~~~~~~~~~--~~~k~i~l~~ 162 (357)
T PRK14809 95 LDYLARAMLDPGDTVLVPDPGFAYYGM--------SARYHHGEVREYP--VSKADDFEQTADTVLDAY--DGERIVYLTS 162 (357)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCCeEEEEe--cccCcCCCcCHHHHHHhh--cCCcEEEEeC
Confidence 999999999999999999886543211 2234565444444 4332 3467888877654 2578888876
Q ss_pred CCCC--CCCCHHHHHHHHHHc--CCEEEEeccccccccccCCccCCCCCC-c-EEEEcCcCcC--ccCcEEEEEEeCCCC
Q 018300 260 SAYP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYC-D-VVTTTTHKSL--RGPRGGMIFFKKDPV 331 (358)
Q Consensus 260 s~~~--~~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~ga-D-iv~~S~hK~L--~Gp~GG~I~~~~~~~ 331 (358)
++|| ...+.+++.++++.+ +++|++|+++. .+...+....-++.. . +++.|++|++ +|.|-|++++++
T Consensus 163 p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--- 238 (357)
T PRK14809 163 PHNPTGSEIPLDEVEALAERTDEETLVVVDEAYG-EFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--- 238 (357)
T ss_pred CCCCCCcCCCHHHHHHHHHhCccCcEEEEechhh-hccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH---
Confidence 7765 577877777776654 78999999976 333221100011112 2 6678999997 578889999987
Q ss_pred chhHHHHHHhhc
Q 018300 332 LGVELESAINNA 343 (358)
Q Consensus 332 ~~~~~~~~i~~~ 343 (358)
++.+++...
T Consensus 239 ---~~~~~~~~~ 247 (357)
T PRK14809 239 ---EWADAYARV 247 (357)
T ss_pred ---HHHHHHHHh
Confidence 455555543
No 231
>PRK05839 hypothetical protein; Provisional
Probab=99.44 E-value=1.1e-11 Score=122.50 Aligned_cols=189 Identities=15% Similarity=0.114 Sum_probs=120.4
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCCHH-HHHHHHHHhc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGSP-ANFEVYTAIL 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SGt~-A~~~a~~all 189 (358)
.+++.+.+++..... ....|+. ..|.. ++.+..++++++.+|. +++ +|++++|+. |+..++.+++
T Consensus 37 ~~~~~~~~a~~~~~~--~~~~Y~~---~~G~~---~lr~aia~~l~~~~g~~~~~~----~I~it~G~~~al~~~~~~~~ 104 (374)
T PRK05839 37 ETPKFIQDALKNNAH--LLNKYPK---SAGEE---SLREAQRGFFKRRFKIELKEN----ELIPTFGTREVLFNFPQFVL 104 (374)
T ss_pred CCCHHHHHHHHHHhh--ccCCCCC---CCCCH---HHHHHHHHHHHHHhCCCCCcc----eEEEecCcHHHHHHHHHHHh
Confidence 457888888775432 1223443 12332 4666667777787774 443 677888876 7777777764
Q ss_pred --cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--
Q 018300 190 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYPR-- 264 (358)
Q Consensus 190 --~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~le~~i~~~~~klIi~~~s~~~~-- 264 (358)
++||.|++++|.|..+.. .+...|. +++++++++++ ..+|.++.+ + .++|+|++..++||+
T Consensus 105 ~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v~i~nP~NPTG~ 170 (374)
T PRK05839 105 FDKQNPTIAYPNPFYQIYEG--------AAIASRA--KVLLMPLTKENDFTPSLNEKE--L--QEVDLVILNSPNNPTGR 170 (374)
T ss_pred cCCCCCEEEECCCCchhhHH--------HHHhcCC--EEEEeecccccCCcCCcchhh--h--ccccEEEEeCCCCCcCc
Confidence 589999999886655422 2234565 55566665433 356655432 2 268988887677654
Q ss_pred CCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--------CCc--EEEEcCcCc--CccCcEEEEEEeC
Q 018300 265 DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--------YCD--VVTTTTHKS--LRGPRGGMIFFKK 328 (358)
Q Consensus 265 ~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--------gaD--iv~~S~hK~--L~Gp~GG~I~~~~ 328 (358)
..+ +++|+++|+++|++|++|+++. .+...+..++.+. ..+ +++.|++|. ++|.|.|++++++
T Consensus 171 ~~s~~~l~~i~~~~~~~~~~ii~DE~Y~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~ 248 (374)
T PRK05839 171 TLSLEELIEWVKLALKHDFILINDECYS-EIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA 248 (374)
T ss_pred ccCHHHHHHHHHHHHHcCCEEEeccchh-hcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH
Confidence 444 6778888999999999999965 3432222222111 112 778999997 4788999999876
No 232
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.43 E-value=4.1e-12 Score=124.59 Aligned_cols=201 Identities=15% Similarity=0.148 Sum_probs=124.2
Q ss_pred ccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HH
Q 018300 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (358)
Q Consensus 105 i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~ 181 (358)
++|-..+| .+|+.+++++.+.+... ..||.. + ..+ .|+.++++++++++ +|.+++|+. ++
T Consensus 23 i~l~~~~~~~~~p~~~~~a~~~~~~~~--~~y~~~----~---~~~----lr~~ia~~~~~~~~----~i~it~Ga~~~l 85 (356)
T PRK08056 23 LDFSANINPLGMPVSLKRAIIDNLDCA--ERYPDV----E---YRH----LHQALARHHQVPAS----WILAGNGETESI 85 (356)
T ss_pred EEeccccCCCCCCHHHHHHHHHHHHhc--ccCcCc----c---HHH----HHHHHHHHhCcChh----hEEECCCHHHHH
Confidence 55544455 47889999997765421 234321 1 122 45567888999874 466777765 88
Q ss_pred HHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC-CCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-LVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~iD~d~le~~i~~~~~klIi~~~s 260 (358)
..++.++ .+||. ++.++.+..+. ..+...|. ++++++++++++ .+| +++++.+. .++|+|++..+
T Consensus 86 ~~~~~~l-~~g~v-iv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l~~p 151 (356)
T PRK08056 86 FAVVSGL-KPRRA-MIVTPGFAEYR--------RALQQVGC--EIRRYSLREADGWQLT-DAILEALT-PDLDCLFLCTP 151 (356)
T ss_pred HHHHHHh-CCCCE-EEeCCCcHHHH--------HHHHHcCC--eEEEEecccccCCCcc-HHHHHhcc-CCCCEEEEeCC
Confidence 8777775 78874 55555433221 12345565 445555554333 556 34445454 47898888766
Q ss_pred CCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCC-ccCCCC--CCcEEEEcCcCcC--ccCcEEEEEEeCCC
Q 018300 261 AYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (358)
Q Consensus 261 ~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~pl~--gaDiv~~S~hK~L--~Gp~GG~I~~~~~~ 330 (358)
++| ...+ +++|+++|+++|+++++|+++. ++...+. ....+. ...+++.|++|++ +|.|.|+++..++
T Consensus 152 ~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~- 229 (356)
T PRK08056 152 NNPTGLLPERQLLQAIAERCKSLNIALILDEAFI-DFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD- 229 (356)
T ss_pred cCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchh-ccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCH-
Confidence 665 4666 7888999999999999999964 4432221 111222 3458899999986 5678899998543
Q ss_pred CchhHHHHHHhh
Q 018300 331 VLGVELESAINN 342 (358)
Q Consensus 331 ~~~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 230 ----~~~~~l~~ 237 (356)
T PRK08056 230 ----AAVARMRR 237 (356)
T ss_pred ----HHHHHHHH
Confidence 44445543
No 233
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.43 E-value=2.8e-12 Score=127.46 Aligned_cols=225 Identities=16% Similarity=0.163 Sum_probs=131.7
Q ss_pred ccccChHHHHHHHHHHHH--hhhccccccc----CC-CCc--HHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHH
Q 018300 83 LGEADPEVCEIITKEKER--QFKSLELIAS----EN-FTS--RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (358)
Q Consensus 83 l~~~d~~~~~~i~~e~~~--~~~~i~lias----~n-~~s--~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~ 153 (358)
+...+++.+..+..+..+ ....++|--+ +. .++ +.+.+++...+......+|+. ..|.+ ++.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~---~~G~~---~lR~ai 78 (396)
T PRK09257 5 LEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLP---IEGLA---AYRQAV 78 (396)
T ss_pred CCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCC---CCCCH---HHHHHH
Confidence 444555444334443333 2244555432 22 233 678888776554322223433 23443 455555
Q ss_pred HHHHHHHcCC--CCCCCcceEEeCCCH-HHHHHHHHHh--ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEe
Q 018300 154 QKRALAAFNL--DENKWGVNVQPLSGS-PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (358)
Q Consensus 154 ~~~la~lfg~--~~~~~~v~V~~~SGt-~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~ 228 (358)
.+++.+..+. ++++ +.|+.++|+ +|+..++.++ ++|||+|++.+|.|.++.. .+...|.. +++
T Consensus 79 a~~~~~~~~~~~~~~~--i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~--------~~~~~g~~--~v~ 146 (396)
T PRK09257 79 QELLFGADSPALAAGR--VATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA--------IFEAAGLE--VKT 146 (396)
T ss_pred HHHhcCCCCcccccCe--EEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH--------HHHHcCCc--EEE
Confidence 5555443332 3321 123566665 5888887655 5899999999987766532 23455654 445
Q ss_pred cee-cCCCCCCCHHHHHHHhhhcCC--eEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEecccccccccc-CC-c
Q 018300 229 YRL-DESTGLVDYDMLEKTAILFRP--KLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAA-SV-V 298 (358)
Q Consensus 229 ~~~-~~~~~~iD~d~le~~i~~~~~--klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~-~ 298 (358)
+++ +++++.+|++++++.++..++ +++++..++||+ ..+ +++|+++|+++|+++++|.++. ++... +. .
T Consensus 147 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~ 225 (396)
T PRK09257 147 YPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQ-GFGDGLEEDA 225 (396)
T ss_pred EeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc-ccccchHHHH
Confidence 544 334468999999988764333 455556666664 333 7788999999999999999864 44432 11 1
Q ss_pred cC--CCC-CC--cEEEEcCcCcC--ccCcEEEEEE
Q 018300 299 AD--PFK-YC--DVVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 299 ~~--pl~-ga--Div~~S~hK~L--~Gp~GG~I~~ 326 (358)
+. .+. .. -+++.|++|++ +|.|-|+++.
T Consensus 226 ~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 226 YGLRAFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred HHHHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 11 111 11 27789999997 4888899874
No 234
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.42 E-value=1.9e-12 Score=124.86 Aligned_cols=207 Identities=19% Similarity=0.211 Sum_probs=146.2
Q ss_pred hcccccccCCCC----cHHHHHHHhhhhhcccCCCCCCCcCCCCcH-HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC
Q 018300 103 KSLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (358)
Q Consensus 103 ~~i~lias~n~~----s~~V~~al~~~l~~~~~~G~pg~r~~~G~~-~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG 177 (358)
+.+.++.|+.|. +|.|++|+...+. +|..|-.|.|...|+. ...++|++ ++++.+-+.+ ++++|.
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~-~hG~GAGGTRNIsG~s~~hv~LE~e----LA~LHqK~aA-----LlFsSC 240 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLD-RHGAGAGGTRNISGHSKHHVRLEAE----LADLHQKEAA-----LLFSSC 240 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHH-HcCCCcCCccccCCCCchhhhHHHH----HHHHhcCcce-----eeeeee
Confidence 556677888875 8999999988764 5556777888777764 44456654 7888877763 667899
Q ss_pred HHHHHHHHHHh--ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc---CC
Q 018300 178 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RP 252 (358)
Q Consensus 178 t~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~---~~ 252 (358)
..||...+..| .-||-+|......|.+. . ..+.-++. .-.-+ ..-|+++|++++... .|
T Consensus 241 fVANDstLftLak~lpgcei~SD~gNHASM------I--~GIrns~v--~K~IF------rHND~~hL~~lL~~~~~svP 304 (570)
T KOG1360|consen 241 FVANDSTLFTLAKKLPGCEIFSDEGNHASM------I--QGIRNSRV--PKHIF------RHNDLDHLEQLLQSSPKSVP 304 (570)
T ss_pred eeccchHHHHHHHHCCCcEEeccccchHHH------H--HHhhhcCC--cceee------ccCCHHHHHHHHHhCCCCCC
Confidence 99999999887 45898888765433221 1 12222222 11222 245889999888653 47
Q ss_pred eEEEEc--CCCCCCCCCHHHHHHHHHHcCCEEEEecccccccccc---CC--ccCCCCCCcEEEEcCcCcCccCcEEEEE
Q 018300 253 KLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIF 325 (358)
Q Consensus 253 klIi~~--~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~---g~--~~~pl~gaDiv~~S~hK~L~Gp~GG~I~ 325 (358)
|+|.++ +|..|.++|+++|+++|+|||++.++|+.|++|+.+. |. .+..+...|++++++-|+|+ --||+|.
T Consensus 305 KivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafG-cVGGYIA 383 (570)
T KOG1360|consen 305 KIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFG-CVGGYIA 383 (570)
T ss_pred ceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcc-cccceeh
Confidence 888875 3456789999999999999999999999999998753 22 22223368999999999874 4688888
Q ss_pred EeCCCCchhHHHHHHhh
Q 018300 326 FKKDPVLGVELESAINN 342 (358)
Q Consensus 326 ~~~~~~~~~~~~~~i~~ 342 (358)
... ++.+-+++
T Consensus 384 at~------~LvDmiRS 394 (570)
T KOG1360|consen 384 ATR------KLVDMIRS 394 (570)
T ss_pred hhh------hHHHHHHH
Confidence 877 45555554
No 235
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.42 E-value=1.1e-11 Score=121.61 Aligned_cols=192 Identities=16% Similarity=0.096 Sum_probs=118.0
Q ss_pred hccccccc--CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCCH-
Q 018300 103 KSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS- 178 (358)
Q Consensus 103 ~~i~lias--~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~-~~~~~v~V~~~SGt- 178 (358)
.-++|-.+ ..++++.+.+++.+... ..+|+. ..|.. ++++.+++++.+.+|.+ .+ . -+|.+++|+
T Consensus 22 ~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~---~~G~~---~lr~~ia~~~~~~~~~~~~~-~-~~I~it~G~~ 90 (357)
T TIGR03539 22 GIVDLSVGTPVDPVPPLIRAALAAAAD---APGYPQ---TWGTP---ELREAIVDWLERRRGVPGLD-P-TAVLPVIGTK 90 (357)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHh---hCCCCc---ccCCH---HHHHHHHHHHHHhcCCCCCC-c-CeEEEccChH
Confidence 33455433 33557888888765432 123443 12332 46666667777766644 21 1 256677775
Q ss_pred HHHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEE
Q 018300 179 PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (358)
Q Consensus 179 ~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~ 257 (358)
+|+..++..+ ++|||.|++.++.|.++.. .+...|. +++.++ |++++ ...++++|++
T Consensus 91 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~--------~~~~l----~~~~~~~v~~ 148 (357)
T TIGR03539 91 ELVAWLPTLLGLGPGDTVVIPELAYPTYEV--------GALLAGA--TPVAAD--------DPTEL----DPVGPDLIWL 148 (357)
T ss_pred HHHHHHHHHHcCCCCCEEEECCCCcHHHHH--------HHHhcCC--EEeccC--------Chhhc----CccCccEEEE
Confidence 5888887777 7999999999986655421 2234554 334431 22332 2246888888
Q ss_pred cCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--------CCcEEEEcCcCcC--ccCcEE
Q 018300 258 GASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--------YCDVVTTTTHKSL--RGPRGG 322 (358)
Q Consensus 258 ~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--------gaDiv~~S~hK~L--~Gp~GG 322 (358)
..+++| ...+ +++|.++|+++|+++++|++|. .+...+.....++ .--+++.|++|.+ +|.|+|
T Consensus 149 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G 227 (357)
T TIGR03539 149 NSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYL-ELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAG 227 (357)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh-hhccCCCCccceecccCCCccccEEEEeccccccCCCceeEE
Confidence 666665 4454 6678899999999999999975 3333221111111 1137888999984 788999
Q ss_pred EEEEeC
Q 018300 323 MIFFKK 328 (358)
Q Consensus 323 ~I~~~~ 328 (358)
++++++
T Consensus 228 ~~i~~~ 233 (357)
T TIGR03539 228 FVAGDP 233 (357)
T ss_pred EEecCH
Confidence 999776
No 236
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.41 E-value=9e-12 Score=123.32 Aligned_cols=177 Identities=20% Similarity=0.169 Sum_probs=116.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCC----cceEEeCCCHHHHHHHHHHhc--------cCC-----C-EEEecCCCCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAIL--------KPH-----D-RIMGLDLPHG 203 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~----~v~V~~~SGt~A~~~a~~all--------~pG-----D-~Vl~~~~~~g 203 (358)
..+...++|..+.++++++||.+.... +.-+++++||.+|+.++.+.- ..| + .|++++.
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~--- 149 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQ--- 149 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETT---
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccc---
Confidence 345677899999999999999983211 135667788889988875531 112 3 3444442
Q ss_pred cccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc--C---CeEEEE--cCCCCCCCCCHHHHHHHHH
Q 018300 204 GHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--R---PKLIIA--GASAYPRDFDYPRMRQIAD 276 (358)
Q Consensus 204 gh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~---~klIi~--~~s~~~~~~dl~~I~~ia~ 276 (358)
+|++. .+.+...|..++ .+++++ ++.+|+++|++.+.+. + |-+|+. +.+..|..-|+++|.++|+
T Consensus 150 aH~S~-----~Kaa~~lGlg~~--~I~~~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~ 221 (373)
T PF00282_consen 150 AHYSI-----EKAARILGLGVR--KIPTDE-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICE 221 (373)
T ss_dssp S-THH-----HHHHHHTTSEEE--EE-BBT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHH
T ss_pred cccHH-----HHhcceeeeEEE--EecCCc-chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcc
Confidence 45442 245667787644 444664 6799999999987542 2 223333 4455677889999999999
Q ss_pred HcCCEEEEeccccccccccCCcc---CCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 277 AVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 277 e~g~~livD~Ah~~Gl~~~g~~~---~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
++++++++|+|+........... .-++.+|-++.++||++..|-+ |+++++++
T Consensus 222 ~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~ 278 (373)
T PF00282_consen 222 KYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDK 278 (373)
T ss_dssp HCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSG
T ss_pred ccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecc
Confidence 99999999999763222222211 1223799999999999988876 88888876
No 237
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.41 E-value=1.2e-11 Score=114.32 Aligned_cols=201 Identities=16% Similarity=0.205 Sum_probs=131.8
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCC-C------cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-G------NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~-G------~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG 177 (358)
++-|.--..++++.++|+.+ |.+||.-..|-. | .+-+..+-+ .+++++|.|. +.++.|
T Consensus 20 v~PiQrGGiLt~eArkal~E-----~gDGYSvCD~C~~Grldei~kPpI~~F~~----dlaeFlg~D~------~R~t~G 84 (382)
T COG1103 20 VNPIQRGGILTEEARKALLE-----WGDGYSVCDFCLEGRLDEITKPPIKDFLE----DLAEFLGMDE------VRVTAG 84 (382)
T ss_pred cChhhccCcCCHHHHHHHHH-----hcCCcchhhhhccCccccccCCcHHHHHH----HHHHHhCCce------eeeccc
Confidence 34444455679999999864 344554333321 1 122333322 2789999986 566777
Q ss_pred H-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---c---
Q 018300 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--- 250 (358)
Q Consensus 178 t-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---~--- 250 (358)
. .|-++++.++.++||.|++..+ +|++.. -+++..|..+..+|- ..-.+..|+++...+.+++ .
T Consensus 85 ARe~KfavMhal~~~gd~vV~D~~---aHYtty-----vAAEragl~v~eVp~-tg~Pey~i~~e~y~~viee~~~~~g~ 155 (382)
T COG1103 85 AREAKFAVMHALCKEGDWVVVDSL---AHYTTY-----VAAERAGLNVAEVPN-TGYPEYKITPEGYAEVIEEVKDEGGD 155 (382)
T ss_pred chhhHHHHHHHhccCCCEEEEcCc---chHHHH-----HHHHhcCCeEEecCC-CCCCceEecHHHHHHHHHHHHhccCC
Confidence 6 5999999999999999998765 555421 134566765444431 1111235666665555432 1
Q ss_pred CCeEEEEcC--CCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc-CCCC-CCcEEEEcCcCcCcc-CcEEEEE
Q 018300 251 RPKLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK-YCDVVTTTTHKSLRG-PRGGMIF 325 (358)
Q Consensus 251 ~~klIi~~~--s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~-~pl~-gaDiv~~S~hK~L~G-p~GG~I~ 325 (358)
.|.+.++.+ .+||...|.++++++|+++|++++..+|++.|.. | +..+ ++|+++.|.||+++. .+-|++.
T Consensus 156 ~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grm-----pvs~ke~g~DFiVgSGHKsmAAs~PiGvl~ 230 (382)
T COG1103 156 PPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRM-----PVSGKEIGADFIVGSGHKSMAASAPIGVLA 230 (382)
T ss_pred CceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccc-----cccccccCCCEEEecCccchhccCCeeEEe
Confidence 256666554 3689999999999999999999999999988854 3 2233 999999999999843 2346666
Q ss_pred EeCCCCchhHHHHHH
Q 018300 326 FKKDPVLGVELESAI 340 (358)
Q Consensus 326 ~~~~~~~~~~~~~~i 340 (358)
.+. ++++.+
T Consensus 231 ~~e------E~ae~V 239 (382)
T COG1103 231 MSE------EWAEIV 239 (382)
T ss_pred ehh------HHHHHH
Confidence 655 566654
No 238
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.41 E-value=1.4e-11 Score=122.97 Aligned_cols=199 Identities=13% Similarity=0.093 Sum_probs=121.4
Q ss_pred cccccccCC--CCcHHHHHHHhhhhhcc----cCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeC
Q 018300 104 SLELIASEN--FTSRAVMEAVGSCLTNK----YSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPL 175 (358)
Q Consensus 104 ~i~lias~n--~~s~~V~~al~~~l~~~----~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~~ 175 (358)
-++|-..++ .+++.+.+++...+... ...+|+. ..|.+ ++++.+.+++.+..| ++++ +|.++
T Consensus 36 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~LR~aia~~~~~~~g~~~~~~----~I~it 105 (409)
T PRK07590 36 IIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGP---EQGYD---FLREKIAENDYQARGCDISAD----EIFIS 105 (409)
T ss_pred eEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCC---CCCCH---HHHHHHHHHHHHhcCCcCChh----hEEEC
Confidence 345543333 35788888888766532 1123321 12333 455555555555544 4553 57778
Q ss_pred CCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCce---------EEEEeceecCCCC-CCCHHHHH
Q 018300 176 SGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------FESMPYRLDESTG-LVDYDMLE 244 (358)
Q Consensus 176 SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~---------~~~~~~~~~~~~~-~iD~d~le 244 (358)
+|+. |+..+ ..+++|||+|++.+|.|.++.. .+...|.. .++++++++++++ .+|.+
T Consensus 106 ~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~--- 173 (409)
T PRK07590 106 DGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVD--------TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP--- 173 (409)
T ss_pred CCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHH--------HHHHcCCcccccccccccceeEeecccccCCcccCc---
Confidence 8876 66654 5667999999999987766532 12233432 1255566654332 34432
Q ss_pred HHhhhcCCeEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCC-c--EEEEcCc
Q 018300 245 KTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYC-D--VVTTTTH 313 (358)
Q Consensus 245 ~~i~~~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~ga-D--iv~~S~h 313 (358)
..++|+|++..++||+ ..+ +++|.++|+++|++|++|++|. .+...+..+.++ ++. + +++.|++
T Consensus 174 ----~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~-~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 248 (409)
T PRK07590 174 ----EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE-AFISDPSLPHSIYEIEGARECAIEFRSFS 248 (409)
T ss_pred ----ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccch-hhccCCCCCcchhhCCCcccceEEEecCc
Confidence 2478988876666653 444 6678888999999999999976 444333222222 222 2 6688999
Q ss_pred CcC--ccCcEEEEEEeCC
Q 018300 314 KSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 314 K~L--~Gp~GG~I~~~~~ 329 (358)
|++ +|.|-|++++.++
T Consensus 249 K~~~~pGlRiG~~i~~~~ 266 (409)
T PRK07590 249 KTAGFTGTRCAYTVVPKE 266 (409)
T ss_pred cccCCcCceeEEEEcCHH
Confidence 987 6888999999774
No 239
>PLN02672 methionine S-methyltransferase
Probab=99.40 E-value=7.1e-12 Score=136.64 Aligned_cols=210 Identities=10% Similarity=0.029 Sum_probs=134.3
Q ss_pred ccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HH
Q 018300 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (358)
Q Consensus 105 i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~ 181 (358)
+.|-..++ .+|+.|++++...+.. +. + +.|.. ++.+.+++++++.+|.+.+ +.-+|.+++|+. ++
T Consensus 700 I~LsinE~d~ppPp~V~eAi~eal~~-~~--~-----s~g~p---dlr~aLa~~la~~~Gv~~d-~~e~IIvt~Gs~elL 767 (1082)
T PLN02672 700 IHMDVDESFLPVPSAVKASIFESFVR-QN--I-----SESET---DPRPSILQFIKSNYGFPTD-SCTEFVYGDTSLALF 767 (1082)
T ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhh-cC--C-----CCCCh---HHHHHHHHHHHHHhCcCCC-CCCEEEEeCCHHHHH
Confidence 45544444 4689999999876532 11 1 11111 2345567888998998753 112466778876 66
Q ss_pred HHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
..++.++++|||+|++++|.|..+.. .+...|. ++++++++++ +..+|++++++.++..+.++|++..+
T Consensus 768 ~lll~aLl~pGD~VLVp~PtY~~Y~~--------~a~~~Ga--~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nP 837 (1082)
T PLN02672 768 NKLVLCCVQEGGTLCFPAGSNGTYVS--------AAKFLKA--NFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGP 837 (1082)
T ss_pred HHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECc
Confidence 67888999999999999987665532 3345676 4455556543 45899999999885433344544434
Q ss_pred C-CC--CCC---CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCC-------CC---C-c-EEEEcCcCcC--cc
Q 018300 261 A-YP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-------KY---C-D-VVTTTTHKSL--RG 318 (358)
Q Consensus 261 ~-~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl-------~g---a-D-iv~~S~hK~L--~G 318 (358)
+ || ..+ ++++|.++|+++|++||+|++|. ++.+.+... .++ +. . . +++.|++|.+ +|
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYs-dL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpG 916 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFS-GLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGG 916 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCC-ccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHH
Confidence 3 55 344 47788899999999999999975 444432110 001 11 1 1 5677999875 78
Q ss_pred CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 319 PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 319 p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.|.|+++++++ ++.+++..
T Consensus 917 LRIGylIap~~-----eLi~~l~~ 935 (1082)
T PLN02672 917 HEFGFLALNDS-----VLIDAFHS 935 (1082)
T ss_pred HHheeEEeCCH-----HHHHHHHH
Confidence 89999998764 45555543
No 240
>PLN02452 phosphoserine transaminase
Probab=99.40 E-value=3.8e-12 Score=125.58 Aligned_cols=204 Identities=15% Similarity=0.138 Sum_probs=131.1
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCC-CcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHH
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg-~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~ 181 (358)
+.+++.|++..+|+.|++++...+.+....|..- ...+.+.++.+.+++ +++.++++++.+. ++.+.+...|||.++
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~-~~~~L~~l~~~p~-~y~v~~l~Gsgt~~~ 84 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQK-AEADLRELLDIPD-NYEVLFLQGGASTQF 84 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHH-HHHHHHHHhCCCC-CceEEEEeCccHHHH
Confidence 4578899999999999999998876543333211 112335566665555 7899999999854 343555557889999
Q ss_pred HHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc--C
Q 018300 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG--A 259 (358)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~--~ 259 (358)
.+++.+++++||++++.. +|.++..+. +.+...|........+....+..+|+++++. ...++.|.+. .
T Consensus 85 ea~~~nl~~~~~~~l~~~---~G~fg~r~~---~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~hnE 155 (365)
T PLN02452 85 AAIPLNLCKPGDKADFVV---TGSWSKKAA---KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICANE 155 (365)
T ss_pred HHHHHhcCCCCCeEEEEE---CCHHHHHHH---HHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECCCC
Confidence 999999999999998875 466654432 1223334322221111111122567776532 1246666553 4
Q ss_pred CCCCCC-CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 260 SAYPRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 260 s~~~~~-~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+.+|.. .|++++. ++++++|+++++|.. |.+++..++.++|.||+| ||.| |+++.+++
T Consensus 156 TstGv~~~~~~~i~------~~~lvVDa~Ss~g~~-----pidv~~~~v~~~saqK~l-GP~Gl~~v~vr~~ 215 (365)
T PLN02452 156 TIHGVEFKDYPDVG------NVPLVADMSSNFLSK-----PVDVSKYGVIYAGAQKNV-GPSGVTIVIIRKD 215 (365)
T ss_pred CCCcEecCcccccC------CCeEEEECCccccCc-----ccCHHHcCEEEEeccccc-CCCCeEEEEEcHH
Confidence 456764 6776654 389999999987753 233334455557999988 7998 88888874
No 241
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.40 E-value=1.9e-11 Score=117.61 Aligned_cols=198 Identities=19% Similarity=0.105 Sum_probs=128.6
Q ss_pred CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCC--CCcceEEeCCC-HHHHHHHHHH
Q 018300 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN--KWGVNVQPLSG-SPANFEVYTA 187 (358)
Q Consensus 111 ~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~--~~~v~V~~~SG-t~A~~~a~~a 187 (358)
.-.+++.+.+|+...+......||..+ .|.. . +|+.++++++-+.+ --.-.|+.++| ++|+..++.+
T Consensus 76 ~~~ts~~a~~Av~~al~Sgk~N~Yaps---~G~~------~-AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~ 145 (447)
T KOG0259|consen 76 CFRTSQEAEQAVVDALRSGKGNGYAPS---VGIL------P-ARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISS 145 (447)
T ss_pred cccCCHHHHHHHHHHHhcCCCCCcCCc---cccH------H-HHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHH
Confidence 345788888888877766555565431 1222 1 45556666443210 00013555666 5799999999
Q ss_pred hccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHHHHHhhhcCCeEEEEcCCC-CCCC
Q 018300 188 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASA-YPRD 265 (358)
Q Consensus 188 ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~le~~i~~~~~klIi~~~s~-~~~~ 265 (358)
|.+||-.|+++.| |++-+- + .....++ ++.+|++-|+. ..||++.+|.++++.+..+|+++++| +|..
T Consensus 146 LA~p~aNILlPrP---Gfp~Y~--~---~a~~~~l--EVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnV 215 (447)
T KOG0259|consen 146 LANPGANILLPRP---GFPLYD--T---RAIYSGL--EVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNV 215 (447)
T ss_pred hcCCCCceecCCC---CCchHH--H---hhhhcCc--eeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCccc
Confidence 9999999999876 433211 1 2234454 56666666554 48999999999987444455555544 3444
Q ss_pred C---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC----CCcE-EEEcCcCcC--ccCcEEEEEEeCC
Q 018300 266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDV-VTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 266 ~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~----gaDi-v~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
. -+++|+++|+++|+.+|.|+.+. .+++++....|.. -+-+ .+++.+|-+ +|||-|||+..+.
T Consensus 216 ys~~HL~kiae~A~klgi~vIaDEVY~-~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~ 288 (447)
T KOG0259|consen 216 YSEDHLKKIAETAKKLGIMVIADEVYG-HTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDP 288 (447)
T ss_pred ccHHHHHHHHHHHHHhCCeEEehhhcc-eeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecc
Confidence 3 38899999999999999999754 3444443223333 2334 456888875 8999999999876
No 242
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.38 E-value=8.7e-12 Score=121.70 Aligned_cols=157 Identities=20% Similarity=0.233 Sum_probs=102.9
Q ss_pred eEEeCCCHHHH-HHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec-CCCCCCCHHHHHHHh
Q 018300 171 NVQPLSGSPAN-FEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTA 247 (358)
Q Consensus 171 ~V~~~SGt~A~-~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~iD~d~le~~i 247 (358)
+|++++|+.++ ..++..+ .++||+|++++|.|.++.. .+...|.. +++++++ ++++.+|+++|++.+
T Consensus 70 ~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~--------~~~~~g~~--~~~~~~~~~~~~~~d~~~l~~~l 139 (363)
T PF00155_consen 70 NILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIE--------AARLLGAE--VIPVPLDSENDFHLDPEALEEAL 139 (363)
T ss_dssp GEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHH--------HHHHTTSE--EEEEEEEETTTTEETHHHHHHHH
T ss_pred EEEEecccccchhhhhhcccccccccceecCCccccccc--------cccccCce--eeecccccccccccccccccccc
Confidence 57788998754 4445555 6799999999887665432 23455664 4444443 245689999999988
Q ss_pred hhc-----CCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCc---cCCCC-CCc-EEEEcC
Q 018300 248 ILF-----RPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV---ADPFK-YCD-VVTTTT 312 (358)
Q Consensus 248 ~~~-----~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~---~~pl~-gaD-iv~~S~ 312 (358)
++. ++++|++..+++| ...+ +++|+++|+++|+++++|++|.......... ...++ +.+ +++.|+
T Consensus 140 ~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 219 (363)
T PF00155_consen 140 DELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSL 219 (363)
T ss_dssp HTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEES
T ss_pred ccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeec
Confidence 753 4677877666654 4555 4555566999999999999987443321111 01122 334 889999
Q ss_pred cCcC--ccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 313 HKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 313 hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
+|.+ +|.|.|++++++ ++.+.+...
T Consensus 220 SK~~g~~GlRvG~i~~~~------~~~~~l~~~ 246 (363)
T PF00155_consen 220 SKSFGLPGLRVGYIVAPP------ELIERLRRF 246 (363)
T ss_dssp TTTTTSGGGTEEEEEEEH------HHHHHHHHH
T ss_pred cccccccccccccccchh------hhhhhhhhc
Confidence 9986 566779999966 555555543
No 243
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.38 E-value=9.3e-12 Score=127.80 Aligned_cols=147 Identities=18% Similarity=0.170 Sum_probs=104.3
Q ss_pred eEEeCCCH-HHHHHHHHH-----hccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHH
Q 018300 171 NVQPLSGS-PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDML 243 (358)
Q Consensus 171 ~V~~~SGt-~A~~~a~~a-----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~l 243 (358)
+|+.++|+ +|+..++.+ +++|||+|++++|.+..+.. .+.+.+..+++++++.++++ ..+|.+++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~--------~~~l~g~~~~~v~v~~~~~~~f~~d~~~l 234 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLE--------IPELPRYDLEVVHINADEENEWQYPDSEL 234 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHH--------HHHHcCCCeEEEEeecCcccCCCCCHHHH
Confidence 56667665 588888876 68999999999987665432 22344544566777665443 57999999
Q ss_pred HHHhhhcCCeEEEEcCCCCCC--CCC---HHHHHHHHHH--cCCEEEEeccccccccccCCccCCCC---CCcEEEEcCc
Q 018300 244 EKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTH 313 (358)
Q Consensus 244 e~~i~~~~~klIi~~~s~~~~--~~d---l~~I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl~---gaDiv~~S~h 313 (358)
++++. .++|+|++..++||+ ..+ +++|+++|++ ++++||+|+++. .+.. ...+.+. .--+++.|++
T Consensus 235 ~~~~~-~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~--~~~s~~~~~~~~~I~v~SfS 310 (527)
T PRK09275 235 EKLRD-PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG-TFVD--DFRSLFAVLPYNTILVYSFS 310 (527)
T ss_pred HhhcC-CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh-hhcc--cccCHHHhCCCCEEEEeehh
Confidence 99765 478998887777764 455 7788888965 499999999975 3332 1112121 2237889999
Q ss_pred CcC--ccCcEEEEEEeCC
Q 018300 314 KSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 314 K~L--~Gp~GG~I~~~~~ 329 (358)
|++ +|+|-|+++++++
T Consensus 311 K~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 311 KYFGATGWRLGVIALHED 328 (527)
T ss_pred hhccCcHhHHhhhhcCch
Confidence 996 7899999999875
No 244
>PLN02590 probable tyrosine decarboxylase
Probab=99.38 E-value=2.3e-11 Score=125.25 Aligned_cols=178 Identities=20% Similarity=0.145 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCC----cceEEeCCCHHHHHHHHHHh----ccC------CC-EEEecCCCCCccccc
Q 018300 144 EYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAI----LKP------HD-RIMGLDLPHGGHLSH 208 (358)
Q Consensus 144 ~~~~~lE~~~~~~la~lfg~~~~~~----~v~V~~~SGt~A~~~a~~al----l~p------GD-~Vl~~~~~~ggh~s~ 208 (358)
+...++|+.+.+|+++++|.+...+ +--++.++||+||+.++.+. .+. .+ .|++++. +|.+.
T Consensus 166 Pa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~---aH~Sv 242 (539)
T PLN02590 166 PAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ---THSSF 242 (539)
T ss_pred chhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC---chHHH
Confidence 4456799999999999999986311 11355678888998877553 110 12 3333442 44442
Q ss_pred ccccchhccccCCceE-EEEeceecC-CCCCCCHHHHHHHhhhc-----CCeEEEE--cCCCCCCCCCHHHHHHHHHHcC
Q 018300 209 GFMTPKRRVSGTSIYF-ESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIA--GASAYPRDFDYPRMRQIADAVG 279 (358)
Q Consensus 209 ~~~~~~~~~~~~g~~~-~~~~~~~~~-~~~~iD~d~le~~i~~~-----~~klIi~--~~s~~~~~~dl~~I~~ia~e~g 279 (358)
.|++.+.|..- .+..++++. +++.+|+++|++.+++. .|-+|+. +.+.+|..-|+++|.++|+++|
T Consensus 243 -----~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g 317 (539)
T PLN02590 243 -----RKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYG 317 (539)
T ss_pred -----HHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhC
Confidence 13455666531 123344553 25689999999998542 2444444 4455677888999999999999
Q ss_pred CEEEEeccccccccccCCcc---CCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 280 ALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 280 ~~livD~Ah~~Gl~~~g~~~---~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
++++||+|++.......... ..++.+|-++.++||||..|-+ |++++++.
T Consensus 318 ~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~ 371 (539)
T PLN02590 318 IWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDR 371 (539)
T ss_pred CeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCH
Confidence 99999999764333222111 1234789999999999988876 78888764
No 245
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.37 E-value=1.2e-11 Score=126.94 Aligned_cols=170 Identities=18% Similarity=0.154 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCc-ceEEeCCCH-HHHHHHHHH-----hccCCCEEEecCCCCCcccccccccchhccccC
Q 018300 148 ELETLCQKRALAAFNLDENKWG-VNVQPLSGS-PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~-v~V~~~SGt-~A~~~a~~a-----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (358)
..|+.+++++.+.++....... .+|+.++|+ +|+..++.+ +++|||+|++++|.+..+.. .+.+.
T Consensus 133 ~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~--------~~~l~ 204 (521)
T TIGR03801 133 HSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE--------IPELP 204 (521)
T ss_pred HHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH--------HHHHh
Confidence 4555555566665443211110 156666665 588888776 78999999999987665432 12334
Q ss_pred CceEEEEeceecCCC------CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCC---HHHHHHHHHHc--CCEEEEecc
Q 018300 221 SIYFESMPYRLDEST------GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAV--GALLMMDMA 287 (358)
Q Consensus 221 g~~~~~~~~~~~~~~------~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~--g~~livD~A 287 (358)
+..+++++++.++++ ..+|.+++++++. .++|+|++..++||+ ..+ +++|+++|+++ +++||+|.+
T Consensus 205 ~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEv 283 (521)
T TIGR03801 205 RYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDV 283 (521)
T ss_pred cCCcEEEEeecccccccccccCCCCHHHHHHhcC-CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 333455665554322 5689999998764 478988876667664 454 77888899987 999999999
Q ss_pred ccccccccCCccCCCC---CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 288 HISGLVAASVVADPFK---YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 288 h~~Gl~~~g~~~~pl~---gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+. .+.. ...+.+. .--+++.|++|++ +|+|-|+++.+++
T Consensus 284 Y~-~f~~--~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 284 YG-TFVD--DFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred ch-hhcc--cccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCch
Confidence 75 3332 1222222 1237789999996 7899999998865
No 246
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.36 E-value=3.3e-11 Score=117.74 Aligned_cols=196 Identities=15% Similarity=0.134 Sum_probs=122.9
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G-~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
+.+..++++++++...+...-.- .|+.+ .....++.. ..+.++.++|++.. +.+++.+.|++.++.++
T Consensus 35 G~s~~~~e~iea~~~~~~~~v~L-----e~~l~~g~~~~R~~~-~~~~~~~~~~aea~-----~ivnnn~aAVll~~~al 103 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRAPVEL-----ETDLKTGKRGARLTE-LAELLCGLTGAEAA-----AIVNNNAAAVLLTLNAL 103 (395)
T ss_pred CCccCCHHHHHHHHHHhccccee-----eeecccchhhHHHHH-HHHHHhcccchhhe-----eeECCcHHHHHHHHhhh
Confidence 56778999999987765433221 11111 122233333 23334555555552 44567777999888888
Q ss_pred ccCCCEEEecCCCC-CcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeE-EEEcCCCCCC--
Q 018300 189 LKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL-IIAGASAYPR-- 264 (358)
Q Consensus 189 l~pGD~Vl~~~~~~-ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~kl-Ii~~~s~~~~-- 264 (358)
..++..|+.--..- ||++... ..+...|.. .+.++ +++.-...+.+..+.+ ++++ +-+..++|+.
T Consensus 104 ~~~~EvVis~g~lV~gg~~~v~-----d~~~~aG~~--l~EvG---~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~~ 172 (395)
T COG1921 104 AEGKEVVVSRGELVEGGAFRVP-----DIIRLAGAK--LVEVG---TTNRTHLKDYELAINE-NTALLLKVHSSNYGFTG 172 (395)
T ss_pred ccCCeEEEEccccccCCCCChh-----HHHHHcCCE--EEEec---ccCcCCHHHHHHHhcc-CCeeEEEEeeccccccc
Confidence 77555555432111 4555422 234566763 44433 2345677888888876 5554 4455667765
Q ss_pred CCCHHHHHHHHHHcCCEEEEeccccccccccCC--ccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 265 ~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~--~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
..+.++++++||++|+++++|.+ +|...... ...-+. |+|+|++|++|.|.||++|+|+++++
T Consensus 173 ~l~~~~l~~ia~~~~lpvivD~a--Sg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKe 238 (395)
T COG1921 173 MLSEEELVEIAHEKGLPVIVDLA--SGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKE 238 (395)
T ss_pred cccHHHHHHHHHHcCCCEEEecC--CccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHH
Confidence 46678899999999999999996 34321111 111233 99999999999999999999999995
No 247
>PLN02397 aspartate transaminase
Probab=99.36 E-value=1.8e-11 Score=122.99 Aligned_cols=139 Identities=19% Similarity=0.235 Sum_probs=92.8
Q ss_pred CCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee-cCCCCCCCHHHHHHHhhh--cCC
Q 018300 176 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAIL--FRP 252 (358)
Q Consensus 176 SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~iD~d~le~~i~~--~~~ 252 (358)
+|+.++...+..++.|||+|++++|.|.+|.. .+...|. +++++++ ++++..+|++.+++.+.. .++
T Consensus 126 ~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~ 195 (423)
T PLN02397 126 TGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN--------IFRDAGV--PVRTYRYYDPKTRGLDFDGLLEDLKAAPDGS 195 (423)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH--------HHHHcCC--eEEEeecccCcCCccCHHHHHHHHHhCCCCC
Confidence 33444555666667799999999987766532 2345565 4445544 233467999988877653 245
Q ss_pred eEEEEcCCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCC---ccC--CCC-CCc--EEEEcCcCcC--c
Q 018300 253 KLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV---VAD--PFK-YCD--VVTTTTHKSL--R 317 (358)
Q Consensus 253 klIi~~~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~---~~~--pl~-gaD--iv~~S~hK~L--~ 317 (358)
+++++..++||+ .. ++++|+++|+++|+++++|.++. ++.+.+. .+. .+. ..+ +++.|++|++ +
T Consensus 196 ~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~ 274 (423)
T PLN02397 196 FVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQ-GFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLY 274 (423)
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccC-CccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCc
Confidence 677777677654 43 47788899999999999999954 6654331 111 121 112 6688999997 5
Q ss_pred cCcEEEEE
Q 018300 318 GPRGGMIF 325 (358)
Q Consensus 318 Gp~GG~I~ 325 (358)
|+|-|+++
T Consensus 275 G~RvG~~v 282 (423)
T PLN02397 275 GERVGALS 282 (423)
T ss_pred cccceEEE
Confidence 89999985
No 248
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.36 E-value=2.1e-11 Score=118.74 Aligned_cols=192 Identities=14% Similarity=0.098 Sum_probs=124.9
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~p 191 (358)
.+++.+++++.+.+......+||. .|.+ + .|+.+++++|++++ +|.+++|+. ++..++..+ +
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~Y~~----~g~~---~----lr~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~--~ 93 (337)
T PRK03967 31 DLPEELKEEIFEELKRVPFNRYPH----ITSD---P----LREAIAEFYGLDAE----NIAVGNGSDELISYLVKLF--E 93 (337)
T ss_pred CCCHHHHHHHHHHhhcCccccCCC----CCHH---H----HHHHHHHHhCcCcc----eEEEcCCHHHHHHHHHHHh--C
Confidence 457889999877654322233442 1221 2 34557888898874 566777765 777666554 8
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHH
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYP 269 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~ 269 (358)
||+|++.++.|+.+.. .....|. ++++++++. ++.+|++.+++.. .++|++++..++|| ...+.+
T Consensus 94 gd~V~v~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~~--~~~~~v~~~~P~NPtG~~~~~~ 160 (337)
T PRK03967 94 GKHIVITPPTFGMYSF--------YAKLNGI--PVIDVPLKE-DFTIDGERIAEKA--KNASAVFICSPNNPTGNLQPEE 160 (337)
T ss_pred CCeEEEeCCChHHHHH--------HHHHcCC--eEEEeecCC-CCCcCHHHHHHhc--cCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999886653311 1234565 445555553 4579999998864 36787777666654 578899
Q ss_pred HHHHHHHHcCCEEEEeccccccccccCCccCCCC-CC-cEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC-DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 270 ~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-ga-Div~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
+|.++++ +++++++|+++. .+.. ......++ .- -+++.|++|++ +|.|.|++++++ ++.+++...
T Consensus 161 ~l~~i~~-~~~~ii~De~y~-~~~~-~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~------~~i~~~~~~ 229 (337)
T PRK03967 161 EILKVLE-TGKPVVLDEAYA-EFSG-KSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE------EIIDALYRI 229 (337)
T ss_pred HHHHHHh-cCCEEEEECchh-hhcc-cchHHHHhhCCCEEEEecchHhhcchhhhheeeecCH------HHHHHHHhh
Confidence 9999995 699999999976 3321 11111111 11 27789999997 577889999876 555666554
No 249
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.35 E-value=1.5e-11 Score=121.20 Aligned_cols=171 Identities=16% Similarity=0.098 Sum_probs=112.8
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCC-CEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
.++.+++++|++++ +|.+++|+ +++..++.+++++| |+|++.++.++.+.. .....|. ++++++
T Consensus 64 lr~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~--------~~~~~g~--~~~~v~ 129 (364)
T PRK04781 64 LRSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAV--------CARLQNA--PLVEVP 129 (364)
T ss_pred HHHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH--------HHHHcCC--EEEEEe
Confidence 35557888898874 57777775 58999999999999 789988875443211 1234565 444554
Q ss_pred ecC-CC-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHH--cCCEEEEeccccccccccCCccCCCCC
Q 018300 231 LDE-ST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFKY 304 (358)
Q Consensus 231 ~~~-~~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl~g 304 (358)
++. ++ ..+|++++.+.+...++++|++..+++| ...+.+++.++++. .++++++|+++. .+.........++.
T Consensus 130 ~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~-~f~~~~~~~~~~~~ 208 (364)
T PRK04781 130 LVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYG-EFSDVPSAVGLLAR 208 (364)
T ss_pred cCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcch-hhcCCcchHHHHhh
Confidence 532 22 3679998866554457898888666654 57888888877765 378999999965 33321110011121
Q ss_pred Cc--EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhcc
Q 018300 305 CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV 344 (358)
Q Consensus 305 aD--iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~~ 344 (358)
.| +++.|++|++ +|.|-|+++.++ ++.+++....
T Consensus 209 ~~~vi~~~SfSK~~gl~GlRvGy~v~~~------~l~~~l~~~~ 246 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAAARIGSLIANA------ELIAVLRRCQ 246 (364)
T ss_pred CCCEEEEecChhhcccccceeeeeeCCH------HHHHHHHhcc
Confidence 12 7789999986 688999999876 5666665543
No 250
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.35 E-value=3.6e-11 Score=121.75 Aligned_cols=167 Identities=16% Similarity=0.121 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccc-cCC
Q 018300 148 ELETLCQKRALAAFN----LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTS 221 (358)
Q Consensus 148 ~lE~~~~~~la~lfg----~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~-~~g 221 (358)
.+.+.+.+.+.+.+| ++++ +|++++|+ .|+.+++.++++|||.|+++.|.|+++.. .+. ..|
T Consensus 99 ~LR~aiA~~l~~~~~~~~~v~p~----~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~--------~~~~~~g 166 (447)
T PLN02607 99 SFRQAMASFMEQIRGGKARFDPD----RIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTG 166 (447)
T ss_pred HHHHHHHHHHHHhcCCCCCcCHH----HeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC
Confidence 566666677777766 3443 46667765 58888888899999999999988776532 112 235
Q ss_pred ceEEEEeceecCCC-CCCCHHHHHHHhhh-----cCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccc
Q 018300 222 IYFESMPYRLDEST-GLVDYDMLEKTAIL-----FRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 222 ~~~~~~~~~~~~~~-~~iD~d~le~~i~~-----~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~ 290 (358)
. ++++++.++++ ..+|.+++++.++. .++|+|++..++|| +..+ +++|.++|+++|+.+|+|++++
T Consensus 167 ~--~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa- 243 (447)
T PLN02607 167 V--KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYS- 243 (447)
T ss_pred c--EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecccc-
Confidence 4 55666665433 36899999988754 36787777666665 4454 7888899999999999999975
Q ss_pred cccccC-CccCCC------C--C-Cc--EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 291 GLVAAS-VVADPF------K--Y-CD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 291 Gl~~~g-~~~~pl------~--g-aD--iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+.++.+ .+++.+ + . -+ +++.|++|.| +|.|-|++++..+
T Consensus 244 ~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~ 296 (447)
T PLN02607 244 GSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYND 296 (447)
T ss_pred ccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCH
Confidence 333322 122111 0 1 12 5678999986 6788899998544
No 251
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.35 E-value=1.3e-11 Score=123.23 Aligned_cols=141 Identities=16% Similarity=0.231 Sum_probs=94.3
Q ss_pred eCCCHHHHHHHHH---HhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec-CCCCCCCHHHHHHHhhh
Q 018300 174 PLSGSPANFEVYT---AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAIL 249 (358)
Q Consensus 174 ~~SGt~A~~~a~~---all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~iD~d~le~~i~~ 249 (358)
+.+|+.|+..++. ++++|||+|++.+|.|.++.. .+...|. +++++++. +++..+|++.+++.++.
T Consensus 103 t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~--~~~~v~l~~~~~~~~d~~~l~~~~~~ 172 (404)
T PTZ00376 103 ALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN--------IFKSAGL--NVKEYRYYDPKTKGLDFDGMLEDLRT 172 (404)
T ss_pred ccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCC--ceeeccccCcccCCcCHHHHHHHHHh
Confidence 3445567766654 668999999999987766532 2345665 44555553 23468999999998754
Q ss_pred c--CCeEEEEcCCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCC---cc--CCCC-CC-c-EEEEcCcC
Q 018300 250 F--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV---VA--DPFK-YC-D-VVTTTTHK 314 (358)
Q Consensus 250 ~--~~klIi~~~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~---~~--~pl~-ga-D-iv~~S~hK 314 (358)
. +.+++++..++||+ .. ++++|.++|++||+++++|.++. ++...+. .+ ..+. .. . +++.|++|
T Consensus 173 ~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 251 (404)
T PTZ00376 173 APNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQ-GFASGDLDKDAYAIRLFAERGVEFLVAQSFSK 251 (404)
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhc-CccCCCHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 2 34566667677664 43 46788889999999999999854 4443220 00 1111 11 2 77899999
Q ss_pred cC--ccCcEEEEE
Q 018300 315 SL--RGPRGGMIF 325 (358)
Q Consensus 315 ~L--~Gp~GG~I~ 325 (358)
++ +|.|-|+++
T Consensus 252 ~~~~~GlRvG~~~ 264 (404)
T PTZ00376 252 NMGLYGERIGALH 264 (404)
T ss_pred cccccccccceEE
Confidence 97 588999984
No 252
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.35 E-value=2.6e-12 Score=119.82 Aligned_cols=208 Identities=25% Similarity=0.323 Sum_probs=146.5
Q ss_pred hcccccccCCCC----cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH
Q 018300 103 KSLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (358)
Q Consensus 103 ~~i~lias~n~~----s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt 178 (358)
.+|.....+||. +|.+.++-...+ ..|..|..+.|+..|+..+.+. .+..++.+-+.++ .+...|+.
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~al-eeyGaGlssvrfIcGtq~iHk~---LE~kiAqfh~rED-----~ilypscf 137 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKAL-EEYGAGLSSVRFICGTQDIHKL---LESKIAQFHGRED-----TILYPSCF 137 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHH-HHhCCCccceeEEecchHHHHH---HHHHHHHHhCCCc-----eEEecccc
Confidence 445555788886 888998877665 4566788888999998755432 2345788877776 36778999
Q ss_pred HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHh---hhcCCeEE
Q 018300 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA---ILFRPKLI 255 (358)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i---~~~~~klI 255 (358)
.||..++.+++.|.|-|+...+.|.+-+ ++ +.+.. . .+.+|.-.++..+ .+.|-|+|
T Consensus 138 dANag~feail~pedAvfSDeLNhASII-dG-------irLck------r------y~h~dv~~l~~~l~~a~k~r~klv 197 (417)
T KOG1359|consen 138 DANAGAFEAILTPEDAVFSDELNHASII-DG-------IRLCK------R------YRHVDVFDLEHCLISACKMRLKLV 197 (417)
T ss_pred ccchHHHHHhcChhhhhhccccccchhh-hh-------hHHHh------h------hccchhHHHHHHHHHhhhheEEEE
Confidence 9999999999999999998877554321 11 12221 1 1344555555433 23466788
Q ss_pred EEcC--CCCCCCCCHHHHHHHHHHcCCEEEEecccccccccc-CCc-cCCC---CCCcEEEEcCcCcCccCcEEEEEEeC
Q 018300 256 IAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVV-ADPF---KYCDVVTTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 256 i~~~--s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~~-~~pl---~gaDiv~~S~hK~L~Gp~GG~I~~~~ 328 (358)
+.+. |.-|-..|+++|.+++++||++|++|.+|+.|+... |.- ...+ ..+|++..++.|.++|-.||+..+.+
T Consensus 198 ~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~ 277 (417)
T KOG1359|consen 198 VTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK 277 (417)
T ss_pred EecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh
Confidence 7753 344667889999999999999999999999987652 211 1112 26799999999999999999999998
Q ss_pred CCCchhHHHHHHhhccC
Q 018300 329 DPVLGVELESAINNAVF 345 (358)
Q Consensus 329 ~~~~~~~~~~~i~~~~f 345 (358)
+ +.+.|++..-
T Consensus 278 ~------li~llrqr~R 288 (417)
T KOG1359|consen 278 P------LISLLRQRSR 288 (417)
T ss_pred h------HHHHHHhcCC
Confidence 5 5555555433
No 253
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.33 E-value=8.9e-12 Score=130.96 Aligned_cols=161 Identities=15% Similarity=0.049 Sum_probs=113.2
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 152 ~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
.+++.++++||++.. .+.++|| .+|.+++.++++|||+|++.. ++|.|.. ..+.++|.....+.-.
T Consensus 199 eAe~~AA~~fgAd~t-----yfvvNGTS~~n~av~~a~~~~Gd~VLvdR---N~HKSv~-----haLilsga~PVYl~P~ 265 (714)
T PRK15400 199 EAEEYIARVFNADRS-----YMVTNGTSTANKIVGMYSAPAGSTVLIDR---NCHKSLT-----HLMMMSDVTPIYFRPT 265 (714)
T ss_pred HHHHHHHHHhCCCcE-----EEEeCchHHHHHHHHHHhcCCCCEEEeec---ccHHHHH-----HHHHHcCCeEEEeccc
Confidence 467778999999984 4456775 599999999999999999865 5776632 1455677633222211
Q ss_pred ecCCCC---CCC-----HHHHHHHhhhc----CCe-EEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCC
Q 018300 231 LDESTG---LVD-----YDMLEKTAILF----RPK-LIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (358)
Q Consensus 231 ~~~~~~---~iD-----~d~le~~i~~~----~~k-lIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~ 297 (358)
.+ ..| .|+ .+.+++.+.++ +|+ +|+++++.+|...|++.|.++|+.++ +++|+||...+.+.+.
T Consensus 266 rn-~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 266 RN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred cc-ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 22 222 345 89999888653 222 45556666799999999999999887 6899999876655444
Q ss_pred cc--CCCC-CC---c--EEEEcCcCcCccCc-EEEEEEeC
Q 018300 298 VA--DPFK-YC---D--VVTTTTHKSLRGPR-GGMIFFKK 328 (358)
Q Consensus 298 ~~--~pl~-ga---D--iv~~S~hK~L~Gp~-GG~I~~~~ 328 (358)
++ +++. ++ | +++.|+||+|++.. +.+|..+.
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg 382 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKG 382 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcC
Confidence 43 4554 66 5 99999999999874 56666654
No 254
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.32 E-value=1.6e-11 Score=129.10 Aligned_cols=161 Identities=13% Similarity=0.061 Sum_probs=110.9
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 152 ~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
.+++.++++||++.. .+.++|| .+|.+++.++++|||+|++.. ++|.|.. ..+.++|....++.-.
T Consensus 199 eAe~~aA~~fgAd~t-----yfvvNGTS~~n~av~~a~~~~Gd~VLvdR---N~HKSv~-----~aLilsga~PVYl~P~ 265 (713)
T PRK15399 199 EAEEYIARTFGAEQS-----YIVTNGTSTSNKIVGMYAAPAGSTLLIDR---NCHKSLA-----HLLMMSDVVPIWLKPT 265 (713)
T ss_pred HHHHHHHHHhCCCcE-----EEEeCChHHHHHHHHHHhcCCCCEEEeec---ccHHHHH-----HHHHHcCCeeEEeccc
Confidence 367778999999984 4456775 499999999999999999865 5776632 1455677633222211
Q ss_pred ecCCCC---CCCH-----HHHHHHhhhc----CCeEEEE-cCCCCCCCCCHHHHHHHHHHcCCEE-EEeccccccccccC
Q 018300 231 LDESTG---LVDY-----DMLEKTAILF----RPKLIIA-GASAYPRDFDYPRMRQIADAVGALL-MMDMAHISGLVAAS 296 (358)
Q Consensus 231 ~~~~~~---~iD~-----d~le~~i~~~----~~klIi~-~~s~~~~~~dl~~I~~ia~e~g~~l-ivD~Ah~~Gl~~~g 296 (358)
.+ ..| .|+. +.+++.+.++ +|+.+++ +++.+|...|+++|.++| |+.+ ++|+||...+.+.+
T Consensus 266 ~n-~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 266 RN-ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred cc-ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 12 222 3555 8888888643 3455555 555578999999999998 6766 69999986654444
Q ss_pred Ccc--CCCC---CCcEE---EEcCcCcCccC-cEEEEEEeCC
Q 018300 297 VVA--DPFK---YCDVV---TTTTHKSLRGP-RGGMIFFKKD 329 (358)
Q Consensus 297 ~~~--~pl~---gaDiv---~~S~hK~L~Gp-~GG~I~~~~~ 329 (358)
.++ +++. ++|.+ +.|+||+|++. ++.+|..+..
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~ 383 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE 383 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC
Confidence 332 3342 47877 99999999997 4578877653
No 255
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.32 E-value=8.6e-11 Score=115.30 Aligned_cols=201 Identities=12% Similarity=0.082 Sum_probs=127.0
Q ss_pred ccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HH
Q 018300 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (358)
Q Consensus 105 i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~ 181 (358)
++|--.+| .+++.+++++...+.. ..+|+.. + ..++ ++.++++++++++ +|.+++|+. ++
T Consensus 25 i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~----~---~~~L----r~aia~~~~v~~~----~I~it~G~~~~i 87 (360)
T PRK07392 25 LDFSASINPLGPPESVIAAIQSALSA--LRHYPDP----D---YREL----RLALAQHHQLPPE----WILPGNGAAELL 87 (360)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc----C---HHHH----HHHHHHHhCcChh----hEEECCCHHHHH
Confidence 44433334 4678899988765543 2234321 1 1233 4446777788874 466777775 88
Q ss_pred HHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC----CCCHHHHHHHhhhcCCeEEEE
Q 018300 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG----LVDYDMLEKTAILFRPKLIIA 257 (358)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~iD~d~le~~i~~~~~klIi~ 257 (358)
..++.++ .+||+|++.+|.|.++.. .+...|.. +++++++++++ ..|++++++.. .+++++++
T Consensus 88 ~~~~~~l-~~g~~vlv~~P~y~~~~~--------~~~~~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 154 (360)
T PRK07392 88 TWAGREL-AQLRAVYLITPAFGDYRR--------ALRAFGAT--VKELPLPLDQPSPGLTLRLQTLPPQL--TPNDGLLL 154 (360)
T ss_pred HHHHHHh-CCCCeEEEECCCcHHHHH--------HHHHcCCe--EEEEecccccCCcccccCHHHHHHhc--cCCCEEEE
Confidence 8787775 478999999887665432 23455654 44555554333 25677776543 25788877
Q ss_pred cCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCC--cEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 258 GASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYC--DVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 258 ~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~ga--Div~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
..++|| ...+-++|.++++++++ +++|+++. .+...+..++.+ +.. =+++.|++|++ +|.|-|++++++
T Consensus 155 ~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~-~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~ 232 (360)
T PRK07392 155 NNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFM-DFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP 232 (360)
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchh-hhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH
Confidence 666765 57788999999999985 66699965 544333222212 211 27788999986 688999999876
Q ss_pred CCCchhHHHHHHhhc
Q 018300 329 DPVLGVELESAINNA 343 (358)
Q Consensus 329 ~~~~~~~~~~~i~~~ 343 (358)
++.+++...
T Consensus 233 ------~~~~~~~~~ 241 (360)
T PRK07392 233 ------DRLQRWQQW 241 (360)
T ss_pred ------HHHHHHHhh
Confidence 455555543
No 256
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.31 E-value=4.9e-11 Score=116.95 Aligned_cols=202 Identities=15% Similarity=0.149 Sum_probs=126.2
Q ss_pred ccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HH
Q 018300 105 LELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (358)
Q Consensus 105 i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~ 181 (358)
++|-..++. +++.+.+++.+.+.. ..+||.. + ..+ .|+.++++++++++ +|.+++|+. ++
T Consensus 22 ~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~~----~---~~~----lr~~ia~~~~~~~~----~i~it~Ga~~~l 84 (354)
T PRK06358 22 LDFSANINPLGVPESLKQAITENLDK--LVEYPDP----D---YLE----LRKRIASFEQLDLE----NVILGNGATELI 84 (354)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCCc----c---HHH----HHHHHHHHhCCChh----hEEECCCHHHHH
Confidence 455444443 478899998876532 1234321 1 122 45567888898875 567778775 88
Q ss_pred HHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
..++.++ .+ |+|++.+|.++.+.. .+...|.. ++++++++++ ..+| +++.+.+.. ++++|++..+
T Consensus 85 ~~~~~~~-~~-~~v~i~~P~y~~~~~--------~~~~~g~~--~~~~~~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~P 150 (354)
T PRK06358 85 FNIVKVT-KP-KKVLILAPTFAEYER--------ALKAFDAE--IEYAELTEETNFAAN-EIVLEEIKE-EIDLVFLCNP 150 (354)
T ss_pred HHHHHHh-CC-CcEEEecCChHHHHH--------HHHHcCCe--eEEEeCccccCCCcc-HHHHHhhcc-CCCEEEEeCC
Confidence 8877775 44 688888876654421 22345653 4445555333 3688 666555543 6888877666
Q ss_pred CCCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCCc--EEEEcCcCcC--ccCcEEEEEEeC
Q 018300 261 AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCD--VVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 261 ~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~gaD--iv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
+||+ ..+ +++|.++|+++|+++++|+++. .+...+..+..+ +..+ +++.|++|++ +|.|.|+++..+
T Consensus 151 ~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~ 229 (354)
T PRK06358 151 NNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFM-DFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229 (354)
T ss_pred CCCCCCccCHHHHHHHHHHHHhcCCEEEEeCccc-ccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC
Confidence 6654 454 7788889999999999999964 444433222222 2112 7789999996 688899998854
Q ss_pred CCCchhHHHHHHhhc
Q 018300 329 DPVLGVELESAINNA 343 (358)
Q Consensus 329 ~~~~~~~~~~~i~~~ 343 (358)
+ ++.+++...
T Consensus 230 ~-----~~~~~~~~~ 239 (354)
T PRK06358 230 K-----NLAEKLLQM 239 (354)
T ss_pred H-----HHHHHHHHh
Confidence 4 455555543
No 257
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.31 E-value=2.7e-12 Score=124.39 Aligned_cols=188 Identities=17% Similarity=0.225 Sum_probs=39.5
Q ss_pred CCCcHHHHHHHhhhhhccc------CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHH
Q 018300 112 NFTSRAVMEAVGSCLTNKY------SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~------~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~ 185 (358)
.+.++++.+++.....+.. ..|-.|+|| +.+++ .++.++|++.+ +.+++.+.|++.++
T Consensus 16 s~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~-------~~v~~----ll~~ltgAeaA-----~VvNnnaAAv~L~l 79 (367)
T PF03841_consen 16 SPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRY-------AHVEE----LLCELTGAEAA-----LVVNNNAAAVLLAL 79 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc-------ccccc----ccccccccccc-----cccccccccccccc
Confidence 3467778877765433221 122223232 22333 46789999974 34567777888888
Q ss_pred HHhccCCCEEEecC---CCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEE-EEcCCC
Q 018300 186 TAILKPHDRIMGLD---LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASA 261 (358)
Q Consensus 186 ~all~pGD~Vl~~~---~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klI-i~~~s~ 261 (358)
.++. +|.+|++.. .+.||.+... ..+..+|. +.+.++.. ..-.+++.++.+.+ ++.+| .++.||
T Consensus 80 ~~la-~~~EvIvsRGelVeiGgsFRip-----~vm~~sGa--~lvEVGtt---N~t~~~Dye~AI~e-~Ta~ll~Vh~Sn 147 (367)
T PF03841_consen 80 NTLA-KGKEVIVSRGELVEIGGSFRIP-----DVMRQSGA--RLVEVGTT---NRTHLSDYEKAITE-NTAALLKVHTSN 147 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc-cccccccccccccccccccccc-----cccccccc--cccccccc---cccccccccccccc-cccccccccccc
Confidence 7764 577777764 2345543211 12344554 34444432 33445666777765 55544 556677
Q ss_pred CC-----CCCCHHHHHHHHHHcCCEEEEecccccccccc----CC--cc---CCCC-CCcEEEEcCcCcCccCcEEEEEE
Q 018300 262 YP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAA----SV--VA---DPFK-YCDVVTTTTHKSLRGPRGGMIFF 326 (358)
Q Consensus 262 ~~-----~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~----g~--~~---~pl~-gaDiv~~S~hK~L~Gp~GG~I~~ 326 (358)
|- ...++++++++|++||+++++|.+ +|.... +. .| ..+. |+|+++||+.|-|+||+.|+|++
T Consensus 148 ~~i~GFt~~~~~~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~G 225 (367)
T PF03841_consen 148 FRIQGFTGEVSLEELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVG 225 (367)
T ss_dssp -------------HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEE
T ss_pred cccccccccccHHHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEe
Confidence 62 257899999999999999999985 333321 11 12 2234 99999999999999999999999
Q ss_pred eCC
Q 018300 327 KKD 329 (358)
Q Consensus 327 ~~~ 329 (358)
+++
T Consensus 226 kk~ 228 (367)
T PF03841_consen 226 KKE 228 (367)
T ss_dssp EHH
T ss_pred CHH
Confidence 995
No 258
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.31 E-value=1.3e-11 Score=125.53 Aligned_cols=161 Identities=20% Similarity=0.251 Sum_probs=117.0
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEec--
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-- 229 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~-- 229 (358)
+++.+++.||+++. .+..+|| .||..++.++++|||.|++... .|.|... .+.++|. .++++
T Consensus 75 Aqe~aA~~fgAd~t-----yFvvNGTS~ank~vi~a~~~~GD~VLvdRN---~HKSi~~-----glilaGa--~Pvyl~p 139 (557)
T COG1982 75 AQELAARVFGADHT-----YFVVNGTSTANKAVINAVLTPGDKVLVDRN---CHKSIHH-----GLILAGA--TPVYLEP 139 (557)
T ss_pred HHHHHHHHhCCCce-----EEEECCccHHHHHHHHhhcCCCCEEEecCC---ccHHHHH-----HHHHcCC--ceEEecC
Confidence 56678999999985 3344565 5999999999999999999764 5555321 3446665 33332
Q ss_pred eecCCC---CCCCHHHHHHHhhhcC-C-eEEE-EcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccC-CC
Q 018300 230 RLDEST---GLVDYDMLEKTAILFR-P-KLII-AGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD-PF 302 (358)
Q Consensus 230 ~~~~~~---~~iD~d~le~~i~~~~-~-klIi-~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~-pl 302 (358)
..|+.. +.|+.+.+++.+.+++ . |+++ .+++.+|...|.++|++.++++++++.+|.+|.+.....+..+. ..
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~ 219 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL 219 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence 223322 3689999988776543 3 5554 46666799999999999999999999999999876655554443 23
Q ss_pred C-CCcEEEEcCcCcCccC-cEEEEEEeC
Q 018300 303 K-YCDVVTTTTHKSLRGP-RGGMIFFKK 328 (358)
Q Consensus 303 ~-gaDiv~~S~hK~L~Gp-~GG~I~~~~ 328 (358)
+ ++|+++.|+||.+++. ++.+|..++
T Consensus 220 ~~~~~~~tqS~HK~l~alSQaS~iHv~~ 247 (557)
T COG1982 220 NGGADFVTQSTHKLLAALSQASMIHVKD 247 (557)
T ss_pred hcCceEEEechhhhhhhhhhhHHHhhCC
Confidence 2 8999999999999876 456777765
No 259
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.28 E-value=1.8e-11 Score=119.91 Aligned_cols=164 Identities=20% Similarity=0.190 Sum_probs=111.4
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCC-CEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 154 ~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
++.+++++|++++ +|.+++|+ +++..++.++++|| |+|+++++.+..+.. .+...|.. +.++++
T Consensus 66 r~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~--------~~~~~g~~--v~~v~~ 131 (354)
T PRK04635 66 INAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAI--------SAETFNVG--VKALPL 131 (354)
T ss_pred HHHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH--------HHHHcCCE--EEEEec
Confidence 3456778899885 57777777 49999999999999 899998876554321 22345654 444555
Q ss_pred cCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHc-CCEEEEeccccccccccCCccCCCC-CC-c
Q 018300 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YC-D 306 (358)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~-g~~livD~Ah~~Gl~~~g~~~~pl~-ga-D 306 (358)
++ ++.+|.+.+++ + .++|+|++..+++| ...+.+++.++++.. +++|++|++|. .+........... .- =
T Consensus 132 ~~-~~~~~~~~l~~-~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~-~~~~~~s~~~~~~~~~~~ 206 (354)
T PRK04635 132 TA-DYQLPLDYIEQ-L--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI-EFCPEYSVADLLASYPNL 206 (354)
T ss_pred CC-CCCCCHHHHHh-c--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH-hhccCcchHHHHhhCCCE
Confidence 53 46789988874 3 37899888777764 588999999988874 79999999975 3321110000011 11 1
Q ss_pred EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 307 iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+++.|++|++ +|.|-|+++.++ ++.+++..
T Consensus 207 iv~~S~SK~~~l~GlRlG~~i~~~------~~~~~l~~ 238 (354)
T PRK04635 207 VVLRTLSKAFALAGARCGFTLANE------ELIEILMR 238 (354)
T ss_pred EEEechHHHhhhhHHHHhhhhCCH------HHHHHHHh
Confidence 6788999996 577779999876 45555554
No 260
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.26 E-value=2.4e-11 Score=119.02 Aligned_cols=167 Identities=15% Similarity=0.128 Sum_probs=112.0
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCC-CEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
.++++++.+|++++ +|.+++|+ +++..++.++++|| |+|+++++.|..+.. .+...|..+ +.++
T Consensus 62 l~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~--------~~~~~G~~~--~~v~ 127 (351)
T PRK01688 62 VIENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGVEI--RTVP 127 (351)
T ss_pred HHHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHH--------HHHHcCCEE--EEee
Confidence 45568889999875 57777776 49999999999997 899998876654321 234556644 4445
Q ss_pred ecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHc--CCEEEEeccccccccccCCccCCCC-CC
Q 018300 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-YC 305 (358)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~-ga 305 (358)
+++ +..+|++++++.+ .++|+|++..+++| +..+.+++.++++.. +.+|++|+++. .+.........+. +.
T Consensus 128 ~~~-~~~~d~~~l~~~~--~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~-~f~~~~s~~~~~~~~~ 203 (351)
T PRK01688 128 TLD-NWQLDLPAIADNL--DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYI-EFCPQASLAGWLAEYP 203 (351)
T ss_pred cCC-CCCCCHHHHHHhc--cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hcCCCCChHHHHhhCC
Confidence 553 4689999999876 37898888777764 577777766666542 68999999974 3321110000111 22
Q ss_pred c-EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 306 D-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 306 D-iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
. +++.|++|++ +|.|.|++++++ ++.+++...
T Consensus 204 n~iv~rSfSK~~glaGlRiGy~i~~~------~~i~~l~~~ 238 (351)
T PRK01688 204 HLVILRTLSKAFALAGLRCGFTLANE------EVINLLLKV 238 (351)
T ss_pred CEEEEecchHhhcCHHHHHhHHhCCH------HHHHHHHhc
Confidence 2 7788999986 466779999876 455555543
No 261
>PRK07505 hypothetical protein; Provisional
Probab=99.25 E-value=4.7e-10 Score=111.86 Aligned_cols=196 Identities=16% Similarity=0.147 Sum_probs=113.6
Q ss_pred cHHHHHHHhhhhhcccC-CCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh----c
Q 018300 115 SRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L 189 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~-~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al----l 189 (358)
+|.|++|+...+.. +. .+..+.+.....+ ..+ .++++++++++. . .++++||+.|+..++..+ .
T Consensus 62 ~p~v~~A~~~~l~~-~g~~~~~~~~~~~~~~---~~~-~l~~~la~~~~~-~-----~~~~~sG~~a~~~ai~~~~~~~~ 130 (402)
T PRK07505 62 HPAIIEGAVDALKR-TGSLHLSSSRTRVRSQ---ILK-DLEEALSELFGA-S-----VLTFTSCSAAHLGILPLLASGHL 130 (402)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCccchhhhhH---HHH-HHHHHHHHHhCC-C-----EEEECChHHHHHHHHHHHHhccc
Confidence 89999999887753 31 1111111111222 233 356678899987 3 366789999998887543 2
Q ss_pred cCCC-EEEecC-CCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCC
Q 018300 190 KPHD-RIMGLD-LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRD 265 (358)
Q Consensus 190 ~pGD-~Vl~~~-~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~ 265 (358)
.+|+ .|++.+ ..|++. . ........+. ++..++ ..|++++++.+.. +++++++..+++ |..
T Consensus 131 ~~~~~~vi~~~~~~H~s~---~---~~~~~~~~~~--~v~~~~------~~d~~~l~~~~~~-~~~~~vl~~p~~~~G~~ 195 (402)
T PRK07505 131 TGGVPPHMVFDKNAHASL---N---ILKGICADET--EVETID------HNDLDALEDICKT-NKTVAYVADGVYSMGGI 195 (402)
T ss_pred CCCCCCEEEEchhhhHhH---H---hhhhhhhcCC--eEEEeC------CCCHHHHHHHHhc-CCCEEEEEecccccCCc
Confidence 2343 244443 333321 1 0001111122 333332 2488999988754 456665544443 568
Q ss_pred CCHHHHHHHHHHcCCEEEEeccccccccc-cCC-cc---CCC--CCCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHH
Q 018300 266 FDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VA---DPF--KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELES 338 (358)
Q Consensus 266 ~dl~~I~~ia~e~g~~livD~Ah~~Gl~~-~g~-~~---~pl--~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~ 338 (358)
.++++|.++|+++|++|++|++|+.+... .+. .. ... ....+++.|+.|.++++ ||+++..++ ++.+
T Consensus 196 ~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~~~~~~~-----~~~~ 269 (402)
T PRK07505 196 APVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGVIMLGDA-----EQIE 269 (402)
T ss_pred CCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeEEEeCCH-----HHHH
Confidence 89999999999999999999999754321 111 10 111 12347778999998765 788776444 5666
Q ss_pred HHhh
Q 018300 339 AINN 342 (358)
Q Consensus 339 ~i~~ 342 (358)
.+..
T Consensus 270 ~~~~ 273 (402)
T PRK07505 270 LILR 273 (402)
T ss_pred HHHH
Confidence 6654
No 262
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.24 E-value=2.6e-10 Score=113.52 Aligned_cols=193 Identities=17% Similarity=0.158 Sum_probs=126.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc-C
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-P 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~-p 191 (358)
.+|+..++||.. |. ..|+|.+.+.+||+. ++++||.++. +.+.+|..++..++..+++ |
T Consensus 54 apS~~m~aAM~~--------GD---D~Y~gdpSv~~Lee~----vael~G~E~a-----lpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 54 AVTQSMQAAMMR--------GD---EAYSGSRSYYALAES----VKNIFGYQYT-----IPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred CCCHHHHHHHHc--------CC---cccccCchHHHHHHH----HHHHhCCceE-----EECCCCchHHHHHHHhhcccc
Confidence 478888888863 21 235666666677765 6789999872 6667999999999999988 8
Q ss_pred CCEEEecCC----CCCcccccccccchhccccCCceEEEEece------e-cCCCCCCCHHHHHHHhhhcC---CeEEEE
Q 018300 192 HDRIMGLDL----PHGGHLSHGFMTPKRRVSGTSIYFESMPYR------L-DESTGLVDYDMLEKTAILFR---PKLIIA 257 (358)
Q Consensus 192 GD~Vl~~~~----~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~------~-~~~~~~iD~d~le~~i~~~~---~klIi~ 257 (358)
||++.+-.. .|.-|+..+ ...+.+.|.....++.+ + .+..|.+|+++|++.++... .-.+.+
T Consensus 114 g~e~g~~~~~~~v~hn~~fett----~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~ 189 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFDTT----QGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVA 189 (467)
T ss_pred cccccccccccccceEEEEecc----hHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeee
Confidence 998885432 233333211 11234556533322111 1 12347899999999987532 222222
Q ss_pred ---cCCCCCCCCC---HHHHHHHHHHcCCEEEEecccccc-cc--------ccCCccCC-----CCCCcEEEEcCcCcCc
Q 018300 258 ---GASAYPRDFD---YPRMRQIADAVGALLMMDMAHISG-LV--------AASVVADP-----FKYCDVVTTTTHKSLR 317 (358)
Q Consensus 258 ---~~s~~~~~~d---l~~I~~ia~e~g~~livD~Ah~~G-l~--------~~g~~~~p-----l~gaDiv~~S~hK~L~ 317 (358)
..+..|++++ ++++.++|++||+.++.|+|-.+- .. +.+.-+.. ++++|.+++|+.|-+.
T Consensus 190 tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglg 269 (467)
T TIGR02617 190 TITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAM 269 (467)
T ss_pred eEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCC
Confidence 2223455554 677888999999999999986542 21 22221111 2489999999999999
Q ss_pred cCcEEEEEEeCC
Q 018300 318 GPRGGMIFFKKD 329 (358)
Q Consensus 318 Gp~GG~I~~~~~ 329 (358)
.|-||+|+++++
T Consensus 270 ApvGg~Lag~d~ 281 (467)
T TIGR02617 270 VPMGGLLCFKDD 281 (467)
T ss_pred CcccceEEecch
Confidence 999999999986
No 263
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.24 E-value=6.4e-10 Score=110.89 Aligned_cols=198 Identities=13% Similarity=0.123 Sum_probs=117.6
Q ss_pred ccccccCC--CCcHHHHHHHhhhhhcccC----CCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH
Q 018300 105 LELIASEN--FTSRAVMEAVGSCLTNKYS----EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (358)
Q Consensus 105 i~lias~n--~~s~~V~~al~~~l~~~~~----~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt 178 (358)
++|-..++ .+++.|.+++...+.+... .+|.. ..|.+ .+++.+.+++.+ .+++++ +|.+++|+
T Consensus 36 i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p---~~g~~---~lr~aia~~~~~-~~~~~d----~I~it~Ga 104 (402)
T TIGR03542 36 IRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGP---EQGYP---FLREAIAENDYR-GRIDPE----EIFISDGA 104 (402)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCC---CCCCH---HHHHHHHHHHHh-cCCCHH----HEEECCCc
Confidence 44443333 3688899998877654211 12311 12333 344443332211 156654 56777776
Q ss_pred H-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCc---------eEEEEeceecCCC-CCCCHHHHHHHh
Q 018300 179 P-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI---------YFESMPYRLDEST-GLVDYDMLEKTA 247 (358)
Q Consensus 179 ~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~---------~~~~~~~~~~~~~-~~iD~d~le~~i 247 (358)
. |+.. +..++.+||+|++.+|.|.++.. .....|. +.++.+++.++++ ..+|+++
T Consensus 105 ~~al~~-l~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----- 170 (402)
T TIGR03542 105 KCDVFR-LQSLFGSDNTVAVQDPVYPAYVD--------SNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE----- 170 (402)
T ss_pred HHHHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCccccccccccceEEEeecchhhCCCCCccc-----
Confidence 5 6665 45677899999999987765532 1223343 0134444454322 2344321
Q ss_pred hhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCC---cEEEEcCcCcC
Q 018300 248 ILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYC---DVVTTTTHKSL 316 (358)
Q Consensus 248 ~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~ga---Div~~S~hK~L 316 (358)
..++|+|++..+++| ...+ +++|.++|+++|++|++|+++. .+...+..+.++ +.. -+++.|++|.+
T Consensus 171 -~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 248 (402)
T TIGR03542 171 -EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYS-AFISDPSLPHSIFEIPGAKECAIEFRSFSKTA 248 (402)
T ss_pred -cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhh-hhccCCCCCcchhhCCCCcccEEEEecCcccc
Confidence 136788887666665 4555 7889999999999999999976 444333222222 221 26688999987
Q ss_pred --ccCcEEEEEEeCC
Q 018300 317 --RGPRGGMIFFKKD 329 (358)
Q Consensus 317 --~Gp~GG~I~~~~~ 329 (358)
+|.|-|+++++++
T Consensus 249 g~pGlRiG~~i~~~~ 263 (402)
T TIGR03542 249 GFTGVRLGWTVVPKE 263 (402)
T ss_pred CCCCcceEEEEecHH
Confidence 6778899999764
No 264
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.23 E-value=9.3e-11 Score=113.84 Aligned_cols=158 Identities=20% Similarity=0.222 Sum_probs=102.6
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
.|+++++++|.+++ +|.+++|+. ++..+ ..++.+| +|++.++.|.++.. .....|. ++.+++
T Consensus 52 lr~~la~~~~~~~~----~i~~t~G~~~~i~~~-~~~l~~g-~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~- 114 (330)
T TIGR01140 52 LRAAAAAYYGLPAA----SVLPVNGAQEAIYLL-PRLLAPG-RVLVLAPTYSEYAR--------AWRAAGH--EVVELP- 114 (330)
T ss_pred HHHHHHHHhCCChh----hEEECCCHHHHHHHH-HHHhCCC-eEEEeCCCcHHHHH--------HHHHcCC--EEEEeC-
Confidence 45668888998754 567788876 55554 4457888 68887776654422 2234454 444432
Q ss_pred cCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--C
Q 018300 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y 304 (358)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--g 304 (358)
|++++++.+. ++++|++..+++| ...+ +++|+++|+++|+++++|++|. ++..........+ .
T Consensus 115 -------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~ 184 (330)
T TIGR01140 115 -------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFI-DFTPDASLAPQAARFP 184 (330)
T ss_pred -------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc-ccCCccchhhHhccCC
Confidence 7899988873 5677766555554 5667 6677888899999999999986 3332111101011 3
Q ss_pred CcEEEEcCcCcCc--cCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 305 CDVVTTTTHKSLR--GPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 305 aDiv~~S~hK~L~--Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
.++++.|++|+++ |.|.|+++.++ ++.+++...
T Consensus 185 ~~i~~~S~SK~~g~~G~R~G~i~~~~------~~~~~l~~~ 219 (330)
T TIGR01140 185 GLVVLRSLTKFFGLAGLRLGFVVAHP------ALLARLREA 219 (330)
T ss_pred CEEEEEecchhhcCchhhhhheeCCH------HHHHHHHhc
Confidence 4589999999974 44569999877 455655543
No 265
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.23 E-value=1.7e-10 Score=113.44 Aligned_cols=205 Identities=13% Similarity=0.059 Sum_probs=130.4
Q ss_pred hhcccccccCCCCcHHHHHHHhhhhhcccCCCCC-CCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 102 ~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~p-g~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
++.+++.|++..+|+.|++++...+.+....|.. -...+.+.++.+.+++ +++.++++|+.+.+ +.+.+...|||.+
T Consensus 3 ~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~-~~~~Lr~Ll~~P~~-y~Vlfl~GggT~~ 80 (364)
T PRK12462 3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQ-AEADLRDLLGIPDE-YGVVFLQGGSSLQ 80 (364)
T ss_pred cccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHH-HHHHHHHHhCCCCC-CeEEEEeccHHHH
Confidence 4577899999999999999999888775543321 1123445666666665 78899999999542 3355555678889
Q ss_pred HHHHHHHhccCCCEEE-ecCCCCCcccccccccchhccccCCceEEEEecee-cCCCCCCCHHHHHHHhhhcCCeEEEE-
Q 018300 181 NFEVYTAILKPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIA- 257 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl-~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~iD~d~le~~i~~~~~klIi~- 257 (358)
+.++..+++++||+++ +.. +|+++..+.. .+...| .++.+...- ...+..++.++++. . .+.+.|.+
T Consensus 81 ~ea~~~Nll~~g~~~~~~~~---tG~fg~r~~~---ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~~--~-~d~~~v~~t 150 (364)
T PRK12462 81 FSMIPMNFSRPGAAAPEYVT---TGYWSRKAIG---EASRVA-AMRVVWDGAASGYRTLPSLAELDW--D-ARAPFRHYV 150 (364)
T ss_pred HHHHHHHcCCCCCcEEEEEe---CCHHHHHHHH---HHHhcC-CceEecCcCCCCCCcCCCHHHhcc--C-CCCcEEEEc
Confidence 9999999999999765 333 4776654321 222233 233332100 11123566666521 1 14566654
Q ss_pred -cCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 258 -GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 258 -~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+.+.+|...+ ++.+.+++++++|++-.+|. .|.+++..|++.++.+|+|+ |.| ++++.+++
T Consensus 151 ~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s-----~pid~~~~dvi~agsQKnlg-P~Gltvvivs~~ 213 (364)
T PRK12462 151 SNETVEGLQFP-----DAAGLPDSPLIADMSSDFMS-----RPFDVEAYGMVYAHAQKNLG-PAGVTVAIIRRA 213 (364)
T ss_pred cCCCCceEecC-----cccccCCCeEEEEcCchhhC-----CCCChHHccEEEeeccccCC-CCceEEEEECHH
Confidence 3455666654 33334689999999755432 23334456999999999996 888 67777763
No 266
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.22 E-value=7.8e-11 Score=110.24 Aligned_cols=189 Identities=21% Similarity=0.249 Sum_probs=129.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pG 192 (358)
+..+.+++|.+..... .-|+-.+...+||+. .+++||-+.. ++++|||.+|..+++.- -+||
T Consensus 34 PTdeMr~am~eA~vgD--------dVyGeD~tt~rLE~~----vA~l~GKEAg-----LFv~SGTmgNllaIm~Hc~~rg 96 (384)
T KOG1368|consen 34 PTDEMRRAMAEASVGD--------DVYGEDPTTNRLEQR----VAELFGKEAG-----LFVPSGTMGNLLAIMVHCHQRG 96 (384)
T ss_pred ChHHHHHHHhhcccCc--------ccccCCccHHHHHHH----HHHHhCccce-----eeecccccccHHHHHHHhcCCC
Confidence 4667788887543322 234444455567764 7889999874 77899999999998875 5699
Q ss_pred CEEEecCCCCCcccccccccchhc-cccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-------CCeEEEEcCCC--C
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRR-VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-------RPKLIIAGASA--Y 262 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-------~~klIi~~~s~--~ 262 (358)
.+|++-+. +|+ |.| .... ..+.|.. +.++. +++++.+|++++|+.+... .++||.++.+. .
T Consensus 97 ~eii~gd~---~HI-~~~--E~gg~s~l~gv~--~~tv~-~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~ 167 (384)
T KOG1368|consen 97 SEIIVGDR---AHI-HRY--EQGGISQLAGVH--VRTVK-NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNC 167 (384)
T ss_pred ceEEeccc---hhe-eeh--hccChhhhccce--eEeee-eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecccccc
Confidence 99998664 332 222 1112 2345543 33433 3356799999999998643 25889886543 3
Q ss_pred C-CCCCH---HHHHHHHHHcCCEEEEeccccccccc-cCCccCCCC----CCcEEEEcCcCcCccCcEEEEEEeCCCC
Q 018300 263 P-RDFDY---PRMRQIADAVGALLMMDMAHISGLVA-ASVVADPFK----YCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (358)
Q Consensus 263 ~-~~~dl---~~I~~ia~e~g~~livD~Ah~~Gl~~-~g~~~~pl~----gaDiv~~S~hK~L~Gp~GG~I~~~~~~~ 331 (358)
| ...++ +++.++|+++|+.|++|+|....... .| .|+. .+|-+...++|.|+.|-|.+|++++++|
T Consensus 168 Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasg---V~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~FI 242 (384)
T KOG1368|consen 168 GGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASG---VPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKDFI 242 (384)
T ss_pred CceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcC---CCHHHHHHhhhhhhhhhhccCCCCcccEEEccHHHH
Confidence 4 55664 56778999999999999986543221 12 2332 6788888999999999999999999654
No 267
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.22 E-value=1e-10 Score=115.62 Aligned_cols=190 Identities=12% Similarity=0.103 Sum_probs=124.2
Q ss_pred ccccCCCCcHH-HHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHH
Q 018300 107 LIASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (358)
Q Consensus 107 lias~n~~s~~-V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~ 185 (358)
+.+++....|. .++++.+.+. .+.+.+.++.+.+++ +.+.++++|+.+. ++.+.+...|||.++.+++
T Consensus 7 f~~gp~~~~~~~~~~~~~~~~~---------~~~HRs~~F~~i~~e-~~~~L~~l~~~~~-~~~v~~l~GsGT~a~Eaa~ 75 (374)
T TIGR01365 7 FSSGPCAKRPGWSIEELKNAPL---------GRSHRSKLGKEKLAE-AIKKTREMLGVPA-DYLIGIVPASDTGAVEMAL 75 (374)
T ss_pred cCCCccCCCchhhHHHHhhhhc---------ccCcCCHHHHHHHHH-HHHHHHHHhCCCC-CcEEEEECCchHHHHHHHH
Confidence 44566666666 6666654221 122345566666655 7888999999853 2335566778999999999
Q ss_pred HHhc-cCCCEEEecCCCCCcccccccccchhccccCCc-eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEE-EcCCCC
Q 018300 186 TAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-YFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGASAY 262 (358)
Q Consensus 186 ~all-~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi-~~~s~~ 262 (358)
.+++ ++||+|++. |.++..+.. +.+...|. .++.+. .+ .+..+|+++++. . ..+.+ .+.+++
T Consensus 76 ~nl~~~~g~~vLv~-----g~FG~r~~~--eia~~~g~~~v~~l~--~~-~g~~~~~~~ve~--~---~~v~~vhnETST 140 (374)
T TIGR01365 76 WSMLGCRGVDVLAW-----ESFGKGWVT--DVTKQLKLPDVRVLE--AE-YGKLPDLKKVDF--K---NDVVFTWNGTTS 140 (374)
T ss_pred HHcCCCCCCeEEEE-----CHHHHHHHH--HHHHhcCCCCcEEEc--CC-CCCCCCHHHcCC--C---CCEEEecCCCch
Confidence 9998 589999874 344443310 12233555 244443 22 345889999873 1 22333 355677
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|...|++++.... +++++++|+.-++|.. |.+++++|++++|.+|+|.+|.| ++++.+++
T Consensus 141 Gv~npv~~i~~~~--~~~lliVDavSs~g~~-----~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~ 201 (374)
T TIGR01365 141 GVRVPNGDFIPAD--REGLTICDATSAAFAQ-----DLDYHKLDVVTFSWQKVLGGEGAHGMLILSPR 201 (374)
T ss_pred heecccccccccc--CCCcEEEEccchhcCC-----CCChhHCcEEEEechhccCCCCceEEEEECHH
Confidence 8888887665322 4899999998665532 33344899999999999999999 68887774
No 268
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.21 E-value=3.2e-10 Score=112.46 Aligned_cols=190 Identities=16% Similarity=0.114 Sum_probs=112.9
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh----c
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al----l 189 (358)
-+|.|.+++...+......+ . .+ .++...+ ..++++++++.+. .++++||++|+..++.++ .
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~---~-~~-~~~~~~~----la~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~ 113 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVS---N-LY-RIPEQER----LAERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHY 113 (389)
T ss_pred CCHHHHHHHHHHHHhcCccc---c-cc-CChHHHH----HHHHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHH
Confidence 47888888877765322111 1 11 1232222 3455777765443 366789999999998765 5
Q ss_pred cCCC----EEEecCCCCCcccccccccchhccccCCceEEEEec-eecCC---CCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 018300 190 KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDES---TGLVDYDMLEKTAILFRPKLIIAGASA 261 (358)
Q Consensus 190 ~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~-~~~~~---~~~iD~d~le~~i~~~~~klIi~~~s~ 261 (358)
++|| +|++.+..+.|+..- .....+.......+ +..++ -...|++++++.++. ++++|++++.+
T Consensus 114 ~~G~~~r~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~~ 185 (389)
T PRK01278 114 GKGHPERYRIITFEGAFHGRTLA-------TIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPIQ 185 (389)
T ss_pred hcCCCCCCEEEEECCCcCCCcHH-------HHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEeccc
Confidence 6777 899887654443110 11112210000001 11110 012689999998864 78899888654
Q ss_pred CC---C---CCCHHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcC-ccCcEEEEEEeC
Q 018300 262 YP---R---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKK 328 (358)
Q Consensus 262 ~~---~---~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L-~Gp~GG~I~~~~ 328 (358)
.+ . ..++++|.++|++||+++|+|++|. |+...|.. . ..++ ..|++ ++.|.| +|.+.|++++++
T Consensus 186 ~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~ 259 (389)
T PRK01278 186 GEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATE 259 (389)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcH
Confidence 32 1 2258999999999999999999987 65433321 1 1112 34665 567998 456788888876
No 269
>PRK08354 putative aminotransferase; Provisional
Probab=99.20 E-value=4.6e-10 Score=108.14 Aligned_cols=176 Identities=16% Similarity=0.067 Sum_probs=112.1
Q ss_pred ccccccCCC-CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHH
Q 018300 105 LELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANF 182 (358)
Q Consensus 105 i~lias~n~-~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~ 182 (358)
++|-..+|+ .++.+.+++...+.. ..+||. ...+ ++++++++|. +|++++|+. |+.
T Consensus 11 i~l~~~~np~~p~~~~~a~~~~~~~--~~~yp~---------~~~l----~~~ia~~~~~-------~I~vt~G~~~al~ 68 (311)
T PRK08354 11 IDFSASVNPYPPEWLDEMFERAKEI--SGRYTY---------YEWL----EEEFSKLFGE-------PIVITAGITEALY 68 (311)
T ss_pred eEecCCCCCCCCHHHHHHHHHHHHH--hhcCCC---------hHHH----HHHHHHHHCC-------CEEECCCHHHHHH
Confidence 344344443 467788888765432 124542 1123 4457778773 255677764 777
Q ss_pred HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 018300 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (358)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~ 262 (358)
.++ .++.+||+|++.+|.|.++.. .+...|. ++..+ .+|++.+++.++ +++++++..++|
T Consensus 69 ~~~-~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~~-------~~d~~~l~~~~~--~~~~vi~~~P~N 128 (311)
T PRK08354 69 LIG-ILALRDRKVIIPRHTYGEYER--------VARFFAA--RIIKG-------PNDPEKLEELVE--RNSVVFFCNPNN 128 (311)
T ss_pred HHH-HhhCCCCeEEEeCCCcHHHHH--------HHHHcCC--EEeec-------CCCHHHHHHhhc--CCCEEEEecCCC
Confidence 666 445599999999987766532 2344555 33332 357889988765 456666655666
Q ss_pred CC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcC--ccCcEEEEEE
Q 018300 263 PR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 263 ~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L--~Gp~GG~I~~ 326 (358)
|+ ..+ +++|.++|+++|+++++|+++. ++...+. ... .--+++.|++|++ +|.|-|++++
T Consensus 129 PTG~~~~~~~l~~l~~~a~~~~~~li~De~y~-~f~~~~~---~~~~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 129 PDGKFYNFKELKPLLDAVEDRNALLILDEAFI-DFVKKPE---SPEGENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CCCCccCHHHHHHHHHHhhhcCcEEEEeCcch-hcccccc---ccCCCcEEEEeccHhhcCCccceeeeeee
Confidence 54 444 6777788899999999999974 4443321 112 2237789999997 6888899987
No 270
>PRK08637 hypothetical protein; Provisional
Probab=99.20 E-value=1e-09 Score=108.93 Aligned_cols=146 Identities=16% Similarity=0.133 Sum_probs=94.1
Q ss_pred eEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhcc-ccCCceEEEEeceecCCCCCCCHHHHHHHhh
Q 018300 171 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAI 248 (358)
Q Consensus 171 ~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~ 248 (358)
+|++++|+ +|+..++.++++|||+|++.+|.|..+.. .+ ...|. +++++++..+++.+|++++++.++
T Consensus 71 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~~g~--~vv~v~~~~~~~~~d~~~l~~~~~ 140 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL--------TFNTRRGA--EIVTYPIFDEDGGFDTDALKEALQ 140 (388)
T ss_pred eeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHhcCC--EEEEecccCCCCcCCHHHHHHHHH
Confidence 45566665 58989999999999999999987665432 11 13455 455555532345689999998875
Q ss_pred --hcCC-eEEEEcCCCCCC--CCC---HHHHHHHHHH-----cCCEEEEeccccccccccCCccCC-C----C-CCcE--
Q 018300 249 --LFRP-KLIIAGASAYPR--DFD---YPRMRQIADA-----VGALLMMDMAHISGLVAASVVADP-F----K-YCDV-- 307 (358)
Q Consensus 249 --~~~~-klIi~~~s~~~~--~~d---l~~I~~ia~e-----~g~~livD~Ah~~Gl~~~g~~~~p-l----~-gaDi-- 307 (358)
..+. +++++..++||+ ..+ +++|+++|++ ++++|++|.++. ++.+.+....+ + + .-.+
T Consensus 141 ~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~vi~ 219 (388)
T PRK08637 141 AAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYF-GLFYEDSYKESLFAALANLHSNILA 219 (388)
T ss_pred hhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccch-hcccCCccchhhHHHhhcccccceE
Confidence 1233 456666566654 444 6677777765 899999999865 55544321111 1 1 1122
Q ss_pred -EEEcCcCcC--ccCcEEEEEEe
Q 018300 308 -VTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 308 -v~~S~hK~L--~Gp~GG~I~~~ 327 (358)
.+.|++|.+ +|.|.|+++..
T Consensus 220 i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 220 VKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred EEeccccccCCCcccceEEEEEc
Confidence 234899964 78889999864
No 271
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.20 E-value=3.5e-10 Score=112.39 Aligned_cols=200 Identities=18% Similarity=0.099 Sum_probs=119.6
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
.+|.|.+++.+.+... . .++.. ++..+ ....++++++++++.+.+ ..++++||++|+..++..+ ..+
T Consensus 53 ~~p~v~~a~~~~~~~~-~-~~~~~--~~~~~----~~~~l~~~l~~~~~~~~~---~v~~~~sgsea~~~al~~~~~~~~ 121 (413)
T cd00610 53 NHPEVVEALKEQLAKL-T-HFSLG--FFYNE----PAVELAELLLALTPEGLD---KVFFVNSGTEAVEAALKLARAYTG 121 (413)
T ss_pred CCHHHHHHHHHHHHhC-c-CccCc--ccCCH----HHHHHHHHHHHhCCCCCC---EEEEcCcHHHHHHHHHHHHHHHcC
Confidence 5788999988776421 1 11110 01122 334456678899996543 2356779999999999876 468
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCc----------eEEEEeceecC-----CCCCCCHHHHHHHhhhc--CCeE
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDE-----STGLVDYDMLEKTAILF--RPKL 254 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~----------~~~~~~~~~~~-----~~~~iD~d~le~~i~~~--~~kl 254 (358)
+|+|++.+..+.|+... .+...+. ..++..++.++ +....|++++++.++.+ ++++
T Consensus 122 ~~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 194 (413)
T cd00610 122 RKKIISFEGAYHGRTLG-------ALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAA 194 (413)
T ss_pred CCeEEEECCCcCCccHH-------HHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEE
Confidence 99999988655443210 0111110 01122333321 01234889999888652 4667
Q ss_pred EEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCcc-CcEEEE
Q 018300 255 IIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMI 324 (358)
Q Consensus 255 Ii~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~G-p~GG~I 324 (358)
|++++.. .|...+ +++|.++|+++|+++++|++|+ |+...+.. . ...+ ..|++++ .|+|++ .+.|++
T Consensus 195 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~t~--sK~l~~g~~~g~~ 271 (413)
T cd00610 195 VIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIVTL--GKGLGGGLPLGAV 271 (413)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeEEE--cccccCccccEEE
Confidence 7776533 244455 9999999999999999999987 44222211 1 1112 3577654 599864 456888
Q ss_pred EEeCCCCchhHHHHHH
Q 018300 325 FFKKDPVLGVELESAI 340 (358)
Q Consensus 325 ~~~~~~~~~~~~~~~i 340 (358)
++++ ++.+.+
T Consensus 272 ~~~~------~~~~~~ 281 (413)
T cd00610 272 LGRE------EIMDAF 281 (413)
T ss_pred EEcH------HHHHhh
Confidence 8776 566654
No 272
>PRK07908 hypothetical protein; Provisional
Probab=99.20 E-value=1e-09 Score=107.10 Aligned_cols=196 Identities=13% Similarity=0.118 Sum_probs=120.6
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP- 179 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~- 179 (358)
..+++--.+| .+++.+++++...+... .+||.. .|.+ + .|+.+++++|++++ +|.+++|+.
T Consensus 23 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~---~g~~---~----lr~aia~~~~~~~~----~I~it~Ga~~ 86 (349)
T PRK07908 23 GLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPST---EDER---R----ARAAVAARHGRTPD----EVLLLAGAAE 86 (349)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCc---cchH---H----HHHHHHHHhCcChh----hEEECCCHHH
Confidence 4455544454 36888999988765432 234431 1221 2 45567888898874 466677664
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
|+..++. ++||| +++..+.+..+. ..+...|. +++.++++++ +.+|.++++ .++|++++..
T Consensus 87 al~~~~~--l~~~~-viv~~P~y~~~~--------~~~~~~G~--~i~~v~~~~~-~~~d~~~l~-----~~~~~i~l~n 147 (349)
T PRK07908 87 GFALLAR--LRPRR-AAVVHPSFTEPE--------AALRAAGI--PVHRVVLDPP-FRLDPAAVP-----DDADLVVIGN 147 (349)
T ss_pred HHHHHHh--cCCCe-EEEeCCCChHHH--------HHHHHcCC--EEEeeccCcc-cCcChhHhc-----cCCCEEEEcC
Confidence 8877776 57765 445555443321 12345565 4555556533 567887542 2678888765
Q ss_pred CCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCC--CCCCc-EEEEcCcCcC--ccCcEEEEEEeCCCCc
Q 018300 260 SAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKYCD-VVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (358)
Q Consensus 260 s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p--l~gaD-iv~~S~hK~L--~Gp~GG~I~~~~~~~~ 332 (358)
+++ |...+.++|.++|++ +.++++|++|. .+.. +..++. .+..+ +++.|++|++ +|.|.|+++.++
T Consensus 148 p~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~-~~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~---- 220 (349)
T PRK07908 148 PTNPTSVLHPAEQLLALRRP-GRILVVDEAFA-DAVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP---- 220 (349)
T ss_pred CCCCCCCCcCHHHHHHHHhc-CCEEEEECcch-hhcc-CCccccccccCCCEEEEeecccccCCccceeeeeecCH----
Confidence 555 457889999999975 78899999975 2222 221111 12223 5667999976 688899999876
Q ss_pred hhHHHHHHhh
Q 018300 333 GVELESAINN 342 (358)
Q Consensus 333 ~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 221 --~~~~~~~~ 228 (349)
T PRK07908 221 --DVLARLTR 228 (349)
T ss_pred --HHHHHHHh
Confidence 45555554
No 273
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.20 E-value=7.4e-10 Score=108.97 Aligned_cols=206 Identities=23% Similarity=0.255 Sum_probs=137.1
Q ss_pred cccccccCCCC--cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCCCHH-
Q 018300 104 SLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSP- 179 (358)
Q Consensus 104 ~i~lias~n~~--s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg-~~~~~~~v~V~~~SGt~- 179 (358)
-+.|-+-||+. |+.+.+++...+.. . .-||.. . ..++ ++.+++.+| .+.+ +|....|+.
T Consensus 24 ~i~LssNenP~gp~~~~~~~~~~~~~~-~-~rYPd~------~-~~~l----~~a~a~~~~~~~~~----~V~~gnGsde 86 (356)
T COG0079 24 IIKLSSNENPYGPPPKVIEAIRAALDK-L-NRYPDP------D-YREL----RAALAEYYGVVDPE----NVLVGNGSDE 86 (356)
T ss_pred ceeecCCCCCCCCCHHHHHHHHHHHHh-h-ccCCCC------c-HHHH----HHHHHHHhCCCCcc----eEEEcCChHH
Confidence 35565667765 57788888765531 1 124431 1 1233 445788899 6653 577788875
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
.+..++.+++.|||+|+++.+.++-|.. .+...|. +++.++.++ ..+|++.+.+.+.+ ++++|++..
T Consensus 87 ~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~--------~a~~~g~--~~~~v~~~~--~~~d~~~~~~~~~~-~~~lv~i~n 153 (356)
T COG0079 87 LIELLVRAFVEPGDTVLIPEPTFSMYEI--------AAQLAGA--EVVKVPLKE--FRLDLDAILAAIRD-KTKLVFLCN 153 (356)
T ss_pred HHHHHHHHhhcCCCEEEEcCCChHHHHH--------HHHhcCC--eEEEecccc--cccCHHHHHHhhhc-CCCEEEEeC
Confidence 8888889999999999999887655422 2245565 444444553 78999999988876 799998887
Q ss_pred CCCC--CCCCHHHHHHHHHHc--CCEEEEeccccccccccCCccCCCCCCc--EEEEcCcCcC--ccCcEEEEEEeCCCC
Q 018300 260 SAYP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYCD--VVTTTTHKSL--RGPRGGMIFFKKDPV 331 (358)
Q Consensus 260 s~~~--~~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~gaD--iv~~S~hK~L--~Gp~GG~I~~~~~~~ 331 (358)
+|+| +..+.++|.++++.. +.+|++|+|+. .+...... ..+...+ +++=|++|.+ +|-|-|+.+.++
T Consensus 154 PNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~-eF~~~~~~-~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--- 228 (356)
T COG0079 154 PNNPTGTLLPREELRALLEALPEGGLVVIDEAYI-EFSPESSL-ELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--- 228 (356)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hcCCchhh-hhccCCCCEEEEEecHHhhhcchhceeeccCCH---
Confidence 8876 467777777777654 88999999954 33321000 1111233 6677999974 788889988887
Q ss_pred chhHHHHHHhhccCCc
Q 018300 332 LGVELESAINNAVFPG 347 (358)
Q Consensus 332 ~~~~~~~~i~~~~f~g 347 (358)
++.+.++....|.
T Consensus 229 ---~~i~~l~~vr~p~ 241 (356)
T COG0079 229 ---ELIAALNKVRPPF 241 (356)
T ss_pred ---HHHHHHHHhcCCC
Confidence 6777777765544
No 274
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.18 E-value=1.3e-09 Score=108.37 Aligned_cols=185 Identities=15% Similarity=0.078 Sum_probs=113.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
-.|.|.+++.+.+.. +..+.+ .+. .+...++| ++++++++.+. .+.++||++|+..++..+..
T Consensus 58 ~~~~i~~a~~~~~~~-~~~~~~---~~~-~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~ 123 (401)
T PRK00854 58 CHPKILAAMVEQAGR-LTLTSR---AFR-NDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGY 123 (401)
T ss_pred CCHHHHHHHHHHHhh-cccccc---ccC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 378888888776643 222211 111 23333344 45788888653 46788999999999987742
Q ss_pred ------CC-CEEEecCCCCCcccccccccchhccccCCce-----E-----EEEeceecCCCCCCCHHHHHHHhhhcCCe
Q 018300 191 ------PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (358)
Q Consensus 191 ------pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~~iD~d~le~~i~~~~~k 253 (358)
+| ++|++.+..+.|... + .+...+.. + .+..+ ...|++++++.+.+ +++
T Consensus 124 ~~~g~~~~~~~vi~~~~~~HG~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~~~le~~i~~-~~~ 189 (401)
T PRK00854 124 EVKGVPEGQAEIIVCADNFHGRTL-S------IVGFSTDPDARGGFGPFTPGFRVV------PFGDAEALEAAITP-NTV 189 (401)
T ss_pred hccCCCCCCceEEEECCCcCCccH-H------HHhccCCccccccCCCCCCCeEEe------CCCCHHHHHHHhCC-CeE
Confidence 24 677776543322110 0 00000000 0 01111 13588999998864 788
Q ss_pred EEEEcCCCC--CCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc--CcEE
Q 018300 254 LIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG--PRGG 322 (358)
Q Consensus 254 lIi~~~s~~--~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G--p~GG 322 (358)
+|+++++.+ |...+ +++|+++|++||+++++|++|. |+...|... ...+ ..|+++++ |+|.| .+.|
T Consensus 190 aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig 266 (401)
T PRK00854 190 AFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVS 266 (401)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeE
Confidence 999876654 34444 9999999999999999999997 554333211 1122 46888875 99854 3688
Q ss_pred EEEEeCC
Q 018300 323 MIFFKKD 329 (358)
Q Consensus 323 ~I~~~~~ 329 (358)
+++++++
T Consensus 267 ~v~~~~~ 273 (401)
T PRK00854 267 AVLSNSE 273 (401)
T ss_pred EEEEcHH
Confidence 8998873
No 275
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.18 E-value=3e-10 Score=106.49 Aligned_cols=168 Identities=23% Similarity=0.300 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCC-CCCcccc--cccccc-hhccccCCc
Q 018300 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDL-PHGGHLS--HGFMTP-KRRVSGTSI 222 (358)
Q Consensus 147 ~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~-~~ggh~s--~~~~~~-~~~~~~~g~ 222 (358)
|-||+. .++.||++.+. |.+++.|||.|+..++.++++|||+.+...- +|. .+. .+.... ...+...|.
T Consensus 68 dtLe~v----yA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYD-TLeevIG~rg~~~gSL~dfgi 140 (416)
T COG4100 68 DTLERV----YAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYD-TLEEVIGLRGEGQGSLKDFGI 140 (416)
T ss_pred hHHHHH----HHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcch-hHHHHhccCCCCcccHHHhCc
Confidence 456654 68899999863 5678889999999999999999999886531 110 000 000000 011223344
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCC-----CCCHHHHHHHHHHc--CCEEEEeccccccccc
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPR-----DFDYPRMRQIADAV--GALLMMDMAHISGLVA 294 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~~-----~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~ 294 (358)
.++.++ +. .++.+|++.+++.+.+ ++|+|.+.-|- |.. +.++++++++.|+. +++++||+|+. .++-
T Consensus 141 ~Y~~v~--Lt-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG-EFvE 215 (416)
T COG4100 141 KYKAVP--LT-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG-EFVE 215 (416)
T ss_pred ceeecc--cc-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch-hhhh
Confidence 455444 44 2589999999998874 89999885442 432 45678888888887 68999999954 2221
Q ss_pred cCCccCCCC-CCcEEEEcCcCcCccC---cEEEEEEeCC
Q 018300 295 ASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKD 329 (358)
Q Consensus 295 ~g~~~~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~ 329 (358)
...|-. |+|++.+|+-|.-+|. .||+|.++++
T Consensus 216 ---~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~ 251 (416)
T COG4100 216 ---EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAE 251 (416)
T ss_pred ---ccCccccchhhhccceeeCCCCceeeccceeechHH
Confidence 124555 9999999999996553 4688988875
No 276
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.16 E-value=4.2e-10 Score=122.53 Aligned_cols=188 Identities=13% Similarity=0.128 Sum_probs=116.9
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCC--cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-CCHHHHHHHHHHh
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG--NEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI 188 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G--~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~-SGt~A~~~a~~al 188 (358)
.++|+.|++++.+.... |. .|. .|... .-..+.+.+ .+..+++++|++.+ |+.+. ++|.+..+++.++
T Consensus 115 ~~~P~~v~~~i~~~~~~-~T-ayt--PYqaEisQG~lqal~~-~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a~ 185 (993)
T PLN02414 115 THVPPVILRNILENPGW-YT-QYT--PYQAEIAQGRLESLLN-YQTMITDLTGLPMS----NASLLDEGTAAAEAMAMCN 185 (993)
T ss_pred ccCCHHHHHHHHhChHH-Hh-hcC--CCchHHHHHHHHHHHH-HHHHHHHHhCCChh----hEeecCChHHHHHHHHHHH
Confidence 34788887887654321 11 121 12211 011233443 67889999999985 45545 5666777777776
Q ss_pred -ccCC--CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC-CCCCC
Q 018300 189 -LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-SAYPR 264 (358)
Q Consensus 189 -l~pG--D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~-s~~~~ 264 (358)
+++| |+|++++.+|+++..... ......|..++.++ ++. .| ...+ ..-.+++.. +.+|.
T Consensus 186 ~~~~g~~~~VlVs~~~hP~~~~v~~----t~a~~~GieV~~v~--~~~----~~------~~~~-~v~~vlvq~P~~~G~ 248 (993)
T PLN02414 186 NILKGKKKKFLIASNCHPQTIDVCQ----TRADGLGLEVVVAD--EKD----FD------YSSG-DVCGVLVQYPATDGE 248 (993)
T ss_pred hcccCCCCEEEEcCccCHhHHHHHH----HhhhhcCCEEEEec--chh----hc------cccC-ceEEEEEecCCCCeE
Confidence 6655 789999887766543210 11223455444333 321 11 0111 122233444 45788
Q ss_pred CCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcC-----ccCcEEEEEEeCC
Q 018300 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-----RGPRGGMIFFKKD 329 (358)
Q Consensus 265 ~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L-----~Gp~GG~I~~~~~ 329 (358)
..|+++|.++||++|+++++ ++|.+++.. +..|-+ ||||+++++|||+ +||+.|+++++++
T Consensus 249 v~dv~~I~~~ah~~GaL~iV-aad~lal~~---l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~ 315 (993)
T PLN02414 249 VLDYAEFVKNAHANGVKVVM-ATDLLALTM---LKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQE 315 (993)
T ss_pred EcCHHHHHHHHHHcCCEEEE-EECHHHhcC---CCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHH
Confidence 89999999999999999999 888877652 112333 9999999999997 7788899999884
No 277
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.15 E-value=7.5e-10 Score=104.94 Aligned_cols=194 Identities=19% Similarity=0.245 Sum_probs=125.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHh--cc
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAI--LK 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~al--l~ 190 (358)
.++.+...........+.++...+++..-..+.+ +-+..-++++-+.|+...+ |....+|+ -++.++.+. ..
T Consensus 43 ~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~-lp~~lgdklApLiGA~~~E----vvv~dtts~nl~k~L~aalr~~ 117 (407)
T COG3844 43 RPRAVTARLQQVATDEWGEGLIRSWNKAKADWFD-LPERLGDKLAPLIGARAGE----VVVTDTTSINLFKVLAAALRPQ 117 (407)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhhcccCCchhh-chhHHHHHhhhhhcCCCCc----eEEeCCcchHHHHHHHHHhccC
Confidence 4556666555566666665554444433334444 3334577899999998863 44455555 444455444 45
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCH
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDY 268 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl 268 (358)
+|++||+++- +++-..++.+..-....+. .|++ .+.++++++++.+.+ ++.+|.+++.+| |+..|+
T Consensus 118 ~~r~vIv~E~---~~fpTdly~a~g~~~~~~~-----~~~~---~~~~~P~~~~~~~~d-d~AvV~L~~V~y~TGql~dm 185 (407)
T COG3844 118 EGRRVIVSEG---DNFPTDLYIAEGLADLLGI-----GYDL---EGVIAPRALEEAITD-DVAVVLLSHVNYKTGQLLDM 185 (407)
T ss_pred CCceEEeecC---CCCCcchhhhcchhhhhcc-----cccc---eeeeChHHHHHhhcc-ceEEEEeccccccccceeeH
Confidence 6999999863 3222222211111122221 1222 246778899998865 677787776664 678999
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE--EEEEEeCC
Q 018300 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG--GMIFFKKD 329 (358)
Q Consensus 269 ~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G--G~I~~~~~ 329 (358)
.+|.++||++|++++.|-||++|.+ |..+. |+|+.+.++||+|.|..| ++++..+.
T Consensus 186 ~aiT~~AH~~galv~wDLAHsaGav-----p~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~ 245 (407)
T COG3844 186 RAITALAHQHGALVGWDLAHSAGAV-----PVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPR 245 (407)
T ss_pred HHHHHHHHhcCceEEeehhcccCCc-----ceeecccCCCeeeeeeceeccCCCCCceeEEeccc
Confidence 9999999999999999999999865 33444 899999999999955444 67776653
No 278
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.14 E-value=1.6e-09 Score=108.31 Aligned_cols=170 Identities=17% Similarity=0.144 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhcc-----CCCEEEe-cCCCCCcccccccccchhccccC
Q 018300 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILK-----PHDRIMG-LDLPHGGHLSHGFMTPKRRVSGT 220 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~-----pGD~Vl~-~~~~~ggh~s~~~~~~~~~~~~~ 220 (358)
++++.+.+++.+.+|..-. + -+|++++|+. |+..++.++++ |||+|++ .+|.|.++...... .. .+.
T Consensus 78 ~LR~aia~~~~~~~g~~v~-~-~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~---~~-~~~ 151 (416)
T PRK09440 78 ELIEALAALLNERYGWNIS-P-QNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE---ED-LFV 151 (416)
T ss_pred HHHHHHHHHHHHHhCCCCC-h-hhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc---cC-cee
Confidence 5666667777776675321 1 2577788775 88888888874 6999999 68887765431100 00 011
Q ss_pred CceEEEEeceecCC--CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEecccccccc
Q 018300 221 SIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLV 293 (358)
Q Consensus 221 g~~~~~~~~~~~~~--~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~ 293 (358)
+......+ ++.+ ...+|+++++ +. .+++++++..++||+ ..+ +++|.++|+++|++|++|.++.....
T Consensus 152 ~~~~~~~~--~~~~~~~~~~d~~~l~--~~-~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~ 226 (416)
T PRK09440 152 SYRPNIEL--LPEGQFKYHVDFEHLH--ID-EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFP 226 (416)
T ss_pred eccccccc--ccccccccCCCHHHcc--cC-CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCC
Confidence 11112222 2222 2468999987 23 367888777667664 444 67888899999999999999752110
Q ss_pred ccCCccC--CC-CCCcEEEEcCcCc-CccCcEEEEEEeCC
Q 018300 294 AASVVAD--PF-KYCDVVTTTTHKS-LRGPRGGMIFFKKD 329 (358)
Q Consensus 294 ~~g~~~~--pl-~gaDiv~~S~hK~-L~Gp~GG~I~~~~~ 329 (358)
...... +. ..-=+++.|++|+ ++|.|.|+++++++
T Consensus 227 -~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~~~ 265 (416)
T PRK09440 227 -GIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIADEE 265 (416)
T ss_pred -CcchhhcCccccCCeEEEecccccCCCcceEEEEeCCHH
Confidence 000000 00 1112678899997 47888899998764
No 279
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.13 E-value=1.7e-09 Score=106.47 Aligned_cols=198 Identities=18% Similarity=0.143 Sum_probs=117.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---cc
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LK 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al---l~ 190 (358)
.+|.|.+++.+.+.... ..+.+| . .+... ..++++++++|.+. .+.+.||++|+..++..+ ..
T Consensus 44 ~~p~v~~a~~~~~~~~~---~~~~~~-~-~~~~~----~l~~~la~~~g~~~-----~~~~~sg~~a~~~a~~~~~~~~~ 109 (379)
T TIGR00707 44 AHPKLVEALKEQLEKLV---HVSNLY-Y-TEPQE----ELAEKLVEHSGADR-----VFFCNSGAEANEAALKLARKYTG 109 (379)
T ss_pred CCHHHHHHHHHHHhhcc---cccccc-C-CHHHH----HHHHHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHhh
Confidence 35888888877665321 111222 2 23223 34556888999864 356788999999988755 22
Q ss_pred ----CCCEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCCCC---CCCHHHHHHHhhhcCCeEEEEcCCCC
Q 018300 191 ----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTG---LVDYDMLEKTAILFRPKLIIAGASAY 262 (358)
Q Consensus 191 ----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~---~iD~d~le~~i~~~~~klIi~~~s~~ 262 (358)
+||+|+++++.+.++..... ...+.. +.....++.++.. ..|++++++.+.. ++++|++++.++
T Consensus 110 ~~~~~~~~vi~~~~~yh~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~p~~~ 181 (379)
T TIGR00707 110 DKGKEKKKIIAFENSFHGRTMGAL-------SATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD-ETAAVIVEPIQG 181 (379)
T ss_pred ccCCCCCeEEEECCCcCCccHHHH-------HhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh-CeeEEEEEcccc
Confidence 47999998876544322110 011100 0000111111111 1289999998764 688888865443
Q ss_pred C--C-CC---CHHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCc-cCcEEEEEEeCCCCc
Q 018300 263 P--R-DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVL 332 (358)
Q Consensus 263 ~--~-~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~~ 332 (358)
+ . .. ++++|.++|+++|+++++|++|. |+...+.. + .... ..|++ +++|+++ |.+.|+++.++
T Consensus 182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~--t~sK~~~~G~riG~~~~~~---- 254 (379)
T TIGR00707 182 EGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDII--TLAKGLGGGVPIGATLAKE---- 254 (379)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEE--EEcccccCCcccEEEEEcH----
Confidence 2 2 12 37899999999999999999986 55333321 1 1112 34665 4579985 45779998876
Q ss_pred hhHHHHHHhh
Q 018300 333 GVELESAINN 342 (358)
Q Consensus 333 ~~~~~~~i~~ 342 (358)
++.+.+..
T Consensus 255 --~~~~~~~~ 262 (379)
T TIGR00707 255 --EVAEAFTP 262 (379)
T ss_pred --HHHhhhcC
Confidence 56565544
No 280
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.11 E-value=7.3e-10 Score=107.67 Aligned_cols=160 Identities=14% Similarity=0.080 Sum_probs=103.0
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
.++.+++++|.+.. +|.+++|+. ++..++. +++||+ |++++|.+..+.. .+...|.. ++++++
T Consensus 45 lr~~ia~~~~~~~~----~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~--------~~~~~G~~--v~~vp~ 108 (332)
T PRK06425 45 IEDQIKIYTQGLKI----KVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYKG--------YAFTHGIR--ISALPF 108 (332)
T ss_pred HHHHHHHHhCCCcc----eEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHHH--------HHHHcCCe--EEEEeC
Confidence 34558889999874 577788875 7777775 578876 5555765544321 33456764 445455
Q ss_pred cCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C
Q 018300 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K 303 (358)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~ 303 (358)
++ ..+|.+.+++ .++|+|++..++||+ ..+ +++|.++|+++|+++++|+++. .+...+. ++.. +
T Consensus 109 ~~--~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~-~~~~~~~-~~~~~~~~ 180 (332)
T PRK06425 109 NL--INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFI-DFVPNRA-EEDVLLNR 180 (332)
T ss_pred Cc--ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchh-ccccccc-hhHHHHhc
Confidence 43 2345554442 378988887677654 555 6677788899999999999854 4433221 1111 1
Q ss_pred C-C-cEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 304 Y-C-DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 304 g-a-Div~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
. - -+++.|++|++ +|.|-|++++++ ++.+++..
T Consensus 181 ~~~~vi~~~SfSK~~~l~GlRiGy~v~~~------~li~~l~~ 217 (332)
T PRK06425 181 SYGNVIIGRSLTKILGIPSLRIGYIATDD------YNMKISRK 217 (332)
T ss_pred cCCCEEEEeecHHhcCCchhhheeeecCH------HHHHHHHH
Confidence 1 1 26778999985 678889999976 45555554
No 281
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.11 E-value=3.5e-09 Score=105.14 Aligned_cols=199 Identities=15% Similarity=0.088 Sum_probs=115.9
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
.+|.|.+++...+.. +..+ + +.+ ..+... .+++.++++++.+. .++++||+.||..++....
T Consensus 48 ~~p~v~~a~~~~~~~-~~~~--~-~~~-~~~~~~----~~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-LTLT--S-RAF-YNDVLG----LAEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-cccc--c-ccc-cCHHHH----HHHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 578888888876542 2111 1 111 122222 34555777887643 4678899999999998663
Q ss_pred ------cCCCEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCC---CCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 190 ------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 190 ------~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~---~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
..+++|+..+-.+ |+.... .+...+.. ......+..+. -...|++++++.+...++++|++++
T Consensus 114 ~~~~~~~~~~~vl~~~~~~-----Hg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep 186 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNF-----SGRTIG--ACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEP 186 (400)
T ss_pred hccCCCCCCCeEEEECCCc-----CCccHH--HHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcC
Confidence 1357788776432 222110 11111110 00000000000 0124899999988634688888865
Q ss_pred CC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-cCCCC--CCcEEEEcCcCcCccC--cEEEEEEeC
Q 018300 260 SA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRGP--RGGMIFFKK 328 (358)
Q Consensus 260 s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~~pl~--gaDiv~~S~hK~L~Gp--~GG~I~~~~ 328 (358)
.. .|...+ +++|.++|++||+++++|++|. |+...|.. ..... ..|++++| |+|.+. +-|++++++
T Consensus 187 ~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 187 IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLAND 263 (400)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcH
Confidence 43 345555 9999999999999999999985 54322321 11112 35888765 999653 668888877
Q ss_pred CCCchhHHHHHHhh
Q 018300 329 DPVLGVELESAINN 342 (358)
Q Consensus 329 ~~~~~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 264 ------~~~~~~~~ 271 (400)
T PTZ00125 264 ------DVMLVIKP 271 (400)
T ss_pred ------HHHhhccC
Confidence 56565543
No 282
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.09 E-value=2.3e-09 Score=104.51 Aligned_cols=196 Identities=17% Similarity=0.128 Sum_probs=119.9
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC---CCCCCCcceEEeCCC
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLSG 177 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg---~~~~~~~v~V~~~SG 177 (358)
..+.|-..+| .+|+.+++++...+.......||. .| ..++++ .++++++ .+++ +|.+++|
T Consensus 20 ~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~----~~---~~~Lr~----aia~~~~~~~~~~~----~i~it~G 84 (335)
T PRK14808 20 DRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYD----SP---DEELIE----KILSYLDTDFLSKN----NVSVGNG 84 (335)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC----CC---hHHHHH----HHHHHhCCCCCCcc----eEEEcCC
Confidence 3344444444 468889999876553321111322 12 223444 4666666 5553 5777777
Q ss_pred HH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEE
Q 018300 178 SP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (358)
Q Consensus 178 t~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi 256 (358)
+. ++..++.++ |+|++.+|.|.++.. .+...|. +++.+++++ ++.+|.+. + .++++|+
T Consensus 85 a~~~i~~~~~~~----d~v~v~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~~~~~~~~----~--~~~~~i~ 143 (335)
T PRK14808 85 ADEIIYVMMLMF----DRSVFFPPTYSCYRI--------FAKAVGA--KFLEVPLTK-DLRIPEVN----V--GEGDVVF 143 (335)
T ss_pred HHHHHHHHHHHh----CcEEECCCCHHHHHH--------HHHHcCC--eEEEecCCC-cCCCChhH----c--cCCCEEE
Confidence 64 888888876 789998886655422 3345666 445555653 34444322 2 2468888
Q ss_pred EcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CC-cEEEEcCcCcCc--cCcEEEEEEeCCC
Q 018300 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC-DVVTTTTHKSLR--GPRGGMIFFKKDP 330 (358)
Q Consensus 257 ~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-ga-Div~~S~hK~L~--Gp~GG~I~~~~~~ 330 (358)
+..++|| ...+.+++.+++ +++++|++|+++. .+. .......++ .. =+++.|++|+++ |.|-|++++++
T Consensus 144 i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~-~f~-~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~-- 218 (335)
T PRK14808 144 IPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYY-EFH-GESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE-- 218 (335)
T ss_pred EeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchh-hhc-CCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCH--
Confidence 8777765 578889999998 5799999999965 332 111111122 21 267889999974 78889999987
Q ss_pred CchhHHHHHHhhc
Q 018300 331 VLGVELESAINNA 343 (358)
Q Consensus 331 ~~~~~~~~~i~~~ 343 (358)
++.+++...
T Consensus 219 ----~~~~~l~~~ 227 (335)
T PRK14808 219 ----KFIDAYNRV 227 (335)
T ss_pred ----HHHHHHHHh
Confidence 455666543
No 283
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.07 E-value=4.7e-09 Score=104.49 Aligned_cols=196 Identities=14% Similarity=0.110 Sum_probs=112.8
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
-+|.|.+++...+.. +... . +.. .++...+ ..++++++++.+. .++++||++|+..++.....
T Consensus 57 ~~p~v~~ai~~~~~~-~~~~--~-~~~-~~~~~~~----l~~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~ 122 (396)
T PRK04073 57 RHPKIIQALKDQADK-VTLT--S-RAF-HSDQLGP----WYEKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAY 122 (396)
T ss_pred CCHHHHHHHHHHHhh-cccc--c-ccc-CCHHHHH----HHHHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhh
Confidence 478888888776542 2111 1 111 1222222 3455777777543 46678999999999876521
Q ss_pred ------CC-CEEEecCCCCCcccccccccchhccccCCce-----EEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 191 ------PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 191 ------pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
+| ++|+..+..+.|... + .+...+.. +.....++.. -...|++++++.+.. ++++|+++
T Consensus 123 ~~~g~~~~r~~ii~~~~~~HG~~~-~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~l~~~i~~-~~~~viie 193 (396)
T PRK04073 123 DVKGVEPNKAEIIACEGNFHGRTM-A------AVSLSSEEEYKRGFGPMLPGIKK-IPYGDLEALKAAITP-NTAAFLVE 193 (396)
T ss_pred hccCCCCCCCEEEEECCCcCCCCH-H------HHhhcCCcccccCCCCCCCCceE-eCCCCHHHHHHhccc-CeEEEEEc
Confidence 44 678877643322210 0 11112110 0000000000 012378999988753 67888888
Q ss_pred CCCC--CCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCcc--CcEEEEEEe
Q 018300 259 ASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRGGMIFFK 327 (358)
Q Consensus 259 ~s~~--~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~G--p~GG~I~~~ 327 (358)
+..+ |...+ +++|.++|+++|+++++|++|. |+...|.. . ...+ ..|++++ .|.+++ .+.|+++++
T Consensus 194 p~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~~~~ 270 (396)
T PRK04073 194 PIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPISCVAAN 270 (396)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcceEEEEc
Confidence 7643 44443 8999999999999999999988 54333321 1 1122 4687765 599854 467888888
Q ss_pred CCCCchhHHHHHHh
Q 018300 328 KDPVLGVELESAIN 341 (358)
Q Consensus 328 ~~~~~~~~~~~~i~ 341 (358)
+ ++.+.+.
T Consensus 271 ~------~i~~~~~ 278 (396)
T PRK04073 271 R------DILGVFT 278 (396)
T ss_pred H------HHHhhhc
Confidence 7 5666554
No 284
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.07 E-value=3.7e-09 Score=115.41 Aligned_cols=150 Identities=17% Similarity=0.108 Sum_probs=101.3
Q ss_pred HHHHHHHHcCCCCCCCcceEEeC-CCHHHHHHHHHHh-ccCC--CEEEecCCCCCcccccccccchhccccCCceEEEEe
Q 018300 153 CQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~-SGt~A~~~a~~al-l~pG--D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~ 228 (358)
.+..++++.|++.+ |+.+. ++|.+..+++.++ +++| |+|++++..|.++..... ......|. +++.
T Consensus 126 ~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~----t~a~~~G~--ev~~ 195 (954)
T PRK05367 126 FQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLR----TRAEPLGI--EVVV 195 (954)
T ss_pred HHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHH----HHHHhCCC--EEEE
Confidence 67789999999974 44444 6666777777776 6664 999999877765432110 11234455 4444
Q ss_pred ceecCCCCCCCHHHHHHHhhhcCCeEEEEcC-CCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCc
Q 018300 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGA-SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (358)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~~~klIi~~~-s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaD 306 (358)
++.+. |++ ..+...+++.. +.+|...|+++|+++||++|+++++|+.|.+... ...|-+ |||
T Consensus 196 ~~~~~-----d~~-------~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~----l~~pge~GaD 259 (954)
T PRK05367 196 GDAAK-----ALD-------HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTL----LTPPGEMGAD 259 (954)
T ss_pred ecCcc-----CCC-------cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccC----CCChhhcCCC
Confidence 33331 111 11333444544 4578888999999999999999999997743322 123444 999
Q ss_pred EEEEcCcCc-----CccCcEEEEEEeC
Q 018300 307 VVTTTTHKS-----LRGPRGGMIFFKK 328 (358)
Q Consensus 307 iv~~S~hK~-----L~Gp~GG~I~~~~ 328 (358)
++++++||| ++||..|++.+++
T Consensus 260 i~vgs~qkfg~P~g~GGP~aGflavr~ 286 (954)
T PRK05367 260 IAVGSAQRFGVPMGFGGPHAAYFAVRD 286 (954)
T ss_pred EEEeeCcccCCCCCCCCCCEEEEEECH
Confidence 999999999 7888779999987
No 285
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.04 E-value=4.3e-09 Score=102.28 Aligned_cols=153 Identities=18% Similarity=0.162 Sum_probs=96.9
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 154 QKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 154 ~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
++.+++.+|.+ +|.+++|+. |+..++ .+.|||+|++.+|.|..+.. .+...|. +++++++
T Consensus 55 r~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~v~~- 115 (330)
T PRK05664 55 EAAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAH--------AWRRAGH--QVRELDE- 115 (330)
T ss_pred HHHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHH--------HHHHcCC--eEEEech-
Confidence 44577788864 366788875 776654 46899999999986655422 2345565 4444333
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCc-
Q 018300 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCD- 306 (358)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaD- 306 (358)
+++++.+. ++|++++..++|| ...+ +++|.++|+++|++|++|+++. ........ ..+..-|
T Consensus 116 --------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~-~~~~~~s~-~~~~~~~~ 183 (330)
T PRK05664 116 --------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSL-AACAHRPG 183 (330)
T ss_pred --------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcc-cCCCcccc-cccccCCC
Confidence 34555543 5677666555665 4555 5666677889999999999864 22211100 1122212
Q ss_pred -EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 307 -VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 307 -iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
+++.|++|++ +|.|-|++++++ ++.+++...
T Consensus 184 vi~~~SfSK~~gl~GlRiG~~v~~~------~l~~~~~~~ 217 (330)
T PRK05664 184 LIVLRSFGKFFGLAGARLGFVLAEP------ALLRALAEL 217 (330)
T ss_pred EEEEeeccccccCCCcceEEEEeCH------HHHHHHHHh
Confidence 7789999997 678889999976 455555543
No 286
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.03 E-value=1.3e-08 Score=101.10 Aligned_cols=199 Identities=19% Similarity=0.092 Sum_probs=112.8
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC-C
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH-D 193 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG-D 193 (358)
+|.+.+++...+.... ....+| . .+... ...++++++++.+..+ ..+++.||++|+..++.....+| +
T Consensus 61 ~p~v~~ai~~~~~~~~---~~~~~~-~-~~~~~----~la~~l~~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~g~~ 129 (398)
T PRK03244 61 HPAVVEAVTRQLATLG---HVSNLF-A-TEPQI----ALAERLVELLGAPEGG--RVFFCNSGAEANEAAFKLARLTGRT 129 (398)
T ss_pred CHHHHHHHHHHHHhcc---CccCcc-C-CHHHH----HHHHHHHHhCCCCCCC--EEEEeCchHHHHHHHHHHHHHHCCC
Confidence 6888888877665421 111122 2 22112 2445678888854211 23556789999999998776676 4
Q ss_pred EEEecCCCCCcccccccccchhccccCCceEEEEec-eecCCC---CCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC
Q 018300 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILFRPKLIIAGASAY--PRDFD 267 (358)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~-~~~~~~---~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d 267 (358)
+|+..+..|.|+.. ......+.......+ +...+. ...|++++++.+. .++++|++++..+ |...+
T Consensus 130 ~ii~~~~~yhg~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~aviiep~~~~~G~~~~ 201 (398)
T PRK03244 130 KIVAAEGGFHGRTM-------GALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVD-DDTAAVFLEPIQGEAGVVPP 201 (398)
T ss_pred eEEEECCCcCCccH-------HHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhc-CCeEEEEEecccCCCCCcCC
Confidence 66666544433211 011111210000000 000000 0137899998875 3678888876543 34444
Q ss_pred ----HHHHHHHHHHcCCEEEEeccccccccccCCcc-CC-CC-CCcEEEEcCcCcCc-cCcEEEEEEeCCCCchhHHHHH
Q 018300 268 ----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DP-FK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESA 339 (358)
Q Consensus 268 ----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~-~p-l~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~~~~~~~~~ 339 (358)
+++|.++|+++|+++|+|++|+ |+...|... .. .+ ..|++++ .|+|+ |.+.|+++.++ ++.+.
T Consensus 202 ~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~------~~~~~ 272 (398)
T PRK03244 202 PAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAFG------PAADL 272 (398)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEcH------HHHhh
Confidence 8899999999999999999986 543333211 11 12 4677755 59995 44567777776 45555
Q ss_pred Hh
Q 018300 340 IN 341 (358)
Q Consensus 340 i~ 341 (358)
+.
T Consensus 273 ~~ 274 (398)
T PRK03244 273 LT 274 (398)
T ss_pred cc
Confidence 44
No 287
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.03 E-value=2.3e-08 Score=104.39 Aligned_cols=173 Identities=20% Similarity=0.177 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc-------CC------------------C---
Q 018300 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK-------PH------------------D--- 193 (358)
Q Consensus 144 ~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~-------pG------------------D--- 193 (358)
+....+|+.+-+++++++|.+. .|| +++++||.||+.++.+. .+ .+ |
T Consensus 119 P~~t~lE~~vi~~la~l~G~~~-~~G--~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~ 195 (608)
T TIGR03811 119 PATSQMEEEVGKEFATLMGYKN-GWG--HIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIM 195 (608)
T ss_pred chHHHHHHHHHHHHHHHhCCCC-CCe--EEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccc
Confidence 3455799999999999999986 465 45678999998876442 11 00 0
Q ss_pred ----------------------------EEEecCCCCCcccccccccchhccccCCceE-EEEeceecCCCCCCCHHHHH
Q 018300 194 ----------------------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLE 244 (358)
Q Consensus 194 ----------------------------~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~iD~d~le 244 (358)
+|+++. .+|+|. .|++.+.|... .++.+++| +++.+|+++|+
T Consensus 196 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~---~aHyS~-----~KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L~ 266 (608)
T TIGR03811 196 DLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQ---TKHYSW-----LKAADIIGIGLDQVIPVPVD-SNYRMDINELE 266 (608)
T ss_pred ccccccccchhhhhhhccccccccccceEEEECC---CccHHH-----HHHHHHcCCCcccEEEeecC-CCCcCCHHHHH
Confidence 244433 245442 13445566542 23455566 46799999999
Q ss_pred HHhhhc----CCe-EEEE--cCCCCCCCCCHHHHHHHH---HHcCC--EEEEecccccccc----ccC------------
Q 018300 245 KTAILF----RPK-LIIA--GASAYPRDFDYPRMRQIA---DAVGA--LLMMDMAHISGLV----AAS------------ 296 (358)
Q Consensus 245 ~~i~~~----~~k-lIi~--~~s~~~~~~dl~~I~~ia---~e~g~--~livD~Ah~~Gl~----~~g------------ 296 (358)
+.+++. .|- .|+. +.+..|.+-|+++|.++| +++|+ ++++|+|+. |.. ...
T Consensus 267 ~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyG-G~~~~l~~~~~~~~~p~~~~~~ 345 (608)
T TIGR03811 267 KIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYG-GYGRAIFLDEDDNFIPYDDLQE 345 (608)
T ss_pred HHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeecccc-chhhhhhccccccccccchhhc
Confidence 888532 222 2332 455677788899999998 66887 699999976 321 110
Q ss_pred ------Cc------c--------CCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 297 ------VV------A--------DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 297 ------~~------~--------~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.+ . ..+++||-++..+||++..|-+ |+++.++.
T Consensus 346 ~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~ 399 (608)
T TIGR03811 346 VHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI 399 (608)
T ss_pred ccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH
Confidence 00 0 0134799999999999988865 88888876
No 288
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=2.5e-09 Score=105.07 Aligned_cols=186 Identities=21% Similarity=0.183 Sum_probs=126.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcH-HHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~-~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~p 191 (358)
+..+.+.+++. +|.....++|...|+. ...++|+ ..++++|.+++ +.+.-|...|...+.+++.|
T Consensus 155 ~ca~~~~~~~~-----kygl~~css~~e~G~~~~hkelE~----l~A~f~g~e~a-----~vF~mGf~TNs~~~p~l~~~ 220 (519)
T KOG1357|consen 155 PCAEASLKSFD-----KYGLSRCSSRHEAGTTEEHKELEE----LVARFLGVEDA-----IVFSMGFATNSMNIPSLLGK 220 (519)
T ss_pred cCChHHHHHHH-----HhcccccccchhcccHHHHHHHHH----HHHHhcCCcce-----EEEeccccccccCcceeecC
Confidence 34667777764 3333344455555553 3345555 47899999984 55778888888899999999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---------cCC--eEEEEcC-
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---------FRP--KLIIAGA- 259 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---------~~~--klIi~~~- 259 (358)
|..|+...+.|.+-.. .+.++|...++.. . -|.++||+++++ ++| |++++..
T Consensus 221 gsLIiSDelNHaSi~~--------GaRLSgAtiRVfk--H------Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iiveg 284 (519)
T KOG1357|consen 221 GSLIISDELNHASLIT--------GARLSGATTRVFR--H------NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEG 284 (519)
T ss_pred Ccceeeccccchheec--------cccccCceEEEEe--c------CCHHHHHHHHHHHHhcCCCCcCCcchheeeeecc
Confidence 9999998887765322 3356776544433 2 255666666543 233 4555543
Q ss_pred --CCCCCCCCHHHHHHHHHHcCCEEEEecccccccccc-CC----ccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 260 --SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV----VADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 260 --s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~----~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
+.-+.+.++.++.+++|++.++|+.|+||+.|.... |. ++.+=+ .+|++.+++.|+++ --||.|.++++
T Consensus 285 iysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfg-a~GGyiagsk~ 361 (519)
T KOG1357|consen 285 IYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFG-AAGGYIAGSKE 361 (519)
T ss_pred ceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcc-cccceecCcHH
Confidence 334678999999999999999999999999998742 21 111111 68999999999864 56899998884
No 289
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.02 E-value=5.8e-09 Score=103.30 Aligned_cols=196 Identities=16% Similarity=0.141 Sum_probs=113.1
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC--
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH-- 192 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG-- 192 (358)
+|.|.+++...+.... +....| ..+ .+....+++++++|.+. .++++||++|+.+++..+..++
T Consensus 57 ~p~v~~a~~~~~~~~~---~~~~~~--~~~----~~~~la~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~ 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKLI---HTSNLY--YIE----PQEELAEKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK 122 (396)
T ss_pred CHHHHHHHHHHHhhcc---cccccc--CCH----HHHHHHHHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence 4788888877664321 111111 123 33345566778877643 3566789999999998765443
Q ss_pred -----CEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCCC---CCCCHHHHHHHhhhcCCeEEEEcCCCCC
Q 018300 193 -----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGASAYP 263 (358)
Q Consensus 193 -----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~iD~d~le~~i~~~~~klIi~~~s~~~ 263 (358)
++|++.+..+.|.... .+...+.. +.....++.++. ...|++++++.+. .++++|++++..++
T Consensus 123 ~~~~~~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~~~ 194 (396)
T PRK02627 123 KGIEKPEIITAENSFHGRTLA-------TLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQGE 194 (396)
T ss_pred cCCCCCeEEEECCCcCcccHH-------HHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC-CCeEEEEEecccCC
Confidence 6788876544332110 11111110 000001111100 0228899999885 36888888754432
Q ss_pred ---CCC---CHHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC-CCcEEEEcCcCcCc-cCcEEEEEEeCCCCch
Q 018300 264 ---RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLG 333 (358)
Q Consensus 264 ---~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~~~ 333 (358)
... .+++|.++|+++|+++++|++|. |+...+.... .++ ..|+++ +.|.+. |.+.|++++++
T Consensus 195 ~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~t--~sK~~~~G~rig~~~~~~----- 266 (396)
T PRK02627 195 GGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIMT--LAKGLGGGVPIGAVLAKE----- 266 (396)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEEE--EcchhhCCcccEEEEEcH-----
Confidence 122 38999999999999999999987 5543332111 112 346664 569985 45678888876
Q ss_pred hHHHHHHh
Q 018300 334 VELESAIN 341 (358)
Q Consensus 334 ~~~~~~i~ 341 (358)
++.+.+.
T Consensus 267 -~~~~~~~ 273 (396)
T PRK02627 267 -KVADVFT 273 (396)
T ss_pred -HHHhccC
Confidence 4555554
No 290
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=98.99 E-value=1.8e-08 Score=100.53 Aligned_cols=196 Identities=17% Similarity=0.144 Sum_probs=112.3
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
-+|.|.+++.+.+.+-+.. +..+ .++...+ ..++++++++.+. ..+++||++||..++....
T Consensus 52 ~~p~v~~a~~~~~~~~~~~---~~~~--~~~~~~~----la~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~ 117 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHI---GNGY--TNEPVLR----LAKKLVDATFADK-----VFFCNSGAEANEAALKLARRYAL 117 (397)
T ss_pred CCHHHHHHHHHHHHhcccc---cCcc--CCHHHHH----HHHHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 4788888887776542211 1111 1232223 3455777877543 4667899999999998651
Q ss_pred ----cCCCEEEecCCCCCcccccccccchhccccCCce-----EEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
...++|+..+-.+.| +... .+...+.. +...+-++. .-...|++++++.+.+ ++++|++++.
T Consensus 118 ~~~~~~r~~ii~~~~~yHG-----~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~aavi~Epi 188 (397)
T TIGR03246 118 DKHGADKSEIVAFKNSFHG-----RTLF--TVSVGGQPKYSQGFAPLPGGIK-HAPYNDLAAAKALISD-KTCAVIVEPI 188 (397)
T ss_pred hcCCCCCCEEEEECCCcCC-----ccHH--HHHhcCCcccccCCCCCCCceE-EeCCCCHHHHHHHhcc-CeEEEEEecc
Confidence 123567776533222 2100 11122210 000000000 0012488999998863 6788888754
Q ss_pred C--CCC----CCCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcC-ccCcEEEEEEeCCC
Q 018300 261 A--YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP 330 (358)
Q Consensus 261 ~--~~~----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L-~Gp~GG~I~~~~~~ 330 (358)
. .+. ...+++|+++|++||+++|+|++| .|+...|... ..++ ..|++ ++.|.| +|.+.|++++++
T Consensus 189 ~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lggG~pigav~~~~-- 263 (397)
T TIGR03246 189 QGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTT-- 263 (397)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE--EeehhhhCCcceeEEEEcH--
Confidence 3 222 233899999999999999999999 5764334321 1122 45776 557999 556678888876
Q ss_pred CchhHHHHHHh
Q 018300 331 VLGVELESAIN 341 (358)
Q Consensus 331 ~~~~~~~~~i~ 341 (358)
++.+.++
T Consensus 264 ----~i~~~~~ 270 (397)
T TIGR03246 264 ----EIAAHLK 270 (397)
T ss_pred ----HHHHhcc
Confidence 5555554
No 291
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.98 E-value=1e-08 Score=101.05 Aligned_cols=198 Identities=19% Similarity=0.141 Sum_probs=112.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pG 192 (358)
.+|.|.+++.+.+.+... .+..+ .. +++..+.+++.+.++.+. .++++||++|+..++... ..+|
T Consensus 46 ~~p~v~~a~~~~~~~~~~---~~~~~--~~----~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~g 111 (377)
T PRK02936 46 CHPTVTKAVQEQLDDIWH---VSNLF--TN----SLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHTG 111 (377)
T ss_pred CCHHHHHHHHHHHHhccc---ccccc--CC----HHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhcC
Confidence 578888888777654211 11111 12 344445566666665432 366789999999999854 2344
Q ss_pred -CEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCCC---CCCCHHHHHHHhhhcCCeEEEEcCCCC--CC-
Q 018300 193 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGASAY--PR- 264 (358)
Q Consensus 193 -D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~iD~d~le~~i~~~~~klIi~~~s~~--~~- 264 (358)
++|++.+..+.|... + .+...+.. +..-..++.++. ...|++++++.+.. ++++|++++... |.
T Consensus 112 ~~~vi~~~~~~Hg~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~~ 183 (377)
T PRK02936 112 KSKIVTFEQSFHGRTF-G------TMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGVI 183 (377)
T ss_pred CCeEEEECCCcCCCcH-H------hhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCCc
Confidence 568887654332211 0 11111110 000000011110 12278999998753 678888865432 21
Q ss_pred ---CCCHHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC-CCcEEEEcCcCcCc-cCcEEEEEEeCCCCchhHHH
Q 018300 265 ---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE 337 (358)
Q Consensus 265 ---~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~~~~~~~ 337 (358)
..++++|.++|++||+++++|++|. |+...|.... .+. ..|++ +++|++. |.++|++++++ ++.
T Consensus 184 ~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~------~~~ 254 (377)
T PRK02936 184 PADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKK------ELG 254 (377)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcH------HHH
Confidence 1238999999999999999999985 6544442111 111 34665 5689984 45788998876 565
Q ss_pred HHHhh
Q 018300 338 SAINN 342 (358)
Q Consensus 338 ~~i~~ 342 (358)
+.+..
T Consensus 255 ~~~~~ 259 (377)
T PRK02936 255 TAFGP 259 (377)
T ss_pred hhccC
Confidence 65543
No 292
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.96 E-value=3.2e-08 Score=98.77 Aligned_cols=191 Identities=17% Similarity=0.123 Sum_probs=111.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---c-
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al---l- 189 (358)
-+|.|.+++...+.+....+ .....+...+ +.++++++++.+. ..+++||++||..++... .
T Consensus 57 ~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~----l~~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~~ 122 (403)
T PRK05093 57 CHPALVKALKEQGEKLWHIS-----NVFTNEPALR----LAKKLIDATFAER-----VFFANSGAEANEAAFKLARRYAC 122 (403)
T ss_pred CCHHHHHHHHHHHHhcCccc-----CccCCHHHHH----HHHHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHHh
Confidence 58888888887765422111 1112332223 3445777776543 467789999999999754 1
Q ss_pred ----cCCCEEEecCCC-CCcccccccccchhccccCCc-----eE-----EEEeceecCCCCCCCHHHHHHHhhhcCCeE
Q 018300 190 ----KPHDRIMGLDLP-HGGHLSHGFMTPKRRVSGTSI-----YF-----ESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (358)
Q Consensus 190 ----~pGD~Vl~~~~~-~ggh~s~~~~~~~~~~~~~g~-----~~-----~~~~~~~~~~~~~iD~d~le~~i~~~~~kl 254 (358)
...++|+..+-. ||.+.. .+...+. .+ ....+ ...|++++++.+.. ++++
T Consensus 123 ~~~~~~~~~ii~~~~~~HG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~~~l~~~l~~-~~aa 187 (403)
T PRK05093 123 DRHGPEKTEIIAFHNSFHGRTLF--------TVSVGGQPKYSDGFGPKPADITHV------PFNDLAAVKAVIDD-HTCA 187 (403)
T ss_pred hcCCCCCCeEEEEcCCcCCchhh--------hHhhcCChhhhhcCCCCCCCcEEe------CCCCHHHHHHHhcC-CeEE
Confidence 123467766643 332210 1111110 00 01111 12388999988753 6888
Q ss_pred EEEcCCC-CCCC-----CCHHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC-CCcEEEEcCcCcC-ccCcEEEE
Q 018300 255 IIAGASA-YPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMI 324 (358)
Q Consensus 255 Ii~~~s~-~~~~-----~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~-gaDiv~~S~hK~L-~Gp~GG~I 324 (358)
|++++.+ .+.. ..+++|.++|++||+++|+|++|. |+...|.... .++ ..|+. |+.|++ +|.+.|++
T Consensus 188 iiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--s~sK~l~~G~rig~v 264 (403)
T PRK05093 188 VVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPIGAM 264 (403)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCCEE--EecccccCCcceEEE
Confidence 8887433 1222 228999999999999999999988 7654443211 111 34655 567998 56778999
Q ss_pred EEeCCCCchhHHHHHHhh
Q 018300 325 FFKKDPVLGVELESAINN 342 (358)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~ 342 (358)
++++ ++.+.+..
T Consensus 265 v~~~------~i~~~l~~ 276 (403)
T PRK05093 265 LTTA------EIASHFKV 276 (403)
T ss_pred EEcH------HHHhhcCC
Confidence 9887 56555543
No 293
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=98.94 E-value=4.8e-08 Score=97.35 Aligned_cols=193 Identities=14% Similarity=0.087 Sum_probs=111.8
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
.+|.|.+++...+.. +..+. +.+ ..+...++ .+++++++|.+. .++++||++||..++....
T Consensus 54 ~~p~v~~a~~~~~~~-~~~~~---~~~-~~~~~~~l----~~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-LTLSS---RAF-YNDVFGEF----AEYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHHh-ccccc---ccc-CCHHHHHH----HHHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 478888888876643 22111 111 22323333 445778888543 4678899999999998741
Q ss_pred -----cC-CCEEEecCCCCCcccccccccchhccccCCce-----E-----EEEeceecCCCCCCCHHHHHHHhhhc--C
Q 018300 190 -----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILF--R 251 (358)
Q Consensus 190 -----~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~~iD~d~le~~i~~~--~ 251 (358)
.+ .++|+.....|.|... ..+...+.. + ....++ ..|++++++.++.. +
T Consensus 120 ~~~~~~~~~~~i~~~~~~yhg~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNFHGRTL-------GAISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPN 186 (401)
T ss_pred hhcCCCCCCCEEEEECCCcCcccH-------HHHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCC
Confidence 23 3566666544333210 011222110 0 011111 23789999887543 3
Q ss_pred CeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC-CCcEEEEcCcCcCcc--Cc
Q 018300 252 PKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLRG--PR 320 (358)
Q Consensus 252 ~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~-gaDiv~~S~hK~L~G--p~ 320 (358)
..+|++++. ..|...+ +++|.++|++||+++++|++|. |+...|.... ..+ ..|++++| |.|.| .+
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-GLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHHhhcCCCCCEEEee--ccccCCCCC
Confidence 346666543 2344443 8999999999999999999994 6543443211 112 46888765 99865 45
Q ss_pred EEEEEEeCCCCchhHHHHHHhh
Q 018300 321 GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 321 GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
-|++++++ ++.+.+..
T Consensus 264 ig~v~~~~------~i~~~~~~ 279 (401)
T TIGR01885 264 VSAVLADD------DVMLTIKP 279 (401)
T ss_pred cEEEEEcH------HHHhhccC
Confidence 57788776 55555543
No 294
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=98.86 E-value=6.6e-08 Score=97.06 Aligned_cols=196 Identities=20% Similarity=0.159 Sum_probs=114.1
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
+.+|.|.+++...+.+.. . |...++. .. ..++++++++.... ..++++||++|+..++... ..
T Consensus 64 h~~p~v~~ai~~q~~~~~--~-----~~~~~~~---~~-~lae~l~~~~~~~~----~v~~~~sGseA~e~Alk~ar~~~ 128 (423)
T TIGR00713 64 HAHPRVVEAVKEALERGT--S-----YGAPTEA---EI-LLAKEIISRVPSVE----MVRFVNSGTEATMSAVRLARGYT 128 (423)
T ss_pred CCCHHHHHHHHHHHHhCC--c-----CCCCCHH---HH-HHHHHHHHhCCccc----EEEEeCCHHHHHHHHHHHHHHhh
Confidence 568999999888775421 1 1111221 22 24556777775432 2356789999999988753 33
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCce-E---------E---EEeceecCCCCCCCHHHHHHHhhh--cCCeEE
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-F---------E---SMPYRLDESTGLVDYDMLEKTAIL--FRPKLI 255 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~---------~---~~~~~~~~~~~~iD~d~le~~i~~--~~~klI 255 (358)
..++|++.+..|.|+... . ......+.. + . ...+.+. ..|++++++.+.. .++++|
T Consensus 129 gr~~ii~~~~~yhG~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~i~~~~~~~aav 199 (423)
T TIGR00713 129 GRDKIIKFEGCYHGHHDA-L----LVKAGSGAATLGLPTSPGVPEDFAKLTLVLP----YNDLEALEEVFEEYGEEIAGV 199 (423)
T ss_pred CCCEEEEEcCCCCCChhh-h----hccccCcccccCCCCCCCCCcccccceEEeC----CCCHHHHHHHHHHcCCcEEEE
Confidence 568999887655443110 0 000000000 0 0 0001111 1388999988863 256777
Q ss_pred EEcC--CCCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc-CCCC-CCcEEEEcCcCcCc-cCcEEEEEE
Q 018300 256 IAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK-YCDVVTTTTHKSLR-GPRGGMIFF 326 (358)
Q Consensus 256 i~~~--s~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~-~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~ 326 (358)
++++ ++.|...+ +++|.++|+++|+++|+|++|. |+..+.... ..++ ..|++ ++.|.++ |.+.|++++
T Consensus 200 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~r~g~~~~~~~~~~~pDi~--t~sK~l~~G~pig~v~~ 276 (423)
T TIGR00713 200 IVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT-GFRVALGGAQEYFGVEPDLT--TLGKIIGGGLPVGAFGG 276 (423)
T ss_pred EEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-ccccCcchhHHHhCCCcchh--hhhhhhcCCCceeeeeE
Confidence 7752 33344333 7899999999999999999985 664321111 1122 34655 5789984 567899999
Q ss_pred eCCCCchhHHHHHHh
Q 018300 327 KKDPVLGVELESAIN 341 (358)
Q Consensus 327 ~~~~~~~~~~~~~i~ 341 (358)
++ ++.+.+.
T Consensus 277 ~~------~i~~~~~ 285 (423)
T TIGR00713 277 RR------EIMERLA 285 (423)
T ss_pred HH------HHHHhhC
Confidence 87 5666664
No 295
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.82 E-value=1.7e-07 Score=93.04 Aligned_cols=199 Identities=20% Similarity=0.160 Sum_probs=123.3
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccCC
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~pG 192 (358)
+|.|.+|+.+.+.+..+.|.|. ++|-.+.+.+.+++..-.. .-+++|||+|++.+++.- .-..
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e~----vrfvnSGTEAtmsAiRlARa~TgR 135 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIEK----VRFVNSGTEATMSAIRLARAYTGR 135 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCcccE----EEEecchhHHHHHHHHHHHHhhCC
Confidence 7789999988887766655554 3555566788888887432 234689999999998653 3456
Q ss_pred CEEEecCCCCCcccccccccchhc-c-----ccCCce----EEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcC-
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRR-V-----SGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA- 259 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~-~-----~~~g~~----~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~- 259 (358)
|+|+..+-.|.||.-...+..... . ...|.. -..+.++ .-|++.++++++.. +...|++++
T Consensus 136 ~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~------yND~~al~~~~~~~g~~IAaVIvEPv 209 (432)
T COG0001 136 DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP------YNDLEALEEAFEEYGDDIAAVIVEPV 209 (432)
T ss_pred CeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec------CCCHHHHHHHHHHcCCcEEEEEeccc
Confidence 889888766655533211100000 0 001110 0111111 34889999998765 455677765
Q ss_pred -CCCCCCCC----HHHHHHHHHHcCCEEEEecccccccccc-CCccCCCC-CCcEEEEcCcCcCc-cCcEEEEEEeCCCC
Q 018300 260 -SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPV 331 (358)
Q Consensus 260 -s~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~~~~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~ 331 (358)
.|.|.+.+ ++.++++|+|+|++||.|+.+. |+... +-.+.-+. ..|+. ++-|-++ |..-|++-+++
T Consensus 210 ~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViT-GFR~~~gGaq~~~gi~PDlt--tlGKiIGGGlP~ga~gGr~--- 283 (432)
T COG0001 210 AGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVIT-GFRVALGGAQGYYGVEPDLT--TLGKIIGGGLPIGAFGGRA--- 283 (432)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchh-hcccCCcccccccCcCcchh--hhhhhhcCCcceeeeccHH---
Confidence 34454333 8899999999999999999876 44322 21222222 45776 4559885 45668888877
Q ss_pred chhHHHHHHhhc
Q 018300 332 LGVELESAINNA 343 (358)
Q Consensus 332 ~~~~~~~~i~~~ 343 (358)
++.+.+...
T Consensus 284 ---eiM~~~~p~ 292 (432)
T COG0001 284 ---EIMEQLAPL 292 (432)
T ss_pred ---HHHhhhCCC
Confidence 677766553
No 296
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.82 E-value=5.9e-08 Score=94.78 Aligned_cols=156 Identities=19% Similarity=0.195 Sum_probs=94.3
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
.++.+++++|+...+ +|.+++|+. ++..+ ..+++||| |++.+|.+..+.. .+...|. ++++++.
T Consensus 58 L~~~ia~~~~~~~~~---~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~~--------~~~~~g~--~~~~v~~ 122 (339)
T PRK06959 58 LAACAARYYGAPDAA---HVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYAP--------AFARHGH--RVVPLDE 122 (339)
T ss_pred HHHHHHHHhCCCCcc---cEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHHH--------HHHHCCC--EEEeecc
Confidence 355688999997421 577788876 66544 45678887 7777776655422 2344565 4445444
Q ss_pred cCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHH---HHHHcCCEEEEeccccccccccCCccCCC-CCC
Q 018300 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQ---IADAVGALLMMDMAHISGLVAASVVADPF-KYC 305 (358)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~---ia~e~g~~livD~Ah~~Gl~~~g~~~~pl-~ga 305 (358)
++ +.+++ ..+++++..++|| ...+.+++.+ .|++++.++++|+++. .+...... ..+ +.-
T Consensus 123 ~~-------~~~~~-----~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~-~~~~~~s~-~~~~~~~ 188 (339)
T PRK06959 123 AA-------DTLPA-----ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTLPAASL-AAHTDRP 188 (339)
T ss_pred cc-------hhccc-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCc-cCCCcccc-hhccCCC
Confidence 31 22221 3456666556665 4666555554 4667899999999976 33211100 011 111
Q ss_pred -cEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 306 -DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 306 -Div~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
=+++.|++|.+ +|.|-|++++++ ++.+++...
T Consensus 189 ~vi~l~SfSK~~gl~GlRiGy~v~~~------~li~~l~~~ 223 (339)
T PRK06959 189 GLVVLRSVGKFFGLAGVRAGFVLAAP------ALLAALRDA 223 (339)
T ss_pred CEEEEecChhhcCCcchheEEEecCH------HHHHHHHHh
Confidence 27789999986 678889999976 566666554
No 297
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.82 E-value=6.1e-08 Score=96.99 Aligned_cols=198 Identities=19% Similarity=0.133 Sum_probs=113.6
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
-+|.|.+|+.+.+..-... +..+ .++.. + ...++++++++.+. .++++||++|+..++....
T Consensus 56 ~~p~v~~A~~~~~~~~~~~---~~~~--~~~~~---~-~la~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~ 121 (406)
T PRK12381 56 AHPALREALNEQASKFWHT---GNGY--TNEPV---L-RLAKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAH 121 (406)
T ss_pred CCHHHHHHHHHHHhhcccc---cCcc--CCHHH---H-HHHHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHh
Confidence 3788888888776532111 1111 12222 2 24456777776543 4667899999999997641
Q ss_pred ----cCCCEEEecCCCCCcccccccccchhccccCCce-EEEEeceecC---CCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 018300 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDE---STGLVDYDMLEKTAILFRPKLIIAGASA 261 (358)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~---~~~~iD~d~le~~i~~~~~klIi~~~s~ 261 (358)
.+.++|+..+..|.|... + .+...+.. +..-.-++.+ .....|++++++.+.. ++++|++++..
T Consensus 122 ~~~~~~r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiEPv~ 193 (406)
T PRK12381 122 DRYGSHKSGIVAFKNAFHGRTL-F------TVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVEPIQ 193 (406)
T ss_pred hcCCCCCCeEEEECCCcCCcch-h------HHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEeCCc
Confidence 245678887654433211 0 11222210 0000000000 0113588999998863 67888886432
Q ss_pred -C-CC----CCCHHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC-CCcEEEEcCcCcC-ccCcEEEEEEeCCCC
Q 018300 262 -Y-PR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (358)
Q Consensus 262 -~-~~----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~-gaDiv~~S~hK~L-~Gp~GG~I~~~~~~~ 331 (358)
. +. ...+++|+++|++||+++|+|++| .|+...|.... .++ ..|++ |+.|.| +|.+.|++++++
T Consensus 194 ~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~--- 267 (406)
T PRK12381 194 GEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTE--- 267 (406)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCEE--EehhhhhCCCceEEEEEcH---
Confidence 1 21 234899999999999999999998 46644443211 112 35664 667999 566778888876
Q ss_pred chhHHHHHHhh
Q 018300 332 LGVELESAINN 342 (358)
Q Consensus 332 ~~~~~~~~i~~ 342 (358)
++.+.+..
T Consensus 268 ---~~~~~~~~ 275 (406)
T PRK12381 268 ---KCASVMTV 275 (406)
T ss_pred ---HHHhhcCC
Confidence 56665543
No 298
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.80 E-value=1.4e-07 Score=94.10 Aligned_cols=190 Identities=17% Similarity=0.143 Sum_probs=106.2
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc-----
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----- 189 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all----- 189 (358)
+|.|.+++.+.+.. ...++. .++ + +.+....+++.+..+.+. .++++||++|+..++....
T Consensus 54 ~p~v~~a~~~q~~~-~~~~~~--~~~--~----~~~~~la~~l~~~~~~~~-----v~f~~SGseA~e~Aik~ar~~~~~ 119 (395)
T PRK03715 54 NPGMVEALAAQAEK-LINPSP--AFY--N----EPMAKLAGLLTQHSCFDK-----VFFANSGAEANEGAIKLARKWGRK 119 (395)
T ss_pred CHHHHHHHHHHHHh-cccccc--ccc--C----HHHHHHHHHHhhccCCCE-----EEEeCCcHHHHHHHHHHHHHHhhc
Confidence 67788777766543 211111 111 1 233334455555544332 4678899999999997763
Q ss_pred -cCC-CEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCC---CCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 190 -KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 190 -~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~---~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
++| ++|+..+..+ |++... .+...+.. ++....+..+. ....|++++++.+.+ ++.+|++++..
T Consensus 120 ~~~~r~~ii~~~~~y-----HG~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~~ 191 (395)
T PRK03715 120 HKNGAYEIITFDHSF-----HGRTLA--TMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQGE 191 (395)
T ss_pred cCCCCcEEEEECCCc-----CCChHH--HHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcCC
Confidence 133 5677766433 222111 12222211 11000001100 113578899988753 57788887532
Q ss_pred CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCcc-CcEEEEEEeCC
Q 018300 262 YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKD 329 (358)
Q Consensus 262 ~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~~ 329 (358)
.|...+ +++|.++|+++|+++|+|++|+ |+.-.|.. . .-++ ..|+++++ |.|+| -..|.++++++
T Consensus 192 gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~~ 264 (395)
T PRK03715 192 GGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKAE 264 (395)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceeeeh--hhhhCCcceEEEEEccc
Confidence 233444 8999999999999999999998 65333331 1 1122 46887664 99965 23566677664
No 299
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=98.77 E-value=2.9e-07 Score=89.88 Aligned_cols=165 Identities=18% Similarity=0.162 Sum_probs=109.6
Q ss_pred eEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC-CCCHHHHHHHhhh
Q 018300 171 NVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-LVDYDMLEKTAIL 249 (358)
Q Consensus 171 ~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~iD~d~le~~i~~ 249 (358)
.|....+|.||.++...|..|||..+++.|-|+|.-.+. --..| ++++|+.+..+++ .|+.+++|+.+..
T Consensus 149 ~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl-------~~rTg--veivpv~c~Ss~~f~itv~alE~A~~~ 219 (471)
T KOG0256|consen 149 VVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDL-------RWRTG--VEIVPVHCSSSNGFQITVEALEAALNQ 219 (471)
T ss_pred eEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccc-------eeccC--ceEEEEEeecCCCccccHHHHHHHHHH
Confidence 455667778999999999999999999999888753211 11345 4667776766555 8999999887643
Q ss_pred -----cCCe-EEEEcCCC-CCCCCC---HHHHHHHHHHcCCEEEEeccccccccccCC-ccCCCC-------CCc--EEE
Q 018300 250 -----FRPK-LIIAGASA-YPRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK-------YCD--VVT 309 (358)
Q Consensus 250 -----~~~k-lIi~~~s~-~~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~pl~-------gaD--iv~ 309 (358)
.+.| +|+++++| .|...+ +..+..+|.++++-||+|+.++ |-+++.. +.+-++ .-| -++
T Consensus 220 A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya-~sVF~~~~F~Sv~ev~~~~~~~~~rvHiv 298 (471)
T KOG0256|consen 220 ARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA-GSVFDKSEFRSVLEVRKDPHLDPDRVHIV 298 (471)
T ss_pred HHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc-ccccCccCceEHHHHhhccccCCCcEEEE
Confidence 2455 45556554 355554 6677789999999999999865 4444322 211111 111 345
Q ss_pred EcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhccCCcccc
Q 018300 310 TTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQV 350 (358)
Q Consensus 310 ~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~ 350 (358)
-|++|-| +|.|-|+|++.++ ++..........+..+
T Consensus 299 yslSKD~GlpGfRvGviYS~ne-----~VvsaA~kmssf~~vS 336 (471)
T KOG0256|consen 299 YSLSKDFGLPGFRVGVIYSNNE-----DVVSAATKMSSFGLVS 336 (471)
T ss_pred EEeccccCCCceEEEEEEecCh-----HHHHHHHHHhhccCCc
Confidence 6888885 6778899999987 6666555544444433
No 300
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.77 E-value=2.2e-07 Score=93.78 Aligned_cols=195 Identities=17% Similarity=0.066 Sum_probs=105.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
.-+|.|.+++...+.. ...+..+. + .++ .+....+++++++.-..+ ..++.+||++|+..++... ..
T Consensus 59 h~~p~v~~a~~~q~~~-~~~~~~~~-~--~~~----~~~~la~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~t 127 (433)
T PRK08117 59 HRHPKVVQAIKEQADK-LMHGPSGV-I--YYE----SILKLAEELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVT 127 (433)
T ss_pred CCCHHHHHHHHHHHHh-ccCccccc-c--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhc
Confidence 3578888888876643 22221111 1 122 222345567778732221 2355689999999999753 22
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCC-------------ceEEEEeceec---CCC---C---CCCHHHHHHHhh
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLD---EST---G---LVDYDMLEKTAI 248 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~~~~~~~---~~~---~---~iD~d~le~~i~ 248 (358)
...+|+..+-.| ||+... .+...+ ..+..++++-. +.. . .-|+++++++++
T Consensus 128 gr~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 200 (433)
T PRK08117 128 KRPYIISFTGCF-----HGRTLG--ALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFK 200 (433)
T ss_pred CCCeEEEECCCc-----CCcCHH--HHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHH
Confidence 335677765322 332110 000110 00112222110 000 0 125667777664
Q ss_pred h----cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCc
Q 018300 249 L----FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKS 315 (358)
Q Consensus 249 ~----~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~ 315 (358)
. .++..|++++- ..|...+ +++++++|++||+++|+|++|. |+...|... ..++ -.|+ .++.|.
T Consensus 201 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~ 277 (433)
T PRK08117 201 HQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKG 277 (433)
T ss_pred hccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhh
Confidence 2 23556777642 2344455 9999999999999999999998 764444211 1122 3466 477799
Q ss_pred Cc-cCcEEEEEEeC
Q 018300 316 LR-GPRGGMIFFKK 328 (358)
Q Consensus 316 L~-Gp~GG~I~~~~ 328 (358)
|+ |.+.|++++++
T Consensus 278 lg~G~pigav~~~~ 291 (433)
T PRK08117 278 IASGLPLSAVVASK 291 (433)
T ss_pred ccCCCcceeEEEcH
Confidence 95 45667888876
No 301
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.75 E-value=1.1e-07 Score=97.12 Aligned_cols=151 Identities=21% Similarity=0.247 Sum_probs=106.4
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHH---HHHHHHHHhc-cCCC----EEEecCCCCCcccccccccchhccccCCceE
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSP---ANFEVYTAIL-KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~---A~~~a~~all-~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~ 224 (358)
.+++++++.|.|. ..++++||.+ |-..++++++ .+|+ ..+++-..||-++. .+.+.|-
T Consensus 587 Le~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA~Magm-- 652 (1001)
T KOG2040|consen 587 LEKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SAAMAGM-- 652 (1001)
T ss_pred HHHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hHHhcCC--
Confidence 4667899999987 5789999986 5555667763 4454 34555555655433 2345564
Q ss_pred EEEeceecCCCCCCCHHHHHHHhhhcCCe--EEEEc-CCCCCC-CCCHHHHHHHHHHcCCEEEEeccccccccccCCccC
Q 018300 225 ESMPYRLDESTGLVDYDMLEKTAILFRPK--LIIAG-ASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (358)
Q Consensus 225 ~~~~~~~~~~~~~iD~d~le~~i~~~~~k--lIi~~-~s~~~~-~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~ 300 (358)
++++++.+ .+|.||+.+|++++++++-+ .+.+. +|.+|. ..++++++++.+++|--|..|+|....-++ +..
T Consensus 653 kvvpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG---lc~ 728 (1001)
T KOG2040|consen 653 KVVPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG---LCR 728 (1001)
T ss_pred EEEEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceec---ccC
Confidence 66777777 47899999999988776433 34444 455664 678999999999999999999987643321 235
Q ss_pred CCC-CCcEEEEcCcCcCccCcE
Q 018300 301 PFK-YCDVVTTTTHKSLRGPRG 321 (358)
Q Consensus 301 pl~-gaDiv~~S~hK~L~Gp~G 321 (358)
|-+ |+|++-..+||+|+-|.|
T Consensus 729 pGd~GaDV~HLNLHKTFcIPHG 750 (1001)
T KOG2040|consen 729 PGDIGADVCHLNLHKTFCIPHG 750 (1001)
T ss_pred CccccccceeecccceeeecCC
Confidence 556 999999999999955543
No 302
>PLN02624 ornithine-delta-aminotransferase
Probab=98.74 E-value=5.1e-07 Score=92.25 Aligned_cols=191 Identities=18% Similarity=0.152 Sum_probs=107.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
-+|.|.+++.+.+.. +..+. ..+. ++...+ ..++++++++.+. .++.+||++|+..++.....
T Consensus 92 ~~p~v~~ai~~ql~~-~~~~~--~~~~--~~~~~~----la~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~ 157 (474)
T PLN02624 92 CHPKIIKALTEQAEK-LTLSS--RAFY--NDKFPE----FAEYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGY 157 (474)
T ss_pred CCHHHHHHHHHHHHh-cCCcc--cccC--CHHHHH----HHHHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHH
Confidence 389999999887754 32221 1221 222222 3455778887543 36678999999999863321
Q ss_pred -----C-CC-EEEecCCCCCcccccccccchhccccCCceEEEEec-eecCCC---CCCCHHHHHHHhhhc--CCeEEEE
Q 018300 191 -----P-HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILF--RPKLIIA 257 (358)
Q Consensus 191 -----p-GD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~-~~~~~~---~~iD~d~le~~i~~~--~~klIi~ 257 (358)
+ |+ +|+... +++ ||.... .+...+.......+ +..+.. ...|++.+++.++.. ++++|++
T Consensus 158 ~~~g~~~~~~~ii~~~---~~y--HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiii 230 (474)
T PLN02624 158 EKKGIPKNEAIIVSCC---GCF--HGRTLA--AISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLF 230 (474)
T ss_pred hhcCCCCCCcEEEEEC---CCc--CCCCHH--HhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 2 33 455543 222 332110 11121110000000 000000 013778898887542 4567888
Q ss_pred cCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-cCC-CC-CCcEEEEcCcCcCcc--CcEEEEEE
Q 018300 258 GASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP-FK-YCDVVTTTTHKSLRG--PRGGMIFF 326 (358)
Q Consensus 258 ~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~~p-l~-gaDiv~~S~hK~L~G--p~GG~I~~ 326 (358)
++.. .|...+ +++|.++|++||+++++|++|. |+...|.. ... .+ ..|++++| |.++| .+.|+++.
T Consensus 231 Epv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~ 307 (474)
T PLN02624 231 EPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLA 307 (474)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeee
Confidence 7544 344444 9999999999999999999997 65333321 111 12 46888764 99865 36678887
Q ss_pred eC
Q 018300 327 KK 328 (358)
Q Consensus 327 ~~ 328 (358)
++
T Consensus 308 ~~ 309 (474)
T PLN02624 308 DK 309 (474)
T ss_pred cH
Confidence 76
No 303
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.72 E-value=3.9e-07 Score=90.05 Aligned_cols=188 Identities=18% Similarity=0.153 Sum_probs=108.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pG 192 (358)
-+|.|.+++.+.+.+-.. .+..| . ++. .++ ..++++++++.+. .++.+|||+|+.+++... ..+|
T Consensus 41 ~~p~v~~ai~~ql~~~~~---~~~~~-~-~~~---~~~-la~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~g 106 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVV---AGPMF-E-HEE---KEE-MLEELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYTG 106 (364)
T ss_pred CCHHHHHHHHHHHHhcCC---ccCCc-C-CHH---HHH-HHHHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHhC
Confidence 468888888776654221 11112 1 232 222 3455777776543 366789999999999865 3345
Q ss_pred -CEEEecCCCCCcccccccccchhccccCCc-----eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CC-
Q 018300 193 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YP- 263 (358)
Q Consensus 193 -D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~- 263 (358)
++|++.+..|.|.-. + .+...+. .+.....++.. ....|.+++++.+.. +++.|++.+.. .|
T Consensus 107 r~~Ii~~~~syHG~t~-~------~ls~~~~~~~~~~~~p~~~~~~~-~~~~d~~~l~~~i~~-~~aAvivEpi~g~gG~ 177 (364)
T PRK04013 107 RKEIIAMTNAFHGRTM-G------ALSATWKPKYREDFEPLVPGFKH-IPFNDVEAAKEAITK-ETAAVIFEPIQGEGGI 177 (364)
T ss_pred CCEEEEECCccccCch-h------hccCCCCcccccCCCCCCCCcEE-ecCCCHHHHHHHhcC-CcEEEEEcCCcCCCCC
Confidence 899988754433211 0 1111110 01111001110 012377888888753 67888876532 12
Q ss_pred CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc-CcEEEEEEeC
Q 018300 264 RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKK 328 (358)
Q Consensus 264 ~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~ 328 (358)
...| ++++.++|+++|+++|.|+.|+ |+ -.|..- .-++ ..|++++ .|.|+| -.-+.++.+.
T Consensus 178 ~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~~~~ 245 (364)
T PRK04013 178 VPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTLTNF 245 (364)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEe--cccccCCceeEEEEecc
Confidence 2445 8999999999999999999987 66 344321 1123 5688877 599854 2345555655
No 304
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.70 E-value=7.4e-07 Score=88.01 Aligned_cols=153 Identities=16% Similarity=0.113 Sum_probs=90.9
Q ss_pred eEEeCCCHHHHHHHHHHh--ccCCCEEEecCCCCCcccccccccchhccccCCce-----EEEEeceecCCCCCCCHHHH
Q 018300 171 NVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDML 243 (358)
Q Consensus 171 ~V~~~SGt~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~iD~d~l 243 (358)
.+++.|||+|+..++... ..++++|++.+..+.|.... .+...+.. +......+. .....|++++
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~dl~~l 158 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFG-------SMSATGQDKIKDGFGDGVPHFS-YAIFNDLNSV 158 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHH-------HHhccCCcccCCCCCCCCCCeE-EeCCCCHHHH
Confidence 356789999999888765 34567888876543332110 11111110 000000000 0013488999
Q ss_pred HHHhhhcCCeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC-CCcEEEEcCcC
Q 018300 244 EKTAILFRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHK 314 (358)
Q Consensus 244 e~~i~~~~~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~-gaDiv~~S~hK 314 (358)
++.+.. ++.+|++.+.+ .|...+ ++++.++|+++|+++++|++|. |+...|.... -.. .-|++ |++|
T Consensus 159 ~~~l~~-~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK 234 (375)
T PRK04260 159 KALVNK-NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAK 234 (375)
T ss_pred HHhcCC-CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--Eecc
Confidence 987753 56777776433 233322 8999999999999999999986 6544442211 111 34655 6789
Q ss_pred cCc-cCcEEEEEEeCCCCchhHHHHHHh
Q 018300 315 SLR-GPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 315 ~L~-Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|+ |.+.|++++++ ++.+.+.
T Consensus 235 ~l~~G~~ig~~~~~~------~~~~~~~ 256 (375)
T PRK04260 235 GLANGVPVGAMLAKS------SLGGAFG 256 (375)
T ss_pred cccCCcceEEEEEcH------HHHhhcC
Confidence 995 55789999886 4555554
No 305
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.69 E-value=6.5e-07 Score=88.06 Aligned_cols=191 Identities=19% Similarity=0.172 Sum_probs=107.2
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---cc
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LK 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al---l~ 190 (358)
-+|.+.+++..-...-+-. +.-|+ ++ ..++ ..+++.++.+ ..+ ..++++||++||.+++..- ..
T Consensus 59 ~hP~iv~al~~Q~~kl~h~---sn~~~--~~---~~~~-la~~L~~~s~-~~d---~vff~NSGaEA~EaAiKlARk~~~ 125 (404)
T COG4992 59 CHPALVEALKEQAEKLWHV---SNLFY--NE---PQAE-LAEKLVELSP-FAD---RVFFCNSGAEANEAALKLARKYTG 125 (404)
T ss_pred CCHHHHHHHHHHHHHhhhc---ccccC--Ch---HHHH-HHHHHHhhCc-ccc---EEEEcCCcHHHHHHHHHHHHHHcC
Confidence 4888888887754433311 11122 12 2333 3455777776 222 2467789999999999654 22
Q ss_pred -C-CCEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCCC---CCCCHHHHHHHhhhcCCeEEEEcCCC--C
Q 018300 191 -P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGASA--Y 262 (358)
Q Consensus 191 -p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~iD~d~le~~i~~~~~klIi~~~s~--~ 262 (358)
| .-+|+.....+.|+ +.+ .++..+.. +.--..|+-+.. ..-|.+++++.+++ ++..|++++-- .
T Consensus 126 ~~~k~~Iia~~nsFHGR-T~g------alS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGEg 197 (404)
T COG4992 126 DPEKSKIIAFENSFHGR-TLG------ALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGEG 197 (404)
T ss_pred CCCCcEEEEEcCCcCCc-cce------eeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhcc-CeEEEEEecccCCC
Confidence 2 23677765433232 111 22333321 111111222211 13488999999986 77788887532 3
Q ss_pred CCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc-CcEEEEEEeC
Q 018300 263 PRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKK 328 (358)
Q Consensus 263 ~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~ 328 (358)
|... -+++++++|++||+++|.|+.|. |+--.|.+. .-.. .-||++. -|.|+| -+-|.++.++
T Consensus 198 GV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~fA~e~~gV~PDI~tl--aK~LgGG~PigA~la~~ 268 (404)
T COG4992 198 GVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLFAYEHYGVEPDILTL--AKALGGGFPIGAMLATE 268 (404)
T ss_pred CCCCCCHHHHHHHHHHHHHhCeEEEEecccc-CCCccchHHHHHHhCCCCCEEEe--eccccCCccceeeEEch
Confidence 3322 27899999999999999999998 664444321 0111 3588754 499965 3445555544
No 306
>PRK12403 putative aminotransferase; Provisional
Probab=98.65 E-value=2e-06 Score=87.65 Aligned_cols=201 Identities=17% Similarity=0.157 Sum_probs=103.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCC-CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc--
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~-G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all-- 189 (358)
.-+|.|.+|+...+.. +..+. .++. .++.. ....++++++++...+ ..++++|||+|+.+++....
T Consensus 70 h~hp~v~~A~~~q~~~-~~~~~---~~~~~~~~~~----~~lae~L~~~~p~~~~---~v~f~~SGseA~e~AiklAr~~ 138 (460)
T PRK12403 70 YGRKDLAAAAARQMEQ-LPYYN---MFFHTTHPAV----IELSELLFSLLPGHYS---HAIYTNSGSEANEVLIRTVRRY 138 (460)
T ss_pred CCCHHHHHHHHHHHHh-CCCee---cccccCCHHH----HHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHH
Confidence 3478899998877653 22111 1222 22322 2244567788764322 24667899999999997652
Q ss_pred -----cCCCEEE-ecCCCCCcccccccccchhccccCCce-----------EEEEeceec--CCCC-------CCCHHHH
Q 018300 190 -----KPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD--ESTG-------LVDYDML 243 (358)
Q Consensus 190 -----~pGD~Vl-~~~~~~ggh~s~~~~~~~~~~~~~g~~-----------~~~~~~~~~--~~~~-------~iD~d~l 243 (358)
++++.++ ...-.| ||+.. ..+...+.. +..++++.. ...+ ..+++++
T Consensus 139 ~~~~g~~~r~~ii~~~~~y-----HG~t~--~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (460)
T PRK12403 139 WQVLGKPQKKIMIGRWNGY-----HGSTL--AATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQL 211 (460)
T ss_pred HHhhCCCCCcEEEEECCCc-----CcccH--hhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 2344444 333222 22211 011122110 111211110 0000 0113556
Q ss_pred HHHhhh---cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEc
Q 018300 244 EKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTT 311 (358)
Q Consensus 244 e~~i~~---~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S 311 (358)
++.+.. .++..|++++- ..|...+ ++++.++|++||+++|+|++|+ |+.-.|.. - .-++ ..|+++
T Consensus 212 e~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~-- 288 (460)
T PRK12403 212 EEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG-GFGRTGEWFAHEHFGFEPDTLS-- 288 (460)
T ss_pred HHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhhhhhcCCCCCeEE--
Confidence 555532 23456777642 2344444 9999999999999999999995 54222321 1 1122 458886
Q ss_pred CcCcCc-c--CcEEEEEEeCCCCchhHHHHHHh
Q 018300 312 THKSLR-G--PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 312 ~hK~L~-G--p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+.|.|+ | |-||++ +++ ++.+.+.
T Consensus 289 ~gK~lggG~~Piga~v-~~~------~i~~~~~ 314 (460)
T PRK12403 289 IAKGLTSGYVPMGGLV-LSK------RIAEALV 314 (460)
T ss_pred EcccccccccceEEEE-ECH------HHHHHHh
Confidence 569986 3 445555 555 5555543
No 307
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.64 E-value=1.2e-06 Score=85.18 Aligned_cols=216 Identities=18% Similarity=0.212 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHhh-hccccc-------ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHc
Q 018300 90 VCEIITKEKERQF-KSLELI-------ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF 161 (358)
Q Consensus 90 ~~~~i~~e~~~~~-~~i~li-------as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lf 161 (358)
+..+.+.-+...+ +.+||- ....+.=+.|.+|-...+....... |.+-+-...+.+.++ +-+|
T Consensus 13 IlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~------Yl~i~G~~~f~~~~~---~llF 83 (396)
T COG1448 13 ILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKN------YLPIEGLPEFLEAVQ---KLLF 83 (396)
T ss_pred hhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccc------cCCcCCcHHHHHHHH---HHhc
Confidence 4466665555444 777775 3444566778887765554443322 333222233443332 3478
Q ss_pred CCCC-----CCCcceEEeCCCHHHHHHHHHHh--ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC
Q 018300 162 NLDE-----NKWGVNVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (358)
Q Consensus 162 g~~~-----~~~~v~V~~~SGt~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~ 234 (358)
|.+. .-+ +.++..+||.|+..+..-+ ..|..+|.+++|..+-|.. ..+..|..++..+| .|.+
T Consensus 84 G~d~~~l~~~Rv-~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~--------If~~aGl~v~~Y~Y-yd~~ 153 (396)
T COG1448 84 GADSPALAEDRV-ATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA--------IFEAAGLEVETYPY-YDAE 153 (396)
T ss_pred CCCcHHHHhhhH-hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH--------HHHhcCCceeeeec-cccc
Confidence 8552 222 4688999999988776544 5677789999998776632 12345665555554 4556
Q ss_pred CCCCCHHHHHHHhhhcCC-eEEEEc-CCCCCCCCC-----HHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC--
Q 018300 235 TGLVDYDMLEKTAILFRP-KLIIAG-ASAYPRDFD-----YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-- 303 (358)
Q Consensus 235 ~~~iD~d~le~~i~~~~~-klIi~~-~s~~~~~~d-----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~-- 303 (358)
+..+|++.+-+.+..... .+|+++ ..++|+-.| |++|.++.++.|.+.+.|.|+ -|+-. |.... .+.
T Consensus 154 ~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AY-QGF~~-GleeDa~~lR~~ 231 (396)
T COG1448 154 TKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY-QGFAD-GLEEDAYALRLF 231 (396)
T ss_pred cccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhh-hhhcc-chHHHHHHHHHH
Confidence 678999988777654333 355554 455665333 788999999999999999994 35432 21100 111
Q ss_pred ---CC-cEEEEcCcCcC--ccCcE-EEEEE
Q 018300 304 ---YC-DVVTTTTHKSL--RGPRG-GMIFF 326 (358)
Q Consensus 304 ---ga-Div~~S~hK~L--~Gp~G-G~I~~ 326 (358)
+- =+++.|++|+| .|-|. ++.+.
T Consensus 232 a~~~~~~lva~S~SKnfgLYgERVGa~~vv 261 (396)
T COG1448 232 AEVGPELLVASSFSKNFGLYGERVGALSVV 261 (396)
T ss_pred HHhCCcEEEEehhhhhhhhhhhccceeEEE
Confidence 22 37889999996 67775 44443
No 308
>PLN00144 acetylornithine transaminase
Probab=98.63 E-value=8.5e-07 Score=88.16 Aligned_cols=199 Identities=18% Similarity=0.123 Sum_probs=109.9
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---c
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al---l 189 (358)
+-+|.|.+++.+.+..-. +.+..+ . ++. +....+++.+..+.+. ..+.+|||+|+..++... .
T Consensus 31 h~~p~v~~ai~~q~~~~~---~~~~~~-~-~~~----~~~la~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~ 96 (382)
T PLN00144 31 HGDPDWVKAVAEQAGTLA---HVSNVY-H-TIP----QVELAKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQ 96 (382)
T ss_pred CCCHHHHHHHHHHHHhcC---Cccccc-c-CHH----HHHHHHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHH
Confidence 347888888887765321 111111 1 221 1223445666655432 356789999999998643 1
Q ss_pred c------C------CCEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCCC---CCCCHHHHHHHhhhcCCe
Q 018300 190 K------P------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPK 253 (358)
Q Consensus 190 ~------p------GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~iD~d~le~~i~~~~~k 253 (358)
. + ..+|+.....|.| +.. ......+.. ++....+..+.. ...|++++++.+...+++
T Consensus 97 ~~~~~~~~~~~~~~r~~ii~~~~~yHG-----~t~--~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a 169 (382)
T PLN00144 97 RVRAPDKKDPAASSATEFVSFSNSFHG-----RTL--GALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTA 169 (382)
T ss_pred hccCCCCccccccccceEEEECCCccc-----ccH--HHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeE
Confidence 1 1 2468877643323 210 011111110 000000000000 023789999887655678
Q ss_pred EEEEcCCCCC--C--CCC--HHHHHHHHHHcCCEEEEeccccccccccCCc-cC-CCC-CCcEEEEcCcCcCc-cCcEEE
Q 018300 254 LIIAGASAYP--R--DFD--YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSLR-GPRGGM 323 (358)
Q Consensus 254 lIi~~~s~~~--~--~~d--l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~~-pl~-gaDiv~~S~hK~L~-Gp~GG~ 323 (358)
+|++.+..++ . ... +++|.++|++||+++|+|++|. |+...|.. +. ..+ ..|++ ++.|.|. |-+.|+
T Consensus 170 avi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PDi~--t~sK~l~~G~pig~ 246 (382)
T PLN00144 170 AVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPDIM--TLAKPLAGGLPIGA 246 (382)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCCEE--EecccccCCcceEE
Confidence 8888754332 1 123 8899999999999999999986 55444432 11 122 45755 5569984 567788
Q ss_pred EEEeCCCCchhHHHHHHh
Q 018300 324 IFFKKDPVLGVELESAIN 341 (358)
Q Consensus 324 I~~~~~~~~~~~~~~~i~ 341 (358)
+++++ ++.+.+.
T Consensus 247 v~~~~------~~~~~~~ 258 (382)
T PLN00144 247 VLVTE------KVASAIN 258 (382)
T ss_pred EEEcH------HHHhccC
Confidence 88876 5655554
No 309
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.63 E-value=3.1e-07 Score=91.79 Aligned_cols=152 Identities=20% Similarity=0.263 Sum_probs=85.0
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHh---ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEe
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~al---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~ 228 (358)
.+..++++.|.+. +|.....| +.+-.+++++. -+++++|+++...|+.+... . .....+..++++.
T Consensus 115 ~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v---~---~t~a~~~g~~iv~ 184 (429)
T PF02347_consen 115 YQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAV---L---RTYAAPLGIEIVE 184 (429)
T ss_dssp HHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHH---H---HHHCCHCCEEEEE
T ss_pred HHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHH---H---HHhhhhCCeEEEE
Confidence 5667899999986 34555544 33333333333 23346999988655544321 0 0012233456666
Q ss_pred ceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCc
Q 018300 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (358)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaD 306 (358)
++.++ ++..| ..++..|++..++ +|...|+++|.+++|++|+++++ .+.-..+ +.+..|-+ |+|
T Consensus 185 ~~~~~-~~~~d---------~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL---~~l~~Pge~GAD 250 (429)
T PF02347_consen 185 VPLDE-DGTTD---------DDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADPNAL---GGLKSPGEYGAD 250 (429)
T ss_dssp E-BBT-TCSB----------STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGCCGC---CTC--GGGGT-S
T ss_pred ecccc-cCCcc---------ccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHH---hCcCChhhcCcc
Confidence 66653 45555 2356667666555 68888999999999999999988 6544332 33445666 999
Q ss_pred EEEEcCcCcC------ccCcEEEEEEeCC
Q 018300 307 VVTTTTHKSL------RGPRGGMIFFKKD 329 (358)
Q Consensus 307 iv~~S~hK~L------~Gp~GG~I~~~~~ 329 (358)
|++++ ||+| +||..|++.++++
T Consensus 251 I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~ 278 (429)
T PF02347_consen 251 IVVGE-HQTFGIPMGFGGPGAGFFAVRED 278 (429)
T ss_dssp EEEEC-CTTTT---CCC-S--EEEEE-GG
T ss_pred EEeeC-CCCCcccCCCCCCCeeeEEEhhh
Confidence 99666 8887 4566699999885
No 310
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.60 E-value=7.2e-07 Score=89.90 Aligned_cols=200 Identities=17% Similarity=0.117 Sum_probs=111.8
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc--c
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--K 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--~ 190 (358)
..+|.|.+++.+.+.+.. . ++...+ .+....+++.+++.- .+ ...+++||++|+..++.... .
T Consensus 66 h~~p~i~~a~~~~~~~~~--~-----~~~~~~----~~~~la~~L~~~~~~-~~---~v~~~~sGseA~e~Aik~a~~~~ 130 (426)
T PRK00062 66 HAHPEVVEAVIEAAEKGL--S-----FGAPTE----LEVELAELVIELVPS-IE---MVRMVNSGTEATMSAIRLARGYT 130 (426)
T ss_pred CCCHHHHHHHHHHHHhCC--c-----CCCCCH----HHHHHHHHHHHhCCC-CC---EEEEecCHHHHHHHHHHHHHHHh
Confidence 468889988887775421 1 111122 222345566666631 21 23567899999999998753 3
Q ss_pred CCCEEEecCCCCCcccccccccc--hhcc----ccCCceEEEE---eceecCCCCCCCHHHHHHHhhh--cCCeEEEEcC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTP--KRRV----SGTSIYFESM---PYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGA 259 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~--~~~~----~~~g~~~~~~---~~~~~~~~~~iD~d~le~~i~~--~~~klIi~~~ 259 (358)
.+++|+..+..|.|+.. +.... .... ...+...... .+.+ ...|++++++.+.. .++.+|++++
T Consensus 131 g~~~ii~~~~~yHG~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~l~~~i~~~~~~~aaiivEp 205 (426)
T PRK00062 131 GRDKIIKFEGCYHGHAD-SLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA----PYNDLEAVEELFEEYGDEIAAVIVEP 205 (426)
T ss_pred CCCeEEEEcCccCCchh-hhhhccCccccccCCCCCCCCCcccccceEEc----CCCCHHHHHHHHHhCCCcEEEEEEeC
Confidence 36788888765544310 00000 0000 0000000000 0001 12478899887753 2456777763
Q ss_pred --CCCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-cCCCC-CCcEEEEcCcCcCc-cCcEEEEEEeCCC
Q 018300 260 --SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDP 330 (358)
Q Consensus 260 --s~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~~ 330 (358)
++.|...+ +++|.++|++||+++++|++|. |+..++.. ...++ ..|++ ++.|.|+ |.+.|++++++
T Consensus 206 v~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi~--~~gK~l~~G~p~ga~~~~~-- 280 (426)
T PRK00062 206 VAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDLT--TLGKIIGGGLPVGAFGGRR-- 280 (426)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcchH--hhhhHhhCCCcceeeeEHH--
Confidence 33455555 8999999999999999999997 66332211 11122 24654 5679985 44567777776
Q ss_pred CchhHHHHHHh
Q 018300 331 VLGVELESAIN 341 (358)
Q Consensus 331 ~~~~~~~~~i~ 341 (358)
++.+.++
T Consensus 281 ----~i~~~~~ 287 (426)
T PRK00062 281 ----EIMEQLA 287 (426)
T ss_pred ----HHHHhhc
Confidence 5666664
No 311
>PRK07046 aminotransferase; Validated
Probab=98.59 E-value=3.1e-06 Score=86.04 Aligned_cols=197 Identities=15% Similarity=0.089 Sum_probs=111.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.|.+++.+.+......+. .++ .+....+++.++++.+. ..+++|||+|+..++... ...
T Consensus 92 ~~p~i~~Av~~q~~~~~~~~~-------~~~----~~~~lAe~l~~~~~~~~-----v~F~nSGtEA~e~AlrlAR~~TG 155 (453)
T PRK07046 92 SPAPVARALAEQARRGLTTML-------PSE----DAAWVGEELARRFGLPY-----WQVATTATDANRFVLRWARAVTG 155 (453)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------CCH----HHHHHHHHHHHHhCCCE-----EEEECCHHHHHHHHHHHHHHhhC
Confidence 478899888877654322111 122 33335566777776443 356789999999998654 334
Q ss_pred CCEEEecCCCCCccccccccc--chhc---cccCCceE----EEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC--
Q 018300 192 HDRIMGLDLPHGGHLSHGFMT--PKRR---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-- 260 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~--~~~~---~~~~g~~~----~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s-- 260 (358)
.++|+...-.|.|+....... .... ....+... ....++ .-|++.+++.+...+...|++++-
T Consensus 156 r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~vAavi~EPi~g 229 (453)
T PRK07046 156 RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------FNDLAALEAALADGDVAAVLAEPAMT 229 (453)
T ss_pred CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------CCCHHHHHHHhCCCCeEEEEECCCCC
Confidence 567887764333321000000 0000 00001000 001111 237899998885445667787653
Q ss_pred CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCc-cCcEEEEEEeCCCCchh
Q 018300 261 AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGV 334 (358)
Q Consensus 261 ~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~~~~ 334 (358)
+.|...+ +++++++|+|+|+++|.|+.+.++.-.++ ...-++ ..|++++ -|.|+ |...|.+++++
T Consensus 230 ~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg-~~~~~gv~PDi~t~--gK~lggG~Pi~av~g~~------ 300 (453)
T PRK07046 230 NIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGG-YTRAHGLEPDFLVV--GKPIAGGVPCAVYGFSA------ 300 (453)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcc-hhHHhCCCccceee--hhhhcCCCcceeeeehH------
Confidence 2232222 89999999999999999999873321122 111123 4688865 69985 44567777777
Q ss_pred HHHHHHh
Q 018300 335 ELESAIN 341 (358)
Q Consensus 335 ~~~~~i~ 341 (358)
++.+.+.
T Consensus 301 ~i~~~~~ 307 (453)
T PRK07046 301 ELAERAQ 307 (453)
T ss_pred HHHHHHh
Confidence 5666665
No 312
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.56 E-value=1.9e-06 Score=86.47 Aligned_cols=194 Identities=15% Similarity=0.110 Sum_probs=100.8
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
+-+|.|.+++.+.+.+-. +.+..+ .++. .....+++.+++.... ...+.+||++|+..++....
T Consensus 56 h~~p~v~~ai~~q~~~~~---~~~~~~--~~~~----~~~la~~L~~~~~~~~----~v~f~~sGseA~e~AlklAr~~~ 122 (408)
T PRK04612 56 HNDPDLVAALTEQAGKLW---HTSNVF--YSAP----PLKLAEELVTASRFAE----KVFLCNSGTEANEAAIKLVRKWA 122 (408)
T ss_pred CCCHHHHHHHHHHHHhcc---cccccc--CCHH----HHHHHHHHHhhCCCCC----EEEEcCchHHHHHHHHHHHHHHH
Confidence 347778888776654321 111111 1221 1123445566653222 24567899999999986431
Q ss_pred ---c--C-CCEEEecCCCCCcccccccccchhccccCCce-----EEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 190 ---K--P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 190 ---~--p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
. + .++|+.....| ||.... .+...+.. +...+.++. .-...|.+.+++.+...++.+|++.
T Consensus 123 ~~~g~~~~r~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~aavi~e 194 (408)
T PRK04612 123 SSQGRPADKRVIVTFRGSF-----HGRTLA--AVTATAQPKYQEGYEPLPGGFR-YVDFNDVEALEAAMAGGDVAAVMLE 194 (408)
T ss_pred HhhCCCCCCcEEEEECCCc-----CCccHH--HHHhcCCcccccCCCCCCCCce-EcCCCCHHHHHHhhCCCCEEEEEEC
Confidence 1 2 23688766433 332110 11111110 110000000 0012478889888754456677776
Q ss_pred CCC-CC-C-CC---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCc-cCcEEEEEEeC
Q 018300 259 ASA-YP-R-DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKK 328 (358)
Q Consensus 259 ~s~-~~-~-~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~ 328 (358)
+.. .+ . .. -+++|.++|+++|+++|+|++|. |+...|....-.. +....+.++.|.|+ |.+-|++++++
T Consensus 195 P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~ 271 (408)
T PRK04612 195 PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGP 271 (408)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECH
Confidence 533 22 2 22 28999999999999999999987 5543342111011 23333345579984 44567777765
No 313
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.54 E-value=5.1e-06 Score=84.03 Aligned_cols=201 Identities=14% Similarity=0.107 Sum_probs=108.7
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
+-+|.|.+++.+.+.+....+ + .++ ...+ ..+++.+++..... ...+.+||++|+..++... ..
T Consensus 69 h~~p~v~~ai~~q~~~~~~~~------~-~~~---~~~~-la~~L~~~~~~~~~---~v~f~~SGsEA~e~AiklAr~~t 134 (433)
T PRK00615 69 HSHPKICDAIQQGAERGTSYG------L-TSE---QEIL-FAEELFSYLGLEDH---KIRFVSSGTEATMTAVRLARGIT 134 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCC------C-CCH---HHHH-HHHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHhh
Confidence 347888888877665422111 1 122 1222 34556777754321 2456789999999998754 22
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEE--Eec---eecCCC---CCCCHHHHHHHhhhc--CCeEEEEcCC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES--MPY---RLDEST---GLVDYDMLEKTAILF--RPKLIIAGAS 260 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~--~~~---~~~~~~---~~iD~d~le~~i~~~--~~klIi~~~s 260 (358)
...+|+...-.|.|+-.... ..+...+..... ..+ +..+.. ..-|++++++.+... +..+|++++-
T Consensus 135 gr~~ii~~~~~yHG~td~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv 210 (433)
T PRK00615 135 GRSIIIKFLGCYHGHADTLL----QGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPI 210 (433)
T ss_pred CCCEEEEEcCccCCCCcccC----cccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCC
Confidence 33567776543333210000 011111100000 000 000000 123788888887543 3456777642
Q ss_pred --CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc--cCCCC-CCcEEEEcCcCcCc-cCcEEEEEEeCCC
Q 018300 261 --AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDP 330 (358)
Q Consensus 261 --~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~--~~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~~ 330 (358)
+.|...+ +++|.++|++||+++|+|++|. |+. .|.. ..-++ ..|+++ +.|.|+ |-.+|++++++
T Consensus 211 ~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R-~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~-- 284 (433)
T PRK00615 211 CANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFR-VAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHK-- 284 (433)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-ccc-ccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecH--
Confidence 2333333 6799999999999999999995 762 2221 11122 468876 579996 44588888887
Q ss_pred CchhHHHHHHh
Q 018300 331 VLGVELESAIN 341 (358)
Q Consensus 331 ~~~~~~~~~i~ 341 (358)
++.+.+.
T Consensus 285 ----~i~~~~~ 291 (433)
T PRK00615 285 ----SIMDHLA 291 (433)
T ss_pred ----HHHhhhc
Confidence 5666553
No 314
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.52 E-value=4.9e-06 Score=83.78 Aligned_cols=204 Identities=15% Similarity=0.000 Sum_probs=107.3
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.+.+++...+.+.. +..... .+++ ...+ ..+++.+..+.+..+ ..++.+||++|+..++... ...
T Consensus 58 ~~~~i~~a~~~~~~~~~---~~~~~~-~~~~---~~~~-la~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~ 127 (425)
T PRK08088 58 LHPKVVAAVEAQLKKLS---HTCFQV-LAYE---PYLE-LCEKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (425)
T ss_pred CCHHHHHHHHHHHhhCC---Cccccc-cCCH---HHHH-HHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhC
Confidence 48888888877765321 111000 1122 1222 344566666643211 3467889999988887654 223
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCc-------------eEEEEeceecCCCCCC--CHHHHHHHhh----hcCC
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDESTGLV--DYDMLEKTAI----LFRP 252 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~i--D~d~le~~i~----~~~~ 252 (358)
..+|+..+..|.|... + .....+. .+...+++.+...... +++++++.+. ..+.
T Consensus 128 r~~iv~~~~~yHG~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 200 (425)
T PRK08088 128 RSGVIAFTGAYHGRTH-Y------TLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDI 200 (425)
T ss_pred CCeEEEECCccCCccH-H------HHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCce
Confidence 3456665544333211 0 0011110 0111222222111011 1456787765 1345
Q ss_pred eEEEEcCCC-C-CCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcC-ccCcEEE
Q 018300 253 KLIIAGASA-Y-PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGM 323 (358)
Q Consensus 253 klIi~~~s~-~-~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L-~Gp~GG~ 323 (358)
.+|++++.. + +.... +++|.++|+++|+++|+|.+|. |+...+.. ..++ +.+.-+.|+.|.| +|.+.|+
T Consensus 201 aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~-~~~~~~~~~pdi~s~sK~l~~G~rig~ 278 (425)
T PRK08088 201 AAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTL-FAMEQMGVAADLTTFAKSIAGGFPLAG 278 (425)
T ss_pred EEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcch-hHHhhcCCCCCEEEEeccccCCCccee
Confidence 677776432 2 22222 8899999999999999999987 54333321 1121 3222246778998 4567799
Q ss_pred EEEeCCCCchhHHHHHHhh
Q 018300 324 IFFKKDPVLGVELESAINN 342 (358)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~ 342 (358)
+++++ ++.+.+..
T Consensus 279 v~~~~------~~~~~~~~ 291 (425)
T PRK08088 279 VTGRA------EVMDAIAP 291 (425)
T ss_pred eEecH------HHHhhcCC
Confidence 99876 56665544
No 315
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.51 E-value=2.5e-06 Score=85.85 Aligned_cols=200 Identities=19% Similarity=0.129 Sum_probs=107.2
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
-+|.|.+++.+.+..-. ..... . + .++ .+....+++.+++....+ ...+.+||++|+..++....
T Consensus 59 ~~p~v~~ai~~q~~~~~-~~~~~-~-~-~~~----~~~~la~~l~~~~p~~~~---~v~f~~sGseA~e~A~klar~~~~ 127 (423)
T PRK05964 59 NHPYIDQAIREQLDRLD-HVIFA-G-F-THE----PAERLAQRLVALTPGGLD---HVFFSDSGSVAVEVALKMALQYWR 127 (423)
T ss_pred CCHHHHHHHHHHHhhCC-Ccccc-c-c-CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 47888888877664321 10000 0 1 122 222245567777642221 23567899999999987531
Q ss_pred ---cCC-CEEEecCCCCCcccccccccchhccccCCc------------eEEEEeceecCCCCCCCHHHHHHHhhhc--C
Q 018300 190 ---KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTGLVDYDMLEKTAILF--R 251 (358)
Q Consensus 190 ---~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~~iD~d~le~~i~~~--~ 251 (358)
++| .+|+.....|.|.- .+ .+...+. .+..++++.+ +....+++++++.+... +
T Consensus 128 ~~~~~~r~~ii~~~~~yHG~t-~~------~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~ 199 (423)
T PRK05964 128 NRGEPGRSRFLSLRGGYHGDT-IG------TMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGE 199 (423)
T ss_pred hcCCCCCcEEEEEcCCcCCcc-HH------HHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCc
Confidence 133 47887764433321 01 1111110 0122232211 00112377888877532 3
Q ss_pred CeEEEEcC--CC-CCCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCccC--
Q 018300 252 PKLIIAGA--SA-YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP-- 319 (358)
Q Consensus 252 ~klIi~~~--s~-~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~Gp-- 319 (358)
...|++++ .. .|... .+++|.++|++||+++|+|++|. |+...|.. . ...+ ..|+++++ |+|.|.
T Consensus 200 iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~~a~~~~~v~pDi~~~~--K~l~gG~~ 276 (423)
T PRK05964 200 IAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT-GFGRTGTLFACEQAGVSPDIMCLS--KGLTGGYL 276 (423)
T ss_pred EEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhHHHhcCCCCCeeeee--hhhhcCcc
Confidence 45677764 12 23322 38999999999999999999995 55333321 1 1122 46777654 999653
Q ss_pred cEEEEEEeCCCCchhHHHHHHh
Q 018300 320 RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 320 ~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+.|++++++ ++.+.+.
T Consensus 277 p~~av~~~~------~i~~~~~ 292 (423)
T PRK05964 277 PLAATLCTA------EIFEAFY 292 (423)
T ss_pred cceEEEEcH------HHHHhhh
Confidence 457777776 5666654
No 316
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.50 E-value=4.7e-06 Score=85.81 Aligned_cols=203 Identities=15% Similarity=0.079 Sum_probs=105.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCCCHHHHHHHHHHhc--
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTAIL-- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg-~~~~~~~v~V~~~SGt~A~~~a~~all-- 189 (358)
.-+|.|.+|+.+.+.. ....... +...++ .+....+++.+++. .+.+ ...+++||++|+.+++....
T Consensus 105 h~hp~v~~Av~~ql~~-~~~~~~~--~~~~~~----~~~~lae~L~~~~~~~~~~---~v~f~~SGsEA~e~AlKlAr~~ 174 (504)
T PLN02760 105 GSEPRLVAAATEQLNK-LPFYHSF--WNRTTK----PSLDLAKELLEMFTARKMG---KVFFTNSGSEANDTQVKLVWYY 174 (504)
T ss_pred CCCHHHHHHHHHHHhh-ccceecc--cccCcH----HHHHHHHHHHhhcCCCCCC---EEEEeCChHHHHHHHHHHHHHH
Confidence 3489999999887653 2111110 011222 22223455666653 3322 23567899999999997652
Q ss_pred -----cCC-CEEEecCCCCCcccccccccchhccccCCce------------EEEEeceec-----CCCC-----CCCHH
Q 018300 190 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY------------FESMPYRLD-----ESTG-----LVDYD 241 (358)
Q Consensus 190 -----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~------------~~~~~~~~~-----~~~~-----~iD~d 241 (358)
.+| ++|+..+-.|.|.. .+ .+.+.+.. +...+++.. +... ...++
T Consensus 175 ~~~~g~~~r~~iI~~~~~yHG~t-~~------a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 247 (504)
T PLN02760 175 NNALGRPNKKKFIARSKSYHGST-LI------SASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAD 247 (504)
T ss_pred HHhcCCCCCcEEEEECCCccCCh-Hh------hhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHH
Confidence 133 57777764333321 00 11122210 111111100 0000 01124
Q ss_pred HHHHHhhh---cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEecccc-ccccccCCccCCCC-CCcEEEE
Q 018300 242 MLEKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTT 310 (358)
Q Consensus 242 ~le~~i~~---~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~-~Gl~~~g~~~~pl~-gaDiv~~ 310 (358)
++++.+.. .++..|++++- ..|...+ +++|+++|++||+++|+|++|. +|-.+...-..-++ ..|++++
T Consensus 248 ~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtl 327 (504)
T PLN02760 248 NLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSL 327 (504)
T ss_pred HHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEe
Confidence 56666532 23456777642 2344455 9999999999999999999994 54433211001122 4687765
Q ss_pred cCcCcCcc---CcEEEEEEeCCCCchhHHHHHHh
Q 018300 311 TTHKSLRG---PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 311 S~hK~L~G---p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|.|+| |-|+ +++++ ++.+.+.
T Consensus 328 --gK~lggG~~PigA-v~~~~------~i~d~~~ 352 (504)
T PLN02760 328 --AKALSSAYMPIGA-VLVSP------EISDVIH 352 (504)
T ss_pred --cccccCCccccce-EeecH------HHHhhhh
Confidence 599965 5445 66665 5666554
No 317
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.48 E-value=5e-06 Score=90.30 Aligned_cols=151 Identities=17% Similarity=0.150 Sum_probs=95.7
Q ss_pred HHHHHHHHcCCCCCCCcceEEeC-CCHHHHHHHHHHh-c--cCCCEEEecCCCCCcccccccccchhccccCCceEEEEe
Q 018300 153 CQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-L--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~-SGt~A~~~a~~al-l--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~ 228 (358)
.+..++++.|.+.. |.... .+|.+..+++++. . +++++|++++..|..+... .. ..+...|. +++.
T Consensus 114 ~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v---~~-t~a~~~g~--~v~~ 183 (939)
T TIGR00461 114 FQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSV---LH-TRAKPFGI--EVIV 183 (939)
T ss_pred HHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHH---HH-HHHHhcCc--EEEE
Confidence 56779999999863 33333 4455555555554 2 3458999988655432211 00 01223343 4333
Q ss_pred ceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCc
Q 018300 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (358)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaD 306 (358)
+|+++|++.+ ++..+++..++ +|...|+++|.+++|++|++++++.-..+. ..+..|-+ |+|
T Consensus 184 ---------~~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al----~ll~~Pge~GaD 247 (939)
T TIGR00461 184 ---------VDCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL----TLLTPPGHYGAD 247 (939)
T ss_pred ---------EcHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh----CCcCCHHHcCCc
Confidence 2455666554 34456665555 677789999999999999999997644322 22334555 999
Q ss_pred EEEEcCcCc-----CccCcEEEEEEeCC
Q 018300 307 VVTTTTHKS-----LRGPRGGMIFFKKD 329 (358)
Q Consensus 307 iv~~S~hK~-----L~Gp~GG~I~~~~~ 329 (358)
|++++.+++ ++||..|++.++++
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~ 275 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDE 275 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHh
Confidence 998887776 35888899999884
No 318
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.48 E-value=1e-05 Score=76.45 Aligned_cols=212 Identities=17% Similarity=0.183 Sum_probs=117.9
Q ss_pred hcccccccCCC-CcHHHHHHHhhhhhcccCCCCCCC--cCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH
Q 018300 103 KSLELIASENF-TSRAVMEAVGSCLTNKYSEGLPGK--RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (358)
Q Consensus 103 ~~i~lias~n~-~s~~V~~al~~~l~~~~~~G~pg~--r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~ 179 (358)
.+..|..+-|+ .-|++.+........--++|.-+. -.|.|.+-.+.+-+.....+.+.+|-+-.+ -|+..++||+
T Consensus 30 ~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQ 107 (417)
T COG3977 30 PGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQ 107 (417)
T ss_pred CCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCcc
Confidence 44555555554 356666555444333323331110 123333333344444455567777776432 3788899997
Q ss_pred -HHHHHHHHh---ccCCC--EEEe-cCCCCCcccccccccchhccccCCceEEEEe-ceecCCC---CCCCHHHHHHHhh
Q 018300 180 -ANFEVYTAI---LKPHD--RIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESMP-YRLDEST---GLVDYDMLEKTAI 248 (358)
Q Consensus 180 -A~~~a~~al---l~pGD--~Vl~-~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~-~~~~~~~---~~iD~d~le~~i~ 248 (358)
|.+-++.-+ ...|+ +|+. +.|+|-|+-..+. .-...+...| +++.+.. ..+|+++|.-.
T Consensus 108 s~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l--------~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~-- 177 (417)
T COG3977 108 SAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGL--------EEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG-- 177 (417)
T ss_pred chHHHHHHHhcCccCCCcceeEeeccChhhcccccccc--------CccceeeccCCcccccccceeeccCHHHcccc--
Confidence 666665544 33455 3544 3566666532111 0011111111 2222221 26888887642
Q ss_pred hcCCeEEEEcCCCCCC-----CCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC---C-CcEEEEcCcCc-Ccc
Q 018300 249 LFRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---Y-CDVVTTTTHKS-LRG 318 (358)
Q Consensus 249 ~~~~klIi~~~s~~~~-----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~---g-aDiv~~S~hK~-L~G 318 (358)
..+.+|.++-+.+|+ ..++.+|.++|++||++++.|.|+..-+ .+...+... + --+.++|++|. |+|
T Consensus 178 -e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PF--P~iifsd~~~~w~~NiilC~SLSK~GLPG 254 (417)
T COG3977 178 -ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPF--PGIIFSDATPLWNENIILCMSLSKLGLPG 254 (417)
T ss_pred -cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCC--CceecccccccCCCCEEEEeehhhcCCCC
Confidence 367788887776653 3347889999999999999999875322 221111111 2 23779999996 677
Q ss_pred CcEEEEEEeCC
Q 018300 319 PRGGMIFFKKD 329 (358)
Q Consensus 319 p~GG~I~~~~~ 329 (358)
-|-|+++.+++
T Consensus 255 ~R~GIiIane~ 265 (417)
T COG3977 255 SRCGIIIANEK 265 (417)
T ss_pred cceeEEEccHH
Confidence 78899999874
No 319
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.47 E-value=1.6e-05 Score=81.27 Aligned_cols=198 Identities=17% Similarity=0.119 Sum_probs=105.8
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.|.+++...+......+ ..++ .+.+..+++.+.+..-. ...+.+|||+|+..++... ...
T Consensus 116 ~~p~v~~av~~ql~~~~~~~-------~~~~----~~~~lAe~l~~~~p~~~----~v~f~~SGsEA~e~AlklAR~~tg 180 (474)
T PLN02482 116 ADDEVLAALAETMKKGTSFG-------APCL----LENVLAEMVIDAVPSVE----MVRFVNSGTEACMGVLRLARAYTG 180 (474)
T ss_pred CCHHHHHHHHHHHhhCCCCC-------CCCH----HHHHHHHHHHHhCCCCC----EEEEeCChHHHHHHHHHHHHHhcC
Confidence 37899999988775432111 1122 23334556677664211 2356789999999998654 223
Q ss_pred CCEEEecCCCCCcccc-cccccc--hhcc--c-cCCceE----EEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcC
Q 018300 192 HDRIMGLDLPHGGHLS-HGFMTP--KRRV--S-GTSIYF----ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA 259 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s-~~~~~~--~~~~--~-~~g~~~----~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~ 259 (358)
.++|+...-.|.|+-. ...... .... . ..+... ....++ .-|++++++.+..+ +...|++++
T Consensus 181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~~~iAavI~Ep 254 (474)
T PLN02482 181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP------YNDLEAVKKLFEANKGEIAAVILEP 254 (474)
T ss_pred CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec------CCChHHHHHHHHhCCCceEEEEECC
Confidence 4678776543333210 000000 0000 0 000000 001111 12788999887643 345677764
Q ss_pred C--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-cCCCC-CCcEEEEcCcCcCcc-CcEEEEEEeCCC
Q 018300 260 S--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDP 330 (358)
Q Consensus 260 s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~~~ 330 (358)
. +.|...+ ++++.++|++||+++|+|++|. |+..+... ..-++ ..|++++ .|.|+| ..-|.+++++
T Consensus 255 v~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~-- 329 (474)
T PLN02482 255 VVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIAYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRR-- 329 (474)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecCcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcH--
Confidence 2 2233333 6789999999999999999995 76322111 11122 4688655 699965 2334457766
Q ss_pred CchhHHHHHHh
Q 018300 331 VLGVELESAIN 341 (358)
Q Consensus 331 ~~~~~~~~~i~ 341 (358)
++.+.+.
T Consensus 330 ----ei~~~~~ 336 (474)
T PLN02482 330 ----EIMEMVA 336 (474)
T ss_pred ----HHHHhhc
Confidence 5666554
No 320
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.47 E-value=8.3e-06 Score=82.70 Aligned_cols=200 Identities=18% Similarity=0.096 Sum_probs=106.9
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---c
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al---l 189 (358)
.-+|.|.+|+...+..-. +. .+++. ++ ......+++++++....+ ...+++|||+|+..++... .
T Consensus 91 h~hp~v~~Av~~ql~~l~---~~-~~~~~-~~----~~~~lAe~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t 158 (442)
T TIGR03372 91 HRNPNVIAAVENQLAKQP---LH-SQELL-DP----LRALLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQ 158 (442)
T ss_pred CCCHHHHHHHHHHHHhCC---Cc-ccccC-CH----HHHHHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHH
Confidence 348889999887665321 11 12221 22 222345567777654322 2456789999999998643 1
Q ss_pred --cCCCEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCCC---CCCCHHHHHHHhhh-----cCCeEEEEc
Q 018300 190 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAG 258 (358)
Q Consensus 190 --~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~iD~d~le~~i~~-----~~~klIi~~ 258 (358)
+...+|++....|.|. .. ..+..++.. ++....+..+.. ...|.+++++.++. .+...|+++
T Consensus 159 ~~~gr~~ii~~~~~yHG~-----t~--~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvE 231 (442)
T TIGR03372 159 SPRGKFTFIAASGAFHGK-----SL--GALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILE 231 (442)
T ss_pred hhcCCcEEEEECCCccCC-----CH--HHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 1235788776433332 10 011222210 000000011000 12366777766642 234566765
Q ss_pred CC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCccC--cEEEEEEe
Q 018300 259 AS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRGP--RGGMIFFK 327 (358)
Q Consensus 259 ~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~Gp--~GG~I~~~ 327 (358)
+- ..|...+ ++++.++|+++|+++|+|++|. |+.-.|... .-++ ..|+++ +.|.|+|- ..|.++++
T Consensus 232 pv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~ 308 (442)
T TIGR03372 232 PIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGATIAT 308 (442)
T ss_pred CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeee--ehhhhcCCcccceEEEec
Confidence 42 2344455 8999999999999999999995 543233221 1122 468886 56999642 34555566
Q ss_pred CCCCchhHHHHHH
Q 018300 328 KDPVLGVELESAI 340 (358)
Q Consensus 328 ~~~~~~~~~~~~i 340 (358)
+ ++.+.+
T Consensus 309 ~------~i~~~~ 315 (442)
T TIGR03372 309 E------AVFSVL 315 (442)
T ss_pred H------HHHHhh
Confidence 5 555555
No 321
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.46 E-value=1.2e-05 Score=81.46 Aligned_cols=202 Identities=17% Similarity=0.087 Sum_probs=107.9
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
.-+|.|.+|+...+.... +....++ .++ .+....+++.+++....+ ...+++|||+|+..++... ..
T Consensus 57 h~~p~v~~Ai~~ql~~~~---~~~~~~~-~~~----~~~~la~~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~t 125 (443)
T PRK08360 57 HNNPRVVKAIKEQTDKLI---HYTPIYG-FPV----EPLLLAEKLIEIAPGDNP---KVSFGLSGSDANDGAIKFARAYT 125 (443)
T ss_pred CCCHHHHHHHHHHHHhcc---Ccccccc-CcH----HHHHHHHHHHHhCCCCCC---EEEEcCCHHHHHHHHHHHHHHhc
Confidence 348888888877765421 1111111 122 122244557777754422 2356679999999998653 22
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCC------------ceEEEEeceecCC--CC-------CCCHHHHHHHhhh
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDES--TG-------LVDYDMLEKTAIL 249 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~~~~~~~~~--~~-------~iD~d~le~~i~~ 249 (358)
...+|+.....|.|.- .+ .....+ ..+..++++-... .. ..+.+.+++.++.
T Consensus 126 gr~~ii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (443)
T PRK08360 126 KRRKILSYLRSYYGST-YG------AMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEG 198 (443)
T ss_pred CCCeEEEEeCCcCCcC-HH------HHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHh
Confidence 3456776553332210 00 011111 0112222221000 00 0223456666542
Q ss_pred ----cCCeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcC
Q 018300 250 ----FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL 316 (358)
Q Consensus 250 ----~~~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L 316 (358)
.+++.|++++.. .|...+ +++|.++|+++|+++|+|++|. |+...|... ..++ ..|++++ .|.|
T Consensus 199 ~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDiitl--sK~l 275 (443)
T PRK08360 199 EVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIITL--GKPL 275 (443)
T ss_pred ccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEEEe--cccc
Confidence 356788887532 232222 8999999999999999999987 543334321 1122 4577754 7998
Q ss_pred c-cCcEEEEEEeCCCCchhHHHHHHh
Q 018300 317 R-GPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 317 ~-Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+ |.+.|++++++ ++.+.+.
T Consensus 276 ~~G~pigav~~~~------~i~~~~~ 295 (443)
T PRK08360 276 GGGLPISATIGRA------EIMDSLP 295 (443)
T ss_pred cCCceeEEEEEcH------HHHhhhc
Confidence 4 55778888876 5666554
No 322
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.45 E-value=7.8e-06 Score=82.96 Aligned_cols=202 Identities=19% Similarity=0.093 Sum_probs=104.4
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.|.+++...+..-. +....++ .++ .+..+.+++++++.....+ ...+.+||++|+..++... ...
T Consensus 59 ~~p~v~~Ai~~ql~~~~---~~~~~~~-~~~----~~~~lae~L~~~~p~~~~~--~v~f~~SGseA~e~AiklAr~~tg 128 (445)
T PRK08593 59 APPRVVEAIKAQADKFI---HYTPAYM-YHE----PLVRLAKKLCELAPGDFEK--RVTFGLSGSDANDGIIKFARAYTG 128 (445)
T ss_pred CCHHHHHHHHHHHHhcc---Ccccccc-CCH----HHHHHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhC
Confidence 47888888877664321 1111111 122 2222455677777533111 2345689999999998743 222
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCc-------------eEEEEeceecCC--CCCCC-------HHHHHHHhhh
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDES--TGLVD-------YDMLEKTAIL 249 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~~iD-------~d~le~~i~~ 249 (358)
..+|+..+-.|.|.- .+ .+...+. .+..++++-... ....+ ++++++.+..
T Consensus 129 r~~ii~~~~~YHG~t-~~------als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
T PRK08593 129 RPYIISFTNAYHGST-YG------SLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEK 201 (445)
T ss_pred CCeEEEECCCcCCCc-HH------HHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHh
Confidence 346777654333321 00 1111110 012222211000 00111 2445544432
Q ss_pred ----cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcC
Q 018300 250 ----FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL 316 (358)
Q Consensus 250 ----~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L 316 (358)
.+...|++++- +.|...+ +++|.++|++||+++|+|++|. |+...|... .-++ ..|+++ +.|.+
T Consensus 202 ~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~t--~gK~l 278 (445)
T PRK08593 202 YLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLMS--FGKSL 278 (445)
T ss_pred hcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEee--ecccc
Confidence 24567777653 2233333 8999999999999999999985 432223211 1122 357774 56998
Q ss_pred c-cCcEEEEEEeCCCCchhHHHHHHh
Q 018300 317 R-GPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 317 ~-Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+ |.+.|++++++ ++.+.++
T Consensus 279 ~~G~p~gav~~~~------~i~~~~~ 298 (445)
T PRK08593 279 AGGMPMSAIVGRK------EIMESLE 298 (445)
T ss_pred cCCcccEEEEEcH------HHHhhhc
Confidence 6 45678888887 5666554
No 323
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.44 E-value=1e-05 Score=82.47 Aligned_cols=192 Identities=17% Similarity=0.115 Sum_probs=101.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---c-
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al---l- 189 (358)
-+|.|.+|+.+.+..-. +. .+++. ++ ......+++++++....+ ...+.+|||+|+..++... .
T Consensus 99 ~~p~v~~Ai~~ql~~l~---~~-~~~~~-~~----~~~~lae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~t~ 166 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQP---LH-SQELL-DP----LRAMLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQS 166 (459)
T ss_pred CCHHHHHHHHHHHhhCc---cc-ccccC-CH----HHHHHHHHHHHhCCCCCC---EEEEeCCchHHHHHHHHHHHHHhc
Confidence 47899999887765321 11 11221 22 222244556777643322 2456779999999998743 2
Q ss_pred cCC-CEEEecCCCCCcccccccccchhccccCCce-EEEEeceecCCCC---CCCHHHHHHHhhh-----cCCeEEEEcC
Q 018300 190 KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTG---LVDYDMLEKTAIL-----FRPKLIIAGA 259 (358)
Q Consensus 190 ~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~---~iD~d~le~~i~~-----~~~klIi~~~ 259 (358)
++| .+|+...-.| ||+.. ..+...+.. +..-..+..+... ..|.+++++.++. .++..|++++
T Consensus 167 ~~gr~~ii~~~~~y-----HG~t~--~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEp 239 (459)
T PRK11522 167 PRGKFTFIATSGAF-----HGKSL--GALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEP 239 (459)
T ss_pred cCCCcEEEEecCCC-----CCCcH--HHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEec
Confidence 123 3677765333 33210 011222210 0100001111111 2377888887753 1334666654
Q ss_pred C--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCcc---CcEEEEEEe
Q 018300 260 S--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG---PRGGMIFFK 327 (358)
Q Consensus 260 s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~G---p~GG~I~~~ 327 (358)
- ..|...+ ++++.++|++||+++|+|++|. |+.-.|.. - .-++ ..|++++ .|.|+| |-|+++ ++
T Consensus 240 v~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~--gK~lggG~~Pigav~-~~ 315 (459)
T PRK11522 240 IQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDILCL--AKALGGGVMPIGATI-AT 315 (459)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEEEe--chhhhCCCccceeEE-Ec
Confidence 2 2344444 8999999999999999999996 65223321 1 1122 4588754 699965 445555 44
Q ss_pred C
Q 018300 328 K 328 (358)
Q Consensus 328 ~ 328 (358)
+
T Consensus 316 ~ 316 (459)
T PRK11522 316 E 316 (459)
T ss_pred H
Confidence 4
No 324
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.44 E-value=1.3e-05 Score=80.81 Aligned_cols=195 Identities=17% Similarity=0.097 Sum_probs=103.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
.-+|.|.+++...+..-. +.....+ .++ ...+ ..+++.+++.-...+ ...+.+|||+|+..++... ..
T Consensus 56 h~~p~v~~ai~~ql~~l~---~~~~~~~-~~~---~~~~-la~~l~~~~p~~~~~--~v~f~~SGseA~e~AlklAr~~t 125 (425)
T PRK07495 56 HRHPRVIAAVKAQLDRFT---HTCHQVV-PYE---NYVR-LAERLNALVPGDFAK--KTIFVTTGAEAVENAVKIARAAT 125 (425)
T ss_pred CCCHHHHHHHHHHHhhcc---CcccCcc-CCH---HHHH-HHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhh
Confidence 457788888877665321 1110001 122 1222 455677776532111 2456789999999998743 23
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCC-------------ceEEEEeceecCCCCC---CCHHHHHHHhhh----c
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDESTGL---VDYDMLEKTAIL----F 250 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~---iD~d~le~~i~~----~ 250 (358)
...+|+...-.|.|.- .+ .....+ ..+..++++.+. .+. -+++++++.+.. .
T Consensus 126 gr~~ii~~~~~yHG~t-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~~~~~ 197 (425)
T PRK07495 126 GRSAVIAFGGGFHGRT-FM------GMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKADVDPQ 197 (425)
T ss_pred CCCeEEEECCCcCCcc-HH------HhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhccCCC
Confidence 3457887664333321 00 000100 012223333221 111 124555666542 2
Q ss_pred CCeEEEEcCC--CCCCC-C---CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCc
Q 018300 251 RPKLIIAGAS--AYPRD-F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPR 320 (358)
Q Consensus 251 ~~klIi~~~s--~~~~~-~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~ 320 (358)
++.+|++.+. +.|.. . -+++|.++|++||+++|.|++|. |+...|... ...+ -.|++ ++.|.|. |.+
T Consensus 198 ~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~--tlsK~l~~G~p 274 (425)
T PRK07495 198 RVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLT--TMAKGLAGGFP 274 (425)
T ss_pred ceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEE--eehhhhcCCcc
Confidence 4667777643 22322 2 28899999999999999999987 654444321 1122 34665 5569984 456
Q ss_pred EEEEEEeC
Q 018300 321 GGMIFFKK 328 (358)
Q Consensus 321 GG~I~~~~ 328 (358)
.|++++++
T Consensus 275 igav~~~~ 282 (425)
T PRK07495 275 LAAVTGRA 282 (425)
T ss_pred ceEEEEcH
Confidence 78888877
No 325
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.42 E-value=1.3e-05 Score=78.93 Aligned_cols=156 Identities=19% Similarity=0.178 Sum_probs=100.1
Q ss_pred HHHHHHHHcCCCCCCCcceEEeC-CCHHHHHHHHHHh-cc--CCCEEEecCCCCCcccccccccchhccccCCceEEEEe
Q 018300 153 CQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-LK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~-SGt~A~~~a~~al-l~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~ 228 (358)
.+..++++.|.+-+ |-... .+|.+-.++.++. .. +.++++++.-.|.-++..- .-...+..++++.
T Consensus 125 fQtlv~dLTGm~VA----NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl------~Tra~~~g~~i~~ 194 (450)
T COG0403 125 FQTLVADLTGLDVA----NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVL------RTRAEGLGIEIEV 194 (450)
T ss_pred HHHHHHHHhCCCcc----cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHH------HhhcccCceEEEE
Confidence 46668899999863 43334 3455555555554 33 3678998765443332210 1112344445554
Q ss_pred ceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CC-CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CC
Q 018300 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 305 (358)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~-~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-ga 305 (358)
++.+ |.+++++. +...+-.+++.+++ +| ...|+++|.+.+|++|+++++=. ..++-+.+..|-+ |+
T Consensus 195 ~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~a----DplaL~LL~pPGe~GA 263 (450)
T COG0403 195 VDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAA----DPLALGLLKPPGEFGA 263 (450)
T ss_pred eccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEe----chhHhhccCCccccCC
Confidence 3332 77788776 44355677887776 56 56789999999999999887632 2222233345556 99
Q ss_pred cEEEEcCcCc-----CccCcEEEEEEeCC
Q 018300 306 DVVTTTTHKS-----LRGPRGGMIFFKKD 329 (358)
Q Consensus 306 Div~~S~hK~-----L~Gp~GG~I~~~~~ 329 (358)
||++++++-. |+||..|+..++++
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~ 292 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDE 292 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHh
Confidence 9999999964 57899999999885
No 326
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.42 E-value=1.9e-05 Score=80.12 Aligned_cols=196 Identities=14% Similarity=0.036 Sum_probs=102.1
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
+-+|.|.+++...+.+ .. +.. .....++ ......+++.+++.....+ ...+++||++|+..++... ..
T Consensus 72 h~~p~v~~ai~~q~~~-~~--~~~-~~~~~~~----~~~~la~~l~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~t 141 (443)
T PRK06058 72 NSAPRVVEAVREQVAR-FT--HTC-FMVTPYE----GYVAVAEQLNRLTPGDHEK--RSALFNSGAEAVENAVKIARSYT 141 (443)
T ss_pred CCCHHHHHHHHHHHHh-cc--Ccc-ccccCCH----HHHHHHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHhh
Confidence 4588999998877653 21 111 0001122 2222455677776532111 2456789999999998732 22
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCC-------------ceEEEEec--eecC-CCCCCC--------HHHHHHH
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPY--RLDE-STGLVD--------YDMLEKT 246 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~~~~--~~~~-~~~~iD--------~d~le~~ 246 (358)
..++|+..+..|.|.- .. .+...+ ..+...++ +.+. .....+ .+.+++.
T Consensus 142 gr~~ii~~~~~yHG~t-----~~--al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (443)
T PRK06058 142 GRQAVVVFDHAYHGRT-----NL--TMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQ 214 (443)
T ss_pred CCCeEEEECCCcCcCh-----HH--HHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHh
Confidence 3478888764433321 00 111111 00111121 1110 000111 2223333
Q ss_pred hhhcCCeEEEEcCCC--CCCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc
Q 018300 247 AILFRPKLIIAGASA--YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR 317 (358)
Q Consensus 247 i~~~~~klIi~~~s~--~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~ 317 (358)
+...++..|++++-. .|... -+++|.++|++||+++|.|+.|. |+.-.|... .-++ ..|+++++ |.|+
T Consensus 215 ~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~g--K~l~ 291 (443)
T PRK06058 215 VGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTA--KGIA 291 (443)
T ss_pred hCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEc--cccc
Confidence 322356677776432 23222 28999999999999999999987 653333211 1122 45888775 9984
Q ss_pred -cCcEEEEEEeC
Q 018300 318 -GPRGGMIFFKK 328 (358)
Q Consensus 318 -Gp~GG~I~~~~ 328 (358)
|.+.|++++++
T Consensus 292 ~G~Pi~av~~~~ 303 (443)
T PRK06058 292 GGLPLSAVTGRA 303 (443)
T ss_pred CCCccEEEEEcH
Confidence 44567888876
No 327
>PRK06105 aminotransferase; Provisional
Probab=98.40 E-value=2.3e-05 Score=79.85 Aligned_cols=202 Identities=14% Similarity=0.047 Sum_probs=107.1
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
+-+|.|.+|+.+.+.+- ........+ .++ .+.++.+++.+++..+.+ ...+.+||++|+.+++....
T Consensus 64 h~~p~i~~Ai~~q~~~~-~~~~~~~~~--~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseAve~AlKlar~~~ 133 (460)
T PRK06105 64 FSEQRLVEAAARQMKKL-PFYHTFSHK--SHG----PVIDLAEKLVAMAPVPMS---KVFFTNSGSEANDTVVKLVWYYN 133 (460)
T ss_pred CCCHHHHHHHHHHHHhC-CCeeccccc--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 34889999998876542 110111111 122 222245567777754332 23556899999999997642
Q ss_pred ---c-CC-CEEEecCCCCCcccccccccchhccccCCc------------eEEEEeceecCC----CC------CCCHHH
Q 018300 190 ---K-PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES----TG------LVDYDM 242 (358)
Q Consensus 190 ---~-pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~~~~----~~------~iD~d~ 242 (358)
. +| .+|+.....|.|.- .+ .....+. .+..++++.... .. ...+++
T Consensus 134 ~~~g~t~r~~il~~~~~yHG~t-~~------a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06105 134 NALGRPEKKKIISRQRGYHGVT-IA------SASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANE 206 (460)
T ss_pred HhcCCCCCcEEEEecCccCCcc-hh------heeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHH
Confidence 1 23 46777654333321 01 1111111 011111110000 00 012356
Q ss_pred HHHHhhh---cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEecccc-ccccccCCcc--CCCC-CCcEEE
Q 018300 243 LEKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVA--DPFK-YCDVVT 309 (358)
Q Consensus 243 le~~i~~---~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~-~Gl~~~g~~~--~pl~-gaDiv~ 309 (358)
+++.+.. .++..|++++- +.|...+ +++++++|++||+++|+|+.|+ +|.. |... .-++ ..|+++
T Consensus 207 le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRt--G~~f~~~~~~v~PDi~~ 284 (460)
T PRK06105 207 LEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRT--GNMFGCETFGIKPDILV 284 (460)
T ss_pred HHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcC--chhhhHHhcCCCCCeee
Confidence 7776632 24567777652 2344444 8999999999999999999985 4433 2211 1122 468885
Q ss_pred EcCcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 310 TTTHKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 310 ~S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+ .|.|+|- ..|.+++++ ++.+.+.
T Consensus 285 ~--gK~lggG~~P~~av~~~~------~i~~~~~ 310 (460)
T PRK06105 285 M--SKQLSSSYQPLSAVLMNE------KVYDPIA 310 (460)
T ss_pred e--ecccccCcccceEEEEcH------HHHHHHh
Confidence 5 4999653 467777776 5655554
No 328
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.39 E-value=2e-05 Score=79.36 Aligned_cols=195 Identities=15% Similarity=0.088 Sum_probs=105.8
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
.-+|.|.+++...+.. .. +.....+ .++ .+....+++.+++.....+ ..++.+||++|+..++... ..
T Consensus 56 h~~p~v~~ai~~ql~~-~~--~~~~~~~-~~~----~~~~la~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK09792 56 HRHPDLVAAVEQQLQQ-FT--HTAYQIV-PYE----SYVTLAEKINALAPVSGQA--KTAFFTTGAEAVENAVKIARAHT 125 (421)
T ss_pred CCCHHHHHHHHHHHHh-cc--CcccCcc-CCH----HHHHHHHHHHHhCCCCCCc--eEEEeCChHHHHHHHHHHHHHhc
Confidence 3478888888776653 21 1111111 122 1122344566665422101 2456789999999998654 22
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCC-------------ceEEEEeceecCCCCC---CCHHHHHHHhhh----c
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDESTGL---VDYDMLEKTAIL----F 250 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~---iD~d~le~~i~~----~ 250 (358)
...+|+.....|.|.-. + .+...+ ..+..++++.+. ++. -|++.+++.+.. .
T Consensus 126 gr~~ii~~~~~yHG~t~-~------~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~~~~ 197 (421)
T PRK09792 126 GRPGVIAFSGGFHGRTY-M------TMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDIEAK 197 (421)
T ss_pred CCCeEEEECCCcCCccH-H------HHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhccCCC
Confidence 33578877643333210 0 011111 012223433221 111 134778877752 3
Q ss_pred CCeEEEEcCCCC--CC-CCC---HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCc
Q 018300 251 RPKLIIAGASAY--PR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPR 320 (358)
Q Consensus 251 ~~klIi~~~s~~--~~-~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~ 320 (358)
++++|++++... |. ..+ +++|.++|+++|+++|+|+.|. |+...|... ..++ ..|++ ++.|.|+ |.+
T Consensus 198 ~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pDi~--t~gK~l~~G~p 274 (421)
T PRK09792 198 QVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS-GFARTGKLFAMDHYADKPDLM--TMAKSLAGGMP 274 (421)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCchhHHHhcCCCCcEE--EeehhhcCCCc
Confidence 467888876432 32 335 8899999999999999999977 543334211 1122 45765 5569984 456
Q ss_pred EEEEEEeC
Q 018300 321 GGMIFFKK 328 (358)
Q Consensus 321 GG~I~~~~ 328 (358)
.|++++++
T Consensus 275 igav~~~~ 282 (421)
T PRK09792 275 LSGVVGNA 282 (421)
T ss_pred eEEEEEcH
Confidence 78888876
No 329
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.38 E-value=1.3e-05 Score=81.27 Aligned_cols=196 Identities=17% Similarity=0.107 Sum_probs=102.3
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.|.+++...+.+......+ .+ .++ .+..+.+++.+++.....+ ...+.+|||+|+..++... ...
T Consensus 71 ~~p~v~~Ai~~ql~~~~~~~~~--~~--~~~----~~~~lAe~L~~~~p~~~~~--~v~f~~SGsEA~e~AlklAr~~tg 140 (441)
T PRK05769 71 AHPKVVKAVKEQAEKFLHYSLT--DF--YYE----PAVELAERLVEIAPGGFEK--KVFFTNSGTESNEAAIKIARYHTG 140 (441)
T ss_pred CCHHHHHHHHHHHHhccCccCc--cc--CCH----HHHHHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHHhC
Confidence 4788888888776532110110 01 122 2233456677776522111 2355779999999998643 223
Q ss_pred CCEEEecCCCCCcccccccccchhccccCC-------------ceEEEEecee------cCCCC----CCCHHHHHH-Hh
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRL------DESTG----LVDYDMLEK-TA 247 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~~~~~~------~~~~~----~iD~d~le~-~i 247 (358)
.++|+...-.|.|. ... .+...+ ..+..++++. +..+. .-+.+.+++ .+
T Consensus 141 r~~Ii~~~~~yHG~-----t~~--~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~ 213 (441)
T PRK05769 141 RKYIIAFLGAFHGR-----TYG--SLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLF 213 (441)
T ss_pred CCeEEEECCCcCCc-----cHH--HHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHH
Confidence 46788765433222 100 011111 0112222210 00000 001244555 22
Q ss_pred h----hcCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcC
Q 018300 248 I----LFRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHK 314 (358)
Q Consensus 248 ~----~~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK 314 (358)
+ ..++.+|++++- ..|...+ +++|.++|+++|+++++|++|+ |+...|... ..++ ..|+++++ |
T Consensus 214 ~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt~~--K 290 (441)
T PRK05769 214 KKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIITLA--K 290 (441)
T ss_pred hhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEEEc--c
Confidence 2 124566777642 2345556 9999999999999999999998 543333221 1122 35888654 9
Q ss_pred cCc-cCcEEEEEEeCC
Q 018300 315 SLR-GPRGGMIFFKKD 329 (358)
Q Consensus 315 ~L~-Gp~GG~I~~~~~ 329 (358)
.++ |.+.|+++++++
T Consensus 291 ~l~~G~p~gav~~~~~ 306 (441)
T PRK05769 291 AIAGGLPLGAVIGRAE 306 (441)
T ss_pred cccCCcccEEEEEehh
Confidence 885 445678888774
No 330
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.38 E-value=2.3e-05 Score=79.46 Aligned_cols=202 Identities=22% Similarity=0.213 Sum_probs=104.4
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
.-+|.|.+|+...+.+ ...... +...++ .+....+++++++....+ ...+.+|||+|+..++....
T Consensus 62 h~~p~v~~ai~~ql~~-l~~~~~---~~~~~~----~~~~la~~l~~~~p~~~~---~v~f~~sGseA~e~AlklAr~~~ 130 (442)
T PRK13360 62 HGRPEIVEAVRAQAGE-LDYAPA---FQMGHP----KAFELANRIAEIAPGGLN---HVFFTNSGSESVDTALKIALAYH 130 (442)
T ss_pred CCCHHHHHHHHHHHHh-CCCccc---CCcCCH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 4578888888776643 211111 111222 222345567777642221 23567899999999986431
Q ss_pred ----cC-CCEEEecCCCCCcccccccccchhccccCCc------------eEEEEeceecCCCCCC----------CHHH
Q 018300 190 ----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTGLV----------DYDM 242 (358)
Q Consensus 190 ----~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~~i----------D~d~ 242 (358)
++ ..+|+.....|.|.- .+ .+...+. .+..++++.+...... +.++
T Consensus 131 ~~~g~~~r~~ii~~~~~yHG~t-~g------als~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (442)
T PRK13360 131 RARGEGSRTRLIGRERGYHGVG-FG------GISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADE 203 (442)
T ss_pred HhcCCCCCcEEEEEcCCcCCcc-Hh------hhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHH
Confidence 12 357887764433320 00 1111110 0112222211000000 1457
Q ss_pred HHHHhhhc---CCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEecccc-ccccccCCccCCCC-CCcEEEEc
Q 018300 243 LEKTAILF---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTTT 311 (358)
Q Consensus 243 le~~i~~~---~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~-~Gl~~~g~~~~pl~-gaDiv~~S 311 (358)
+++.+... ++.+|++++- ..|...+ +++|+++|+++|+++|+|++|. +|-.+......-++ ..|++++
T Consensus 204 le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~- 282 (442)
T PRK13360 204 LERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTC- 282 (442)
T ss_pred HHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeee-
Confidence 77777532 3446777642 2344455 9999999999999999999995 33322111011122 4588755
Q ss_pred CcCcCcc---CcEEEEEEeCCCCchhHHHHHHh
Q 018300 312 THKSLRG---PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 312 ~hK~L~G---p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|.|.| |-|+ +++++ ++.+.+.
T Consensus 283 -gK~l~gG~~P~ga-v~~~~------~i~~~~~ 307 (442)
T PRK13360 283 -AKGLTNGAIPMGA-VFVSS------EIHDAFM 307 (442)
T ss_pred -eeccccCccceEE-EEEcH------HHHHHhh
Confidence 699964 4444 55555 5555544
No 331
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.37 E-value=9.9e-06 Score=81.69 Aligned_cols=145 Identities=18% Similarity=0.144 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHh--ccCCCEEEecCCCCCcccccccccchhccccCC------------ceEEEEeceecCCCCCCCH
Q 018300 175 LSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDESTGLVDY 240 (358)
Q Consensus 175 ~SGt~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~~~~~~~~~~~~iD~ 240 (358)
+||++|+..++... .....+|+.....|.|.- .+ .+...+ ..+..++++.......-|+
T Consensus 110 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t-~~------~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (425)
T PRK09264 110 PTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMT-LG------SLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTL 182 (425)
T ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEECCccCCcc-HH------HHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHH
Confidence 69999999998654 233457777654332320 00 011111 0122233221100001367
Q ss_pred HHHHHHhhhc-----CCeEEEEcCC--CCCC-CC---CHHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCc
Q 018300 241 DMLEKTAILF-----RPKLIIAGAS--AYPR-DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCD 306 (358)
Q Consensus 241 d~le~~i~~~-----~~klIi~~~s--~~~~-~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaD 306 (358)
+++++.+... ++..|++++- ..|. .. .+++|.++|++||+++|+|+.|+ |+.-.|.. . ..++ ..|
T Consensus 183 ~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PD 261 (425)
T PRK09264 183 AYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPD 261 (425)
T ss_pred HHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCC
Confidence 8888887532 2456777642 2232 22 48999999999999999999997 54322321 1 1122 458
Q ss_pred EEEEcCcCcCc--cCcEEEEEEeCC
Q 018300 307 VVTTTTHKSLR--GPRGGMIFFKKD 329 (358)
Q Consensus 307 iv~~S~hK~L~--Gp~GG~I~~~~~ 329 (358)
+++++ |.|+ |-+-|+++++++
T Consensus 262 i~t~~--K~l~~~G~pigav~~~~~ 284 (425)
T PRK09264 262 IVTLS--KSISGYGLPMALVLIKPE 284 (425)
T ss_pred EEEec--cccCCCccceEEEEEchh
Confidence 87664 9985 334578887763
No 332
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.34 E-value=8.6e-06 Score=79.27 Aligned_cols=165 Identities=15% Similarity=0.137 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEE
Q 018300 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (358)
-+++.+.+.+.+.=| .+++|. +|+.++|. .|+..++..+ -.+.|-||++-|.|.= +.. .+...|. .
T Consensus 117 ~vR~~VA~~I~rRDG-~p~~p~-dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPL---YsA-----ti~l~~~--~ 184 (475)
T KOG0258|consen 117 GVRKHVAEFIERRDG-IPADPE-DIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPL---YSA-----TISLLGG--T 184 (475)
T ss_pred hHHHHHHHHHHhccC-CCCCHH-HeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCch---hHH-----HHHHhCC--c
Confidence 455556666777777 555663 56666665 5888888776 4688999999876532 211 2344443 3
Q ss_pred EEeceecCCCC-CCCHHHHHHHhhhc----CCeE-EEEcCCC-CCC---CCCHHHHHHHHHHcCCEEEEecccccccccc
Q 018300 226 SMPYRLDESTG-LVDYDMLEKTAILF----RPKL-IIAGASA-YPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAA 295 (358)
Q Consensus 226 ~~~~~~~~~~~-~iD~d~le~~i~~~----~~kl-Ii~~~s~-~~~---~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~ 295 (358)
.++|-+|++++ .+|.++|++.+++. +|++ +++++-| +|. ...+++|..+|.+.|+.|+.|+.+---+...
T Consensus 185 ~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~ 264 (475)
T KOG0258|consen 185 QVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTT 264 (475)
T ss_pred ccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCC
Confidence 45666776655 89999998877543 5664 5666433 332 4569999999999999999999754333322
Q ss_pred CCccCCC-------C--CCc----EEEEcCcCcC---ccCcEEEE
Q 018300 296 SVVADPF-------K--YCD----VVTTTTHKSL---RGPRGGMI 324 (358)
Q Consensus 296 g~~~~pl-------~--gaD----iv~~S~hK~L---~Gp~GG~I 324 (358)
+.....+ . +.| +.+.|+||.+ +|.|||.+
T Consensus 265 ~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm 309 (475)
T KOG0258|consen 265 GSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM 309 (475)
T ss_pred CcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence 2110001 1 232 3356778887 67888865
No 333
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.34 E-value=5.1e-05 Score=76.46 Aligned_cols=201 Identities=17% Similarity=0.108 Sum_probs=106.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCCHHHHHHHHHHh--c
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI--L 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~-~~~~~v~V~~~SGt~A~~~a~~al--l 189 (358)
.-+|.|.+|+.+.+..-. ....++......++ ..+++.+++-.+ .+ ...+.+||++||.+++... .
T Consensus 72 H~hP~Vv~Av~~q~~~~~---h~~~~~~~~e~~v~-----~ae~L~~~~p~~~~~---~~~f~~sGaeA~E~AiKiAr~~ 140 (447)
T COG0160 72 HNHPRVVEAVKRQLAKLN---HTHTRDLYYEPYVE-----LAEKLTALAPGSGLK---KVFFGNSGAEAVEAAIKIARAY 140 (447)
T ss_pred CCCHHHHHHHHHHHHHhh---cccCCcccchhHHH-----HHHHHHHhCCcccCC---eEEecCCcHHHHHHHHHHHHHH
Confidence 348999999887554321 11112222222222 334456666553 22 3566789999999999654 2
Q ss_pred cCCCEEEecCCCCCcccccccc--cchhccccC-----CceEEEEeceecCCC---------CCCCHHHHHHHhhh----
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFM--TPKRRVSGT-----SIYFESMPYRLDEST---------GLVDYDMLEKTAIL---- 249 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~--~~~~~~~~~-----g~~~~~~~~~~~~~~---------~~iD~d~le~~i~~---- 249 (358)
..+..||...-.+.|. +++.. +..+..... .-.+..+||+..... ..-..+.+++.+..
T Consensus 141 Tgr~~viaf~~afHG~-T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~ 219 (447)
T COG0160 141 TGRPGVIAFDGAFHGR-TLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVG 219 (447)
T ss_pred hCCCcEEEECCccccc-chhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCC
Confidence 3346677766443332 11110 000000000 011334444422110 01122335553322
Q ss_pred -cCCeEEEEcCC--CCCCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC----CCcEEEEcCcCcCcc
Q 018300 250 -FRPKLIIAGAS--AYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLRG 318 (358)
Q Consensus 250 -~~~klIi~~~s--~~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~----gaDiv~~S~hK~L~G 318 (358)
.++..|++++- ..|... -++++.++|+|||+++|+|+.|+ |+--.|.+- .++ -.|++|++ |.++|
T Consensus 220 ~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt-G~GRTG~~f-a~E~~gv~PDivt~a--K~ig~ 295 (447)
T COG0160 220 PEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT-GFGRTGKMF-AFEHFGVEPDIVTLA--KSLGG 295 (447)
T ss_pred CCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccccch-hhhhcCCCCCEEEec--ccccC
Confidence 13556777642 233322 28999999999999999999998 655455321 223 45898766 99955
Q ss_pred -CcEEEEEEeCC
Q 018300 319 -PRGGMIFFKKD 329 (358)
Q Consensus 319 -p~GG~I~~~~~ 329 (358)
..-|.++++++
T Consensus 296 G~Pl~avv~r~e 307 (447)
T COG0160 296 GLPLSAVVGRAE 307 (447)
T ss_pred CCceeEEeccHH
Confidence 44577887773
No 334
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.33 E-value=1.7e-05 Score=80.12 Aligned_cols=185 Identities=17% Similarity=0.085 Sum_probs=99.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pG 192 (358)
-+|.|.+|+.+.+..... +.... ..+....+++.+++.... ...+.+|||+|+..++... .-.|
T Consensus 65 ~~p~v~~Ai~~q~~~~~~-------~~~~~----~~~~~la~~l~~~~p~~~----~v~f~~sGseA~e~AlklAr~~tg 129 (431)
T PRK06209 65 AYPPVVEAVREALQDGCN-------FTRPS----AIELDAAESFLELIDGAD----MVKFCKNGSDATSAAVRLARAYTG 129 (431)
T ss_pred CCHHHHHHHHHHHHhCcC-------CCCCC----HHHHHHHHHHHHhCCccc----eEEEecCHHHHHHHHHHHHHHHhC
Confidence 477888888776653211 11111 122224456777764212 2456789999999998743 1123
Q ss_pred -CEEEecC--CCCCccc-ccccccchhccccCCce----EEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCC
Q 018300 193 -DRIMGLD--LPHGGHL-SHGFMTPKRRVSGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAY 262 (358)
Q Consensus 193 -D~Vl~~~--~~~ggh~-s~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~s~~ 262 (358)
.+|+... .-|+.+- .|+. + .. ..+.. .....++ .-|++++++.++.. +..+|++++ .+
T Consensus 130 r~~i~~~~~~~~h~~~~~~~g~-~---~~-~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~Ep-v~ 197 (431)
T PRK06209 130 RDLVARCADHPFFSTDDWFIGT-T---PM-SAGIPASVSALTVTFR------YNDIASLEALFEDHPGRIACVILEP-AT 197 (431)
T ss_pred CCeEEEeccCcccccccccccc-C---CC-CCCCChhHhccccccC------CCCHHHHHHHHHhCCCCEEEEEEcc-cc
Confidence 3555541 1111010 0111 0 00 00100 0011111 33789999887542 345666653 33
Q ss_pred CC---CCCHHHHHHHHHHcCCEEEEeccccccccccCC-ccCCCC-CCcEEEEcCcCcCcc-CcEEEEEEeC
Q 018300 263 PR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKK 328 (358)
Q Consensus 263 ~~---~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~ 328 (358)
+. ...+++|.++|++||+++|+|++| .|+...+. ...-++ ..|+++ +.|.|+| -.+|++++++
T Consensus 198 g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t--~gK~lggG~p~~av~~~~ 266 (431)
T PRK06209 198 ADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSC--FGKALGNGFAVSALAGKR 266 (431)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceee--ehhhhcCCcccEEEEEHH
Confidence 33 233899999999999999999999 57643211 111122 457755 4699965 3577788876
No 335
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=4.8e-06 Score=81.03 Aligned_cols=195 Identities=20% Similarity=0.226 Sum_probs=126.6
Q ss_pred cccccccCCCC----cHHHHHHHhhhhhcccCCCCCCCc-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH
Q 018300 104 SLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (358)
Q Consensus 104 ~i~lias~n~~----s~~V~~al~~~l~~~~~~G~pg~r-~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt 178 (358)
.+|+ +|.||. .+.+.+.....+ .+|.-|..|-| +|+.-+..-++| +++++++|++.+ +...-|-
T Consensus 96 ~~N~-aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a-----ivYs~gF 164 (467)
T KOG1358|consen 96 VLNF-ASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA-----IVYSYGF 164 (467)
T ss_pred eecc-cchhhhhhcccHHHHHHHHHHH-HHhCCCCcCCCcccccceeecccH----HHHHHhhCCcce-----eeecccc
Confidence 3443 788875 677777766555 46656666655 444433333444 468999999984 5567788
Q ss_pred HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc------CC
Q 018300 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RP 252 (358)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~------~~ 252 (358)
.++..++.++.+.||.|.+.+- .+++- .+.+.++.- ....+ ...|.++++..+.+. +|
T Consensus 165 ~ti~S~ipafsKrGDIi~~de~---~nfaI-----q~GlqlSRS--~i~~F------khndm~~lerll~E~~~~~~K~~ 228 (467)
T KOG1358|consen 165 STIESAIPAFSKRGDIIFVDEA---VNFAI-----QKGLQLSRS--TISYF------KHNDMEDLERLLPEQEDEDQKNP 228 (467)
T ss_pred chhhhcchhhhccCcEEEEehh---hhHHH-----HHHHhhhhh--eeEEe------cCCCHHHHHHhccCcchhhhhcc
Confidence 8999999999999999988652 22221 012222211 12222 245677776654321 12
Q ss_pred ------eEEEEc--CCCCCCCCCHHHHHHHHHHcCCEEEEecccccccccc---CC--cc-CCCCCCcEEEEcCcCcCcc
Q 018300 253 ------KLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VA-DPFKYCDVVTTTTHKSLRG 318 (358)
Q Consensus 253 ------klIi~~--~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~---g~--~~-~pl~gaDiv~~S~hK~L~G 318 (358)
+.|++. ..|+|..+++.+|.++..+|...++.|.+.++|..+. |. .+ .+.+..|++++|+.-.|++
T Consensus 229 k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas 308 (467)
T KOG1358|consen 229 KKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS 308 (467)
T ss_pred ccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc
Confidence 245553 3578999999999999999999999999999998764 21 11 2233689999998877643
Q ss_pred CcEEEEEE
Q 018300 319 PRGGMIFF 326 (358)
Q Consensus 319 p~GG~I~~ 326 (358)
.||+..+
T Consensus 309 -~GgFc~G 315 (467)
T KOG1358|consen 309 -GGGFCAG 315 (467)
T ss_pred -cCceeec
Confidence 3555555
No 336
>PRK06541 hypothetical protein; Provisional
Probab=98.32 E-value=3.2e-05 Score=78.87 Aligned_cols=86 Identities=19% Similarity=0.167 Sum_probs=52.6
Q ss_pred HHHHHHhhh---cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEecccc-ccccccCCccCCCC-CCcEEE
Q 018300 241 DMLEKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVT 309 (358)
Q Consensus 241 d~le~~i~~---~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~-~Gl~~~g~~~~pl~-gaDiv~ 309 (358)
+.+++.+.. .++.+|++++- ..|...+ +++|.++|+++|+++|+|++|. +|-........-++ ..|+++
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt 287 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT 287 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE
Confidence 567777653 23456666542 2344445 8999999999999999999984 44322110011122 468876
Q ss_pred EcCcCcCcc-C-cEEEEEEeC
Q 018300 310 TTTHKSLRG-P-RGGMIFFKK 328 (358)
Q Consensus 310 ~S~hK~L~G-p-~GG~I~~~~ 328 (358)
+.|.|+| . +-|.+++++
T Consensus 288 --~gK~l~~G~~pigav~~~~ 306 (460)
T PRK06541 288 --CAKGITSGYSPLGAMIASD 306 (460)
T ss_pred --ecccccCCccceeEEEEcH
Confidence 5699964 2 455556665
No 337
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.30 E-value=4.4e-05 Score=76.89 Aligned_cols=202 Identities=15% Similarity=0.063 Sum_probs=108.1
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
+-+|.|.+++...+.+-. +.....+ .++ ...+ ..+++.+++.....+ ..++++|||+|+..++... ..
T Consensus 56 h~~p~v~~ai~~ql~~~~---~~~~~~~-~~~---~~~~-la~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK06777 56 HRHPKVVAAVRQQLDQFT---HTAYQIV-PYA---SYVT-LAERINALAPIDGPA--KTAFFTTGAEAVENAVKIARAYT 125 (421)
T ss_pred CCCHHHHHHHHHHHhhcc---ccccccc-CCh---HHHH-HHHHHHHhCCCCCCc--eEEEeCCcHHHHHHHHHHHHHhh
Confidence 447888888877665321 1110011 112 1122 345566776432111 2456789999999998643 23
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCc-------------eEEEEeceecCCCC---CCCHHHHHHHhhh----c
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDESTG---LVDYDMLEKTAIL----F 250 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~---~iD~d~le~~i~~----~ 250 (358)
...+|+.....|.|.- .+ .+.+.+. .+..++++-. ..+ .-|++.+++.+.. .
T Consensus 126 gr~~ii~~~~~yHG~t-~~------~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~~~~~~~~~ 197 (421)
T PRK06777 126 GRPGVIAFGGAFHGRT-LL------TMALTGKVAPYKVGFGPFPGSIFHALYPNE-LHGVSVEEALSSVERLFKADIAPD 197 (421)
T ss_pred CCCeEEEEcCCcCCcc-HH------HHhhcCCCcccccCCCCCCCCcEEcCCCcc-ccCcCHHHHHHHHHHHHHhccCCC
Confidence 3456777664333321 01 1111110 0011122110 000 1236677777642 2
Q ss_pred CCeEEEEcCCC--CCC-CCC---HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCc
Q 018300 251 RPKLIIAGASA--YPR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPR 320 (358)
Q Consensus 251 ~~klIi~~~s~--~~~-~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~ 320 (358)
+...|++++-. .|. ..+ +++|.++|+++|+++|+|+.|. |+...|... ..++ ..|++ ++.|.+. |.+
T Consensus 198 ~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~p 274 (421)
T PRK06777 198 QVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMP 274 (421)
T ss_pred ceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCc
Confidence 34567776432 232 233 8999999999999999999987 664444321 1122 46776 4679984 567
Q ss_pred EEEEEEeCCCCchhHHHHHHh
Q 018300 321 GGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 321 GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|++++++ ++.+.+.
T Consensus 275 igav~~~~------~i~~~~~ 289 (421)
T PRK06777 275 ISAVVGRA------EVMDAPA 289 (421)
T ss_pred eEEEEEcH------HHHhccC
Confidence 78898886 5655554
No 338
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.30 E-value=4.7e-05 Score=76.64 Aligned_cols=203 Identities=12% Similarity=0.001 Sum_probs=105.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
+-+|.|.+|+...+..-. +.+..++ .++ ...+ ..+++.+++.... +....+.+|||+|+..++... ..
T Consensus 49 h~~p~v~~a~~~ql~~~~---~~~~~~~-~~~---~~~~-la~~l~~~~p~~~--~~~v~f~~sGseA~e~AlklAr~~t 118 (420)
T TIGR00700 49 HSHPRVVDAVRTQVAEFT---HTCFMVT-PYE---GYVA-LAEKLNRIAPGSG--PKKSVFFNSGAEAVENAVKIARSYT 118 (420)
T ss_pred CCCHHHHHHHHHHHHhcc---Ccccccc-CCh---HHHH-HHHHHHHhCCCCC--CCEEEEeCCcHHHHHHHHHHHHHhc
Confidence 457888888887765321 1110001 112 1222 3445666664211 112466789999999998643 23
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCc-------------eEEEEeceecCCC----CCC----CHHHHHHHhh-
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST----GLV----DYDMLEKTAI- 248 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~----~~i----D~d~le~~i~- 248 (358)
...+|+.....|.| +... .+...+. .+..++++..... ... +++.+++.+.
T Consensus 119 gr~~ii~~~~~yHG-----~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (420)
T TIGR00700 119 GRPGVVAFDHGFHG-----RTNM--TMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVI 191 (420)
T ss_pred CCCcEEEECCCcCC-----CcHH--HHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHh
Confidence 34567776543322 2100 1111110 0111222110000 001 2456666553
Q ss_pred ---hcCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcC
Q 018300 249 ---LFRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL 316 (358)
Q Consensus 249 ---~~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L 316 (358)
..+...|++++- +.|...+ +++|.++|++||+++|+|+.+. |+...|... ..++ ..|+++ +.|.+
T Consensus 192 ~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-g~gr~g~~~a~~~~~~~pDi~~--lsK~l 268 (420)
T TIGR00700 192 DVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQT-GFARTGAMFACEHEGPEPDLIT--TAKSL 268 (420)
T ss_pred hcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccchhHHHhhcCCCCCEEE--eeccc
Confidence 123456777642 2233222 8999999999999999999976 554344211 1122 467765 67998
Q ss_pred c-cCcEEEEEEeCCCCchhHHHHHHh
Q 018300 317 R-GPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 317 ~-Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
. |.+.|++++++ ++.+.+.
T Consensus 269 ~~G~pig~v~~~~------~i~~~~~ 288 (420)
T TIGR00700 269 ADGLPLSGVTGRA------EIMDAPA 288 (420)
T ss_pred cCCcceEEEEecH------HHHhhcC
Confidence 4 56778888876 5555543
No 339
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.30 E-value=9.9e-06 Score=80.45 Aligned_cols=226 Identities=16% Similarity=0.192 Sum_probs=132.9
Q ss_pred cccC-hHHHHHHHHHHHHhhh-cccccccCCC-CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHH
Q 018300 84 GEAD-PEVCEIITKEKERQFK-SLELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (358)
Q Consensus 84 ~~~d-~~~~~~i~~e~~~~~~-~i~lias~n~-~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~l 160 (358)
+.++ .++++++++|..-... .+++.....+ .++...+-+... .++++.-.+ .-|++ ..++|.+|-..++.+
T Consensus 59 ~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~-~~k~N~l~~--d~fp~---~~~~e~~~Vnm~~~L 132 (491)
T KOG1383|consen 59 KGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEA-YNKFNPLHP--DEFPV---VRKLEAECVNMIANL 132 (491)
T ss_pred CCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHH-HhhcCccCc--cccch---hHHHHHHHHHHHHHH
Confidence 4455 5688888776654322 2222222222 133333333322 233211111 12333 347899999999999
Q ss_pred cCCCCCCCcceEEeCCCHHHHHHHHHHh---cc--CC-C--EEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 161 FNLDENKWGVNVQPLSGSPANFEVYTAI---LK--PH-D--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 161 fg~~~~~~~v~V~~~SGt~A~~~a~~al---l~--pG-D--~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
|+.+.+..+ .-+++||++..++-... .+ +| + .|+++.. .|.+ +. +.....+. +...++++
T Consensus 133 ~~~~~~~~g--~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~---v~~a--~e---K~a~yf~v--~l~~V~~~ 200 (491)
T KOG1383|consen 133 FNAPSDSCG--CGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQN---VHAA--FE---KAARYFEV--ELREVPLD 200 (491)
T ss_pred hcCCccccC--ccccccchHHHHHHHHHHHHHHhccCCCCccccchHH---HHHH--HH---HHHhhEEE--EEEeeecc
Confidence 999875433 23456777855554433 11 11 1 2333221 2211 00 11223333 34455577
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHH-cCCEEEEecccccccccc-CCcc-CCCC----
Q 018300 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADA-VGALLMMDMAHISGLVAA-SVVA-DPFK---- 303 (358)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e-~g~~livD~Ah~~Gl~~~-g~~~-~pl~---- 303 (358)
+.+..+|+.++.+.+.+ ++.+++...+++ |..-|+++|.++.-| +++++++|++-. |++.. +..+ .+++
T Consensus 201 ~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~G-gFi~p~~~~~~~~fdFr~p 278 (491)
T KOG1383|consen 201 EGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLG-GFINPAGYLNEEEFDFRVP 278 (491)
T ss_pred ccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCc-cccccccccCccccccCCC
Confidence 67789999999999875 677777766665 457889999999999 999999999843 55542 3322 2444
Q ss_pred CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 304 YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 304 gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
++--.+.++||+=..|.| ++++.+..
T Consensus 279 ~V~Sisa~~HKYGl~~~G~~~vl~r~k 305 (491)
T KOG1383|consen 279 GVTSISADGHKYGLAPAGSSWVLYRNK 305 (491)
T ss_pred CceeEeeccceeeeeecCcEEEEEccc
Confidence 666778899998666777 88888776
No 340
>PRK06062 hypothetical protein; Provisional
Probab=98.28 E-value=3.7e-05 Score=78.18 Aligned_cols=200 Identities=14% Similarity=0.095 Sum_probs=104.8
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
+-+|.|.+++.+.+.. .....+ .+ .++ .+....+++.+++....+ ...+.+|||+|+..++... ..
T Consensus 69 h~~p~v~~Ai~~q~~~-~~~~~~--~~--~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~t 136 (451)
T PRK06062 69 HQHPKVVAAIQEQAAR-LCTVAP--AH--AND----ARSEAARLIAERAPGDLS---KVFFTNGGADANEHAVRMARLHT 136 (451)
T ss_pred CCCHHHHHHHHHHHHh-cCCcCC--cc--CCH----HHHHHHHHHHHhCCCCCC---EEEEcCChHHHHHHHHHHHHHhh
Confidence 3478888888776643 211111 11 122 122244556677643221 2356789999999998753 22
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCc-----------eEEEEecee--cCCCC-CCC-------HHHHHHHhhh
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRL--DESTG-LVD-------YDMLEKTAIL 249 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-----------~~~~~~~~~--~~~~~-~iD-------~d~le~~i~~ 249 (358)
...+|+...-.|.|. ... .+...+. .+...+++. ....+ .-| ++.++++++.
T Consensus 137 gr~~ii~~~~~yHG~-----t~~--als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 209 (451)
T PRK06062 137 GRPKVLSAYRSYHGG-----TGS--AINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIEL 209 (451)
T ss_pred CCceEEEEeCCCCCC-----CHH--HHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHh
Confidence 345787765333222 100 1111110 001111110 00000 012 5677777753
Q ss_pred c---CCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc--cCCCC-CCcEEEEcCcCcCc
Q 018300 250 F---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR 317 (358)
Q Consensus 250 ~---~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~--~~pl~-gaDiv~~S~hK~L~ 317 (358)
. ++..|++++- +.|...+ ++++.++|+++|+++|+|+.|+ |+.-.|.. ..-++ ..|++++ .|.|+
T Consensus 210 ~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~t~--gK~lg 286 (451)
T PRK06062 210 EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLITF--AKGVN 286 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCeeee--chhhh
Confidence 2 3456777642 2344445 8999999999999999999998 54222321 11122 4687765 59997
Q ss_pred c---CcEEEEEEeCCCCchhHHHHHHh
Q 018300 318 G---PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 318 G---p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
| |-|+ +++++ ++.+.+.
T Consensus 287 gG~~Piga-v~~~~------~i~~~~~ 306 (451)
T PRK06062 287 SGYVPLGG-VAISE------AIAATFA 306 (451)
T ss_pred cCCcCcEE-EEEcH------HHHHHhc
Confidence 5 4444 55555 4555554
No 341
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.28 E-value=1.8e-05 Score=79.98 Aligned_cols=203 Identities=16% Similarity=0.097 Sum_probs=106.1
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
.-+|.|.+|+.+.+..-. ....+ .+ .++ ...+ ..+++.+++....+ ...+.+|||+|+..++....
T Consensus 59 h~~p~i~~Ai~~q~~~~~-~~~~~--~~-~~~---~~~~-la~~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~~ 127 (428)
T PRK07986 59 YNHPQLNAAMKSQIDAMS-HVMFG--GI-THP---PAIE-LCRKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYW 127 (428)
T ss_pred CCCHHHHHHHHHHHhhcC-Ccccc--cc-CCH---HHHH-HHHHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 347888888877664321 10110 00 122 1222 34556677653222 24567799999999987432
Q ss_pred ----cCCCEEEecCCCCCcccccccccchhccccCCc-------------eEEEEeceecCCC---CCCCHHHHHHHhhh
Q 018300 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAIL 249 (358)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~~iD~d~le~~i~~ 249 (358)
....+|+.....|.|. +.+ .....+. .+..++++..... ..-|++++++.++.
T Consensus 128 ~~~g~~r~kii~~~~~yHG~-t~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~ 200 (428)
T PRK07986 128 QAKGEPRQRFLTLRHGYHGD-TFG------AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA 200 (428)
T ss_pred HhcCCCCcEEEEECCCcCCC-cHh------hhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh
Confidence 2346788876443332 111 1111110 0011121110000 02356778877753
Q ss_pred c--CCeEEEEcC--CCC-CCC----CCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc
Q 018300 250 F--RPKLIIAGA--SAY-PRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR 317 (358)
Q Consensus 250 ~--~~klIi~~~--s~~-~~~----~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~ 317 (358)
. +...|++++ ... +.. ..+++|.++|+++|+++|+|++| .|+.-.|... .-++ ..|+++ +.|.|.
T Consensus 201 ~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~ 277 (428)
T PRK07986 201 HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALT 277 (428)
T ss_pred CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhh
Confidence 2 344667764 222 221 23899999999999999999999 5753333211 1122 458885 569985
Q ss_pred cC--cEEEEEEeCCCCchhHHHHHHhh
Q 018300 318 GP--RGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 318 Gp--~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|- ..|.+++++ ++.+.+..
T Consensus 278 gG~~p~~av~~~~------~i~~~~~~ 298 (428)
T PRK07986 278 GGTMTLSATLTTR------EVAETISN 298 (428)
T ss_pred CCcccCcchhchH------HHHHHhhc
Confidence 32 345556665 56666543
No 342
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.28 E-value=3.6e-05 Score=78.14 Aligned_cols=201 Identities=20% Similarity=0.166 Sum_probs=104.7
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
.-+|.|.+++.+.+.+- ..+. . +...++. ..+ ..+++.+++....+ ...+.+||++|+..++....
T Consensus 65 h~~p~v~~ai~~ql~~l-~~~~-~--~~~~~~~---~~~-la~~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~ 133 (445)
T PRK09221 65 HGRPEIVEAVARQAATL-DYAP-A--FQMGHPL---AFE-LAERLAELAPGGLD---HVFFTNSGSESVDTALKIALAYH 133 (445)
T ss_pred CCCHHHHHHHHHHHHhc-cCcc-c--cccCCHH---HHH-HHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 35788888887766532 1111 1 1112221 222 44567777643221 24567899999999986431
Q ss_pred ---c-C-CCEEEecCCCCCcccccccccchhccccCCc------------eEEEEeceecCCCC----------CCCHHH
Q 018300 190 ---K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTG----------LVDYDM 242 (358)
Q Consensus 190 ---~-p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~----------~iD~d~ 242 (358)
. + ..+|+...-.|.|.- .+ .+...+. .+..++++.+.... .-..++
T Consensus 134 ~~~g~~~r~~ii~~~~~yHG~t-~g------als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
T PRK09221 134 RARGQGTRTRLIGRERGYHGVG-FG------GISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADD 206 (445)
T ss_pred HhcCCCCCcEEEEECCCcCccc-hh------hhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHH
Confidence 1 2 247887764333320 00 1111110 01122221100000 001356
Q ss_pred HHHHhhhc---CCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc--cCCCC-CCcEEEE
Q 018300 243 LEKTAILF---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTT 310 (358)
Q Consensus 243 le~~i~~~---~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~--~~pl~-gaDiv~~ 310 (358)
+++.++.. ++..|++++- ..|...+ +++|.++|+++|+++|+|++|+ |+.-.|.. ..-++ ..|++++
T Consensus 207 l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~~~~~~gv~PDi~~~ 285 (445)
T PRK09221 207 LERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAAFAAERFGVTPDIITF 285 (445)
T ss_pred HHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCCcCchhhHHHhcCCCCCEEEe
Confidence 77766532 3456777642 2344555 8999999999999999999986 44222221 01122 3488755
Q ss_pred cCcCcCcc--CcEEEEEEeCCCCchhHHHHHH
Q 018300 311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAI 340 (358)
Q Consensus 311 S~hK~L~G--p~GG~I~~~~~~~~~~~~~~~i 340 (358)
.|.|.| ...|.+++++ ++.+.+
T Consensus 286 --gK~l~gG~~Pi~av~~~~------~i~~~~ 309 (445)
T PRK09221 286 --AKGLTNGAIPMGAVIASD------EIYDAF 309 (445)
T ss_pred --ccccccCcccceeeEEcH------HHHHhh
Confidence 488854 3456677766 555554
No 343
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.28 E-value=3e-05 Score=77.93 Aligned_cols=198 Identities=15% Similarity=0.108 Sum_probs=101.1
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCC-CCCcceEEe-CCCHHHHHHHHHHh--
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQP-LSGSPANFEVYTAI-- 188 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~-~~~~v~V~~-~SGt~A~~~a~~al-- 188 (358)
+-+|.|.+++.+.+... ++.....+ .++ ...+ ..+++.+++.... ... ..+++ +||++|+..++...
T Consensus 51 h~~p~v~~ai~~ql~~~---~~~~~~~~-~~~---~~~~-lae~l~~~~~~~~~~~~-~~~f~~~sGseA~e~AlklAr~ 121 (412)
T TIGR02407 51 HNNPKLKQALIDYLADD---GIIHSLDM-ATE---AKRE-FLETFNEIILKPRGLDY-KVQFPGPTGTNAVESALKLARK 121 (412)
T ss_pred CCCHHHHHHHHHHHhhc---cceecccc-CcH---HHHH-HHHHHHHhccCccCCCc-eEEEeCCCchHHHHHHHHHHhh
Confidence 45888888887766532 11110011 122 1222 3445555532111 000 12343 79999999998754
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCc------------eEEEEeceecCCCCCCCHHHHHHHhhhc-----C
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTGLVDYDMLEKTAILF-----R 251 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~~iD~d~le~~i~~~-----~ 251 (358)
.....+|+.....|.|.- .+ .+..++. .+..++++-......-|++.+++.+..+ +
T Consensus 122 ~tgr~~ii~~~~~yHG~t-~~------als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 194 (412)
T TIGR02407 122 VTGRSNVVSFTNAFHGMT-LG------SLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDL 194 (412)
T ss_pred hcCCCeEEEECCCcCCch-HH------HHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCc
Confidence 233467887664332321 00 1111110 1111222100000012466788777532 3
Q ss_pred CeEEEEcCC--CCCC-C---CCHHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCc--cCc
Q 018300 252 PKLIIAGAS--AYPR-D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPR 320 (358)
Q Consensus 252 ~klIi~~~s--~~~~-~---~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~--Gp~ 320 (358)
+..|++++- +.|. . .-+++|.++|+++|+++|.|+.|+ |+.-.|.. . ...+ ..|+++++ |+|+ |-+
T Consensus 195 ~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v~PDi~~~~--K~lg~~G~p 271 (412)
T TIGR02407 195 PAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGIEPDIVCLS--KSISGYGLP 271 (412)
T ss_pred eEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCCCCCEEEec--hhccCCccc
Confidence 466777542 2233 1 228899999999999999999987 44222221 1 1122 46888765 9985 445
Q ss_pred EEEEEEeCC
Q 018300 321 GGMIFFKKD 329 (358)
Q Consensus 321 GG~I~~~~~ 329 (358)
-|+++.+++
T Consensus 272 igav~~~~~ 280 (412)
T TIGR02407 272 LALTLIKPE 280 (412)
T ss_pred eeEEEEchh
Confidence 688888763
No 344
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.27 E-value=5.5e-05 Score=76.41 Aligned_cols=196 Identities=13% Similarity=0.051 Sum_probs=104.6
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.|.+|+.+.+......++ .++ .+....+++.+++.- .+ ...+.+|||+|+..++... ...
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~~-------~~~----~~~~la~~l~~~~p~-~~---~v~f~~sGseA~e~AlklAr~~tg 134 (428)
T PRK12389 70 AHPHITKAITEAAENGVLYGT-------PTE----LEIEFAKMLKEAIPS-LE---KVRFVNSGTEAVMTTIRVARAYTG 134 (428)
T ss_pred CCHHHHHHHHHHHHhCCccCC-------CCH----HHHHHHHHHHHhCCC-Cc---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 478888888776653211111 122 122244556666642 21 2456789999999998754 233
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCce-EE---EE--ec--eecCCC---CCCCHHHHHHHhhhc--CCeEEEEc
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FE---SM--PY--RLDEST---GLVDYDMLEKTAILF--RPKLIIAG 258 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~---~~--~~--~~~~~~---~~iD~d~le~~i~~~--~~klIi~~ 258 (358)
..+|+...-.|.| +... .+...+.. .. .. .+ ...++. ...|++.+++.+... ++..|+++
T Consensus 135 r~~ii~~~~~yHG-----~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 135 RTKIIKFAGCYHG-----HSDL--VLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred CCEEEEECCCcCC-----ChHH--HHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence 4578776543333 2100 11111100 00 00 00 000000 123788998887543 34566766
Q ss_pred CC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc--cCCCC-CCcEEEEcCcCcCcc-CcEEEEEEeC
Q 018300 259 AS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKK 328 (358)
Q Consensus 259 ~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~--~~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~ 328 (358)
+- ..|...+ +++|.++|+++|+++|+|+.|+ |+.. +.. ..-++ ..|++++ .|.|+| ...|.+++++
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~Rt-~~~~a~~~~gv~PDivt~--gK~lggG~Pi~av~~~~ 283 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT-AFRF-MYGGAQDLLGVEPDLTAL--GKIIGGGLPIGAYGGRK 283 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc-cccc-CcchhhHHhCCCCCeeee--chhhcCCCceeEEeEHH
Confidence 42 2344444 8999999999999999999987 4421 110 11122 4688744 699854 2345556766
Q ss_pred CCCchhHHHHHHh
Q 018300 329 DPVLGVELESAIN 341 (358)
Q Consensus 329 ~~~~~~~~~~~i~ 341 (358)
++.+.+.
T Consensus 284 ------~i~~~~~ 290 (428)
T PRK12389 284 ------DIMEQVA 290 (428)
T ss_pred ------HHHhhhc
Confidence 5666553
No 345
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=98.23 E-value=2.1e-05 Score=77.54 Aligned_cols=150 Identities=15% Similarity=0.202 Sum_probs=98.5
Q ss_pred CCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHH
Q 018300 165 ENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (358)
Q Consensus 165 ~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~l 243 (358)
.++| .+..++|. .+++.++..++++||.|++-...+.+-+. ..+..| +.++|++.| ...+|+|.|
T Consensus 122 ~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~--------s~~a~g--v~~ipv~md--~~Gi~pE~l 187 (472)
T KOG0634|consen 122 YKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ--------SMEALG--VKIIPVKMD--QDGIDPESL 187 (472)
T ss_pred CCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------hccccC--ceEEecccc--CCCCCHHHH
Confidence 4556 45566665 59999999999999999997654433221 233445 467787776 457899999
Q ss_pred HHHhhh--------cCCeEEEEcCC-C--CCCCCC---HHHHHHHHHHcCCEEEEeccccccccccC-------------
Q 018300 244 EKTAIL--------FRPKLIIAGAS-A--YPRDFD---YPRMRQIADAVGALLMMDMAHISGLVAAS------------- 296 (358)
Q Consensus 244 e~~i~~--------~~~klIi~~~s-~--~~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g------------- 296 (358)
++.+.. .+|+++++=++ . +|.... =++|.++|++|+++++.|..++. |-...
T Consensus 188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~-Lq~~~y~~~~~~~~p~~s 266 (472)
T KOG0634|consen 188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYF-LQMNTYNPSLELESPAHS 266 (472)
T ss_pred HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccce-eeccccCCCccccCcccc
Confidence 988743 23667665322 2 333333 35799999999999999998653 11110
Q ss_pred -------CccCCCC---CCc-EEEEcCcCcC-ccCcEEEEEEeCC
Q 018300 297 -------VVADPFK---YCD-VVTTTTHKSL-RGPRGGMIFFKKD 329 (358)
Q Consensus 297 -------~~~~pl~---gaD-iv~~S~hK~L-~Gp~GG~I~~~~~ 329 (358)
..++.+. ... +-.-|++|-+ +|.|-|++.+++.
T Consensus 267 ~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~ 311 (472)
T KOG0634|consen 267 SSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL 311 (472)
T ss_pred HHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH
Confidence 0122222 122 4467999976 6778899999885
No 346
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.22 E-value=3.8e-05 Score=77.60 Aligned_cols=203 Identities=13% Similarity=0.058 Sum_probs=108.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc--
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~-- 190 (358)
.-+|.|.+++...+.. ....... ++.... ..+ ..+++.++++...+ ...+..||++|+..++.....
T Consensus 61 h~~p~v~~ai~~~~~~-~~~~~~~--~~~~~~----~~~-la~~l~~~~~~~~~---~v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDK-MSHVMFG--GFTHKP----AIE-LCQKLVKMTPNALD---CVFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCCHHHHHHHHHHHHh-cCCcccc--ccCCHH----HHH-HHHHHHhhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 4578888888776543 2111111 111111 222 34456677654322 245677999999998875321
Q ss_pred -----CC-CEEEecCCCCCcccccccccchhccccCCce-------------EEEEeceecCCC---CCCCHHHHHHHhh
Q 018300 191 -----PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-------------FESMPYRLDEST---GLVDYDMLEKTAI 248 (358)
Q Consensus 191 -----pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~---~~iD~d~le~~i~ 248 (358)
+| .+|+..+..|.|+.. + .....+.. ....+++..... ..-|++++++.+.
T Consensus 130 ~~~~~~~r~~il~~~~~yHG~t~-~------~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~ 202 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGYHGDTF-G------AMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLME 202 (427)
T ss_pred HhhCCCCccEEEEEcCCcCCccH-h------hhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHH
Confidence 23 578877654433311 0 01111100 011111111000 0125677777775
Q ss_pred hc--CCeEEEEcC--CCCC-C----CCCHHHHHHHHHHcCCEEEEeccccccccccCCc--cCCCC-CCcEEEEcCcCcC
Q 018300 249 LF--RPKLIIAGA--SAYP-R----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 316 (358)
Q Consensus 249 ~~--~~klIi~~~--s~~~-~----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~--~~pl~-gaDiv~~S~hK~L 316 (358)
.. +...|++++ +..+ . ..++++|.++|+++|+++|+|++| .|+...|.. ..-++ ..|+++ +.|.|
T Consensus 203 ~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l 279 (427)
T TIGR00508 203 LHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKAL 279 (427)
T ss_pred hcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhh
Confidence 32 345677765 3322 2 345899999999999999999999 465433322 11223 568886 57998
Q ss_pred ccC--cEEEEEEeCCCCchhHHHHHHhh
Q 018300 317 RGP--RGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 317 ~Gp--~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.|- ..+.++.++ ++.+.++.
T Consensus 280 ~gG~~p~~a~~~~~------~~~~~~~~ 301 (427)
T TIGR00508 280 TGGYMTLSATVTTD------KVAQTISS 301 (427)
T ss_pred hcCcccceEEEEcH------HHHHHHhc
Confidence 442 346666665 56666654
No 347
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.15 E-value=8.4e-05 Score=75.52 Aligned_cols=202 Identities=16% Similarity=0.081 Sum_probs=104.4
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
.-+|.|.+++.+.+......+.. .+ .++ .+....+++.+++.....+ ...+++|||+|+.+++... ..
T Consensus 70 h~~p~v~~ai~~q~~~~~~~~~~---~~-~~~----~~~~la~~L~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~t 139 (451)
T PRK06918 70 HSHPKVKEALHKQVDQYIHTGFN---VM-MYE----PYIELAEKLAALAPGSFDK--KVLFLNSGAEAVENAVKIARKYT 139 (451)
T ss_pred CCCHHHHHHHHHHHHhccCcccc---cc-ccH----HHHHHHHHHHHhCCCCCCC--EEEEcCCcHHHHHHHHHHHHHHh
Confidence 45888999988776542111110 01 122 2233455677777533211 2456789999999998643 22
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCc-------------eEEEEeceecC--CCCCCC-------HHHHHHHhh
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDE--STGLVD-------YDMLEKTAI 248 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~~iD-------~d~le~~i~ 248 (358)
...+|+.....|.|.-. + .+...+. .+..++++... ..+..+ ++.+++.+.
T Consensus 140 gr~~ii~~~~~yHG~t~-~------~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (451)
T PRK06918 140 KRQGIISFSRGFHGRTL-M------TMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFI 212 (451)
T ss_pred CCCcEEEECCCcCccch-h------hhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHH
Confidence 34567776543333210 0 1111110 01112222100 001100 123343331
Q ss_pred ----hcCCeEEEEcCCC--CCCC---CC-HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC----CCcEEEEcCcC
Q 018300 249 ----LFRPKLIIAGASA--YPRD---FD-YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHK 314 (358)
Q Consensus 249 ----~~~~klIi~~~s~--~~~~---~d-l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~----gaDiv~~S~hK 314 (358)
..+...|++++-. .|.. .+ +++|.++|+++|+++|.|+.+. |+...|.. .++. ..|++ ++.|
T Consensus 213 ~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~t-g~gr~g~~-~a~~~~~v~pDi~--t~sK 288 (451)
T PRK06918 213 SEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQT-GFARTGKY-FAIEHFDVVPDLI--TVSK 288 (451)
T ss_pred hhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CcCccCce-ehhHhcCCCCCEE--eeeh
Confidence 1234567776422 2321 12 8899999999999999999975 55434422 1222 36755 6679
Q ss_pred cC-ccCcEEEEEEeCCCCchhHHHHHHh
Q 018300 315 SL-RGPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 315 ~L-~Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.| +|.+-|++++++ ++.+.+.
T Consensus 289 ~l~~G~pig~v~~~~------~i~~~~~ 310 (451)
T PRK06918 289 SLGAGVPISGVIGRK------EIMDESA 310 (451)
T ss_pred hhcCCCccEEEEEcH------HHHhccC
Confidence 98 456778888876 5555553
No 348
>PRK06149 hypothetical protein; Provisional
Probab=98.14 E-value=0.00022 Score=79.11 Aligned_cols=205 Identities=11% Similarity=-0.002 Sum_probs=102.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.|.+|+.+.+..-. ...++ ..+. .. ...+++++++.-..+ ...+++|||+||..++... ...
T Consensus 600 ~hp~v~~Ai~~q~~~l~----~~~~~--~~~~---~~-elae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg 666 (972)
T PRK06149 600 GHPRLAAAAARQWSLLN----TNSRF--HYAA---VA-EFSERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASG 666 (972)
T ss_pred CCHHHHHHHHHHHHhcc----ccccc--cCHH---HH-HHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcC
Confidence 48899999877664321 11222 1222 22 234557777732221 2466789999999999732 223
Q ss_pred CCEEEecCCCCCccc-ccccccch--hcccc-CC--ceEEEEeceecCCCC---CCC-----HHHHHHHhhh-----cCC
Q 018300 192 HDRIMGLDLPHGGHL-SHGFMTPK--RRVSG-TS--IYFESMPYRLDESTG---LVD-----YDMLEKTAIL-----FRP 252 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~-s~~~~~~~--~~~~~-~g--~~~~~~~~~~~~~~~---~iD-----~d~le~~i~~-----~~~ 252 (358)
..+|++.+-.|.|.- .-...... ..... .. .++..++++-. ... ..| .+++++.++. .++
T Consensus 667 r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 745 (972)
T PRK06149 667 RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNT-YRGRFRGADSAADYVRDVVAQLEELDASGRGL 745 (972)
T ss_pred CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcc-cCCcCCCcccHHHHHHHHHHHHHHHhhcCCce
Confidence 356776654333221 00000000 00000 00 01111211100 000 111 2344433321 234
Q ss_pred eEEEEcC--CCCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCccCC---CC-CCcEEEEcCcCcCcc-CcE
Q 018300 253 KLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCDVVTTTTHKSLRG-PRG 321 (358)
Q Consensus 253 klIi~~~--s~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p---l~-gaDiv~~S~hK~L~G-p~G 321 (358)
..|++++ ++.|...+ ++++.++|++||+++|+|+.|+ |+.-.|..... ++ ..|++++ .|.|+| ...
T Consensus 746 AavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~t-GfGRtG~~~~a~e~~gv~PDivt~--gK~lg~G~Pl 822 (972)
T PRK06149 746 AGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQV-GYGRLGHYFWGFEQQGVVPDIITM--AKGMGNGHPL 822 (972)
T ss_pred EEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehh-cCCccCccchhhhhcCCCCCEEEe--cccccCCeee
Confidence 5677764 22344445 8999999999999999999994 33222321001 12 4688855 599954 345
Q ss_pred EEEEEeCCCCchhHHHHHHh
Q 018300 322 GMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~ 341 (358)
|++++++ ++.+.+.
T Consensus 823 ~av~~~~------~i~~~~~ 836 (972)
T PRK06149 823 GAVITRR------EIAEALE 836 (972)
T ss_pred EEEEEcH------HHHhhhc
Confidence 7777777 5666654
No 349
>PRK07480 putative aminotransferase; Validated
Probab=98.13 E-value=0.00014 Score=74.06 Aligned_cols=91 Identities=18% Similarity=0.156 Sum_probs=54.3
Q ss_pred HHHHHHhhh---cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEE
Q 018300 241 DMLEKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVV 308 (358)
Q Consensus 241 d~le~~i~~---~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv 308 (358)
+.+++.+.. .++..|++++- +.|...+ +++++++|++||+++|+|+.|+ |+.-.|.. - .-++ ..|++
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 284 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVIC-GFGRTGEWFGSQHFGIKPDLM 284 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhhhhhcCCCCCee
Confidence 556554432 23456777642 2233333 8999999999999999999986 44222321 1 1122 45887
Q ss_pred EEcCcCcCccC--cEEEEEEeCCCCchhHHHHHH
Q 018300 309 TTTTHKSLRGP--RGGMIFFKKDPVLGVELESAI 340 (358)
Q Consensus 309 ~~S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i 340 (358)
++ .|.|+|- .-|.+++++ ++.+.+
T Consensus 285 ~~--gK~l~gG~~Pi~av~~~~------~i~~~~ 310 (456)
T PRK07480 285 TI--AKGLTSGYIPMGAVGVGD------RVAEVL 310 (456)
T ss_pred ee--ehhhccCCccceEEEEcH------HHHHHH
Confidence 66 5999652 345555555 566555
No 350
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.12 E-value=0.00018 Score=73.20 Aligned_cols=202 Identities=11% Similarity=0.053 Sum_probs=107.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
+-+|.|.+++...+.. ....... . + .++ ......+++.++++.... ...+.+|||+|+..++....
T Consensus 70 h~~p~v~~Ai~~ql~~-~~~~~~~-~-~-~~~----~~~~lAe~L~~~~p~~~~---~v~f~~sGseAve~AlKlA~~~~ 138 (453)
T PRK06943 70 HANPRINAALKDQLDT-LEHAMLA-G-C-THE----PAIELAERLAALTGGTLG---HAFFASDGASAVEIALKMSFHAW 138 (453)
T ss_pred CCCHHHHHHHHHHHHh-cCCcccc-c-c-CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCCHHHHHHHHHHHHHHH
Confidence 4578888888776643 2111110 0 1 122 222245567777764322 24567799999999987541
Q ss_pred ----cC-CCEEEecCCCCCcccccccccchhccccCCc------------eEEEEeceecCC--CC-------CCCHHHH
Q 018300 190 ----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES--TG-------LVDYDML 243 (358)
Q Consensus 190 ----~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~~~~--~~-------~iD~d~l 243 (358)
.+ ..+|+.....|.|. .. ..+...+. .+..++++.... .+ .-|++++
T Consensus 139 ~~rg~~~r~~Ii~~~~~yHG~-----t~--gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (453)
T PRK06943 139 RNRGRGDKREFVCLANGYHGE-----TI--GALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADV 211 (453)
T ss_pred HHhCCCCCCEEEEECCCcCCC-----cH--HhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHH
Confidence 12 35788776433332 10 01111110 011222221000 00 0134677
Q ss_pred HHHhhhc--CCeEEEEcCC--C-CCCC-C---CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEc
Q 018300 244 EKTAILF--RPKLIIAGAS--A-YPRD-F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (358)
Q Consensus 244 e~~i~~~--~~klIi~~~s--~-~~~~-~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S 311 (358)
++.+... ++..|++++- . .|.. . -++++.++|++||+++|.|+.++ |+.-.|... .-++ ..|+++++
T Consensus 212 ~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-G~GRtG~~fa~~~~gv~PDivt~g 290 (453)
T PRK06943 212 RRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAV-GCGRTGTFFACEQAGVWPDFLCLS 290 (453)
T ss_pred HHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCCCcchhHHHhCCCCCCeEeee
Confidence 7776532 4556777652 2 2322 2 28999999999999999999976 442233211 1123 56899775
Q ss_pred CcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 312 THKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 312 ~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
|.|.|- ..|.+++++ ++.+.+.
T Consensus 291 --Kgl~gG~~Pi~av~~~~------ei~~~~~ 314 (453)
T PRK06943 291 --KGISGGYLPLSLVLSRD------AIFAAFY 314 (453)
T ss_pred --hhhccCcccceEEEEcH------HHHHhhc
Confidence 988542 456677776 5665554
No 351
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.12 E-value=9.9e-05 Score=74.46 Aligned_cols=91 Identities=16% Similarity=0.047 Sum_probs=57.8
Q ss_pred HHHHHHhhhcCCeEEEEcCC--C-CCC----CCCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEE
Q 018300 241 DMLEKTAILFRPKLIIAGAS--A-YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (358)
Q Consensus 241 d~le~~i~~~~~klIi~~~s--~-~~~----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~ 310 (358)
+.+++.+. .+...|++++- . .|. ...++++.++|++||+++|+|++|. |+.-.|... ...+ ..|++++
T Consensus 191 ~~~~~~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDi~t~ 268 (422)
T PRK05630 191 RSLELLID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIAT-GFGRTGELFATLAAGVTPDIMCV 268 (422)
T ss_pred HHHHHHHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccee-CCCcCchhhHHHhcCCCCCeeee
Confidence 34455443 35667777752 1 232 2238999999999999999999984 653233211 1122 4578844
Q ss_pred cCcCcCcc--CcEEEEEEeCCCCchhHHHHHHh
Q 018300 311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 311 S~hK~L~G--p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|.|.| +.+|++++++ ++.+.+.
T Consensus 269 --gK~l~gG~~p~~av~~~~------~i~~~~~ 293 (422)
T PRK05630 269 --GKALTGGFMSFAATLCTD------KVAQLIS 293 (422)
T ss_pred --echhhcCccccceeeccH------HHHHHHh
Confidence 699955 5788888887 5655553
No 352
>PRK07482 hypothetical protein; Provisional
Probab=98.11 E-value=0.00019 Score=73.31 Aligned_cols=203 Identities=17% Similarity=0.068 Sum_probs=104.4
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
.-+|.|.+|+...+..-. ...+...+ .++ .+....+++.+++..+.+ ...+.+|||+|+..++....
T Consensus 66 h~~p~v~~Av~~q~~~~~-~~~~~~~~--~~~----~~~~lAe~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~ 135 (461)
T PRK07482 66 YGRTEVAEAIAEQAKELA-YYHTYVGH--GTE----ASITLSKRIIDRAPAGMS---KVYYGLSGSDANETQIKLVWYYN 135 (461)
T ss_pred CCCHHHHHHHHHHHHhcC-cccccccc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHHH
Confidence 347888888887665321 00110001 122 222245557777643222 24567899999999987542
Q ss_pred ---c-C-CCEEEecCCCCCcccccccccchhccccCCc------------eEEEEecee--c-CCCC-------CCCHHH
Q 018300 190 ---K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRL--D-ESTG-------LVDYDM 242 (358)
Q Consensus 190 ---~-p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~-------~iD~d~ 242 (358)
. + ..+|+.....|.|. +.+ .....+. .+..++++. + +..+ .-+++.
T Consensus 136 ~~~g~~~r~~Ii~~~~~YHG~-t~g------a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 208 (461)
T PRK07482 136 NVLGRPEKKKIISRWRGYHGS-GVV------TGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADE 208 (461)
T ss_pred HhcCCCCCceEEEecCccCCc-cHh------hhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHH
Confidence 1 2 35688776443332 100 1111110 011111110 0 0000 014577
Q ss_pred HHHHhhh---cCCeEEEEcCCC--CCCC-CC---HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEE
Q 018300 243 LEKTAIL---FRPKLIIAGASA--YPRD-FD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT 310 (358)
Q Consensus 243 le~~i~~---~~~klIi~~~s~--~~~~-~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~ 310 (358)
+++.+.. .++..|++++-. .|.. .+ +++|+++|++||+++|+|+.++ |+.-.|.. - .-++ ..|++++
T Consensus 209 l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~ 287 (461)
T PRK07482 209 LEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVT-GFGRLGSMFGSDHYGIEPDLITV 287 (461)
T ss_pred HHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCcchhhHHhcCCCCCEEEE
Confidence 7777642 235567776422 2322 22 8899999999999999999976 54222221 1 1123 5699986
Q ss_pred cCcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 311 S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+ |.|+|- .-|.+++++ ++.+.+.
T Consensus 288 g--Kgl~gG~~Pi~av~~~~------~i~~~~~ 312 (461)
T PRK07482 288 A--KGLTSAYAPLSGSIVGE------KVWDVLE 312 (461)
T ss_pred c--cccccCccccceeeecH------HHHHHHh
Confidence 5 999542 345555555 4555554
No 353
>PRK05965 hypothetical protein; Provisional
Probab=98.09 E-value=0.00016 Score=73.70 Aligned_cols=203 Identities=15% Similarity=0.087 Sum_probs=104.9
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
+-+|.|.+|+.+.+.+-. +....+...++ .+..+.+++.+++..+.+ ...+.+|||+|+..++....
T Consensus 62 h~~p~i~~Ai~~q~~~~~---~~~~~~~~~~~----~~~~lae~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~ 131 (459)
T PRK05965 62 YGQESIVEAAAEQMRELP---YATGYFHFGSE----PAIRLAAKLAERAPGSLN---HVYFTLGGSDAVDSAVRFIRHYW 131 (459)
T ss_pred CCCHHHHHHHHHHHHhcC---CcccccccCCH----HHHHHHHHHHhhCCCCcC---EEEEeCChhHHHHHHHHHHHHHH
Confidence 347889999887765321 11101111122 122244556777643322 23556799999999986531
Q ss_pred ---c-C-CCEEEecCCCCCcccccccccchhccccCC------------ceEEEEeceecCCC-CCCC--------HHHH
Q 018300 190 ---K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDEST-GLVD--------YDML 243 (358)
Q Consensus 190 ---~-p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~~~~~~~~~~-~~iD--------~d~l 243 (358)
. + ..+|+..+..|.|.-. + .+...+ .....++++..... ..-| ++++
T Consensus 132 ~~~g~~~r~kii~~~~~YHG~t~-~------a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (459)
T PRK05965 132 NATGRPSKKQFISLERGYHGSSS-V------GAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAAL 204 (459)
T ss_pred HhcCCCCccEEEEecCCcCcccH-H------HHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHH
Confidence 1 2 3578877644333210 0 001111 00111221110000 0112 2567
Q ss_pred HHHhhhc---CCeEEEEcCCC--CCCCC-C---HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEc
Q 018300 244 EKTAILF---RPKLIIAGASA--YPRDF-D---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (358)
Q Consensus 244 e~~i~~~---~~klIi~~~s~--~~~~~-d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S 311 (358)
++.+... +...|++++-. .|... + +++++++|++||+++|.|+.++ |+.-.|..- .-++ ..|+++++
T Consensus 205 ~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g 283 (459)
T PRK05965 205 RAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT-GFGRTGPLFACEAEGVVPDLMTVA 283 (459)
T ss_pred HHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-cCccCchhhhHhhcCCCCCeEEec
Confidence 7776532 34567776422 23322 2 7999999999999999999976 542223211 1122 46898775
Q ss_pred CcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 312 THKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 312 ~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
|.|+|- .-|.+++++ ++.+.+.
T Consensus 284 --Kgl~gG~~Pi~av~~~~------~i~~~~~ 307 (459)
T PRK05965 284 --KGLTSGYVPMGAVLMSD------HVYQGIA 307 (459)
T ss_pred --hhhccCCcceeEEEEcH------HHHHHHh
Confidence 998543 456666666 5666554
No 354
>PRK07678 aminotransferase; Validated
Probab=98.08 E-value=0.00016 Score=73.58 Aligned_cols=199 Identities=17% Similarity=0.100 Sum_probs=103.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---c
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al---l 189 (358)
.-+|.|.+|+...+..-. +... .+ .++ .+..+.+++.++++... ...+.+||++|+..++... .
T Consensus 63 h~~p~v~~ai~~q~~~~~---~~~~-~~-~~~----~~~~lae~l~~~~~~~~----~v~f~~sGseA~e~AlklAr~~t 129 (451)
T PRK07678 63 YGRKELAEAAYEQLKTLS---YFPL-TQ-SHE----PAIKLAEKLNEWLGGEY----VIFFSNSGSEANETAFKIARQYH 129 (451)
T ss_pred CCCHHHHHHHHHHHHhcC---cccc-cc-CCH----HHHHHHHHHHHhCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 347888888877654321 1110 11 222 12224556777776532 2355679999999998653 2
Q ss_pred ----cCC-CEEEecCCCCCcccccccccchhccccCCc------------eEEEEeceecCCCC-------CCCH---HH
Q 018300 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTG-------LVDY---DM 242 (358)
Q Consensus 190 ----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~-------~iD~---d~ 242 (358)
++| .+|+...-.|.|.-. + .+...+. .+..++++-. ... ..|. +.
T Consensus 130 ~~~g~~~r~~ii~~~~~yHG~t~-~------als~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 201 (451)
T PRK07678 130 AQKGEPHRYKFISRYRAYHGNSM-G------ALAATGQAQRKYKYEPLAPGFLHVPPPDC-YRMPGIESEDIYDLECVKE 201 (451)
T ss_pred HhcCCCCCcEEEEECCCcCCccH-H------HhhcCCCcccccccCCCCCCCEEeCCCcc-ccccccCChHHHHHHHHHH
Confidence 123 578876643333210 0 1111111 0111111100 000 0112 23
Q ss_pred HHHHhhh---cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc--cCCCC-CCcEEEE
Q 018300 243 LEKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTT 310 (358)
Q Consensus 243 le~~i~~---~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~--~~pl~-gaDiv~~ 310 (358)
+++.+.. .++..|++++- ..|...+ +++++++|++||+++|+|+.|. |+.-.|.. ..-++ ..|++++
T Consensus 202 l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~~~~~~gv~PDivt~ 280 (451)
T PRK07678 202 IDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVIC-GFGRTGKAFGFMNYGVKPDIITM 280 (451)
T ss_pred HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-cCCcCchhHHHHhcCCCCCEEEe
Confidence 5555541 23556777652 2333222 8999999999999999999985 33212211 01133 5689876
Q ss_pred cCcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 311 S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|.|+|- .-|.+++++ ++.+.+.
T Consensus 281 --gK~lggG~~Pi~av~~~~------~i~~~~~ 305 (451)
T PRK07678 281 --AKGITSAYLPLSATAVKK------EIYEAFK 305 (451)
T ss_pred --ecccccCCcceeEEEEcH------HHHHHHh
Confidence 5998642 456677766 5666554
No 355
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.06 E-value=0.00014 Score=73.46 Aligned_cols=202 Identities=14% Similarity=0.045 Sum_probs=104.9
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
+-.|.|.+++...+.+- . +.....+ .++ ... ...+++.+++....+ ...+.+||++|+..++....
T Consensus 60 h~~p~v~~ai~~q~~~~-~--~~~~~~~-~~~---~~~-~lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~ 128 (429)
T PRK06173 60 YNHPRLNAAATNQLAKM-S--HIMFGGF-THE---PAV-ELAQKLLEILPPSLN---KIFFADSGSVAVEVAMKMALQYQ 128 (429)
T ss_pred CCCHHHHHHHHHHHHhc-C--Ccccccc-CCH---HHH-HHHHHHHhhCCCCcC---EEEEeCCchHHHHHHHHHHHHHH
Confidence 44788888887765432 1 1110001 122 122 234556666642221 24567899999999986532
Q ss_pred ----cCC-CEEEecCCCCCcccccccccchhccccCCc-------------eEEEEeceecCCC---CCCCHHHHHHHhh
Q 018300 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAI 248 (358)
Q Consensus 190 ----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~~iD~d~le~~i~ 248 (358)
++| .+|+.....|.|. +.+ ....++. .+..++++..... ..-+++.+++.+.
T Consensus 129 ~~~g~~~r~~ii~~~~~yHG~-t~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~ 201 (429)
T PRK06173 129 QAKGEVQRTKFATIRSGYHGD-TWH------AMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLE 201 (429)
T ss_pred HHhCCCCCcEEEEECCCcCCc-chh------hhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHH
Confidence 133 4687776444332 111 1111110 0111222111000 0114566777775
Q ss_pred hc--CCeEEEEcCC--CC-CCC-C---CHHHHHHHHHHcCCEEEEeccccccccccCCc--cCCCC-CCcEEEEcCcCcC
Q 018300 249 LF--RPKLIIAGAS--AY-PRD-F---DYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 316 (358)
Q Consensus 249 ~~--~~klIi~~~s--~~-~~~-~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~--~~pl~-gaDiv~~S~hK~L 316 (358)
.. ++..|++++- .. |.. . -+++++++|++||+++|+|++| .|+.-.|.. ..-++ ..|+++ +.|.|
T Consensus 202 ~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l 278 (429)
T PRK06173 202 QKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKAL 278 (429)
T ss_pred hCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhh
Confidence 32 3556777752 22 222 2 2889999999999999999999 675333322 11122 468887 56998
Q ss_pred ccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 317 RGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 317 ~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|- ..+.++.++ ++.+.+.
T Consensus 279 ~gG~~p~~a~~~~~------~i~~~~~ 299 (429)
T PRK06173 279 TGGYLTLSATITTE------AIAQTIC 299 (429)
T ss_pred hCCccccceEEecH------HHHHHHh
Confidence 532 455666665 4555553
No 356
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.06 E-value=0.00011 Score=74.91 Aligned_cols=202 Identities=17% Similarity=0.090 Sum_probs=106.8
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
.-+|.|.+++...+..- ..+.. ....++ .+....+++++++..... ...+.+|||+|+..++....
T Consensus 72 h~~p~v~~Ai~~ql~~l-~~~~~---~~~~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseAve~AlklAr~~~ 140 (460)
T PRK06916 72 HQVPELDEAIREQLNKI-AHSTL---LGLANV----PSILLAEKLIEVVPEGLK---KVFYSDSGATAVEIAIKMAFQYW 140 (460)
T ss_pred CCCHHHHHHHHHHHHhC-CCccc---cccCCH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 55888999988776542 11111 111122 222345567777753322 24667899999999987432
Q ss_pred ----cCC-CEEEecCCCCCcccccccccchhccccCCce------------EEEEeceec---CCCC------CCCHHHH
Q 018300 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY------------FESMPYRLD---ESTG------LVDYDML 243 (358)
Q Consensus 190 ----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~------------~~~~~~~~~---~~~~------~iD~d~l 243 (358)
.+| .+|+.....|.|. .. ..+...+.. +..++++.. +..+ .-|++++
T Consensus 141 ~~~g~tgr~~ii~~~~~YHG~-----t~--~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l 213 (460)
T PRK06916 141 QNKGKPKKQRFVTLKNAYHGD-----TI--GAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEEL 213 (460)
T ss_pred HhcCCCCCcEEEEECCcCCcc-----cH--HhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 233 5788776433332 10 011111110 111222100 0000 1235666
Q ss_pred HHHhhh--cCCeEEEEcCC---CCCCCC-C---HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEc
Q 018300 244 EKTAIL--FRPKLIIAGAS---AYPRDF-D---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (358)
Q Consensus 244 e~~i~~--~~~klIi~~~s---~~~~~~-d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S 311 (358)
++.++. .+...|++++- +.|... + ++++.++|+++|+++|.|+.|. |+.-.|... ..++ ..|++++
T Consensus 214 ~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~T-G~GRtG~~~a~~~~gv~PDiv~~- 291 (460)
T PRK06916 214 EELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVAT-GFGRTGKMFACEHENVTPDIMTA- 291 (460)
T ss_pred HHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCcCchhhHHHhcCCCCCeeee-
Confidence 776653 23456777651 223222 2 8999999999999999999985 542233211 1122 4688865
Q ss_pred CcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 312 THKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 312 ~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|.|.|- .-|.+++++ ++.+.+.
T Consensus 292 -gK~l~gG~~Pi~av~~~~------ei~~~~~ 316 (460)
T PRK06916 292 -GKGLTGGYLPIAITVTTD------EIYNAFY 316 (460)
T ss_pred -ehhhhcCccccceeeecH------HHHHHhh
Confidence 5988542 346666666 5555543
No 357
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.06 E-value=6.5e-06 Score=80.93 Aligned_cols=163 Identities=15% Similarity=0.086 Sum_probs=92.8
Q ss_pred HHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhc--cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC
Q 018300 157 ALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (358)
Q Consensus 157 la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (358)
+.+..|+....- +.+. .-.| ..+.+++.++- ..++.|+.+..+| .|. .+.+..+|....+++-...+
T Consensus 65 ~~~~~G~~~~~~-~~~v-P~atgm~l~l~l~~l~~r~~a~~Viw~ridq---kSc-----~kai~~AGl~~~vV~~~~~~ 134 (389)
T PF05889_consen 65 ALRLAGLRSVKS-CFVV-PMATGMSLTLCLLALRMRPKAKYVIWPRIDQ---KSC-----FKAIERAGLEPVVVENVLEG 134 (389)
T ss_dssp HHHHTTHTTHCE-EEEE-SS-HHHHHHHHHHHHHHHCT--EEEEEEEET---HHH-----HHHHHHTT-EEEEE-EEEET
T ss_pred HHHHcCCccccc-eEEE-ecccccHHHHHHHHHhcccCCceEEEeeccc---cch-----HHHHHhcCCeEEEeeccCCC
Confidence 445678874311 2333 3344 35666666663 4577888765533 232 24566778765555533443
Q ss_pred CCCCCCHHHHHHHhhhcC--CeEEEEcCCC--CCCCCC-HHHHHHHHHHcCCEEEEecccccccccc-CCccCC--CCCC
Q 018300 234 STGLVDYDMLEKTAILFR--PKLIIAGASA--YPRDFD-YPRMRQIADAVGALLMMDMAHISGLVAA-SVVADP--FKYC 305 (358)
Q Consensus 234 ~~~~iD~d~le~~i~~~~--~klIi~~~s~--~~~~~d-l~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~~~~p--l~ga 305 (358)
+.-..|.+.+++.+++.. +.+.++..+. +|+..| +++|+++|+++|++.++.+|+++--... ..+... ..-.
T Consensus 135 d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRv 214 (389)
T PF05889_consen 135 DELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRV 214 (389)
T ss_dssp TEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTC
T ss_pred CeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCc
Confidence 434678889998886543 3455555443 688888 9999999999999999999976500000 000000 0146
Q ss_pred cEEEEcCcCcCccCcEEEEEEeCC
Q 018300 306 DVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 306 Div~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
|+++-|+-|.|--|-||.++...+
T Consensus 215 da~vqS~dkNF~VPvGgai~As~~ 238 (389)
T PF05889_consen 215 DAFVQSTDKNFMVPVGGAIMASFD 238 (389)
T ss_dssp SEEEEEHHHHHCEESSHEEEEESS
T ss_pred ceeeeecCCCEEecCCCcEEEecC
Confidence 899999999998888866665544
No 358
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.06 E-value=2.8e-05 Score=76.57 Aligned_cols=171 Identities=17% Similarity=0.152 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---ccCC----------CEEEecCCCCCcccccccccchh
Q 018300 149 LETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKPH----------DRIMGLDLPHGGHLSHGFMTPKR 215 (358)
Q Consensus 149 lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al---l~pG----------D~Vl~~~~~~ggh~s~~~~~~~~ 215 (358)
+|..+-.+..++.|-+... ..++..+|+.+|.-++.+- .-|+ +-|+.++- .+|+|.- +
T Consensus 142 mE~~vl~km~~ivGw~~~~--DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSe--esHYSi~-----k 212 (510)
T KOG0629|consen 142 MEEEVLAKMREIVGWEEGG--DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSE--ESHYSIK-----K 212 (510)
T ss_pred ehHHHHHHHHHHhCCCCCC--CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecc--cchhhHH-----H
Confidence 4555555667777877631 3577788888877766542 1122 34554432 3665531 2
Q ss_pred ccccCCce-EEEEeceecCCCCCCCHHHHHHHhhhcC-----CeEEEE--cCCCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 216 RVSGTSIY-FESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIA--GASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 216 ~~~~~g~~-~~~~~~~~~~~~~~iD~d~le~~i~~~~-----~klIi~--~~s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+.+.|.. -..+.++.+ +.|.+++++||+.|.+.+ |-+|-+ +.+.+|..-|++.|+++|++|+.+++||+|
T Consensus 213 aAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAA 291 (510)
T KOG0629|consen 213 AAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAA 291 (510)
T ss_pred HHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecc
Confidence 33444432 133445566 578999999999886543 333332 233467777899999999999999999998
Q ss_pred ccccccccCCccCCC---CCCcEEEEcCcCcCccCc-EEEEEEeCC
Q 018300 288 HISGLVAASVVADPF---KYCDVVTTTTHKSLRGPR-GGMIFFKKD 329 (358)
Q Consensus 288 h~~Gl~~~g~~~~pl---~gaDiv~~S~hK~L~Gp~-GG~I~~~~~ 329 (358)
-.-|+......-..+ +-+|-++-+.||+++.|- -+.++++.+
T Consensus 292 wGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~ 337 (510)
T KOG0629|consen 292 WGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE 337 (510)
T ss_pred cccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH
Confidence 665454322211222 368999999999988773 455665554
No 359
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.03 E-value=0.00016 Score=73.76 Aligned_cols=196 Identities=16% Similarity=0.099 Sum_probs=101.3
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
.-+|.|.+|+.+.+.+-. +....++. .+ ...+ ..+++.+++..... ...+.+|||+|+..++... ..
T Consensus 69 h~~p~i~~Ai~~ql~~~~---~~~~~~~~-~~---~~~~-lae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t 137 (457)
T PRK05639 69 YSHPKLVKAVQEQVALIQ---HSMIGYTH-SE---RAIR-VAEKLAEISPIENP---KVLFGLSGSDAVDMAIKVSKFST 137 (457)
T ss_pred CCCHHHHHHHHHHHHhcc---ccccCccC-CH---HHHH-HHHHHHhhCCCCcC---EEEEeCchHHHHHHHHHHHHHhc
Confidence 347888888877665321 11111111 12 1222 34556677654322 2456789999999998654 23
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCC-------------ceEEEEeceecCC-----CCCCCH--------HHHH
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDES-----TGLVDY--------DMLE 244 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~-----~~~iD~--------d~le 244 (358)
...+|+...-.|.| +... .+...+ ..+..++++.... +..-|. +.++
T Consensus 138 gr~~ii~~~~~yHG-----~t~~--a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le 210 (457)
T PRK05639 138 RRPWILAFIGAYHG-----QTLG--ATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLE 210 (457)
T ss_pred CCCeEEEECCCcCC-----ccHH--HHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHH
Confidence 34577776543322 1100 011110 0122233321000 000122 2344
Q ss_pred HHhh-----hcCCeEEEEcCC--CCCCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEE
Q 018300 245 KTAI-----LFRPKLIIAGAS--AYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT 310 (358)
Q Consensus 245 ~~i~-----~~~~klIi~~~s--~~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~ 310 (358)
+.+. ..+...|++++- ..|... -++++.++|+++|+++|+|+.|+ |+.-.|.. . ..++ ..|+++
T Consensus 211 ~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~- 288 (457)
T PRK05639 211 NYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLII- 288 (457)
T ss_pred HHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEE-
Confidence 4432 124556777642 123222 28999999999999999999998 65333321 1 1123 578888
Q ss_pred cCcCcCc-cCcEEEEEEeCC
Q 018300 311 TTHKSLR-GPRGGMIFFKKD 329 (358)
Q Consensus 311 S~hK~L~-Gp~GG~I~~~~~ 329 (358)
+.|.|+ |..-|+++++++
T Consensus 289 -~gK~l~gG~pi~av~~~~~ 307 (457)
T PRK05639 289 -FGKGVASGMGLSGVIGRKE 307 (457)
T ss_pred -echhhcCCCcceeEEehHH
Confidence 469996 434477777763
No 360
>PRK06917 hypothetical protein; Provisional
Probab=97.99 E-value=0.00033 Score=71.20 Aligned_cols=202 Identities=16% Similarity=0.091 Sum_probs=106.8
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
+-+|.|.+++.+.+... ...+.. . + .++ .+....+++.+++....+ ...+.+|||+|+.+++....
T Consensus 47 h~hp~v~~Ai~~ql~~~-~~~~~~-~-~-~~~----~~~~lae~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~~ 115 (447)
T PRK06917 47 HGVKEIADAIKEQAEEV-SFVYRS-Q-F-TSE----PAEKLAKKLSDLSPGDLN---WSFFVNSGSEANETAMKIAIQHF 115 (447)
T ss_pred CCCHHHHHHHHHHHhhC-cCcccc-c-c-CCH----HHHHHHHHHHHhCCCCCC---EEEEeCChHHHHHHHHHHHHHHH
Confidence 45888888887776542 111110 1 1 122 222345667777754322 23567899999999987541
Q ss_pred ----cCC-CEEEecCCCCCcccccccccchhccccCCc------------eEEEEecee------cCCCC---CCCHHHH
Q 018300 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRL------DESTG---LVDYDML 243 (358)
Q Consensus 190 ----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~------~~~~~---~iD~d~l 243 (358)
.+| ++|+.....| ||+... .+...+. .+..++++. +.+.. .-|++.+
T Consensus 116 ~~rg~t~r~~ii~~~~~y-----HG~t~~--als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 188 (447)
T PRK06917 116 QERGIQGKHKILSRWMSY-----HGITMG--ALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATEL 188 (447)
T ss_pred HhcCCCCCCEEEEECCCc-----CCccHH--HHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHH
Confidence 133 5788776433 332110 1111110 001111110 00000 0134566
Q ss_pred HHHhhhc---CCeEEEEcCCC--CC-CCC----CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEE
Q 018300 244 EKTAILF---RPKLIIAGASA--YP-RDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (358)
Q Consensus 244 e~~i~~~---~~klIi~~~s~--~~-~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~ 310 (358)
++.++.. ++..|++++-. .+ ... -++++.++|+++|+++|+|+.|. |+.-.|... .-++ ..|++++
T Consensus 189 e~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~ 267 (447)
T PRK06917 189 ETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTL 267 (447)
T ss_pred HHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEe
Confidence 7766532 35567776532 22 222 28899999999999999999987 653233211 1122 4688766
Q ss_pred cCcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 311 S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|.|+|- +.|.+++++ ++.+.+.
T Consensus 268 --gK~l~~G~~Pi~a~~~~~------~i~~~~~ 292 (447)
T PRK06917 268 --GKGLGAGYTPIAATVVSD------RVMEPIL 292 (447)
T ss_pred --eehhccCCcceEEEEEcH------HHHHHHh
Confidence 5999652 466777776 5655554
No 361
>PRK06148 hypothetical protein; Provisional
Probab=97.99 E-value=0.00041 Score=77.24 Aligned_cols=201 Identities=17% Similarity=0.124 Sum_probs=103.9
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.|.+|+...+..-. ...+| .++ .+....+++++++....+ ...+++|||+|+..++... ...
T Consensus 639 ~hp~v~~Ai~~q~~~l~----~~~~~--~~~----~~~~lAe~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tG 705 (1013)
T PRK06148 639 AHPRVVAAAARQAARLN----TNTRY--LHD----AIVAYAERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTG 705 (1013)
T ss_pred CCHHHHHHHHHHHhhcC----CcCCc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcC
Confidence 37889988887665321 11122 122 222245567777653222 3456789999999998654 223
Q ss_pred CCEEEecCCCCCcccccccccchhccccCC------------ceEEEEece--ecCCCCCCC-------HHHHHHHhhh-
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYR--LDESTGLVD-------YDMLEKTAIL- 249 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~~~~~--~~~~~~~iD-------~d~le~~i~~- 249 (358)
..+|++.+-.|.|.-. + .+..++ ..+...+.+ ....-+..| .+.+++.++.
T Consensus 706 r~~ii~~~~~YHG~t~-~------a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 778 (1013)
T PRK06148 706 QRDAIVLDHAYHGTTT-E------LIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAM 778 (1013)
T ss_pred CCeEEEEcCCccCCCc-c------hhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhh
Confidence 4578777643333210 0 011111 001111110 000000011 1345554431
Q ss_pred ----cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEecccc-ccccccCCcc-CCCC-CCcEEEEcCcCcC
Q 018300 250 ----FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVA-DPFK-YCDVVTTTTHKSL 316 (358)
Q Consensus 250 ----~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~-~Gl~~~g~~~-~pl~-gaDiv~~S~hK~L 316 (358)
.++..|++++- +.|...+ ++++.++|+++|+++|.|+.|+ +|-.+.+.+- .-++ ..|++++ -|.|
T Consensus 779 ~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~--gK~l 856 (1013)
T PRK06148 779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTM--GKPI 856 (1013)
T ss_pred hccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeee--cccc
Confidence 23556777642 2333333 8999999999999999999986 3322211111 1122 4688866 5998
Q ss_pred cc-CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 317 RG-PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 317 ~G-p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+| ..-|.+++++ ++.+.++.
T Consensus 857 ggG~Plgav~~~~------ei~~~~~~ 877 (1013)
T PRK06148 857 GNGHPMGAVVTTR------EIADSFDN 877 (1013)
T ss_pred cCCcceEEEEEcH------HHHhhccC
Confidence 54 3457777776 56666543
No 362
>PRK07481 hypothetical protein; Provisional
Probab=97.93 E-value=0.00089 Score=68.10 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=51.7
Q ss_pred CCeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCccC--
Q 018300 251 RPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP-- 319 (358)
Q Consensus 251 ~~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~Gp-- 319 (358)
++..|++++-. .|...+ +++++++|+++|+++|.|+.++ |+.-.|.. . .-++ ..|+++++ |.|+|-
T Consensus 213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~ 289 (449)
T PRK07481 213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVT-GFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYV 289 (449)
T ss_pred cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCcCchhhHhhhcCCCCCEEEEe--ecccCCCc
Confidence 35567776532 233222 8999999999999999999987 54222321 1 1122 46888775 998652
Q ss_pred cEEEEEEeCCCCchhHHHHHHh
Q 018300 320 RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 320 ~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.-|.+++++ ++.+.++
T Consensus 290 Pi~av~~~~------~i~~~~~ 305 (449)
T PRK07481 290 PLGATMVNA------RIADAFE 305 (449)
T ss_pred CceEEEEcH------HHHHHHh
Confidence 345666666 5666554
No 363
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=97.90 E-value=0.00075 Score=68.86 Aligned_cols=194 Identities=18% Similarity=0.135 Sum_probs=102.3
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
+-+|.|.+++.+.+.. .. +...++ .++. +....++++++++...+ ...+.+||++|+.+++... ..
T Consensus 87 h~~p~v~~Ai~~ql~~-~~--~~~~~~--~~~~----~~~lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~t 154 (459)
T PRK06082 87 YGHPHVIEKVKEQMAK-LP--FSPRRF--TNET----AIECAEKLTEIAGGELN---RVLFAPGGTSAIGMALKLARHIT 154 (459)
T ss_pred CCCHHHHHHHHHHHHh-CC--CccCcc--CCHH----HHHHHHHHHHhCCCCCC---EEEECCCcHHHHHHHHHHHHHhc
Confidence 3588999998877653 22 111122 1232 22345567788753322 2456779999999998643 22
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCc------------eEEEEeceecCC--CCCCC------HHHHHHHhhhc
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES--TGLVD------YDMLEKTAILF 250 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~~~~~~~~~--~~~iD------~d~le~~i~~~ 250 (358)
...+|+...-.|.|.- .+ .+...+. .+..++.+.... ....| ++.+++.+...
T Consensus 155 gr~~ii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 227 (459)
T PRK06082 155 GNFKVVSLWDSFHGAS-LD------AISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE 227 (459)
T ss_pred CCCEEEEEeCCCcCcc-HH------HHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC
Confidence 3467877653332221 00 1111111 011122110000 00111 35577766422
Q ss_pred -CCeEEEEcCCC-CCC-CCC---HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCccC--
Q 018300 251 -RPKLIIAGASA-YPR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP-- 319 (358)
Q Consensus 251 -~~klIi~~~s~-~~~-~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~Gp-- 319 (358)
+...|++++-. .+. ..+ +++++++|+++|+++|+|+.|+ |+.-.|.. - .-++ ..|+++ +.|.|+|-
T Consensus 228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~ 304 (459)
T PRK06082 228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLV 304 (459)
T ss_pred CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEE--ecccccCCCC
Confidence 34566766421 122 334 8999999999999999999987 55323321 1 1122 468887 56999652
Q ss_pred cEEEEEEeC
Q 018300 320 RGGMIFFKK 328 (358)
Q Consensus 320 ~GG~I~~~~ 328 (358)
..|.+++++
T Consensus 305 P~~av~~~~ 313 (459)
T PRK06082 305 PIAAMITKD 313 (459)
T ss_pred cceEEEEcH
Confidence 345666665
No 364
>PRK07036 hypothetical protein; Provisional
Probab=97.90 E-value=0.0003 Score=71.84 Aligned_cols=92 Identities=21% Similarity=0.172 Sum_probs=55.7
Q ss_pred HHHHHHhhh---cCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCC-c--cCCCC-CCcE
Q 018300 241 DMLEKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-V--ADPFK-YCDV 307 (358)
Q Consensus 241 d~le~~i~~---~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~--~~pl~-gaDi 307 (358)
+.+++.+.. .++..|++++- +.|...+ ++++.++|++||+++|+|+.|+ |+.-.|. + ..-++ ..|+
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~~~~~~~gv~PDi 285 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVT-GFGRLGHFFASEAVFGIQPDI 285 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCcCchhhhhhhhcCCCCCE
Confidence 345555432 23556777653 2333333 8999999999999999999985 4322221 1 11123 4688
Q ss_pred EEEcCcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 308 v~~S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+++ .|.|+|- +-|.+++++ ++.+.+.
T Consensus 286 vt~--gK~l~gG~~Pi~av~~~~------~i~~~~~ 313 (466)
T PRK07036 286 ITF--AKGLTSGYQPLGAVIISE------RLLDVIS 313 (466)
T ss_pred EEE--ccccccCccccEEEEEcH------HHHHHHh
Confidence 866 4998652 345666666 5666554
No 365
>PRK07483 hypothetical protein; Provisional
Probab=97.89 E-value=0.00063 Score=69.06 Aligned_cols=92 Identities=22% Similarity=0.228 Sum_probs=56.6
Q ss_pred HHHHHHhhh---cCCeEEEEcCCC---CCCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcE
Q 018300 241 DMLEKTAIL---FRPKLIIAGASA---YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDV 307 (358)
Q Consensus 241 d~le~~i~~---~~~klIi~~~s~---~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDi 307 (358)
+++++.+.. .++..|++++-. .|... -++++.++|+|||+++|+|+.|. |+.-.|.+. .-++ ..|+
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDi 264 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDL 264 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhhcCCCCCe
Confidence 456665532 234567776532 13222 28999999999999999999987 542233211 1122 4688
Q ss_pred EEEcCcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 308 v~~S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+++ .|.|.|- +-|.+++++ ++.+.+.
T Consensus 265 v~~--gK~l~gG~~Pi~av~~~~------~i~~~~~ 292 (443)
T PRK07483 265 VTI--AKGLGAGYQPIGAVLASD------RIYDAIA 292 (443)
T ss_pred eee--hhhhccCccccEEEEEcH------HHHHHHh
Confidence 877 4998543 456666766 5666554
No 366
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.87 E-value=0.00055 Score=69.95 Aligned_cols=93 Identities=16% Similarity=0.163 Sum_probs=58.1
Q ss_pred HHHHHHHhhhc--CCeEEEEcC-C--CCCCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcE
Q 018300 240 YDMLEKTAILF--RPKLIIAGA-S--AYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDV 307 (358)
Q Consensus 240 ~d~le~~i~~~--~~klIi~~~-s--~~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDi 307 (358)
++.+++.+... +...|++++ . +.|... -+++++++|+++|+++|.|+.+. |+.-.|..- ..++ ..|+
T Consensus 201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~T-GfGRtG~~~a~~~~gv~PDi 279 (466)
T PRK07030 201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAV-GFGRTGTMFACEQAGIRPDF 279 (466)
T ss_pred HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCccccchHHHhcCCCCCE
Confidence 45667766532 345677775 2 223322 28999999999999999999976 442223211 1122 4689
Q ss_pred EEEcCcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 308 v~~S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
++++ |.|+|- ..|.+++++ ++.+.+.
T Consensus 280 v~~g--Kgl~gG~~Pi~av~~~~------ei~~~~~ 307 (466)
T PRK07030 280 LCLS--KALTGGYLPLAAVLTTD------TVYQAFY 307 (466)
T ss_pred Eeee--hhccCCcccceEEEecH------HHHHHHh
Confidence 8774 998543 456677776 5666553
No 367
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=97.86 E-value=0.00082 Score=65.79 Aligned_cols=200 Identities=15% Similarity=0.071 Sum_probs=98.4
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
-+|.+.+++...+.... ...+. .+ -++ ...+ ..+++.++++-..+ ...+..||++|+..++....
T Consensus 33 ~~p~i~~ai~~~~~~~~-~~~~~--~~-~~~---~~~~-la~~L~~~~p~~~~---~v~f~~sGseAve~Alkla~~~~~ 101 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKLN-YVSFS--GF-THP---EAAE-LAEKLAELFPGGLD---RVFFANSGSEAVEAALKLARQYHN 101 (339)
T ss_dssp T-HHHHHHHHHHHHHCS-SCSTT--TS-EEH---HHHH-HHHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CccccchhHHHHhhhcc-ccccc--ce-ecc---chhh-hhhhhhhccccccc---eeeeccCchHHHHHHHHHhhcccc
Confidence 46788888877654321 11111 01 122 1222 44567788843221 23556899999999986544
Q ss_pred ---c-CCCEEEecCCCCCccccccccc-----chhc-cccCCceEEEEeceecCC--CCCCCHHHHHHHh---hhcCCeE
Q 018300 190 ---K-PHDRIMGLDLPHGGHLSHGFMT-----PKRR-VSGTSIYFESMPYRLDES--TGLVDYDMLEKTA---ILFRPKL 254 (358)
Q Consensus 190 ---~-pGD~Vl~~~~~~ggh~s~~~~~-----~~~~-~~~~g~~~~~~~~~~~~~--~~~iD~d~le~~i---~~~~~kl 254 (358)
. ...+|+.....|.|.-. +... ..+. ..-....+..++++.... ...-..+++++.+ ...+...
T Consensus 102 ~~~~~~r~~il~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaa 180 (339)
T PF00202_consen 102 KRAYTGRRKILAFEGSYHGRTL-GALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAA 180 (339)
T ss_dssp HTHHHTTTEEEEETTTB-TSSH-HHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred cccccCCceEEEeeeeeeccCc-ccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 2 34688887654433211 0000 0000 000001122233221000 0000011133222 2223456
Q ss_pred EEEcCCC--CCC----CCCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc-CcEEEE
Q 018300 255 IIAGASA--YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMI 324 (358)
Q Consensus 255 Ii~~~s~--~~~----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G-p~GG~I 324 (358)
|++++-. .|. ..-+++|.++|+|+|+++|+|+.++ |+.-.|... ..++ ..|+++++ |.|.| ..-+.+
T Consensus 181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-G~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav 257 (339)
T PF00202_consen 181 VIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQT-GFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAV 257 (339)
T ss_dssp EEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTT-TTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEE
T ss_pred EEEeccccccCccccccchhhehcccccccccceecccccc-cccccCCccceecccccCcccccc--cchhhhhhcccc
Confidence 7777522 232 1227999999999999999999987 543233211 1112 46999887 99954 455777
Q ss_pred EEeC
Q 018300 325 FFKK 328 (358)
Q Consensus 325 ~~~~ 328 (358)
++++
T Consensus 258 ~~~~ 261 (339)
T PF00202_consen 258 LGSE 261 (339)
T ss_dssp EEEH
T ss_pred cccc
Confidence 7776
No 368
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=97.85 E-value=0.00085 Score=68.10 Aligned_cols=75 Identities=15% Similarity=0.165 Sum_probs=48.0
Q ss_pred CCeEEEEcCC-CC-CCC-C---CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCc
Q 018300 251 RPKLIIAGAS-AY-PRD-F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPR 320 (358)
Q Consensus 251 ~~klIi~~~s-~~-~~~-~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~ 320 (358)
+...|++.+. .. +.. . -+++++++|+++|+++|.|+.+. |+...|.+. .-++ ..|++++ .|.|+ |.+
T Consensus 206 ~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~--gK~l~~G~P 282 (442)
T TIGR00709 206 KPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA-GFGRSGTMFAFEHAGIEPDFVVM--SKAVGGGLP 282 (442)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCchhHHHHcCCCCcEEEE--cccccCCcc
Confidence 3456666542 22 222 2 28999999999999999999986 553334321 1122 4688884 69984 445
Q ss_pred EEEEEEeC
Q 018300 321 GGMIFFKK 328 (358)
Q Consensus 321 GG~I~~~~ 328 (358)
-|++++++
T Consensus 283 igav~~~~ 290 (442)
T TIGR00709 283 LAVLLIAP 290 (442)
T ss_pred cEEEEEch
Confidence 57777765
No 369
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.85 E-value=0.0008 Score=68.91 Aligned_cols=93 Identities=20% Similarity=0.159 Sum_probs=57.1
Q ss_pred HHHHHHHhhh--cCCeEEEEcCC---CCCCC-C---CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcE
Q 018300 240 YDMLEKTAIL--FRPKLIIAGAS---AYPRD-F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDV 307 (358)
Q Consensus 240 ~d~le~~i~~--~~~klIi~~~s---~~~~~-~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDi 307 (358)
++.+++.+.. .++..|++++. +.|.. . -+++++++|+++|+++|.|+.+. |+.-.|... .-++ ..|+
T Consensus 223 ~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~T-GfGRtG~~~a~e~~gv~PDi 301 (472)
T PRK08742 223 ADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIAT-GFGRTGTLFACEQAGVMPDL 301 (472)
T ss_pred HHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchHHHhcCCCCCE
Confidence 5666776642 24556777652 23332 2 28999999999999999999987 442233211 1122 4689
Q ss_pred EEEcCcCcCccC--cEEEEEEeCCCCchhHHHHHHh
Q 018300 308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 308 v~~S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
++++ |.|+|- .-|.+++++ ++.+.+.
T Consensus 302 v~~g--Kgl~gG~~Plaav~~~~------ei~~~~~ 329 (472)
T PRK08742 302 LCLS--KGLTGGFLPLSAVLATQ------QLYDAFL 329 (472)
T ss_pred EEEc--ccccCCCCCcceeeccH------HHHHHhh
Confidence 8775 998542 345566665 4555543
No 370
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=97.80 E-value=0.00013 Score=67.88 Aligned_cols=157 Identities=18% Similarity=0.159 Sum_probs=101.1
Q ss_pred eEEeCCCHH-HHHHHHHHhccCC-CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhh
Q 018300 171 NVQPLSGSP-ANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI 248 (358)
Q Consensus 171 ~V~~~SGt~-A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~ 248 (358)
++...-|+. .+.++++..+-|| ++|+..+|.++=+.. -+...+. +++.+++++ +..+|.|++.+.++
T Consensus 88 nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v--------~A~iNd~--eVvkvpl~p-dF~lnvdai~evl~ 156 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVV--------DAAINDA--EVVKVPLNP-DFSLNVDAIAEVLE 156 (375)
T ss_pred ceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEE--------EeecCCc--eEEEecCCC-CccccHHHHHHHHh
Confidence 577777875 8888899999999 889988876653321 1123344 556666776 57899999998886
Q ss_pred hc-CCeEEEEcCCCCCC--CCCHHHHHHHHHHc-CCEEEEeccccccccccCCccCCCC-CCc-EEEEcCcCcC--ccCc
Q 018300 249 LF-RPKLIIAGASAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPR 320 (358)
Q Consensus 249 ~~-~~klIi~~~s~~~~--~~dl~~I~~ia~e~-g~~livD~Ah~~Gl~~~g~~~~pl~-gaD-iv~~S~hK~L--~Gp~ 320 (358)
.. .+|++++..+++|+ .+-.+.|.++-+-- +.++++|+|+. .+.+.+....-+. +-. ++..+++|++ +|-|
T Consensus 157 ~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYi-dFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiR 235 (375)
T KOG0633|consen 157 LDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYI-DFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIR 235 (375)
T ss_pred ccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeE-eeccccccchHhHhCCceeehhhhhhhcCcceeE
Confidence 54 68999887777764 44444444444322 79999999954 4332111000111 333 5667889985 6777
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccC
Q 018300 321 GGMIFFKKDPVLGVELESAINNAVF 345 (358)
Q Consensus 321 GG~I~~~~~~~~~~~~~~~i~~~~f 345 (358)
-|+-++.. .+.+-++++--
T Consensus 236 vG~~~~~~------~ia~iln~~Ka 254 (375)
T KOG0633|consen 236 VGYGAFPL------SIAEILNRAKA 254 (375)
T ss_pred eecccccH------HHHHHHHhccC
Confidence 78888776 45555555433
No 371
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.76 E-value=0.00076 Score=68.90 Aligned_cols=198 Identities=14% Similarity=0.079 Sum_probs=100.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCCHHHHHHHHHHh--c
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTAI--L 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~-~SGt~A~~~a~~al--l 189 (358)
+-+|.|.+++...+.+..... .. .+ .++. ..+ ..+++.+++..+...-...+++ +||++|+..++... .
T Consensus 79 h~~p~v~~Ai~~ql~~~~~~~--~~-~~-~~~~---~~~-la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~ 150 (464)
T PRK06938 79 HNHPVVIEAIQQVLADELPLH--TL-DL-TTPV---KDQ-FVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTA 150 (464)
T ss_pred CCCHHHHHHHHHHHHhhhccc--cc-cc-CCHH---HHH-HHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHh
Confidence 348889999887765322111 10 11 1221 122 2344555543221000012344 69999999998754 2
Q ss_pred cCCCEEEecCCCCCcccccccccchhccccCC------------ceEEEEeceecCC--------C-CCCCHHHHHHHhh
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDES--------T-GLVDYDMLEKTAI 248 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~~~~~~~~~--------~-~~iD~d~le~~i~ 248 (358)
....+|+...-.|.|. ... .+...+ ..+..++++.+.. + ...+.+.+++.+.
T Consensus 151 tgr~~ii~~~~~yHG~-----t~~--als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~ 223 (464)
T PRK06938 151 TGRSTVLSFQGGYHGM-----SQG--ALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLD 223 (464)
T ss_pred hCCCeEEEECCccCCc-----cHH--HHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHH
Confidence 2345777765433332 100 111111 0112233322100 0 0123567777775
Q ss_pred hc-----CCeEEEEcCC--CCCCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcC
Q 018300 249 LF-----RPKLIIAGAS--AYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHK 314 (358)
Q Consensus 249 ~~-----~~klIi~~~s--~~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK 314 (358)
.. ++..|++++- ..|... -++++.++|+++|+++|.|+.++ |+.-.|... .-++ ..|+++++ |
T Consensus 224 ~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~~g--K 300 (464)
T PRK06938 224 DPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS-GFGRTGKMFAFEHAGIIPDVVVLS--K 300 (464)
T ss_pred hhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcHHHHHHhcCCCCCEEEee--c
Confidence 32 3466777642 122222 28999999999999999999976 542223211 1123 56898775 9
Q ss_pred cCcc-CcEEEEEEeC
Q 018300 315 SLRG-PRGGMIFFKK 328 (358)
Q Consensus 315 ~L~G-p~GG~I~~~~ 328 (358)
.|+| -.-|.+++++
T Consensus 301 glggG~PlsAv~~~~ 315 (464)
T PRK06938 301 AIGGSLPLAVVVYRE 315 (464)
T ss_pred cccCCCceEEEeehh
Confidence 8854 3346666665
No 372
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.69 E-value=0.0012 Score=72.10 Aligned_cols=150 Identities=20% Similarity=0.156 Sum_probs=86.8
Q ss_pred HHHHHHHHcCCCCCCCcceEEeC-CCHHHHHHHHHHh-cc--CCCEEEecCCCCCcccccccccchhccccCCceEEEEe
Q 018300 153 CQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-LK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~-SGt~A~~~a~~al-l~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~ 228 (358)
.+..++++.|.+-. |-... .+|.+-.+++++. .. +..+|++++..|..+... .. ..+...| ++++.
T Consensus 129 ~Qtmi~~LtGm~va----NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v---~~-t~~~~~g--~~i~~ 198 (954)
T PRK12566 129 FQQMTIDLTGLDLA----NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSV---LR-TRAEGFG--FELVV 198 (954)
T ss_pred HHHHHHHHhCchhh----hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHH---HH-HhhhcCC--cEEEE
Confidence 56678999999853 32223 3343333333333 22 256788876433222110 00 0112223 23332
Q ss_pred ceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCc
Q 018300 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (358)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaD 306 (358)
+++++.+.. ++-.|++.+++ +|...|+++|.+++|+.|++++ +++.- .+-+.+..|-+ |||
T Consensus 199 ------------~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d~---laL~ll~~Pge~GAD 261 (954)
T PRK12566 199 ------------DAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAADL---LSLLVLTPPGELGAD 261 (954)
T ss_pred ------------cchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeCH---HHHhCCCChhhcCCc
Confidence 333343332 45556666655 6888899999999999999866 44432 33233445666 999
Q ss_pred EEEEcCcC-----cCccCcEEEEEEeCC
Q 018300 307 VVTTTTHK-----SLRGPRGGMIFFKKD 329 (358)
Q Consensus 307 iv~~S~hK-----~L~Gp~GG~I~~~~~ 329 (358)
|++++.+- .++||..|++.++++
T Consensus 262 I~vG~~Q~fGvp~~~GGP~ag~~a~~~~ 289 (954)
T PRK12566 262 VVLGSTQRFGVPMGYGGPHAAYFACRDD 289 (954)
T ss_pred EEeeCCCcCCCCCCCCCCCeeeeeehHH
Confidence 99887653 357898999999874
No 373
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.67 E-value=0.0023 Score=61.50 Aligned_cols=191 Identities=15% Similarity=0.151 Sum_probs=103.3
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----- 188 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al----- 188 (358)
-+|.+++|+.+....-+- .++.+|. .+-....+.+.++||-+. .+..++|.+|+..++...
T Consensus 76 chpki~~aLqeq~~kLtl---ssrafYn------d~~~~f~~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wgy 141 (427)
T KOG1402|consen 76 CHPKIIKALQEQADKLTL---SSRAFYN------DVLGEFAEYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWGY 141 (427)
T ss_pred CCHHHHHHHHHHHhHhhh---hhHHHhh------hhHHHHHHHHHHhcCcce-----eeecccchhHHHHHHHHHHHHHH
Confidence 378899999877653321 1222322 122234567899999986 244568999999988543
Q ss_pred -cc--CCCE-EEecCCCCCcccccccccchhccccCCce-----EE-EEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 189 -LK--PHDR-IMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FE-SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 189 -l~--pGD~-Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~~-~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
.+ |.|+ +++... +++ ||... .++.++... |. ++|..++ .-..-|.++|+..++..+...++++
T Consensus 142 ~~K~ip~nka~il~~~---~nF-hGrT~--~ais~s~d~ds~~~fgp~~P~~~~-~v~Y~d~eale~~l~~~~vaaFivE 214 (427)
T KOG1402|consen 142 RKKNIPKNKAKILSAE---NNF-HGRTL--GAISLSTDPDSWDGFGPFLPGVVD-KVPYGDAEALEVALKSPNVAAFIVE 214 (427)
T ss_pred hhccCCccceeEEEec---ccc-cCcee--eeEEecCCcchhhccCCCCCCcce-eeccCCHHHHHHHhcCCCeeEEEee
Confidence 12 4443 333211 111 22110 122222211 00 0110000 0012366888888876555666665
Q ss_pred CCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc-CCCC--CCcEEEEcCcCcCccC--cEEEEEEe
Q 018300 259 ASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK--YCDVVTTTTHKSLRGP--RGGMIFFK 327 (358)
Q Consensus 259 ~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~-~pl~--gaDiv~~S~hK~L~Gp--~GG~I~~~ 327 (358)
+-- -|.+.| +++.+++|.+|++++|.|+.|. |+.-.|.+- ...+ .-|++.+. |.|.|. +-..++++
T Consensus 215 PIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~ 291 (427)
T KOG1402|consen 215 PIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLAD 291 (427)
T ss_pred ccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEec
Confidence 422 233222 8999999999999999999987 765555421 1122 45888765 888652 22444455
Q ss_pred C
Q 018300 328 K 328 (358)
Q Consensus 328 ~ 328 (358)
+
T Consensus 292 ~ 292 (427)
T KOG1402|consen 292 D 292 (427)
T ss_pred H
Confidence 4
No 374
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.66 E-value=0.0013 Score=66.51 Aligned_cols=83 Identities=18% Similarity=0.118 Sum_probs=51.7
Q ss_pred HHHHHHHhhh--cCCeEEEEcCC--CCCCC----CCHHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEE
Q 018300 240 YDMLEKTAIL--FRPKLIIAGAS--AYPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVV 308 (358)
Q Consensus 240 ~d~le~~i~~--~~~klIi~~~s--~~~~~----~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv 308 (358)
++++++.+.. .++..|++++- +.|.. ..+++|.++|++||+++|+|+.|+ |+...|.. . ..++ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence 4455555542 24566777642 22322 248999999999999999999998 55333321 1 1223 57888
Q ss_pred EEcCcCcCccCcEEEEEEe
Q 018300 309 TTTTHKSLRGPRGGMIFFK 327 (358)
Q Consensus 309 ~~S~hK~L~Gp~GG~I~~~ 327 (358)
+++ |.+ |-+|++..+
T Consensus 284 ~~g--K~~--~~~g~~~~~ 298 (431)
T TIGR03251 284 AFG--KKT--QVCGIMAGR 298 (431)
T ss_pred Eec--ccC--ccceEEecc
Confidence 764 765 556777554
No 375
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.65 E-value=0.0015 Score=66.72 Aligned_cols=76 Identities=17% Similarity=0.224 Sum_probs=48.9
Q ss_pred CHHHHHHHhhhc--CCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC---CC
Q 018300 239 DYDMLEKTAILF--RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK---YC 305 (358)
Q Consensus 239 D~d~le~~i~~~--~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~---ga 305 (358)
+++.+++.+..+ +...|++++- ..|...+ +++++++|+++|+++|+|+.|. |+...|.. . .-++ ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQT-GVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeee-CCCCCcchhHHHhcCCCCCC
Confidence 456677777543 3456777642 2344444 8999999999999999999985 65333321 1 1112 37
Q ss_pred cEEEEcCcCcCc
Q 018300 306 DVVTTTTHKSLR 317 (358)
Q Consensus 306 Div~~S~hK~L~ 317 (358)
|++++ .|.|.
T Consensus 316 Di~t~--gK~lg 325 (464)
T TIGR00699 316 DMVTF--SKKFQ 325 (464)
T ss_pred CEEEe--hhhhc
Confidence 88766 59884
No 376
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.65 E-value=0.00045 Score=67.18 Aligned_cols=208 Identities=13% Similarity=0.139 Sum_probs=113.2
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCC-CcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg-~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~ 182 (358)
..++-+++..+++.|++.....+.+-...|.+- .+.+.+.++...+++ +++.++++|+++.+ +.+.+...++|.+..
T Consensus 6 ~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~-a~~~lreLl~iPd~-Y~VlflqGGat~qf~ 83 (365)
T COG1932 6 VYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEE-AEKDLRELLNIPDD-YKVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHH-HHHHHHHHhCCCCC-ceEEEEcCccHHHHH
Confidence 345667788889999998887776654434321 223334455455554 67889999999874 444444456677888
Q ss_pred HHHHHhccCCCE--EEecCCCCCcccccccccchhccccCCceEEEEece-e-cCCCCCCCHHHHHHHhhhcCCeEEEE-
Q 018300 183 EVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-L-DESTGLVDYDMLEKTAILFRPKLIIA- 257 (358)
Q Consensus 183 ~a~~all~pGD~--Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~-~-~~~~~~iD~d~le~~i~~~~~klIi~- 257 (358)
++..+|+.++-. |.. |+.+.-. .+.+...+......... . ......+|+++.+ +.+ +...|.+
T Consensus 84 ~~p~nLl~~~~~~yv~~------g~Ws~~a---~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ayv~~~ 151 (365)
T COG1932 84 MAPMNLLGKRGTDYVDT------GAWSEFA---IKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAYVHFC 151 (365)
T ss_pred HHHHhhhcccCceeEee------eehhHhH---HHHHHHhcccccccccceeccCccCCCChhhcc--cCC-CccEEEEe
Confidence 888998766543 443 2222110 01111122101111100 0 1112245555443 221 2233433
Q ss_pred -cCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCch
Q 018300 258 -GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (358)
Q Consensus 258 -~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~ 333 (358)
+.+..|..++ ..-.+.. +.++++|++-. +. -.++| .-|+++++.+|.+ ||.| ++++.++
T Consensus 152 ~NeTi~Gv~v~--~~p~~~~--~~~~v~D~SS~--il-----sr~iDvsk~dviyagaQKnl-GpaGltvvIvr~----- 214 (365)
T COG1932 152 WNETISGVEVP--ELPDIGS--DGLLVADASSA--IL-----SRPIDVSKYDVIYAGAQKNL-GPAGLTVVIVRP----- 214 (365)
T ss_pred cCCcccceEcc--CCCCCCC--CceEEEecccH--Hh-----cCCCChhHcceEEEehhhcc-CccceEEEEEcH-----
Confidence 3344554433 1111111 28999999733 22 13455 7899999999997 5777 7777777
Q ss_pred hHHHHHHhhc
Q 018300 334 VELESAINNA 343 (358)
Q Consensus 334 ~~~~~~i~~~ 343 (358)
++.+++...
T Consensus 215 -~~l~r~~~~ 223 (365)
T COG1932 215 -DLLERAESY 223 (365)
T ss_pred -HHHhccccc
Confidence 566666554
No 377
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.60 E-value=0.0026 Score=64.92 Aligned_cols=74 Identities=19% Similarity=0.272 Sum_probs=45.7
Q ss_pred CeEEEEcCC--CCCCC-CC---HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc-CcE
Q 018300 252 PKLIIAGAS--AYPRD-FD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRG 321 (358)
Q Consensus 252 ~klIi~~~s--~~~~~-~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G-p~G 321 (358)
...|++++- +.|.. .+ ++++.++|+++|+++|.|+.++ |+.-.|... ..++ ..|+++++ |.|+| .+-
T Consensus 226 iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~t-GfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi 302 (459)
T PRK06931 226 PAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQA-GFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPL 302 (459)
T ss_pred eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-cCCcCchHHHhhhcCCCCCEEEec--ccccCCcce
Confidence 456777642 12322 22 8999999999999999999986 442223211 1122 46888774 99854 234
Q ss_pred EEEEEeC
Q 018300 322 GMIFFKK 328 (358)
Q Consensus 322 G~I~~~~ 328 (358)
|.++.++
T Consensus 303 ~av~~~~ 309 (459)
T PRK06931 303 AVLGIKK 309 (459)
T ss_pred eeeeeHH
Confidence 5566554
No 378
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.52 E-value=0.0022 Score=64.03 Aligned_cols=165 Identities=18% Similarity=0.110 Sum_probs=99.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCC------CCcceEEeCCCHHHHHHHHHHh-------ccCC-----------CEEEe
Q 018300 142 GNEYIDELETLCQKRALAAFNLDEN------KWGVNVQPLSGSPANFEVYTAI-------LKPH-----------DRIMG 197 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~------~~~v~V~~~SGt~A~~~a~~al-------l~pG-----------D~Vl~ 197 (358)
.++...+||...-+|+.+.++++.. ..|.-|...|++++++.++.+- ++.+ +-|+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 4566789999999999999987531 0112344567788777776542 2223 22333
Q ss_pred -cCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcC-----CeEEEEcCCCC-C-CCCCHH
Q 018300 198 -LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASAY-P-RDFDYP 269 (358)
Q Consensus 198 -~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~-----~klIi~~~s~~-~-~~~dl~ 269 (358)
+|. +|.+. . ++....+...+.++ .+. +..++.+.|++++++.. |=.|+.+.-.. . ..-+++
T Consensus 187 ~SDq---ahssv---e--ka~~i~~VklR~l~--td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~ 255 (511)
T KOG0628|consen 187 CSDQ---AHSSV---E--KACLIAGVKLRALP--TDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELE 255 (511)
T ss_pred ecCc---ccchH---H--HhHhhcceeEEEee--ccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHH
Confidence 332 23221 1 22234454444443 553 67889999998886533 22333332222 2 234599
Q ss_pred HHHHHHHHcCCEEEEeccccccccccCCcc---CCCCCCcEEEEcCcCcCc
Q 018300 270 RMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLR 317 (358)
Q Consensus 270 ~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~---~pl~gaDiv~~S~hK~L~ 317 (358)
+|..+|+++|++|++|+|++-.......+- .-++.+|-+.+..|||+.
T Consensus 256 elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~ 306 (511)
T KOG0628|consen 256 ELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLL 306 (511)
T ss_pred HhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeE
Confidence 999999999999999999662222222111 223478999999999963
No 379
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.00072 Score=65.64 Aligned_cols=196 Identities=16% Similarity=0.136 Sum_probs=111.6
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all 189 (358)
+.+.++..-..+|-. ..|.|.|+|. ...|.. .+++.||.++. +-..-|-.|-...+..++
T Consensus 56 GTgams~~qwaamm~-----GDEAYagsrs------~~~L~~----avkdifGfq~~-----iPthQGRgAE~Il~~i~i 115 (471)
T COG3033 56 GTGAMTDKQWAAMMR-----GDEAYAGSRS------YYALAD----AVKDIFGFQYT-----IPTHQGRGAENILIPILI 115 (471)
T ss_pred CcccccHHHHHHHhc-----cchhhccccc------HHHHHH----HHHHhcCceee-----eeccCCccHHHHHHHHHh
Confidence 344556666655531 2234545442 223433 46789998762 333456667666677777
Q ss_pred cCCCEEEecCC--CCCcccccccccchhccccCCceEEEEec------eec-CCCCCCCHHHHHHHhhhcCC---eEEEE
Q 018300 190 KPHDRIMGLDL--PHGGHLSHGFMTPKRRVSGTSIYFESMPY------RLD-ESTGLVDYDMLEKTAILFRP---KLIIA 257 (358)
Q Consensus 190 ~pGD~Vl~~~~--~~ggh~s~~~~~~~~~~~~~g~~~~~~~~------~~~-~~~~~iD~d~le~~i~~~~~---klIi~ 257 (358)
++|+.+...-. ..+.|+.... .-+...|..+.-++. .++ |-.|.+|+++|++++++..+ -.|++
T Consensus 116 k~~~~~pg~~~~~~sN~~FdTTr----~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~ 191 (471)
T COG3033 116 KKGEQEPGSKMVAFSNYHFDTTR----GHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVL 191 (471)
T ss_pred hhccccCCccccccccceecchh----HHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEE
Confidence 77765543110 1234544221 112233432222221 111 11368999999999976433 23433
Q ss_pred ---cCCCCCCC---CCHHHHHHHHHHcCCEEEEecccccccccc------CCccCC--------CCCCcEEEEcCcCcCc
Q 018300 258 ---GASAYPRD---FDYPRMRQIADAVGALLMMDMAHISGLVAA------SVVADP--------FKYCDVVTTTTHKSLR 317 (358)
Q Consensus 258 ---~~s~~~~~---~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~------g~~~~p--------l~gaDiv~~S~hK~L~ 317 (358)
+.+..|+. .+++++.+||++|+++++.|+|..+.-.+- +...-. +.+||-++.|.-|--.
T Consensus 192 tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~l 271 (471)
T COG3033 192 TITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGL 271 (471)
T ss_pred EEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccce
Confidence 33444543 457889999999999999999865432110 110001 1289999999999756
Q ss_pred cCcEEEEEEeCC
Q 018300 318 GPRGGMIFFKKD 329 (358)
Q Consensus 318 Gp~GG~I~~~~~ 329 (358)
.+-||+++.+++
T Consensus 272 vnmGGfl~~~D~ 283 (471)
T COG3033 272 VNMGGFLCFKDD 283 (471)
T ss_pred eccccEEEecCc
Confidence 678999999987
No 380
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.43 E-value=0.0044 Score=61.10 Aligned_cols=205 Identities=20% Similarity=0.198 Sum_probs=106.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc--
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~-- 190 (358)
...|+|.++|..-+. +..+-.-+ |+ -.+ .++ +.+.+.+..+-...+ ...+++|||+||..++..-.+
T Consensus 72 hanpev~ral~~q~~-k~~hs~~~--~~-t~e---av~--l~~~l~~~~~~~~~~--rvff~nsGTeAne~ALK~Ark~~ 140 (433)
T KOG1401|consen 72 HANPEVARALAEQAK-KLGHSSNG--YF-TLE---AVE--LEEVLSAVLGKGSAE--RVFFCNSGTEANETALKFARKFT 140 (433)
T ss_pred CCCHHHHHHHHHHHh-hheeccCc--cc-cHH---HHH--HHHHHHhcccCCCcc--EEEEecCCcHHHHHHHHHHHHhh
Confidence 447888888876543 22111000 11 112 222 344455555322211 235678999999999864321
Q ss_pred ----CCC--EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC---CCCCHHHHHHHhhhcC--CeEEEEcC
Q 018300 191 ----PHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST---GLVDYDMLEKTAILFR--PKLIIAGA 259 (358)
Q Consensus 191 ----pGD--~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~iD~d~le~~i~~~~--~klIi~~~ 259 (358)
|-+ .|+.....|.|+. -+.... ......+..+++ +.|+. ..-|..+++++++.++ ...|++++
T Consensus 141 ~~~~~~~~t~~Iaf~nsyHG~t-lgals~-~~~s~y~~~~~p----~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEP 214 (433)
T KOG1401|consen 141 GKKHPEKKTKFIAFENSYHGRT-LGALSV-TGNSKYGLPFDP----IAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEP 214 (433)
T ss_pred cccCCccceeEEEEecCcCCcc-hhHHHh-hcccccCCCCCC----CCCceeecccCCHHHHHHHHHhCCCceEEEEEec
Confidence 223 3777654333321 111000 000111111111 11111 1347899999998766 34566654
Q ss_pred CC-CCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCC--ccCCCC-CCcEEEEcCcCcCcc-CcEEEEEEeCC
Q 018300 260 SA-YPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKD 329 (358)
Q Consensus 260 s~-~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~--~~~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~~ 329 (358)
-. .|. +.| +..|+++|+++|+++|.|+.+. |+.-.|. ...-+. .-|+.+. -|.|+| ..-|+...++
T Consensus 215 iqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t-G~gR~g~~~a~e~~~~~PDI~t~--aK~L~gGlPigA~~v~~- 290 (433)
T KOG1401|consen 215 IQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT-GLGRLGYGWAQEYFGVTPDITTV--AKPLGGGLPIGATGVRD- 290 (433)
T ss_pred ccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh-CccccchHHHHHHhCcCCcceee--hhhccCCceeEEEeehH-
Confidence 22 222 223 6678899999999999999977 4432221 111122 3477654 498854 4556666666
Q ss_pred CCchhHHHHHHhhc
Q 018300 330 PVLGVELESAINNA 343 (358)
Q Consensus 330 ~~~~~~~~~~i~~~ 343 (358)
++.+.++..
T Consensus 291 -----kV~~~i~~~ 299 (433)
T KOG1401|consen 291 -----KVAEMISPG 299 (433)
T ss_pred -----HHHhhcCCC
Confidence 677777664
No 381
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.42 E-value=0.0051 Score=62.50 Aligned_cols=83 Identities=17% Similarity=0.120 Sum_probs=51.6
Q ss_pred HHHHHHHhhh--cCCeEEEEcCC--CCCCC----CCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEE
Q 018300 240 YDMLEKTAIL--FRPKLIIAGAS--AYPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVV 308 (358)
Q Consensus 240 ~d~le~~i~~--~~~klIi~~~s--~~~~~----~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv 308 (358)
++++++.+.. .++..|++++- +.|.. ..+++|+++|++||+++|.|+.|. |+.-.|... .-++ ..|++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 290 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDIV 290 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCEE
Confidence 4555666643 24567777642 22322 348999999999999999999986 542233210 1123 56888
Q ss_pred EEcCcCcCccCcEEEEEEe
Q 018300 309 TTTTHKSLRGPRGGMIFFK 327 (358)
Q Consensus 309 ~~S~hK~L~Gp~GG~I~~~ 327 (358)
++ .|.+ |-||++.++
T Consensus 291 ~~--gK~l--~~~a~l~~~ 305 (443)
T PRK08297 291 AF--GKKT--QVCGIMAGR 305 (443)
T ss_pred Ee--cccc--cccceecch
Confidence 75 5887 346666554
No 382
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=97.41 E-value=0.0036 Score=61.60 Aligned_cols=173 Identities=17% Similarity=0.134 Sum_probs=89.0
Q ss_pred CcCC-CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH--HHHHHH-HHhc----------cCCC--EEEecCC
Q 018300 137 KRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP--ANFEVY-TAIL----------KPHD--RIMGLDL 200 (358)
Q Consensus 137 ~r~~-~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~--A~~~a~-~all----------~pGD--~Vl~~~~ 200 (358)
.|.| ||.+- +-+ +|+..++++|++.+ +|+..+.|+ -++-++ .+++ ...+ +.|++.|
T Consensus 61 ~RNY~G~l~G---ipe-~r~l~a~llgv~~~----~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvP 132 (425)
T PF12897_consen 61 CRNYPGGLDG---IPE-ARELFAELLGVPPE----NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVP 132 (425)
T ss_dssp TTSS-S-SS-----HH-HHHHHHHHHTS-GG----GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES
T ss_pred ccCCCCccCC---hHH-HHHHHHHHhCCCHH----HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCC
Confidence 4778 66653 333 56668999999985 454433322 111111 1221 1122 5688887
Q ss_pred CCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhh-hcCCeEEEEcCC-CCC--CCCC---HHHHHH
Q 018300 201 PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI-LFRPKLIIAGAS-AYP--RDFD---YPRMRQ 273 (358)
Q Consensus 201 ~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~-~~~~klIi~~~s-~~~--~~~d---l~~I~~ 273 (358)
-|-.|++ ..+..|. +.++++.++ .-+|+|.+|+++. +...|-||+.+. +|| .... +++++.
T Consensus 133 GYDRHFa--------i~E~~Gi--emi~VpM~~--dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~ 200 (425)
T PF12897_consen 133 GYDRHFA--------ITEHFGI--EMIPVPMTE--DGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAA 200 (425)
T ss_dssp --HHHHH--------HHHHCT---EEEEEEEET--TEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHH
T ss_pred CchHHHH--------HHHhhCc--EEEecCCCC--CCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhc
Confidence 6665553 2244564 666766763 4689999999984 345688988542 233 3333 344444
Q ss_pred H-HHHcCCEEEEeccccccccccCC-cc---CCCC------CCc--EEEEcCcCc-CccCcEEEEEEeCC
Q 018300 274 I-ADAVGALLMMDMAHISGLVAASV-VA---DPFK------YCD--VVTTTTHKS-LRGPRGGMIFFKKD 329 (358)
Q Consensus 274 i-a~e~g~~livD~Ah~~Gl~~~g~-~~---~pl~------gaD--iv~~S~hK~-L~Gp~GG~I~~~~~ 329 (358)
+ +...+..++.|+|+++....... .. +.++ .-| +++.||+|- |+|-.-+++..+++
T Consensus 201 m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~ 270 (425)
T PF12897_consen 201 MKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEA 270 (425)
T ss_dssp S--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HH
T ss_pred CCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHH
Confidence 4 23569999999999987764321 11 2222 223 778899996 45555578887775
No 383
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.37 E-value=0.0053 Score=66.77 Aligned_cols=91 Identities=15% Similarity=0.075 Sum_probs=56.4
Q ss_pred HHHHHHhhh-------cCCeEEEEcCC--C-CCCCC-C---HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-
Q 018300 241 DMLEKTAIL-------FRPKLIIAGAS--A-YPRDF-D---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK- 303 (358)
Q Consensus 241 d~le~~i~~-------~~~klIi~~~s--~-~~~~~-d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~- 303 (358)
+.+++.++. .+...|++++- . .|... | +++++++|+++|+++|.|+.+. |+.-.|... .-++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~T-GfGRtG~~fa~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFT-GLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeeccc-CCCcccchhhHHhcCC
Confidence 456666542 23456777652 2 23322 2 7899999999999999999976 653334321 1122
Q ss_pred CCcEEEEcCcCcCccC--cEEEEEEeCCCCchhHHHHHH
Q 018300 304 YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAI 340 (358)
Q Consensus 304 gaDiv~~S~hK~L~Gp--~GG~I~~~~~~~~~~~~~~~i 340 (358)
..|+++++ |.|.|- .-|.+++++ ++.+.+
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~------~I~~~f 676 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATE------EVFEAF 676 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcH------HHHHhh
Confidence 46898776 998542 446666665 555554
No 384
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.30 E-value=0.0018 Score=62.60 Aligned_cols=158 Identities=19% Similarity=0.249 Sum_probs=100.2
Q ss_pred ceEEeCCCHHHHH--HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHh
Q 018300 170 VNVQPLSGSPANF--EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA 247 (358)
Q Consensus 170 v~V~~~SGt~A~~--~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i 247 (358)
+.+++.|||.|+- +.|.+..-|+..|.+++|..|.|.- .....|..++...| .++.+..+|++.+-+.+
T Consensus 122 ~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~~~yrY-yd~~t~gld~~g~ledl 192 (427)
T KOG1411|consen 122 VTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPVKFYRY-YDPKTRGLDFKGMLEDL 192 (427)
T ss_pred eEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc--------cccccCcceeeeee-ccccccccchHHHHHHH
Confidence 5688889987544 4455556679999999998887642 12345655544444 35567889998876666
Q ss_pred hhcCCe-EEEEc-CCCCCC-----CCCHHHHHHHHHHcCCEEEEeccccccccccCCccCC------CC-CCc-EEEEcC
Q 018300 248 ILFRPK-LIIAG-ASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP------FK-YCD-VVTTTT 312 (358)
Q Consensus 248 ~~~~~k-lIi~~-~s~~~~-----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p------l~-gaD-iv~~S~ 312 (358)
.+.... +|++. ..++|+ ...+++|.++.++.+.+-+.|+|+- |+-.+...... ++ |.+ +++.|+
T Consensus 193 ~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQ-GfaSG~~d~DA~avR~F~~~g~~~~laQSy 271 (427)
T KOG1411|consen 193 GEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQ-GFASGDLDKDAQAVRLFVEDGHEILLAQSY 271 (427)
T ss_pred hcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhc-ccccCCchhhHHHHHHHHHcCCceEeehhh
Confidence 553333 45543 334554 3348999999999999999999844 65433221111 11 444 557799
Q ss_pred cCcC--ccCcEEE--EEEeCCCCchhHHHHHHhh
Q 018300 313 HKSL--RGPRGGM--IFFKKDPVLGVELESAINN 342 (358)
Q Consensus 313 hK~L--~Gp~GG~--I~~~~~~~~~~~~~~~i~~ 342 (358)
-|.| .|-|.|. |++++. +.+.++++
T Consensus 272 AKNMGLYgERvGa~svvc~~a-----d~A~rV~S 300 (427)
T KOG1411|consen 272 AKNMGLYGERVGALSVVCKDA-----DEAKRVES 300 (427)
T ss_pred hhhcchhhhccceeEEEecCH-----HHHHHHHH
Confidence 9996 5667553 466665 56665554
No 385
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=97.20 E-value=0.0058 Score=61.69 Aligned_cols=93 Identities=22% Similarity=0.281 Sum_probs=56.0
Q ss_pred HHHHHHHhhhcCC---eEEEEcCCC---CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCc
Q 018300 240 YDMLEKTAILFRP---KLIIAGASA---YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCD 306 (358)
Q Consensus 240 ~d~le~~i~~~~~---klIi~~~s~---~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaD 306 (358)
.++|++++..+.| ..+++++-. .|...+ ++++.++|++||+++|.|+. +.|+--.|... .-.+ --|
T Consensus 200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~~FA~e~~gi~PD 278 (449)
T COG0161 200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTGKMFACEHAGIVPD 278 (449)
T ss_pred HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCchhhhhhhcCCCCC
Confidence 5678888876554 345555422 233222 89999999999999999997 44654444321 0011 347
Q ss_pred EEEEcCcCcCcc---CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 307 VVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 307 iv~~S~hK~L~G---p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+++.+ |.|.| |=++ +++++ ++.+.+..
T Consensus 279 i~~~a--KGLT~GY~Pl~a-~l~~~------~I~~~~~~ 308 (449)
T COG0161 279 ILCLA--KGLTGGYLPLSA-VLTSD------RIYEAFSD 308 (449)
T ss_pred eeeec--ccccccchhhHh-HhhhH------HHHHHHhc
Confidence 88655 98855 3334 44444 46565544
No 386
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=97.04 E-value=0.007 Score=59.46 Aligned_cols=75 Identities=19% Similarity=0.215 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--C--CcEEEEcCcCcCc-cCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y--CDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--g--aDiv~~S~hK~L~-Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+++..++|+++|.++|.|++|+ |+--.|-+ --++ + -|++ |.-|.++ |..-|.+++.+ ++++-+.+
T Consensus 235 lka~~~~v~k~Ggl~IaDEVqt-GfGRtG~~-wgfe~h~v~PDIv--TmAKgiGnG~Pl~AVvtt~------EIa~v~~~ 304 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQT-GFGRTGHM-WGFESHGVVPDIV--TMAKGIGNGFPLGAVVTTP------EIADVLNQ 304 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhhh-cccccccc-ccccccCCCccHH--HHHhhccCCCcceeeecCH------HHHHHHHh
Confidence 8999999999999999999987 54333311 1233 2 3666 6669984 44446666666 67777776
Q ss_pred cc--CCcccccc
Q 018300 343 AV--FPGLQVGF 352 (358)
Q Consensus 343 ~~--f~g~q~~~ 352 (358)
.. |...+|.|
T Consensus 305 ~~~~fnTyggnP 316 (442)
T KOG1404|consen 305 KSSHFNTYGGNP 316 (442)
T ss_pred ccccccccCCCc
Confidence 54 45555555
No 387
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.98 E-value=0.0034 Score=54.60 Aligned_cols=52 Identities=15% Similarity=0.095 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHcC--C--CCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCC
Q 018300 148 ELETLCQKRALAAFN--L--DENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHG 203 (358)
Q Consensus 148 ~lE~~~~~~la~lfg--~--~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~g 203 (358)
++.+.+.+++.+.+| . +++ +|++++|+ .|+..++.++++|||.|++++|.|.
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~pd----~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFDAD----MIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccchh----heEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 577778888988888 3 342 46666665 5999999999999999999987654
No 388
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=96.42 E-value=0.023 Score=54.22 Aligned_cols=226 Identities=17% Similarity=0.148 Sum_probs=118.1
Q ss_pred hhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHH
Q 018300 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (358)
Q Consensus 102 ~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~ 181 (358)
-++|+-++--.--+|.|.+|...-+..- ....|+ ..+++-+-++...+.+-+ ..++.+++||++||
T Consensus 50 LDCInNVaHvghchp~VV~A~~kQmat~----~tN~RF-----lhd~lv~cA~~l~stlPe-----Lsvc~F~NSGSEAN 115 (452)
T KOG1403|consen 50 LDCINNVAHVGHCHPEVVRAGAKQMATI----STNNRF-----LHDELVQCARTLTSTLPE-----LSVCFFVNSGSEAN 115 (452)
T ss_pred HHHhhhhhhcccCCHHHHHHHHHHHhHh----cccchh-----hHHHHHHHHHHHhhcCCC-----ceEEEEecCCchhh
Confidence 3788887777778999988876544321 122232 234565533322233323 33678889999999
Q ss_pred HHHHHHh--ccCCCEEEecCCCCCcccccccccchhccccC-C------ceEEEEecee----------cCC--CCCCCH
Q 018300 182 FEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT-S------IYFESMPYRL----------DES--TGLVDY 240 (358)
Q Consensus 182 ~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~-g------~~~~~~~~~~----------~~~--~~~iD~ 240 (358)
.++++.. ..+..-|++++-.|.||++... ...+..+. | .++.+.|.+- .++ .+..-.
T Consensus 116 DLALRLAR~ftkhqDvItldHAYHGHl~s~m--E~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Ya 193 (452)
T KOG1403|consen 116 DLALRLARNFTKHQDVITLDHAYHGHLQSVM--EVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYA 193 (452)
T ss_pred HHHHHHHHhhcccCceEEEechhccceeeee--eccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhh
Confidence 9998653 3344455666767788876321 10111111 1 1122222110 000 011112
Q ss_pred HHHHHHhhhc--CCe---EEEEc-C-CCCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC----CC
Q 018300 241 DMLEKTAILF--RPK---LIIAG-A-SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YC 305 (358)
Q Consensus 241 d~le~~i~~~--~~k---lIi~~-~-s~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~----ga 305 (358)
|.+++.+.+. +-. ..+.. . |-.|.+++ ++++++..+.+|-+.|.|+.|. |+.--|...-.+. --
T Consensus 194 d~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fiP 272 (452)
T KOG1403|consen 194 DPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFIP 272 (452)
T ss_pred hHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhcccc
Confidence 4555554321 111 11221 1 22344444 6788888899999999999986 4322221111122 24
Q ss_pred cEEEEcCcCcC-ccCcEEEEEEeCCCCchhHHHHHHhh---ccCCcccccc
Q 018300 306 DVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINN---AVFPGLQVGF 352 (358)
Q Consensus 306 Div~~S~hK~L-~Gp~GG~I~~~~~~~~~~~~~~~i~~---~~f~g~q~~~ 352 (358)
||++ .-|.+ .|.+.+.+.+.+ ++++.+.. ..|...-|+|
T Consensus 273 DIVt--mgKpmGNGhPVa~Vattk------eIA~Af~atgv~YFNTyGGnP 315 (452)
T KOG1403|consen 273 DIVT--MGKPMGNGHPVAAVATTK------EIAQAFHATGVEYFNTYGGNP 315 (452)
T ss_pred chhe--ecccCCCCCeeeEEeccH------HHHHHhccccceehhccCCCc
Confidence 7775 44777 466678888887 56666544 3454454554
No 389
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=96.04 E-value=0.014 Score=55.81 Aligned_cols=197 Identities=17% Similarity=0.200 Sum_probs=110.3
Q ss_pred CCcHHHHHHHhhhhhcccC----CCC-CCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHH
Q 018300 113 FTSRAVMEAVGSCLTNKYS----EGL-PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~----~G~-pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~a 187 (358)
.+|..+...+...+ ++|+ +|. .|. .+++. ..+-+-..++.+.|+...++. ..+|=|.-++..+.+
T Consensus 78 LmPK~t~~~~~~eL-DkWak~av~gH~~Gk-----vPW~~-~De~il~l~~~iVGA~e~Eva---vmNsLTvNlh~Ll~s 147 (465)
T KOG3846|consen 78 LMPKSTRNSINAEL-DKWAKCAVEGHFKGK-----VPWVS-IDEPILPLLAPIVGAQENEVA---VMNSLTVNLHSLLIS 147 (465)
T ss_pred cCchhhHhHHHHHH-HHHHhhhhhcccccc-----cceee-cchhhhhhhhhhccCCchhhh---hHhhhhhHHHHHHHH
Confidence 45777777776554 3442 221 122 12221 112234457889999876431 134444445555567
Q ss_pred hccCCC---EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC--CCCHHHHHHHhhhcCC--eEEEEcCC
Q 018300 188 ILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG--LVDYDMLEKTAILFRP--KLIIAGAS 260 (358)
Q Consensus 188 ll~pGD---~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~iD~d~le~~i~~~~~--klIi~~~s 260 (358)
+.+|-. +|+. +.++.++-.|... ..+.+.|+..+-...-+.|..| .+..+++-+.|+...- .+|.++..
T Consensus 148 FyKPTekR~KILl---E~kaFPSDhYAie-sQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGv 223 (465)
T KOG3846|consen 148 FYKPTEKRFKILL---EKKAFPSDHYAIE-SQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGV 223 (465)
T ss_pred hcCCcchhhhhhh---ccCCCCchHHHHH-hhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecc
Confidence 777754 4553 3344444322111 1233445433322222333333 5777888777765432 34544433
Q ss_pred C--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC-C-CCcEEEEcCcCcC-ccCcE-EEEEEeC
Q 018300 261 A--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTTTHKSL-RGPRG-GMIFFKK 328 (358)
Q Consensus 261 ~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl-~-gaDiv~~S~hK~L-~Gp~G-G~I~~~~ 328 (358)
. +|+-.|+.+|...-+..|+++=.|-||++|-+ |.-+ + |+|+.+-...|++ .|+.| |.++..+
T Consensus 224 qyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNV-----pL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHe 292 (465)
T KOG3846|consen 224 QYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNV-----PLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHE 292 (465)
T ss_pred eeecccccchhhhhhcccCCCcEechhhhhhhcCC-----ceEEeecCCceEEEeeecccccCCCccceeeeeh
Confidence 2 47789999999766777999999999998854 2112 2 8999999999998 45544 4445444
No 390
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=95.38 E-value=0.095 Score=50.38 Aligned_cols=142 Identities=18% Similarity=0.222 Sum_probs=86.4
Q ss_pred eEEeCCCHHHHHHHHHHh--ccCCCEEEecCCCCCcccccccccchhccccCC-ceEEEEeceecCCCCCCCHHHHHHHh
Q 018300 171 NVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-IYFESMPYRLDESTGLVDYDMLEKTA 247 (358)
Q Consensus 171 ~V~~~SGt~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~iD~d~le~~i 247 (358)
.|+..|||.|+.....=+ +-+...|.+++|..+.|-.. .+..| ..+...+| .+.++..+|++.+...+
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~i--------f~~aGf~tv~~Y~y-Wd~~~k~~d~e~~Lsdl 172 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAI--------FEKAGFTTVATYPY-WDAENKCVDLEGFLSDL 172 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHH--------HHHcCCceeeeeee-ecCCCceecHHHHHHHH
Confidence 478899999888764322 33455688888877766321 12233 12233333 34456689999988877
Q ss_pred hhcCCe-EEEEc-CCCCCCCCC-----HHHHHHHHHHcCCEEEEeccccccccccCCccCC------CC-CCc-EEEEcC
Q 018300 248 ILFRPK-LIIAG-ASAYPRDFD-----YPRMRQIADAVGALLMMDMAHISGLVAASVVADP------FK-YCD-VVTTTT 312 (358)
Q Consensus 248 ~~~~~k-lIi~~-~s~~~~~~d-----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p------l~-gaD-iv~~S~ 312 (358)
+.-..+ ++++. ...+|+-.| +..|++..++.+...+.|.|+- |+..++.-... ++ |.. +++.|+
T Consensus 173 ~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQ-GfASGD~~~DawAiR~fV~~g~e~fv~QSF 251 (410)
T KOG1412|consen 173 ESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQ-GFASGDLDADAWAIRYFVEQGFELFVCQSF 251 (410)
T ss_pred hhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhc-ccccCCccccHHHHHHHHhcCCeEEEEhhh
Confidence 653334 34443 234555333 7788888889999999999854 65433211111 11 332 778899
Q ss_pred cCcC--ccCcEE
Q 018300 313 HKSL--RGPRGG 322 (358)
Q Consensus 313 hK~L--~Gp~GG 322 (358)
.|.| .++|-|
T Consensus 252 aKNfGlYneRvG 263 (410)
T KOG1412|consen 252 AKNFGLYNERVG 263 (410)
T ss_pred hhhccccccccc
Confidence 9996 678865
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=94.16 E-value=0.087 Score=55.02 Aligned_cols=150 Identities=14% Similarity=0.145 Sum_probs=85.2
Q ss_pred HHHHHHHcCCCCCCCcceE-EeCCCHHHHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 154 QKRALAAFNLDENKWGVNV-QPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 154 ~~~la~lfg~~~~~~~v~V-~~~SGt~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
+..++++.|++-+ |. +.--||.|-.++.++. ..++.++++....|.-.++.. .....+..+++
T Consensus 169 QTmi~dlTGL~~a----NASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~------~TRa~~~~i~v----- 233 (1001)
T KOG2040|consen 169 QTMITDLTGLPMA----NASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVV------KTRAKGFGIKV----- 233 (1001)
T ss_pred HHhhhhccCCccc----chhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhh------hccccccceeE-----
Confidence 4556788888753 22 2346887666665555 566777776554333222210 00111111111
Q ss_pred cCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEE
Q 018300 232 DESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVT 309 (358)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~ 309 (358)
...|..+.....+ ...-|++.++. .|.+.|++++++.+++.|..+++-. .+.+--.+-.|-+ |+||++
T Consensus 234 ----~~~~~~~~~~s~~--~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~at----DLLaLtiLrpPgefGaDIav 303 (1001)
T KOG2040|consen 234 ----VVSDIKEADYSSK--DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMAT----DLLALTILRPPGEFGADIAV 303 (1001)
T ss_pred ----EecCHHHhhcccc--ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEee----hhhHHHccCChhhcCceeee
Confidence 1233333322221 34456666665 5789999999999999998876632 2332212223445 999999
Q ss_pred EcCcCc-----CccCcEEEEEEeC
Q 018300 310 TTTHKS-----LRGPRGGMIFFKK 328 (358)
Q Consensus 310 ~S~hK~-----L~Gp~GG~I~~~~ 328 (358)
+|.+.. ++||..||..+++
T Consensus 304 GSsQRFGVPlGYGGPHAaFfAv~~ 327 (1001)
T KOG2040|consen 304 GSSQRFGVPLGYGGPHAAFFAVSE 327 (1001)
T ss_pred ccccccCccccCCCchHHHHHHHH
Confidence 999974 3677777776654
No 392
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=93.86 E-value=0.036 Score=54.04 Aligned_cols=71 Identities=24% Similarity=0.285 Sum_probs=45.9
Q ss_pred HHHHHHHhhhcC----C-eEEEEcC--C----CCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCc-c---CCCC-
Q 018300 240 YDMLEKTAILFR----P-KLIIAGA--S----AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A---DPFK- 303 (358)
Q Consensus 240 ~d~le~~i~~~~----~-klIi~~~--s----~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~---~pl~- 303 (358)
++++|++|..++ | ..|++++ + +.....-+.++.+|+++||+.+++|+.|.-| ...|.+ . -.++
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGg-GaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGG-GATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCC-CccCceeeehhcCCCC
Confidence 467777776543 2 3456653 2 2223344899999999999999999999844 334431 1 1233
Q ss_pred CCcEEEEc
Q 018300 304 YCDVVTTT 311 (358)
Q Consensus 304 gaDiv~~S 311 (358)
-.|+|+||
T Consensus 334 PpD~vTFS 341 (484)
T KOG1405|consen 334 PPDVVTFS 341 (484)
T ss_pred Cccceehh
Confidence 57899877
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=92.91 E-value=1.1 Score=42.70 Aligned_cols=201 Identities=17% Similarity=0.238 Sum_probs=105.7
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCC-CcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHH
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg-~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~ 181 (358)
.-+++-|++..+|..|+..+.+.+.|-..-|..- .-...+.++...++. +...++++++.... ..+...-.+||...
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~-tes~lreLlniPdn-~~vlf~QGGGt~qF 84 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIIND-TESLLRELLNIPDN-YKVLFLQGGGTGQF 84 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHH-HHHHHHHHHcCCCc-eeEEEEeCCCcccc
Confidence 4456778888899999999888887755434211 111223344444443 55667889999874 32333334677666
Q ss_pred HHHHHHhc--cCC---CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC--CCCCHHHHHHHhhhcCCeE
Q 018300 182 FEVYTAIL--KPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKL 254 (358)
Q Consensus 182 ~~a~~all--~pG---D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~iD~d~le~~i~~~~~kl 254 (358)
.++...|. +-| |-|++ |..+- .+.+.+...+- ...+..+..+.+ ..+|.+.++.. .+.+.
T Consensus 85 aAv~lNL~glK~g~~AdYiVT------GsWS~---KA~~EAkk~~~-~~~V~~~~k~y~ygkvPd~~~w~~~---~da~y 151 (370)
T KOG2790|consen 85 AAVPLNLIGLKHGRCADYVVT------GSWSA---KAAEEAKKYGT-PNIVIPKLKSYTYGKVPDPSTWELN---PDASY 151 (370)
T ss_pred cccchhhhccccCCccceEEe------ccccH---HHHHHHHhhCC-ceEEeccccccccCcCCChhhcccC---CCccE
Confidence 66666663 555 34443 21110 00011111121 112222222222 34566555432 13345
Q ss_pred EEE--cCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 255 IIA--GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 255 Ii~--~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
++. +.+.-|..+|.-. .-.-.|+++++|++ +.+. ..|+| ..++++...+|.+ ||.| -+++.+++
T Consensus 152 vyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmS--Snfl-----SrpvDvsk~gvi~aGAQKN~-G~aG~Tvvivr~d 220 (370)
T KOG2790|consen 152 VYYCANETVHGVEFDFIP---VNDPKGAVLVADMS--SNFL-----SRPVDVSKFGVIFAGAQKNV-GPAGVTVVIVRKD 220 (370)
T ss_pred EEEecCceeeceecCCCC---CCCCCCceEEEecc--cchh-----cCCccchhcceEEecccccc-CccccEEEEEehh
Confidence 543 2232343332111 22346999999996 2333 24555 6678889999985 6766 56666775
No 394
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=90.75 E-value=0.51 Score=46.14 Aligned_cols=157 Identities=15% Similarity=0.085 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHcCCC-CCCCcceEEeCCCH-HHHHHHHHHhccC---CC---EEEecCCCCCcccccccccchhccc
Q 018300 147 DELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-PANFEVYTAILKP---HD---RIMGLDLPHGGHLSHGFMTPKRRVS 218 (358)
Q Consensus 147 ~~lE~~~~~~la~lfg~~-~~~~~v~V~~~SGt-~A~~~a~~all~p---GD---~Vl~~~~~~ggh~s~~~~~~~~~~~ 218 (358)
.+||+.+|+ +-++.|-- .++ -.|.+.+|+ +.+++++.+|... .+ .|+...|-|..+.. ++. -
T Consensus 46 ~eL~~~Ir~-LH~~VGNAvt~g--r~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~---qt~----~ 115 (363)
T PF04864_consen 46 PELERQIRR-LHRVVGNAVTDG--RYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPE---QTD----F 115 (363)
T ss_dssp HHHHHHHHH-HHHHH-SB--TT--SEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHH---HCC----C
T ss_pred HHHHHHHHH-HHHHhccccccC--cEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHH---HHH----h
Confidence 467776544 55566632 222 245666665 5888888887432 11 56766654443322 111 0
Q ss_pred cCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEE-EEcCCCCCCCCCHHHHHH-HHHHcCCEEEEeccccccccccC
Q 018300 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASAYPRDFDYPRMRQ-IADAVGALLMMDMAHISGLVAAS 296 (358)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klI-i~~~s~~~~~~dl~~I~~-ia~e~g~~livD~Ah~~Gl~~~g 296 (358)
+.+..+++.- |..... + .......| ++..||||-- .|.+ +.+.-+..+|.|-|++--..
T Consensus 116 f~s~~y~w~G---da~~~~-~--------~~~~~~~IElVTSPNNPDG----~lr~~V~~g~~~k~I~D~AYYWPhy--- 176 (363)
T PF04864_consen 116 FDSRLYKWAG---DASNFK-N--------SDNPSPYIELVTSPNNPDG----QLREAVLNGSSGKVIHDLAYYWPHY--- 176 (363)
T ss_dssp T-BTTEEEEE---ECCCGT-T---------S-CCGEEEEEESS-TTT----------SSTTTEEEEEEE-TT-STTT---
T ss_pred ccccCccccc---cHHhhc-c--------CCCCCCeEEEEeCCCCCcc----cccchhcCCCCcceeeeeeeecccc---
Confidence 1122233221 111110 0 00122344 4456777631 1222 33555778899998663221
Q ss_pred CccCCCC---CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHh
Q 018300 297 VVADPFK---YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 297 ~~~~pl~---gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.|+. .-|++.||++|. .|.- -|+.+.+++ ++.+++.
T Consensus 177 ---TpI~~~aD~DiMLFT~SK~-TGHAGSR~GWAlVKD~-----~Va~kM~ 218 (363)
T PF04864_consen 177 ---TPITAPADHDIMLFTLSKL-TGHAGSRFGWALVKDE-----EVAKKMT 218 (363)
T ss_dssp ---S---S-B--SEEEEEHHHH-CS-GGG-EEEEEES-H-----HHHHHHH
T ss_pred ---cccCCCCCCceEEEEEecc-cCccccccceeeecCH-----HHHHHHH
Confidence 3333 458999999994 5554 499999987 6666654
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=85.28 E-value=0.56 Score=44.28 Aligned_cols=104 Identities=21% Similarity=0.286 Sum_probs=67.9
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCC--C-C-CCCC-CHHHHHHHHHHcCCEEEEeccccccccccCCc---c--CCCCCCc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGAS--A-Y-PRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVV---A--DPFKYCD 306 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s--~-~-~~~~-dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~---~--~pl~gaD 306 (358)
.-|++.+++.+++..+..|++-++ + + |+.. .+++|..||..|+++-++.+|+. +-..... . .....+|
T Consensus 140 ~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayg--lqsee~i~~iaa~~~~grid 217 (432)
T KOG3843|consen 140 ITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYG--LQSEECIHKIAAAAECGRID 217 (432)
T ss_pred HHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccc--cchHHHHHHHHHHhhhccHH
Confidence 568899999888767775544322 2 2 4544 49999999999999999999854 2211100 0 0111468
Q ss_pred EEEEcCcCcCccCcEEEEEEe-CCCCchhHHHHHHhhccCCcc
Q 018300 307 VVTTTTHKSLRGPRGGMIFFK-KDPVLGVELESAINNAVFPGL 348 (358)
Q Consensus 307 iv~~S~hK~L~Gp~GG~I~~~-~~~~~~~~~~~~i~~~~f~g~ 348 (358)
.++.|+.|.|.-|-||.|+.. ++ .+.+.|... +||-
T Consensus 218 a~vqsldknf~vpvggaiia~fk~-----n~iq~iak~-ypgr 254 (432)
T KOG3843|consen 218 AFVQSLDKNFMVPVGGAIIAAFKD-----NFIQEIAKM-YPGR 254 (432)
T ss_pred HHHHHhhhcceeecchhHhhHhHH-----HHHHHHHHh-CCCc
Confidence 999999999999988876642 22 444555443 4543
No 396
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=82.59 E-value=2.8 Score=37.71 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=47.8
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKS 315 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~ 315 (358)
.+.+++++++++. ...+|.++.+.-++...++++.+-.|+.+.++|.|++-.-... ...+ |+|++.++++-+
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~------~A~~~G~D~I~TTLsGY 123 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAI------NAAELGFDIIGTTLSGY 123 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHH------HHHHTT-SEEE-TTTTS
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHH------HHHHcCCCEEEcccccC
Confidence 4567899988764 6889999988877778899999989998899999997332111 1112 899999886654
No 397
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=78.59 E-value=5.4 Score=36.37 Aligned_cols=71 Identities=20% Similarity=0.188 Sum_probs=50.9
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCCC-CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCc
Q 018300 238 VDYDMLEKTAILFRPKLIIAGASAYPRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKS 315 (358)
Q Consensus 238 iD~d~le~~i~~~~~klIi~~~s~~~~~~-dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~ 315 (358)
..+++++++++. ...+|.++.+.-.+.. ++++|.+..|..|.++|.|++-.-. +. +... |+|++-++++-+
T Consensus 86 ptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee----~l--~a~~~G~D~IGTTLsGY 158 (229)
T COG3010 86 PTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEE----GL--NAHKLGFDIIGTTLSGY 158 (229)
T ss_pred ccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHH----HH--HHHHcCCcEEecccccc
Confidence 346788887654 6788888887766655 8999999988899999999973211 11 1112 899998886653
No 398
>TIGR03586 PseI pseudaminic acid synthase.
Probab=62.12 E-value=16 Score=35.68 Aligned_cols=88 Identities=18% Similarity=0.274 Sum_probs=56.3
Q ss_pred CCCCCHHHHHHHhhh----cCCeEEEEc-CCCCCC---CCCHHHHHHHHHHcCCEE-EEeccccccccccCCccCCCC-C
Q 018300 235 TGLVDYDMLEKTAIL----FRPKLIIAG-ASAYPR---DFDYPRMRQIADAVGALL-MMDMAHISGLVAASVVADPFK-Y 304 (358)
Q Consensus 235 ~~~iD~d~le~~i~~----~~~klIi~~-~s~~~~---~~dl~~I~~ia~e~g~~l-ivD~Ah~~Gl~~~g~~~~pl~-g 304 (358)
+|.-++++++..++- ...++++++ .++||. ..|+..|..+.++++.++ ++| |..|.... .-.+. |
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~~~~---~aAva~G 215 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGILAP---VAAVALG 215 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCchHHH---HHHHHcC
Confidence 454566666655432 234677654 355664 578999999999999999 888 88775311 01122 8
Q ss_pred CcEE--EEcCcCcCccCcEEEEEEe
Q 018300 305 CDVV--TTTTHKSLRGPRGGMIFFK 327 (358)
Q Consensus 305 aDiv--~~S~hK~L~Gp~GG~I~~~ 327 (358)
|+++ -++..|++.||-.-.=+..
T Consensus 216 A~iIEkH~tld~~l~G~D~~~Sl~p 240 (327)
T TIGR03586 216 ACVIEKHFTLDRSDGGVDSAFSLEP 240 (327)
T ss_pred CCEEEeCCChhhcCCCCChhccCCH
Confidence 8866 4677898888866433333
No 399
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=61.93 E-value=19 Score=35.65 Aligned_cols=59 Identities=19% Similarity=0.271 Sum_probs=42.8
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEEcC-----C-CCC-CCCCHHHHHHHHHHcCCEEEEecccccccc
Q 018300 235 TGL-VDYDMLEKTAIL----FRPKLIIAGA-----S-AYP-RDFDYPRMRQIADAVGALLMMDMAHISGLV 293 (358)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~~klIi~~~-----s-~~~-~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~ 293 (358)
+|. .+++++...++. ...++++++. . .|+ ...|+..|..+.+..+.++++|.+|+.|..
T Consensus 215 ~G~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 215 RGMAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKS 285 (352)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcH
Confidence 454 477777655432 2457887754 2 355 468999999998888999999999998854
No 400
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=60.95 E-value=22 Score=35.25 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=59.1
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEEc--CCCCCC----CCCHHHHHHHHHHcCCEEEEecccccc---ccccCCccC
Q 018300 235 TGL-VDYDMLEKTAIL----FRPKLIIAG--ASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG---LVAASVVAD 300 (358)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~~klIi~~--~s~~~~----~~dl~~I~~ia~e~g~~livD~Ah~~G---l~~~g~~~~ 300 (358)
+|. .++++++..++. ...+++++. .+.|+. ..|+..|..+.++++.++++|..|+.| ++.. ....
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~r~~~~~-~a~a 310 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGRRDLLLP-TAKA 310 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcchhhHHH-HHHH
Confidence 564 688887766532 235788874 345552 478999999999999999999999987 3210 0000
Q ss_pred CCC-CCc--EEEEcCcCcCccCcEEEEEEeC
Q 018300 301 PFK-YCD--VVTTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 301 pl~-gaD--iv~~S~hK~L~Gp~GG~I~~~~ 328 (358)
.+. ||| ++=.-+.|...|+-+..-+..+
T Consensus 311 Ava~GAdg~~iE~H~dp~~a~~D~~~sl~p~ 341 (360)
T PRK12595 311 ALAIGADGVMAEVHPDPAVALSDSAQQMDIP 341 (360)
T ss_pred HHHcCCCeEEEEecCCCCCCCCchhhhCCHH
Confidence 122 887 3334446777777665444443
No 401
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=59.06 E-value=21 Score=33.66 Aligned_cols=57 Identities=12% Similarity=0.241 Sum_probs=42.1
Q ss_pred CCC-CCHHHHHHHhhhc----CCeEEEEc--CCCC-CC---CCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 235 TGL-VDYDMLEKTAILF----RPKLIIAG--ASAY-PR---DFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 235 ~~~-iD~d~le~~i~~~----~~klIi~~--~s~~-~~---~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
++. .++++++..++.. ..+++++. .+.| |. ..|+..|..+.++++.++++|..|+.|
T Consensus 139 ~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 139 RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 554 3788877665432 34677764 4456 53 678999999998899999999999977
No 402
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=56.42 E-value=22 Score=29.17 Aligned_cols=49 Identities=14% Similarity=0.065 Sum_probs=39.1
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEe
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD 285 (358)
..++++++++.+.. +|..|+++.-.+|...=.++..+++++.++-+++-
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 47999999999875 89889988777776555678889999988777653
No 403
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=54.87 E-value=46 Score=26.37 Aligned_cols=66 Identities=11% Similarity=0.240 Sum_probs=38.6
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCc--CcCcc-CcEEEEEEeCCCCchhHHHHHHh
Q 018300 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 269 ~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~h--K~L~G-p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.++-++++++|+..-+|.++. +.. ....+++|+++.|.| +.|.. |. |.++.-...+...++.++|.
T Consensus 20 ~kve~~l~~~gi~~~~~~~~v-~~~-----~~~~~~aDiiv~s~~l~~~~~~~~~-~~v~~~~~~~d~~ei~~~l~ 88 (93)
T COG3414 20 MKVEEVLKELGIDVDVEQCAV-DEI-----KALTDGADIIVTSTKLADEFEDIPK-GYVVITGNGMDIEEIKQKLL 88 (93)
T ss_pred HHHHHHHHHcCCCceeeeEEe-ccc-----ccCCCcccEEEEehHhhhhcCcCCC-ceEEEEcccCCHHHHHHHHH
Confidence 467789999999855555543 221 222348999999987 55633 44 55554443222235555553
No 404
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=53.40 E-value=39 Score=34.05 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=27.2
Q ss_pred CCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 251 RPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 251 ~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
..+.++++--+-|...+.+.+.++|++.|+++++|-
T Consensus 143 ~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 143 SFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred cCCEEEEeccccccchhHHHHHHHHHHcCCcEEECC
Confidence 346676642233556679999999999999999996
No 405
>smart00642 Aamy Alpha-amylase domain.
Probab=50.59 E-value=12 Score=32.64 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=23.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++-||++|+.|+.|..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 445667899999999999999999984
No 406
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=49.85 E-value=2.3e+02 Score=27.40 Aligned_cols=122 Identities=15% Similarity=0.154 Sum_probs=65.4
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCC--EEEecC--CCCCcccccccccchhccc
Q 018300 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD--RIMGLD--LPHGGHLSHGFMTPKRRVS 218 (358)
Q Consensus 143 ~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD--~Vl~~~--~~~ggh~s~~~~~~~~~~~ 218 (358)
.++++.+++ +++++++. |.+.-.-+-.|.+.+-|.+...++....+.|. +|++.+ |.+.||.. .+.+.
T Consensus 96 ~~~i~~~~~-a~~~ia~~-~a~~i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~------ak~L~ 167 (301)
T COG1184 96 QEFIDRVEK-AKERIAEI-GAERIHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIM------AKELR 167 (301)
T ss_pred HHHHHHHHH-HHHHHHHH-HHhhccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHH------HHHHH
Confidence 344555554 45555443 32210001246667777788888877777776 666654 33334321 13444
Q ss_pred cCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC---CCCC---CCHHHHHHHHHHcCCEEEEe
Q 018300 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA---YPRD---FDYPRMRQIADAVGALLMMD 285 (358)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~---~~~~---~dl~~I~~ia~e~g~~livD 285 (358)
..|..+.++. | .++...+. +.+.|++|... +|.. .---.|+..||+.+.++++=
T Consensus 168 ~~gI~~~~I~---D--------sa~~~~~~--~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 168 QSGIPVTVIV---D--------SAVGAFMS--RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred HcCCceEEEe---c--------hHHHHHHH--hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 5564333332 2 22333332 56677777543 3332 23456888999999998874
No 407
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=48.25 E-value=67 Score=31.22 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=36.4
Q ss_pred CCCCCHHHHHHHhhhc-----CCeEEEEcCCCC-CC-CCCHHHHHHHHHHcCCEEEEecccc
Q 018300 235 TGLVDYDMLEKTAILF-----RPKLIIAGASAY-PR-DFDYPRMRQIADAVGALLMMDMAHI 289 (358)
Q Consensus 235 ~~~iD~d~le~~i~~~-----~~klIi~~~s~~-~~-~~dl~~I~~ia~e~g~~livD~Ah~ 289 (358)
.-.++.++++..++.. +-++|++..|.= +. .-.+.+|.++|++.|+.+++|.+..
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 3467777776654322 235666654332 22 2348999999999999999999754
No 408
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=47.37 E-value=26 Score=28.09 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=37.7
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHc--CCEEEEecccc
Q 018300 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHI 289 (358)
Q Consensus 238 iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~--g~~livD~Ah~ 289 (358)
.+.+++.+.+.+.+|++|.++.+..+......++.+..|+. ++++++=+.|.
T Consensus 38 ~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 38 VPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp B-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 45588888888789999988754444444567777777776 78999988765
No 409
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=47.04 E-value=50 Score=30.28 Aligned_cols=88 Identities=23% Similarity=0.261 Sum_probs=54.4
Q ss_pred HHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC
Q 018300 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (358)
Q Consensus 157 la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (358)
++.+++++.. ..|-...||.++ +++++|+.+.+.|-.-||| |- .+.+.| +.
T Consensus 133 aa~vL~l~dg---~VVDiGGGTTGI-----si~kkGkViy~ADEpTGGt--Hm------tLvlAG-------------~y 183 (277)
T COG4820 133 AADVLQLDDG---GVVDIGGGTTGI-----SIVKKGKVIYSADEPTGGT--HM------TLVLAG-------------NY 183 (277)
T ss_pred HHHHhccCCC---cEEEeCCCccee-----EEEEcCcEEEeccCCCCce--eE------EEEEec-------------cc
Confidence 4678888875 456677888776 5689999999888666765 31 111222 34
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCC-HHHHHHHHHHc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFD-YPRMRQIADAV 278 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~d-l~~I~~ia~e~ 278 (358)
.|++++.|+.-+.++ | +.-.++..-| ++++++|.++|
T Consensus 184 gi~~EeAE~~Kr~~k-~----~~Eif~~v~PV~eKMAeIv~~h 221 (277)
T COG4820 184 GISLEEAEQYKRGHK-K----GEEIFPVVKPVYEKMAEIVARH 221 (277)
T ss_pred CcCHhHHHHhhhccc-c----chhcccchhHHHHHHHHHHHHH
Confidence 677887776532221 1 1112333333 78899998886
No 410
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=46.88 E-value=58 Score=27.54 Aligned_cols=57 Identities=16% Similarity=0.166 Sum_probs=40.1
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHc---CCEEEE
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV---GALLMM 284 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~---g~~liv 284 (358)
.+++++++. .+.++++.+.+.+.+|++|.++.........++++.+..++. ++.+++
T Consensus 31 G~eVi~LG~-----~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~v 90 (137)
T PRK02261 31 GFEVINLGV-----MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYV 90 (137)
T ss_pred CCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEE
Confidence 356666543 356788888887788999988766666666778888888877 444444
No 411
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=46.78 E-value=44 Score=26.95 Aligned_cols=51 Identities=10% Similarity=-0.106 Sum_probs=36.2
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcC---CEEEEecc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG---ALLMMDMA 287 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g---~~livD~A 287 (358)
....+++.+.+.+.+|++|.++.+......++.++.+..++.+ +.+++=+.
T Consensus 36 ~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~ 89 (119)
T cd02067 36 DVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGA 89 (119)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 3566788777777899999887765555667788888888763 44555443
No 412
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=46.48 E-value=1.1e+02 Score=27.15 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=39.3
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
.+.++.+.+++..-+--+|+++.-......-.+++.+++++.+++++.=.--.-+++..|..
T Consensus 21 ~~~p~~aa~lI~~AKrPlIivG~ga~~~~ea~e~l~elaEkl~iPVvtT~~~~~~~~~kgv~ 82 (171)
T PRK00945 21 IVSPKIAAMMIKKAKRPLLVVGSLLLDDEELLDRAVKIAKKANIPVAATGGSYKGLIDKGVD 82 (171)
T ss_pred ccCHHHHHHHHHhCCCcEEEECcCccccchHHHHHHHHHHHHCCCEEEccccccccccCCcc
Confidence 56778888877643323677764332212347789999999999999765434444444443
No 413
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=46.03 E-value=11 Score=35.16 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=23.8
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++.||++|+.||.|..
T Consensus 46 ~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 46 PRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccchhhhhhhhhhccccccceEEEeee
Confidence 3456667899999999999999999985
No 414
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.92 E-value=34 Score=32.47 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=39.5
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEEc-----CCCCCC-CCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 235 TGL-VDYDMLEKTAIL----FRPKLIIAG-----ASAYPR-DFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~~klIi~~-----~s~~~~-~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
++. .+++++...++. ..++++++. .++|+. ..|+..|..+.+..+.+|++|.+|+.|
T Consensus 141 ~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 141 RGMSATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 453 477777655432 245676664 245653 567888888888889999999999987
No 415
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=45.62 E-value=65 Score=26.54 Aligned_cols=50 Identities=12% Similarity=0.013 Sum_probs=37.9
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.++.+++++++.. .|.+|+++.-..+....-.++.+..++.|+-+.+-.+
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcCh
Confidence 6789999998864 7999999866565534446777788889999887544
No 416
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=44.24 E-value=57 Score=30.68 Aligned_cols=58 Identities=14% Similarity=0.235 Sum_probs=42.3
Q ss_pred CC-CCCHHHHHHHhhh----cCCeEEEEc--CCCCCC----CCCHHHHHHHHHHcCCEEEEeccccccc
Q 018300 235 TG-LVDYDMLEKTAIL----FRPKLIIAG--ASAYPR----DFDYPRMRQIADAVGALLMMDMAHISGL 292 (358)
Q Consensus 235 ~~-~iD~d~le~~i~~----~~~klIi~~--~s~~~~----~~dl~~I~~ia~e~g~~livD~Ah~~Gl 292 (358)
++ ..++++++..++. ...++++++ .+.|+. ..|+..|..+.++.+.++++|.+|+.|.
T Consensus 129 ~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 129 RGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 55 6777777665532 235788774 344542 6789899888888999999999999874
No 417
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=43.50 E-value=17 Score=37.33 Aligned_cols=28 Identities=11% Similarity=0.114 Sum_probs=25.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++.||++|+.||+|..
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5678888999999999999999999984
No 418
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=42.72 E-value=71 Score=28.95 Aligned_cols=49 Identities=8% Similarity=0.064 Sum_probs=31.5
Q ss_pred CCCCHHHHHHHhh----hcCCeEEEEcCCCC---CC-CCC--------HHHHHHHHHHcCCEEEE
Q 018300 236 GLVDYDMLEKTAI----LFRPKLIIAGASAY---PR-DFD--------YPRMRQIADAVGALLMM 284 (358)
Q Consensus 236 ~~iD~d~le~~i~----~~~~klIi~~~s~~---~~-~~d--------l~~I~~ia~e~g~~liv 284 (358)
..+++++|++.+. .+++++|++++-.. +. ..+ ++.|.++|+++|+.+++
T Consensus 104 ~~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 104 SSLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 3467777766553 34789999875321 11 111 46688899999988887
No 419
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=40.29 E-value=70 Score=28.66 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=44.2
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcC----CEEEEec
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDM 286 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g----~~livD~ 286 (358)
.+++++++. .+..+++.+.+.+.+|++|.++.+.......++++.+..++.+ +.+++=+
T Consensus 112 G~~vi~LG~-----~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG 174 (197)
T TIGR02370 112 GFDVIDLGR-----DVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGG 174 (197)
T ss_pred CcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 467776543 4567888888888899999998777766667888888888874 5666654
No 420
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=38.81 E-value=69 Score=26.93 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=38.1
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCC
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 280 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~ 280 (358)
.|+++.++++ ...+++-+.+.++++++|.++.-...+...++++.+..++.|+
T Consensus 27 GfeVidLG~~-----v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 27 GFNVVNLGVL-----SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred CCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCC
Confidence 3677765443 4668877777777899888765445566678899998888754
No 421
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=38.14 E-value=72 Score=29.88 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHcCCEEEEeccccc
Q 018300 267 DYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 267 dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
|.+.+.++++++++-+++|++|=.
T Consensus 53 ~~~~l~~~l~~~~i~~VIDATHPf 76 (248)
T PRK08057 53 GAEGLAAYLREEGIDLVIDATHPY 76 (248)
T ss_pred CHHHHHHHHHHCCCCEEEECCCcc
Confidence 667777777777777777777753
No 422
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=37.87 E-value=69 Score=30.20 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=20.0
Q ss_pred CCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 265 DFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 265 ~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
..+.+.+.++-++.++-+++|++|=.
T Consensus 52 ~l~~e~l~~~l~e~~i~llIDATHPy 77 (257)
T COG2099 52 FLGAEGLAAFLREEGIDLLIDATHPY 77 (257)
T ss_pred cCCHHHHHHHHHHcCCCEEEECCChH
Confidence 34678888888888888888888753
No 423
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=37.03 E-value=34 Score=27.24 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=39.6
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
..+..+++++++....+++.+.....|......+++++|+++|+.++.=..
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~~ 54 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHSM 54 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBSS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecCC
Confidence 457788888887655678877766666677889999999999999998763
No 424
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=36.90 E-value=81 Score=28.24 Aligned_cols=60 Identities=13% Similarity=0.050 Sum_probs=42.6
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcC----CEEEEecc
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDMA 287 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g----~~livD~A 287 (358)
.++++.++. .+..+++.+.+...+|++|.++.+......+++++.+..++.+ +.+++=+.
T Consensus 110 G~~vi~lG~-----~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 110 GFEVIDLGR-----DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred CCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECC
Confidence 356665432 4567888888888899999888766666667888888887764 56666543
No 425
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=36.51 E-value=54 Score=32.13 Aligned_cols=90 Identities=20% Similarity=0.316 Sum_probs=57.1
Q ss_pred CCCCCHHHHHHHhhhc----CC--eEEEEc-CCCCCC---CCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-
Q 018300 235 TGLVDYDMLEKTAILF----RP--KLIIAG-ASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK- 303 (358)
Q Consensus 235 ~~~iD~d~le~~i~~~----~~--klIi~~-~s~~~~---~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~- 303 (358)
+|.-++++++..++.. .+ +++++. .+.||. ..++..|..+.++++.++.. ..|..|.... .-.+.
T Consensus 140 tGmatl~Ei~~Av~~i~~~G~~~~~i~llhC~s~YP~~~~~~nL~~I~~Lk~~f~~pVG~-SdHt~G~~~~---~aAval 215 (329)
T TIGR03569 140 TGMATLEEIEAAVGVLRDAGTPDSNITLLHCTTEYPAPFEDVNLNAMDTLKEAFDLPVGY-SDHTLGIEAP---IAAVAL 215 (329)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCcCcEEEEEECCCCCCCcccCCHHHHHHHHHHhCCCEEE-CCCCccHHHH---HHHHHc
Confidence 4555677776655321 23 366654 345664 57899999999999988876 4688875321 01122
Q ss_pred CCcEE--EEcCcCcCccCcEEEEEEeC
Q 018300 304 YCDVV--TTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 304 gaDiv--~~S~hK~L~Gp~GG~I~~~~ 328 (358)
||+++ -++..|++.||-..+=+..+
T Consensus 216 GA~iIEkH~tldk~~~G~D~~~Sl~p~ 242 (329)
T TIGR03569 216 GATVIEKHFTLDKNLPGPDHKASLEPD 242 (329)
T ss_pred CCCEEEeCCChhhcCCCCChhhcCCHH
Confidence 88866 47888999888764444333
No 426
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=36.51 E-value=39 Score=31.70 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=30.9
Q ss_pred CCC-CHHHHHHHhhhcCCeEEEEcCCCCCCCCCH-HHHHHHHHHcCCEEE
Q 018300 236 GLV-DYDMLEKTAILFRPKLIIAGASAYPRDFDY-PRMRQIADAVGALLM 283 (358)
Q Consensus 236 ~~i-D~d~le~~i~~~~~klIi~~~s~~~~~~dl-~~I~~ia~e~g~~li 283 (358)
|.+ |.+.+++.+.+++.++|+ +.+ -|....+ +.+.+.|++.|++.+
T Consensus 50 G~lg~~~~l~~~l~~~~i~~vI-DAT-HPfA~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGIDAVI-DAT-HPFAAEISQNAIEACRELGIPYL 97 (249)
T ss_pred CCCCCHHHHHHHHHhCCCcEEE-ECC-CchHHHHHHHHHHHHhhcCcceE
Confidence 556 899999999877777665 433 2332222 336678899898876
No 427
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=34.67 E-value=82 Score=26.66 Aligned_cols=53 Identities=21% Similarity=0.226 Sum_probs=37.9
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCC
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 280 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~ 280 (358)
.|+++.+++ ...++++-+.+.++++++|.++.-.......++++.+..++.|+
T Consensus 29 GfeVi~LG~-----~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 29 GFNVVNLGV-----LSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred CCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 467776544 35678887777778899888765444455678899999998864
No 428
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=33.77 E-value=1.7e+02 Score=23.70 Aligned_cols=50 Identities=18% Similarity=0.090 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
..++.++++.++.. +|.+++++.-...... -.++.+..+++|+-+-+-.+
T Consensus 38 ~~l~~e~l~~l~~~-~peiliiGTG~~~~~~-~~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 38 EDLTAAHFEALLAL-QPEVILLGTGERQRFP-PPALLAPLLARGIGVEVMDT 87 (109)
T ss_pred ccCCHHHHHHHHhc-CCCEEEEecCCCCCcC-CHHHHHHHHHcCCeEEEECH
Confidence 36888999988764 6899999865555444 47788888889988766443
No 429
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=33.06 E-value=80 Score=32.60 Aligned_cols=55 Identities=18% Similarity=0.189 Sum_probs=39.6
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHc--CCEEEEeccccc
Q 018300 235 TGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHIS 290 (358)
Q Consensus 235 ~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~--g~~livD~Ah~~ 290 (358)
...++.+++.+.+.+.+|++|.++.. .+......++++.+|+. ++.+++=+.|+.
T Consensus 47 ~~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 47 TGPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred ccCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 34567788888887778999887532 33333456777888887 999999888764
No 430
>PLN00196 alpha-amylase; Provisional
Probab=32.01 E-value=31 Score=35.00 Aligned_cols=28 Identities=14% Similarity=0.275 Sum_probs=24.3
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..+++++++.||++|+.||.|.+
T Consensus 86 ~~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 86 SKYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567777899999999999999999984
No 431
>PLN02672 methionine S-methyltransferase
Probab=31.96 E-value=6.9e+02 Score=28.77 Aligned_cols=181 Identities=13% Similarity=0.132 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHhhhcccccccCCCCcHH---HHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q 018300 90 VCEIITKEKERQFKSLELIASENFTSRA---VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN 166 (358)
Q Consensus 90 ~~~~i~~e~~~~~~~i~lias~n~~s~~---V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~ 166 (358)
+++.++.-...-...++|--.+.-++++ -+..+.+.+.... -.|... ..|.. .++.++...++.+++..-.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~ 448 (1082)
T PLN02672 375 IFKFLKNGFHEVSGSLDLSFEDESVADEKIPFLAYLASALKGLS--YFPCEP-PAGSK---RFRNLIAGFMRIYHHIPLT 448 (1082)
T ss_pred HHHHHHccchhhhhhccccccccccchhhccHHHHHHHHHccCC--CCCCCC-Cccch---HHHHHHHHHHHHhcCCcCC
Confidence 4555554444445666765333333332 2333444443221 123322 22333 4666666777888887643
Q ss_pred CCcceEEeCCCHHHHHHHHHHh------ccCCCEEEecCCCCCcccccccccchh-----ccccCCceEEEEeceecCCC
Q 018300 167 KWGVNVQPLSGSPANFEVYTAI------LKPHDRIMGLDLPHGGHLSHGFMTPKR-----RVSGTSIYFESMPYRLDEST 235 (358)
Q Consensus 167 ~~~v~V~~~SGt~A~~~a~~al------l~pGD~Vl~~~~~~ggh~s~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~ 235 (358)
.-.+ |.+.|-..|+..++.-+ +..+.+...+. -|.+... ...-++..+.++.- |
T Consensus 449 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 513 (1082)
T PLN02672 449 PDNV-VVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK---------KWLTSLAIENATSDSKSDDVITVIEA---P-- 513 (1082)
T ss_pred ccce-EEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH---------HHHhHhhhhcccccCccCCeEEEEeC---C--
Confidence 2113 44567778887666433 33332222111 1111000 00111122222221 1
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEecccccccc
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLV 293 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~ 293 (358)
.. -|.+.+++++.+|++|+++...+- +.--++.|.+.+++.|+.|+.|.+-.+.+.
T Consensus 514 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (1082)
T PLN02672 514 RQ--SDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLELS 571 (1082)
T ss_pred Cc--chHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhheeec
Confidence 12 246677788789999998754432 223478889999999999999998665554
No 432
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=29.35 E-value=1.8e+02 Score=27.45 Aligned_cols=91 Identities=19% Similarity=0.198 Sum_probs=49.9
Q ss_pred eEEeCCCHH-HHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhh
Q 018300 171 NVQPLSGSP-ANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI 248 (358)
Q Consensus 171 ~V~~~SGt~-A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~ 248 (358)
.|...+||. |...+ .-| ..+++.++++--.||+.+.. ..+ +. . .++..+.+.+.+.++
T Consensus 4 ~ilvlGGT~Dar~la-~~L~~~~~~~~~ss~t~~g~~l~~----------~~~------~~-~--~~G~l~~e~l~~~l~ 63 (257)
T COG2099 4 RILLLGGTSDARALA-KKLAAAPVDIILSSLTGYGAKLAE----------QIG------PV-R--VGGFLGAEGLAAFLR 63 (257)
T ss_pred eEEEEeccHHHHHHH-HHhhccCccEEEEEcccccccchh----------ccC------Ce-e--ecCcCCHHHHHHHHH
Confidence 355667876 55433 333 34567777665455543221 111 10 1 257889999999998
Q ss_pred hcCCeEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEE
Q 018300 249 LFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLM 283 (358)
Q Consensus 249 ~~~~klIi~~~s~-~~~~~dl~~I~~ia~e~g~~li 283 (358)
+++.++++ +.++ |-..+ -+-..++|++.|++.+
T Consensus 64 e~~i~llI-DATHPyAa~i-S~Na~~aake~gipy~ 97 (257)
T COG2099 64 EEGIDLLI-DATHPYAARI-SQNAARAAKETGIPYL 97 (257)
T ss_pred HcCCCEEE-ECCChHHHHH-HHHHHHHHHHhCCcEE
Confidence 88887665 3321 21100 1234567777777665
No 433
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=29.30 E-value=95 Score=28.87 Aligned_cols=51 Identities=12% Similarity=0.001 Sum_probs=41.8
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
...+.+++++.+.....++|.+..+..|...+..++.++|+++|+.++.-+
T Consensus 188 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~~~~A~~~gi~~~~~~ 238 (265)
T cd03315 188 SAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRVLAVAEALGLPVMVGS 238 (265)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHHHHHHHHcCCcEEecC
Confidence 466788888887765678888887777878888999999999999988753
No 434
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=28.91 E-value=1.2e+02 Score=27.55 Aligned_cols=59 Identities=12% Similarity=0.121 Sum_probs=42.1
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcC--CEEEEec
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMDM 286 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g--~~livD~ 286 (358)
.++++.++. .+.++++.+.+.+.+|++|.++........+++++.+..++.+ +.+++=+
T Consensus 116 G~~Vi~LG~-----~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vGG 176 (213)
T cd02069 116 GYEVIDLGV-----MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGG 176 (213)
T ss_pred CCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 357776543 3567888888888899999887766666667888887777764 5555543
No 435
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=28.45 E-value=48 Score=25.62 Aligned_cols=20 Identities=25% Similarity=0.272 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018300 268 YPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~A 287 (358)
-++|+++|+++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 47899999999999999985
No 436
>PRK10785 maltodextrin glucosidase; Provisional
Probab=27.90 E-value=41 Score=35.70 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=22.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++.||+.|+.||.|..
T Consensus 221 ~~Gt~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 221 QLGGDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345566899999999999999999985
No 437
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=27.79 E-value=2.2e+02 Score=22.94 Aligned_cols=50 Identities=18% Similarity=0.064 Sum_probs=36.3
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.++.+++...+...+|.+|+++.-..... .-+++.+..+++|+-+-+-.+
T Consensus 38 ~l~~~~l~~~~~~~~peiliiGTG~~~~~-~~~~~~~~l~~~gI~vE~m~T 87 (109)
T cd00248 38 DLDPEALLPLLAEDRPDILLIGTGAEIAF-LPRALRAALRAAGIGVEVMST 87 (109)
T ss_pred cCCHHHHHHHHhhCCCCEEEEcCCCCCCc-CCHHHHHHHHHcCCeEEEeCc
Confidence 68889999887642489999986555543 346788888899988765443
No 438
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=27.77 E-value=1.6e+02 Score=28.28 Aligned_cols=54 Identities=15% Similarity=0.216 Sum_probs=34.6
Q ss_pred CCCHHHHHHH----hhhcCCeEEEEc--CC-CCCC-CCCHHHHHHHHHH-cCCEEEEeccccc
Q 018300 237 LVDYDMLEKT----AILFRPKLIIAG--AS-AYPR-DFDYPRMRQIADA-VGALLMMDMAHIS 290 (358)
Q Consensus 237 ~iD~d~le~~----i~~~~~klIi~~--~s-~~~~-~~dl~~I~~ia~e-~g~~livD~Ah~~ 290 (358)
.+.+++.... .....+++++++ .+ .|.+ ..|+..|..+.+. -+.+|++|.+|++
T Consensus 140 f~s~~e~~~aae~i~~~Gn~~vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHsv 202 (281)
T PRK12457 140 FMSPTQMKHVVSKCREAGNDRVILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHSL 202 (281)
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCccc
Confidence 4556654332 223357888874 22 2332 5788888766664 3999999999984
No 439
>PRK12721 secretion system apparatus protein SsaU; Reviewed
Probab=27.22 E-value=40 Score=33.30 Aligned_cols=37 Identities=8% Similarity=0.233 Sum_probs=27.1
Q ss_pred CCeEEEEcCCCCCC---------CC--------C--HHHHHHHHHHcCCEEEEecc
Q 018300 251 RPKLIIAGASAYPR---------DF--------D--YPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 251 ~~klIi~~~s~~~~---------~~--------d--l~~I~~ia~e~g~~livD~A 287 (358)
+.++|++|+++|-. .. | -.+|+++|+|+|++++.|-.
T Consensus 255 ~AdVVItNPTH~AVAL~Yd~~~~~aP~VvAKG~d~~A~~Ir~iA~e~~VPiven~p 310 (349)
T PRK12721 255 KSTAVVRNPTHIAVCLYYHPGETPLPRVLEKGKDAQALHIVKLAERNGIPVVENIP 310 (349)
T ss_pred CCcEEEEcCCceEEEEEeCCCCCCCCEEEEEeCcHHHHHHHHHHHHcCCCEEeCHH
Confidence 34688888876532 11 1 25899999999999999974
No 440
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=27.18 E-value=41 Score=29.01 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=23.9
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 018300 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (358)
Q Consensus 238 iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g 279 (358)
-|.+.|.+.+..++|.+|+++..+.....-.+.|.++.++..
T Consensus 50 ~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 50 EDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 456778888888999999996433222222455666666654
No 441
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=26.46 E-value=57 Score=34.82 Aligned_cols=30 Identities=20% Similarity=0.302 Sum_probs=26.4
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCEEEEeccc
Q 018300 259 ASAYPRDFDYPRMRQIADAVGALLMMDMAH 288 (358)
Q Consensus 259 ~s~~~~~~dl~~I~~ia~e~g~~livD~Ah 288 (358)
.+.||+..|++++++-|++.||-||+|-.+
T Consensus 207 ~sryGtPedfk~fVD~aH~~GIgViLD~V~ 236 (628)
T COG0296 207 TSRYGTPEDFKALVDAAHQAGIGVILDWVP 236 (628)
T ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEEecC
Confidence 345788889999999999999999999864
No 442
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=26.30 E-value=99 Score=29.58 Aligned_cols=49 Identities=14% Similarity=-0.104 Sum_probs=34.3
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEe
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD 285 (358)
..+.+++++.++....++|.+..+..|...+..+++++|+++|+.++.=
T Consensus 237 ~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~~~~~a~~~gi~~~~~ 285 (316)
T cd03319 237 CFSAADAARLAGGGAYDGINIKLMKTGGLTEALRIADLARAAGLKVMVG 285 (316)
T ss_pred CCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4556666666654455667766666666667788888888888887764
No 443
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=26.24 E-value=1.4e+02 Score=29.31 Aligned_cols=58 Identities=16% Similarity=0.237 Sum_probs=40.2
Q ss_pred CC-CCCHHHHHHHhhh----cCCeEEEEc--CCCC---C-CCCCHHHHHHHHHHcCCEEEEeccccccc
Q 018300 235 TG-LVDYDMLEKTAIL----FRPKLIIAG--ASAY---P-RDFDYPRMRQIADAVGALLMMDMAHISGL 292 (358)
Q Consensus 235 ~~-~iD~d~le~~i~~----~~~klIi~~--~s~~---~-~~~dl~~I~~ia~e~g~~livD~Ah~~Gl 292 (358)
++ ..+++++...++. ...+++++. .+.| + ...|+..|..+.+..+.++++|.+|+.|.
T Consensus 207 ~G~~~ti~E~l~A~e~i~~~GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 207 RGMSATIEEWLMAAEYILAEGNPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGK 275 (335)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCcc
Confidence 45 3477776554432 245777775 3344 2 35789999888888899999999999875
No 444
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=26.19 E-value=1.1e+02 Score=28.73 Aligned_cols=45 Identities=13% Similarity=0.178 Sum_probs=31.6
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 240 ~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+++++.+. +.+.++++.+ .+...++.++.+.+++++.++++|..
T Consensus 83 ~~~~~~~~~--~~davvig~G-l~~~~~~~~l~~~~~~~~~pvVlDa~ 127 (272)
T TIGR00196 83 VDEDEELLE--RYDVVVIGPG-LGQDPSFKKAVEEVLELDKPVVLDAD 127 (272)
T ss_pred HHHHHhhhc--cCCEEEEcCC-CCCCHHHHHHHHHHHhcCCCEEEEhH
Confidence 455555543 4577887654 44434488899999999999999964
No 445
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=26.10 E-value=1.5e+02 Score=23.58 Aligned_cols=53 Identities=9% Similarity=-0.036 Sum_probs=35.9
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHc--CCEEEEeccccc
Q 018300 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHIS 290 (358)
Q Consensus 238 iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~--g~~livD~Ah~~ 290 (358)
...+++.+.+...+|++|.++........+++.+.++.++. ++++++=+.|..
T Consensus 37 ~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t 91 (125)
T cd02065 37 VPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHPT 91 (125)
T ss_pred CCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcCC
Confidence 34566666666678999988755444444567777777777 488888776653
No 446
>PLN02361 alpha-amylase
Probab=25.77 E-value=49 Score=33.31 Aligned_cols=28 Identities=18% Similarity=0.179 Sum_probs=24.3
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..+++++++.||++|+.++.|..
T Consensus 70 ~~~Gt~~el~~li~~~h~~gi~vi~D~V 97 (401)
T PLN02361 70 SAYGSEHLLKSLLRKMKQYNVRAMADIV 97 (401)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEEc
Confidence 4566677899999999999999999985
No 447
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=25.69 E-value=1.5e+02 Score=27.98 Aligned_cols=53 Identities=8% Similarity=0.179 Sum_probs=33.7
Q ss_pred CCCHHHHHH----HhhhcCCeEEEEcC-CCCC--C-CCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 237 LVDYDMLEK----TAILFRPKLIIAGA-SAYP--R-DFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 237 ~iD~d~le~----~i~~~~~klIi~~~-s~~~--~-~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
...+++..- .......++|+++- ..++ + ..|+..+.-+.+ .+.+|++|.+|++
T Consensus 126 ~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf~y~r~~~D~~~ip~~k~-~~~PVi~DpSHsv 186 (258)
T TIGR01362 126 FLSPWDMKNVVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIMRE-LGCPVIFDATHSV 186 (258)
T ss_pred cCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHHHh-cCCCEEEeCCccc
Confidence 456665433 22333577888742 2223 2 578888876644 5899999999984
No 448
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=25.64 E-value=49 Score=34.72 Aligned_cols=27 Identities=22% Similarity=0.361 Sum_probs=22.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++.||++|+.||.|..
T Consensus 76 ~~Gt~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 76 TYGTLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 455566899999999999999999984
No 449
>PRK12313 glycogen branching enzyme; Provisional
Probab=25.44 E-value=51 Score=35.19 Aligned_cols=26 Identities=15% Similarity=0.220 Sum_probs=22.4
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+|+..|++++++.||++|+.||.|..
T Consensus 216 ~Gt~~d~k~lv~~~H~~Gi~VilD~V 241 (633)
T PRK12313 216 YGTPEDFMYLVDALHQNGIGVILDWV 241 (633)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 44556799999999999999999975
No 450
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=25.24 E-value=1.6e+02 Score=23.99 Aligned_cols=57 Identities=14% Similarity=0.077 Sum_probs=37.1
Q ss_pred EEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHc---CCEEEEe
Q 018300 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV---GALLMMD 285 (358)
Q Consensus 224 ~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~---g~~livD 285 (358)
++++.... ....+++.+.+.+.+|++|.++.+.......++++.+..++. ++.+++=
T Consensus 28 ~~vi~lG~-----~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~G 87 (122)
T cd02071 28 FEVIYTGL-----RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGG 87 (122)
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 45555322 356677777777778999988766544455677878777776 4455554
No 451
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=24.85 E-value=1.2e+02 Score=28.96 Aligned_cols=50 Identities=22% Similarity=0.333 Sum_probs=35.0
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCCC----CHHHHHHHHHHcCCEEEEeccccccccc
Q 018300 239 DYDMLEKTAILFRPKLIIAGASAYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVA 294 (358)
Q Consensus 239 D~d~le~~i~~~~~klIi~~~s~~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~ 294 (358)
+.+.+++.+. |..+|+++ +..|+.. .+++|.+.+++.++++++|+- |+..
T Consensus 91 av~~i~k~L~--RlhavVIG-PGLGRdp~~~k~i~~iley~~~~dvP~VIDaD---GL~L 144 (306)
T KOG3974|consen 91 AVDIIEKLLQ--RLHAVVIG-PGLGRDPAILKEIAKILEYLRGKDVPLVIDAD---GLWL 144 (306)
T ss_pred hHhHHHHHHh--heeEEEEC-CCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC---ceEe
Confidence 4466677653 56678887 4566532 367788899999999999985 5543
No 452
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=24.83 E-value=1.8e+02 Score=27.90 Aligned_cols=48 Identities=27% Similarity=0.373 Sum_probs=33.5
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCC---C-CCC-----------HHHHHHHHHHcCCEEEEe
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYP---R-DFD-----------YPRMRQIADAVGALLMMD 285 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~---~-~~d-----------l~~I~~ia~e~g~~livD 285 (358)
..|.+.+++.+.+.+|++||-.. .|. . ..+ ...|+++|+++|++++.=
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~A-Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhi 98 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAA-AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHI 98 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECc-cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEe
Confidence 45789999999888899876432 221 1 111 346889999999999753
No 453
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=24.61 E-value=1.4e+02 Score=29.67 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=43.3
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCC----CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEE
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~----~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~ 310 (358)
+.++.++.++.++ ...+.|+++.+... ...+++.+.++++..++.|++|+ |+..+......+. |||.+..
T Consensus 243 gV~~~eda~~a~~-~G~d~I~VSnhGGrqld~~~~~~~~L~ei~~~~~~~vi~dG----GIr~g~Dv~KALaLGA~aV~i 317 (361)
T cd04736 243 GIVTAEDAKRCIE-LGADGVILSNHGGRQLDDAIAPIEALAEIVAATYKPVLIDS----GIRRGSDIVKALALGANAVLL 317 (361)
T ss_pred cCCCHHHHHHHHH-CCcCEEEECCCCcCCCcCCccHHHHHHHHHHHhCCeEEEeC----CCCCHHHHHHHHHcCCCEEEE
Confidence 3577787777665 36777776433221 12348889999998899999997 4332111111223 7887754
Q ss_pred c
Q 018300 311 T 311 (358)
Q Consensus 311 S 311 (358)
.
T Consensus 318 G 318 (361)
T cd04736 318 G 318 (361)
T ss_pred C
Confidence 3
No 454
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=24.53 E-value=52 Score=34.45 Aligned_cols=27 Identities=19% Similarity=0.271 Sum_probs=21.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++-||++|+.||.|..
T Consensus 70 ~~Gt~~~~~~lv~~ah~~gi~vilD~v 96 (543)
T TIGR02403 70 LFGTMADFEELVSEAKKRNIKIMLDMV 96 (543)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345566788899999999999999974
No 455
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=24.39 E-value=1.8e+02 Score=24.96 Aligned_cols=47 Identities=13% Similarity=0.111 Sum_probs=34.5
Q ss_pred HHHHHHhhhcCCeEEEE--cC-CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 241 DMLEKTAILFRPKLIIA--GA-SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 241 d~le~~i~~~~~klIi~--~~-s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+-..+...+.++|++ ++ +.-|...|++.+..+|+-|++++-...+
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nIP~AtN~a 112 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNIPLATNVA 112 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCcccccCHH
Confidence 45555565556666554 32 3356788999999999999999988876
No 456
>PRK09505 malS alpha-amylase; Reviewed
Probab=24.07 E-value=55 Score=35.36 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=22.1
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+|+..|++++++-||++|+.||.|..
T Consensus 288 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V 313 (683)
T PRK09505 288 MGTEADLRTLVDEAHQRGIRILFDVV 313 (683)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34456799999999999999999985
No 457
>COG1803 MgsA Methylglyoxal synthase [Carbohydrate transport and metabolism]
Probab=23.44 E-value=2e+02 Score=24.40 Aligned_cols=47 Identities=15% Similarity=0.134 Sum_probs=34.2
Q ss_pred HHHHHHhhhcCCeEEEE--cC-CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 241 DMLEKTAILFRPKLIIA--GA-SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 241 d~le~~i~~~~~klIi~--~~-s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+-.++.+.+.+++++ ++ ...|...|++.+..+|.=|++++-...+
T Consensus 65 QQiGa~Iaeg~id~lIFf~DPLtaqPHdpDVkAL~Rl~~V~nIP~A~N~a 114 (142)
T COG1803 65 QQIGALIAEGKIDVLIFFWDPLTAQPHDPDVKALLRLATVYNIPVATNRA 114 (142)
T ss_pred HHHHHHHhcCcceEEEEEecCCCCCCCCcCHHHHHHHHHhhcccchhhHh
Confidence 45666666666666554 32 3356788999999999999999877765
No 458
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=23.12 E-value=2.8e+02 Score=19.62 Aligned_cols=47 Identities=19% Similarity=0.138 Sum_probs=30.0
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEE
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 284 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~liv 284 (358)
+.+.++++-+.+.+..-+.+.+.-.+ ....+.++.+.++++|+.++.
T Consensus 13 ~~~~~~~~~~~a~~~g~~~v~iTDh~--~~~~~~~~~~~~~~~gi~~i~ 59 (67)
T smart00481 13 GALSPEELVKRAKELGLKAIAITDHG--NLFGAVEFYKAAKKAGIKPII 59 (67)
T ss_pred ccCCHHHHHHHHHHcCCCEEEEeeCC--cccCHHHHHHHHHHcCCeEEE
Confidence 45667777776666566666553222 233456788888888877764
No 459
>PRK13585 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=22.67 E-value=1.3e+02 Score=27.47 Aligned_cols=48 Identities=13% Similarity=0.063 Sum_probs=30.7
Q ss_pred CHHHHHHHhhhcCCeEE-EEcCC--CCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 239 DYDMLEKTAILFRPKLI-IAGAS--AYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 239 D~d~le~~i~~~~~klI-i~~~s--~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
|+-++.+.+.....+.+ +.+-+ ......+.+.|.++|+++++++++++
T Consensus 33 ~~~e~a~~~~~~G~~~l~i~dl~~~~~~~~~~~~~i~~i~~~~~~~l~v~G 83 (241)
T PRK13585 33 DPVEVAKRWVDAGAETLHLVDLDGAFEGERKNAEAIEKIIEAVGVPVQLGG 83 (241)
T ss_pred CHHHHHHHHHHcCCCEEEEEechhhhcCCcccHHHHHHHHHHcCCcEEEcC
Confidence 55555555544445544 44433 23456678899999999999888864
No 460
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=22.64 E-value=60 Score=34.01 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=24.1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..+++++++.||++|+.||.|..
T Consensus 154 ~~~G~~~e~k~lV~~aH~~Gi~VilD~V 181 (542)
T TIGR02402 154 NAYGGPDDLKALVDAAHGLGLGVILDVV 181 (542)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3466677899999999999999999986
No 461
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=22.63 E-value=57 Score=32.35 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=28.0
Q ss_pred CCeEEEEcCCCCCC---------CC--------C--HHHHHHHHHHcCCEEEEecccc
Q 018300 251 RPKLIIAGASAYPR---------DF--------D--YPRMRQIADAVGALLMMDMAHI 289 (358)
Q Consensus 251 ~~klIi~~~s~~~~---------~~--------d--l~~I~~ia~e~g~~livD~Ah~ 289 (358)
+.++|++|+++|-. .. | -.+|+++|+|+|++++.|-.=+
T Consensus 264 ~AdVVItNPTH~AVAL~Yd~~~~~aP~VvAKG~d~~A~~Ir~~A~e~~VPiven~pLA 321 (358)
T PRK13109 264 RATLVIANPTHFAIALRYERSENPAPLVVAKGQDLIALKIREIAEENGIPVIEDKPLA 321 (358)
T ss_pred CCcEEEECCCceEEEeEeCCCCCCCCEEEEEeCcHHHHHHHHHHHHcCCCEEeCHHHH
Confidence 34688888876531 11 2 3579999999999999998533
No 462
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=22.47 E-value=1.6e+02 Score=26.71 Aligned_cols=51 Identities=14% Similarity=0.064 Sum_probs=38.7
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
...+++++.+.+.....+++.+..+..|...+..+++++|+++|+.++.=+
T Consensus 153 s~~~~~~~~~~~~~~~~d~~~~k~~~~GGi~~~~~i~~~a~~~gi~~~~~~ 203 (229)
T cd00308 153 SVTTVDDALEALELGAVDILQIKPTRVGGLTESRRAADLAEAFGIRVMVHG 203 (229)
T ss_pred CCCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 355677776666554567777777777777788999999999999988743
No 463
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=22.34 E-value=1.6e+02 Score=22.64 Aligned_cols=45 Identities=11% Similarity=0.104 Sum_probs=30.5
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCCCCHHH-HHHHHHHcCCEEEEecc
Q 018300 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPR-MRQIADAVGALLMMDMA 287 (358)
Q Consensus 241 d~le~~i~~~~~klIi~~~s~~~~~~dl~~-I~~ia~e~g~~livD~A 287 (358)
.++.+.+...+.++|++.....+ ..... +..+|++++++++.=.+
T Consensus 21 ~~v~k~l~~~~~~lvilA~d~~~--~~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 21 KEVLKALKKGKAKLVILAEDCSP--DSIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHTTCESEEEEETTSSS--GHHHHHHHHHHHHTTEEEEEESH
T ss_pred HHHHHHHHcCCCcEEEEcCCCCh--hhhcccchhheeccceeEEEECC
Confidence 56666666667788887543222 23556 88899999999876554
No 464
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=22.22 E-value=1.9e+02 Score=27.54 Aligned_cols=62 Identities=15% Similarity=0.221 Sum_probs=42.6
Q ss_pred cCCeEEEEcC------CCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC-----C-CCcEEEEcCcC
Q 018300 250 FRPKLIIAGA------SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-----K-YCDVVTTTTHK 314 (358)
Q Consensus 250 ~~~klIi~~~------s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl-----~-gaDiv~~S~hK 314 (358)
.++.+|++.- ..+....|+..+..+-++...++|+|-+|+.|-.. +..|+ . |+|-+..-.|-
T Consensus 179 GN~~vILCERGIRtfe~~TRntLDi~aV~~~kq~THLPVivDpSH~~Grr~---lv~pla~AA~AaGAdglmiEVHp 252 (286)
T COG2876 179 GNGNVILCERGIRTFEKATRNTLDISAVPILKQETHLPVIVDPSHATGRRD---LVEPLAKAAIAAGADGLMIEVHP 252 (286)
T ss_pred CCCcEEEEecccccccccccceechHHHHHHHhhcCCCEEECCCCcccchh---hHHHHHHHHHhccCCeeEEEecC
Confidence 3577777642 12334689999999999999999999999988531 11222 2 88866666663
No 465
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=21.77 E-value=2.9e+02 Score=24.45 Aligned_cols=65 Identities=12% Similarity=0.139 Sum_probs=42.3
Q ss_pred hhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q 018300 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN 166 (358)
Q Consensus 102 ~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~ 166 (358)
+..+-+.|.+++.++..++.+..--...+.--.|...+|+..+.++++-+-...++.+.+|.+++
T Consensus 112 ~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~~g~~~~p~~~~~~~~~i~~~~l~~lg~~~~ 176 (181)
T TIGR00421 112 RRKLVLVPRETPLNSIHLENMLRLSRMGAIILPPMPAFYTRPKSVEDMIDFIVGRVLDQLGIEND 176 (181)
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCCCcccCCCCCHHHHHHHHHHHHHHHcCCCcc
Confidence 46667778899999998886654322222212344446666666666655567788899998764
No 466
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=21.75 E-value=1.8e+02 Score=27.30 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=29.1
Q ss_pred cCCeEEEEc-CCCCCC---CCCHHHHHHHHHHcCCEEEEeccccccc
Q 018300 250 FRPKLIIAG-ASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGL 292 (358)
Q Consensus 250 ~~~klIi~~-~s~~~~---~~dl~~I~~ia~e~g~~livD~Ah~~Gl 292 (358)
.++++++++ .+++|. ..|+..+ .+-++.|++++.|++|++-.
T Consensus 158 gn~~v~lcERG~sFGYnnLV~DMrsl-~iM~~~~~PViFDaTHSvQ~ 203 (279)
T COG2877 158 GNNKVILCERGASFGYNNLVVDMRSL-PIMKEFGAPVIFDATHSVQQ 203 (279)
T ss_pred CCCcEEEEeccCccCcchhHHHhhhh-HHHHHcCCCeEEecccceeC
Confidence 357888875 345554 3455544 45678899999999999644
No 467
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=21.59 E-value=1.5e+02 Score=24.60 Aligned_cols=40 Identities=23% Similarity=0.201 Sum_probs=20.6
Q ss_pred HHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 242 MLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 242 ~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
.+++++.. ++-+|++.... .+.+.+.++|++++++|+.=.
T Consensus 73 ~l~~l~~~-~~P~iIvt~~~----~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 73 RLEKLFSY-NPPCIIVTRGL----EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp HHHHHCTT-T-S-EEEETTT-------HHHHHHHHHCT--EEEES
T ss_pred HHHHHhCC-CCCEEEEECcC----CCCHHHHHHHHHhCCcEEEcC
Confidence 34555443 44444443221 356899999999999988643
No 468
>PLN03244 alpha-amylase; Provisional
Probab=21.52 E-value=70 Score=35.19 Aligned_cols=29 Identities=28% Similarity=0.521 Sum_probs=25.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecccc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMAHI 289 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~Ah~ 289 (358)
.||+..|++++++.||+.|+-||.|..|.
T Consensus 436 RYGTPeDLK~LVD~aH~~GI~VILDvV~N 464 (872)
T PLN03244 436 RYGTPDDFKRLVDEAHGLGLLVFLDIVHS 464 (872)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecCc
Confidence 46667789999999999999999999764
No 469
>PRK05402 glycogen branching enzyme; Provisional
Probab=21.06 E-value=66 Score=34.98 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=21.5
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
|+..|++++++.||+.|+.||.|..
T Consensus 312 Gt~~dfk~lV~~~H~~Gi~VilD~V 336 (726)
T PRK05402 312 GTPDDFRYFVDACHQAGIGVILDWV 336 (726)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3445799999999999999999975
No 470
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=21.06 E-value=62 Score=33.77 Aligned_cols=26 Identities=19% Similarity=0.296 Sum_probs=21.9
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+|...|++++++-||++|+.||.|..
T Consensus 72 ~Gt~~df~~Lv~~ah~~Gi~vilD~V 97 (539)
T TIGR02456 72 FGTIDDFKDFVDEAHARGMRVIIDLV 97 (539)
T ss_pred hCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45567889999999999999999974
No 471
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=20.83 E-value=2.6e+02 Score=24.77 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=20.4
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEecccc
Q 018300 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHI 289 (358)
Q Consensus 240 ~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~ 289 (358)
+-.+++.++..+|+++++-.+. =+..+...|++.|+.++.=++..
T Consensus 84 ~~~~~rfl~~~~P~~~i~~EtE-----lWPnll~~a~~~~ip~~LvNarl 128 (186)
T PF04413_consen 84 PWAVRRFLDHWRPDLLIWVETE-----LWPNLLREAKRRGIPVVLVNARL 128 (186)
T ss_dssp HHHHHHHHHHH--SEEEEES---------HHHHHH-----S-EEEEEE--
T ss_pred HHHHHHHHHHhCCCEEEEEccc-----cCHHHHHHHhhcCCCEEEEeeee
Confidence 4556777766689877664331 13567888899998877644433
No 472
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=20.74 E-value=2.5e+02 Score=22.47 Aligned_cols=45 Identities=11% Similarity=-0.015 Sum_probs=31.4
Q ss_pred HHHHhhh-cCCeEEEEcCCCCC---CCCCHHHHHHHHHHcCCEEEEecc
Q 018300 243 LEKTAIL-FRPKLIIAGASAYP---RDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 243 le~~i~~-~~~klIi~~~s~~~---~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+.+.. .+..+|+..++..- ...|-..|+..|-+++++++.+..
T Consensus 59 i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 59 VDAAIAEKGKFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred HHHHHhCCCCEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEECHH
Confidence 4455565 57777765443222 355678999999999999998764
No 473
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=20.70 E-value=1.8e+02 Score=22.20 Aligned_cols=44 Identities=14% Similarity=0.006 Sum_probs=29.4
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 241 d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
++..+.++..+.++|++....-+ .-.+.|..+|++++++++.-.
T Consensus 17 ~~v~kai~~gkaklViiA~D~~~--~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 17 KQTVKALKRGSVKEVVVAEDADP--RLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHcCCeeEEEEECCCCH--HHHHHHHHHHHHcCCCEEEEC
Confidence 55566666667888887532222 135678899999999886543
No 474
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=20.65 E-value=9.1e+02 Score=24.59 Aligned_cols=88 Identities=19% Similarity=0.144 Sum_probs=43.5
Q ss_pred HHHHHHHHhc--cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEE
Q 018300 180 ANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (358)
Q Consensus 180 A~~~a~~all--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~ 257 (358)
|..-++..+. .|+=.|+++..+-.|. .. .....+..+...++|+| ..-.+.+.++..+||++++
T Consensus 64 a~~pLv~~l~~~~P~~~ilvTt~T~Tg~-----e~---a~~~~~~~v~h~YlP~D------~~~~v~rFl~~~~P~l~Ii 129 (419)
T COG1519 64 AALPLVRALRERFPDLRILVTTMTPTGA-----ER---AAALFGDSVIHQYLPLD------LPIAVRRFLRKWRPKLLII 129 (419)
T ss_pred HHHHHHHHHHHhCCCCCEEEEecCccHH-----HH---HHHHcCCCeEEEecCcC------chHHHHHHHHhcCCCEEEE
Confidence 4444555553 3676777664322221 00 11233332344454554 2355666666668998766
Q ss_pred cCCC-CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 258 GASA-YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 258 ~~s~-~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
..+. +| -+..-|++.|++++.=++
T Consensus 130 ~EtElWP------nli~e~~~~~~p~~LvNa 154 (419)
T COG1519 130 METELWP------NLINELKRRGIPLVLVNA 154 (419)
T ss_pred EeccccH------HHHHHHHHcCCCEEEEee
Confidence 5442 22 344455566666555443
No 475
>COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only]
Probab=20.63 E-value=3.5e+02 Score=24.40 Aligned_cols=53 Identities=19% Similarity=0.175 Sum_probs=36.4
Q ss_pred CceEEEEeceecCCCCCCCHHHHHHHhh-hcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEE
Q 018300 221 SIYFESMPYRLDESTGLVDYDMLEKTAI-LFRPKLIIAGASAYPRDFDYPRMRQIADAVGALL 282 (358)
Q Consensus 221 g~~~~~~~~~~~~~~~~iD~d~le~~i~-~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~l 282 (358)
+..++++.+.+||++.. ++.+++.+. ...++.+.+. .+.+.+.++++.+++..
T Consensus 102 ~~~v~vv~itvDPerDt--p~~lk~Y~~~~~~~~~~~lt-------g~~~~~~~~~k~~~V~~ 155 (207)
T COG1999 102 GDDVQVVFITVDPERDT--PEVLKKYAELNFDPRWIGLT-------GTPEQIEEVAKAYGVFY 155 (207)
T ss_pred CCCEEEEEEEECCCCCC--HHHHHHHhcccCCCCeeeee-------CCHHHHHHHHHHhccee
Confidence 34567777888887655 677777765 3445555433 25788999999998874
No 476
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=20.59 E-value=1.5e+02 Score=28.73 Aligned_cols=50 Identities=10% Similarity=-0.045 Sum_probs=36.4
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
..+++++++.++....++|.+.....|...+..++.++|+++|+.++.=+
T Consensus 249 ~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~i~~~a~~~g~~~~~~~ 298 (357)
T cd03316 249 LYTRWEFRDLLEAGAVDIIQPDVTKVGGITEAKKIAALAEAHGVRVAPHG 298 (357)
T ss_pred cccHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeccC
Confidence 45667777776544456666666666667778899999999999987654
No 477
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase. This model represents geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The active enzyme is reported to be a homopentamer in Methanobacterium thermoautotrophicum but is reported to be a homodimer in Thermoplasma acidophilum.
Probab=20.46 E-value=1.5e+02 Score=26.95 Aligned_cols=41 Identities=12% Similarity=0.008 Sum_probs=27.1
Q ss_pred HHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHH-cCCEEEEe
Q 018300 245 KTAILFRPKLIIAGASAYPRDFDYPRMRQIADA-VGALLMMD 285 (358)
Q Consensus 245 ~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e-~g~~livD 285 (358)
+.+.+..++.|.++.|..-...++.++.+.+|+ ++++++.=
T Consensus 18 ~~v~~~gtDaI~VGGS~gvt~~~~~~~v~~ik~~~~lPvilf 59 (205)
T TIGR01769 18 KNAKDAGTDAIMVGGSLGIVESNLDQTVKKIKKITNLPVILF 59 (205)
T ss_pred HHHHhcCCCEEEEcCcCCCCHHHHHHHHHHHHhhcCCCEEEE
Confidence 344445578898887643344557777777787 67888763
No 478
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=20.20 E-value=2.4e+02 Score=26.56 Aligned_cols=71 Identities=17% Similarity=0.213 Sum_probs=45.8
Q ss_pred CHHH-HHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCc-EEEEcCcC
Q 018300 239 DYDM-LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCD-VVTTTTHK 314 (358)
Q Consensus 239 D~d~-le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaD-iv~~S~hK 314 (358)
++++ ++..++...++.|++....+|...|.++|...++..+.++++-. |...... ..-+..+| +++.|.=|
T Consensus 164 ~~~~~v~dtver~~aDaVI~tG~~TG~~~d~~el~~a~~~~~~pvlvGS----Gv~~eN~-~~~l~~adG~IvgT~lK 236 (263)
T COG0434 164 SLEEAVKDTVERGLADAVIVTGSRTGSPPDLEELKLAKEAVDTPVLVGS----GVNPENI-EELLKIADGVIVGTSLK 236 (263)
T ss_pred CHHHHHHHHHHccCCCEEEEecccCCCCCCHHHHHHHHhccCCCEEEec----CCCHHHH-HHHHHHcCceEEEEEEc
Confidence 4544 34445555678888887889999999999999998898888743 4331110 01122566 56666666
No 479
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.
Probab=20.19 E-value=2.8e+02 Score=26.65 Aligned_cols=64 Identities=17% Similarity=0.084 Sum_probs=37.8
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcC
Q 018300 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHK 314 (358)
Q Consensus 239 D~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK 314 (358)
++++.-+.+.+.++++|.+.. +. + .++.+..|++|+.++.|.... ... ....+ |+|.++...+.
T Consensus 75 ~~~~~~~~~~~~~v~~v~~~~---g~--p-~~~i~~lk~~g~~v~~~v~s~-~~a-----~~a~~~GaD~Ivv~g~e 139 (307)
T TIGR03151 75 FVDELVDLVIEEKVPVVTTGA---GN--P-GKYIPRLKENGVKVIPVVASV-ALA-----KRMEKAGADAVIAEGME 139 (307)
T ss_pred CHHHHHHHHHhCCCCEEEEcC---CC--c-HHHHHHHHHcCCEEEEEcCCH-HHH-----HHHHHcCCCEEEEECcc
Confidence 445544434456889887642 21 2 357778888999999886422 110 01112 89988876654
No 480
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=20.10 E-value=72 Score=33.93 Aligned_cols=27 Identities=11% Similarity=0.198 Sum_probs=23.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++.||+.|+.||.|..
T Consensus 201 ~~Gt~~dlk~lV~~~H~~Gi~VilD~V 227 (613)
T TIGR01515 201 RFGTPDDFMYFVDACHQAGIGVILDWV 227 (613)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 455566899999999999999999986
No 481
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=20.10 E-value=2.7e+02 Score=22.51 Aligned_cols=41 Identities=12% Similarity=0.165 Sum_probs=25.1
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 241 d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+++.... .++.+|+... ..-+++.++|+++|+.++-.+|
T Consensus 70 ~~v~~~~~~-g~~~v~~~~g-----~~~~~~~~~a~~~gi~vigp~C 110 (116)
T PF13380_consen 70 EIVDEAAAL-GVKAVWLQPG-----AESEELIEAAREAGIRVIGPNC 110 (116)
T ss_dssp HHHHHHHHH-T-SEEEE-TT-----S--HHHHHHHHHTT-EEEESS-
T ss_pred HHHHHHHHc-CCCEEEEEcc-----hHHHHHHHHHHHcCCEEEeCCc
Confidence 444444433 5777777554 4558899999999999997765
Done!