Query 018300
Match_columns 358
No_of_seqs 287 out of 2587
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 13:05:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 1.3E-71 4.5E-76 550.3 20.0 281 77-357 29-318 (490)
2 2a7v_A Serine hydroxymethyltra 100.0 4.6E-50 1.6E-54 407.2 18.3 278 80-357 32-318 (490)
3 1rv3_A Serine hydroxymethyltra 100.0 2.1E-44 7.3E-49 364.6 20.7 282 76-357 18-308 (483)
4 3h7f_A Serine hydroxymethyltra 100.0 3.3E-36 1.1E-40 301.0 20.9 262 79-355 22-283 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 2.2E-34 7.5E-39 282.1 21.8 260 81-355 4-263 (417)
6 3ecd_A Serine hydroxymethyltra 100.0 2.7E-32 9.1E-37 267.6 19.5 263 78-354 8-270 (425)
7 3gbx_A Serine hydroxymethyltra 100.0 2.6E-32 8.9E-37 267.2 19.2 259 83-354 11-269 (420)
8 2vi8_A Serine hydroxymethyltra 100.0 3.3E-29 1.1E-33 244.3 22.0 256 81-351 2-257 (405)
9 2dkj_A Serine hydroxymethyltra 100.0 6.3E-29 2.2E-33 242.5 22.2 256 84-353 5-260 (407)
10 3hvy_A Cystathionine beta-lyas 99.9 2.5E-23 8.6E-28 207.6 20.2 235 85-348 15-276 (427)
11 3i16_A Aluminum resistance pro 99.9 3.5E-22 1.2E-26 199.3 19.8 230 85-342 17-269 (427)
12 3jzl_A Putative cystathionine 99.9 1.4E-20 4.7E-25 186.7 20.4 230 88-342 6-252 (409)
13 3ht4_A Aluminum resistance pro 99.8 3.7E-20 1.3E-24 184.8 17.6 235 84-342 8-258 (431)
14 3ju7_A Putative PLP-dependent 99.8 2.5E-20 8.5E-25 182.4 16.0 207 105-348 5-220 (377)
15 3zrp_A Serine-pyruvate aminotr 99.8 8.8E-20 3E-24 175.6 16.2 198 104-329 3-205 (384)
16 3isl_A Purine catabolism prote 99.8 1.8E-19 6.2E-24 175.7 17.9 205 103-341 11-220 (416)
17 3nnk_A Ureidoglycine-glyoxylat 99.8 1.4E-19 4.9E-24 176.1 16.7 207 103-343 13-224 (411)
18 2dr1_A PH1308 protein, 386AA l 99.8 5.6E-19 1.9E-23 170.3 18.1 192 108-328 25-223 (386)
19 3dr4_A Putative perosamine syn 99.8 1.7E-19 5.7E-24 175.6 14.3 203 106-344 26-231 (391)
20 3cai_A Possible aminotransfera 99.8 2.4E-19 8.2E-24 174.7 15.3 207 110-342 34-249 (406)
21 3tqx_A 2-amino-3-ketobutyrate 99.8 3.7E-19 1.3E-23 172.5 16.3 198 114-342 58-267 (399)
22 2huf_A Alanine glyoxylate amin 99.8 3E-19 1E-23 173.0 15.4 206 104-343 20-230 (393)
23 3frk_A QDTB; aminotransferase, 99.8 1.8E-19 6.1E-24 174.3 13.4 196 112-345 13-213 (373)
24 1b9h_A AHBA synthase, protein 99.8 5.6E-19 1.9E-23 171.5 16.9 188 114-329 15-203 (388)
25 4hvk_A Probable cysteine desul 99.8 3.4E-19 1.2E-23 170.8 15.0 199 109-329 7-214 (382)
26 3nyt_A Aminotransferase WBPE; 99.8 1.6E-19 5.4E-24 174.6 12.5 201 109-346 9-213 (367)
27 2c81_A Glutamine-2-deoxy-scyll 99.8 8.4E-19 2.9E-23 172.5 17.6 202 110-342 10-215 (418)
28 1o69_A Aminotransferase; struc 99.8 1.7E-18 5.8E-23 169.3 19.1 197 113-343 9-208 (394)
29 3kgw_A Alanine-glyoxylate amin 99.8 6.3E-19 2.2E-23 170.1 15.9 206 103-342 23-233 (393)
30 3f0h_A Aminotransferase; RER07 99.8 7.2E-19 2.5E-23 169.4 16.1 206 103-342 19-229 (376)
31 1vjo_A Alanine--glyoxylate ami 99.8 7.7E-19 2.6E-23 170.4 15.7 203 105-341 36-243 (393)
32 4eb5_A Probable cysteine desul 99.8 7.4E-19 2.5E-23 169.2 15.2 199 109-329 7-214 (382)
33 2z9v_A Aspartate aminotransfer 99.8 1E-18 3.5E-23 169.2 16.1 199 109-342 15-219 (392)
34 3f9t_A TDC, L-tyrosine decarbo 99.8 4.8E-18 1.6E-22 163.6 20.0 200 109-329 37-262 (397)
35 1bs0_A Protein (8-amino-7-oxon 99.8 4.3E-18 1.5E-22 164.8 19.4 207 103-342 40-257 (384)
36 2ch1_A 3-hydroxykynurenine tra 99.8 1.3E-18 4.4E-23 168.8 15.5 202 105-341 20-227 (396)
37 1iug_A Putative aspartate amin 99.8 6.7E-19 2.3E-23 167.6 12.8 192 105-329 3-201 (352)
38 3kki_A CAI-1 autoinducer synth 99.8 4.1E-18 1.4E-22 166.9 18.6 220 84-330 24-271 (409)
39 1kmj_A Selenocysteine lyase; p 99.8 3E-18 1E-22 166.0 17.2 206 112-343 33-249 (406)
40 1mdo_A ARNB aminotransferase; 99.8 2.5E-18 8.4E-23 166.8 16.3 191 113-342 17-211 (393)
41 2fq6_A Cystathionine beta-lyas 99.8 1.9E-18 6.5E-23 171.5 15.5 168 133-329 73-248 (415)
42 3lvm_A Cysteine desulfurase; s 99.8 3.4E-18 1.2E-22 167.4 17.0 200 109-329 29-240 (423)
43 1eg5_A Aminotransferase; PLP-d 99.8 5.5E-18 1.9E-22 163.0 17.9 199 110-329 9-218 (384)
44 1fc4_A 2-amino-3-ketobutyrate 99.8 4.4E-18 1.5E-22 165.7 17.0 197 114-342 60-269 (401)
45 2yrr_A Aminotransferase, class 99.8 1.5E-18 5E-23 164.9 13.2 195 105-329 2-202 (353)
46 1t3i_A Probable cysteine desul 99.8 4.7E-18 1.6E-22 165.6 17.1 205 113-343 39-254 (420)
47 2bkw_A Alanine-glyoxylate amin 99.8 1.3E-18 4.6E-23 167.6 13.0 201 103-329 5-217 (385)
48 1gc0_A Methionine gamma-lyase; 99.8 3.5E-18 1.2E-22 167.5 16.2 195 104-329 29-229 (398)
49 1gd9_A Aspartate aminotransfer 99.8 1.8E-17 6.2E-22 160.7 20.8 237 80-343 4-258 (389)
50 3hbx_A GAD 1, glutamate decarb 99.8 1.3E-17 4.5E-22 169.1 20.4 222 89-329 41-293 (502)
51 1m32_A 2-aminoethylphosphonate 99.8 1.1E-18 3.9E-23 166.4 11.9 198 104-329 5-209 (366)
52 3vax_A Putative uncharacterize 99.8 1.5E-18 5E-23 168.6 12.5 199 109-328 27-235 (400)
53 2oga_A Transaminase; PLP-depen 99.8 3E-18 1E-22 167.6 14.8 202 104-343 32-238 (399)
54 2w8t_A SPT, serine palmitoyltr 99.8 1.1E-17 3.6E-22 165.5 18.5 190 114-330 79-279 (427)
55 2fnu_A Aminotransferase; prote 99.8 7.4E-18 2.5E-22 162.0 16.8 195 110-343 7-207 (375)
56 3a9z_A Selenocysteine lyase; P 99.8 3.5E-18 1.2E-22 168.2 14.4 205 110-329 26-261 (432)
57 2e7j_A SEP-tRNA:Cys-tRNA synth 99.8 2.6E-18 9E-23 164.9 13.1 196 109-329 16-225 (371)
58 1o4s_A Aspartate aminotransfer 99.8 1.3E-17 4.6E-22 162.3 18.1 212 103-342 42-270 (389)
59 1qgn_A Protein (cystathionine 99.8 1.4E-17 4.7E-22 166.9 18.3 161 142-329 112-279 (445)
60 3b8x_A WBDK, pyridoxamine 5-ph 99.8 1.7E-17 6E-22 161.4 18.4 196 110-343 9-214 (390)
61 3uwc_A Nucleotide-sugar aminot 99.8 5.1E-18 1.8E-22 163.5 14.5 199 106-344 10-213 (374)
62 1u08_A Hypothetical aminotrans 99.8 4E-17 1.4E-21 158.3 20.7 234 81-342 10-260 (386)
63 2po3_A 4-dehydrase; external a 99.8 2E-17 6.9E-22 163.0 18.6 192 114-343 30-224 (424)
64 2o0r_A RV0858C (N-succinyldiam 99.8 4.4E-17 1.5E-21 159.6 20.5 227 80-328 4-249 (411)
65 2dou_A Probable N-succinyldiam 99.8 2.5E-17 8.6E-22 159.1 18.3 232 85-342 3-254 (376)
66 3a2b_A Serine palmitoyltransfe 99.7 2.9E-17 1E-21 159.9 18.5 207 104-342 45-264 (398)
67 3dzz_A Putative pyridoxal 5'-p 99.7 1.4E-17 4.8E-22 160.9 16.1 211 104-342 29-259 (391)
68 3nra_A Aspartate aminotransfer 99.7 2E-17 6.9E-22 160.9 17.0 198 113-328 53-269 (407)
69 2dgk_A GAD-beta, GADB, glutama 99.7 5.8E-17 2E-21 161.5 20.4 199 112-329 52-278 (452)
70 3ndn_A O-succinylhomoserine su 99.7 2E-17 6.8E-22 164.0 17.0 168 133-329 72-245 (414)
71 1v2d_A Glutamine aminotransfer 99.7 2.8E-17 9.6E-22 159.1 17.3 221 80-329 4-239 (381)
72 3ele_A Amino transferase; RER0 99.7 1.9E-16 6.4E-21 153.9 23.2 208 103-331 36-267 (398)
73 3qhx_A Cystathionine gamma-syn 99.7 2.3E-17 7.9E-22 161.9 16.8 169 142-342 64-238 (392)
74 3ly1_A Putative histidinol-pho 99.7 7.7E-17 2.6E-21 154.1 19.5 209 103-345 17-240 (354)
75 3vp6_A Glutamate decarboxylase 99.7 9.4E-17 3.2E-21 163.2 21.1 178 142-329 129-332 (511)
76 1yiz_A Kynurenine aminotransfe 99.7 7.9E-17 2.7E-21 158.5 19.8 236 80-342 16-279 (429)
77 1elu_A L-cysteine/L-cystine C- 99.7 8.5E-18 2.9E-22 162.2 12.3 200 111-329 25-236 (390)
78 2x5d_A Probable aminotransfera 99.7 6.6E-17 2.2E-21 158.4 18.5 237 80-342 11-269 (412)
79 1jg8_A L-ALLO-threonine aldola 99.7 9.7E-18 3.3E-22 159.9 12.1 190 113-328 15-217 (347)
80 3get_A Histidinol-phosphate am 99.7 2.8E-17 9.7E-22 157.9 15.4 208 103-344 31-253 (365)
81 1b5p_A Protein (aspartate amin 99.7 1.4E-16 4.6E-21 155.0 20.4 237 80-342 5-258 (385)
82 1e5e_A MGL, methionine gamma-l 99.7 1.6E-17 5.3E-22 163.7 13.8 170 142-343 60-236 (404)
83 3cog_A Cystathionine gamma-lya 99.7 2.6E-17 8.7E-22 162.4 15.3 168 142-342 65-239 (403)
84 1j32_A Aspartate aminotransfer 99.7 1.1E-16 3.6E-21 155.2 19.4 214 103-342 31-261 (388)
85 3euc_A Histidinol-phosphate am 99.7 4.3E-17 1.5E-21 156.8 16.4 209 103-344 31-252 (367)
86 3fvs_A Kynurenine--oxoglutarat 99.7 4.7E-17 1.6E-21 159.5 16.9 230 79-328 6-263 (422)
87 3ri6_A O-acetylhomoserine sulf 99.7 1.7E-17 5.7E-22 165.6 13.5 168 133-329 73-246 (430)
88 3mc6_A Sphingosine-1-phosphate 99.7 2.2E-17 7.4E-22 166.2 14.5 199 115-329 77-296 (497)
89 3h14_A Aminotransferase, class 99.7 1.2E-16 3.9E-21 155.3 19.0 203 102-329 31-247 (391)
90 2z61_A Probable aspartate amin 99.7 2.6E-16 8.8E-21 151.7 21.3 206 103-342 30-246 (370)
91 2aeu_A Hypothetical protein MJ 99.7 2.9E-17 9.9E-22 160.1 14.8 188 110-342 38-230 (374)
92 4dq6_A Putative pyridoxal phos 99.7 4.4E-17 1.5E-21 157.4 15.8 226 86-342 17-263 (391)
93 2rfv_A Methionine gamma-lyase; 99.7 2.6E-17 8.9E-22 161.1 13.7 154 153-329 69-228 (398)
94 2jis_A Cysteine sulfinic acid 99.7 1.7E-16 5.7E-21 161.2 20.1 174 144-329 144-343 (515)
95 3acz_A Methionine gamma-lyase; 99.7 1E-16 3.5E-21 156.9 17.7 167 133-328 50-222 (389)
96 3ffh_A Histidinol-phosphate am 99.7 2.1E-16 7.2E-21 151.7 19.2 230 80-345 7-252 (363)
97 2ctz_A O-acetyl-L-homoserine s 99.7 1E-16 3.5E-21 158.7 17.2 190 107-327 25-222 (421)
98 3ffr_A Phosphoserine aminotran 99.7 3.3E-17 1.1E-21 156.3 13.1 199 103-328 4-206 (362)
99 1c7n_A Cystalysin; transferase 99.7 1.3E-16 4.6E-21 155.0 17.5 212 103-342 32-263 (399)
100 3nmy_A Xometc, cystathionine g 99.7 8.3E-17 2.8E-21 158.8 15.8 175 133-342 58-240 (400)
101 2o1b_A Aminotransferase, class 99.7 4.4E-17 1.5E-21 159.7 13.7 238 81-342 24-277 (404)
102 3e2y_A Kynurenine-oxoglutarate 99.7 7.3E-17 2.5E-21 157.3 14.8 232 81-329 3-257 (410)
103 2okj_A Glutamate decarboxylase 99.7 3.3E-16 1.1E-20 158.3 19.9 174 144-329 128-329 (504)
104 1pff_A Methionine gamma-lyase; 99.7 6.8E-17 2.3E-21 153.4 13.6 165 153-346 3-175 (331)
105 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 1.7E-16 5.8E-21 157.3 16.7 187 110-329 37-235 (437)
106 3ke3_A Putative serine-pyruvat 99.7 6E-17 2E-21 157.6 13.1 178 141-342 29-222 (379)
107 3p1t_A Putative histidinol-pho 99.7 4.6E-16 1.6E-20 147.5 18.8 208 95-343 9-223 (337)
108 1xi9_A Putative transaminase; 99.7 1.7E-16 5.9E-21 155.1 16.3 206 103-328 39-263 (406)
109 3pj0_A LMO0305 protein; struct 99.7 2.9E-17 9.7E-22 157.4 10.5 207 100-342 11-230 (359)
110 3qm2_A Phosphoserine aminotran 99.7 2.4E-18 8.3E-23 169.4 3.0 201 104-329 28-237 (386)
111 2zc0_A Alanine glyoxylate tran 99.7 1.2E-15 4.2E-20 148.6 21.7 235 79-343 7-271 (407)
112 1v72_A Aldolase; PLP-dependent 99.7 1.1E-16 3.9E-21 152.4 14.0 191 113-329 19-227 (356)
113 3b46_A Aminotransferase BNA3; 99.7 2.7E-16 9.3E-21 156.4 17.2 224 86-328 33-291 (447)
114 3m5u_A Phosphoserine aminotran 99.7 3.6E-17 1.2E-21 159.7 10.5 203 103-342 5-216 (361)
115 1svv_A Threonine aldolase; str 99.7 1.4E-16 4.8E-21 151.7 14.3 190 113-329 25-231 (359)
116 1cs1_A CGS, protein (cystathio 99.7 3.6E-16 1.2E-20 152.2 17.4 162 153-342 57-224 (386)
117 3mad_A Sphingosine-1-phosphate 99.7 1.2E-15 4E-20 154.5 21.6 174 143-329 134-328 (514)
118 3k40_A Aromatic-L-amino-acid d 99.7 3.1E-16 1E-20 158.0 17.2 177 141-329 106-318 (475)
119 3kax_A Aminotransferase, class 99.7 2.3E-16 7.9E-21 151.9 15.4 210 104-342 26-255 (383)
120 3l8a_A METC, putative aminotra 99.7 1.3E-16 4.4E-21 157.1 13.8 214 103-342 62-293 (421)
121 2z67_A O-phosphoseryl-tRNA(SEC 99.7 6E-17 2E-21 162.0 11.5 214 109-341 87-321 (456)
122 2gb3_A Aspartate aminotransfer 99.7 1.6E-16 5.6E-21 155.6 14.2 205 103-329 44-261 (409)
123 3ezs_A Aminotransferase ASPB; 99.7 6.5E-16 2.2E-20 148.8 18.0 227 86-343 4-256 (376)
124 3e77_A Phosphoserine aminotran 99.7 3E-17 1E-21 161.1 8.4 197 109-330 19-223 (377)
125 4e1o_A HDC, histidine decarbox 99.7 7.1E-16 2.4E-20 155.4 18.6 177 142-329 112-325 (481)
126 3jtx_A Aminotransferase; NP_28 99.7 7.7E-16 2.6E-20 149.3 18.2 226 81-328 4-261 (396)
127 3g0t_A Putative aminotransfera 99.7 8.5E-16 2.9E-20 151.1 18.6 208 103-328 45-276 (437)
128 3dyd_A Tyrosine aminotransfera 99.7 9.1E-16 3.1E-20 151.6 18.7 192 113-329 71-280 (427)
129 1n8p_A Cystathionine gamma-lya 99.7 2.5E-16 8.4E-21 154.7 14.4 160 153-342 60-229 (393)
130 3cq5_A Histidinol-phosphate am 99.7 3.8E-15 1.3E-19 143.7 22.4 211 105-344 33-257 (369)
131 1wyu_B Glycine dehydrogenase s 99.7 6.1E-16 2.1E-20 155.4 17.4 192 114-329 78-287 (474)
132 1ibj_A CBL, cystathionine beta 99.7 3E-16 1E-20 157.9 15.0 162 152-342 137-304 (464)
133 1d2f_A MALY protein; aminotran 99.7 9.4E-16 3.2E-20 148.8 17.8 211 103-342 29-258 (390)
134 3e9k_A Kynureninase; kynurenin 99.7 3.2E-17 1.1E-21 163.7 6.4 165 151-329 114-293 (465)
135 3rq1_A Aminotransferase class 99.7 1.8E-15 6.1E-20 148.3 18.5 223 83-326 14-276 (418)
136 3fdb_A Beta C-S lyase, putativ 99.7 8.6E-16 3E-20 147.8 15.9 208 103-342 24-248 (377)
137 3n75_A LDC, lysine decarboxyla 99.7 1.1E-16 3.6E-21 168.5 10.0 160 153-329 200-383 (715)
138 2cb1_A O-acetyl homoserine sul 99.7 1.3E-15 4.5E-20 150.0 17.1 153 153-328 61-219 (412)
139 2qma_A Diaminobutyrate-pyruvat 99.7 1.1E-15 3.8E-20 154.2 16.4 200 112-329 110-341 (497)
140 3aow_A Putative uncharacterize 99.7 2.1E-15 7.1E-20 150.5 17.5 235 78-342 53-312 (448)
141 1qz9_A Kynureninase; kynurenin 99.7 4.4E-16 1.5E-20 152.0 12.2 191 111-329 37-244 (416)
142 3t18_A Aminotransferase class 99.6 4.1E-15 1.4E-19 145.5 18.2 222 85-326 15-275 (413)
143 3lws_A Aromatic amino acid bet 99.6 7.7E-16 2.6E-20 147.4 12.5 205 105-341 13-227 (357)
144 1js3_A DDC;, DOPA decarboxylas 99.6 1.2E-15 4.2E-20 153.2 14.5 197 115-329 87-319 (486)
145 2c0r_A PSAT, phosphoserine ami 99.6 2.4E-16 8.1E-21 151.5 8.9 201 104-329 5-212 (362)
146 1c4k_A Protein (ornithine deca 99.6 3E-16 1E-20 165.8 10.5 164 153-329 178-371 (730)
147 1bw0_A TAT, protein (tyrosine 99.6 3.9E-15 1.3E-19 145.7 17.6 197 112-329 49-270 (416)
148 1iay_A ACC synthase 2, 1-amino 99.6 6.4E-15 2.2E-19 145.0 19.2 176 148-342 87-293 (428)
149 2ez2_A Beta-tyrosinase, tyrosi 99.6 2.1E-15 7.3E-20 149.6 15.8 192 113-341 55-279 (456)
150 2zyj_A Alpha-aminodipate amino 99.6 1.7E-15 5.8E-20 147.5 14.6 196 114-342 48-261 (397)
151 3piu_A 1-aminocyclopropane-1-c 99.6 2.5E-15 8.6E-20 148.3 15.6 176 148-342 90-298 (435)
152 1vp4_A Aminotransferase, putat 99.6 2.1E-15 7.2E-20 148.6 14.8 199 114-341 59-282 (425)
153 3op7_A Aminotransferase class 99.6 1.7E-15 5.9E-20 145.9 13.6 167 155-343 70-247 (375)
154 2vyc_A Biodegradative arginine 99.6 2.1E-15 7E-20 160.2 14.7 162 153-329 210-402 (755)
155 2bwn_A 5-aminolevulinate synth 99.6 1.2E-14 3.9E-19 141.6 18.5 188 114-328 61-261 (401)
156 3hdo_A Histidinol-phosphate am 99.6 8.4E-15 2.9E-19 140.7 16.7 203 104-344 28-240 (360)
157 3if2_A Aminotransferase; YP_26 99.6 7E-15 2.4E-19 145.2 16.3 174 148-328 87-291 (444)
158 4f4e_A Aromatic-amino-acid ami 99.6 6E-15 2E-19 145.1 14.7 230 79-326 24-283 (420)
159 1lc5_A COBD, L-threonine-O-3-p 99.6 2.3E-14 8E-19 137.8 18.2 203 104-343 26-242 (364)
160 3tcm_A Alanine aminotransferas 99.6 2.9E-14 1E-18 144.3 19.8 194 114-326 107-332 (500)
161 2x3l_A ORN/Lys/Arg decarboxyla 99.6 8.1E-16 2.8E-20 153.6 7.9 159 153-331 62-229 (446)
162 2r2n_A Kynurenine/alpha-aminoa 99.6 5.4E-14 1.8E-18 138.6 18.5 175 148-342 82-286 (425)
163 3qgu_A LL-diaminopimelate amin 99.6 6.7E-14 2.3E-18 138.5 19.2 204 104-331 71-301 (449)
164 2x5f_A Aspartate_tyrosine_phen 99.6 1.1E-14 3.9E-19 143.2 13.3 217 103-342 48-298 (430)
165 3ei9_A LL-diaminopimelate amin 99.6 1.4E-14 4.8E-19 142.7 13.4 228 80-330 27-288 (432)
166 3ftb_A Histidinol-phosphate am 99.6 5.1E-14 1.8E-18 134.5 16.9 202 103-344 27-242 (361)
167 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 4.7E-15 1.6E-19 148.1 9.8 190 144-349 94-296 (450)
168 3d6k_A Putative aminotransfera 99.6 1.3E-14 4.4E-19 143.0 12.2 226 76-328 7-273 (422)
169 1fg7_A Histidinol phosphate am 99.6 6.5E-14 2.2E-18 134.8 16.5 166 153-343 63-239 (356)
170 7aat_A Aspartate aminotransfer 99.6 3.7E-14 1.3E-18 138.0 14.8 225 83-326 7-264 (401)
171 1yaa_A Aspartate aminotransfer 99.6 1.9E-14 6.5E-19 140.7 12.7 193 113-325 47-267 (412)
172 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 6.6E-15 2.3E-19 146.5 8.2 186 148-350 117-315 (501)
173 3meb_A Aspartate aminotransfer 99.5 1.2E-13 4.3E-18 137.4 17.5 224 81-326 26-293 (448)
174 3fsl_A Aromatic-amino-acid ami 99.5 6.8E-14 2.3E-18 135.6 15.1 196 114-326 45-261 (397)
175 3ihj_A Alanine aminotransferas 99.5 7.6E-14 2.6E-18 141.3 15.8 195 112-326 100-331 (498)
176 3ez1_A Aminotransferase MOCR f 99.5 5.6E-14 1.9E-18 137.9 13.4 222 81-328 5-268 (423)
177 3b1d_A Betac-S lyase; HET: PLP 99.3 8E-16 2.8E-20 149.7 0.0 193 113-329 44-255 (392)
178 3ruy_A Ornithine aminotransfer 99.5 6.2E-14 2.1E-18 136.0 13.1 184 114-328 53-267 (392)
179 1vef_A Acetylornithine/acetyl- 99.5 1.3E-13 4.3E-18 133.9 14.9 195 113-342 61-277 (395)
180 4adb_A Succinylornithine trans 99.5 1.1E-13 3.7E-18 134.6 14.4 191 114-342 56-275 (406)
181 1w23_A Phosphoserine aminotran 99.5 8.2E-15 2.8E-19 140.1 5.4 195 104-329 4-211 (360)
182 2oqx_A Tryptophanase; lyase, p 99.5 1.8E-14 6.3E-19 143.1 7.7 190 116-329 53-281 (467)
183 3f6t_A Aspartate aminotransfer 99.5 1.3E-13 4.5E-18 140.7 14.3 194 115-329 117-330 (533)
184 3k7y_A Aspartate aminotransfer 99.5 2.9E-13 9.9E-18 133.8 16.1 226 81-326 6-263 (405)
185 1ax4_A Tryptophanase; tryptoph 99.5 5.9E-14 2E-18 139.4 11.1 159 154-327 82-279 (467)
186 1s0a_A Adenosylmethionine-8-am 99.5 6.4E-13 2.2E-17 130.8 18.1 209 114-342 60-298 (429)
187 2eh6_A Acoat, acetylornithine 99.5 3.6E-13 1.2E-17 129.5 15.7 193 114-342 45-264 (375)
188 2zy4_A L-aspartate beta-decarb 99.5 1.6E-13 5.4E-18 140.7 13.7 226 83-329 74-332 (546)
189 4eu1_A Mitochondrial aspartate 99.5 2E-13 7E-18 133.4 14.0 226 80-328 17-276 (409)
190 3g7q_A Valine-pyruvate aminotr 99.5 1.1E-13 3.9E-18 134.9 11.6 170 147-328 78-265 (417)
191 1ajs_A Aspartate aminotransfer 99.5 3.6E-13 1.2E-17 131.5 15.1 222 81-326 7-272 (412)
192 3ppl_A Aspartate aminotransfer 99.5 8.8E-13 3E-17 129.7 18.0 159 153-328 83-275 (427)
193 2q7w_A Aspartate aminotransfer 99.5 2.8E-13 9.7E-18 131.2 14.2 190 113-326 44-260 (396)
194 1wyu_A Glycine dehydrogenase ( 99.5 1.8E-13 6.1E-18 135.6 12.8 160 148-329 108-277 (438)
195 3asa_A LL-diaminopimelate amin 99.5 5.9E-13 2E-17 129.8 16.0 220 80-330 4-254 (400)
196 2oat_A Ornithine aminotransfer 99.5 6E-13 2E-17 132.3 15.2 185 114-328 93-308 (439)
197 2ay1_A Aroat, aromatic amino a 99.5 4.2E-13 1.4E-17 130.0 13.8 190 113-326 44-257 (394)
198 1z7d_A Ornithine aminotransfer 99.5 9.9E-13 3.4E-17 130.4 16.4 185 114-328 82-297 (433)
199 1uu1_A Histidinol-phosphate am 99.5 7.6E-13 2.6E-17 125.8 14.9 194 105-343 22-227 (335)
200 3fkd_A L-threonine-O-3-phospha 99.5 1E-12 3.5E-17 125.4 15.4 197 103-344 16-223 (350)
201 1sff_A 4-aminobutyrate aminotr 99.4 1.9E-12 6.4E-17 126.7 15.0 195 113-328 57-283 (426)
202 3a8u_X Omega-amino acid--pyruv 99.4 3E-12 1E-16 126.9 16.2 200 114-342 67-312 (449)
203 2ord_A Acoat, acetylornithine 99.4 1.3E-12 4.5E-17 127.0 13.4 185 114-329 57-268 (397)
204 3nx3_A Acoat, acetylornithine 99.4 4.1E-12 1.4E-16 123.4 16.5 197 114-342 53-272 (395)
205 4h51_A Aspartate aminotransfer 99.4 2.4E-12 8.2E-17 127.9 15.0 231 82-331 23-284 (420)
206 2pb2_A Acetylornithine/succiny 99.4 2.2E-12 7.5E-17 127.2 14.0 184 114-328 74-285 (420)
207 3l44_A Glutamate-1-semialdehyd 99.4 9.2E-12 3.1E-16 122.7 17.8 194 114-341 72-292 (434)
208 2eo5_A 419AA long hypothetical 99.4 8.9E-12 3.1E-16 122.5 17.0 199 115-329 61-298 (419)
209 3i4j_A Aminotransferase, class 99.4 6.3E-12 2.1E-16 123.7 15.7 202 114-342 46-285 (430)
210 3fq8_A Glutamate-1-semialdehyd 99.4 1.7E-11 5.7E-16 120.5 17.8 190 114-341 69-289 (427)
211 2fyf_A PSAT, phosphoserine ami 99.4 2.4E-12 8.2E-17 125.4 11.3 191 103-328 40-237 (398)
212 3dxv_A Alpha-amino-epsilon-cap 99.4 1.1E-11 3.8E-16 122.3 16.1 194 114-328 60-285 (439)
213 2epj_A Glutamate-1-semialdehyd 99.3 1.1E-11 3.9E-16 122.1 15.8 198 114-342 73-294 (434)
214 1zod_A DGD, 2,2-dialkylglycine 99.3 2E-11 6.9E-16 120.0 17.2 205 114-342 60-295 (433)
215 3n5m_A Adenosylmethionine-8-am 99.3 4.3E-11 1.5E-15 118.7 19.4 206 114-341 66-307 (452)
216 3k28_A Glutamate-1-semialdehyd 99.3 2.2E-11 7.6E-16 120.0 16.6 194 114-341 70-290 (429)
217 2cy8_A D-phgat, D-phenylglycin 99.3 1.4E-11 4.9E-16 122.2 14.2 189 113-328 73-284 (453)
218 4e77_A Glutamate-1-semialdehyd 99.3 8.3E-11 2.8E-15 115.7 18.1 197 114-341 70-290 (429)
219 4a6r_A Omega transaminase; tra 99.3 4.5E-11 1.5E-15 119.1 16.0 208 114-341 67-311 (459)
220 3dod_A Adenosylmethionine-8-am 99.3 8.2E-11 2.8E-15 116.7 17.4 201 114-342 61-304 (448)
221 3tfu_A Adenosylmethionine-8-am 99.3 2.9E-11 1E-15 120.9 14.1 199 114-341 92-326 (457)
222 3gju_A Putative aminotransfera 99.3 1.5E-10 5.1E-15 115.3 19.0 209 114-341 68-313 (460)
223 2e7u_A Glutamate-1-semialdehyd 99.2 7.6E-11 2.6E-15 115.8 14.8 197 114-342 69-289 (424)
224 3i5t_A Aminotransferase; pyrid 99.2 8.5E-10 2.9E-14 110.8 20.4 209 114-342 71-315 (476)
225 3hmu_A Aminotransferase, class 99.2 2.5E-10 8.5E-15 114.6 16.4 201 114-341 72-315 (472)
226 3oks_A 4-aminobutyrate transam 99.2 5.1E-10 1.7E-14 111.4 17.9 202 114-328 78-311 (451)
227 2cjg_A L-lysine-epsilon aminot 99.2 1.2E-10 4.3E-15 115.8 12.9 191 114-329 71-312 (449)
228 4ffc_A 4-aminobutyrate aminotr 99.2 6.3E-10 2.2E-14 110.8 17.9 208 114-341 81-316 (453)
229 4ao9_A Beta-phenylalanine amin 99.0 3.3E-09 1.1E-13 106.2 15.6 195 114-342 104-310 (454)
230 2yky_A Beta-transaminase; tran 98.5 5.5E-11 1.9E-15 119.6 0.0 184 114-329 117-316 (465)
231 3bwn_A AT1G70560, L-tryptophan 99.0 8.4E-10 2.9E-14 107.7 8.2 150 148-328 72-234 (391)
232 1ohv_A 4-aminobutyrate aminotr 98.9 4.7E-09 1.6E-13 105.3 12.6 190 114-325 80-338 (472)
233 2hox_A ALLIIN lyase 1; cystein 98.8 1.3E-09 4.3E-14 108.0 4.2 158 147-342 103-276 (427)
234 4atq_A 4-aminobutyrate transam 98.4 3.4E-05 1.1E-09 77.2 21.4 201 114-328 81-310 (456)
235 4e3q_A Pyruvate transaminase; 98.0 5.3E-05 1.8E-09 76.1 13.4 201 114-342 84-329 (473)
236 4a0g_A Adenosylmethionine-8-am 97.9 0.00018 6.2E-09 77.0 15.1 91 241-341 577-687 (831)
237 1zco_A 2-dehydro-3-deoxyphosph 49.1 25 0.00085 31.9 5.7 58 235-292 137-205 (262)
238 1vs1_A 3-deoxy-7-phosphoheptul 47.2 27 0.00094 31.9 5.7 58 235-292 152-220 (276)
239 4gqr_A Pancreatic alpha-amylas 44.4 8.2 0.00028 37.3 1.8 28 260-287 71-98 (496)
240 1vr6_A Phospho-2-dehydro-3-deo 44.0 24 0.00082 33.5 4.9 57 235-291 220-287 (350)
241 3nvt_A 3-deoxy-D-arabino-heptu 44.0 25 0.00084 33.9 5.0 57 235-291 256-323 (385)
242 1vli_A Spore coat polysacchari 42.7 41 0.0014 32.3 6.4 88 235-326 165-265 (385)
243 3ghf_A Septum site-determining 41.3 40 0.0014 26.7 5.1 30 254-283 49-78 (120)
244 1lwj_A 4-alpha-glucanotransfer 38.3 14 0.00046 35.8 2.3 28 260-287 64-91 (441)
245 1xrs_B D-lysine 5,6-aminomutas 37.9 54 0.0019 29.7 6.1 60 223-287 157-223 (262)
246 4aie_A Glucan 1,6-alpha-glucos 37.3 14 0.00049 36.3 2.3 27 261-287 75-101 (549)
247 3bh4_A Alpha-amylase; calcium, 37.0 14 0.00049 36.1 2.2 28 260-287 73-100 (483)
248 1wpc_A Glucan 1,4-alpha-maltoh 36.2 15 0.00052 35.9 2.2 28 260-287 77-104 (485)
249 1g94_A Alpha-amylase; beta-alp 35.9 13 0.00045 36.0 1.7 28 260-287 59-86 (448)
250 2wqp_A Polysialic acid capsule 35.9 41 0.0014 31.8 5.1 90 235-328 155-255 (349)
251 1ud2_A Amylase, alpha-amylase; 35.5 16 0.00054 35.7 2.2 28 260-287 75-102 (480)
252 1y80_A Predicted cobalamin bin 35.1 46 0.0016 28.5 5.0 59 224-287 117-179 (210)
253 1hvx_A Alpha-amylase; hydrolas 34.6 17 0.00057 36.1 2.2 28 260-287 76-103 (515)
254 2yxb_A Coenzyme B12-dependent 34.4 39 0.0013 27.9 4.3 58 224-286 47-107 (161)
255 1ht6_A AMY1, alpha-amylase iso 34.2 18 0.0006 34.6 2.3 28 260-287 63-90 (405)
256 2guy_A Alpha-amylase A; (beta- 34.2 17 0.00058 35.4 2.2 28 260-287 92-119 (478)
257 1mxg_A Alpha amylase; hyperthe 33.8 18 0.0006 35.1 2.2 28 260-287 81-108 (435)
258 3zqu_A Probable aromatic acid 32.4 99 0.0034 26.9 6.7 65 102-166 131-195 (209)
259 3bzy_B ESCU; auto cleavage pro 32.2 23 0.0008 26.3 2.2 20 268-287 29-48 (83)
260 1gcy_A Glucan 1,4-alpha-maltot 32.1 19 0.00065 35.8 2.2 28 260-287 87-114 (527)
261 2ab1_A Hypothetical protein; H 31.3 1.1E+02 0.0037 24.2 6.2 50 237-287 48-97 (122)
262 2aaa_A Alpha-amylase; glycosid 31.1 19 0.00064 35.2 1.9 28 260-287 92-119 (484)
263 1wza_A Alpha-amylase A; hydrol 30.8 16 0.00056 35.7 1.5 27 261-287 77-103 (488)
264 3q58_A N-acetylmannosamine-6-p 30.6 1.2E+02 0.004 26.6 6.9 66 239-311 90-156 (229)
265 3igs_A N-acetylmannosamine-6-p 30.2 1.2E+02 0.0041 26.6 6.9 66 239-311 90-156 (232)
266 2dh2_A 4F2 cell-surface antige 30.2 17 0.00059 35.1 1.5 28 260-287 76-103 (424)
267 1zja_A Trehalulose synthase; s 29.5 23 0.00078 35.5 2.3 27 261-287 75-101 (557)
268 1qho_A Alpha-amylase; glycosid 29.0 23 0.00079 36.4 2.3 28 260-287 102-129 (686)
269 2z1k_A (NEO)pullulanase; hydro 28.9 18 0.0006 35.3 1.3 27 261-287 92-118 (475)
270 1cyg_A Cyclodextrin glucanotra 28.9 23 0.0008 36.4 2.3 28 260-287 106-133 (680)
271 3edf_A FSPCMD, cyclomaltodextr 28.9 24 0.00081 35.8 2.3 27 261-287 194-220 (601)
272 1d3c_A Cyclodextrin glycosyltr 28.2 24 0.00083 36.3 2.3 28 260-287 110-137 (686)
273 1jae_A Alpha-amylase; glycosid 27.7 17 0.00057 35.6 0.9 27 261-287 70-96 (471)
274 3bmv_A Cyclomaltodextrin gluca 27.7 25 0.00086 36.1 2.3 28 260-287 111-138 (683)
275 2vt1_B Surface presentation of 26.6 33 0.0011 26.1 2.2 20 268-287 29-48 (93)
276 2wc7_A Alpha amylase, catalyti 26.4 17 0.00059 35.5 0.7 26 262-287 99-124 (488)
277 1ccw_A Protein (glutamate muta 26.3 46 0.0016 26.6 3.2 58 224-286 32-92 (137)
278 3aj7_A Oligo-1,6-glucosidase; 26.3 28 0.00095 35.2 2.3 27 261-287 83-109 (589)
279 1j0h_A Neopullulanase; beta-al 26.1 28 0.00097 35.0 2.3 28 260-287 217-244 (588)
280 3dhu_A Alpha-amylase; structur 25.9 22 0.00075 34.3 1.3 26 262-287 80-105 (449)
281 1m53_A Isomaltulose synthase; 25.5 22 0.00075 35.7 1.3 26 262-287 89-114 (570)
282 2lbw_A H/ACA ribonucleoprotein 25.4 1.5E+02 0.0053 23.1 6.1 49 241-291 26-76 (121)
283 3t7y_A YOP proteins translocat 25.4 33 0.0011 26.3 2.0 20 268-287 44-63 (97)
284 3c01_E Surface presentation of 24.9 34 0.0012 26.3 2.0 20 268-287 29-48 (98)
285 1wzl_A Alpha-amylase II; pullu 24.8 28 0.00096 35.0 1.9 28 260-287 214-241 (585)
286 1uok_A Oligo-1,6-glucosidase; 24.8 23 0.0008 35.4 1.3 27 261-287 74-100 (558)
287 3bc9_A AMYB, alpha amylase, ca 24.6 27 0.00092 35.5 1.8 28 260-287 203-230 (599)
288 4aef_A Neopullulanase (alpha-a 24.3 24 0.00081 36.0 1.3 26 262-287 282-307 (645)
289 1ua7_A Alpha-amylase; beta-alp 24.3 22 0.00076 34.1 1.0 27 261-287 70-96 (422)
290 1g5a_A Amylosucrase; glycosylt 23.7 33 0.0011 35.0 2.3 28 260-287 157-184 (628)
291 3v7e_A Ribosome-associated pro 23.6 63 0.0021 23.5 3.2 45 240-286 16-60 (82)
292 2rdx_A Mandelate racemase/muco 23.3 78 0.0027 29.7 4.7 50 237-286 246-295 (379)
293 2ze0_A Alpha-glucosidase; TIM 22.8 26 0.0009 35.0 1.3 26 262-287 75-100 (555)
294 2zic_A Dextran glucosidase; TI 22.7 24 0.00084 35.1 1.0 26 262-287 75-100 (543)
295 3i4k_A Muconate lactonizing en 22.5 1E+02 0.0035 29.1 5.3 50 237-286 254-303 (383)
296 1ea9_C Cyclomaltodextrinase; h 22.1 30 0.001 34.8 1.6 27 261-287 214-240 (583)
297 2i2x_B MTAC, methyltransferase 21.8 1.1E+02 0.0039 27.0 5.3 58 224-286 152-211 (258)
298 3ezx_A MMCP 1, monomethylamine 21.7 75 0.0026 27.5 3.9 59 223-286 120-184 (215)
299 4aee_A Alpha amylase, catalyti 21.3 30 0.001 35.7 1.3 25 263-287 309-333 (696)
300 1sjd_A N-acylamino acid racema 20.8 95 0.0032 28.9 4.7 48 237-284 242-289 (368)
301 3q45_A Mandelate racemase/muco 20.4 98 0.0033 29.0 4.7 51 236-286 243-293 (368)
302 3zss_A Putative glucanohydrola 20.0 44 0.0015 34.7 2.3 24 264-287 319-342 (695)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=1.3e-71 Score=550.31 Aligned_cols=281 Identities=62% Similarity=1.025 Sum_probs=231.8
Q ss_pred chhcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHH
Q 018300 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (358)
Q Consensus 77 ~~~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~ 156 (358)
+...+.|++.||+++++|++|+.||+++|+||||||++|+.|+++++++|+|+|+|||||+|||+|++++|++|.+|++|
T Consensus 29 ~~~~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~r 108 (490)
T 3ou5_A 29 WTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRR 108 (490)
T ss_dssp CSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHH
T ss_pred cccccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHH
Confidence 33467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC
Q 018300 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (358)
Q Consensus 157 la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (358)
++++||+++++|+|||++.||+.||++++.++++|||+||.+++.+|||++|++.+....+.++|.+|+.++|++|++++
T Consensus 109 ak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~ 188 (490)
T 3ou5_A 109 ALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG 188 (490)
T ss_dssp HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTT
T ss_pred HHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999866555678889999999999999999
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcC
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L 316 (358)
.||||++++++.+++||+|+++.|.|++.+|++++++||+++|++|++|+||.+||+++|.+|+|+++||++++||||+|
T Consensus 189 ~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTL 268 (490)
T 3ou5_A 189 LIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTL 268 (490)
T ss_dssp EECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTT
T ss_pred cccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcEEEEEEeCCCC---------chhHHHHHHhhccCCccccccccccc
Q 018300 317 RGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 317 ~Gp~GG~I~~~~~~~---------~~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
+|||||+|+++++.. ..+++.++|++++|||+|||||+|+|
T Consensus 269 rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~I 318 (490)
T 3ou5_A 269 RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAI 318 (490)
T ss_dssp CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHH
T ss_pred cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHH
Confidence 999999999998521 12368899999999999999999986
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=4.6e-50 Score=407.16 Aligned_cols=278 Identities=63% Similarity=1.046 Sum_probs=215.8
Q ss_pred cccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~ 159 (358)
.++|+++||++|++|++|+.||++.|+||+|||++|+.|++|+.+.+.++|++|||++|||+|+++++++|+++++++++
T Consensus 32 ~~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~ 111 (490)
T 2a7v_A 32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHH
T ss_pred cchhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCC
Q 018300 160 AFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 239 (358)
Q Consensus 160 lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD 239 (358)
+||+++++|+++|+++|||.||.+++.++++|||+|+++++.|+||++|+++...+.+.+.|..++.++++++++++.+|
T Consensus 112 l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD 191 (490)
T 2a7v_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID 191 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBC
T ss_pred HcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcC
Confidence 99999877766788889999999999999999999999999999999987644333445667767778888887788999
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccC
Q 018300 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP 319 (358)
Q Consensus 240 ~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp 319 (358)
+++|++.+..++||+|+++.++||+..|+++|+++|+++|++|++|++|++|+++.|..+.+++++|++++|+||+|+||
T Consensus 192 ~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp 271 (490)
T 2a7v_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 271 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSC
T ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccc
Confidence 99999998766899999998999999999999999999999999999999999888877777789999999999999999
Q ss_pred cEEEEEEeCCCC---------chhHHHHHHhhccCCccccccccccc
Q 018300 320 RGGMIFFKKDPV---------LGVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 320 ~GG~I~~~~~~~---------~~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
+||+|+++++.+ .++++.++++..+|++.|++|+.|.+
T Consensus 272 ~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~i 318 (490)
T 2a7v_A 272 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAI 318 (490)
T ss_dssp SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHH
T ss_pred cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHH
Confidence 999999998521 01257889999999999999998864
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=2.1e-44 Score=364.59 Aligned_cols=282 Identities=64% Similarity=1.022 Sum_probs=246.1
Q ss_pred cchhcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHH
Q 018300 76 SSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (358)
Q Consensus 76 ~~~~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~ 155 (358)
+.+++++++++||++++++++|..+|++.|+|++++|++|+.|++++.+.+.++|++|||+++||+|++.++++|+.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~ 97 (483)
T 1rv3_A 18 EQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQK 97 (483)
T ss_dssp HHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHH
T ss_pred HHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHH
Confidence 45566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC
Q 018300 156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (358)
Q Consensus 156 ~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 235 (358)
+++++||+++++|.++|+++||+.||.+++.++++|||+|+++++.|++|++|++......+.+.|..++.+++++++++
T Consensus 98 ~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~ 177 (483)
T 1rv3_A 98 RALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDT 177 (483)
T ss_dssp HHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTT
T ss_pred HHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCC
Confidence 99999999976665678999999999999999999999999999999999988764322234455655678888888778
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCc
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKS 315 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~ 315 (358)
+.+|+++|++.+...+||+|+++.++++...|+++|+++|+++|++|++|++|+.|++..+..+.|++++|++++|+||+
T Consensus 178 ~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~ 257 (483)
T 1rv3_A 178 GYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKT 257 (483)
T ss_dssp CSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGG
T ss_pred CcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCccc
Confidence 89999999999975689999887777788899999999999999999999999999988777667777899999999999
Q ss_pred CccCcEEEEEEeCCCCc---------hhHHHHHHhhccCCccccccccccc
Q 018300 316 LRGPRGGMIFFKKDPVL---------GVELESAINNAVFPGLQVGFVSYVF 357 (358)
Q Consensus 316 L~Gp~GG~I~~~~~~~~---------~~~~~~~i~~~~f~g~q~~~~~~~~ 357 (358)
|+||+||+|+++++.+. .+++.++++...|++.|++|+.|.+
T Consensus 258 l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~i 308 (483)
T 1rv3_A 258 LRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAI 308 (483)
T ss_dssp GCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHH
T ss_pred CCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHH
Confidence 99999999999985220 0136678888889999999988753
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-36 Score=300.97 Aligned_cols=262 Identities=51% Similarity=0.799 Sum_probs=227.5
Q ss_pred hcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la 158 (358)
..++++.++|++++.+.+|..++.+.++|++++|+++|.|++++.+.+.++|.+|||+.+|+.|++..+.+|+.++++++
T Consensus 22 ~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la 101 (447)
T 3h7f_A 22 MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAK 101 (447)
T ss_dssp GGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHH
Confidence 35778999999999999999999999999999999999999999999888999999999999999999999988879999
Q ss_pred HHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCC
Q 018300 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (358)
Q Consensus 159 ~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 238 (358)
+++|++. ++++++||+.|+..++.++++|||+|+++++.|++|+.++. .+...|..+..++++++++++.+
T Consensus 102 ~~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~ 172 (447)
T 3h7f_A 102 ALFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATHLI 172 (447)
T ss_dssp HHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHSSEEEEECCCTTTCSC
T ss_pred HHcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh-----hhhhcCCeeEEEEcCcCcccCCc
Confidence 9999986 45668899999999999999999999999998888776653 22334444566777777667889
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCcc
Q 018300 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (358)
Q Consensus 239 D~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~G 318 (358)
|++++++.+...++++|+++.++++...|+++|+++|+++|++|++|++|+.|+...+..+.+++++|++++|+||+|+|
T Consensus 173 d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G 252 (447)
T 3h7f_A 173 DMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGG 252 (447)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCC
T ss_pred CHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCC
Confidence 99999999876689999998788888889999999999999999999999999877776666667899999999999999
Q ss_pred CcEEEEEEeCCCCchhHHHHHHhhccCCccccccccc
Q 018300 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQVGFVSY 355 (358)
Q Consensus 319 p~GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~~ 355 (358)
|+||++++++ ++.++++...+++.+++|..+
T Consensus 253 ~~gG~i~~~~------~~~~~l~~~~~~~~~~~~~~~ 283 (447)
T 3h7f_A 253 GRSGLIVGKQ------QYAKAINSAVFPGQQGGPLMH 283 (447)
T ss_dssp CSCEEEEECG------GGHHHHHHHHTTTTCSSCCHH
T ss_pred CCeEEEEECH------HHHHHHhhhcCCcccCCccHH
Confidence 9999999987 567778887788888887654
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=2.2e-34 Score=282.07 Aligned_cols=260 Identities=52% Similarity=0.841 Sum_probs=215.3
Q ss_pred ccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~l 160 (358)
.+++.+||++++.+.+|..++.+.+.|++++|++++.|++++.+.+.+.|..||++.++|.+....+++|+.++++++++
T Consensus 4 ~~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 83 (417)
T 3n0l_A 4 MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKL 83 (417)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHH
Confidence 46789999999999999998889999999999999999999999888888889999899999999999999899999999
Q ss_pred cCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCH
Q 018300 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (358)
Q Consensus 161 fg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~ 240 (358)
+|++++ +|+++|||+|+..++.++++|||+|++.++.|+++..++. .+...|..++.++++++ +++.+|+
T Consensus 84 ~g~~~~----~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~ 153 (417)
T 3n0l_A 84 FNCKFA----NVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGA-----KVSSSGKMYESCFYGVE-LDGRIDY 153 (417)
T ss_dssp HTCSEE----ECCCSSHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCH
T ss_pred hCCCCc----ceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhh-----hhhhhcceeeeEeccCC-CCCCcCH
Confidence 999763 5778999999999999999999999999998887765443 22344555566777776 5678999
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCc
Q 018300 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (358)
Q Consensus 241 d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~ 320 (358)
++|++.+...++++|++..+++|...|+++|.++|+++|+++++|++|+.|+...+..+.++.++|++++|+||+|+||+
T Consensus 154 ~~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~ 233 (417)
T 3n0l_A 154 EKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPR 233 (417)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCS
T ss_pred HHHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCC
Confidence 99999987558999998877889999999999999999999999999999988776655566678999999999999999
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCccccccccc
Q 018300 321 GGMIFFKKDPVLGVELESAINNAVFPGLQVGFVSY 355 (358)
Q Consensus 321 GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~~ 355 (358)
||+++++++ ++.+++....+++..++|+.+
T Consensus 234 ~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 263 (417)
T 3n0l_A 234 GGIIMTNDE-----ELAKKINSAIFPGIQGGPLMH 263 (417)
T ss_dssp CEEEEESCH-----HHHHHHHHHHTTTTCSSCCHH
T ss_pred eeEEEECCH-----HHHHHHhhhhCCcccCCcHHH
Confidence 999999854 788888887777777776643
No 6
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.7e-32 Score=267.56 Aligned_cols=263 Identities=52% Similarity=0.809 Sum_probs=197.7
Q ss_pred hhcccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 78 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 78 ~~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
++..++..++|+++..+.++..++.+.+++++++|+.+|.|++++...+.+.|..|+++.+|+.+....+.+++.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 87 (425)
T 3ecd_A 8 FFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERV 87 (425)
T ss_dssp HHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHH
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHH
Confidence 46778999999999999998888888999999999999999999999888888889998888888776667788788889
Q ss_pred HHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCC
Q 018300 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (358)
Q Consensus 158 a~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (358)
++++|.+. +.++++||++|+..++.++++|||+|++.++.|++++.++. .....+..++.++++++++++.
T Consensus 88 ~~~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~ 158 (425)
T 3ecd_A 88 KRLFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDTML 158 (425)
T ss_dssp HHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTTSS
T ss_pred HHHhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCcccCc
Confidence 99999886 34567899999999999999999999999988877544432 1224455556677777766778
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCc
Q 018300 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 317 (358)
Q Consensus 238 iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~ 317 (358)
+|+++|++.+...++++|++..+++|...++++|.++|+++|++|++|++|+.|+...+..+.+++.+|++++|+||+|+
T Consensus 159 ~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~ 238 (425)
T 3ecd_A 159 IDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLR 238 (425)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGC
T ss_pred cCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccC
Confidence 99999999987568999998878889999999999999999999999999999987666544445568999999999999
Q ss_pred cCcEEEEEEeCCCCchhHHHHHHhhccCCcccccccc
Q 018300 318 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQVGFVS 354 (358)
Q Consensus 318 Gp~GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~ 354 (358)
||+||+++++++ ++.+++....+++.+++|..
T Consensus 239 g~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 270 (425)
T 3ecd_A 239 GPRGGFVLTNDE-----EIAKKINSAVFPGLQGGPLM 270 (425)
T ss_dssp CCSCEEEEESCH-----HHHHHHHHHHC-----CCCH
T ss_pred CCCcEEEEeCCH-----HHHHHHHhhhCccccCCccH
Confidence 999999999875 67788877777777666554
No 7
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=100.00 E-value=2.6e-32 Score=267.20 Aligned_cols=259 Identities=51% Similarity=0.809 Sum_probs=195.8
Q ss_pred ccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC
Q 018300 83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (358)
Q Consensus 83 l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg 162 (358)
+++++|+++++++++..++.+.+.+++++|+++|.|++++...+.+.+..||++.+++.+....+.+++.+++++++++|
T Consensus 11 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 90 (420)
T 3gbx_A 11 IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG 90 (420)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC
Confidence 78999999999999998888999999999999999999999988788888999988888887777888888899999999
Q ss_pred CCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHH
Q 018300 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (358)
Q Consensus 163 ~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~ 242 (358)
++++ .|+++||++|+..++.++++|||+|++.++.|+++..++. .+...+..+..++++++ +++.+|+++
T Consensus 91 ~~~~----~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~~~ 160 (420)
T 3gbx_A 91 ADYA----NVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGS-----PVNFSGKLYNIVPYGID-ESGKIDYDE 160 (420)
T ss_dssp CSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-TTCSCCHHH
T ss_pred CCCc----eeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccch-----hhhhcccceeEEeccCC-ccCCcCHHH
Confidence 9763 5667899999999999999999999999988877654432 22233444566666676 467899999
Q ss_pred HHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcEE
Q 018300 243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322 (358)
Q Consensus 243 le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~GG 322 (358)
|++.++..++++|++..+++|...|+++|.++|+++|++|++|++|+.|+...+..+..+..+|++++|+||+|+||+||
T Consensus 161 l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gg 240 (420)
T 3gbx_A 161 MAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 240 (420)
T ss_dssp HHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSCE
T ss_pred HHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCce
Confidence 99998776799999977888999999999999999999999999999888766655555557999999999999999999
Q ss_pred EEEEeCCCCchhHHHHHHhhccCCcccccccc
Q 018300 323 MIFFKKDPVLGVELESAINNAVFPGLQVGFVS 354 (358)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~~ 354 (358)
+++++++. .++.++++...+++.+++|..
T Consensus 241 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 269 (420)
T 3gbx_A 241 LILAKGGD---EELYKKLNSAVFPSAQGGPLM 269 (420)
T ss_dssp EEEESSCC---HHHHHHHHHHHC----CCCCH
T ss_pred EEEEcCCc---HHHHHHhhhhcCCCCCCCcch
Confidence 99998721 157777777777777666543
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=3.3e-29 Score=244.31 Aligned_cols=256 Identities=52% Similarity=0.879 Sum_probs=201.2
Q ss_pred ccccccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~l 160 (358)
+.+.++||+++..+.++..++.+.+.+.+++++.++.|++++...+.+++..||++.+++.|.+...++|+.++++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~ 81 (405)
T 2vi8_A 2 KYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQL 81 (405)
T ss_dssp CSHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 34677899999999998888877777788999999999999998886677677888887878777788998889999999
Q ss_pred cCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCH
Q 018300 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (358)
Q Consensus 161 fg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~ 240 (358)
+|+++ ..++++||+.|+..++.++++|||+|+++++.|+++..... .+...|..+++++++++++++.+|+
T Consensus 82 ~g~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~ 152 (405)
T 2vi8_A 82 FGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDY 152 (405)
T ss_dssp HTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-----TTSHHHHHSEEEEECBCTTTCSBCH
T ss_pred hCCCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-----hhhhccceeEEEecccccccCCcCH
Confidence 99985 24567899999999999999999999999887766533211 1123343335666666655678999
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCc
Q 018300 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (358)
Q Consensus 241 d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~ 320 (358)
+++++.++..++++|+++.++++...|+++|.++|+++|+++++|++|+.|....+..+..++++|++++|+||+|+||.
T Consensus 153 ~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~ 232 (405)
T 2vi8_A 153 DDVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPR 232 (405)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCS
T ss_pred HHHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCC
Confidence 99999887557899988767788878999999999999999999999997765444333333468999999999999888
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCccccc
Q 018300 321 GGMIFFKKDPVLGVELESAINNAVFPGLQVG 351 (358)
Q Consensus 321 GG~I~~~~~~~~~~~~~~~i~~~~f~g~q~~ 351 (358)
||++++++ ++.+++.....++..++
T Consensus 233 gG~~~~~~------~~~~~l~~~~~~~~~~~ 257 (405)
T 2vi8_A 233 GGMILCQE------QFAKQIDKAIFPGIQGG 257 (405)
T ss_dssp CEEEEECH------HHHHHHHHHHTTTTCSS
T ss_pred CeEEEEcH------HHHHHHHhhhcccccCC
Confidence 99999885 66666666544444444
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.96 E-value=6.3e-29 Score=242.47 Aligned_cols=256 Identities=51% Similarity=0.827 Sum_probs=202.5
Q ss_pred cccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC
Q 018300 84 GEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 163 (358)
Q Consensus 84 ~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~ 163 (358)
...||++++.++++..++...+++..++++.++.|++++...+.+.+..+||+.+++.|.+..+.+|+.+++++++++|+
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~ 84 (407)
T 2dkj_A 5 LKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA 84 (407)
T ss_dssp -CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC
Confidence 45689999999999988888899999999999999999998886656667887777767776677888788899999999
Q ss_pred CCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHH
Q 018300 164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (358)
Q Consensus 164 ~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~l 243 (358)
++ .+++++||+.|+..++.++++|||+|+++++.|+++..... .+...|..++.++++++++++.+|++++
T Consensus 85 ~~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l 155 (407)
T 2dkj_A 85 AW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGS-----RVNFSGKLYKVVSYGVRPDTELIDLEEV 155 (407)
T ss_dssp SE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECCCTTTSSCCHHHH
T ss_pred Cc----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHH-----HHHhcCceEEEEecCCCcccCccCHHHH
Confidence 76 35677899999999999999999999999987766532111 2233454445566665555678999999
Q ss_pred HHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcEEE
Q 018300 244 EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGM 323 (358)
Q Consensus 244 e~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~GG~ 323 (358)
++.++..++++|++..+++|...|+++|.++|+++|+++++|++|+.|+...+....+++.+|++++|+||+|+|++||+
T Consensus 156 ~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~ 235 (407)
T 2dkj_A 156 RRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGL 235 (407)
T ss_dssp HHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEE
T ss_pred HHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceE
Confidence 99987557899988767788889999999999999999999999998776555433334468999999999999999999
Q ss_pred EEEeCCCCchhHHHHHHhhccCCccccccc
Q 018300 324 IFFKKDPVLGVELESAINNAVFPGLQVGFV 353 (358)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~~~f~g~q~~~~ 353 (358)
++++++ ++.+++.....++..+++.
T Consensus 236 ~~~~~~-----~~~~~l~~~~~~~~~~~~~ 260 (407)
T 2dkj_A 236 ILSNDP-----ELGKRIDKLIFPGIQGGPL 260 (407)
T ss_dssp EEESCH-----HHHHHHHHHHTTTTCSSCC
T ss_pred EEECCH-----HHHHHHHhhhcccccCCCc
Confidence 999843 6767776654444444443
No 10
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.91 E-value=2.5e-23 Score=207.56 Aligned_cols=235 Identities=19% Similarity=0.165 Sum_probs=171.0
Q ss_pred ccChHHH---HHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhccc----CCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 85 EADPEVC---EIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 85 ~~d~~~~---~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~----~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
.+++++. +.+++|..+|+..++.|+++|. +.|++++.+...... .+||++.| ...+++| +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~~-----~g~~~Le----~~l 83 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYND-----IGRDSLD----RVY 83 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTTC-----HHHHHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCCc-----hhHHHHH----HHH
Confidence 5577777 6667788888899999999997 799999988644322 34454433 2344555 458
Q ss_pred HHHcCCCCCCCcceEE--eCCCHHHHHHHHHHhccCCCEEEecC-CCCCccccc--ccccch-hccccCCceEEEEecee
Q 018300 158 LAAFNLDENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSH--GFMTPK-RRVSGTSIYFESMPYRL 231 (358)
Q Consensus 158 a~lfg~~~~~~~v~V~--~~SGt~A~~~a~~all~pGD~Vl~~~-~~~ggh~s~--~~~~~~-~~~~~~g~~~~~~~~~~ 231 (358)
++++|.+.+ .++ ++||+.||..++.++++|||+|++.+ +.|+++... +....+ ..+...|. ++..++.
T Consensus 84 A~l~g~e~a----lv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~--~~~~v~~ 157 (427)
T 3hvy_A 84 ANIFNTESA----FVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGV--KYKMVDL 157 (427)
T ss_dssp HHHHTCSEE----EEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTC--EEEECCC
T ss_pred HHHhCCCce----EEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCC--EEEEecC
Confidence 999999873 444 68999999999999999999999998 777664310 000000 01223455 4455555
Q ss_pred cCCCCCCCHHHHHHHhhh-cCCeEEEEcC----CCCC--CCCCHHHHHHHHHH--cCCEEEEeccccccccccCCccCCC
Q 018300 232 DESTGLVDYDMLEKTAIL-FRPKLIIAGA----SAYP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF 302 (358)
Q Consensus 232 ~~~~~~iD~d~le~~i~~-~~~klIi~~~----s~~~--~~~dl~~I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl 302 (358)
+++.+|++++++.+++ .++|+|++.. ++++ ...|+++|+++|++ +|+++++|++|+.+.. ...|+
T Consensus 158 --~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~----~~~p~ 231 (427)
T 3hvy_A 158 --KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVE----EKEPT 231 (427)
T ss_dssp --BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTS----SSCGG
T ss_pred --CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCcccccc----CCCCc
Confidence 3678999999999874 4789999877 5554 45789999999999 8999999999976642 12455
Q ss_pred C-CCcEEEEcCcCcCcc---CcEEEEEEeCCCCchhHHHHHHhhc-cCCcc
Q 018300 303 K-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNA-VFPGL 348 (358)
Q Consensus 303 ~-gaDiv~~S~hK~L~G---p~GG~I~~~~~~~~~~~~~~~i~~~-~f~g~ 348 (358)
+ ++|++++|+||+|+| |.||+|++++ ++.+++... ..+++
T Consensus 232 ~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~------~li~~l~~~~~~~~~ 276 (427)
T 3hvy_A 232 DVGADIIAGSLIKNIGGGIATTGGYIAGKE------EYVTQATFRVTVPGI 276 (427)
T ss_dssp GGTCSEEEEETTSGGGTTTCCSCEEEEECH------HHHHHHHHHHSCTTT
T ss_pred ccCCeEEEECCcccccccccceEEEEEECH------HHHHHHHHHhhcCCc
Confidence 6 899999999999987 8899999986 677777663 33443
No 11
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.89 E-value=3.5e-22 Score=199.31 Aligned_cols=230 Identities=17% Similarity=0.128 Sum_probs=166.5
Q ss_pred ccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhc--cc--CCCCCCCcCCCCcHHHHHHHHHHHHHHHHH
Q 018300 85 EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTN--KY--SEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (358)
Q Consensus 85 ~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~--~~--~~G~pg~r~~~G~~~~~~lE~~~~~~la~l 160 (358)
+-..++++.++++..++...++.+++.|. +.|++++...... .+ ++||.+ +....+++|+ +++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~~~gy~y-----~~~~~~~Le~----~lA~l 85 (427)
T 3i16_A 17 DRVLKLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHFTNSSGYGY-----GDIGRDSLDA----VYARV 85 (427)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCT-----TCHHHHHHHH----HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhcCCCCCCCC-----CHHHHHHHHH----HHHHH
Confidence 44556778888888889999999999887 6899998764211 11 233332 3333455554 58999
Q ss_pred cCCCCCCCcceEE--eCCCHHHHHHHHHHhccCCCEEEecC-CCCCcccccc-cccc--hhccccCCceEEEEeceecCC
Q 018300 161 FNLDENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHG-FMTP--KRRVSGTSIYFESMPYRLDES 234 (358)
Q Consensus 161 fg~~~~~~~v~V~--~~SGt~A~~~a~~all~pGD~Vl~~~-~~~ggh~s~~-~~~~--~~~~~~~g~~~~~~~~~~~~~ 234 (358)
+|++.+ .++ ++||+.||..++.++++|||+|++.+ +.|+++.... .... ...+...|. ++..+++++
T Consensus 86 ~g~e~a----lv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~--~~~~v~~~~- 158 (427)
T 3i16_A 86 FNTESA----LVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGI--NYKQVDLKE- 158 (427)
T ss_dssp HTCSEE----EEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTC--EEEECCCCT-
T ss_pred hCCcce----EEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCC--EEEEecCcc-
Confidence 999873 344 78999999999999999999999998 7776653100 0000 001223354 555666653
Q ss_pred CCCCCHHHHHHHhhh-cCCeEEEEcC----CCCC--CCCCHHHHHHHHHH--cCCEEEEeccccccccccCCccCCCC-C
Q 018300 235 TGLVDYDMLEKTAIL-FRPKLIIAGA----SAYP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-Y 304 (358)
Q Consensus 235 ~~~iD~d~le~~i~~-~~~klIi~~~----s~~~--~~~dl~~I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl~-g 304 (358)
++.+|++++++.++. .++|+|++.. ++++ ...|+++|+++|++ +|+++++|++|+.+.. ...|++ +
T Consensus 159 ~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~----~~~p~~~g 234 (427)
T 3i16_A 159 DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMD----TKEPTDVG 234 (427)
T ss_dssp TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSS----SSCGGGGT
T ss_pred CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccc----cCCccccC
Confidence 578999999999873 4789998876 4544 46789999999999 9999999999986542 124555 8
Q ss_pred CcEEEEcCcCcCcc---CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 305 CDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 305 aDiv~~S~hK~L~G---p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+|++++|+||+++| +.||+|++++ ++.+++..
T Consensus 235 aDiv~~S~sK~lgg~g~~~gG~i~~~~------~li~~l~~ 269 (427)
T 3i16_A 235 ADLIAGSLIKNIGGGIAPTGGYLAGTK------DCIEKTSY 269 (427)
T ss_dssp CSEEEEETTSGGGTTTCCSCEEEEECH------HHHHHHHH
T ss_pred CeEEEecCcccCCCCCCceEEEEEECH------HHHHHHHH
Confidence 99999999999987 8899999987 56676665
No 12
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.86 E-value=1.4e-20 Score=186.74 Aligned_cols=230 Identities=18% Similarity=0.131 Sum_probs=160.5
Q ss_pred hHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCC
Q 018300 88 PEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK 167 (358)
Q Consensus 88 ~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~ 167 (358)
.++++.++++..++...++.++..|. ..|+++|..........+. ...|..+....+++|+ ++++++|.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~n~--~~vl~a~~~~~~~~~~~~~-~~~~~y~~~~~~~Le~----~lA~l~g~e~a- 77 (409)
T 3jzl_A 6 QAIRKKVETQIDDLQNKTDEIAEFNQ--AKVLDAFQENKVSDFHFHP-STGYGYDDEGRDTLER----VYATVFKTEAA- 77 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGGCC-CCTTCTTCHHHHHHHH----HHHHHHTCSEE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhhhhhccCC-CcCCCCChhHHHHHHH----HHHHHhCCCcE-
Confidence 35677788888888888888888885 6889988765422111111 1112223344445554 58899999863
Q ss_pred CcceEE--eCCCHHHHHHHHHHhccCCCEEEecC-CCCCcccccccc-c-chhccccCCceEEEEeceecCCCCCCCHHH
Q 018300 168 WGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGFM-T-PKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (358)
Q Consensus 168 ~~v~V~--~~SGt~A~~~a~~all~pGD~Vl~~~-~~~ggh~s~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~ 242 (358)
.++ ++||+.|+..++.++++|||+|++.+ +.|++.....-. . ....+...|. ++..+++++ ++.+|+++
T Consensus 78 ---lv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~--~~~~v~~~~-~g~~d~e~ 151 (409)
T 3jzl_A 78 ---LVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHI--GYSSVPLLE-NGDVDFPR 151 (409)
T ss_dssp ---EEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTC--EEEECCCCT-TSCCCHHH
T ss_pred ---EEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCC--EEEEeCCCC-CCCcCHHH
Confidence 444 68999999999999999999999987 666654310000 0 0001223454 555666653 57899999
Q ss_pred HHHHhhhcCCeEEEEcC----CCC--CCCCCHHHHHHHHHH--cCCEEEEeccccccccccCCccCCCC-CCcEEEEcCc
Q 018300 243 LEKTAILFRPKLIIAGA----SAY--PRDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH 313 (358)
Q Consensus 243 le~~i~~~~~klIi~~~----s~~--~~~~dl~~I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~h 313 (358)
+++.++. ++|+|++.. +++ +...|+++|.++|++ +|+++++|++|+.+... ..+++ ++|++++|+|
T Consensus 152 l~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~----~~p~~~g~Div~~S~s 226 (409)
T 3jzl_A 152 IAKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEY----QEPPEVGADIIAGSLI 226 (409)
T ss_dssp HHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSS----CCSGGGTCSEEEEETT
T ss_pred HHHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccccc----CCccccCCeEEEECcc
Confidence 9999864 789998876 444 456789999999999 99999999998765421 23555 8999999999
Q ss_pred CcCcc---CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 314 KSLRG---PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 314 K~L~G---p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|+++| +.||+|++++ ++.+++..
T Consensus 227 K~lgg~~~~~GG~v~~~~------~li~~l~~ 252 (409)
T 3jzl_A 227 KNPGGGLAKTGGYIAGKE------ALVDLCGY 252 (409)
T ss_dssp SGGGTTTCSSCEEEEECH------HHHHHHHH
T ss_pred ccCCccCCceEEEEEeCH------HHHHHHHH
Confidence 99976 5689999986 56666655
No 13
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.84 E-value=3.7e-20 Score=184.77 Aligned_cols=235 Identities=18% Similarity=0.153 Sum_probs=162.1
Q ss_pred cccChHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHhhhhhccc-CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC
Q 018300 84 GEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (358)
Q Consensus 84 ~~~d~~~~~~i~~e~~~~~~~i~lias~n~~s~~V~~al~~~l~~~~-~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg 162 (358)
.+..+++.+.++++..++...++.+...| .+.|++++........ ..+..+ |..+.... +.+++++++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n--~~~vl~A~~~~~~~~~~~~~~~g--~~y~~~~~----~~l~~~la~~~g 79 (431)
T 3ht4_A 8 GEKIAPIVKEVESQITEVHKRADEVIESN--QFRVLESFGKHKISDSHFIPTTG--YGYDDIGR----DTLEKVYADVFG 79 (431)
T ss_dssp TTTSHHHHHHHHHHTHHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGSCCCCT--TCCSCHHH----HHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhchhhhhcCCCCC--CCCChhhH----HHHHHHHHHHhC
Confidence 44556677777788888888889887777 4688888876422111 111122 22233433 335566899999
Q ss_pred CCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecC-CCCCcccccccccc--hhccccCCceEEEEeceecCCCCCCC
Q 018300 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGFMTP--KRRVSGTSIYFESMPYRLDESTGLVD 239 (358)
Q Consensus 163 ~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~-~~~ggh~s~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~iD 239 (358)
.+.+. +.++++||+.|+..++.++++|||+|++++ +.|+++......+. ...+...|. ++..++.++ ++.+|
T Consensus 80 ~~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~--~~~~v~~~~-~~~~d 154 (431)
T 3ht4_A 80 AEAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNI--GYNAVPLTE-GGLVD 154 (431)
T ss_dssp CSEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTC--EEEECCBCT-TSSBC
T ss_pred CCccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCC--EEEEeCCCC-CCCcC
Confidence 98642 233467999999999999999999999987 76765432100000 001123454 556666764 47899
Q ss_pred HHHHHHHhhhcCCeEEEEcC-CCCC-----CCCCHHHHHHHHHH--cCCEEEEeccccccccccCCccCCCC-CCcEEEE
Q 018300 240 YDMLEKTAILFRPKLIIAGA-SAYP-----RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (358)
Q Consensus 240 ~d~le~~i~~~~~klIi~~~-s~~~-----~~~dl~~I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~ 310 (358)
+++|++.+++ ++|+|++.. ++|+ ...|+++|+++|++ +|+++++|++|+.+... ..+++ ++|++++
T Consensus 155 ~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~----~~~~~~g~Di~~~ 229 (431)
T 3ht4_A 155 FEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEE----QEPCHVGADLMAG 229 (431)
T ss_dssp HHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSS----CCGGGTTCSEEEE
T ss_pred HHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccC----CCccccCCeEEEc
Confidence 9999999864 789998874 3333 34578999999999 99999999998865421 13445 8999999
Q ss_pred cCcCcCcc---CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 311 TTHKSLRG---PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 311 S~hK~L~G---p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|+||+|+| |.||++++++ ++.+++..
T Consensus 230 S~sK~lgg~~~~~GG~v~~~~------~li~~l~~ 258 (431)
T 3ht4_A 230 SLIKNPGGGIVKTGGYIVGKE------QYVEACAY 258 (431)
T ss_dssp ETTSGGGTTTCSSCEEEEECH------HHHHHHHH
T ss_pred CccccCCCCCCCceEEEEecH------HHHHHHHH
Confidence 99999876 7899999986 56666655
No 14
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.84 E-value=2.5e-20 Score=182.39 Aligned_cols=207 Identities=10% Similarity=0.107 Sum_probs=149.8
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH-HHHcC-CCCCCCcceEEeCCCHHHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA-LAAFN-LDENKWGVNVQPLSGSPANF 182 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l-a~lfg-~~~~~~~v~V~~~SGt~A~~ 182 (358)
|.+..++-.+++.+++++...+.+.+ |....+.++++|+ .+ ++++| .++ .+.+.|||.|+.
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~--------~~~~~~~~~~l~~----~~~a~~~g~~~~-----~v~~~sgt~al~ 67 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHI--------YTNYGPINQRFEQ----TIMSGFFQNRGA-----VTTVANATLGLM 67 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTC--------CSSSCHHHHHHHH----HHHHHTSTTCSE-----EEEESCHHHHHH
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCC--------cccCCHHHHHHHH----HHHHHHhCCCCe-----EEEeCCHHHHHH
Confidence 44545555667888888887776532 1111234455554 57 89999 443 477889999999
Q ss_pred HHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcC--CeEEEEcC
Q 018300 183 EVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGA 259 (358)
Q Consensus 183 ~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~--~klIi~~~ 259 (358)
.++.++ ++|||+|+++++.|.++.. .+...|. +++.++++++++.+|++++++.+...+ +|+|+..
T Consensus 68 ~al~~l~~~~Gd~Vi~~~~~~~~~~~--------~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~- 136 (377)
T 3ju7_A 68 AAIQLKKRKKGKYALMPSFTFPATPL--------AAIWCGL--EPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY- 136 (377)
T ss_dssp HHHHHHSCTTCCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB-
T ss_pred HHHHHcCCCCcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE-
Confidence 999998 9999999999987765422 3345565 556666776678999999999873335 8888743
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC-C-CCcEEEEc--CcCcCccCcEEEEEEeCCCCchhH
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVE 335 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl-~-gaDiv~~S--~hK~L~Gp~GG~I~~~~~~~~~~~ 335 (358)
+.+|...|+++|.++|+ +|++|++|++|+.|....+. ++ . .+|+.++| .||+|+++.||+++++++ +
T Consensus 137 ~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~---~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~-----~ 207 (377)
T 3ju7_A 137 ATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGM---HYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNE-----E 207 (377)
T ss_dssp CGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTE---ETTTTCSSEEEEECBTTSSSCCBSCEEEEESCH-----H
T ss_pred CCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCE---eccCCCCcEEEEECCCCCcCCCCCcEEEEECCH-----H
Confidence 23678899999999999 99999999999988654332 23 1 35666555 579998888999999886 7
Q ss_pred HHHHHhhccCCcc
Q 018300 336 LESAINNAVFPGL 348 (358)
Q Consensus 336 ~~~~i~~~~f~g~ 348 (358)
+.++++.....|.
T Consensus 208 l~~~~~~~~~~g~ 220 (377)
T 3ju7_A 208 DIQRIKRMGNFGF 220 (377)
T ss_dssp HHHHHHHHTBTTB
T ss_pred HHHHHHHHHhcCC
Confidence 8888777655443
No 15
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.82 E-value=8.8e-20 Score=175.55 Aligned_cols=198 Identities=17% Similarity=0.100 Sum_probs=141.1
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
.+.+.|++..+++.|++++...+...+ +.. ..++.+.+++++++++|++.. +...+++++|++|+.
T Consensus 3 ~~~~~~gp~~~~~~v~~a~~~~~~~~~-----------~~~-~~~~~~~~~~~la~~~~~~~~-~~~v~~~~g~t~al~- 68 (384)
T 3zrp_A 3 KLLLHVGPTTIKEDVLVAGLENNVGFT-----------SKE-FVEALAYSLKGLRYVMGASKN-YQPLIIPGGGTSAME- 68 (384)
T ss_dssp ---CCSSCSCCCHHHHHHTTCCSCCTT-----------SHH-HHHHHHHHHHHHHHHHTCCTT-SEEEEEESCHHHHHH-
T ss_pred ceeccCCCCCCCHHHHHHhhccccccc-----------cHH-HHHHHHHHHHHHHHHhCCCCC-CcEEEEcCCcHHHHH-
Confidence 356778899999999999976543211 112 234445578889999999862 112355567788999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
++.++++|||+|+++++.|.++ .+. ..+...|. +++.+++++ ++.+|++++++.+++.++++|++..++
T Consensus 69 ~~~~~~~~gd~vi~~~~~~~~~---~~~---~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~np 139 (384)
T 3zrp_A 69 SVTSLLKPNDKILVVSNGVFGD---RWE---QIFKRYPV--NVKVLRPSP-GDYVKPGEVEEEVRKSEYKLVALTHVETS 139 (384)
T ss_dssp HGGGGCCTTCEEEEECSSHHHH---HHH---HHHTTSSC--EEEEECCST-TCCCCHHHHHHHHHHSCEEEEEEESEETT
T ss_pred HHHhhcCCCCEEEEecCCcchH---HHH---HHHHHcCC--cEEEecCCC-CCCCCHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 9999999999999987643221 110 11234565 445555663 568999999999887678988876544
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||+|.|+.| |+++.+++
T Consensus 140 tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~ 205 (384)
T 3zrp_A 140 TGVREPVKDVINKIRKYVELIVVDGVSSVGAE-----EVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPK 205 (384)
T ss_dssp TTEECCHHHHHHHHGGGEEEEEEECTTTTTTS-----CCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHH
T ss_pred CceECcHHHHHHHHHhcCCEEEEECcccccCc-----cccccccCCCEEEecCcccccCCCceEEEEECHH
Confidence 45688999999999999999999999986643 22233 789999999999977655 88888773
No 16
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.82 E-value=1.8e-19 Score=175.67 Aligned_cols=205 Identities=11% Similarity=0.091 Sum_probs=147.3
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHH
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~ 182 (358)
..+.+.|++..+++.|++++....... + ... ..++.+.+++++++++|++++. +.+.+.||+.|+.
T Consensus 11 ~~~~~~p~p~~~~~~v~~a~~~~~~~~----------~-~~~-~~~~~~~l~~~la~~~g~~~~~--~~~~~~s~t~al~ 76 (416)
T 3isl_A 11 LRTIMTPGPVEVDPRVLRVMSTPVVGQ----------F-DPA-FTGIMNETMEMLRELFQTKNRW--AYPIDGTSRAGIE 76 (416)
T ss_dssp CCEECSSSSCCCCHHHHHHTTSCCCCT----------T-SHH-HHHHHHHHHHHHHHHTTCCCSE--EEEEESCHHHHHH
T ss_pred cceeecCCCcCcCHHHHHHhcccCCCC----------c-cHH-HHHHHHHHHHHHHHHhCCCCCc--EEEecCcHHHHHH
Confidence 445677888889999999986521110 1 112 2344555788899999998741 1235667889999
Q ss_pred HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
.++.++++|||+|+++++.|.++. +. ..+...|. +++.+++++ ++.+|++++++.+++.++++|++..++
T Consensus 77 ~~~~~l~~~gd~Vl~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~n 147 (416)
T 3isl_A 77 AVLASVIEPEDDVLIPIYGRFGYL---LT---EIAERYGA--NVHMLECEW-GTVFDPEDIIREIKKVKPKIVAMVHGET 147 (416)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH---HH---HHHHHTTC--EEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCEEEEecCCcccHH---HH---HHHHhcCC--eeEEEecCC-CCCCCHHHHHHHHhhCCCcEEEEEccCC
Confidence 999999999999999886443311 10 12344565 444555653 568999999999875578988886544
Q ss_pred -CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHH
Q 018300 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (358)
Q Consensus 262 -~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~ 337 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +..++ ++|++++|+||+|.||.| |+++.++ ++.
T Consensus 148 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~------~~~ 216 (416)
T 3isl_A 148 STGRIHPLKAIGEACRTEDALFIVDAVATIGGC-----EVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNE------RVA 216 (416)
T ss_dssp TTTEECCCHHHHHHHHHTTCEEEEECTTTTTTS-----CCCTTTTTCSEEECCSSSTTCCCSSEEEEEECH------HHH
T ss_pred CCceecCHHHHHHHHHHcCCEEEEECCccccCC-----CcchhhcCCCEEEecCccccCCCCCeEEEEECH------HHH
Confidence 45688999999999999999999999986643 22233 789999999999888766 8888776 566
Q ss_pred HHHh
Q 018300 338 SAIN 341 (358)
Q Consensus 338 ~~i~ 341 (358)
+++.
T Consensus 217 ~~~~ 220 (416)
T 3isl_A 217 DVIA 220 (416)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 6665
No 17
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.82 E-value=1.4e-19 Score=176.13 Aligned_cols=207 Identities=16% Similarity=0.145 Sum_probs=148.6
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHH
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~ 182 (358)
..+.+.|++..+++.|++++...+...+ +..+ .++.+.+++++++++|.+..+ ..+++.||+.|+.
T Consensus 13 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~la~~~~~~~~~--~v~~~~sgt~al~ 78 (411)
T 3nnk_A 13 SRLLMGPGPINADPRVLRAMSSQLIGQY-----------DPAM-THYMNEVMALYRGVFRTENRW--TMLVDGTSRAGIE 78 (411)
T ss_dssp CCEEESSSCCCCCHHHHHHHTSCCCCTT-----------CHHH-HHHHHHHHHHHHHHHTCCCSE--EEEEESCHHHHHH
T ss_pred cceeecCCCCCCCHHHHHHhhccccccc-----------cHHH-HHHHHHHHHHHHHHhCCCCCc--EEEECCCcHHHHH
Confidence 3456778888999999999975432111 1222 234445788899999998742 1344557789999
Q ss_pred HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
.++.++++|||+|++.++.|.+.. + ...+...|.. ++.++++ +++.+|+++|++.++..++++|++..++
T Consensus 79 ~~~~~~~~~gd~Vl~~~~~~~~~~---~---~~~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 149 (411)
T 3nnk_A 79 AILVSAIRPGDKVLVPVFGRFGHL---L---CEIARRCRAE--VHTIEVP-WGEVFTPDQVEDAVKRIRPRLLLTVQGDT 149 (411)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHH---H---HHHHHHTTCE--EEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCEEEEecCCchHHH---H---HHHHHHcCCe--EEEEecC-CCCCCCHHHHHHHHhhCCCeEEEEeCCCC
Confidence 999999999999999886543311 1 0123445654 4444454 4568899999999875588988886544
Q ss_pred -CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHH
Q 018300 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (358)
Q Consensus 262 -~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~ 337 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||+|.||.| |+++.++ ++.
T Consensus 150 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~ 218 (411)
T 3nnk_A 150 STTMLQPLAELGEICRRYDALFYTDATASLGGN-----PLETDVWGLDAVSAGMQKCLGGPSGTSPITLSA------RME 218 (411)
T ss_dssp TTTEECCCTTHHHHHHHHTCEEEEECTTTBTTB-----CCCTTTTTCSEEECCSTTTTCCCSSEEEEEECH------HHH
T ss_pred CcceeccHHHHHHHHHHcCCEEEEECCcccCCc-----ccchhccCCcEEEecCccccCCCCceEEEEECH------HHH
Confidence 45678999999999999999999999986543 22233 789999999999877766 8888877 566
Q ss_pred HHHhhc
Q 018300 338 SAINNA 343 (358)
Q Consensus 338 ~~i~~~ 343 (358)
+++...
T Consensus 219 ~~~~~~ 224 (411)
T 3nnk_A 219 EAIRRR 224 (411)
T ss_dssp HHHHTT
T ss_pred HHHhhc
Confidence 666653
No 18
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.81 E-value=5.6e-19 Score=170.25 Aligned_cols=192 Identities=14% Similarity=0.091 Sum_probs=140.0
Q ss_pred cccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCCHHHHHHHHH
Q 018300 108 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYT 186 (358)
Q Consensus 108 ias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~-~~~~~v~V~~~SGt~A~~~a~~ 186 (358)
.++...+++.|++++...+.+. | +.. ..++.+.+++++++++|++ .+ ..+++.+|+.|+..++.
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~----~-------~~~-~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~a~~~~~~ 89 (386)
T 2dr1_A 25 TAGPVACFPEVLEIMKVQMFSH----R-------SKE-YRKVHMDTVERLREFLEVEKGE---VLLVPSSGTGIMEASIR 89 (386)
T ss_dssp CSSSCCCCHHHHHHTTSCCCCT----T-------SHH-HHHHHHHHHHHHHHHHTCSSSE---EEEESSCHHHHHHHHHH
T ss_pred cCCCcCCcHHHHHHHhcccccc----c-------CHH-HHHHHHHHHHHHHHHhCCCCCc---EEEEeCChHHHHHHHHH
Confidence 4677788999999987654321 1 112 2456666788899999997 32 23445677889999999
Q ss_pred HhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh-cCCeEEEEcCCC--CC
Q 018300 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASA--YP 263 (358)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~-~~~klIi~~~s~--~~ 263 (358)
++++|||+|+++++.|.++. +. ..+...|. +++.+++++ ++.+|+++|++.++. .++++|++..++ +|
T Consensus 90 ~l~~~gd~vl~~~~~~~~~~-~~-----~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG 160 (386)
T 2dr1_A 90 NGVSKGGKVLVTIIGAFGKR-YK-----EVVESNGR--KAVVLEYEP-GKAVKPEDLDDALRKNPDVEAVTITYNETSTG 160 (386)
T ss_dssp HHSCTTCEEEEEESSHHHHH-HH-----HHHHHTTC--EEEEEECCT-TCCCCHHHHHHHHHHCTTCCEEEEESEETTTT
T ss_pred HhhcCCCeEEEEcCCchhHH-HH-----HHHHHhCC--ceEEEecCC-CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcc
Confidence 99999999999887554420 10 12334565 445555653 567999999998853 468888876544 45
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeC
Q 018300 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKK 328 (358)
Q Consensus 264 ~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~ 328 (358)
...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||+|++|.| |++++++
T Consensus 161 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~ 223 (386)
T 2dr1_A 161 VLNPLPELAKVAKEHDKLVFVDAVSAMGGA-----DIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSE 223 (386)
T ss_dssp EECCHHHHHHHHHHTTCEEEEECTTTBTTB-----CCCTTTTTCSEEEEETTSTTCCCSSCEEEEECH
T ss_pred hhCCHHHHHHHHHHcCCeEEEEccccccCc-----cccccccCCcEEEEeccccccCCCceEEEEECH
Confidence 678999999999999999999999987643 12233 789999999999988855 9999987
No 19
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.81 E-value=1.7e-19 Score=175.58 Aligned_cols=203 Identities=17% Similarity=0.160 Sum_probs=145.1
Q ss_pred cccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHH
Q 018300 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (358)
Q Consensus 106 ~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~ 185 (358)
++-.+....++.+++++...+...+ | ....+...+ .++.+++++|.+. .++++|||.|+..++
T Consensus 26 ~l~~~~p~~~~~~~~a~~~~~~~~~---~-----~~~~~~~~~----l~~~la~~~~~~~-----~i~~~~gt~al~~~l 88 (391)
T 3dr4_A 26 RISVAAPRLDGNERDYVLECMDTTW---I-----SSVGRFIVE----FEKAFADYCGVKH-----AIACNNGTTALHLAL 88 (391)
T ss_dssp --CCCCCCCCSSHHHHHHHHHHHTC---C-----SSCSHHHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred eeccCCCCCCHHHHHHHHHHHHcCC---c-----cCCChHHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHHHHH
Confidence 3334555667889999887765432 1 111233333 4556888999874 477889999999999
Q ss_pred HHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC
Q 018300 186 TAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (358)
Q Consensus 186 ~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~ 264 (358)
.++ +++||+|+++++.|.++.. .+...|. +++.++++++++.+|++++++.++. ++++|+++. .+|.
T Consensus 89 ~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~n-~tG~ 156 (391)
T 3dr4_A 89 VAMGIGPGDEVIVPSLTYIASAN--------SVTYCGA--TPVLVDNDPRTFNLDAAKLEALITP-RTKAIMPVH-LYGQ 156 (391)
T ss_dssp HHHTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCGGGSGGGCCT-TEEEECCBC-GGGC
T ss_pred HHcCCCCcCEEEECCCchHHHHH--------HHHHCCC--EEEEEecCccccCcCHHHHHHhcCC-CceEEEEEC-CCCC
Confidence 999 9999999999887766422 2334565 5566667766778999999998764 678777542 4567
Q ss_pred CCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEc--CcCcCccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 265 ~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S--~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
..|+++|.++|+++|+++++|++|+.|....+..... ..|++++| .||+|+|++||+++++++ ++.+++..
T Consensus 157 ~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~S~s~~K~l~~g~gg~~~~~~~-----~~~~~~~~ 229 (391)
T 3dr4_A 157 ICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGS--LGDCATFSFFGNAIITTGEGGMITTNDD-----DLAAKMRL 229 (391)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS--SSSEEEEECBTTSSSCCBSCEEEEESCH-----HHHHHHHH
T ss_pred hhhHHHHHHHHHHcCCEEEEECcccccceECCeeecc--cCCEEEEECCCCCcCCcCCeEEEEECCH-----HHHHHHHH
Confidence 8899999999999999999999999887654321111 23666666 679998888999998875 67666655
Q ss_pred cc
Q 018300 343 AV 344 (358)
Q Consensus 343 ~~ 344 (358)
..
T Consensus 230 ~~ 231 (391)
T 3dr4_A 230 LR 231 (391)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 20
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.81 E-value=2.4e-19 Score=174.70 Aligned_cols=207 Identities=14% Similarity=0.079 Sum_probs=143.5
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al- 188 (358)
+...+++.|++++...+.+.+ +++...|..|... ....+.+++++++++|++++ ..+++++|+.++..++.++
T Consensus 34 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~al~~~~~~l~ 107 (406)
T 3cai_A 34 AGMLIPDSVATTVSTAFRRSG--ASTVGAHPSARRS-AAVLDAAREAVADLVNADPG---GVVLGADRAVLLSLLAEASS 107 (406)
T ss_dssp GCCCCCHHHHHHHHHHHHHCC--SSSCSSSHHHHHH-HHHHHHHHHHHHHHHTCCGG---GEEEESCHHHHHHHHHHHTG
T ss_pred CcCCCCHHHHHHHHHHHHhcC--CCCCCccHHHHHH-HHHHHHHHHHHHHHhCCCCC---eEEEeCChHHHHHHHHHHHh
Confidence 344789999999988776533 2333333222222 23334478889999999753 2344455677888888887
Q ss_pred --ccCCCEEEecCCCCCcccccccccchhcc-ccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CC
Q 018300 189 --LKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YP 263 (358)
Q Consensus 189 --l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~ 263 (358)
+++||+|+++++.|.++.... ..+ ...|. +++.++++++++.+|+++|++.++. ++++|++..++ +|
T Consensus 108 ~~~~~gd~vi~~~~~~~~~~~~~-----~~~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG 179 (406)
T 3cai_A 108 SRAGLGYEVIVSRLDDEANIAPW-----LRAAHRYGA--KVKWAEVDIETGELPTWQWESLISK-STRLVAVNSASGTLG 179 (406)
T ss_dssp GGGBTTCEEEEETTSCGGGTHHH-----HHHHHHHBC--EEEEECCCTTTCCCCGGGHHHHCCT-TEEEEEEESBCTTTC
T ss_pred hccCCCCEEEEcCCccHHHHHHH-----HHHHHhcCC--eEEEEecCcccCCcCHHHHHHHhCC-CceEEEEeCCcCCcc
Confidence 799999999988776643211 010 11354 4555566655678999999998864 68888876554 46
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcEE-EEEEeCCCCchhHHHHHH
Q 018300 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGG-MIFFKKDPVLGVELESAI 340 (358)
Q Consensus 264 ~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~GG-~I~~~~~~~~~~~~~~~i 340 (358)
...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||++ ||++| ++++++ ++.+++
T Consensus 180 ~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~-g~~~G~~~~~~~------~~~~~l 247 (406)
T 3cai_A 180 GVTDLRAMTKLVHDVGALVVVDHSAAAPYR-----LLDIRETDADVVTVNAHAWG-GPPIGAMVFRDP------SVMNSF 247 (406)
T ss_dssp BBCCCHHHHHHHHHTTCEEEEECTTTTTTC-----CCCHHHHCCSEEEEEGGGGT-SCSCEEEEESCH------HHHHTS
T ss_pred ccCCHHHHHHHHHHcCCEEEEEcccccCCC-----CCCchhcCCCEEEeehhhhc-CCCcCeEEEEeh------HHHhhc
Confidence 788999999999999999999999986643 11222 7899999999976 57788 888876 565555
Q ss_pred hh
Q 018300 341 NN 342 (358)
Q Consensus 341 ~~ 342 (358)
..
T Consensus 248 ~~ 249 (406)
T 3cai_A 248 GS 249 (406)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 21
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.81 E-value=3.7e-19 Score=172.54 Aligned_cols=198 Identities=22% Similarity=0.270 Sum_probs=142.6
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD 193 (358)
.++.+.+++...+.. +..++++.++..|.. +....+++++++++|.+. .+.++||++|+..++.++++|||
T Consensus 58 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~---~~~~~l~~~la~~~~~~~-----~i~~~sGt~a~~~~l~~~~~~gd 128 (399)
T 3tqx_A 58 DHPALIKTAQTVVEQ-YGFGMASVRFICGTQ---TIHKELEKDISEFLGTDD-----TILYSSCFDANGGLFETLLGPED 128 (399)
T ss_dssp TCHHHHHHHHHHHHH-HCSCCCSCCCCCCCB---HHHHHHHHHHHHHHTCSE-----EEEESCHHHHHHTTHHHHCCTTC
T ss_pred CCHHHHHHHHHHHHH-hCCCCCCcCccccCc---hHHHHHHHHHHHHHCCCc-----EEEECchHHHHHHHHHHhcCCCC
Confidence 468999999887754 445556666655543 222335667889999874 47788999999999999999999
Q ss_pred EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCCC--CCCC
Q 018300 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAY--PRDF 266 (358)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-----~~klIi~~~s~~--~~~~ 266 (358)
+|++.++.|+++.. .+...|. ++++++. +|++++++.++.. ++++|++..+++ |...
T Consensus 129 ~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~ 192 (399)
T 3tqx_A 129 AIISDELNHASIID--------GIRLCKA--QRYRYKN------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIA 192 (399)
T ss_dssp EEEEETTCCHHHHH--------HHHSCCS--EEEEECT------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEEC
T ss_pred EEEECCcccHHHHH--------HHHHcCC--ceeEeCC------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcC
Confidence 99999887765422 3345565 3444332 5778888887653 688888876544 5578
Q ss_pred CHHHHHHHHHHcCCEEEEeccccccccccCCc--cC--CC-CCCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHh
Q 018300 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVV--AD--PF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 267 dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~--~~--pl-~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
|+++|.++|+++|+++++|++|+.|+...... .. .+ .+.|++++|+||+++|++||++++++ ++.+.+.
T Consensus 193 ~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~------~~~~~~~ 266 (399)
T 3tqx_A 193 DLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGHK------EIIEWLR 266 (399)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECH------HHHHHHH
T ss_pred CHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcCH------HHHHHHH
Confidence 99999999999999999999998665422110 00 11 25699999999999889999999987 4555554
Q ss_pred h
Q 018300 342 N 342 (358)
Q Consensus 342 ~ 342 (358)
.
T Consensus 267 ~ 267 (399)
T 3tqx_A 267 N 267 (399)
T ss_dssp H
T ss_pred H
Confidence 4
No 22
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.81 E-value=3e-19 Score=173.00 Aligned_cols=206 Identities=12% Similarity=0.074 Sum_probs=146.7
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
.+.+.+++..+++.|++++...+...| . ...+.....+++++++++|+++++ ..+++++|++|+..
T Consensus 20 ~~~~~~g~~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~l~~~la~~~g~~~~~--~i~~~~g~t~a~~~ 85 (393)
T 2huf_A 20 KLLMGPGPSNAPQRVLDAMSRPILGHL-----------H-PETLKIMDDIKEGVRYLFQTNNIA--TFCLSASGHGGMEA 85 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTSCCCCTT-----------S-HHHHHHHHHHHHHHHHHHTCCCSE--EEEESSCHHHHHHH
T ss_pred eEEecCCCCCCCHHHHHHHHhhhccCC-----------C-HHHHHHHHHHHHHHHHHhCCCCCc--EEEEcCcHHHHHHH
Confidence 455667777889999999876543211 1 122334445788899999997631 12345677889999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
++.++++|||+|+++++.|.++. +. ..+...|. +++.+++++ ++.+|++++++.+++.++++|++..++
T Consensus 86 ~~~~~~~~gd~vl~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~np 156 (393)
T 2huf_A 86 TLCNLLEDGDVILIGHTGHWGDR---SA---DMATRYGA--DVRVVKSKV-GQSLSLDEIRDALLIHKPSVLFLTQGDSS 156 (393)
T ss_dssp HHHHHCCTTCEEEEEESSHHHHH---HH---HHHHHTTC--EEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHHHhCCCCEEEEECCCcchHH---HH---HHHHHcCC--eeEEEeCCC-CCCCCHHHHHHHHhccCCcEEEEEccCCC
Confidence 99999999999999887554421 10 11223465 344555553 468999999998865478988876544
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHHH
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~~ 338 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||+|.||.| |++++++ ++.+
T Consensus 157 tG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~------~~~~ 225 (393)
T 2huf_A 157 TGVLQGLEGVGALCHQHNCLLIVDTVASLGGA-----PMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSH------RAVE 225 (393)
T ss_dssp TTEECCCTTHHHHHHHTTCEEEEECTTTBTTB-----CCCTTTTTCSEEECCSSSTTCCCSSCEEEEECH------HHHH
T ss_pred ccccCCHHHHHHHHHHcCCEEEEEcccccCCC-----CcchhhcCccEEEECCCcccccCCCeEEEEECH------HHHH
Confidence 45678899999999999999999999986643 22233 689999999999988777 8888876 6667
Q ss_pred HHhhc
Q 018300 339 AINNA 343 (358)
Q Consensus 339 ~i~~~ 343 (358)
++...
T Consensus 226 ~~~~~ 230 (393)
T 2huf_A 226 RYKRR 230 (393)
T ss_dssp HHHTC
T ss_pred HHhhc
Confidence 76653
No 23
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.80 E-value=1.8e-19 Score=174.29 Aligned_cols=196 Identities=15% Similarity=0.104 Sum_probs=144.0
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-cc
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK 190 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~ 190 (358)
...++.+++++...+...+ | ...+...+ +++.+++++|.+. .+++.|||.|+..++.++ ++
T Consensus 13 ~~~~~~~~~a~~~~~~~~~--------~-~~~~~~~~----l~~~la~~~~~~~-----~i~~~sgt~al~~~l~~l~~~ 74 (373)
T 3frk_A 13 DEIEYEIKFKFEEIYKRNW--------F-ILGDEDKK----FEQEFADYCNVNY-----CIGCGNGLDALHLILKGYDIG 74 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTC--------C-SSSHHHHH----HHHHHHHHHTSSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHCCC--------c-cCCchHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCC
Confidence 3456788888877765432 1 12233333 4556888999874 467889999999999999 99
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHH
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR 270 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~ 270 (358)
|||+|+++++.|.++.. .+...|. +++.++++++++.+|++++++.+++ ++++|+.+. .+|...|+++
T Consensus 75 ~gd~Vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~n-~~G~~~~l~~ 142 (373)
T 3frk_A 75 FGDEVIVPSNTFIATAL--------AVSYTGA--KPIFVEPDIRTYNIDPSLIESAITE-KTKAIIAVH-LYGQPADMDE 142 (373)
T ss_dssp TTCEEEEETTSCTHHHH--------HHHHHSC--EEEEECEETTTTEECGGGTGGGCCT-TEEEEEEEC-CTTCCCCHHH
T ss_pred CcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEeccccccCcCHHHHHHhcCC-CCeEEEEEC-CCcCcccHHH
Confidence 99999999987766422 2334565 5566667766788999999998865 788887543 4677899999
Q ss_pred HHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEc--CcCcCcc-CcEEEEEEeCCCCchhHHHHHHhhccC
Q 018300 271 MRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT--THKSLRG-PRGGMIFFKKDPVLGVELESAINNAVF 345 (358)
Q Consensus 271 I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S--~hK~L~G-p~GG~I~~~~~~~~~~~~~~~i~~~~f 345 (358)
|.++|+++|+++++|++|+.|....+. ++. .+|++++| .||+|++ +.||+++++++ ++.+++.....
T Consensus 143 i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~-----~~~~~~~~~~~ 213 (373)
T 3frk_A 143 IKRIAKKYNLKLIEDAAQAHGSLYKGM---KVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDK-----DLAEKIKALSN 213 (373)
T ss_dssp HHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSSCEEEEESCH-----HHHHHHHHHHB
T ss_pred HHHHHHHcCCEEEEECCcccCCEECCE---eccccccEEEEeCcCCCccCccceeEEEEeCCH-----HHHHHHHHHHh
Confidence 999999999999999999987654332 222 47999888 5599987 67899999875 66666665433
No 24
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.80 E-value=5.6e-19 Score=171.47 Aligned_cols=188 Identities=14% Similarity=0.142 Sum_probs=136.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~pG 192 (358)
.++.+++++...+.... .+ |+.+ +...+ .++.+++++|.+. .|.++|||+|+..++.++ ++||
T Consensus 15 ~~~~~~~a~~~~l~~~~-~~-----~~~~-~~~~~----l~~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~g 78 (388)
T 1b9h_A 15 YDDAERNGLVRALEQGQ-WW-----RMGG-DEVNS----FEREFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPG 78 (388)
T ss_dssp CCHHHHHHHHHHHHTSC-CB-----TTTC-SHHHH----HHHHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHHHHcCC-ee-----ecCC-HHHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCc
Confidence 45889999988775421 01 2222 22333 4556889999874 477889999999999999 8999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHH
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~ 272 (358)
|+|+++++.|.++.. .+...|. +++.++++++++.+|+++|++.++. ++++|+.+ +.+|...|+++|.
T Consensus 79 d~Vi~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~-n~tG~~~~l~~i~ 146 (388)
T 1b9h_A 79 TEVIVPAFTFISSSQ--------AAQRLGA--VTVPVDVDAATYNLDPEAVAAAVTP-RTKVIMPV-HMAGLMADMDALA 146 (388)
T ss_dssp CEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB-CGGGCCCCHHHHH
T ss_pred CEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe-CCccCcCCHHHHH
Confidence 999999887766432 2344565 4566667765678999999998864 67877722 2357788999999
Q ss_pred HHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 273 QIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 273 ~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
++|+++|++|++|++|+.|....+.....+..+++.++|.||+++|++||+++++++
T Consensus 147 ~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~ 203 (388)
T 1b9h_A 147 KISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG 203 (388)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred HHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH
Confidence 999999999999999998766433211112125556666779998999999999875
No 25
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.80 E-value=3.4e-19 Score=170.77 Aligned_cols=199 Identities=15% Similarity=0.179 Sum_probs=142.1
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
++..++++.|++++...+.+.+ ++|...|..+.. ..++.+.+++++++++|++++ ..+++++|++|+..++.++
T Consensus 7 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~---~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 7 TSAKPVDERILEAMLPYMTESF--GNPSSVHSYGFK-AREAVQEAREKVAKLVNGGGG---TVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TTCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHH-HHHHHHHHHHHHHHHTTCTTE---EEEEESSHHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHhhc--CCCcccchHHHH-HHHHHHHHHHHHHHHcCCCcC---eEEEECCchHHHHHHHHHh
Confidence 4566789999999998876643 455443322222 234455578889999999864 1244556667999999998
Q ss_pred c----cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--C
Q 018300 189 L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--Y 262 (358)
Q Consensus 189 l----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~ 262 (358)
. +|||+|+++++.|.++.... ..+...|. ++..++++ +++.+|+++|++.+++ ++++|++..++ +
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~npt 151 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINPA-----KFLQKQGF--EVEYIPVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEI 151 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHH-----HHHHHTTC--EEEEECBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTT
T ss_pred hhhhcCCCCEEEECCCCcHHHHHHH-----HHHHhcCC--EEEEeccC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCc
Confidence 7 99999999988766543211 11222455 44555566 4578999999998864 67888886655 4
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|...|+++|.++|+++|+ +++|++|+.|.. +.++. ++|++++|+||++ ||.| |+++.+++
T Consensus 152 G~~~~~~~i~~l~~~~~~-li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~g~g~~~~~~~ 214 (382)
T 4hvk_A 152 GTIQPVEEISEVLAGKAA-LHIDATASVGQI-----EVDVEKIGADMLTISSNDIY-GPKGVGALWIRKE 214 (382)
T ss_dssp CBBCCHHHHHHHHSSSSE-EEEECTTTBTTB-----CCCHHHHTCSEEEEESGGGT-SCTTCEEEEEETT
T ss_pred eeeCCHHHHHHHHHHcCE-EEEEhHHhcCCC-----CCCchhcCCCEEEEeHHHhc-CCCceEEEEEcCc
Confidence 568899999999999999 999999987643 22233 7899999999964 6654 88887765
No 26
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.80 E-value=1.6e-19 Score=174.64 Aligned_cols=201 Identities=21% Similarity=0.194 Sum_probs=146.4
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
.+....++.+++++...+...+ |+ ..+...++ ++.+++++|.+. .++++|||.|+..++.++
T Consensus 9 ~~~~~~~~~v~~a~~~~~~~~~--------~~-~~~~~~~l----~~~la~~~~~~~-----~~~~~sGt~al~~al~~~ 70 (367)
T 3nyt_A 9 NQQARIKDKIDAGIQRVLRHGQ--------YI-LGPEVTEL----EDRLADFVGAKY-----CISCANGTDALQIVQMAL 70 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC--------CS-SCHHHHHH----HHHHHHHHTCSE-----EEEESCHHHHHHHHHHHT
T ss_pred ccccccCHHHHHHHHHHHhcCC--------cc-CChHHHHH----HHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHh
Confidence 3444567888888887765431 22 22333444 456888999874 477889999999999999
Q ss_pred -ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCC
Q 018300 189 -LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFD 267 (358)
Q Consensus 189 -l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~d 267 (358)
++|||+|+++++.|.++.. .+...|. +++.++++++++.+|++++++.+++ ++++|+.+ +.+|...|
T Consensus 71 ~~~~gd~Vi~~~~~~~~~~~--------~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~-~~~G~~~~ 138 (367)
T 3nyt_A 71 GVGPGDEVITPGFTYVATAE--------TVALLGA--KPVYVDIDPRTYNLDPQLLEAAITP-RTKAIIPV-SLYGQCAD 138 (367)
T ss_dssp TCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCGGGTGGGCCT-TEEEECCB-CGGGCCCC
T ss_pred CCCCcCEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCccCCcCHHHHHHhcCc-CCcEEEee-CCccChhh
Confidence 9999999999886655421 2344565 5566677776789999999998864 77887743 24577889
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcC--cCcCcc-CcEEEEEEeCCCCchhHHHHHHhhcc
Q 018300 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRG-PRGGMIFFKKDPVLGVELESAINNAV 344 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~--hK~L~G-p~GG~I~~~~~~~~~~~~~~~i~~~~ 344 (358)
+++|.++|+++|++|++|++|+.|....+..... ..|++++|+ ||++++ +.||+++++++ ++.+++....
T Consensus 139 ~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~Sf~~~K~l~~~g~gg~~~~~~~-----~l~~~~~~~~ 211 (367)
T 3nyt_A 139 FDAINAIASKYGIPVIEDAAQSFGASYKGKRSCN--LSTVACTSFFPSAPLGCYGDGGAIFTNDD-----ELATAIRQIA 211 (367)
T ss_dssp HHHHHHHHHHTTCCBEEECTTTTTCEETTEETTS--SSSEEEEECCTTSSSCCSSCCEEEEESCH-----HHHHHHHHHT
T ss_pred HHHHHHHHHHcCCEEEEECccccCCeECCeeccC--CCCEEEEECCCCCcCCCcCceeEEEeCCH-----HHHHHHHHHH
Confidence 9999999999999999999999887644321111 239999995 899977 46899999775 7777776644
Q ss_pred CC
Q 018300 345 FP 346 (358)
Q Consensus 345 f~ 346 (358)
..
T Consensus 212 ~~ 213 (367)
T 3nyt_A 212 RH 213 (367)
T ss_dssp BT
T ss_pred hc
Confidence 33
No 27
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.80 E-value=8.4e-19 Score=172.45 Aligned_cols=202 Identities=17% Similarity=0.119 Sum_probs=142.3
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al- 188 (358)
....+++.+++++...+.+.....|+. ..|.. ++.+.+++++++++|++. .++++|||+|+..++.++
T Consensus 10 ~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~g~~---~l~~~l~~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~ 78 (418)
T 2c81_A 10 EWPQHSDRTRRKIEEVFQSNRWAISGY---WTGEE---SMERKFAKAFADFNGVPY-----CVPTTSGSTALMLALEALG 78 (418)
T ss_dssp CSSCCCHHHHHHHHHHHHHTCCSTTSB---CCSSC---CHHHHHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHhcCCccccCc---ccCCH---HHHHHHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcC
Confidence 344568999999988776532111321 12321 122335567889999874 477889999999999999
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCH
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDY 268 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl 268 (358)
++|||+|+++++.|.++.. .+...|. +++.++++++++.+|++++++.++. ++++|++.. .+|...|+
T Consensus 79 ~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~ 146 (418)
T 2c81_A 79 IGEGDEVIVPSLTWIATAT--------AVLNVNA--LPVFVDVEADTYCIDPQLIKSAITD-KTKAIIPVH-LFGSMANM 146 (418)
T ss_dssp CCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHGGGCCT-TEEEECCBC-CTTCCCCH
T ss_pred CCCcCEEEECCCccHhHHH--------HHHHcCC--EEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEEeC-CcCCcccH
Confidence 8999999999887665422 2344565 4556667655678999999998864 688887654 46778899
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcC--cCcCccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTT--HKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 269 ~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~--hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
++|.++|+++|++|++|++|+.|....+. ++. ..|+.++|+ ||++++++||+++++++ ++.+++..
T Consensus 147 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~-----~l~~~~~~ 215 (418)
T 2c81_A 147 DEINEIAQEHNLFVIEDCAQSHGSVWNNQ---RAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNP-----RLFELIQQ 215 (418)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEECcccccCccCCE---ecccccceEEEeccCCcccCCCCeEEEEECCH-----HHHHHHHH
Confidence 99999999999999999999977533221 122 235555555 99986668899998654 56666554
No 28
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.80 E-value=1.7e-18 Score=169.32 Aligned_cols=197 Identities=15% Similarity=0.155 Sum_probs=141.8
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~p 191 (358)
.+++.+++++...+.+.|. . ..| +...+ .++.+++++|.+. .+++++|++|+..++.++ ++|
T Consensus 9 ~~~~~v~~a~~~~~~~~~~----~---~~g-~~~~~----l~~~la~~~~~~~-----v~~~~ggt~al~~~~~~l~~~~ 71 (394)
T 1o69_A 9 HMGGNELKYIEEVFKSNYI----A---PLG-EFVNR----FEQSVKDYSKSEN-----ALALNSATAALHLALRVAGVKQ 71 (394)
T ss_dssp ---CCHHHHHHHHHHHTTT----S---CTT-HHHHH----HHHHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHcCCc----c---CCC-hHHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 4567888888877755331 1 012 22333 4556888999843 366778889999999999 999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCCCCCCHH
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPRDFDYP 269 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~s~~~~~~dl~ 269 (358)
||+|+++++.|.++.. .+...|. +++.++++ +++.+|++++++.+++. ++++|++.. .+|...|++
T Consensus 72 gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~~l~ 139 (394)
T 1o69_A 72 DDIVLASSFTFIASVA--------PICYLKA--KPVFIDCD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAAKMD 139 (394)
T ss_dssp TCEEEEESSSCGGGTH--------HHHHTTC--EEEEECBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCCCHH
T ss_pred CCEEEECCCccHHHHH--------HHHHcCC--EEEEEEeC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChhhHH
Confidence 9999999987766432 2334565 44555566 46789999999988753 688887764 567788999
Q ss_pred HHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 270 ~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
+|.++|+++|+++++|++|+.|+...+.....+..+|+.++|.||.++|+++|+++++++ ++.+++...
T Consensus 140 ~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~-----~l~~~l~~~ 208 (394)
T 1o69_A 140 EIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNK-----EKIEKARFY 208 (394)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCH-----HHHHHHHHH
Confidence 999999999999999999998876544321223367888899999998888999999754 666666553
No 29
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.80 E-value=6.3e-19 Score=170.07 Aligned_cols=206 Identities=14% Similarity=0.084 Sum_probs=146.3
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHH
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~ 182 (358)
..+.+.|++..+++.|++++...+...+ ... ..++....++++++++|.+..+ ..+++.+|+.|+.
T Consensus 23 ~~~~~~p~p~~~~~~v~~a~~~~~~~~~-----------~~~-~~~~~~~l~~~la~~~~~~~~~--~v~~~~gg~~al~ 88 (393)
T 3kgw_A 23 TRLLLGPGPSNLAPRVLAAGSLRMIGHM-----------QKE-MLQIMEEIKQGIQYVFQTRNPL--TLVVSGSGHCAME 88 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTCCCCCTT-----------SHH-HHHHHHHHHHHHHHHHTCCCSE--EEEESCCTTTHHH
T ss_pred cceeccCCCCCCCHHHHHHhcccccCcc-----------cHH-HHHHHHHHHHHHHHHhCCCCCc--EEEEeCCcHHHHH
Confidence 4456778888999999999975332111 111 2234445688899999997642 1245567889999
Q ss_pred HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
.++.++++|||+|++..+ +|+++.+ ...+...|.. ++.+++++ ++.+|+++|++.+++.++++|++..++
T Consensus 89 ~~~~~~~~~gd~vl~~~~---~~~~~~~---~~~~~~~g~~--~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~n 159 (393)
T 3kgw_A 89 TALFNLLEPGDSFLTGTN---GIWGMRA---AEIADRIGAR--VHQMIKKP-GEHYTLQEVEEGLAQHKPVLLFLVHGES 159 (393)
T ss_dssp HHHHHHCCTTCEEEEEES---SHHHHHH---HHHHHHTTCE--EEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHhcCCCCCEEEEEeC---CchhHHH---HHHHHHcCCc--eEEEeCCC-CCCCCHHHHHHHHhhCCCcEEEEeccCC
Confidence 999999999999999864 3321111 0123345654 44445553 458999999999876578988876554
Q ss_pred -CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHH
Q 018300 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (358)
Q Consensus 262 -~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~ 337 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +..++ ++|++++|+||+|.|+.| |++++++ ++.
T Consensus 160 ptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~-----~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~------~~~ 228 (393)
T 3kgw_A 160 STGVVQPLDGFGELCHRYQCLLLVDSVASLGGV-----PIYMDQQGIDIMYSSSQKVLNAPPGISLISFND------KAK 228 (393)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTTTTS-----CCCTTTTTCCEEEEESSSTTCCCSSCEEEEECH------HHH
T ss_pred cchhhccHHHHHHHHHHcCCEEEEECCccccCc-----ccchhhcCCCEEEecCcccccCCCceeEEEECH------HHH
Confidence 45678999999999999999999999986633 12223 689999999999987766 8888877 566
Q ss_pred HHHhh
Q 018300 338 SAINN 342 (358)
Q Consensus 338 ~~i~~ 342 (358)
+++..
T Consensus 229 ~~~~~ 233 (393)
T 3kgw_A 229 YKVYS 233 (393)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 66654
No 30
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.80 E-value=7.2e-19 Score=169.36 Aligned_cols=206 Identities=13% Similarity=0.071 Sum_probs=143.8
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHH
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~ 182 (358)
...++.|++..+++.|++++...+...+ +..+ .++.+.+++++++++|++.. ..+.+.++||++|+.
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~la~~~g~~~~-~~~i~~~~ggt~al~ 85 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQVPYFR-----------TTEF-SSTMLENEKFMLEYAKAPEG-SKAVFMTCSSTGSME 85 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSCCCCCS-----------SHHH-HHHHHHHHHHHHHHHTCCTT-CEEEEESSCHHHHHH
T ss_pred CceeecCCCCCCcHHHHHHhcCCCCCCC-----------CHHH-HHHHHHHHHHHHHHhCCCCC-ceEEEEcCChhHHHH
Confidence 5678889999999999999976442211 1122 23444578889999999752 112223456689999
Q ss_pred HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
.++.++++|||+|+++++.+.++ .+. ......|..+. .++.+ .++.+|++++++.+. .++++|++..++
T Consensus 86 ~~~~~~~~~gd~vi~~~~~~~~~---~~~---~~~~~~g~~~~--~v~~~-~~~~~d~~~l~~~~~-~~~~~v~~~~~~n 155 (376)
T 3f0h_A 86 AVVMNCFTKKDKVLVIDGGSFGH---RFV---QLCEIHEIPYV--ALKLE-HGKKLTKEKLYEYDN-QNFTGLLVNVDET 155 (376)
T ss_dssp HHHHHHCCTTCCEEEEESSHHHH---HHH---HHHHHTTCCEE--EEECC-TTCCCCHHHHHTTTT-SCCCEEEEESEET
T ss_pred HHHHhccCCCCeEEEEeCChhhH---HHH---HHHHHcCCceE--EEeCC-CCCCCCHHHHHHhhc-cCceEEEEecccC
Confidence 99999999999999986532222 110 11233455444 34444 356899999998764 478888876433
Q ss_pred -CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHH
Q 018300 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (358)
Q Consensus 262 -~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~ 337 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +..++ ++|++++|+||+|+|+.| |+++.++ ++.
T Consensus 156 ptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~------~~~ 224 (376)
T 3f0h_A 156 STAVLYDTMMIGEFCKKNNMFFVCDCVSAFLAD-----PFNMNECGADVMITGSQKVLACPPGISVIVLAP------RGV 224 (376)
T ss_dssp TTTEECCHHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHTCSEEEEETTTTTCCCSSCEEEEECH------HHH
T ss_pred CcceecCHHHHHHHHHHcCCEEEEEcCccccCc-----cccccccCccEEEecCcccccCCCceEEEEECH------HHH
Confidence 56788999999999999999999999886532 22233 689999999999986666 7877776 566
Q ss_pred HHHhh
Q 018300 338 SAINN 342 (358)
Q Consensus 338 ~~i~~ 342 (358)
+++..
T Consensus 225 ~~~~~ 229 (376)
T 3f0h_A 225 ERVEK 229 (376)
T ss_dssp HHHHT
T ss_pred HHhhc
Confidence 66654
No 31
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.79 E-value=7.7e-19 Score=170.37 Aligned_cols=203 Identities=12% Similarity=0.058 Sum_probs=145.0
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a 184 (358)
+...++...+++.|++++...+.+. | +.. ..++.+.+++++++++|++++ . ..+++.+|++|+..+
T Consensus 36 ~l~~~~~~~~~~~v~~a~~~~~~~~----~-------~~~-~~~~~~~~~~~la~~~g~~~~-~-~v~~t~g~t~al~~~ 101 (393)
T 1vjo_A 36 LLLGPGPSNAHPSVLQAMNVSPVGH----L-------DPA-FLALMDEIQSLLRYVWQTENP-L-TIAVSGTGTAAMEAT 101 (393)
T ss_dssp EECSSSCCCCCHHHHHHHSSCCCCT----T-------SHH-HHHHHHHHHHHHHHHHTCCCS-C-EEEESSCHHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHhcccccc----c-------CHH-HHHHHHHHHHHHHHHhCCCCC-c-EEEEeCchHHHHHHH
Confidence 3445677788999999997655331 1 112 234555678889999999753 1 124445677899999
Q ss_pred HHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--C
Q 018300 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--Y 262 (358)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~ 262 (358)
+.++++|||+|+++++.|.+. ++. ..+...|. +++.+++++ ++.+|+++|++.+++.++++|++..++ +
T Consensus 102 ~~~~~~~gd~Vl~~~~~~~~~-~~~-----~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 172 (393)
T 1vjo_A 102 IANAVEPGDVVLIGVAGYFGN-RLV-----DMAGRYGA--DVRTISKPW-GEVFSLEELRTALETHRPAILALVHAETST 172 (393)
T ss_dssp HHHHCCTTCEEEEEESSHHHH-HHH-----HHHHHTTC--EEEEEECCT-TCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred HHhccCCCCEEEEEcCChhHH-HHH-----HHHHHcCC--ceEEEecCC-CCCCCHHHHHHHHhhCCceEEEEeccCCCc
Confidence 999999999999988755441 011 12334565 444555653 567999999998865378888876554 4
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHHHH
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~~~ 339 (358)
|...|+++|.++|+++|+++++|++|+.|.. +..++ ++|++++|+||+|.+|.+ |++++++ ++.++
T Consensus 173 G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~-----~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~------~~~~~ 241 (393)
T 1vjo_A 173 GARQPLEGVGELCREFGTLLLVDTVTSLGGV-----PIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSS------RAIEK 241 (393)
T ss_dssp TEECCCTTHHHHHHHHTCEEEEECTTTTTTS-----CCCTTTTTCSEEECCSSSTTCSCSSCEEEEECH------HHHHH
T ss_pred ceeccHHHHHHHHHHcCCEEEEECCccccCc-----CCcccccCccEEEEcCcccccCCCceEEEEECH------HHHHH
Confidence 5678999999999999999999999986532 22333 689999999999987765 8999887 56666
Q ss_pred Hh
Q 018300 340 IN 341 (358)
Q Consensus 340 i~ 341 (358)
+.
T Consensus 242 ~~ 243 (393)
T 1vjo_A 242 LQ 243 (393)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 32
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.79 E-value=7.4e-19 Score=169.18 Aligned_cols=199 Identities=15% Similarity=0.169 Sum_probs=140.8
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
++...+++.|++++...+.+.+ ++++..|..+.... +....+++++++++|++++ ..+++.+|++|+..++.++
T Consensus 7 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 7 TSAKPVDERILEAMLPYMTESF--GNPSSVHSYGFKAR-EAVQEAREKVAKLVNGGGG---TVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TTCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHH-HHHHHHHHHHHHHHTCTTE---EEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhcc--CCCCCCcHHHHHHH-HHHHHHHHHHHHHhCCCCC---eEEEcCchHHHHHHHHHHH
Confidence 3445789999999998876532 44443333232222 3344478889999999753 2345567788999999998
Q ss_pred c----cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--
Q 018300 189 L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (358)
Q Consensus 189 l----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~-- 262 (358)
. +|||+|+++++.|.++... ...+...|. +++.+++++ ++.+|+++|++.++. ++++|++..+++
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~~-----~~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~~npt 151 (382)
T 4eb5_A 81 AMRNARKGKHILVSAVEHMSVINP-----AKFLQKQGF--EVEYIPVGK-YGEVDVSFIDQKLRD-DTILVSVQHANNEI 151 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHH-----HHHHTTTTC--EEEEECBCT-TSCBCHHHHHHHCCT-TEEEEECCSBCTTT
T ss_pred HhhccCCCCEEEECCCcchHHHHH-----HHHHHhCCc--EEEEeccCC-CCccCHHHHHHHhcC-CCeEEEEeccCCCc
Confidence 7 8999999998866554221 011122455 455555663 578999999998864 688888766554
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|...|+++|.++|+++|++ ++|++|+.|.. +.++. ++|++++|+||+ .||.| |+++++++
T Consensus 152 G~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~-----~~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~ 214 (382)
T 4eb5_A 152 GTIQPVEEISEVLAGKAAL-HIDATASVGQI-----EVDVEKIGADMLTISSNDI-YGPKGVGALWIRKE 214 (382)
T ss_dssp CBBCCHHHHHHHHTTSSEE-EEECTTTBTTB-----CCCHHHHTCSEEEEETGGG-TCCSSCEEEEEETT
T ss_pred cccCCHHHHHHHHHHCCCE-EEEcchhcCCc-----ccCccccCCCEEEeehHHh-cCCCceEEEEEccc
Confidence 5688999999999999999 99999986532 22232 689999999997 56765 88888775
No 33
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.79 E-value=1e-18 Score=169.23 Aligned_cols=199 Identities=14% Similarity=0.074 Sum_probs=141.1
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
++...+++.|++++...+.+. + +.... .....+++++++++|++++ ..+++++|++|+..++.++
T Consensus 15 ~~~~~~~~~v~~a~~~~~~~~--------~---~~~~~-~~~~~l~~~la~~~g~~~~---~v~~t~g~t~a~~~~~~~~ 79 (392)
T 2z9v_A 15 AGPVNAYPEVLRGLGRTVLYD--------Y---DPAFQ-LLYEKVVDKAQKAMRLSNK---PVILHGEPVLGLEAAAASL 79 (392)
T ss_dssp SSCCCCCHHHHHHTTSCCCCT--------T---SHHHH-HHHHHHHHHHHHHTTCSSC---CEEESSCTHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHhcccccc--------c---cHHHH-HHHHHHHHHHHHHhCCCCC---EEEEeCCchHHHHHHHHHh
Confidence 556678999999987655321 1 11222 2333467889999999753 2345567788999999999
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh-cCCeEEEEcCCCC--CCC
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASAY--PRD 265 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~-~~~klIi~~~s~~--~~~ 265 (358)
++|||+|+++++.|.++. +. ..+...|.. ++.+++++ ++.+|++++++.++. .++++|++..+++ |..
T Consensus 80 ~~~gd~Vl~~~~~~~~~~---~~---~~~~~~g~~--~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~ 150 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKG---FG---YWAKRYSPH--LLEIEVPY-NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTI 150 (392)
T ss_dssp CCTTCCEEEEESSHHHHH---HH---HHHHHHCSC--EEEEECCT-TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEE
T ss_pred cCCCCEEEEecCCcccHH---HH---HHHHHcCCc--eEEeeCCC-CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCcee
Confidence 999999999887544331 10 111224553 44445553 467999999998853 3688888866554 667
Q ss_pred CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHHHHHhh
Q 018300 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 266 ~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~~~i~~ 342 (358)
.|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||++.||.| |++++++ ++.+++..
T Consensus 151 ~~l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~------~~~~~l~~ 219 (392)
T 2z9v_A 151 NPIDAIGALVSAHGAYLIVDAVSSFGGM-----KTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSE------RAWAKMKA 219 (392)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTTBTTB-----SCCGGGGTCSEEEECSSSTTCCCSCCEEEEECH------HHHHHHHT
T ss_pred ccHHHHHHHHHHcCCeEEEEcccccCCc-----ccccccccceEEEecCcccccCCCceeEEEECH------HHHHHhhh
Confidence 8999999999999999999999986533 22233 689999999999988777 8998876 56666643
No 34
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.79 E-value=4.8e-18 Score=163.62 Aligned_cols=200 Identities=18% Similarity=0.077 Sum_probs=141.4
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
.....+++.|.+++...+...+ +++. ......++++.+++++++++|++.++ .+++++|++|+..++.++
T Consensus 37 ~~~~~~~~~v~~a~~~~~~~~~--~~~~-----~~~~~~~~~~~l~~~la~~~~~~~~~---i~~~~ggt~a~~~~~~~~ 106 (397)
T 3f9t_A 37 SMCSNVLPITRKIVDIFLETNL--GDPG-----LFKGTKLLEEKAVALLGSLLNNKDAY---GHIVSGGTEANLMALRCI 106 (397)
T ss_dssp CSCCCCCTHHHHHHHHHTTCCT--TSGG-----GBHHHHHHHHHHHHHHHHHTTCTTCE---EEEESCHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHHhhcC--CCcc-----cChhHHHHHHHHHHHHHHHhCCCCCC---EEEecCcHHHHHHHHHHH
Confidence 4455678899999988765433 2221 11234567777889999999998742 355667888999999998
Q ss_pred ccC-------------CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEE
Q 018300 189 LKP-------------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (358)
Q Consensus 189 l~p-------------GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klI 255 (358)
.++ ||+|++.++.|.++.. .+...|. +++.+++++ ++.+|+++|++.+++.++++|
T Consensus 107 ~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~v 175 (397)
T 3f9t_A 107 KNIWREKRRKGLSKNEHPKIIVPITAHFSFEK--------GREMMDL--EYIYAPIKE-DYTIDEKFVKDAVEDYDVDGI 175 (397)
T ss_dssp HHHHHHHHHTTCCCCSSCEEEEETTCCTHHHH--------HHHHHTC--EEEEECBCT-TSSBCHHHHHHHHHHSCCCEE
T ss_pred HHHHHhhhhhcccCCCCeEEEECCcchhHHHH--------HHHHcCc--eeEEEeeCC-CCcCCHHHHHHHHhhcCCeEE
Confidence 766 9999999887665321 2334565 445555663 578999999999876467777
Q ss_pred EEcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCc-------cCCCC---CCcEEEEcCcCcCccC-cEE
Q 018300 256 IAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-------ADPFK---YCDVVTTTTHKSLRGP-RGG 322 (358)
Q Consensus 256 i~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-------~~pl~---gaDiv~~S~hK~L~Gp-~GG 322 (358)
++..++ +|...|+++|.++|+++|+++++|++|+.+....... ..+++ ++|++++|+||++.+| +.|
T Consensus 176 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g 255 (397)
T 3f9t_A 176 IGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSG 255 (397)
T ss_dssp EEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCE
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCce
Confidence 765544 4567899999999999999999999998554321100 01222 6899999999998555 568
Q ss_pred EEEEeCC
Q 018300 323 MIFFKKD 329 (358)
Q Consensus 323 ~I~~~~~ 329 (358)
+++++++
T Consensus 256 ~~~~~~~ 262 (397)
T 3f9t_A 256 GILFKDI 262 (397)
T ss_dssp EEEESSG
T ss_pred EEEEeCH
Confidence 8777765
No 35
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.79 E-value=4.3e-18 Score=164.81 Aligned_cols=207 Identities=15% Similarity=0.148 Sum_probs=143.7
Q ss_pred hcccccccCC---CCcHHHHHHHhhhhhcccCCCCCCCcCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH
Q 018300 103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (358)
Q Consensus 103 ~~i~lias~n---~~s~~V~~al~~~l~~~~~~G~pg~r~~~G-~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt 178 (358)
.-+++..+++ .+++.+++++...+.+ +..+++..+|..| .+.. ..+++.+++++|++. .++++||+
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~----~~l~~~la~~~g~~~-----~i~~~sGt 109 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVH----QALEEELAEWLGYSR-----ALLFISGF 109 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHH----HHHHHHHHHHHTCSE-----EEEESCHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHH----HHHHHHHHHHhCCCc-----EEEeCCcH
Confidence 3455555454 4789999999887754 2234444444333 2322 235667888999863 47789999
Q ss_pred HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEE
Q 018300 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLII 256 (358)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi 256 (358)
+|+..++.++++|||+|++.++.|+++.. .+...|.. ++.++ .+|++++++.+++. ++++|+
T Consensus 110 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~--~~~~~------~~d~~~l~~~l~~~~~~~~~v~ 173 (384)
T 1bs0_A 110 AANQAVIAAMMAKEDRIAADRLSHASLLE--------AASLSPSQ--LRRFA------HNDVTHLARLLASPCPGQQMVV 173 (384)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHTSSSE--EEEEC------TTCHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEcccccHHHHH--------HHHHcCCC--EEEeC------CCCHHHHHHHHHhcCCCCeEEE
Confidence 99999999999999999998876654321 23445653 34433 25899999988654 267777
Q ss_pred EcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccc-cCC-ccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCCCC
Q 018300 257 AGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (358)
Q Consensus 257 ~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~-~g~-~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~~ 331 (358)
+..++ +|...|+++|.++|+++|+++++|++|+.|... .+. .+..++ +.|++++|+||+++ |.||++++++
T Consensus 174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~--- 249 (384)
T 1bs0_A 174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG-VSGAAVLCSS--- 249 (384)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS-SCCEEEEECH---
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh-ccCcEEEeCH---
Confidence 76554 456889999999999999999999999877532 111 112233 58999999999885 7889999976
Q ss_pred chhHHHHHHhh
Q 018300 332 LGVELESAINN 342 (358)
Q Consensus 332 ~~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 250 ---~~~~~l~~ 257 (384)
T 1bs0_A 250 ---TVADYLLQ 257 (384)
T ss_dssp ---HHHHHHHH
T ss_pred ---HHHHHHHH
Confidence 55555544
No 36
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.78 E-value=1.3e-18 Score=168.76 Aligned_cols=202 Identities=13% Similarity=0.051 Sum_probs=142.2
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceE-EeCCCHHHHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNV-QPLSGSPANFE 183 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V-~~~SGt~A~~~ 183 (358)
+.+.+++..+++.|++++.+.+...| ....+.....+++++++++|.+++ .+| ++.+|++|+..
T Consensus 20 ~~~~~~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~---~~v~~~~g~t~al~~ 84 (396)
T 2ch1_A 20 IMMGPGPSNCSKRVLTAMTNTVLSNF------------HAELFRTMDEVKDGLRYIFQTENR---ATMCVSGSAHAGMEA 84 (396)
T ss_dssp BCCSSSSCCCCHHHHHHTTSCCCCTT------------CHHHHHHHHHHHHHHHHHHTCCCS---CEEEESSCHHHHHHH
T ss_pred eeecCCCCCCCHHHHHHhccccccCC------------ChhHHHHHHHHHHHHHHHhCCCCC---cEEEECCcHHHHHHH
Confidence 45556677789999999876543211 112223334467889999999863 134 44567789999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
++.++++|||+|+++++.|.++. + ...+...|.. ++.+++++ ++.+|++++++.+++.++++|++..++
T Consensus 85 ~~~~~~~~gd~vl~~~~~~~~~~---~---~~~~~~~g~~--~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~np 155 (396)
T 2ch1_A 85 MLSNLLEEGDRVLIAVNGIWAER---A---VEMSERYGAD--VRTIEGPP-DRPFSLETLARAIELHQPKCLFLTHGDSS 155 (396)
T ss_dssp HHHHHCCTTCEEEEEESSHHHHH---H---HHHHHHTTCE--EEEEECCT-TSCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHHhcCCCCeEEEEcCCcccHH---H---HHHHHHcCCc--eEEecCCC-CCCCCHHHHHHHHHhCCCCEEEEECCCCC
Confidence 99999999999999987655431 0 0122345654 44455553 567999999998875478988886554
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHHH
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~~ 338 (358)
+|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||++.||.| |++++++ ++.+
T Consensus 156 tG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~------~~~~ 224 (396)
T 2ch1_A 156 SGLLQPLEGVGQICHQHDCLLIVDAVASLCGV-----PFYMDKWEIDAVYTGAQKVLGAPPGITPISISP------KALD 224 (396)
T ss_dssp TTEECCCTTHHHHHHHTTCEEEEECTTTBTTB-----CCCTTTTTCCEEECCCC-CCCCCSSCEEEEECH------HHHH
T ss_pred CceecCHHHHHHHHHHcCCEEEEEccccccCC-----ccchhhcCcCEEEEcCCccccCCCCeEEEEECH------HHHH
Confidence 45678899999999999999999999986532 22333 679999999999988766 8888876 4555
Q ss_pred HHh
Q 018300 339 AIN 341 (358)
Q Consensus 339 ~i~ 341 (358)
++.
T Consensus 225 ~~~ 227 (396)
T 2ch1_A 225 VIR 227 (396)
T ss_dssp HHH
T ss_pred hhh
Confidence 554
No 37
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.78 E-value=6.7e-19 Score=167.64 Aligned_cols=192 Identities=14% Similarity=0.051 Sum_probs=138.2
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a 184 (358)
+.+.|++..+++.|++++...+... + +.... +....+++++++++|++++ ..+++++|++|+..+
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~--------~---~~~~~-~~~~~l~~~la~~~g~~~~---~i~~~~g~t~a~~~~ 67 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHH--------R---TEAAR-EVFLKARGLLREAFRTEGE---VLILTGSGTLAMEAL 67 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCT--------T---SHHHH-HHHHHHHHHHHHHHTCSSE---EEEEESCHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCCc--------c---CHHHH-HHHHHHHHHHHHHhCCCCc---eEEEcCchHHHHHHH
Confidence 5677899999999999998765311 1 11222 2333467889999999753 234556778899999
Q ss_pred HHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--
Q 018300 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (358)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~-- 262 (358)
+.++++|||+|+++++.|.++. + ...+...|. +++.+++++ ++.+|++++++ .++++|++..+++
T Consensus 68 ~~~~~~~gd~vl~~~~~~~~~~---~---~~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~----~~~~~v~~~~~~npt 134 (352)
T 1iug_A 68 VKNLFAPGERVLVPVYGKFSER---F---YEIALEAGL--VVERLDYPY-GDTPRPEDVAK----EGYAGLLLVHSETST 134 (352)
T ss_dssp HHHHCCTTCEEEEEECSHHHHH---H---HHHHHHTTC--EEEEEECCT-TCCCCTTTSCC----SSCSEEEEESEETTT
T ss_pred HHhccCCCCeEEEEeCCchhHH---H---HHHHHHcCC--ceEEEeCCC-CCCCCHHHHhc----cCCcEEEEEEecCCc
Confidence 9999999999999887554432 1 011223465 444555553 46788888876 3688888766554
Q ss_pred CCCCCHHHHHHHHHHc--CCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 263 PRDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|...|+++|.++|+++ |+++++|++|+.|.. +.++. ++|++++|+||++.||.| |+++++++
T Consensus 135 G~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~ 201 (352)
T 1iug_A 135 GALADLPALARAFKEKNPEGLVGADMVTSLLVG-----EVALEAMGVDAAASGSQKGLMCPPGLGFVALSPR 201 (352)
T ss_dssp TEECCHHHHHHHHHHHCTTCEEEEECTTTBTTB-----CCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred ceecCHHHHHHHHHhhCCCCEEEEECCccccCc-----ceeccccCeeEEEecCcccccCCCceeEEEECHH
Confidence 5688999999999999 999999999986543 22233 689999999999988876 88888764
No 38
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.78 E-value=4.1e-18 Score=166.89 Aligned_cols=220 Identities=16% Similarity=0.142 Sum_probs=151.8
Q ss_pred cccChHHHHHHHHHHHHhh----h--ccccc----------ccCCC----CcHHHHHHHhhhhhcccCCCCCCCcCCCCc
Q 018300 84 GEADPEVCEIITKEKERQF----K--SLELI----------ASENF----TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN 143 (358)
Q Consensus 84 ~~~d~~~~~~i~~e~~~~~----~--~i~li----------as~n~----~s~~V~~al~~~l~~~~~~G~pg~r~~~G~ 143 (358)
+.++++++..+++.+.+.. + .+.+. .++++ .+|.|.+++...+. +|..++.+.+...|.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~-~~~~~~~~~~~~~g~ 102 (409)
T 3kki_A 24 PQLPDFIQNKIDHYIENYFDINKNGKHLVLGKQASPDDIILQSNDYLALANHPLIKARLAKSLL-EEQQSLFMSASFLQN 102 (409)
T ss_dssp CCCCHHHHHHHHHHHHHHTTTSTTSSCTTCCCCCCTTSEECCCSCTTCCTTCHHHHHHHHHHHH-SCCCCCCSBGGGGCS
T ss_pred ccchHHHHHHHHHHHHHHhhhccCCCeeeeCCCCCCceEEeeccCccCCcCCHHHHHHHHHHHH-HcCCCCCccccccCC
Confidence 6788899988876554421 1 12211 22332 48999999988765 343333333323232
Q ss_pred -HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCc
Q 018300 144 -EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 144 -~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
+..++ +++++++++|.+. .+++++|++|+..++.++++|||+|++.++.|+++.. .+...|.
T Consensus 103 ~~~~~~----l~~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~ 165 (409)
T 3kki_A 103 DYDKPM----IEKRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWE--------GARYANA 165 (409)
T ss_dssp TTTSCH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHH--------HHHHTTC
T ss_pred cHHHHH----HHHHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHH--------HHHHcCC
Confidence 22223 4566888999875 3677999999999999999999999998876654321 2344555
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEecccccccccc-CC-c
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-V 298 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~-~ 298 (358)
++++++ .+|+++|++.+.+.++++|++..+++ |...|+++|.++|+++|++|++|++|+.|.... +. .
T Consensus 166 --~~~~~~------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~ 237 (409)
T 3kki_A 166 --QAHPFM------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGL 237 (409)
T ss_dssp --EEEEEC------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCH
T ss_pred --eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcc
Confidence 344432 26899999998766689998876654 568899999999999999999999998664421 11 0
Q ss_pred --cCCCC-CCcEEEEcCcCcCccCcEEEEEEeCCC
Q 018300 299 --ADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP 330 (358)
Q Consensus 299 --~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~ 330 (358)
...+. ..|+++.|++|+++++ ||+++++++.
T Consensus 238 ~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~~ 271 (409)
T 3kki_A 238 LAELGLTREVHFMTASLAKTFAYR-AGAIWCNNEV 271 (409)
T ss_dssp HHHHTCGGGCSEEEEESSSTTCSS-CEEEEESSSG
T ss_pred hhhcCCCCCCCEEEeecchhhCCC-ceEEEECHHH
Confidence 01122 5789999999999766 8999998863
No 39
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.78 E-value=3e-18 Score=166.02 Aligned_cols=206 Identities=16% Similarity=0.167 Sum_probs=142.7
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCc-CCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCCHHHHHHHHHHh-
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSPANFEVYTAI- 188 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r-~~~G~~~~~~lE~~~~~~la~lfg~-~~~~~~v~V~~~SGt~A~~~a~~al- 188 (358)
...++.|++++...+.+.+ +++... +..+....... ..+++++++++|. +++ ..+++++||+|+..++.++
T Consensus 33 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~l~~~la~~~~~~~~~---~v~~~~g~t~a~~~~~~~~~ 106 (406)
T 1kmj_A 33 AQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKM-ENVRKRASLFINARSAE---ELVFVRGTTEGINLVANSWG 106 (406)
T ss_dssp CCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHHHHHH-HHHHHHHHHHTTCSCGG---GEEEESSHHHHHHHHHHHTH
T ss_pred CCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHHHHHHH-HHHHHHHHHHcCCCCCC---eEEEeCChhHHHHHHHHHhh
Confidence 3678999999988776542 223210 11111122233 3467889999998 443 2344556678999999999
Q ss_pred ---ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CC
Q 018300 189 ---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YP 263 (358)
Q Consensus 189 ---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~ 263 (358)
++|||+|+++++.|.+.... +. ..+...|. +++.+++++ ++.+|+++|++.+.. ++++|++..++ +|
T Consensus 107 ~~~~~~gd~vl~~~~~~~~~~~~-~~---~~~~~~g~--~~~~~~~~~-~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG 178 (406)
T 1kmj_A 107 NSNVRAGDNIIISQMEHHANIVP-WQ---MLCARVGA--ELRVIPLNP-DGTLQLETLPTLFDE-KTRLLAITHVSNVLG 178 (406)
T ss_dssp HHHCCTTCEEEEETTCCGGGTHH-HH---HHHHHHTC--EEEEECBCT-TSCBCGGGHHHHCCT-TEEEEEEESBCTTTC
T ss_pred hhcCCCCCEEEEecccchHHHHH-HH---HHHHhCCC--EEEEEecCC-CCCcCHHHHHHHhcc-CCeEEEEeCCCcccc
Confidence 89999999998877654321 10 11233455 444555653 567999999998864 78888876554 46
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHHHHH
Q 018300 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (358)
Q Consensus 264 ~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~~~i 340 (358)
...|+++|.++|+++|+++++|++|+.|.. +..+. +.|++++|+||++ ||.| |++++++ ++.+++
T Consensus 179 ~~~~l~~i~~l~~~~~~~li~D~~~~~g~~-----~~~~~~~~~d~~~~s~~K~~-g~~G~G~~~~~~------~~~~~~ 246 (406)
T 1kmj_A 179 TENPLAEMITLAHQHGAKVLVDGAQAVMHH-----PVDVQALDCDFYVFSGHKLY-GPTGIGILYVKE------ALLQEM 246 (406)
T ss_dssp CBCCHHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHTCSEEEEEGGGTT-SCTTCEEEEECH------HHHHHC
T ss_pred CcCCHHHHHHHHHHcCCEEEEEchhhcCCC-----CCcccccCCCEEEEEchhcc-CCCCcEEEEEeH------HHHhhc
Confidence 788999999999999999999999986532 11222 7899999999987 7776 9999876 676666
Q ss_pred hhc
Q 018300 341 NNA 343 (358)
Q Consensus 341 ~~~ 343 (358)
...
T Consensus 247 ~~~ 249 (406)
T 1kmj_A 247 PPW 249 (406)
T ss_dssp CCS
T ss_pred CCc
Confidence 543
No 40
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.78 E-value=2.5e-18 Score=166.82 Aligned_cols=191 Identities=14% Similarity=0.132 Sum_probs=142.0
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-ccC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al-l~p 191 (358)
..++.+++++...+.+.+ +..+ +...+ .++.+++++|.+. .++++||++|+..++.++ ++|
T Consensus 17 ~~~~~~~~a~~~~~~~~~--------~~~~-~~~~~----l~~~la~~~~~~~-----~~~~~~gt~al~~~~~~~~~~~ 78 (393)
T 1mdo_A 17 AMGAEELAAVKTVLDSGW--------ITTG-PKNQE----LEAAFCRLTGNQY-----AVAVSSATAGMHIALMALGIGE 78 (393)
T ss_dssp CCCHHHHHHHHHHHHHTC--------CSSS-HHHHH----HHHHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHhcCC--------cCCC-hHHHH----HHHHHHHHhCCCc-----EEEecChHHHHHHHHHHcCCCC
Confidence 356888999887775432 1112 32333 4556888999864 366788999999999999 999
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHH
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRM 271 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I 271 (358)
||+|+++++.|.++.. .+...|. +++.++++++++.+|++++++.++. ++++|++.. .+|...|+++|
T Consensus 79 gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~-~~G~~~~~~~i 146 (393)
T 1mdo_A 79 GDEVITPSMTWVSTLN--------MIVLLGA--NPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPVH-YAGAPADLDAI 146 (393)
T ss_dssp TCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCBC-GGGCCCCHHHH
T ss_pred CCEEEeCCCccHhHHH--------HHHHCCC--EEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEeC-CCCCcCCHHHH
Confidence 9999999887665421 2345565 4555667655568999999998864 688887753 46777899999
Q ss_pred HHHHHHcCCEEEEeccccccccccCCccCCCCC-CcEEEEcCc--CcCccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 272 RQIADAVGALLMMDMAHISGLVAASVVADPFKY-CDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 272 ~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~g-aDiv~~S~h--K~L~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.++|+++|+++++|++|+.|....+. ++ + .|++++|+| |+|+|++||+++++++ ++.+++..
T Consensus 147 ~~l~~~~~~~li~D~a~~~g~~~~~~---~~-~~~d~~~~S~~k~K~l~~~~~g~~~~~~~-----~~~~~l~~ 211 (393)
T 1mdo_A 147 YALGERYGIPVIEDAAHATGTSYKGR---HI-GARGTAIFSFHAIKNITCAEGGIVVTDNP-----QFADKLRS 211 (393)
T ss_dssp HHHHHHHTCCBCEECTTCTTCEETTE---ET-TSSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHHHH
T ss_pred HHHHHHcCCeEEEECccccCCeECCe---ec-CCCCeEEEeCCCCCccccccceEEEeCCH-----HHHHHHHH
Confidence 99999999999999999987654321 11 3 899999999 9998889999999754 56666654
No 41
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.78 E-value=1.9e-18 Score=171.50 Aligned_cols=168 Identities=14% Similarity=0.063 Sum_probs=124.9
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.+.|+ +++..+++|+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++......
T Consensus 73 ~~~y~r~--~~p~~~~le~----~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~-- 139 (415)
T 2fq6_A 73 ELFYGRR--GTLTHFSLQQ----AMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCS-- 139 (415)
T ss_dssp SCCCTTT--CCHHHHHHHH----HHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHH--
T ss_pred CccccCC--CCchHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH--
Confidence 4544443 5565555554 5888999864 3667899999999999999999999999988876532100
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHH--cCCEEEEeccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADA--VGALLMMDMAH 288 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e--~g~~livD~Ah 288 (358)
..+...|. ++..++. .|++++++.+++ ++|+|++..+++ +...|+++|.++|++ +|+++++|++|
T Consensus 140 --~~l~~~G~--~v~~v~~------~d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~ 208 (415)
T 2fq6_A 140 --KILSKLGV--TTSWFDP------LIGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTW 208 (415)
T ss_dssp --HTGGGGTC--EEEEECT------TCGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTT
T ss_pred --HHHHHcCc--EEEEECC------CCHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCC
Confidence 11223454 4444332 278999988864 689998876665 568999999999999 99999999999
Q ss_pred cccccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCC
Q 018300 289 ISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (358)
Q Consensus 289 ~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~ 329 (358)
+.+.. ..|++ ++|++++|+||+++|+. ||+++++++
T Consensus 209 a~~~~-----~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~ 248 (415)
T 2fq6_A 209 AAGVL-----FKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNAR 248 (415)
T ss_dssp TTTTS-----SCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTT
T ss_pred ccccc-----CCccccCCeEEEEeCccccCCCCCceEEEEEeCHH
Confidence 86532 23556 89999999999998764 799998875
No 42
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.78 E-value=3.4e-18 Score=167.38 Aligned_cols=200 Identities=15% Similarity=0.187 Sum_probs=141.2
Q ss_pred ccCCCCcHHHHHHHhhhhh--cccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLT--NKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~--~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~ 185 (358)
++...+++.|++++...+. +.+ ++|.. .+..+.. ..+..+.+++++++++|+++++ .+++++|++|+.+++
T Consensus 29 ~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~~---v~~~~ggt~a~~~a~ 102 (423)
T 3lvm_A 29 SATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQ-AEEAVDIARNQIADLVGADPRE---IVFTSGATESDNLAI 102 (423)
T ss_dssp TTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHH-HHHHHHHHHHHHHHHHTCCGGG---EEEESSHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHH-HHHHHHHHHHHHHHHcCCCCCe---EEEeCChHHHHHHHH
Confidence 4555789999999988776 444 44443 2222222 2334445788899999998642 345567788999999
Q ss_pred HHhcc----CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 018300 186 TAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (358)
Q Consensus 186 ~all~----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~ 261 (358)
.++.+ |||+|+++++.|.++... ...+...|. +++.+++++ ++.+|+++|++.+++ ++++|++..++
T Consensus 103 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~-----~~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~~ 173 (423)
T 3lvm_A 103 KGAANFYQKKGKHIITSKTEHKAVLDT-----CRQLEREGF--EVTYLAPQR-NGIIDLKELEAAMRD-DTILVSIMHVN 173 (423)
T ss_dssp HHHHHHHTTTCCEEEEETTSCHHHHHH-----HHHHHHTTC--EEEEECCCT-TSCCCHHHHHHHCCT-TEEEEECCSBC
T ss_pred HHHHHhhccCCCEEEECCccchHHHHH-----HHHHHHcCC--EEEEeccCC-CCccCHHHHHHhcCC-CcEEEEEeCCC
Confidence 88874 899999998876654221 011123455 445555664 678999999999865 78888876544
Q ss_pred --CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCc-EEEEEEeCC
Q 018300 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKD 329 (358)
Q Consensus 262 --~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~-GG~I~~~~~ 329 (358)
+|...|+++|.++|+++|++|++|++|+.|.. +..+. ++|++++|+||++ ||. .|+++++++
T Consensus 174 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----~~~~~~~~~di~~~s~sK~~-g~~g~G~~~~~~~ 240 (423)
T 3lvm_A 174 NEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKL-----PIDLSQLKVDLMSFSGHKIY-GPKGIGALYVRRK 240 (423)
T ss_dssp TTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCTTTSCCSEEEEESTTTT-SCSSCEEEEECBT
T ss_pred CCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCC-----CcChhhcCCCEEEechHHhc-CCCCeEEEEEecc
Confidence 46788999999999999999999999986543 22222 6899999999965 554 488888865
No 43
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.78 E-value=5.5e-18 Score=162.98 Aligned_cols=199 Identities=16% Similarity=0.167 Sum_probs=140.2
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all 189 (358)
+...+++.|++++...+.+.|. .+...+..+....+ .....++++++++|++++ ..+++.+|++|+..++.++.
T Consensus 9 ~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 9 ATTRVDDRVLEEMIVFYREKYG--NPNSAHGMGIEANL-HMEKAREKVAKVLGVSPS---EIFFTSCATESINWILKTVA 82 (384)
T ss_dssp TCCCCCHHHHHHHHHHHHTCCC--CTTCSSHHHHHHHH-HHHHHHHHHHHHHTSCGG---GEEEESCHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcCC--CCccccHHHHHHHH-HHHHHHHHHHHHcCCCCC---eEEEECCHHHHHHHHHHhhh
Confidence 3447899999999988765442 23221211222222 333467889999998754 23455667889999999987
Q ss_pred ----cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--C
Q 018300 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--P 263 (358)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~ 263 (358)
+|||+|+++++.|.++... ...+...|. +++.+++++ ++.+|+++|++.++. ++++|++..+++ |
T Consensus 83 ~~~~~~gd~vl~~~~~~~~~~~~-----~~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG 153 (384)
T 1eg5_A 83 ETFEKRKRTIITTPIEHKAVLET-----MKYLSMKGF--KVKYVPVDS-RGVVKLEELEKLVDE-DTFLVSIMAANNEVG 153 (384)
T ss_dssp HHTTTTCCEEEECTTSCHHHHHH-----HHHHHHTTC--EEEECCBCT-TSCBCHHHHHHHCCT-TEEEEEEESBCTTTC
T ss_pred hhccCCCCEEEECCCCchHHHHH-----HHHHHhcCC--EEEEEccCC-CCccCHHHHHHHhCC-CCeEEEEECCCCCcc
Confidence 7999999998766543211 111234465 455666663 578999999998864 788888765554 5
Q ss_pred CCCCHHHHHHHHHHcC--CEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 264 RDFDYPRMRQIADAVG--ALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 264 ~~~dl~~I~~ia~e~g--~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
...|+++|.++|+++| +++++|++|+.|.. +..+. ++|++++|+||+ .||.| |+++++++
T Consensus 154 ~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~-----~~~~~~~~~di~~~s~sK~-~g~~G~G~~~~~~~ 218 (384)
T 1eg5_A 154 TIQPVEDVTRIVKKKNKETLVHVDAVQTIGKI-----PFSLEKLEVDYASFSAHKF-HGPKGVGITYIRKG 218 (384)
T ss_dssp BBCCHHHHHHHHHHHCTTCEEEEECTTTTTTS-----CCCCTTTCCSEEEEEGGGG-TSCTTCEEEEECTT
T ss_pred cccCHHHHHHHHHhcCCceEEEEEhhhhcCCc-----ccCchhcCCCEEEecHHHh-cCCCceEEEEEcCC
Confidence 6889999999999999 99999999985532 22233 689999999997 56765 99999875
No 44
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.77 E-value=4.4e-18 Score=165.65 Aligned_cols=197 Identities=20% Similarity=0.216 Sum_probs=140.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G-~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.++.|++++...+.. +..++.+.+|..| .+.. ...++++++++|++. .++++||+.|+..++.++++||
T Consensus 60 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~----~~l~~~la~~~g~~~-----~i~~~sGs~a~~~~~~~~~~~g 129 (401)
T 1fc4_A 60 NHPDLIAAAKAGMDS-HGFGMASVRFICGTQDSH----KELEQKLAAFLGMED-----AILYSSCFDANGGLFETLLGAE 129 (401)
T ss_dssp TCHHHHHHHHHHHHH-HCSCCCSCHHHHCCBHHH----HHHHHHHHHHHTCSE-----EEEESCHHHHHHTTHHHHCCTT
T ss_pred CCHHHHHHHHHHHHH-hCCCCCCCCcccCCcHHH----HHHHHHHHHHhCCCc-----EEEeCChHHHHHHHHHHHcCCC
Confidence 389999999887643 3334444344322 2322 235667889999873 4778999999999999999999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCC--CCCC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASA--YPRD 265 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-----~~klIi~~~s~--~~~~ 265 (358)
|+|++.++.|+++.. .+...|. ++++++ .+|++++++.++.. ++++|++..++ +|..
T Consensus 130 d~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~ 193 (401)
T 1fc4_A 130 DAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVI 193 (401)
T ss_dssp CEEEEETTCCHHHHH--------HHHTSCS--EEEEEC------TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEE
T ss_pred CEEEEcchhHHHHHH--------HHHHcCC--ceEEEC------CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCC
Confidence 999998876654321 2345565 344432 35889999887642 68888886554 4567
Q ss_pred CCHHHHHHHHHHcCCEEEEeccccccccc-cCCc-c--CCCC-CCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHH
Q 018300 266 FDYPRMRQIADAVGALLMMDMAHISGLVA-ASVV-A--DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (358)
Q Consensus 266 ~dl~~I~~ia~e~g~~livD~Ah~~Gl~~-~g~~-~--~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i 340 (358)
.++++|.++|+++|+++++|++|+.|+.. .+.. + ..+. +.|++++|+||++.|+.||++++++ ++.+++
T Consensus 194 ~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~~------~~~~~l 267 (401)
T 1fc4_A 194 ANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARK------EVVEWL 267 (401)
T ss_dssp CCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECH------HHHHHH
T ss_pred CCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEcCH------HHHHHH
Confidence 89999999999999999999999878763 2221 1 1222 6799999999999666699999976 566665
Q ss_pred hh
Q 018300 341 NN 342 (358)
Q Consensus 341 ~~ 342 (358)
..
T Consensus 268 ~~ 269 (401)
T 1fc4_A 268 RQ 269 (401)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 45
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.77 E-value=1.5e-18 Score=164.85 Aligned_cols=195 Identities=15% Similarity=0.068 Sum_probs=137.9
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCCHHHHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFE 183 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~-~SGt~A~~~ 183 (358)
+.+.|++..+++.|++++.+.+.+. + +... .+....+++++++++|.+.+ . ..+.+ ++|++|+..
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~~--------~---~~~~-~~~~~~l~~~la~~~g~~~~-~-~~v~~t~g~t~a~~~ 67 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRGH--------L---DPEV-LRVNRAIQERLAALFDPGEG-A-LVAALAGSGSLGMEA 67 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCCT--------T---CHHH-HHHHHHHHHHHHHHHCCCTT-C-EEEEESSCHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhcccccc--------c---CHHH-HHHHHHHHHHHHHHhCCCCC-C-ceEEEcCCcHHHHHH
Confidence 4577889999999999997655321 1 1222 23444578889999998611 1 13444 566789999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~- 262 (358)
++.++++ |+|+++++.|.++ .+ ...+...|..+ +.+++++ ++.+|++++++.+++.++++|++..+++
T Consensus 68 ~~~~~~~--d~vl~~~~~~~~~---~~---~~~~~~~g~~~--~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~np 136 (353)
T 2yrr_A 68 GLANLDR--GPVLVLVNGAFSQ---RV---AEMAALHGLDP--EVLDFPP-GEPVDPEAVARALKRRRYRMVALVHGETS 136 (353)
T ss_dssp HHHTCSC--CCEEEEECSHHHH---HH---HHHHHHTTCCE--EEEECCT-TSCCCHHHHHHHHHHSCCSEEEEESEETT
T ss_pred HHHHhcC--CcEEEEcCCCchH---HH---HHHHHHcCCce--EEEeCCC-CCCCCHHHHHHHHHhCCCCEEEEEccCCC
Confidence 9998876 8999887654432 11 01223456544 4445553 5679999999988754788888766554
Q ss_pred -CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 263 -~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||++.||.| |+++++++
T Consensus 137 tG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~ 202 (353)
T 2yrr_A 137 TGVLNPAEAIGALAKEAGALFFLDAVTTLGML-----PFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLE 202 (353)
T ss_dssp TTEECCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHH
T ss_pred cceecCHHHHHHHHHHcCCeEEEEcCcccccc-----cccccccCceEEEecCcccccCCCceEEEEECHH
Confidence 5678999999999999999999999975532 22333 689999999999988766 89998873
No 46
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.77 E-value=4.7e-18 Score=165.58 Aligned_cols=205 Identities=19% Similarity=0.155 Sum_probs=141.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCCHHHHHHHHHHh--
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSPANFEVYTAI-- 188 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~-~~~~~~v~V~~~SGt~A~~~a~~al-- 188 (358)
..++.|++++...+.+.+ +++.. .+..+......++ .+++++++++|. +++ ..+++.+|+.|+..++.++
T Consensus 39 ~~~~~v~~a~~~~~~~~~--~~~~~~~~~y~~~~~~~~~-~l~~~la~~~~~~~~~---~v~~~~g~t~a~~~~~~~~~~ 112 (420)
T 1t3i_A 39 QKPRAVLEKLMHYYENDN--ANVHRGAHQLSVRATDAYE-AVRNKVAKFINARSPR---EIVYTRNATEAINLVAYSWGM 112 (420)
T ss_dssp CCCHHHHHHHHHHHHHTC--CCC--CCSHHHHHHHHHHH-HHHHHHHHHTTCSCGG---GEEEESSHHHHHHHHHHHTHH
T ss_pred CCCHHHHHHHHHHHHhcc--CCCCcccchHHHHHHHHHH-HHHHHHHHHcCCCCCC---eEEEcCChHHHHHHHHHHhhh
Confidence 678999999988776532 22221 1111211123333 367789999998 443 2355667788999999999
Q ss_pred --ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CCC
Q 018300 189 --LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YPR 264 (358)
Q Consensus 189 --l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~~ 264 (358)
++|||+|+++++.|.++... +. ..+...|. +++.++++ +++.+|++++++.++. ++++|++..++ +|.
T Consensus 113 ~~~~~gd~Vl~~~~~~~~~~~~-~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~ 184 (420)
T 1t3i_A 113 NNLKAGDEIITTVMEHHSNLVP-WQ---MVAAKTGA--VLKFVQLD-EQESFDLEHFKTLLSE-KTKLVTVVHISNTLGC 184 (420)
T ss_dssp HHCCTTCEEEEETTCCGGGTHH-HH---HHHHHHCC--EEEEECBC-TTSSBCHHHHHHHCCT-TEEEEEEESBCTTTCB
T ss_pred cccCCCCEEEECcchhHHHHHH-HH---HHHHhcCc--EEEEeccC-CCCCcCHHHHHHhhCC-CceEEEEeCCcccccC
Confidence 89999999998877664210 10 11223454 44555565 4567999999998864 78888876654 467
Q ss_pred CCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHHHHHh
Q 018300 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 265 ~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~~~i~ 341 (358)
..|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||.+ ||.| |++++++ ++.+++.
T Consensus 185 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~sK~~-~~~g~G~~~~~~------~~~~~~~ 252 (420)
T 1t3i_A 185 VNPAEEIAQLAHQAGAKVLVDACQSAPHY-----PLDVQLIDCDWLVASGHKMC-APTGIGFLYGKE------EILEAMP 252 (420)
T ss_dssp BCCHHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHTCSEEEEEGGGTT-SCTTCEEEEECH------HHHHHSC
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhccCCc-----cCchhhcCCCEEEEehhhhc-CCCceEEEEEch------HHHhhcC
Confidence 88999999999999999999999987643 11222 7899999999954 5554 8888876 6767665
Q ss_pred hc
Q 018300 342 NA 343 (358)
Q Consensus 342 ~~ 343 (358)
..
T Consensus 253 ~~ 254 (420)
T 1t3i_A 253 PF 254 (420)
T ss_dssp CC
T ss_pred ce
Confidence 54
No 47
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.77 E-value=1.3e-18 Score=167.57 Aligned_cols=201 Identities=13% Similarity=0.073 Sum_probs=138.6
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCC-CCcceEEeCCCHHHH
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPAN 181 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~-~~~v~V~~~SGt~A~ 181 (358)
+.+.+.|++..+++.|++++...+.+. + .....+.++ ..+++++++++.... +....+++++|++|+
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~~~---~--------~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al 72 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSLGH---T--------SPEFVSIFQ-RVLKNTRAVFKSAAASKSQPFVLAGSGTLGW 72 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCCCT---T--------SHHHHHHHH-HHHHHHHHHTTCCGGGTCEEEEEESCTTHHH
T ss_pred cceeecCCCcCchHHHHHHHhcccccc---C--------CHHHHHHHH-HHHHHHHHHhCCCCCCCCceEEEcCchHHHH
Confidence 446778888999999999987543321 1 112222233 356778888876410 011235566788999
Q ss_pred HHHHHHhc---cCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee-cCCCCCCCHHHHHHHhhhcCCeEEEE
Q 018300 182 FEVYTAIL---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIA 257 (358)
Q Consensus 182 ~~a~~all---~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~iD~d~le~~i~~~~~klIi~ 257 (358)
..++.++. +|||+|++++..+.+ ... ...+...|. +++.+++ + +++.+|+++|++.+++.++++|++
T Consensus 73 ~~~~~~~~~~~~~gd~vlv~~~~~~~----~~~--~~~~~~~g~--~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~~v~~ 143 (385)
T 2bkw_A 73 DIFASNFILSKAPNKNVLVVSTGTFS----DRF--ADCLRSYGA--QVDVVRPLK-IGESVPLELITEKLSQNSYGAVTV 143 (385)
T ss_dssp HHHHHHHSCTTCSCCEEEEECSSHHH----HHH--HHHHHHTTC--EEEEECCSS-TTSCCCHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHhccCCCCCeEEEEcCCcch----HHH--HHHHHHcCC--ceEEEecCC-CCCCCCHHHHHHHHhcCCCCEEEE
Confidence 99999987 899999887432111 110 012334565 4445555 4 457899999999887547898887
Q ss_pred cCCC--CCCCCCHHHHHHHHHHc--CCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 258 GASA--YPRDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 258 ~~s~--~~~~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
..++ +|...|+++|.++|+++ |+++++|++|+.|.. +.++. ++|++++|+||++.||.| |+++++++
T Consensus 144 ~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~ 217 (385)
T 2bkw_A 144 THVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCE-----EFEFDEWGVDFALTASQKAIGAPAGLSISLCSSR 217 (385)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTS-----CCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred EccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCc-----cccccccCceEEEecCccccccCCcceEEEEcHH
Confidence 6544 45688999999999999 999999999986543 22233 689999999999988877 89888774
No 48
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.77 E-value=3.5e-18 Score=167.54 Aligned_cols=195 Identities=17% Similarity=0.180 Sum_probs=130.5
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
+..+.+++++..+.+.+++.. +.+. ..+|...|+ +++..+++ ++++++++|.+. .++++||++|+..
T Consensus 29 ~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~r~--~~~~~~~l----~~~la~~~g~~~-----~i~~~sG~~a~~~ 95 (398)
T 1gc0_A 29 VPPVYQTATFTFPTVEYGAAC-FAGE-QAGHFYSRI--SNPTLNLL----EARMASLEGGEA-----GLALASGMGAITS 95 (398)
T ss_dssp SCCBCCCSCBCCC-------------------------CCHHHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHH
T ss_pred CCCccCCCccccCCHHHHHHh-hcCC-cCCCcccCC--CChHHHHH----HHHHHHHhCCCc-----EEEECCHHHHHHH
Confidence 445557788888888877752 2222 223444333 44544444 456888999873 4778999999999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~- 262 (358)
++.+++++||+|+++++.|+++..... ......|. ++..++. .|++++++.+++ ++++|++..+++
T Consensus 96 ~l~~~~~~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~------~d~~~l~~~i~~-~~~~v~~~~~~np 162 (398)
T 1gc0_A 96 TLWTLLRPGDEVLLGNTLYGCTFAFLH----HGIGEFGV--KLRHVDM------ADLQALEAAMTP-ATRVIYFESPANP 162 (398)
T ss_dssp HHHHHCCTTCEEEEESSCCSHHHHHHH----HTGGGGTC--EEEEECT------TCHHHHHHHCCT-TEEEEEEESSCTT
T ss_pred HHHHHhcCCCEEEEeCCCchhHHHHHH----HHHHHcCC--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCC
Confidence 999999999999999988776532110 00123454 3444332 389999998864 789988876654
Q ss_pred -CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCC
Q 018300 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (358)
Q Consensus 263 -~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~ 329 (358)
|...|+++|.++|+++|+++++|++|+.+... .++. ++|++++|+||+++||. ||+++++++
T Consensus 163 tG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~ 229 (398)
T 1gc0_A 163 NMHMADIAGVAKIARKHGATVVVDNTYCTPYLQ-----RPLELGADLVVHSATKYLSGHGDITAGIVVGSQA 229 (398)
T ss_dssp TCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHC-----CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHH
T ss_pred CcccccHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCceEEEECCccccCCCCCCeEEEEEEChH
Confidence 56889999999999999999999999876542 3445 79999999999998775 699988874
No 49
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.77 E-value=1.8e-17 Score=160.66 Aligned_cols=237 Identities=11% Similarity=-0.003 Sum_probs=155.1
Q ss_pred cccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
++++..+++..+..+.+...+...-+++...++ ..++.+.+++...+.... .+|+. ..|. .++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~---~~g~---~~l~~~la~~~ 76 (389)
T 1gd9_A 4 SDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-THYGP---NIGL---LELREAIAEKL 76 (389)
T ss_dssp HHHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSCCC---TTCC---HHHHHHHHHHH
T ss_pred hhHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CCCCC---CCCc---HHHHHHHHHHH
Confidence 345555666555444444333334556654444 358899999988775421 23332 1122 35777777777
Q ss_pred HHHcCC--CCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-
Q 018300 158 LAAFNL--DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES- 234 (358)
Q Consensus 158 a~lfg~--~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~- 234 (358)
.+.+|. ++++ ..+++++|++|+..++.++++|||+|++.++.|.++.. .+...|.. ++.++++++
T Consensus 77 ~~~~g~~~~~~~--~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~--~~~v~~~~~~ 144 (389)
T 1gd9_A 77 KKQNGIEADPKT--EIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGGK--PVEVPTYEED 144 (389)
T ss_dssp HHHHCCCCCTTT--SEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTCE--EEEEECCGGG
T ss_pred HHHhCCCCCCCC--eEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCE--EEEeccCCcc
Confidence 777785 4431 03556677899999999999999999999887765421 23345654 444445532
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCC---CHHHHHHHHHHcCCEEEEeccccccccccCC-ccC--CC---C
Q 018300 235 TGLVDYDMLEKTAILFRPKLIIAGASAY--PRDF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PF---K 303 (358)
Q Consensus 235 ~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~--pl---~ 303 (358)
+..+|++++++.++. ++++|++..+++ |... ++++|.++|+++|+++++|++|+.+.. .+. .+. .+ .
T Consensus 145 ~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~ 222 (389)
T 1gd9_A 145 EFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIY-DDARHYSIASLDGMF 222 (389)
T ss_dssp TTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBC-TTCCCCCGGGSTTCG
T ss_pred CCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhccc-CCCCCCCHhhccCCC
Confidence 346899999998864 688887765554 4455 589999999999999999999985433 222 111 12 1
Q ss_pred CCcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 304 YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 304 gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
+.|+++.|+||++ +|.|.|++++++ ++.+++...
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~ 258 (389)
T 1gd9_A 223 ERTITVNGFSKTFAMTGWRLGFVAAPS------WIIERMVKF 258 (389)
T ss_dssp GGEEEEEESTTTTTCGGGCCEEEECCH------HHHHHHHHH
T ss_pred CCEEEEecChhhcCCcccceEEEEECH------HHHHHHHHH
Confidence 4689999999997 355679999876 566666543
No 50
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.77 E-value=1.3e-17 Score=169.12 Aligned_cols=222 Identities=15% Similarity=0.061 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHhh-hccccccc--CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC-
Q 018300 89 EVCEIITKEKERQF-KSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD- 164 (358)
Q Consensus 89 ~~~~~i~~e~~~~~-~~i~lias--~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~- 164 (358)
++++.++++..... ..+++ ++ ..++++.+.+++.+.+...+. ++ ...+...++|+.+++++++++|++
T Consensus 41 ~~~~~~~~~i~l~gnp~~~l-~s~~t~~~~~~v~~~l~~~~~~~~~--~~-----~~~p~~~~le~~~~~~la~l~g~~~ 112 (502)
T 3hbx_A 41 AAYQIINDELMLDGNPRLNL-ASFVTTWMEPECDKLIMSSINKNYV--DM-----DEYPVTTELQNRCVNMIAHLFNAPL 112 (502)
T ss_dssp HHHHHHHHHGGGSCCGGGBT-TCCSCCCCCHHHHHHHHHTTTCBTT--CT-----TTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhccCCCCCcee-ccccCCCCCHHHHHHHHHHhccCCC--Ch-----hcChhHHHHHHHHHHHHHHHhCCCc
Confidence 45666655543221 12222 22 356799999999887654331 11 223446789999999999999998
Q ss_pred -CCCCcceEEeCCCHHHHHHHHHHhccC--------CC-----EEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 165 -ENKWGVNVQPLSGSPANFEVYTAILKP--------HD-----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 165 -~~~~~v~V~~~SGt~A~~~a~~all~p--------GD-----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
+++....+.+++|++||+.++.++.++ || +|+++++.|.+ +. +.+...|..+ ..++
T Consensus 113 ~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s---~~-----~~~~~~G~~~--~~v~ 182 (502)
T 3hbx_A 113 EEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVC---WE-----KFARYFEVEL--KEVK 182 (502)
T ss_dssp CSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHH---HH-----HHHHHTTCEE--EEEC
T ss_pred ccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHH---HH-----HHHHHcCcee--EEEe
Confidence 433323345678889999998887655 87 89988764433 21 2344567644 4455
Q ss_pred ecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CCCCCCHHHHHHHHHHc------CCEEEEecccccccc--ccCCccC
Q 018300 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASA--YPRDFDYPRMRQIADAV------GALLMMDMAHISGLV--AASVVAD 300 (358)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~~~~dl~~I~~ia~e~------g~~livD~Ah~~Gl~--~~g~~~~ 300 (358)
++++++.+|+++|++.+.+ ++++|++..++ +|...|+++|.++|+++ |+++++|+||+.+.. ..+..+.
T Consensus 183 ~~~~~~~~d~~~l~~~i~~-~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~ 261 (502)
T 3hbx_A 183 LSEGYYVMDPQQAVDMVDE-NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (502)
T ss_dssp CBTTBCSCCHHHHHHHCCT-TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCC
T ss_pred cCCCcCcCCHHHHHHHHhh-CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccc
Confidence 6655589999999999875 67877664433 56788999999999999 999999999985432 1222222
Q ss_pred CC--CCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 301 PF--KYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 301 pl--~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.+ .++|++++++||++.+|.| |+++++++
T Consensus 262 ~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~ 293 (502)
T 3hbx_A 262 DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNK 293 (502)
T ss_dssp STTSTTEEEEEEETTTTTCCCSSCEEEEESSG
T ss_pred ccCCCCceEEEECcccccCCCCCeEEEEEeCH
Confidence 23 2899999999999977765 87777654
No 51
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.77 E-value=1.1e-18 Score=166.41 Aligned_cols=198 Identities=16% Similarity=0.093 Sum_probs=135.0
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
.+++.+++..+++.|++++.+.+ ++ ++ ..+.......+++++++++|. +.++...+++.+|++|+..
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~------~~---~~---~~~~~~~~~~l~~~la~~~g~-~~~~~~v~~~~g~t~a~~~ 71 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDS------CT---WD---DDYNIGVVEQIRQQLTALATA-SEGYTSVLLQGSGSYAVEA 71 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCC------CT---TS---HHHHTTTHHHHHHHHHHHHCS-SSSEEEEEEESCHHHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhh------cC---CC---HHHHHHHHHHHHHHHHHHhCC-CCcCcEEEEecChHHHHHH
Confidence 35666777778999999987632 11 11 111101222356778999993 3211123556678889999
Q ss_pred HHHHhccCCCEEEecC-CCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-CCeEEEEcCCC
Q 018300 184 VYTAILKPHDRIMGLD-LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASA 261 (358)
Q Consensus 184 a~~all~pGD~Vl~~~-~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-~~klIi~~~s~ 261 (358)
++.+++++||+|++.+ +.|++.+. ..+...|..+ ..++++ +++.+|+++|++.+++. ++++|++..++
T Consensus 72 ~~~~~~~~gd~vi~~~~~~~~~~~~-------~~~~~~g~~~--~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 141 (366)
T 1m32_A 72 VLGSALGPQDKVLIVSNGAYGARMV-------EMAGLMGIAH--HAYDCG-EVARPDVQAIDAILNADPTISHIAMVHSE 141 (366)
T ss_dssp HHHHSCCTTCCEEEEESSHHHHHHH-------HHHHHHTCCE--EEEECC-TTSCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred HHHHhcCCCCeEEEEeCCCccHHHH-------HHHHHhCCce--EEEeCC-CCCCCCHHHHHHHHhcCCCeEEEEEeccc
Confidence 9999999999988764 33322110 1223345543 444455 35679999999998764 57887665444
Q ss_pred C--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 262 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 262 ~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+ |...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||++.||.| |+++++++
T Consensus 142 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~ 209 (366)
T 1m32_A 142 TTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGI-----PMDIAALHIDYLISSANKCIQGVPGFAFVIAREQ 209 (366)
T ss_dssp TTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHH
T ss_pred CCcceecCHHHHHHHHHHcCCEEEEECCccccCc-----CccccccCccEEEecCcccccCCCceEEEEECHH
Confidence 4 6788999999999999999999999986643 22233 689999999999988877 99999873
No 52
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.77 E-value=1.5e-18 Score=168.58 Aligned_cols=199 Identities=15% Similarity=0.141 Sum_probs=140.7
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
++...+++.|++++...+.+.+ ++++..|..+.. ..++.+.+++++++++|++++ ..+++++|++|+..++.++
T Consensus 27 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~---~v~~~~g~t~al~~~~~~l 100 (400)
T 3vax_A 27 AATTRVDQRVADIVLHWMTAEF--GNAGSRHEYGIR-AKRGVERAREYLASTVSAEPD---ELIFTSGATESNNIALLGL 100 (400)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHHHHH-HHHHHHHHHHHHHHHTTCCGG---GEEEESCHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHhcc--CCCcccchhHHH-HHHHHHHHHHHHHHHcCCCCC---cEEEeCCHHHHHHHHHHHH
Confidence 4556789999999988876544 334332222222 233444578889999999864 2345556678999999998
Q ss_pred c----cCCC-EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--
Q 018300 189 L----KPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (358)
Q Consensus 189 l----~pGD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-- 261 (358)
+ +||| +|+++++.|.++.... ..+...|. ++..+++++ ++.+|+++|++.+++ ++++|++..++
T Consensus 101 ~~~~~~~gd~~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~~np 171 (400)
T 3vax_A 101 APYGERTGRRHIITSAIEHKAVLEPL-----EHLAGRGF--EVDFLTPGP-SGRISVEGVMERLRP-DTLLVSLMHVNNE 171 (400)
T ss_dssp HHHHHHHTCCEEEEETTSCHHHHHHH-----HHHHTTTC--EEEEECCCT-TCCCCHHHHHTTCCT-TEEEEECCSBCTT
T ss_pred HHhhccCCCCEEEECccccHhHHHHH-----HHHHhcCC--eEEEEccCC-CCCcCHHHHHHhcCC-CceEEEEECCCCC
Confidence 7 8999 9999887665543211 11223455 455555664 678999999998864 68888886655
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCC-CcEEEEcCcCcCccCcE-EEEE-EeC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY-CDVVTTTTHKSLRGPRG-GMIF-FKK 328 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~g-aDiv~~S~hK~L~Gp~G-G~I~-~~~ 328 (358)
+|...|+++|.++|+++|+++++|++|+.|... ..+.. +|++++|+|| +.||.| |+++ .++
T Consensus 172 tG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~ 235 (400)
T 3vax_A 172 TGVIQPVAELAQQLRATPTYLHVDAAQGYGKVP-----GDLTTPIDMISISGHK-IGAPKGVGALVTRRR 235 (400)
T ss_dssp TCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSG-----GGGGSCCSEEEEETGG-GTSCSSCEEEEECBC
T ss_pred ceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCC-----cChhhcCcEEEEeHHH-hCCCCceEEEEEecc
Confidence 456889999999999999999999999866432 11222 8999999999 566764 7777 766
No 53
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.77 E-value=3e-18 Score=167.61 Aligned_cols=202 Identities=20% Similarity=0.173 Sum_probs=144.7
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~ 183 (358)
-+++..+++..++.|++++...+... . |..+ +...+ .++.+++++|.+. .+++++|+.|+..
T Consensus 32 ~id~~~~~~~~~~~v~~a~~~~~~~~---~-----y~~~-~~~~~----l~~~la~~~~~~~-----~v~~~~Gt~a~~~ 93 (399)
T 2oga_A 32 FLDLKAAYEELRAETDAAIARVLDSG---R-----YLLG-PELEG----FEAEFAAYCETDH-----AVGVNSGMDALQL 93 (399)
T ss_dssp SCCHHHHHHHTHHHHHHHHHHHHHHT---C-----CSSS-HHHHH----HHHHHHHHTTSSE-----EEEESCHHHHHHH
T ss_pred ccccCcCCCCCCHHHHHHHHHHHhcC---C-----CCCc-hhHHH----HHHHHHHHHCCCe-----EEEecCHHHHHHH
Confidence 34555555555688999998776531 1 2222 32333 4556889999873 4678899999999
Q ss_pred HHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 018300 184 VYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (358)
Q Consensus 184 a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~ 262 (358)
++.++ ++|||+|+++++.|.++.. .+...|. ++..++++++++.+|++++++.++. ++++|+++. .+
T Consensus 94 ~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~n-~t 161 (399)
T 2oga_A 94 ALRGLGIGPGDEVIVPSHTYIASWL--------AVSATGA--TPVPVEPHEDHPTLDPLLVEKAITP-RTRALLPVH-LY 161 (399)
T ss_dssp HHHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCSSSSSBCHHHHHHHCCT-TEEEECCBC-GG
T ss_pred HHHHhCCCCcCEEEECCCccHHHHH--------HHHHCCC--EEEEEecCCCCCCcCHHHHHHhcCC-CCeEEEEeC-Cc
Confidence 99999 9999999999886655321 2345565 4455556654578999999998864 678887643 36
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCc--CcCccC-cEEEEEEeCCCCchhHHHH
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGP-RGGMIFFKKDPVLGVELES 338 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~h--K~L~Gp-~GG~I~~~~~~~~~~~~~~ 338 (358)
|...|+++|.++|+++|+++++|++|+.|....+. ++. ..|++++|+| |++++| +||+++++++ ++.+
T Consensus 162 G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~-----~~~~ 233 (399)
T 2oga_A 162 GHPADMDALRELADRHGLHIVEDAAQAHGARYRGR---RIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDP-----ELAE 233 (399)
T ss_dssp GCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTE---ETTCTTCEEEEECCTTSSSCCSSCCEEEEESCH-----HHHH
T ss_pred CCccCHHHHHHHHHHcCCEEEEECcccccCccCCe---ecccccCEEEEeCCCCccCCcCCceEEEEeCCH-----HHHH
Confidence 77889999999999999999999999877543221 222 4699999995 998653 8899998754 6666
Q ss_pred HHhhc
Q 018300 339 AINNA 343 (358)
Q Consensus 339 ~i~~~ 343 (358)
++...
T Consensus 234 ~l~~~ 238 (399)
T 2oga_A 234 RLRML 238 (399)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 54
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.77 E-value=1.1e-17 Score=165.49 Aligned_cols=190 Identities=18% Similarity=0.200 Sum_probs=138.9
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~-~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.++.|++++...+.. +..++++.++..|. +...+ .++++++++|.+. .++++||+.|+..++.+++++|
T Consensus 79 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~~~~~~----l~~~la~~~g~~~-----~i~~~sGs~a~~~al~~l~~~g 148 (427)
T 2w8t_A 79 FDPDVIAAGKEALEK-FGSGTCGSRMLNGTFHDHME----VEQALRDFYGTTG-----AIVFSTGYMANLGIISTLAGKG 148 (427)
T ss_dssp GCHHHHHHHHHHHHH-HCSCCCSCTTTTCCCHHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCTT
T ss_pred CCHHHHHHHHHHHHH-hCCCCcccccccCCcHHHHH----HHHHHHHHhCCCc-----eEEecCcHHHHHHHHHHhcCCC
Confidence 679999999887754 33456665555554 43333 4566888999863 4778999999999999999999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc---CCeEEEEcCCC--CCCCCC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLIIAGASA--YPRDFD 267 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~---~~klIi~~~s~--~~~~~d 267 (358)
|+|++..+.|+++.. .+...|. +++.++ .+|+++|++.++.. ++++|++...+ .|...|
T Consensus 149 d~vl~~~~~h~~~~~--------~~~~~g~--~~~~~~------~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~ 212 (427)
T 2w8t_A 149 EYVILDADSHASIYD--------GCQQGNA--EIVRFR------HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP 212 (427)
T ss_dssp CEEEEETTCCHHHHH--------HHHHSCS--EEEEEC------TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC
T ss_pred CEEEECCcccHHHHH--------HHHHcCC--eeEEeC------CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence 999998876655321 2344565 344433 36899999988753 67888886544 466789
Q ss_pred HHHHHHHHHHcCCEEEEecccccccccc-CC-cc--CCCC-CCcEEEEcCcCcCccCcEEEEEEeCCC
Q 018300 268 YPRMRQIADAVGALLMMDMAHISGLVAA-SV-VA--DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP 330 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~-~~--~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~ 330 (358)
+++|.++|+++|++|++|++|+.|.... +. .. ..+. ++|++++|+||+|+ +.||+++++++.
T Consensus 213 l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~gG~v~~~~~l 279 (427)
T 2w8t_A 213 LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TVGGFVVSNHPK 279 (427)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SCCEEEEECCTT
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cCCCEEEeCHHH
Confidence 9999999999999999999999765531 11 11 1122 67999999999985 788999998753
No 55
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.77 E-value=7.4e-18 Score=162.00 Aligned_cols=195 Identities=14% Similarity=0.123 Sum_probs=134.3
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al- 188 (358)
+...+++.|++++.+.+.+.+ .+| + +...+ +++.+++++|.+. .++++||+.|+..++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~------~-~~~~~----l~~~la~~~~~~~-----v~~~~ggt~al~~~~~~~~ 68 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ------G-KRSLL----FEEALCEFLGVKH-----ALVFNSATSALLTLYRNFS 68 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS------S-HHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHSS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC------C-hHHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhc
Confidence 456789999999988775432 122 2 22223 4566889999873 356778899999999999
Q ss_pred --ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCC
Q 018300 189 --LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266 (358)
Q Consensus 189 --l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~ 266 (358)
++|||+|+++++.|.++.. .+...|. +++.++++++ +.+|++++++.+++ ++++|++..+ +|...
T Consensus 69 ~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~-~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~~ 135 (375)
T 2fnu_A 69 EFSADRNEIITTPISFVATAN--------MLLESGY--TPVFAGIKND-GNIDELALEKLINE-RTKAIVSVDY-AGKSV 135 (375)
T ss_dssp CCCTTSCEEEECSSSCTHHHH--------HHHHTTC--EEEECCBCTT-SSBCGGGSGGGCCT-TEEEEEEECG-GGCCC
T ss_pred ccCCCCCEEEECCCccHhHHH--------HHHHCCC--EEEEeccCCC-CCCCHHHHHhhcCc-CceEEEEeCC-cCCcc
Confidence 8999999999887665432 2334565 5566667654 48999999988764 6787666544 78889
Q ss_pred CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEE--EEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVV--TTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 267 dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv--~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
|+++|.++|+++|+++++|++|+.|....+ ..+. ..|++ ++|.||++++.-||+++.+++ ++.+++...
T Consensus 136 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~---~~~~~~~~i~~~s~s~~K~~~~g~g~~~~~~~~-----~~~~~~~~~ 207 (375)
T 2fnu_A 136 EVESVQKLCKKHSLSFLSDSSHALGSEYQN---KKVGGFALASVFSFHAIKPITTAEGGAVVTNDS-----ELHEKMKLF 207 (375)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTCTTCEETT---EETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHHH
T ss_pred CHHHHHHHHHHcCCEEEEECccccCCeECC---eeccccCCeEEEeCCCCCCccccCceEEEeCCH-----HHHHHHHHH
Confidence 999999999999999999999987754322 1122 22555 555569984323344444444 566666553
No 56
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.76 E-value=3.5e-18 Score=168.21 Aligned_cols=205 Identities=15% Similarity=0.162 Sum_probs=131.2
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all 189 (358)
+...+++.|++++...+.+. .+||...|..+... .++.+.+++++++++|+++++ .+++++|++|+..++.+++
T Consensus 26 ~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~~---v~~~~g~t~a~~~~~~~~~ 99 (432)
T 3a9z_A 26 ATTPLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKA-KDIINTARASLAKMIGGKPQD---IIFTSGGTESNNLVIHSTV 99 (432)
T ss_dssp TCCCCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHH-HHHHHHHHHHHHHHHTCCGGG---EEEESCHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHh--cCCCccCcHHHHHH-HHHHHHHHHHHHHHcCCCcCe---EEEeCChHHHHHHHHHHHH
Confidence 34478999999998887653 35665444333222 233445788899999997541 2444455789999998875
Q ss_pred --------cCCCEEEecCCCCCccc-------cccccc-chhc-cccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCC
Q 018300 190 --------KPHDRIMGLDLPHGGHL-------SHGFMT-PKRR-VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP 252 (358)
Q Consensus 190 --------~pGD~Vl~~~~~~ggh~-------s~~~~~-~~~~-~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~ 252 (358)
+|||+|++.++.+.++. .|.... .+.. ....|. +++.++++++++.+|+++|++.++. ++
T Consensus 100 ~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~i~~-~~ 176 (432)
T 3a9z_A 100 RCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA--EVTFVPVSKVNGQVEVEDILAAVRP-TT 176 (432)
T ss_dssp HHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC--EEEEECCCTTTSSCCHHHHHHTCCT-TE
T ss_pred hhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc--EEEEEecCcccCCcCHHHHHHhccC-Cc
Confidence 59999988887665431 011000 0001 122355 4455556544678999999998864 68
Q ss_pred eEEEEcCCCC--CCCCCHHHHHHHHHHcC----------CEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCcc
Q 018300 253 KLIIAGASAY--PRDFDYPRMRQIADAVG----------ALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRG 318 (358)
Q Consensus 253 klIi~~~s~~--~~~~dl~~I~~ia~e~g----------~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~G 318 (358)
++|++..+++ |...|+++|.++|+++| +++++|++|+.|.. +..+. ++|++++|+||++ |
T Consensus 177 ~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g 250 (432)
T 3a9z_A 177 CLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKR-----RVDVEDLGVDFLTIVGHKFY-G 250 (432)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS-----CCCHHHHCCSEEEEEGGGTT-C
T ss_pred eEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCc-----ccChhhcCCCEEEEehhHhc-C
Confidence 8888876554 67899999999999999 99999999976532 21222 7899999999976 7
Q ss_pred CcEEEEEEeCC
Q 018300 319 PRGGMIFFKKD 329 (358)
Q Consensus 319 p~GG~I~~~~~ 329 (358)
|+.|+++++++
T Consensus 251 ~~~G~~~~~~~ 261 (432)
T 3a9z_A 251 PRIGALYVRGV 261 (432)
T ss_dssp CSCEEEEETTB
T ss_pred CcceEEEEccc
Confidence 88999999875
No 57
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.76 E-value=2.6e-18 Score=164.89 Aligned_cols=196 Identities=11% Similarity=-0.003 Sum_probs=133.2
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCC--CCcCCCCcHHHHHHHHHHHHH-HHHHcCCCCCCCcceEEeCCCHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLP--GKRYYGGNEYIDELETLCQKR-ALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~p--g~r~~~G~~~~~~lE~~~~~~-la~lfg~~~~~~~v~V~~~SGt~A~~~a~ 185 (358)
.+...+++.|++++...+......++. ....+...+ ....++++ +++++|.+ . .+++++|+.|+..++
T Consensus 16 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~la~~~~~~-~----v~~~~g~t~a~~~~~ 86 (371)
T 2e7j_A 16 QTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTP----PIHDFIHNQLPKFLGCD-V----ARVTNGAREAKFAVM 86 (371)
T ss_dssp HHTCCCCHHHHHHHHHC--------------------C----CHHHHHHTHHHHHTTSS-E----EEEESSHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHH----HHHHHHHHHHHHHcCCC-E----EEEeCChHHHHHHHH
Confidence 346678999999998776543211111 000011111 22335778 89999987 2 233444578999999
Q ss_pred HHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEece--ecCCCCCCCHHHHHHHhhh----cCCeEEEEcC
Q 018300 186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR--LDESTGLVDYDMLEKTAIL----FRPKLIIAGA 259 (358)
Q Consensus 186 ~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~iD~d~le~~i~~----~~~klIi~~~ 259 (358)
.++++|||+|+++++.|.++.. .+...|.. ++.++ +++ ++.+|+++|++.++. .++++|++..
T Consensus 87 ~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~--~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 87 HSLAKKDAWVVMDENCHYSSYV--------AAERAGLN--IALVPKTDYP-DYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp HHHCCTTCEEEEETTCCHHHHH--------HHHHTTCE--EEEECCCCTT-TCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred HHHhCCCCEEEEccCcchHHHH--------HHHHcCCe--EEEeecccCC-CCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 9999999999999886655422 23455654 44444 553 478999999998863 3678888766
Q ss_pred CC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccC-cEEEEEEeCC
Q 018300 260 SA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP-RGGMIFFKKD 329 (358)
Q Consensus 260 s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp-~GG~I~~~~~ 329 (358)
++ +|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||+|.+| ++|+++++++
T Consensus 156 ~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 156 PDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRM-----PVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEE 225 (371)
T ss_dssp SCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTB-----CCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTT
T ss_pred CCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCC-----CCChhhcCCCEEEecCCcCCCCCCCcEEEEEech
Confidence 54 45688999999999999999999999987643 11222 6899999999998776 4599999875
No 58
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.76 E-value=1.3e-17 Score=162.29 Aligned_cols=212 Identities=16% Similarity=0.089 Sum_probs=142.1
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCCCH
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 178 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~--~~~~~v~V~~~SGt 178 (358)
..+++...++ ..++.+++++...+... ..+|+.. .|. .++++.+.+++.+.+|++ ++ ..+++++|+
T Consensus 42 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g~---~~lr~~la~~~~~~~g~~~~~~---~v~~~~g~t 111 (389)
T 1o4s_A 42 DVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDP---RGI---YELREGIAKRIGERYKKDISPD---QVVVTNGAK 111 (389)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCT---TCC---HHHHHHHHHHHHHHHTCCCCGG---GEEEESHHH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CCC---HHHHHHHHHHHHHHhCCCCCHH---HEEEecCHH
Confidence 4456654444 35789999998876532 1233321 122 367777777777777863 32 234455667
Q ss_pred HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 018300 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (358)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~ 257 (358)
+|+..++.++++|||+|+++++.|.++.. .+...|.. ++.++++++ +..+|+++|++.++. ++++|++
T Consensus 112 ~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 180 (389)
T 1o4s_A 112 QALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGGT--VNVVETFMSKNFQPSLEEVEGLLVG-KTKAVLI 180 (389)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCE--EEEEECCGGGTTCCCHHHHHHTCCT-TEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCE--EEEEecCCccCCCCCHHHHHHhccc-CceEEEE
Confidence 89999999999999999999887665421 23445654 444455532 457899999998864 6888877
Q ss_pred cCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccC--CC---CCCcEEEEcCcCcC--ccCcEEEEE
Q 018300 258 GASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF---KYCDVVTTTTHKSL--RGPRGGMIF 325 (358)
Q Consensus 258 ~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl---~gaDiv~~S~hK~L--~Gp~GG~I~ 325 (358)
..+++ |...+ +++|.++|+++|+++++|++|+.+. ..+..++ .+ .+.|++++|+||++ +|.+.|+++
T Consensus 181 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~-~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~ 259 (389)
T 1o4s_A 181 NSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLV-YTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLI 259 (389)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSB-CSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEE
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEE
Confidence 65554 45555 8999999999999999999998543 3222111 11 25789999999998 455679999
Q ss_pred EeCCCCchhHHHHHHhh
Q 018300 326 FKKDPVLGVELESAINN 342 (358)
Q Consensus 326 ~~~~~~~~~~~~~~i~~ 342 (358)
+++ ++.+++..
T Consensus 260 ~~~------~~~~~l~~ 270 (389)
T 1o4s_A 260 SSE------KVATAVSK 270 (389)
T ss_dssp CCH------HHHHHHHH
T ss_pred eCH------HHHHHHHH
Confidence 876 45555543
No 59
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.76 E-value=1.4e-17 Score=166.87 Aligned_cols=161 Identities=17% Similarity=0.108 Sum_probs=121.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++..+++ ++++++++|.+. .+.++||++|+..++.+++++||+|+++++.|++..... . ..+...|
T Consensus 112 ~~~~~~~l----~~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~--~--~~~~~~G 178 (445)
T 1qgn_A 112 GNPTTVVL----EEKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFI--E--TILPKMG 178 (445)
T ss_dssp CCHHHHHH----HHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHH--H--HTGGGGT
T ss_pred CChHHHHH----HHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH--H--HHHHHcC
Confidence 44544444 456888999863 477899999999999999999999999988776643210 0 0123345
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCC-eEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRP-KLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~-klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
. ++..++.+ |++++++.+++ ++ ++|++..+++ |...|+++|.++|+++|+++++|++|+.+..
T Consensus 179 ~--~v~~v~~~------d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~----- 244 (445)
T 1qgn_A 179 I--TATVIDPA------DVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN----- 244 (445)
T ss_dssp C--EEEEECSS------CHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT-----
T ss_pred C--EEEEeCCC------CHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 5 34443332 89999999875 67 9998876665 4688999999999999999999999986642
Q ss_pred cCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCC
Q 018300 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (358)
Q Consensus 299 ~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~ 329 (358)
..+++ ++|++++|+||+++|+. +|+++++++
T Consensus 245 ~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~ 279 (445)
T 1qgn_A 245 QKALALGADLVLHSATKFLGGHNDVLAGCISGPLK 279 (445)
T ss_dssp CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHH
T ss_pred CCccccCCEEEEECCcccccccccceEEEEEECHH
Confidence 24566 89999999999998775 899999873
No 60
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.76 E-value=1.7e-17 Score=161.38 Aligned_cols=196 Identities=17% Similarity=0.169 Sum_probs=140.7
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al- 188 (358)
.....++.+++++...+...+ |+. .+..++ +++.+++++|.+. .++++|||.|+..++.++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~--------~~~-~~~~~~----l~~~la~~~~~~~-----~i~~~sGt~a~~~al~~~~ 70 (390)
T 3b8x_A 9 ASSTWDDLEYKAIQSVLDSKM--------FTM-GEYVKQ----YETQFAKTFGSKY-----AVMVSSGSTANLLMIAALF 70 (390)
T ss_dssp CCCCCCHHHHHHHHHHHHHTC--------CSS-CHHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC--------CCC-ChHHHH----HHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHH
Confidence 566789999999988775421 122 233334 4556888999874 477899999999999998
Q ss_pred ------ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 018300 189 ------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (358)
Q Consensus 189 ------l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~ 262 (358)
+++||+|+++.+.|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|++.. ..
T Consensus 71 ~~~~~~~~~g~~Vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~ 138 (390)
T 3b8x_A 71 FTKKPRLKKGDEIIVPAVSWSTTYY--------PLQQYGL--RVKFVDIDINTLNIDIESLKEAVTD-STKAILTVN-LL 138 (390)
T ss_dssp SSSSCSCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEEC-GG
T ss_pred hhhhcCCCCcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCccccCcCHHHHHHHhCc-CCeEEEEEC-Cc
Confidence 8899999999887665432 2334565 5556667766688999999998864 678887742 34
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcC--cCcCccCcEEEEEEeCCCCchhHHHHH
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTT--HKSLRGPRGGMIFFKKDPVLGVELESA 339 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~--hK~L~Gp~GG~I~~~~~~~~~~~~~~~ 339 (358)
+...|+++|.++|+++|+++++|++|+.|....+. .+. ..|+.++|. .|.+.++.||+++++++ ++.++
T Consensus 139 g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~-----~l~~~ 210 (390)
T 3b8x_A 139 GNPNNFDEINKIIGGRDIILLEDNCESMGATFNNK---CAGTFGLMGTFSSFYSNHIATMEGGCIVTDDE-----EIYHI 210 (390)
T ss_dssp GCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHH
T ss_pred cChhhHHHHHHHHHHcCCEEEEECcCcccCEECCc---ccccccceEEEEccCCCCCccCCceEEEeCCH-----HHHHH
Confidence 55689999999999999999999999988664221 122 246666553 34477778999999875 56665
Q ss_pred Hhhc
Q 018300 340 INNA 343 (358)
Q Consensus 340 i~~~ 343 (358)
+...
T Consensus 211 ~~~~ 214 (390)
T 3b8x_A 211 LLCI 214 (390)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 61
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.76 E-value=5.1e-18 Score=163.47 Aligned_cols=199 Identities=12% Similarity=0.083 Sum_probs=141.9
Q ss_pred cccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHH
Q 018300 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (358)
Q Consensus 106 ~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~ 185 (358)
++-.+.+...+ +++++...+.... |+ ..+...+ .++.+++++|.+. .+++.||+.|+..++
T Consensus 10 ~l~~~~~~~~~-~~~~~~~~~~~~~--------~~-~~~~~~~----l~~~la~~~~~~~-----~~~~~~gt~a~~~~~ 70 (374)
T 3uwc_A 10 YLERQFADIEP-YLNDLREFIKTAD--------FT-LGAELEK----FEKRFAALHNAPH-----AIGVGTGTDALAMSF 70 (374)
T ss_dssp CHHHHTSSCHH-HHHHHHHHHHHTC--------CS-SCHHHHH----HHHHHHHHTTCSE-----EEEESCHHHHHHHHH
T ss_pred ccccCCCCchH-HHHHHHHHHHcCC--------cc-cChhHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHHHHH
Confidence 33344445555 8888877665321 22 2233333 4556889999874 467889999999999
Q ss_pred HHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC
Q 018300 186 TAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (358)
Q Consensus 186 ~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~ 264 (358)
.++ ++|||+|+++++.|.++.. .+...|. ++..++++ +++.+|++++++.+++ ++++|+.+ +.+|.
T Consensus 71 ~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~~~-n~~G~ 137 (374)
T 3uwc_A 71 KMLNIGAGDEVITCANTFIASVG--------AIVQAGA--TPVLVDSE-NGYVIDPEKIEAAITD-KTKAIMPV-HYTGN 137 (374)
T ss_dssp HHTTCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBC-TTSSBCGGGTGGGCCT-TEEEECCB-CGGGC
T ss_pred HHcCCCCCCEEEECCCccHHHHH--------HHHHcCC--EEEEEecC-CCCCcCHHHHHHhCCC-CceEEEEe-CCcCC
Confidence 999 9999999999886655421 2345565 44555565 5678999999998865 67877732 23567
Q ss_pred CCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCc--CcCcc-CcEEEEEEeCCCCchhHHHHHH
Q 018300 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELESAI 340 (358)
Q Consensus 265 ~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~h--K~L~G-p~GG~I~~~~~~~~~~~~~~~i 340 (358)
..|+++|.++|+++|+++++|++|+.|....+ .++. .+|++++|+| |+|++ +.||+++++++ ++.+++
T Consensus 138 ~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~---~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~-----~~~~~~ 209 (374)
T 3uwc_A 138 IADMPALAKIAKKHNLHIVEDACQTILGRIND---KFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSD-----EYAEKL 209 (374)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTCTTCEETT---EETTSSSSEEEEECSSSSSSCCSSCCEEEEESCH-----HHHHHH
T ss_pred cCCHHHHHHHHHHcCCEEEEeCCCccCceeCC---eeccccccEEEEeCCCCCcCCccceeEEEEeCCH-----HHHHHH
Confidence 88999999999999999999999997755332 1222 4799999988 99987 56899998875 676666
Q ss_pred hhcc
Q 018300 341 NNAV 344 (358)
Q Consensus 341 ~~~~ 344 (358)
....
T Consensus 210 ~~~~ 213 (374)
T 3uwc_A 210 RLYR 213 (374)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6543
No 62
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.76 E-value=4e-17 Score=158.27 Aligned_cols=234 Identities=11% Similarity=0.081 Sum_probs=154.0
Q ss_pred ccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la 158 (358)
+++....+.++..+.+... ....+++...++ ..++.|++++...+... ..+|+.. .|. .++++.+.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g~---~~l~~~la~~l~ 81 (386)
T 1u08_A 10 SKLPQLGTTIFTQMSALAQ-QHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPM---TGV---QALREAIAQKTE 81 (386)
T ss_dssp CSCCCCCCCHHHHHHHHHH-HTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TCC---HHHHHHHHHHHH
T ss_pred hhhhcCCccHHHHHHHHHh-cCCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCCC---CCC---HHHHHHHHHHHH
Confidence 4455666666665544332 234566654433 36789999998877542 1234321 122 357777777777
Q ss_pred HHcCCC--CCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC
Q 018300 159 AAFNLD--ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (358)
Q Consensus 159 ~lfg~~--~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (358)
+.+|.+ ++ . ..+++.+|++|+..++.++++|||+|++.++.|.++.. .+...|. +++.++++++++
T Consensus 82 ~~~g~~~~~~-~-~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~ 149 (386)
T 1u08_A 82 RLYGYQPDAD-S-DITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGG--IVKRMALQPPHF 149 (386)
T ss_dssp HHHSCCCCTT-T-TEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECCTTTC
T ss_pred HHhCCCCCCC-C-CEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeecCcccC
Confidence 778854 32 0 12445566789999999999999999999887765421 2344565 444555654456
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCC---C--C-CC
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F--K-YC 305 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p---l--~-ga 305 (358)
.+|+++|++.+. .++++|++..+++ |...+ +++|.++|+++|+++++|++|... ...+....+ + . +.
T Consensus 150 ~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~ 227 (386)
T 1u08_A 150 RVDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHI-NFSQQGHASVLAHPQLRER 227 (386)
T ss_dssp CCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTC-BCCSSCCCCGGGSHHHHTT
T ss_pred cCCHHHHHHhhc-ccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEcccccc-ccCCCCCcChhcccCccCc
Confidence 799999999886 3788888765554 44554 789999999999999999998743 332321111 2 1 57
Q ss_pred cEEEEcCcCcCc--cCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 306 DVVTTTTHKSLR--GPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 306 Div~~S~hK~L~--Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|+++.|+||+++ |.|.|++++++ ++.+++..
T Consensus 228 ~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~ 260 (386)
T 1u08_A 228 AVAVSSFGKTYHMTGWKVGYCVAPA------PISAEIRK 260 (386)
T ss_dssp EEEEEEHHHHTTCGGGCCEEEECCH------HHHHHHHH
T ss_pred EEEEecchhhcCCcccceEEEEcCH------HHHHHHHH
Confidence 899999999984 55679999876 45555543
No 63
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.76 E-value=2e-17 Score=163.02 Aligned_cols=192 Identities=17% Similarity=0.218 Sum_probs=138.4
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD 193 (358)
.|+.+++++...+... .|+. ..+...++ ++.+++++|.+. .+++.+|++|+..++.++. +||
T Consensus 30 ~p~~~~~a~~~~~~~~---~y~~-----~~~~~~~l----~~~la~~~~~~~-----v~~~~ggt~al~~~l~~l~-~gd 91 (424)
T 2po3_A 30 DRARLYERLDRALDSQ---WLSN-----GGPLVREF----EERVAGLAGVRH-----AVATCNATAGLQLLAHAAG-LTG 91 (424)
T ss_dssp CHHHHHHHHHHHHHHT---CCSS-----SCHHHHHH----HHHHHHHHTSSE-----EEEESCHHHHHHHHHHHHT-CCS
T ss_pred ChHHHHHHHHHHHhcC---Cccc-----CCHHHHHH----HHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcC-CCC
Confidence 4668888887766432 1211 02333344 456888998853 3566788889999999874 899
Q ss_pred EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHH
Q 018300 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQ 273 (358)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ 273 (358)
+|+++++.|.++.. .+...|. +++.++++++++.+|+++|++.++. ++++|++.. .+|...|+++|.+
T Consensus 92 ~Vlv~~~~~~~~~~--------~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~tG~~~~l~~i~~ 159 (424)
T 2po3_A 92 EVIMPSMTFAATPH--------ALRWIGL--TPVFADIDPDTGNLDPDQVAAAVTP-RTSAVVGVH-LWGRPCAADQLRK 159 (424)
T ss_dssp EEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTSSBCHHHHGGGCCT-TEEEEEEEC-GGGCCCCHHHHHH
T ss_pred EEEECCCccHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhhCc-CCcEEEEEC-CCCCcCCHHHHHH
Confidence 99999987665432 2345565 4556667655678999999998864 688887753 4667789999999
Q ss_pred HHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCc--CcCccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 274 IADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 274 ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~h--K~L~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
+|+++|+++++|++|+.|+...+. ++. ..|++++|+| |+|+|+++|+++++++ ++.+++...
T Consensus 160 la~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~-----~l~~~l~~~ 224 (424)
T 2po3_A 160 VADEHGLRLYFDAAHALGCAVDGR---PAGSLGDAEVFSFHATKAVNAFEGGAVVTDDA-----DLAARIRAL 224 (424)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHHH
T ss_pred HHHHcCCEEEEECccccCCeECCe---ecccccCEEEEeCCCCCCccCCCCeEEEeCCH-----HHHHHHHHH
Confidence 999999999999999987764432 233 4689999987 9898889999999844 566666543
No 64
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.75 E-value=4.4e-17 Score=159.65 Aligned_cols=227 Identities=12% Similarity=0.073 Sum_probs=151.7
Q ss_pred cccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
++++..+++..+..+.+... ....+++..+++ ..++.+.+++...+.+. ..+|+.. .|. .++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g~---~~l~~~la~~~ 75 (411)
T 2o0r_A 4 VSRLRPYATTVFAEMSALAT-RIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPPG---PGS---APLRRAIAAQR 75 (411)
T ss_dssp CGGGGGGSSCHHHHHHHHHH-TTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TCC---HHHHHHHHHHH
T ss_pred hhHhHhcCccHHHHHHHHhh-cCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CCC---HHHHHHHHHHH
Confidence 45667777777776665433 234566654443 35789999998877542 2234321 122 35777777777
Q ss_pred HHHcCCC--CCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-
Q 018300 158 LAAFNLD--ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES- 234 (358)
Q Consensus 158 a~lfg~~--~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~- 234 (358)
.+.+|.+ +++. .+++++|++|+..++.++++|||+|++.++.|.++.. .+...|..+ +.++++++
T Consensus 76 ~~~~g~~~~~~~~--v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~--~~v~~~~~~ 143 (411)
T 2o0r_A 76 RRHFGVDYDPETE--VLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP--------VVAMAGAHR--VTVPLVPDG 143 (411)
T ss_dssp HHHHCCCCCTTTS--EEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEE--EEEECEEET
T ss_pred HHHcCCCCCCCce--EEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCEE--EEeeccccc
Confidence 7777854 3101 2444566789999999999999999999887766421 234556544 44444432
Q ss_pred -CCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCC---C---
Q 018300 235 -TGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F--- 302 (358)
Q Consensus 235 -~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p---l--- 302 (358)
++.+|+++|++.++. ++++|++..+++ |...+ +++|.++|+++|+++++|++|+.+. ..+..+.+ +
T Consensus 144 ~~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~ 221 (411)
T 2o0r_A 144 RGFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV-FDHARHLPLAGFDGM 221 (411)
T ss_dssp TEEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB-CTTCCCCCGGGSTTT
T ss_pred cCCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCCCCCcChhhccCC
Confidence 346999999998864 688887765554 45555 5899999999999999999997543 33321111 2
Q ss_pred CCCcEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 303 KYCDVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 303 ~gaDiv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
.+.|++++|+||++ +|.+.|++++++
T Consensus 222 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 249 (411)
T 2o0r_A 222 AERTITISSAAKMFNCTGWKIGWACGPA 249 (411)
T ss_dssp GGGEEEEEEHHHHTTCTTTCEEEEECCH
T ss_pred CCCEEEEeechhhcCCccceEEEEeeCH
Confidence 15689999999998 456789999876
No 65
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.75 E-value=2.5e-17 Score=159.13 Aligned_cols=232 Identities=13% Similarity=0.122 Sum_probs=148.2
Q ss_pred ccCh-HHHHHHHHHHHHh----hhcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 85 EADP-EVCEIITKEKERQ----FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 85 ~~d~-~~~~~i~~e~~~~----~~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
++++ +.|..+.+...+. ..-+++..+++. .++.|++++.+.+.+....+|+ ......++++.+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~l~~~ia~~~ 76 (376)
T 2dou_A 3 RVPEPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYC------LKSCTLPFLEEAARWY 76 (376)
T ss_dssp -CCCTHHHHHHHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCC------CHHHHHHHHHHHHHHH
T ss_pred cCCccchHHHHHHHHHHhhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCC------CCCCCHHHHHHHHHHH
Confidence 3445 6666665544433 234566555443 5799999998876542122232 2223456666666666
Q ss_pred HHHcCCCCCCCcceEEeC-CCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC
Q 018300 158 LAAFNLDENKWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (358)
Q Consensus 158 a~lfg~~~~~~~v~V~~~-SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (358)
.+.+|.+.+ ...+|.++ +|++|+..++.++++|||+|++.++.|.++.. .+...|.. ++.+++ +++.
T Consensus 77 ~~~~g~~~~-~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~--~~~~~~-~~~~ 144 (376)
T 2dou_A 77 EGRYGVGLD-PRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFG--------AARVASLR--TFLIPL-REDG 144 (376)
T ss_dssp HHHHSCCCC-TTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHTTCE--EEEECB-CTTS
T ss_pred HHHhCCCCC-CCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHH--------HHHHcCCE--EEEeeC-CCCC
Confidence 666698621 00024444 55679999999999999999999876655421 22345653 444445 3344
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C--CCc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCD 306 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~--gaD 306 (358)
.+|++++++.+.. ++++|++..+++ |...+ +++|.++|+++|+++++|++|+.+ ...+..+..+ + +.+
T Consensus 145 ~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~ 222 (376)
T 2dou_A 145 LADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQ-VYEGEAPSPLALPGAKERV 222 (376)
T ss_dssp SBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGG-BSSSCCCCGGGSTTGGGTE
T ss_pred CCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhc-ccCCCCCChhhcCCCCCcE
Confidence 6899999888753 688888865555 44555 678899999999999999999844 3222211222 2 456
Q ss_pred EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 307 iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+++.|+||++ +|.+.|++++++ ++.+++..
T Consensus 223 i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~ 254 (376)
T 2dou_A 223 VELFSLSKSYNLAGFRLGFALGSE------EALARLER 254 (376)
T ss_dssp EEEEEHHHHHTCGGGCCEEEEECH------HHHHHHHH
T ss_pred EEEecchhhcCChhheeEEEecCH------HHHHHHHH
Confidence 8899999997 566789999876 45555543
No 66
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.75 E-value=2.9e-17 Score=159.86 Aligned_cols=207 Identities=17% Similarity=0.239 Sum_probs=142.4
Q ss_pred cccccccCC--C-CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 104 SLELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 104 ~i~lias~n--~-~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
-+++...++ + .++.+++++...+.. +..++.+.++..|.. ++.+.+++++++++|.+. .+++++|++|
T Consensus 45 ~idl~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~---~~~~~l~~~la~~~g~~~-----v~~~~ggt~a 115 (398)
T 3a2b_A 45 VLMFGSNSYLGLTTDTRIIKAAQDALEK-YGTGCAGSRFLNGTL---DIHVELEEKLSAYVGKEA-----AILFSTGFQS 115 (398)
T ss_dssp EEECSCSCTTCGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCC---HHHHHHHHHHHHHHTCSE-----EEEESSHHHH
T ss_pred EEEeecccccCCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECCHHHH
Confidence 345544433 2 788999999887754 223333322333432 344446777899999853 3667788899
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc---CCeEEEE
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLIIA 257 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~---~~klIi~ 257 (358)
+..++.++++|||+|++.++.|+++.. .+...|.. ++.++. +|++++++.++.. ++++|++
T Consensus 116 ~~~~~~~~~~~gd~V~~~~p~~~~~~~--------~~~~~g~~--~~~v~~------~d~~~l~~~l~~~~~~~~~~v~~ 179 (398)
T 3a2b_A 116 NLGPLSCLMGRNDYILLDERDHASIID--------GSRLSFSK--VIKYGH------NNMEDLRAKLSRLPEDSAKLICT 179 (398)
T ss_dssp HHHHHHHSSCTTCEEEEETTCCHHHHH--------HHHHSSSE--EEEECT------TCHHHHHHHHHTSCSSSCEEEEE
T ss_pred HHHHHHHHhCCCCEEEECCccCHHHHH--------HHHHcCCc--eEEeCC------CCHHHHHHHHHhhccCCceEEEE
Confidence 999999999999999999987765432 23455653 444332 6899999988754 6888888
Q ss_pred cCCCC--CCCCCHHHHHHHHHHcCCEEEEecccccccccc-CCcc-C--CCC-CCcEEEEcCcCcCccCcEEEEEEeCCC
Q 018300 258 GASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVVA-D--PFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP 330 (358)
Q Consensus 258 ~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~~~-~--pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~ 330 (358)
..+++ |...++++|.++|+++|+++++|++|+.|.... +... . .+. ++|++++|+||+++ |.||++++++
T Consensus 180 ~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~-- 256 (398)
T 3a2b_A 180 DGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA-- 256 (398)
T ss_dssp ESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH--
T ss_pred eCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH--
Confidence 76654 567899999999999999999999998664311 1100 0 111 36999999999885 6679999876
Q ss_pred CchhHHHHHHhh
Q 018300 331 VLGVELESAINN 342 (358)
Q Consensus 331 ~~~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 257 ----~~~~~l~~ 264 (398)
T 3a2b_A 257 ----DVIDFLKH 264 (398)
T ss_dssp ----HHHHHHHH
T ss_pred ----HHHHHHHH
Confidence 55555544
No 67
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.75 E-value=1.4e-17 Score=160.95 Aligned_cols=211 Identities=15% Similarity=0.094 Sum_probs=143.0
Q ss_pred cccccccC--CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCCHH
Q 018300 104 SLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGSP 179 (358)
Q Consensus 104 ~i~lias~--n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~~SGt~ 179 (358)
-+++..++ -..++.|++++...+.+. ..+|+. . ..++++.+++++++.+| ++++ ..+++++|++
T Consensus 29 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~l~~~la~~l~~~~g~~~~~~---~i~~~~g~~~ 96 (391)
T 3dzz_A 29 ELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYES-----V---PAEYYKAVADWEEIEHRARPKED---WCVFASGVVP 96 (391)
T ss_dssp CEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBC-----C---CHHHHHHHHHHHHHHHSCCCCGG---GEEEESCHHH
T ss_pred ceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCC-----C---CHHHHHHHHHHHHHHhCCCCCHH---HEEECCCHHH
Confidence 34444333 346899999998876542 223332 1 24677778888999998 4443 2244445578
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec--CCCCCCCHHHHHHHhhhcCCeEEEE
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLVDYDMLEKTAILFRPKLIIA 257 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~iD~d~le~~i~~~~~klIi~ 257 (358)
|+..++.++++|||+|++.++.|.++.. .+...|. +++.++++ ..+..+|+++|++.++..++++|++
T Consensus 97 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i 166 (391)
T 3dzz_A 97 AISAMVRQFTSPGDQILVQEPVYNMFYS--------VIEGNGR--RVISSDLIYENSKYSVNWADLEEKLATPSVRMMVF 166 (391)
T ss_dssp HHHHHHHHHSCTTCEEEECSSCCHHHHH--------HHHHTTC--EEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHhCCCCCeEEECCCCcHHHHH--------HHHHcCC--EEEEeeeeecCCceeecHHHHHHHHhccCceEEEE
Confidence 9999999999999999999886655321 2344565 44555553 2223499999999987557898877
Q ss_pred cCCCCC--CC---CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-----CCc--EEEEcCcCcC--ccCcEEE
Q 018300 258 GASAYP--RD---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD--VVTTTTHKSL--RGPRGGM 323 (358)
Q Consensus 258 ~~s~~~--~~---~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-----gaD--iv~~S~hK~L--~Gp~GG~ 323 (358)
..++++ .. .++++|.++|+++|+++++|++|+.+ ...+..+.++. ..| ++++|+||++ +|.+.|+
T Consensus 167 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~ 245 (391)
T 3dzz_A 167 CNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDL-VLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAAC 245 (391)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTC-BCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEE
T ss_pred ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccc-cCCCCCceehhhcCccccCcEEEEEeChhhccccchhheE
Confidence 665544 44 46899999999999999999998743 33332222221 256 8899999996 6677899
Q ss_pred EEEeCCCCchhHHHHHHhh
Q 018300 324 IFFKKDPVLGVELESAINN 342 (358)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~ 342 (358)
++++++ ++.+++..
T Consensus 246 ~~~~~~-----~~~~~~~~ 259 (391)
T 3dzz_A 246 AIIPNP-----DLRARAEE 259 (391)
T ss_dssp EECCSH-----HHHHHHHH
T ss_pred EEECCH-----HHHHHHHH
Confidence 998744 56666544
No 68
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.75 E-value=2e-17 Score=160.87 Aligned_cols=198 Identities=14% Similarity=0.074 Sum_probs=134.7
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.+++.|++++...+.+....+|+. ..|.. ++++.+++++++++|.+.+.....+++++|++|+..++.+++++|
T Consensus 53 ~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~---~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g 126 (407)
T 3nra_A 53 EPTPGAFDLFSAGVQSGGVQAYTE---YRGDL---GIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARG 126 (407)
T ss_dssp CCCTTHHHHHHHHHHHTHHHHSCC---TTCCH---HHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTT
T ss_pred CCcHHHHHHHHHHHhcCCCCCcCC---CCCCH---HHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCC
Confidence 467889998887765432222322 11322 466667788899999852100013455566789999999999999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceec-----CCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-----ESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRD 265 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~ 265 (358)
|+|++.++.|.++.. .+...|..+ ++++++ ++++.+|++++++.+.. ++++|++..+++ |..
T Consensus 127 d~vl~~~~~~~~~~~--------~~~~~g~~~--~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~ 195 (407)
T 3nra_A 127 DKVAIVQPDYFANRK--------LVEFFEGEM--VPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFLFSNPNNPAGVV 195 (407)
T ss_dssp CEEEEEESCCTHHHH--------HHHHTTCEE--EEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEESSCTTTCCC
T ss_pred CEEEEcCCcccchHH--------HHHHcCCEE--EEeecccccccCcCCCcCHHHHHHHHhh-CCcEEEEcCCCCCCCcc
Confidence 999998876655421 234556544 444452 24568999999999875 788877755554 456
Q ss_pred CC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-------CCcEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 266 FD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 266 ~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-------gaDiv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
.+ +++|+++|+++|+++++|++|+.+.. .+....++. +.++++.|+||++ .|.+.|++++++
T Consensus 196 ~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 269 (407)
T 3nra_A 196 YSAEEIGQIAALAARYGATVIADQLYSRLRY-AGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR 269 (407)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTSBC-TTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEcccccccc-CCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH
Confidence 67 89999999999999999999985433 332111211 3568899999997 466779999876
No 69
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.75 E-value=5.8e-17 Score=161.45 Aligned_cols=199 Identities=9% Similarity=0.015 Sum_probs=138.7
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCC--CcceEEeCCCHHHHHHHHHHhc
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK--WGVNVQPLSGSPANFEVYTAIL 189 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~--~~v~V~~~SGt~A~~~a~~all 189 (358)
.+.++.+.+++.+.+.... .+ +...+...++|+.+++++++++|++.+. ....+++.+||+|+..++.++.
T Consensus 52 ~~~~~~v~e~~~~a~~~~~-~~------~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~ 124 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINKNW-ID------KEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMK 124 (452)
T ss_dssp CCCCHHHHHHHHHTTTCBT-TC------TTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhccCC-CC------hhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHH
Confidence 4567889999887664321 11 1122445678888999999999998642 1113556778889999988875
Q ss_pred c--------CC-----CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEE
Q 018300 190 K--------PH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (358)
Q Consensus 190 ~--------pG-----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi 256 (358)
+ +| |+|++++ .|. ++. +.+...|. +++.++++++++.+|+++|++.+++ ++++|+
T Consensus 125 ~~~~~~~~~~G~~~~~~~vi~~~-~h~---~~~-----~~~~~~G~--~v~~v~~~~~~~~~d~~~l~~~i~~-~t~~v~ 192 (452)
T 2dgk_A 125 WRWRKRMEAAGKPTDKPNLVCGP-VQI---CWH-----KFARYWDV--ELREIPMRPGQLFMDPKRMIEACDE-NTIGVV 192 (452)
T ss_dssp HHHHHHHHHTTCCCSCCEEEESS-CCH---HHH-----HHHHHTTC--EEEECCCBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHHhcCCCCCCcEEEECC-CcH---HHH-----HHHHHcCc--eEEEEecCCCCCeECHHHHHHHHhh-CCEEEE
Confidence 4 66 5888876 443 221 23345676 4556666644679999999999865 678887
Q ss_pred EcCCC--CCCCCCHHHHHHHHHHc------CCEEEEecccccccc--ccCCccCC--CCCCcEEEEcCcCcCccC-cEEE
Q 018300 257 AGASA--YPRDFDYPRMRQIADAV------GALLMMDMAHISGLV--AASVVADP--FKYCDVVTTTTHKSLRGP-RGGM 323 (358)
Q Consensus 257 ~~~s~--~~~~~dl~~I~~ia~e~------g~~livD~Ah~~Gl~--~~g~~~~p--l~gaDiv~~S~hK~L~Gp-~GG~ 323 (358)
+..++ +|...|+++|.++|+++ |+++++|+||+.+.. ..+..+.. +.++|++++++||++.+| +.|+
T Consensus 193 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~ 272 (452)
T 2dgk_A 193 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGW 272 (452)
T ss_dssp CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEE
Confidence 76554 46788999999999996 999999999886543 12211122 238999999999998555 5599
Q ss_pred EEEeCC
Q 018300 324 IFFKKD 329 (358)
Q Consensus 324 I~~~~~ 329 (358)
++++++
T Consensus 273 ~~~~~~ 278 (452)
T 2dgk_A 273 VIWRDE 278 (452)
T ss_dssp EEESSG
T ss_pred EEEcCH
Confidence 999764
No 70
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.75 E-value=2e-17 Score=163.99 Aligned_cols=168 Identities=20% Similarity=0.242 Sum_probs=124.7
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.+.|| +++..+++| +++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|+++.....
T Consensus 72 ~~~y~r~--~~p~~~~l~----~~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~-- 138 (414)
T 3ndn_A 72 HYVYSRY--GNPTVSVFE----ERLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCS-- 138 (414)
T ss_dssp CCCBTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHH--
T ss_pred CcCcCCC--CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHH--
Confidence 4444444 456555554 45888999764 3778899999999999999999999999987776432100
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
......|. ++.+++.+ |++++++.++. ++|+|++..+++ |...|+++|.++|+++|++|++|++|+.
T Consensus 139 --~~~~~~g~--~~~~v~~~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~ 207 (414)
T 3ndn_A 139 --EILPRWGV--QTVFVDGD------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFAT 207 (414)
T ss_dssp --THHHHTTC--EEEEECTT------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTH
T ss_pred --HHHHHcCc--EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcc
Confidence 01122455 44443332 89999998864 789998876655 4688999999999999999999999986
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCcc---CcEEEEEEeCC
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKD 329 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~G---p~GG~I~~~~~ 329 (358)
|.. ..++. ++|+++.|++|+|+| +++|+++++++
T Consensus 208 ~~~-----~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~ 245 (414)
T 3ndn_A 208 PLL-----QQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDRE 245 (414)
T ss_dssp HHH-----CCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred ccc-----CCchhcCCCeEeccCCccccCCCCceEEEEEECHH
Confidence 643 24556 899999999999976 45899999875
No 71
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.74 E-value=2.8e-17 Score=159.06 Aligned_cols=221 Identities=16% Similarity=0.124 Sum_probs=146.5
Q ss_pred cccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~l 157 (358)
+++++.+.+..+..+.+.... ...+++..+++ ..++.+.+++...+.. ...|+.. .|. .+ .++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~---~~~---~~----l~~~l 70 (381)
T 1v2d_A 4 HPRTEAAKESIFPRMSGLAQR-LGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPP---AGL---PA----LREAL 70 (381)
T ss_dssp CGGGGGC---CHHHHHHHHHH-HTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCT---TCC---HH----HHHHH
T ss_pred hhhhhhcCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCC---CCC---HH----HHHHH
Confidence 455666666666655554332 34566654444 3578999999887654 2233321 122 23 34557
Q ss_pred HHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec--CCC
Q 018300 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--EST 235 (358)
Q Consensus 158 a~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~--~~~ 235 (358)
++++++++++ .+++.+|++|+..++.++++|||+|++.++.|.++.. .+...|.. ++.++.+ +++
T Consensus 71 a~~~~~~~~~---v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~--~~~v~~~~~~~~ 137 (381)
T 1v2d_A 71 AEEFAVEPES---VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGAK--ARLVRLDLTPEG 137 (381)
T ss_dssp HHHHTSCGGG---EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCE--EEEEECEEETTE
T ss_pred HHhcCCChhh---EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCE--EEEEeCCCCCcc
Confidence 8889987642 3455667789999999999999999999887765421 23445654 4444454 344
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC----CCCc
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KYCD 306 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl----~gaD 306 (358)
+.+|+++|++.+.. ++++|++..+++ |...+ +++|.++|+++|+++++|++|+.+.. |..+.++ .+.|
T Consensus 138 ~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--g~~~~~~~~~~~~~~ 214 (381)
T 1v2d_A 138 FRLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY--GERPRRLREFAPERT 214 (381)
T ss_dssp EECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS--SSCCCCHHHHCTTTE
T ss_pred CCcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc--CCCCCCHHHhcCCCE
Confidence 67999999998753 688888765554 44554 89999999999999999999874432 2211111 2689
Q ss_pred EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 307 VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 307 iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
++++|+||++ +|.+.|+++++++
T Consensus 215 ~~~~s~sK~~~~~G~r~G~~~~~~~ 239 (381)
T 1v2d_A 215 FTVGSAGKRLEATGYRVGWIVGPKE 239 (381)
T ss_dssp EEEEEHHHHTTCGGGCCEEEECCTT
T ss_pred EEEeechhhcCCcccceEEEEeCHH
Confidence 9999999987 4667899999775
No 72
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.74 E-value=1.9e-16 Score=153.94 Aligned_cols=208 Identities=13% Similarity=0.121 Sum_probs=141.3
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhccc---CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeC
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPL 175 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~---~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~ 175 (358)
+-+++...+. .+++.|.+++...+.... ..+|+. ..|. .++++.+.+++.+.+|. +++ ..++++
T Consensus 36 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~---~~g~---~~lr~~la~~l~~~~g~~~~~~---~i~~~~ 106 (398)
T 3ele_A 36 NVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTS---AQGD---VETRAAIAEFLNNTHGTHFNAD---NLYMTM 106 (398)
T ss_dssp GCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCC---TTCC---HHHHHHHHHHHHHHHCCCCCGG---GEEEES
T ss_pred CeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCC---CCCc---HHHHHHHHHHHHHHhCCCCChH---HEEEcc
Confidence 3455543332 367899999988775421 123332 1232 25667677778888885 333 224444
Q ss_pred CCHHHHHHHHHHhccCC-CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeE
Q 018300 176 SGSPANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (358)
Q Consensus 176 SGt~A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~kl 254 (358)
+|++|+..++.++++|| |+|++.++.|.++.. .+...|. +++++++++++..+|+++|++.+.. ++++
T Consensus 107 g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~ 175 (398)
T 3ele_A 107 GAAASLSICFRALTSDAYDEFITIAPYFPEYKV--------FVNAAGA--RLVEVPADTEHFQIDFDALEERINA-HTRG 175 (398)
T ss_dssp SHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEECCCTTTSSCCHHHHHHTCCT-TEEE
T ss_pred CHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCCcCCcCCHHHHHHHhCc-CCCE
Confidence 55779999999999999 999999886655421 2344565 4555556655568999999998864 7888
Q ss_pred EEEcCCCCC--CCCC---HHHHHHHHHH------cCCEEEEeccccccccccC-CccCCCC--CCcEEEEcCcCcC--cc
Q 018300 255 IIAGASAYP--RDFD---YPRMRQIADA------VGALLMMDMAHISGLVAAS-VVADPFK--YCDVVTTTTHKSL--RG 318 (358)
Q Consensus 255 Ii~~~s~~~--~~~d---l~~I~~ia~e------~g~~livD~Ah~~Gl~~~g-~~~~pl~--gaDiv~~S~hK~L--~G 318 (358)
|++..+++| ...+ +++|+++|++ +|+++++|++|.. +...+ ..+...+ +.++++.|+||++ +|
T Consensus 176 v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 254 (398)
T 3ele_A 176 VIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYRE-IVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPG 254 (398)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTT-CBCTTCCCCCGGGTCSSEEEEEESTTTSSCTT
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccc-cccCCCCcCChHhhcCCeEEEEehhhcCCCcc
Confidence 888665554 4666 6777799999 9999999999874 33333 2222222 4568899999997 56
Q ss_pred CcEEEEEEeCCCC
Q 018300 319 PRGGMIFFKKDPV 331 (358)
Q Consensus 319 p~GG~I~~~~~~~ 331 (358)
.|.|+++++++.+
T Consensus 255 ~r~G~~~~~~~~~ 267 (398)
T 3ele_A 255 ERIGYVLVPDEVY 267 (398)
T ss_dssp TCCEEEECCTTST
T ss_pred ceeEEEEEcchhh
Confidence 7789999988643
No 73
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.74 E-value=2.3e-17 Score=161.88 Aligned_cols=169 Identities=22% Similarity=0.249 Sum_probs=125.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++..+++ ++++++++|.+. .++++||++|+..++.+++++||+|++.++.|++..... .......|
T Consensus 64 ~~~~~~~l----~~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~----~~~~~~~g 130 (392)
T 3qhx_A 64 GNPTRTAL----EAALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLI----DKVFTGWN 130 (392)
T ss_dssp CCHHHHHH----HHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH----HHTGGGGT
T ss_pred CChHHHHH----HHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHH----HHHHHhcC
Confidence 44544444 456889999874 477889999999999999999999999998876643210 01112345
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
. ++..++.+ |++++++.+++ ++++|++..+++ |...|+++|.++|+++|+++++|++|+.+.. .
T Consensus 131 ~--~~~~v~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~-----~ 196 (392)
T 3qhx_A 131 V--EYTPVALA------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL-----Q 196 (392)
T ss_dssp C--EEEEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-----C
T ss_pred c--EEEEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 4 44443332 89999998864 789988876654 5688999999999999999999999975532 2
Q ss_pred CCCC-CCcEEEEcCcCcCccC---cEEEEEEeCCCCchhHHHHHHhh
Q 018300 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 300 ~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.+++ ++|+++.|+||+++|+ ++|+++++++ ++.+++..
T Consensus 197 ~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~-----~~~~~l~~ 238 (392)
T 3qhx_A 197 QPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDE-----ELDQSFAF 238 (392)
T ss_dssp CGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHH
T ss_pred ChHHhCCcEEEEcCccccCCCCCceEEEEEECcH-----HHHHHHHH
Confidence 4555 8999999999999764 5899999864 55555544
No 74
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.74 E-value=7.7e-17 Score=154.07 Aligned_cols=209 Identities=10% Similarity=0.028 Sum_probs=144.7
Q ss_pred hcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 103 ~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
..++|..+++. +++.|++++...+... .+||. .. .+ ..++++++++|+++++ .+++++|++|
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~---~~-~l~~~la~~~~~~~~~---i~~~~g~~~a 80 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARDAVVKA--NRYAK-------NE---IL-MLGNKLAAHHQVEAPS---ILLTAGSSEG 80 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHHTGGGT--TSCCH-------HH---HH-HHHHHHHHHTTSCGGG---EEEESHHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHhhC--cCCCC-------Cc---hH-HHHHHHHHHhCCChHH---EEEeCChHHH
Confidence 34555545453 6899999998776532 23321 22 22 3566789999987642 3445566789
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh-cCCeEEEEcC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGA 259 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~-~~~klIi~~~ 259 (358)
+..++.++++|||+|++.++.|.++.. .+...|. ++++++.++ ++.+|++++++.++. .++++|++..
T Consensus 81 ~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~~v~l~~ 149 (354)
T 3ly1_A 81 IRAAIEAYASLEAQLVIPELTYGDGEH--------FAKIAGM--KVTKVKMLD-NWAFDIEGLKAAVAAYSGPSIVYLVN 149 (354)
T ss_dssp HHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECCCT-TSCCCHHHHHHHHHTCSSCEEEEEES
T ss_pred HHHHHHHHhCCCCeEEECCCCchHHHH--------HHHHcCC--EEEEecCCC-CCCCCHHHHHHHhccCCCCCEEEEeC
Confidence 999999999999999999876665421 2344565 445555653 478999999999874 4789888765
Q ss_pred CCC--CCCCCHHHHHHHHHH--cCCEEEEeccccccccccCCccCCCC------CCcEEEEcCcCcC--ccCcEEEEEEe
Q 018300 260 SAY--PRDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK------YCDVVTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 260 s~~--~~~~dl~~I~~ia~e--~g~~livD~Ah~~Gl~~~g~~~~pl~------gaDiv~~S~hK~L--~Gp~GG~I~~~ 327 (358)
+++ |...+.+++.++++. +|+++++|++|. ++...+..+..+. +.+++++|+||++ +|.+.|+++++
T Consensus 150 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 228 (354)
T 3ly1_A 150 PNNPTGTITPADVIEPWIASKPANTMFIVDEAYA-EFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH 228 (354)
T ss_dssp SCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTG-GGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHH-HhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC
Confidence 554 567888888888887 999999999988 4443332222221 3458899999997 46677999986
Q ss_pred CCCCchhHHHHHHhhccC
Q 018300 328 KDPVLGVELESAINNAVF 345 (358)
Q Consensus 328 ~~~~~~~~~~~~i~~~~f 345 (358)
+ ++.+++.....
T Consensus 229 ~------~~~~~~~~~~~ 240 (354)
T 3ly1_A 229 P------TVIALMGRYVA 240 (354)
T ss_dssp H------HHHHHHGGGTT
T ss_pred H------HHHHHHHHhcC
Confidence 6 67777766543
No 75
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.74 E-value=9.4e-17 Score=163.22 Aligned_cols=178 Identities=15% Similarity=0.101 Sum_probs=128.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc--------------CCCEEEecCCCCCcccc
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------------PHDRIMGLDLPHGGHLS 207 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--------------pGD~Vl~~~~~~ggh~s 207 (358)
..+...++|+.+.+|+++++|.+... ...+++.+||.||..++.++.. |+++|++++..|.+..
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~~-~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~- 206 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSKD-GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK- 206 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSS-CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHH-
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCC-CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHH-
Confidence 34566789999999999999998421 1245667888999988877643 5788998876544321
Q ss_pred cccccchhccccCCceE-EEEeceecCCCCCCCHHHHHHHhhhcC-----CeEEEEcCCC--CCCCCCHHHHHHHHHHcC
Q 018300 208 HGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASA--YPRDFDYPRMRQIADAVG 279 (358)
Q Consensus 208 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~iD~d~le~~i~~~~-----~klIi~~~s~--~~~~~dl~~I~~ia~e~g 279 (358)
+.+...|... ++..++++ +++.+|+++|++.+++.+ |++|++...+ +|...|+++|.++|+++|
T Consensus 207 -------~~~~~~g~g~~~~~~v~~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~ 278 (511)
T 3vp6_A 207 -------KAGAALGFGTDNVILIKCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYN 278 (511)
T ss_dssp -------HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHT
T ss_pred -------HHHHHcCCCCCcEEEeecC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcC
Confidence 2334555411 23344455 357999999999986532 7777765433 577889999999999999
Q ss_pred CEEEEeccccccccccCCccCCC---CCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 280 ALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 280 ~~livD~Ah~~Gl~~~g~~~~pl---~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+++++|++|+.|..........+ .++|++++++||||.+|.| |+++.+++
T Consensus 279 ~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~ 332 (511)
T 3vp6_A 279 LWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 332 (511)
T ss_dssp CEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred CEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH
Confidence 99999999998776433222222 2679999999999988866 78888775
No 76
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.74 E-value=7.9e-17 Score=158.50 Aligned_cols=236 Identities=11% Similarity=0.035 Sum_probs=154.5
Q ss_pred cccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcc--cCCCCCCCcCCCCcHHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQK 155 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~--~~~G~pg~r~~~G~~~~~~lE~~~~~ 155 (358)
++++...++.++..+.+... ...-+++..+++ ..++.|++++...+... ...+|+. ..|. .++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~---~~g~---~~l~~~la~ 88 (429)
T 1yiz_A 16 PKRYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTR---GFGH---PRLVQALSK 88 (429)
T ss_dssp SSSCCCCTTCHHHHHHHHHH-HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCC---SSCC---HHHHHHHHH
T ss_pred hHHhhhCCchHHHHHHHHhc-cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCC---CCCc---HHHHHHHHH
Confidence 45666677777776655433 334566654433 35799999998876542 1123332 1122 356666777
Q ss_pred HHHHHcCCC--CCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC
Q 018300 156 RALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (358)
Q Consensus 156 ~la~lfg~~--~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (358)
++.+.+|.+ ++ . ..+++.+|++|+..++.++++|||+|++.++.|.++.. .+...|.. ++.+++++
T Consensus 89 ~l~~~~g~~~~~~-~-~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~--~~~~~~~~ 156 (429)
T 1yiz_A 89 LYSQLVDRTINPM-T-EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP--------MVKAAGGI--PRFIPLKP 156 (429)
T ss_dssp HHHHHHTSCCCTT-T-SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCE--EEEEECBC
T ss_pred HHHHHhCCCCCCc-C-CEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCE--EEEEeCCc
Confidence 777777853 32 0 12444556789999999999999999999876665421 23345653 44455554
Q ss_pred C---------CCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCC---CHHHHHHHHHHcCCEEEEeccccccccccCC-c
Q 018300 234 S---------TGLVDYDMLEKTAILFRPKLIIAGASAY--PRDF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-V 298 (358)
Q Consensus 234 ~---------~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~ 298 (358)
+ ++.+|+++|++.++ .++++|++..+++ |... ++++|.++|+++|+++++|++|+. +...+. .
T Consensus 157 ~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~ 234 (429)
T 1yiz_A 157 NKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEH-MVFEPFEH 234 (429)
T ss_dssp CCSSSSEEGGGCBCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTSCC
T ss_pred ccccccccccCcccCHHHHHHHhc-cCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccc-cccCCCCC
Confidence 3 34689999999886 3788887765554 4455 489999999999999999999873 333221 1
Q ss_pred c--CCC--C-CCcEEEEcCcCcCc--cCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 299 A--DPF--K-YCDVVTTTTHKSLR--GPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 299 ~--~pl--~-gaDiv~~S~hK~L~--Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+ ..+ . +.|+++.|+||+++ |.|.|++++++ ++.+.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~ 279 (429)
T 1yiz_A 235 IRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE------ALLKNLQM 279 (429)
T ss_dssp CCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH------HHHHHHHH
T ss_pred cChhhccCCcCceEEEecchhccCCCCcceEEEEeCH------HHHHHHHH
Confidence 1 112 1 57899999999874 55679999876 55555544
No 77
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.74 E-value=8.5e-18 Score=162.18 Aligned_cols=200 Identities=16% Similarity=0.137 Sum_probs=137.7
Q ss_pred CCCCcHHHHHHHhhhhhcccCCCCCCC-cCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-
Q 018300 111 ENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (358)
Q Consensus 111 ~n~~s~~V~~al~~~l~~~~~~G~pg~-r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al- 188 (358)
....++.|++++.+.+.+... ..++. +.|. ... .....+++.+++++|++.+ ..+++.+|+.|+..++.++
T Consensus 25 ~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~y~--~~~-~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~~~ 97 (390)
T 1elu_A 25 QGILPTVALEAITAMYGYLQE-NGPFSIAANQ--HIQ-QLIAQLRQALAETFNVDPN---TITITDNVTTGCDIVLWGLD 97 (390)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH-HCSSSHHHHH--HHH-HHHHHHHHHHHHHTTSCGG---GEEEESSHHHHHHHHHHHSC
T ss_pred cCCCCHHHHHHHHHHHHHHhc-cCCcchhhHH--HHH-HHHHHHHHHHHHHcCCCHH---HEEEeCChHHHHHHHHhCCC
Confidence 445678899999887654321 11110 0111 111 2233467789999998764 2355567788999999999
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-CCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCC
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAY--PRD 265 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~ 265 (358)
++|||+|+++++.|.++... +. ......|. +++.+++++ +++.+|++++++.++. ++++|++..+++ |..
T Consensus 98 ~~~gd~vl~~~~~~~~~~~~-~~---~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~ 170 (390)
T 1elu_A 98 WHQGDEILLTDCEHPGIIAI-VQ---AIAARFGI--TYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILSHLLWNTGQV 170 (390)
T ss_dssp CCTTCEEEEETTCCHHHHHH-HH---HHHHHHCC--EEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEESBCTTTCCB
T ss_pred CCCCCEEEEecCcccHHHHH-HH---HHHHHhCc--EEEEEcCCCCCCccchHHHHHHhcCC-CceEEEEeccccCCcee
Confidence 89999999998876654211 00 01123455 344444542 3567999999998864 688888866554 568
Q ss_pred CCHHHHHHHHH----HcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 266 FDYPRMRQIAD----AVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 266 ~dl~~I~~ia~----e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.|+++|.++|+ ++|+++++|++|+.|.. +..++ +.|++++|+||++.||.| |+++++++
T Consensus 171 ~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~ 236 (390)
T 1elu_A 171 LPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSL-----PLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGD 236 (390)
T ss_dssp CCHHHHHHHHHHCCSSSCCEEEEECTTTBTTB-----CCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTT
T ss_pred cCHHHHHHHHhhhhhhcCcEEEEEcccccCCc-----CCChhhcCCCEEEccccccccCCCceEEEEECHH
Confidence 89999999999 99999999999986643 22233 689999999998877766 99999875
No 78
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.74 E-value=6.6e-17 Score=158.43 Aligned_cols=237 Identities=15% Similarity=0.129 Sum_probs=141.1
Q ss_pred cccccccChHHHHHHHHHHHHh----hhcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQ----FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~----~~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~ 153 (358)
++++.++.++.+..+.+...+. ..-+++..+++. .++.|++++...+......+|+. ..|. .++++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~l~~~i 84 (412)
T 2x5d_A 11 FARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYST---SRGI---PRLRRAI 84 (412)
T ss_dssp ----------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------C---TTCC---HHHHHHH
T ss_pred hHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCc---HHHHHHH
Confidence 4455555665555444333221 133566544442 58899999987765421223322 1122 3566666
Q ss_pred HHHHHHHcCCC--CCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 154 QKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 154 ~~~la~lfg~~--~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
.+++.+.+|.+ +++ ..+++++|++|+..++.++++|||+|++.++.|.++.. .+...|. +++.+++
T Consensus 85 a~~~~~~~g~~~~~~~--~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~ 152 (412)
T 2x5d_A 85 SHWYRDRYDVQIDPES--EAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIY--------GAVIAGA--QVRSVPL 152 (412)
T ss_dssp HHHHHHHHCCCCCTTT--SEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHHTC--EEEEEEC
T ss_pred HHHHHHHhCCCCCCCc--CEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeec
Confidence 66666666863 211 13455667789999999999999999999886655421 2234455 4445556
Q ss_pred cCCCC-CCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCC-cc--CCC
Q 018300 232 DESTG-LVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VA--DPF 302 (358)
Q Consensus 232 ~~~~~-~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~--~pl 302 (358)
+++++ .+|++++++.+. .++++|++..+++ |...+ +++|.++|+++|+++++|++|+.+.. .+. .+ ..+
T Consensus 153 ~~~~~~~~d~~~l~~~i~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~-~g~~~~~~~~~ 230 (412)
T 2x5d_A 153 VPGIDFFNELERAIRESI-PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVY-DGWKAPSIMQV 230 (412)
T ss_dssp STTSCHHHHHHHHHHTEE-SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC-TTCCCCCGGGS
T ss_pred CCccCCCCCHHHHHHhcc-cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecccccccc-CCCCCCChhhc
Confidence 64423 478999999876 4788888765555 44554 68899999999999999999985432 221 11 112
Q ss_pred C---CCcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 303 K---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 303 ~---gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+ +.|++++|+||++ +|.+.|++++++ ++.+++..
T Consensus 231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~ 269 (412)
T 2x5d_A 231 PGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP------ELVSALAR 269 (412)
T ss_dssp TTGGGTEEEEEECC-CCSCTTSCCEEEEECH------HHHHHHHH
T ss_pred cCccCcEEEEecCccccCCcccceEEEEcCH------HHHHHHHH
Confidence 2 4679999999998 466779999876 45555543
No 79
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.73 E-value=9.7e-18 Score=159.89 Aligned_cols=190 Identities=21% Similarity=0.198 Sum_probs=127.3
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
++++.+++++....... . .|+..+...++ ++++++++|.+. .++++||++|+..++.++++||
T Consensus 15 ~p~~~~~~a~~~~~~~~-------~-~y~~~~~~~~l----~~~la~~~g~~~-----~~~~~~gt~a~~~~~~~~~~~g 77 (347)
T 1jg8_A 15 KPTEEMRKAMAQAEVGD-------D-VYGEDPTINEL----ERLAAETFGKEA-----ALFVPSGTMGNQVSIMAHTQRG 77 (347)
T ss_dssp CCCHHHHHHHHTCCCCC-------G-GGTCCHHHHHH----HHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTT
T ss_pred CCCHHHHHHHhcCCCCC-------c-ccCCChHHHHH----HHHHHHHhCCce-----EEEecCcHHHHHHHHHHhcCCC
Confidence 56788999986532111 0 12223333344 456888999864 3677899999999999999999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCCC---CC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAY---PR 264 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~-----~~klIi~~~s~~---~~ 264 (358)
|+|+++++.|.+.+... ......|. +++++ .+ +++.+|++++++.+++. ++|+|++..+++ |.
T Consensus 78 d~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v-~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~ 148 (347)
T 1jg8_A 78 DEVILEADSHIFWYEVG-----AMAVLSGV--MPHPV-PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGR 148 (347)
T ss_dssp CEEEEETTCHHHHSSTT-----HHHHHTCC--EEEEE-CE-ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSB
T ss_pred CEEEEcCcchhhhcccc-----chhhccCe--EEEEe-cC-CCCccCHHHHHHHhccccccccCceEEEEeccccccCCc
Confidence 99999987554322110 01233455 34444 22 35678999999988642 578888865553 55
Q ss_pred CCC---HHHHHHHHHHcCCEEEEecccccccc-ccCCccCCCC-CCcEEEEcCcCcCccCcEEEEEEeC
Q 018300 265 DFD---YPRMRQIADAVGALLMMDMAHISGLV-AASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 265 ~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~-~~g~~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~ 328 (358)
..+ +++|.++|+++|+++++|++|..+.. ..+..+.++. ++|.+++|+||+|++|.|++++.++
T Consensus 149 ~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 217 (347)
T 1jg8_A 149 VVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR 217 (347)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred cCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH
Confidence 555 57888999999999999999865421 1222112222 7898889999999888777777665
No 80
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.73 E-value=2.8e-17 Score=157.94 Aligned_cols=208 Identities=13% Similarity=0.033 Sum_probs=142.2
Q ss_pred hcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 103 ~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
.-++|-..++. +++.|++++...+... .+|+... + .+ .++++++++|++.++ .+++++|++|
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~~---~----~~----lr~~la~~~~~~~~~---v~~~~g~~~a 94 (365)
T 3get_A 31 EVIKLASNENPFGTPPKAIECLRQNANKA--HLYPDDS---M----IE----LKSTLAQKYKVQNEN---IIIGAGSDQV 94 (365)
T ss_dssp CCEECSSCCCTTCSCHHHHHHHHHHGGGT--TSCCCTT---C----HH----HHHHHHHHHTCCGGG---EEEESSHHHH
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHhh--ccCCCCC---h----HH----HHHHHHHHhCCCcce---EEECCCHHHH
Confidence 45666655554 6899999998876532 3454311 1 13 355678899987642 3445566779
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
+..++.++++|||+|++.++.|.++.. .+...|. +++.++++++++ +|++++++.++ .++++|++..+
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~-~d~~~l~~~l~-~~~~~v~~~~p 162 (365)
T 3get_A 95 IEFAIHSKLNSKNAFLQAGVTFAMYEI--------YAKQCGA--KCYKTQSITHNL-DEFKKLYETHK-DEIKLIFLCLP 162 (365)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHHHTC--EEEECSSSSCCH-HHHHHHHHHTT-TTEEEEEEESS
T ss_pred HHHHHHHHhCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEEecCCCCC-CCHHHHHHHhC-CCCCEEEEcCC
Confidence 999999999999999999876654321 2334565 455555533567 99999999886 47898888655
Q ss_pred CC--CCCCCHHHHHHHHH--HcCCEEEEecccccccc--ccCCccCCC---C--CCcEEEEcCcCcC--ccCcEEEEEEe
Q 018300 261 AY--PRDFDYPRMRQIAD--AVGALLMMDMAHISGLV--AASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 261 ~~--~~~~dl~~I~~ia~--e~g~~livD~Ah~~Gl~--~~g~~~~pl---~--gaDiv~~S~hK~L--~Gp~GG~I~~~ 327 (358)
++ |...+.+++.++++ ++|+++++|++|+.+.. .++.....+ + +.++++.|+||++ +|.+.|+++++
T Consensus 163 ~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 242 (365)
T 3get_A 163 NNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN 242 (365)
T ss_dssp CTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC
T ss_pred CCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC
Confidence 54 56889999888888 67999999999984331 221111111 1 4568899999996 56678999996
Q ss_pred CCCCchhHHHHHHhhcc
Q 018300 328 KDPVLGVELESAINNAV 344 (358)
Q Consensus 328 ~~~~~~~~~~~~i~~~~ 344 (358)
+ ++.+++....
T Consensus 243 ~------~~~~~~~~~~ 253 (365)
T 3get_A 243 A------NIISAFYKLR 253 (365)
T ss_dssp H------HHHHHHHHHS
T ss_pred H------HHHHHHHHhc
Confidence 5 6777776543
No 81
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.73 E-value=1.4e-16 Score=154.97 Aligned_cols=237 Identities=16% Similarity=0.113 Sum_probs=149.0
Q ss_pred cccccccChHHHHHHHHHHHHh----hhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQ----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~----~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~ 153 (358)
+.++....+..+..+.+...+. ...++|-..++ .+++.+++++...+.... .+|+.. .|. .++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g~---~~lr~~i 77 (385)
T 1b5p_A 5 SRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGK-TKYAPP---AGI---PELREAL 77 (385)
T ss_dssp CHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TCC---HHHHHHH
T ss_pred hhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCC---HHHHHHH
Confidence 3445555554443333332221 23455544443 357889999887764422 234321 122 3566666
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC
Q 018300 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (358)
Q Consensus 154 ~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (358)
.+++.+.+|.+.+ ..-.+++++|++|+..++.++++|||+|+++++.|.++.. .+...|. +++.+++++
T Consensus 78 a~~~~~~~g~~~~-~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~ 146 (385)
T 1b5p_A 78 AEKFRRENGLSVT-PEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPE--------MVRFAGG--VVVEVETLP 146 (385)
T ss_dssp HHHHHHTTCCCCC-GGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCG
T ss_pred HHHHHHHhCCCCC-hHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeecCc
Confidence 7777777775421 1112444556779999999999999999999887655421 2345565 445555654
Q ss_pred -CCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccC--CCC-C
Q 018300 234 -STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-Y 304 (358)
Q Consensus 234 -~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl~-g 304 (358)
++..+|++++++.+.. ++|+|++..+++| ...+ +++|.++|+++|++|++|++|+- +...+..++ .++ +
T Consensus 147 ~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~ 224 (385)
T 1b5p_A 147 EEGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH-LLYEGEHFSPGRVAPE 224 (385)
T ss_dssp GGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBSSSCCCCGGGTCTT
T ss_pred ccCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCCHHHcCCC
Confidence 3457999999998764 6888877655554 4544 88999999999999999999874 333321111 112 3
Q ss_pred CcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 305 aDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.++++.|++|++ +|.|.|++++++ ++.+++..
T Consensus 225 ~~i~~~s~SK~~~~~G~RiG~~~~~~------~~~~~l~~ 258 (385)
T 1b5p_A 225 HTLTVNGAAKAFAMTGWRIGYACGPK------EVIKAMAS 258 (385)
T ss_dssp TEEEEEESTTTTTCGGGCCEEEECCH------HHHHHHHH
T ss_pred CEEEEEechhhcCCcccceEEEEeCH------HHHHHHHH
Confidence 468899999997 466789999876 45555544
No 82
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.73 E-value=1.6e-17 Score=163.74 Aligned_cols=170 Identities=21% Similarity=0.172 Sum_probs=124.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
|.+..++++ +++++++|.+. .+.+++|++|+..++.++++|||+|+++++.|+++..... ..+...|
T Consensus 60 ~~~~~~~l~----~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g 126 (404)
T 1e5e_A 60 GNPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFE----HALTKFG 126 (404)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHH----THHHHTT
T ss_pred cChHHHHHH----HHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH----HHHHHcC
Confidence 555544444 45788899863 4678899999999999999999999999987766432100 0123456
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHH-cCCEEEEeccccccccccCCc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADA-VGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e-~g~~livD~Ah~~Gl~~~g~~ 298 (358)
. ++..++.+ |++++++.+++ ++|+|++..+++ |...|+++|.++|++ +|+++++|++|+.+..
T Consensus 127 ~--~~~~v~~~------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~----- 192 (404)
T 1e5e_A 127 I--QVDFINTA------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMI----- 192 (404)
T ss_dssp C--EEEEECTT------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTT-----
T ss_pred C--EEEEECCC------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhh-----
Confidence 5 34444332 78899998864 789998876654 568899999999999 9999999999986542
Q ss_pred cCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhhc
Q 018300 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 299 ~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
..+++ ++|++++|+||++.+|. ||+++++++ .+.+++...
T Consensus 193 ~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~-----~~~~~l~~~ 236 (404)
T 1e5e_A 193 TNPVDFGVDVVVHSATKYINGHTDVVAGLICGKAD-----LLQQIRMVG 236 (404)
T ss_dssp CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHH-----HHHHHHHTC
T ss_pred CCccccCCEEEEEcCccccCCCCCCeEEEEEECHH-----HHHHHHHHH
Confidence 13445 79999999999997764 599998874 333366654
No 83
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.73 E-value=2.6e-17 Score=162.36 Aligned_cols=168 Identities=20% Similarity=0.200 Sum_probs=124.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCC
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (358)
+++..+++| +++++++|.+. .+.++||++|+..++. ++++||+|+++++.|+++..... ..+...|
T Consensus 65 ~~p~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~G 130 (403)
T 3cog_A 65 GNPTRNCLE----KAVAALDGAKY-----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFR----QVASEFG 130 (403)
T ss_dssp -CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHH----HTGGGGT
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHH----HHHHHcC
Confidence 345444554 45788999873 4778999999999999 89999999999988776432100 0123345
Q ss_pred ceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcC-CEEEEeccccccccccCCc
Q 018300 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g-~~livD~Ah~~Gl~~~g~~ 298 (358)
. ++..++.+ |++++++.++. ++++|++..+++ |...|+++|.++|+++| +++++|++|+.+..
T Consensus 131 ~--~v~~v~~~------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~----- 196 (403)
T 3cog_A 131 L--KISFVDCS------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYF----- 196 (403)
T ss_dssp C--EEEEECTT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTT-----
T ss_pred C--EEEEECCC------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCccccc-----
Confidence 5 44444332 89999998864 789998876665 46889999999999999 99999999986542
Q ss_pred cCCCC-CCcEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 299 ~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
..+++ ++|++++|+||+|+||. +|+++++++ ++.+++..
T Consensus 197 ~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~-----~l~~~l~~ 239 (403)
T 3cog_A 197 QRPLALGADISMYSATKYMNGHSDVVMGLVSVNCE-----SLHNRLRF 239 (403)
T ss_dssp CCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCH-----HHHHHHHH
T ss_pred CCccccCCeEEEEcChhhccCCCCCeEEEEEECcH-----HHHHHHHH
Confidence 24556 89999999999999875 599998754 56555544
No 84
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.73 E-value=1.1e-16 Score=155.19 Aligned_cols=214 Identities=14% Similarity=0.065 Sum_probs=141.4
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
.-+++...++ ..++.+.+++...+... ..+|+. ..|. .++++.+.+++.+.+|.+.. ....+++++|++|
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~---~~g~---~~l~~~la~~~~~~~g~~~~-~~~v~~~~g~~~a 102 (388)
T 1j32_A 31 DVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTRYGP---AAGE---PRLREAIAQKLQRDNGLCYG-ADNILVTNGGKQS 102 (388)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCC---TTCC---HHHHHHHHHHHHHHHCCCCC-GGGEEEESHHHHH
T ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCC---CCCC---HHHHHHHHHHHHHhcCCCCC-hhhEEEcCCHHHH
Confidence 3455554444 35789999988776432 123332 1122 36777777778877786421 1112344456789
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
+..++.++++|||+|++.++.|.++.. .+...|.. ++.++.+++ ++.+|+++|++.++. ++++|++..
T Consensus 103 ~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 171 (388)
T 1j32_A 103 IFNLMLAMIEPGDEVIIPAPFWVSYPE--------MVKLAEGT--PVILPTTVETQFKVSPEQIRQAITP-KTKLLVFNT 171 (388)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCE--EEEECCCGGGTTCCCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCE--EEEecCCcccCCCCCHHHHHHhcCc-CceEEEEeC
Confidence 999999999999999999887665421 23345654 444455532 357899999998864 688887765
Q ss_pred CCC--CCCC---CHHHHHHHHHHcCCEEEEeccccccccccCC-ccC--CCC----CCcEEEEcCcCcC--ccCcEEEEE
Q 018300 260 SAY--PRDF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK----YCDVVTTTTHKSL--RGPRGGMIF 325 (358)
Q Consensus 260 s~~--~~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~~--pl~----gaDiv~~S~hK~L--~Gp~GG~I~ 325 (358)
+++ |... ++++|.++|+++|+++++|++|+.+ ...+. .++ .++ +.|+++.|+||++ +|.+.|+++
T Consensus 172 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 250 (388)
T 1j32_A 172 PSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKI-LYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA 250 (388)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC-BCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhc-ccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEE
Confidence 554 4454 4899999999999999999998743 33322 111 121 4689999999998 456679999
Q ss_pred EeCCCCchhHHHHHHhh
Q 018300 326 FKKDPVLGVELESAINN 342 (358)
Q Consensus 326 ~~~~~~~~~~~~~~i~~ 342 (358)
+++ ++.+++..
T Consensus 251 ~~~------~~~~~l~~ 261 (388)
T 1j32_A 251 GPV------PLVKAATK 261 (388)
T ss_dssp CCH------HHHHHHHH
T ss_pred eCH------HHHHHHHH
Confidence 876 45555543
No 85
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.73 E-value=4.3e-17 Score=156.80 Aligned_cols=209 Identities=14% Similarity=0.064 Sum_probs=141.8
Q ss_pred hcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCCHH
Q 018300 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSP 179 (358)
Q Consensus 103 ~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~-~~~~~~v~V~~~SGt~ 179 (358)
.-++|-..++. +++.|++++...+.+....+|+.. + ..+ .++++++++|+ +++ ..+++++|++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~---~~~----l~~~la~~~g~~~~~---~i~~~~g~t~ 96 (367)
T 3euc_A 31 GLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVP----S---SEA----LRAKLKEVMQVPAGM---EVLLGNGSDE 96 (367)
T ss_dssp TCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCC----C---HHH----HHHHHHHHHTCCTTC---EEEEEEHHHH
T ss_pred CeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----c---HHH----HHHHHHHHhCCCCcc---eEEEcCCHHH
Confidence 34666555554 689999999887764322344331 1 123 45568889998 443 1234445667
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
|+..++.++++|||+|++.++.|.++.. .+...|. +++.+++++ ++.+|++++++.++..++++|++..
T Consensus 97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~ 165 (367)
T 3euc_A 97 IISMLALAAARPGAKVMAPVPGFVMYAM--------SAQFAGL--EFVGVPLRA-DFTLDRGAMLAAMAEHQPAIVYLAY 165 (367)
T ss_dssp HHHHHHHHTCCTTCEEEEEESCSCCSCH--------HHHTTTC--EEEEEECCT-TSCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHHcCCCCEEEEcCCCHHHHHH--------HHHHcCC--eEEEecCCC-CCCCCHHHHHHHhhccCCCEEEEcC
Confidence 9999999999999999998876655321 2344565 445555664 5689999999998765789888866
Q ss_pred CCCC--CCC---CHHHHHHHHHHc--CCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCc-CccCcEEEEEEeCC
Q 018300 260 SAYP--RDF---DYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKS-LRGPRGGMIFFKKD 329 (358)
Q Consensus 260 s~~~--~~~---dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~-L~Gp~GG~I~~~~~ 329 (358)
++++ ... ++++|.++|+++ |+++++|++|+. +...+..+ .++ +.++++.|+||+ ++|.+.|++++++
T Consensus 166 ~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~-~~~~~~~~-~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~- 242 (367)
T 3euc_A 166 PNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP-FAQESWMS-RLTDFGNLLVMRTVSKLGLAGIRLGYVAGDP- 242 (367)
T ss_dssp SCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCC-SSSCCSGG-GGGTCTTEEEEEECCCTTSCSCCEEEEEECH-
T ss_pred CCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchh-hcccchHH-HHhhCCCEEEEecchhhcccccCceeeeeCH-
Confidence 5554 444 477888889999 999999999873 33222111 122 456889999998 3456779999876
Q ss_pred CCchhHHHHHHhhcc
Q 018300 330 PVLGVELESAINNAV 344 (358)
Q Consensus 330 ~~~~~~~~~~i~~~~ 344 (358)
++.+++....
T Consensus 243 -----~~~~~~~~~~ 252 (367)
T 3euc_A 243 -----QWLEQLDKVR 252 (367)
T ss_dssp -----HHHHHHGGGC
T ss_pred -----HHHHHHHHhC
Confidence 6777776643
No 86
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.73 E-value=4.7e-17 Score=159.45 Aligned_cols=230 Identities=11% Similarity=0.036 Sum_probs=152.7
Q ss_pred hcccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhccc-CCCCCCCcCCCCcHHHHHHHHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQK 155 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~-~~G~pg~r~~~G~~~~~~lE~~~~~ 155 (358)
+++++..+++..+..+.+... ...-|+|-.+++ .+++.|++++...+.... ..+|+.. .|. .++++.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~---~g~---~~lr~~la~ 78 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKLAS-EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKT---FGY---PPLTKILAS 78 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHHHH-TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCT---TCC---HHHHHHHHH
T ss_pred HHHHhhccCccHHHHHHHHhh-cCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCC---CCC---HHHHHHHHH
Confidence 456777888877665544332 234556654443 478999999988776432 2234331 122 256666777
Q ss_pred HHHHHcCCCCCCC-cceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-
Q 018300 156 RALAAFNLDENKW-GVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE- 233 (358)
Q Consensus 156 ~la~lfg~~~~~~-~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~- 233 (358)
++.+.+|.+.+ . ...+++++|++|+..++.++++|||+|++.++.|.++.. .+...|.. ++++++++
T Consensus 79 ~~~~~~g~~~~-~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~--~~~~~~~~~ 147 (422)
T 3fvs_A 79 FFGELLGQEID-PLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGGR--PVFVSLKPG 147 (422)
T ss_dssp HHHHHHTCCCC-HHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCE--EEEEECBCC
T ss_pred HHHHhhCCCCC-CCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH--------HHHHcCCE--EEEEecccc
Confidence 78878886532 1 013445566779999999999999999999887665421 23345654 44444543
Q ss_pred ----------CCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCC---CHHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 234 ----------STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 234 ----------~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
.+..+|++++++.++. ++++|++..++++ ... ++++|.++|+++|+++++|++|+. +...+..
T Consensus 148 ~~~~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~ 225 (422)
T 3fvs_A 148 PIQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQW-MVYDGHQ 225 (422)
T ss_dssp CCCSSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTCC
T ss_pred cccccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchh-hccCCCC
Confidence 2346899999998864 6888877666654 455 589999999999999999999873 3433322
Q ss_pred cCCC---C---CCcEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 299 ADPF---K---YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 299 ~~pl---~---gaDiv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
+.++ + +.++++.|++|++ +|.+.|++++++
T Consensus 226 ~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~ 263 (422)
T 3fvs_A 226 HISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD 263 (422)
T ss_dssp CCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH
T ss_pred CCChhhcccccCcEEEEecchhccCCccceEEEEEeCH
Confidence 2222 1 3458899999997 467779999877
No 87
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.73 E-value=1.7e-17 Score=165.56 Aligned_cols=168 Identities=18% Similarity=0.135 Sum_probs=122.5
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|.+.|+ +++..+++|+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++......
T Consensus 73 ~~~y~r~--~~p~~~~le~----~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~-- 139 (430)
T 3ri6_A 73 GHVYSRS--SNPTVEDLEQ----RLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQ-- 139 (430)
T ss_dssp ---------CCHHHHHHHH----HHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH--
T ss_pred CccccCC--CCHHHHHHHH----HHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH--
Confidence 4444443 4565566654 5788999875 3678899999999999999999999999987776532110
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
..+...|. ++..++.+ |++++++.++. ++|+|++..+++ +...|+++|.++|+++|++|++|++|+.
T Consensus 140 --~~~~~~G~--~~~~v~~~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~ 208 (430)
T 3ri6_A 140 --KTLPSFGI--EVRFVDVM------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTP 208 (430)
T ss_dssp --THHHHTTC--EEEEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSC
T ss_pred --HHHHHcCC--EEEEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc
Confidence 01234465 44443332 89999998864 789998876654 5688999999999999999999999986
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccC---cEEEEEEeCC
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKD 329 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp---~GG~I~~~~~ 329 (358)
+.. ..+++ |+|++++|++|+|.|+ .||+++++..
T Consensus 209 ~~~-----~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~ 246 (430)
T 3ri6_A 209 PYL-----LEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGL 246 (430)
T ss_dssp TTT-----CCGGGGTCSEEEEECCCEEETTEEECCEEEEECSC
T ss_pred ccc-----CChHHcCCEEEEECCcccccCCCCceEEEEEECCh
Confidence 643 34555 8999999999999887 6788886543
No 88
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.73 E-value=2.2e-17 Score=166.22 Aligned_cols=199 Identities=16% Similarity=0.098 Sum_probs=139.0
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~-~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
++.+.+++.+.+.. +...++. .+...+...++|+.+++++++++|++ ..+ ..+++++|++|+..++.++.+
T Consensus 77 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~~~~la~~~g~~~~~~--~~~~~~ggt~a~~~a~~a~~~~~~ 151 (497)
T 3mc6_A 77 GDDLIHLQTIAYEK-YCVANQL--HPDVFPAVRKMESEVVSMVLRMFNAPSDTG--CGTTTSGGTESLLLACLSAKMYAL 151 (497)
T ss_dssp CHHHHHHHHHHHHH-TSSCBTT--CTTTCHHHHHHHHHHHHHHHHHTTCCTTTC--CEEEESSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH-HhhcCCC--CcccChHHHHHHHHHHHHHHHHhCCCCCCC--eEEEcCcHHHHHHHHHHHHHHHHH
Confidence 46777777665543 2111222 12334456688888999999999998 222 245667788899999998865
Q ss_pred --CC---CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CC
Q 018300 191 --PH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YP 263 (358)
Q Consensus 191 --pG---D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~ 263 (358)
+| |+|+++.+.|.++. +.+...|.. ++.++++++++.+|+++|++.+++ ++++|++..++ +|
T Consensus 152 ~~~g~~~~~Vi~~~~~h~~~~--------~~~~~~G~~--~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG 220 (497)
T 3mc6_A 152 HHRGITEPEIIAPVTAHAGFD--------KAAYYFGMK--LRHVELDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHG 220 (497)
T ss_dssp HHSCCSSCEEEEETTSCHHHH--------HHHHHSCCE--EEEECBCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTC
T ss_pred hcCCCCCceEEEeCCccHHHH--------HHHHHcCCe--EEEEecCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCC
Confidence 56 99999886554431 234456764 445556644678999999998865 68888886655 56
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeccccccccc----c--CCc-cCCC--CCCcEEEEcCcCcCccCc-EEEEEEeCC
Q 018300 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVA----A--SVV-ADPF--KYCDVVTTTTHKSLRGPR-GGMIFFKKD 329 (358)
Q Consensus 264 ~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~----~--g~~-~~pl--~gaDiv~~S~hK~L~Gp~-GG~I~~~~~ 329 (358)
...|+++|.++|+++|+++++|++|+.+... . +.. +..+ .++|++++|+||++.||. .|+++++++
T Consensus 221 ~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~ 296 (497)
T 3mc6_A 221 IADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNS 296 (497)
T ss_dssp CCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSH
T ss_pred cCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCH
Confidence 7889999999999999999999999854332 0 111 1112 289999999999986665 488888874
No 89
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.73 E-value=1.2e-16 Score=155.27 Aligned_cols=203 Identities=14% Similarity=0.056 Sum_probs=133.4
Q ss_pred hhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCC
Q 018300 102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 177 (358)
Q Consensus 102 ~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SG 177 (358)
+.-+++-.+++ .+++.|++++...+.+.. .+|+.. .|. .++++.+.+++.+.+|. +++ ..+++++|
T Consensus 31 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g~---~~lr~~ia~~~~~~~g~~~~~~---~v~~t~g~ 100 (391)
T 3h14_A 31 RRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LGYTVA---LGL---PALRQRIARLYGEWYGVDLDPG---RVVITPGS 100 (391)
T ss_dssp CCCEECCCSSCSSCSCHHHHHHHHHHHC--------------CC---HHHHHHHHHHHHHHHCCCCCGG---GEEEESSH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCh---HHHHHHHHHHHHHHhCCCCCHH---HEEEecCh
Confidence 35566655544 347889999988765422 233321 122 35666667777777774 333 23445566
Q ss_pred HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC-CCCCHHHHHHHhhhcCCeEEE
Q 018300 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLII 256 (358)
Q Consensus 178 t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~iD~d~le~~i~~~~~klIi 256 (358)
++|+..++.++++|||+|++.++.|.++.. .+...|.. +.++++++++ ..+|++++++. ++++|+
T Consensus 101 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~----~~~~v~ 166 (391)
T 3h14_A 101 SGGFLLAFTALFDSGDRVGIGAPGYPSYRQ--------ILRALGLV--PVDLPTAPENRLQPVPADFAGL----DLAGLM 166 (391)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCE--EEEEECCGGGTTSCCHHHHTTS----CCSEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCCE--EEEeecCcccCCCCCHHHHHhc----CCeEEE
Confidence 789999999999999999998876655421 23445654 4455555433 36899998875 688887
Q ss_pred EcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcC--ccCcEEEEEEe
Q 018300 257 AGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 257 ~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L--~Gp~GG~I~~~ 327 (358)
+..++++ ...+ +++|.++|+++|+++++|++|+. +...+......+ ..++++.|++|++ +|.+.|+++++
T Consensus 167 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 245 (391)
T 3h14_A 167 VASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHG-IEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVP 245 (391)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECC
T ss_pred ECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchh-cccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeC
Confidence 7666554 4555 88899999999999999999873 333332222222 4568899999998 56677999987
Q ss_pred CC
Q 018300 328 KD 329 (358)
Q Consensus 328 ~~ 329 (358)
++
T Consensus 246 ~~ 247 (391)
T 3h14_A 246 ED 247 (391)
T ss_dssp GG
T ss_pred HH
Confidence 74
No 90
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.73 E-value=2.6e-16 Score=151.70 Aligned_cols=206 Identities=14% Similarity=0.032 Sum_probs=137.7
Q ss_pred hcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 103 ~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
.-+++...++. .++.+.+++...+... ..+|+. ..|. .++++.+.+++.+.+|.+.. ....+++++|++|
T Consensus 30 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~---~~~~---~~l~~~la~~~~~~~g~~~~-~~~v~~~~g~~~a 101 (370)
T 2z61_A 30 KVIHLEIGEPDFNTPKPIVDEGIKSLKEG-KTHYTD---SRGI---LELREKISELYKDKYKADII-PDNIIITGGSSLG 101 (370)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCC---TTCC---HHHHHHHHHHHHHHSSCCCC-GGGEEEESSHHHH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHHcC-ccCCCC---CCCC---HHHHHHHHHHHHHHhCCCCC-hhhEEECCChHHH
Confidence 34555544442 4789999998776542 123332 1122 35777767777766664321 1123445567789
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
+..++.++++|||+|++.++.|.++.. .+...|. +++.++ +|+++|++.+++ ++++|++..+
T Consensus 102 ~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~-------~d~~~l~~~l~~-~~~~v~~~~p 163 (370)
T 2z61_A 102 LFFALSSIIDDGDEVLIQNPCYPCYKN--------FIRFLGA--KPVFCD-------FTVESLEEALSD-KTKAIIINSP 163 (370)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEEC-------SSHHHHHHHCCS-SEEEEEEESS
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeC-------CCHHHHHHhccc-CceEEEEcCC
Confidence 999999999999999999987765421 2334565 344432 789999998864 6788877655
Q ss_pred CC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccC--CC---CCCcEEEEcCcCcC--ccCcEEEEEEeCCCC
Q 018300 261 AY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF---KYCDVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (358)
Q Consensus 261 ~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl---~gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~ 331 (358)
++ |...+.+ |.++|+++|+++++|++|+.+. ..+...+ .+ .+.|+++.|+||++ +|.+.|++++++
T Consensus 164 ~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--- 238 (370)
T 2z61_A 164 SNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLV-YEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND--- 238 (370)
T ss_dssp CTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCB-SSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH---
T ss_pred CCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcc-cCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH---
Confidence 54 5688999 9999999999999999998543 3332111 12 15789999999998 455679999887
Q ss_pred chhHHHHHHhh
Q 018300 332 LGVELESAINN 342 (358)
Q Consensus 332 ~~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 239 ---~~~~~~~~ 246 (370)
T 2z61_A 239 ---EIIEAILK 246 (370)
T ss_dssp ---HHHHHHHH
T ss_pred ---HHHHHHHH
Confidence 45555543
No 91
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.73 E-value=2.9e-17 Score=160.08 Aligned_cols=188 Identities=21% Similarity=0.178 Sum_probs=133.0
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all 189 (358)
++..+++.|++++. .+ + +. +.+++..++.++++||++..+ ..+++++|++|+..++.++
T Consensus 38 ~~~~~~~~v~~a~~-----~~--~--------~~---~~~~~~~~~~~a~~~g~~~~~--~~~~~~ggt~a~~~~~~~~- 96 (374)
T 2aeu_A 38 GGFLIDEKDKALLN-----TY--I--------GS---SYFAEKVNEYGLKHLGGDEND--KCVGFNRTSSAILATILAL- 96 (374)
T ss_dssp CCCCCCHHHHHHHT-----ST--T--------HH---HHHHHHHHHHHHHHHTCCTTE--EEEEESSHHHHHHHHHHHH-
T ss_pred CCCCCCHHHHHHHH-----Hh--c--------Cc---hHHHHHHHHHHHHHhCCCCcc--eEEEEcChHHHHHHHHHhC-
Confidence 45688999999985 11 1 11 234555666778899984211 1366788899999999987
Q ss_pred cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeE-EEEcCCCCC---CC
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL-IIAGASAYP---RD 265 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~kl-Ii~~~s~~~---~~ 265 (358)
|||+|+++++.|++|+... ..+...|. +++.+ .|++++++. . .++|+ |++..++++ ..
T Consensus 97 -~gd~Vl~~~~~y~~~~~~~-----~~~~~~g~--~~~~v--------~d~~~l~~~-~-~~~~~~v~~~~p~nptG~~~ 158 (374)
T 2aeu_A 97 -KPKKVIHYLPELPGHPSIE-----RSCKIVNA--KYFES--------DKVGEILNK-I-DKDTLVIITGSTMDLKVIEL 158 (374)
T ss_dssp -CCSEEEEECSSSSCCTHHH-----HHHHHTTC--EEEEE--------SCHHHHHTT-C-CTTEEEEEECBCTTSCBCCH
T ss_pred -CCCEEEEecCCCCccHHHH-----HHHHHcCc--EEEEe--------CCHHHHHhc-C-CCccEEEEEccCCCCCCCCc
Confidence 9999999998887765411 12234465 33333 378999887 4 47899 888766654 46
Q ss_pred CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 266 ~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.|+++|.++|+++|+++++|++|..+.......+++++ ++|++++|+||+|+||++|++++++ ++.+++..
T Consensus 159 ~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~------~~~~~l~~ 230 (374)
T 2aeu_A 159 ENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKK------ELVDKIYI 230 (374)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEH------HHHHHHHH
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECH------HHHHHHHH
Confidence 78999999999999999999998765310110111334 7899999999999999999999987 55555554
No 92
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.73 E-value=4.4e-17 Score=157.42 Aligned_cols=226 Identities=13% Similarity=0.129 Sum_probs=149.0
Q ss_pred cChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC-
Q 018300 86 ADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN- 162 (358)
Q Consensus 86 ~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg- 162 (358)
....+|+...++.. ...-+++..+++ ..++.|++++...+.+. ..+|+. +. .++++.+++++++++|
T Consensus 17 ~g~~~~d~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~~---~~~~~~l~~~l~~~~g~ 86 (391)
T 4dq6_A 17 NFSSKWSEMEKKYG-TNDLLPMWVADMDFKAAPCIIDSLKNRLEQE-IYGYTT-----RP---DSYNESIVNWLYRRHNW 86 (391)
T ss_dssp TTBHHHHCHHHHHS-CSCSEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCBC-----CC---HHHHHHHHHHHHHHHCC
T ss_pred CCceeeeecccccC-CCCceeccccCCCCCCCHHHHHHHHHHHhCC-CCCCCC-----CC---HHHHHHHHHHHHHHhCC
Confidence 34556654433221 124456654444 45799999998877542 122221 22 3566778888999999
Q ss_pred -CCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec---CCCCCC
Q 018300 163 -LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---ESTGLV 238 (358)
Q Consensus 163 -~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~i 238 (358)
++.+ ..+++++|++|+..++.++++|||+|++.++.|.++.. .+...|. +++.++++ +.+..+
T Consensus 87 ~~~~~---~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~ 153 (391)
T 4dq6_A 87 KIKSE---WLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNS--------VVKNNNR--ELIISPLQKLENGNYIM 153 (391)
T ss_dssp CCCGG---GEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHH--------HHHHTTC--EEEECCCEECTTSCEEC
T ss_pred CCcHH---HeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHH--------HHHHcCC--eEEeeeeeecCCCceEe
Confidence 5553 23445566779999999999999999999876665421 2334565 44555555 222358
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCC--CC---CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCc-----
Q 018300 239 DYDMLEKTAILFRPKLIIAGASAYP--RD---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD----- 306 (358)
Q Consensus 239 D~d~le~~i~~~~~klIi~~~s~~~--~~---~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaD----- 306 (358)
|++++++.++. +++|++..++++ .. .++++|.++|+++|+++++|++|+. +...+..+.++. ..|
T Consensus 154 d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~ 230 (391)
T 4dq6_A 154 DYEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSD-IILKKHKHIPMASISKEFEKNT 230 (391)
T ss_dssp CHHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCTTCCCCCGGGSCHHHHHTE
T ss_pred eHHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccc-cccCCCCccCHHHcCccccCcE
Confidence 99999999875 888877665554 44 4588999999999999999999874 333333222332 222
Q ss_pred EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 307 iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+++.|+||++ +|.+.|+++++++ ++.+++..
T Consensus 231 i~~~s~sK~~g~~G~r~G~~~~~~~-----~~~~~~~~ 263 (391)
T 4dq6_A 231 ITCMAPTKTFNIAGLQSSYVVLPDE-----KDYKLLDD 263 (391)
T ss_dssp EEEECSHHHHTCGGGCCEEEECCSH-----HHHHHHHH
T ss_pred EEEEechhhccCcccceEEEEeCCH-----HHHHHHHH
Confidence 8899999997 5667899998874 55555544
No 93
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.72 E-value=2.6e-17 Score=161.06 Aligned_cols=154 Identities=18% Similarity=0.183 Sum_probs=117.0
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
.++++++++|.+. .+.++||++|+..++.++++|||+|++.++.|+++..... ......|. ++..++.
T Consensus 69 l~~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~- 136 (398)
T 2rfv_A 69 LEKKLAVLERGEA-----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLS----HSMPKFGI--NVRFVDA- 136 (398)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHH----THHHHTTC--EEEEECT-
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHHcCC--EEEEeCC-
Confidence 5567889999873 4778899999999999999999999999887766432100 00134455 3444333
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEE
Q 018300 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVT 309 (358)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~ 309 (358)
.|++++++.+++ ++++|++..+++ |...|+++|.++|+++|+++++|++|+.+.. ..++. ++|+++
T Consensus 137 -----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~-----~~~~~~~~di~~ 205 (398)
T 2rfv_A 137 -----AKPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYC-----QQPLQLGADIVV 205 (398)
T ss_dssp -----TSHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTT-----CCGGGGTCSEEE
T ss_pred -----CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc-----CCchhhCCcEEE
Confidence 289999998864 788888876654 5688999999999999999999999986653 12444 799999
Q ss_pred EcCcCcCccCc---EEEEEEeCC
Q 018300 310 TTTHKSLRGPR---GGMIFFKKD 329 (358)
Q Consensus 310 ~S~hK~L~Gp~---GG~I~~~~~ 329 (358)
+|+||+|.||. ||+++++++
T Consensus 206 ~s~sK~~~~~g~~~~G~~~~~~~ 228 (398)
T 2rfv_A 206 HSVTKYINGHGDVIGGIIVGKQE 228 (398)
T ss_dssp EETTTTTTCSSCCCCEEEEECHH
T ss_pred EeCcccccCCCCceEEEEEECHH
Confidence 99999997764 499998874
No 94
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.72 E-value=1.7e-16 Score=161.16 Aligned_cols=174 Identities=13% Similarity=0.044 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc-------c-CCC------EEEecCCCCCcccccc
Q 018300 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-------K-PHD------RIMGLDLPHGGHLSHG 209 (358)
Q Consensus 144 ~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all-------~-pGD------~Vl~~~~~~ggh~s~~ 209 (358)
+...++|+.+++++++++|.+.. ..+++.+||+||..++.++. + +|| +|++++..|.+..
T Consensus 144 ~~~~~le~~~~~~la~l~g~~~~---~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~--- 217 (515)
T 2jis_A 144 PVFVLMEEEVLRKLRALVGWSSG---DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ--- 217 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSC---EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH---
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC---CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH---
Confidence 45567888899999999999853 23555677889998887762 3 686 7888776554432
Q ss_pred cccchhccccCCceE-EEEeceecCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCC--CCCCCCHHHHHHHHHHcCCE
Q 018300 210 FMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASA--YPRDFDYPRMRQIADAVGAL 281 (358)
Q Consensus 210 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~iD~d~le~~i~~~-----~~klIi~~~s~--~~~~~dl~~I~~ia~e~g~~ 281 (358)
+.+...|... +++.++++ +++.+|+++|++.+++. +|++|++...+ +|...|+++|.++|+++|++
T Consensus 218 -----~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~ 291 (515)
T 2jis_A 218 -----KGAAFLGLGTDSVRVVKAD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLW 291 (515)
T ss_dssp -----HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCE
T ss_pred -----HHHHHcCCCCCcEEEEecC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCe
Confidence 1223334411 23344455 36789999999988652 47887775543 56788999999999999999
Q ss_pred EEEeccccccccccCCccCCCC---CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 282 LMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 282 livD~Ah~~Gl~~~g~~~~pl~---gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+++|++|+.+....+.+...+. ++|++++|+||++.+|.| |+++++++
T Consensus 292 l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~ 343 (515)
T 2jis_A 292 LHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDT 343 (515)
T ss_dssp EEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCC
T ss_pred EEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeCh
Confidence 9999999877654322211232 789999999999988876 88888764
No 95
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.72 E-value=1e-16 Score=156.87 Aligned_cols=167 Identities=19% Similarity=0.148 Sum_probs=123.0
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
+|...|| +++..+++ ++++++++|.+. .+.++||+.|+..++.+++++||+|+++++.|+++.....
T Consensus 50 ~~~y~~~--~~~~~~~l----~~~la~~~g~~~-----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~-- 116 (389)
T 3acz_A 50 GHIYSRL--GNPTVEQF----EEMVCSIEGAAG-----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFT-- 116 (389)
T ss_dssp CCCBTTT--CCHHHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHH--
T ss_pred CcccCCC--CChHHHHH----HHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH--
Confidence 4444443 34544444 456888999873 4678899999999999999999999999987776422100
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
......|. ++..++. .|++++++.+++ ++++|++..+++ |...|+++|.++|+++|+++++|++|+.
T Consensus 117 --~~~~~~g~--~~~~v~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~ 185 (389)
T 3acz_A 117 --HWLPRFGI--EVDLIDT------SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTS 185 (389)
T ss_dssp --HHHHHTTC--EEEEECT------TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTC
T ss_pred --HHHHHcCC--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc
Confidence 00234565 3344332 489999998864 688998876654 5688999999999999999999999986
Q ss_pred cccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEeC
Q 018300 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (358)
Q Consensus 291 Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~~ 328 (358)
+.. ..+++ ++|++++|+||++.||. ||++++++
T Consensus 186 ~~~-----~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 186 PCF-----LKPLELGADIALHSVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp TTT-----CCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESS
T ss_pred ccc-----cCccccCCeEEEECChhhccCCCCceeEEEEECc
Confidence 643 13455 89999999999998875 58999887
No 96
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.72 E-value=2.1e-16 Score=151.70 Aligned_cols=230 Identities=16% Similarity=0.062 Sum_probs=148.0
Q ss_pred cccccccChHHHHHHHHHHHHh---hhcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHH
Q 018300 80 DYSLGEADPEVCEIITKEKERQ---FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (358)
Q Consensus 80 ~~~l~~~d~~~~~~i~~e~~~~---~~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~ 154 (358)
...++++.++.......+..+. ..-++|-..++. +++.|++++...+... .+||. ....+ .+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~----lr 73 (363)
T 3ffh_A 7 KKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSKKVAAIQANSSVET--EIYPD-------GWASS----LR 73 (363)
T ss_dssp CGGGTTCCC----CHHHHHHHTTTCSCCEECSSCSCTTCCCHHHHHHHHTCBSCC--CBC-----------CHH----HH
T ss_pred hHHHHhCCCCCCCCCHHHHHHhcCCCceEEccCCCCCCCCCHHHHHHHHHHHHHh--hcCCC-------cchHH----HH
Confidence 3445556665544333333322 234566555554 5899999998765321 22332 11122 45
Q ss_pred HHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC
Q 018300 155 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (358)
Q Consensus 155 ~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~ 234 (358)
+++++++|+++++ .+++++|++|+..++.+++++||+|+++++.|.++.. .+...|. +++.+++++
T Consensus 74 ~~la~~~~~~~~~---v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~- 139 (363)
T 3ffh_A 74 KEVADFYQLEEEE---LIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQ--------NALIEGA--EVREIPLLQ- 139 (363)
T ss_dssp HHHHHHHTCCGGG---EEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHH--------HHHHHTC--EEEEEECCT-
T ss_pred HHHHHHhCCChhh---EEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHH--------HHHHcCC--EEEEecCCC-
Confidence 6688999987642 3445566779999999999999999998875544321 2334465 445555664
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHc--CCEEEEeccccccccccCCccCCCC-----CC
Q 018300 235 TGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-----YC 305 (358)
Q Consensus 235 ~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~--g~~livD~Ah~~Gl~~~g~~~~pl~-----ga 305 (358)
++.+|++++++.++. ++++|++..+++ |...|.+++.++++.+ |+++++|++|+.. .. +..+..+. ..
T Consensus 140 ~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~-~~-~~~~~~~~~~~~~~~ 216 (363)
T 3ffh_A 140 DGEHDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEY-VT-PQPEKHEKLVRTYKN 216 (363)
T ss_dssp TSCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGG-CS-SCCCCCGGGGGTCTT
T ss_pred CCCcCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhh-cC-ccccCHHHHhhcCCC
Confidence 578999999998864 788888765554 5688999999999888 9999999999833 22 22222221 33
Q ss_pred cEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhccC
Q 018300 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVF 345 (358)
Q Consensus 306 Div~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~~f 345 (358)
++++.|++|++ +|.+.|++++++ ++.+++.....
T Consensus 217 ~i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~l~~~~~ 252 (363)
T 3ffh_A 217 LIITRTFSKIYGLASARVGYGIADK------EIIRQLNIVRP 252 (363)
T ss_dssp EEEEEESSSTTCCSSCCCEEEEECH------HHHHHHHHTCC
T ss_pred EEEEeechhhhcCchhceeeeecCH------HHHHHHHHhCC
Confidence 47889999997 456669999866 67777766433
No 97
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.72 E-value=1e-16 Score=158.69 Aligned_cols=190 Identities=19% Similarity=0.147 Sum_probs=129.4
Q ss_pred ccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHH
Q 018300 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (358)
Q Consensus 107 lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~ 186 (358)
+..+.++..+.+.++.... .+. ..|+.+.|+ +++...++ ++++++++|.+. .+.++||+.|+..++.
T Consensus 25 i~~~~~~~~~~~~~~~~~~-~~~-~~~~~y~~~--~~~~~~~l----~~~la~~~g~~~-----~v~~~sGt~A~~~~l~ 91 (421)
T 2ctz_A 25 IYPTTSYVFKSPEHAANLF-ALK-EFGNIYSRI--MNPTVDVL----EKRLAALEGGKA-----ALATASGHAAQFLALT 91 (421)
T ss_dssp BCCCSCBCCSCHHHHHHHH-TTT-TGGGSCBTT--BCHHHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHH
T ss_pred eeccceeeeCCHHHHHHhh-ccc-cCCCcccCC--CChHHHHH----HHHHHHHhCCCc-----eEEecCHHHHHHHHHH
Confidence 3345555555554443221 111 123444443 33444444 456889999874 3778899999999999
Q ss_pred HhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEec-eecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--C
Q 018300 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--P 263 (358)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~ 263 (358)
+++++||+|+++++.|+++..... ......|. ++..+ +.+ |++++++.+++ ++++|++..+++ |
T Consensus 92 ~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~~~------d~~~l~~~i~~-~~~~v~~~~~~n~~G 158 (421)
T 2ctz_A 92 TLAQAGDNIVSTPNLYGGTFNQFK----VTLKRLGI--EVRFTSREE------RPEEFLALTDE-KTRAWWVESIGNPAL 158 (421)
T ss_dssp HHCCTTCEEEECSCCCHHHHHHHH----THHHHTTC--EEEECCTTC------CHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred HHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCC--EEEEECCCC------CHHHHHHhhcc-CCeEEEEECCCCCCC
Confidence 999999999999987766532110 00133454 44454 332 89999998865 789988876554 5
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeccc-cccccccCCccCCCC-CCcEEEEcCcCcCccCc---EEEEEEe
Q 018300 264 RDFDYPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFK 327 (358)
Q Consensus 264 ~~~dl~~I~~ia~e~g~~livD~Ah-~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp~---GG~I~~~ 327 (358)
...|+++|.++|+++|+++++|++| +.|.. ..++. ++|++++|+||+|.||. ||+++.+
T Consensus 159 ~~~~l~~i~~~a~~~g~~livD~~~~~~g~~-----~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~ 222 (421)
T 2ctz_A 159 NIPDLEALAQAAREKGVALIVDNTFGMGGYL-----LRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDG 222 (421)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECGGGGGGTS-----CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred cccCHHHHHHHHHHcCCEEEEECCccccccc-----CCccccCCeEEEECCcccccCCCCcEEEEEEec
Confidence 6889999999999999999999999 77742 13445 79999999999998754 5666653
No 98
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.72 E-value=3.3e-17 Score=156.27 Aligned_cols=199 Identities=11% Similarity=0.044 Sum_probs=135.5
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHH
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~ 182 (358)
+.+++.|++..+++.|++++...+.+... ++. +.+..+. ++.+.+++++++++|.+..+ ..+++.+|+.|+.
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~~----~~~~~~~-~~~~~~~~~la~~~g~~~~~--~v~~~~g~t~al~ 75 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIG-VIS----HRSKKFE-EVYKTASDNLKTLLELPSNY--EVLFLASATEIWE 75 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTT-TSC----TTSHHHH-HHHHHHHHHHHHHTTCCTTE--EEEEESCHHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCcc-CcC----CCCHHHH-HHHHHHHHHHHHHhCCCCCc--EEEEeCCchHHHH
Confidence 34677889999999999888777654321 111 1122333 34445788899999986422 2345567788999
Q ss_pred HHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-
Q 018300 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (358)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~- 261 (358)
.++.++.+| +.|++.. +++++.+. ..+...|..+ ..++.+ .++.+|+++++ +. .++|+|++..++
T Consensus 76 ~~~~~l~~~-~~i~~~~----~~~~~~~~---~~~~~~g~~~--~~v~~~-~~~~~d~~~l~--~~-~~~~~v~~~~~~n 141 (362)
T 3ffr_A 76 RIIQNCVEK-KSFHCVN----GSFSKRFY---EFAGELGREA--YKEEAA-FGKGFYPADIT--VP-ADAEIICLTHNET 141 (362)
T ss_dssp HHHHHHCSS-EEEEEEC----SHHHHHHH---HHHHHTTCEE--EEEECC-TTCCCCGGGCC--CC-TTCCEEEEESEET
T ss_pred HHHHhccCC-cEEEEcC----cHHHHHHH---HHHHHhCCCe--EEEecC-CCCCCCHHHHh--cc-CCccEEEEEcCCC
Confidence 999999988 5454443 22222110 1223446544 444454 35689999998 43 478988876554
Q ss_pred -CCCCCCHHHHHHHHHHc-CCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeC
Q 018300 262 -YPRDFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKK 328 (358)
Q Consensus 262 -~~~~~dl~~I~~ia~e~-g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~ 328 (358)
+|...|+++|.++|+++ |+++++|++|+.|.. +.++..+|++++|+||+|+||.| |+++.++
T Consensus 142 ptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~-----~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~ 206 (362)
T 3ffr_A 142 SSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYP-----KFDWTKIDSVFFSVQKCFGLPAGLGVWILND 206 (362)
T ss_dssp TTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSS-----CCCTTSCSEEEEETTSTTCCCSCCEEEEEEH
T ss_pred CcceeCCHHHHHHHHHhCCCCEEEEecccccCCc-----ccChhHCcEEEEecccccCCCCceEEEEECH
Confidence 46689999999999999 999999999986642 22233589999999999987777 7877776
No 99
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.72 E-value=1.3e-16 Score=155.02 Aligned_cols=212 Identities=15% Similarity=0.175 Sum_probs=142.1
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCCH
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS 178 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~~SGt 178 (358)
.-+++..+++ .+++.|.+++...+.+. ..+|+. + ..++++.+.+++.+.+| ++.+ ..+++++|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~l~~~la~~l~~~~g~~~~~~---~v~~t~g~~ 99 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYTG-----P---TEEYKKTVKKWMKDRHQWDIQTD---WIINTAGVV 99 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSBC-----C---CHHHHHHHHHHHHHHHCCCCCGG---GEEEESSHH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCCC-----C---cHHHHHHHHHHHHHHhCCCCChh---hEEEcCCHH
Confidence 3455554444 35889999998877532 123322 2 34677777777777778 4443 224444557
Q ss_pred HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC--CCCCHHHHHHHhhhcCCeEEE
Q 018300 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKLII 256 (358)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~iD~d~le~~i~~~~~klIi 256 (358)
+|+..++.++++|||+|++.++.|.++.. .+...|. +++.+++++++ ..+|+++|++.++..++++|+
T Consensus 100 ~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~ 169 (399)
T 1c7n_A 100 PAVFNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQER--KIIECELLEKDGYYTIDFQKLEKLSKDKNNKALL 169 (399)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTC--EEEECCCEEETTEEECCHHHHHHHHTCTTEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCC--EEEecccccCCCCEEEcHHHHHHHhccCCCcEEE
Confidence 79999999999999999999886665421 2334565 44555554222 258999999988745788888
Q ss_pred EcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-------CCcEEEEcCcCcC--ccCcEE
Q 018300 257 AGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRGG 322 (358)
Q Consensus 257 ~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-------gaDiv~~S~hK~L--~Gp~GG 322 (358)
+..+++ |...+ +++|.++|+++|+++++|++|+.. ...+..+.++. +.++++.|+||++ +|.+.|
T Consensus 170 ~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 248 (399)
T 1c7n_A 170 FCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDL-IMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMS 248 (399)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTC-BCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCE
T ss_pred EcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCcccHHHcCccccCcEEEEEeChhhccccchheE
Confidence 765555 45667 899999999999999999999843 33332111221 2358899999997 566779
Q ss_pred EEEEeCCCCchhHHHHHHhh
Q 018300 323 MIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~ 342 (358)
+++++++ ++.+++..
T Consensus 249 ~~~~~~~-----~~~~~l~~ 263 (399)
T 1c7n_A 249 NIIIKNP-----DIRERFTK 263 (399)
T ss_dssp EEECCCH-----HHHHHHHH
T ss_pred EEEECCH-----HHHHHHHH
Confidence 9998754 46565544
No 100
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.71 E-value=8.3e-17 Score=158.83 Aligned_cols=175 Identities=19% Similarity=0.160 Sum_probs=125.4
Q ss_pred CCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCccccccccc
Q 018300 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 133 G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (358)
||.+.|+ +++...++|+ ++++++|.+. .+.++||+.|+.+ +.++++|||+|++.++.|++......
T Consensus 58 ~~~y~r~--~~p~~~~l~~----~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~-- 123 (400)
T 3nmy_A 58 GFEYSRT--HNPTRFAYER----CVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFE-- 123 (400)
T ss_dssp SCCBTTT--CCHHHHHHHH----HHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHH--
T ss_pred CcccccC--CCHHHHHHHH----HHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHH--
Confidence 4555454 5666666655 4788999874 4678899999988 56789999999999887765432100
Q ss_pred chhc-cccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEecccc
Q 018300 213 PKRR-VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHI 289 (358)
Q Consensus 213 ~~~~-~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~ 289 (358)
.. ....|. ++.+++. .|++++++.+++ ++++|++..+++ |...|+++|+++|+++|+++++|++|+
T Consensus 124 --~~~~~~~g~--~~~~v~~------~d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~ 192 (400)
T 3nmy_A 124 --RVRRRTAGL--DFSFVDL------TDPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFA 192 (400)
T ss_dssp --HTHHHHHCC--EEEEECT------TSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred --HhhHhhcCe--EEEEECC------CCHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCc
Confidence 00 112354 4444333 288999998864 789998876654 567899999999999999999999998
Q ss_pred ccccccCCccCCCC-CCcEEEEcCcCcCccC---cEE-EEEEeCCCCchhHHHHHHhh
Q 018300 290 SGLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGG-MIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 290 ~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp---~GG-~I~~~~~~~~~~~~~~~i~~ 342 (358)
.+.. ..+++ ++|++++|++|+|.|| .|| +++.+++ ++.+++..
T Consensus 193 ~~~~-----~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~-----~~~~~l~~ 240 (400)
T 3nmy_A 193 SPML-----QRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNA-----ELAEQMAF 240 (400)
T ss_dssp HHHH-----CCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCH-----HHHHHHHH
T ss_pred cccc-----CChhhcCCcEEEecCccccCCCCCcceeEEEEeCCH-----HHHHHHHH
Confidence 6543 23555 8999999999999887 578 6776664 56555543
No 101
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.71 E-value=4.4e-17 Score=159.75 Aligned_cols=238 Identities=13% Similarity=0.071 Sum_probs=145.7
Q ss_pred ccccccChHHHHHHHHHHHHh--hhcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQ--FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~--~~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~ 156 (358)
+++..+.++.+..+.+...+. +.-+++..+++. .++.|++++...+......+|+.. .|. .++++.+.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~---~~lr~~ia~~ 97 (404)
T 2o1b_A 24 NKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAF---HGK---EAFKQAIVDF 97 (404)
T ss_dssp HHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCT---TCC---HHHHHHHHHH
T ss_pred hHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCC---CCC---HHHHHHHHHH
Confidence 344444444443333322211 124566544443 578999999877643211233321 122 3566666677
Q ss_pred HHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC
Q 018300 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (358)
Q Consensus 157 la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (358)
+++.+|.+.+.....+++++|++|+..++.++++|||+|++.++.|.++.. .+...|. +++.++.++++.
T Consensus 98 ~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~ 167 (404)
T 2o1b_A 98 YQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLA--------GVLLADG--KPVPLNLEPPHY 167 (404)
T ss_dssp HHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHH--------HHHHTTC--EEEEEECCTTTC
T ss_pred HHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHCCC--EEEEeccCcccC
Confidence 777779752100012444455679999999999999999999887665421 2334565 444555654334
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCC--CC---CCc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCD 306 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p--l~---gaD 306 (358)
.+|+++|++.+.. ++++|++..+++ |...+ +++|.++|+++|+++++|++|+.+ ...+...+. ++ +.+
T Consensus 168 ~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~ 245 (404)
T 2o1b_A 168 LPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF-GFDAKNPSILASENGKDVA 245 (404)
T ss_dssp CCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTC-BSSSCCCCGGGSTTHHHHE
T ss_pred cCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhc-ccCCCCCChhhcCCCCCCE
Confidence 6899999888753 678888865555 44554 788999999999999999999853 332321111 21 346
Q ss_pred EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 307 iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+++.|+||+| +|.+.|++++++ ++.+++..
T Consensus 246 i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~l~~ 277 (404)
T 2o1b_A 246 IEIYSLSKGYNMSGFRVGFAVGNK------DMIQALKK 277 (404)
T ss_dssp EEEEESTTTTTCGGGCCEEEEECH------HHHHHHHH
T ss_pred EEEEecchhccCchhheEeEecCH------HHHHHHHH
Confidence 8999999998 466779999876 45555543
No 102
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.71 E-value=7.3e-17 Score=157.28 Aligned_cols=232 Identities=13% Similarity=0.013 Sum_probs=145.6
Q ss_pred ccccccChHHHHHHHHHHHHhhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la 158 (358)
+++..+++..+..+.+.. ...+-++|-..++ .+++.|++++...+.+....+|+.. .|. .++++.+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~---~~l~~~la~~~~ 75 (410)
T 3e2y_A 3 KRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG---FGH---PALVKALSCLYG 75 (410)
T ss_dssp GGGTTCCCCHHHHTTTTT-TSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCT---TCC---HHHHHHHHHHHH
T ss_pred hhhccCCccHHHHHHHHh-cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCC---CCh---HHHHHHHHHHHH
Confidence 345555555554332211 1124455543333 4789999999887765433344431 122 356666667777
Q ss_pred HHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec------
Q 018300 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD------ 232 (358)
Q Consensus 159 ~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~------ 232 (358)
+.+|.+...-...+++++|++|+..++.++++|||+|++.++.|.++.. .+...|..+..++++..
T Consensus 76 ~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~g~~ 147 (410)
T 3e2y_A 76 KIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEP--------MVRMAGAVPVFIPLRSKPTDGMK 147 (410)
T ss_dssp HHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEECCCCSSC
T ss_pred HHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEecccccccccc
Confidence 7777543100012444456689999999999999999998876655421 23445654444443321
Q ss_pred --CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCC---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--
Q 018300 233 --ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-- 303 (358)
Q Consensus 233 --~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-- 303 (358)
.+++.+|++++++.+.. ++++|++..++++ ... ++++|+++|+++|+++++|++|+ ++...+..+.++.
T Consensus 148 ~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~ 225 (410)
T 3e2y_A 148 WTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYE-WLVYTGHTHVKIATL 225 (410)
T ss_dssp CBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGS
T ss_pred ccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhh-hcccCCCCCCCHHHc
Confidence 12346899999998764 7888888666654 343 68999999999999999999987 3343332221221
Q ss_pred ----CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 304 ----YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 304 ----gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+.++++.|++|++ +|.+.|+++++++
T Consensus 226 ~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~ 257 (410)
T 3e2y_A 226 PGMWERTITIGSAGKTFSVTGWKLGWSIGPAH 257 (410)
T ss_dssp TTCGGGEEEEEEHHHHSSCGGGCCEEEECCHH
T ss_pred CCccCeEEEEecchhhcCCCCceEEEEEECHH
Confidence 2348889999997 4677899998773
No 103
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.71 E-value=3.3e-16 Score=158.29 Aligned_cols=174 Identities=14% Similarity=0.083 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCCCHHHHHHHHHHhcc--------CC-----C-EEEecCCCCCcccc
Q 018300 144 EYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAILK--------PH-----D-RIMGLDLPHGGHLS 207 (358)
Q Consensus 144 ~~~~~lE~~~~~~la~lfg~~--~~~~~v~V~~~SGt~A~~~a~~all~--------pG-----D-~Vl~~~~~~ggh~s 207 (358)
+...++|+.+++++++++|.+ .. ..+++.+||+||..++.++.. +| | +|++++..|.++.
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~~---~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~- 203 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKDG---DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK- 203 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSC---EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH-
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCC---CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH-
Confidence 556789998999999999997 32 235566778899999888742 67 7 7888776554321
Q ss_pred cccccchhccccCCceE-EEEeceecCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCC--CCCCCCHHHHHHHHHHcC
Q 018300 208 HGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASA--YPRDFDYPRMRQIADAVG 279 (358)
Q Consensus 208 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~iD~d~le~~i~~~-----~~klIi~~~s~--~~~~~dl~~I~~ia~e~g 279 (358)
+.+...|... +++.++++ +++.+|+++|++.+++. +|++|++...+ +|...|+++|.++|+++|
T Consensus 204 -------~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g 275 (504)
T 2okj_A 204 -------KAGAALGFGTDNVILIKCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYN 275 (504)
T ss_dssp -------HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHT
T ss_pred -------HHHHHcCCCcccEEEEecC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcC
Confidence 1223334311 23344455 36799999999988652 47888776544 467889999999999999
Q ss_pred CEEEEeccccccccccCCccCCC---CCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 280 ALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 280 ~~livD~Ah~~Gl~~~g~~~~pl---~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+++++|++|+.+..........+ .++|++++++||++.+|.+ |+++++++
T Consensus 276 ~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~ 329 (504)
T 2okj_A 276 LWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 329 (504)
T ss_dssp CEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred CEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECH
Confidence 99999999987765322221222 3789999999999988864 88988875
No 104
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.71 E-value=6.8e-17 Score=153.39 Aligned_cols=165 Identities=15% Similarity=0.136 Sum_probs=123.4
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhc-cccCCceEEEEecee
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGTSIYFESMPYRL 231 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~-~~~~g~~~~~~~~~~ 231 (358)
.++++++++|.+. .+.++||++|+..++.++++|||+|+++++.|.++.... .. ....|. ++..++.
T Consensus 3 l~~~la~~~g~~~-----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----~~~~~~~g~--~~~~~~~ 70 (331)
T 1pff_A 3 LEGKIAKLEHAEA-----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALF-----EHQLRKFGV--EVDFIDM 70 (331)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHH-----HTHHHHTTC--EEEEECT
T ss_pred HHHHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHH-----HHHHHhcCC--EEEEeCC
Confidence 3456889999873 477899999999999999999999999998776643210 00 123454 3344322
Q ss_pred cCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CCCCCCHHHHHHHHHH-cCCEEEEeccccccccccCCccCCCC-CCcE
Q 018300 232 DESTGLVDYDMLEKTAILFRPKLIIAGASA--YPRDFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPFK-YCDV 307 (358)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~~~~dl~~I~~ia~e-~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDi 307 (358)
+|++++++.+++ ++++|++..++ +|...|+++|.++|++ +|+++++|++|+.|... .+++ ++|+
T Consensus 71 ------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~-----~~~~~~~d~ 138 (331)
T 1pff_A 71 ------AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILT-----NPLDLGVDI 138 (331)
T ss_dssp ------TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHC-----CGGGGTCSE
T ss_pred ------CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccC-----ChhhcCCcE
Confidence 478899988764 68888886655 4568899999999999 99999999999877542 2345 7999
Q ss_pred EEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhhccCC
Q 018300 308 VTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFP 346 (358)
Q Consensus 308 v~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~~~f~ 346 (358)
+++|+||+|++|. +|+++++++ ++.+++......
T Consensus 139 ~~~s~~K~~~~~~~r~~G~~~~~~~-----~~~~~l~~~~~~ 175 (331)
T 1pff_A 139 VVHSATKYINGHTDVVAGLVCSRAD-----IIAKVKSQGIKD 175 (331)
T ss_dssp EEEETTTTTSSSSSCCCEEEEECHH-----HHHHHHHTCCCC
T ss_pred EEEECccccCCCCCceEEEEEeCcH-----HHHHHHHHHHHh
Confidence 9999999998764 789998874 566777665443
No 105
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.70 E-value=1.7e-16 Score=157.29 Aligned_cols=187 Identities=19% Similarity=0.227 Sum_probs=136.3
Q ss_pred cCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh-
Q 018300 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (358)
Q Consensus 110 s~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al- 188 (358)
+.+.+++.+++++...+...+ |+.+ +...+ +++.+++++|.+. .++++|||+|+..++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~~--------~~~~-~~~~~----l~~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDGW--------LTTG-RFNDA----FEKKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHCC--------CBSC-HHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC--------cCCC-hHHHH----HHHHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 455678899999987765321 2233 22333 4556889999874 477899999999999998
Q ss_pred --------ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 189 --------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 189 --------l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
+++||+|+++++.|.++.. .+...|. +++.++++++++.+|++++++.+.. ++++|++..
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~- 166 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVN--------PTIQNGL--IPVFVDVDIPTYNVNASLIEAAVSD-KTKAIMIAH- 166 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHH--------HHHHTTC--EEEECCEETTTTEECGGGHHHHCCT-TEEEEEEEC-
T ss_pred hcccccccCCCcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEeccCccCCcCHHHHHHhcCC-CCeEEEEeC-
Confidence 8999999999887665432 2234565 5566667755678999999998864 688887743
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCc--CcCccCcEEEEEEeCC
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKD 329 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~h--K~L~Gp~GG~I~~~~~ 329 (358)
..+...|+++|.++|+++|+++++|++|+.|....+ ..+. .+|++++|++ |.|+|++||+++++++
T Consensus 167 ~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~---~~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~ 235 (437)
T 3bb8_A 167 TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDG---KMAGTFGDIGTVSFYPAKHITMGEGGAVFTQSA 235 (437)
T ss_dssp GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETT---EETTSSSSEEEEECSTTSSSCCSSCEEEEESCH
T ss_pred CCCChhcHHHHHHHHHHcCCEEEEECccccCceECC---eecccccCEEEEECcCCcCCCCCCeEEEEeCCH
Confidence 334458999999999999999999999998865422 1122 3788777753 4478889999999864
No 106
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.70 E-value=6e-17 Score=157.62 Aligned_cols=178 Identities=12% Similarity=0.094 Sum_probs=122.2
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccC
Q 018300 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (358)
Q Consensus 141 ~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (358)
.+.++.+.++ .+++++++++|++. ..+++.|||.|+.+++. +++|||+|++++..|.+ +.+. ......
T Consensus 29 ~~~~~~~~~~-~~~~~l~~~~~~~~----~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~---~~~~---~~~~~~ 96 (379)
T 3ke3_A 29 MSKAFQEVMN-DLLSNLKTVYNAEA----AVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFS---YRWT---QILEKG 96 (379)
T ss_dssp TSHHHHHHHH-HHHHHHHHHHTCSE----EEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHH---HHHH---HHHHHH
T ss_pred CCHHHHHHHH-HHHHHHHHHhCCCC----EEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchh---HHHH---HHHHHh
Confidence 3555554444 47889999999973 34556789999999875 46799999998754322 2110 111222
Q ss_pred CceEEEEeceecCC--------CCCCCHHHHHHHhhhcCCeEEEEcCC--CCCCCCC---HHHHHHHHHHcCCEEEEecc
Q 018300 221 SIYFESMPYRLDES--------TGLVDYDMLEKTAILFRPKLIIAGAS--AYPRDFD---YPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 221 g~~~~~~~~~~~~~--------~~~iD~d~le~~i~~~~~klIi~~~s--~~~~~~d---l~~I~~ia~e~g~~livD~A 287 (358)
|..+++..++.+.. .+.+|++++++.++..++++|++... .+|...| +++|.++|+++|+++++|++
T Consensus 97 g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~ 176 (379)
T 3ke3_A 97 KFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCI 176 (379)
T ss_dssp CCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 32223333333210 12689999999986557888877543 3567788 99999999999999999999
Q ss_pred ccccccccCCccCCCC--CCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHHHHHhh
Q 018300 288 HISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 288 h~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~~~i~~ 342 (358)
|+ |.. +..++ ++|++++|+||+|.||.| |+++.++ ++.+++..
T Consensus 177 ~~-g~~-----~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~~~l~~ 222 (379)
T 3ke3_A 177 AS-GCV-----WLDMKELGIDVLISAPQKGWSSTPCAGLVMLSA------AAIKKVES 222 (379)
T ss_dssp TC-TTC-----CCCHHHHTCSEEEECTTTTTCSCCCEEEEEECH------HHHHHHHT
T ss_pred cc-CCc-----cccccccCCCEEEecchhhcCCCCceEEEEECH------HHHHhhhc
Confidence 87 632 22233 899999999999998876 7888776 56566654
No 107
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.70 E-value=4.6e-16 Score=147.46 Aligned_cols=208 Identities=16% Similarity=0.177 Sum_probs=137.6
Q ss_pred HHHHHHhhhcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceE
Q 018300 95 TKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNV 172 (358)
Q Consensus 95 ~~e~~~~~~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V 172 (358)
++++...+..|.|-..+|+ ++|.|++++...+... .+||. +...+ .++.+++++|++++ +|
T Consensus 9 ~~~~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~----lr~~la~~~~~~~~----~i 71 (337)
T 3p1t_A 9 DTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARI--NRYPF-------DAEPR----VMRKLAEHFSCPED----NL 71 (337)
T ss_dssp -----CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGT--TSCCT-------THHHH----HHHHHHHHHTSCGG----GE
T ss_pred cccccCCCCceEeeCCCCCCCCCHHHHHHHHHhhhhh--ccCCC-------CchHH----HHHHHHHHhCcCHH----HE
Confidence 3444444566777666664 5899999998765431 23332 22223 45568889999764 35
Q ss_pred EeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcC
Q 018300 173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR 251 (358)
Q Consensus 173 ~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~ 251 (358)
.+++|+ +++..++.++ |||+|++.++.|.++.. .+...|. +++++++++ ++.+|++++++. .+
T Consensus 72 ~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~---~~ 135 (337)
T 3p1t_A 72 MLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA--------RIAVSGL--RHFEIGLTD-DLLLDPNDLAQV---SR 135 (337)
T ss_dssp EEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHH--------HHTTSCC--EEEEECBCT-TSSBCHHHHTTC---CT
T ss_pred EEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHH--------HHHHcCC--EEEEecCCC-CCCCCHHHHHhh---cC
Confidence 556655 5888888776 99999999876655421 2344565 455555653 468999999875 36
Q ss_pred CeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcC--ccCcEEEEEEe
Q 018300 252 PKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFFK 327 (358)
Q Consensus 252 ~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L--~Gp~GG~I~~~ 327 (358)
+++|++..+++ |...|++++.++|+++++ +++|++|. ++...+.......+.++++.|+||++ +|.+.|+++.+
T Consensus 136 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~-~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 213 (337)
T 3p1t_A 136 DDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGP 213 (337)
T ss_dssp TEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTG-GGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECC
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCCh-hhccccccccccCCCEEEEeeCchhccCcchheEEEEeC
Confidence 78888766654 568999999999999997 56699986 33322211111125679999999998 47788999987
Q ss_pred CCCCchhHHHHHHhhc
Q 018300 328 KDPVLGVELESAINNA 343 (358)
Q Consensus 328 ~~~~~~~~~~~~i~~~ 343 (358)
+ ++.+++...
T Consensus 214 ~------~~~~~l~~~ 223 (337)
T 3p1t_A 214 S------ELIAAMKRK 223 (337)
T ss_dssp H------HHHHHHHTT
T ss_pred H------HHHHHHHhh
Confidence 6 566666554
No 108
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.70 E-value=1.7e-16 Score=155.14 Aligned_cols=206 Identities=17% Similarity=0.040 Sum_probs=135.4
Q ss_pred hcccccccCC-----CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC
Q 018300 103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (358)
Q Consensus 103 ~~i~lias~n-----~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG 177 (358)
..+++...++ ..++.+.+++...+.+.. .+|+. ..|. .++++.+.+++.+.+|...+ ....+++++|
T Consensus 39 ~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~---~~g~---~~l~~~la~~l~~~~g~~~~-~~~v~~t~g~ 110 (406)
T 1xi9_A 39 KVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NYYGD---SEGL---PELRKAIVEREKRKNGVDIT-PDDVRVTAAV 110 (406)
T ss_dssp CCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CSCCC---TTCC---HHHHHHHHHHHHHHHCCCCC-GGGEEEESHH
T ss_pred CEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCc---HHHHHHHHHHHHHhcCCCCC-HHHEEEcCCh
Confidence 3455554444 457899999987775422 23332 1122 35777777777776664321 1123444556
Q ss_pred HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-CCCCCCHHHHHHHhhhcCCeEEE
Q 018300 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLII 256 (358)
Q Consensus 178 t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~iD~d~le~~i~~~~~klIi 256 (358)
++|+..++.++++|||+|++.++.|.++.. .+...|.. ++.+++++ ++..+|+++|++.++. ++++|+
T Consensus 111 ~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~ 179 (406)
T 1xi9_A 111 TEALQLIFGALLDPGDEILVPGPSYPPYTG--------LVKFYGGK--PVEYRTIEEEDWQPDIDDIRKKITD-RTKAIA 179 (406)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCE--EEEEEEEGGGTSEECHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCccHHH--------HHHHcCCE--EEEeecCCCcCCcCCHHHHHHhhCc-CceEEE
Confidence 789999999999999999999886654321 23345654 44445553 2346899999998865 688887
Q ss_pred EcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccC--CC-CCC-cEEEEcCcCcCc--cCcEEEEE
Q 018300 257 AGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF-KYC-DVVTTTTHKSLR--GPRGGMIF 325 (358)
Q Consensus 257 ~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--pl-~ga-Div~~S~hK~L~--Gp~GG~I~ 325 (358)
+..+++ |...+ +++|.++|+++|+++++|++|+.+.. ++..+. .+ .+. |++++|+||+++ |.+.|+++
T Consensus 180 i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (406)
T 1xi9_A 180 VINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMY 258 (406)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEE
T ss_pred EECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEE
Confidence 765554 44554 89999999999999999999985432 221111 11 245 789999999984 66678888
Q ss_pred --EeC
Q 018300 326 --FKK 328 (358)
Q Consensus 326 --~~~ 328 (358)
.++
T Consensus 259 ~~~~~ 263 (406)
T 1xi9_A 259 FVDPE 263 (406)
T ss_dssp EECTT
T ss_pred EecCc
Confidence 665
No 109
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.70 E-value=2.9e-17 Score=157.37 Aligned_cols=207 Identities=12% Similarity=0.080 Sum_probs=136.0
Q ss_pred HhhhcccccccCCCC--cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC
Q 018300 100 RQFKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (358)
Q Consensus 100 ~~~~~i~lias~n~~--s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG 177 (358)
++...+.+.+++|+. +|.|++++...+... .|+..+...+ .++++++++|.+. .++++||
T Consensus 11 ~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~~---------~~~~~~~~~~----l~~~la~~~~~~~-----~i~~~~g 72 (359)
T 3pj0_A 11 QKTPYKLGGNGPRNVGVLTEALQNIDDNLESD---------IYGNGAVIED----FETKIAKILGKQS-----AVFFPSG 72 (359)
T ss_dssp HTCSEESSSSSCCBHHHHHHHTTTSCTTCBCC---------BTTBSHHHHH----HHHHHHHHHTCSE-----EEEESCH
T ss_pred HhcchhhcCCCccccCCCHHHHHHHHhhcccC---------cccCCHHHHH----HHHHHHHHhCCCc-----EEEeCCH
Confidence 444666777888887 889999987632211 1222333333 4556888999876 3666899
Q ss_pred HHHHHHHHHHhccCCCE--EEecCCCCCcccccccccchhcc-ccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeE
Q 018300 178 SPANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (358)
Q Consensus 178 t~A~~~a~~all~pGD~--Vl~~~~~~ggh~s~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~kl 254 (358)
+.|+..++.+++++||+ |++.++. |..... ...+ ...|. ++++++. +++.+|++++++. ..++++
T Consensus 73 ~~a~~~a~~~~~~~g~~~vvi~~~~~---~~~~~~---~~~~~~~~g~--~~~~v~~--~~~~~d~~~l~~~--~~~~~~ 140 (359)
T 3pj0_A 73 TMAQQIALRIWADRKENRRVAYHPLS---HLEIHE---QDGLKELQQI--TPLLLGT--ANQLLTIDDIKSL--REPVSS 140 (359)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECTTC---HHHHSS---TTHHHHHHCC--EEEECSC--TTSCCCHHHHHTC--SSCCSE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEeccc---eeeehh---cchHHHhcCc--eEEecCC--cCCCcCHHHHHhc--cCCceE
Confidence 99999999999999987 5544332 211110 0011 23354 4555544 3578999999987 357899
Q ss_pred EEEcCCCC---CCCCCHHH---HHHHHHHcCCEEEEecccccccc-ccCCccCCC-CCCcEEEEcCcCcCccCcEEEEEE
Q 018300 255 IIAGASAY---PRDFDYPR---MRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFF 326 (358)
Q Consensus 255 Ii~~~s~~---~~~~dl~~---I~~ia~e~g~~livD~Ah~~Gl~-~~g~~~~pl-~gaDiv~~S~hK~L~Gp~GG~I~~ 326 (358)
|++..+++ |...+.++ |.++|+++|++|++|++|..+.. ..+..+.++ .++|+++.|+||+|.+|.||+++.
T Consensus 141 v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~ 220 (359)
T 3pj0_A 141 VLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAG 220 (359)
T ss_dssp EEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEE
T ss_pred EEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEEC
Confidence 98865542 45666555 59999999999999999875532 112111122 278999999999999997878777
Q ss_pred eCCCCchhHHHHHHhh
Q 018300 327 KKDPVLGVELESAINN 342 (358)
Q Consensus 327 ~~~~~~~~~~~~~i~~ 342 (358)
++ ++.+++..
T Consensus 221 ~~------~l~~~~~~ 230 (359)
T 3pj0_A 221 ND------DFVQEAKI 230 (359)
T ss_dssp CH------HHHHHHHH
T ss_pred CH------HHHHHHHH
Confidence 76 56555543
No 110
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.70 E-value=2.4e-18 Score=169.37 Aligned_cols=201 Identities=12% Similarity=0.080 Sum_probs=130.1
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCC---cCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eCCCHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGK---RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSP 179 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~---r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~-~~SGt~ 179 (358)
...+.|++..+++.|+++|...+.+.+. +|.+ .++.+.++.+.+++ +|+.++++||++..+ -.++ +.+||.
T Consensus 28 ~yl~~agpt~~p~~V~~a~~~~~~~~~~--n~~s~~~~~h~~~~~~~~~~~-ar~~la~ll~~~~~~--evif~t~~~T~ 102 (386)
T 3qm2_A 28 VFNFSSGPAMLPAEVLKLAQQELCDWHG--LGTSVMEISHRGKEFIQVAEE-AEQDFRDLLNIPSNY--KVLFCHGGGRG 102 (386)
T ss_dssp CEECCSSSCCCCHHHHHHHTCC-------------------------CCHH-HHHHHHHHHTCCTTE--EEEEEESCTTH
T ss_pred CccccCCCCCCCHHHHHHHHHHHHhccc--cCccccccCCCCHHHHHHHHH-HHHHHHHHhCCCCCc--eEEEEcCCchH
Confidence 3456699999999999999988766443 3322 12234455555665 799999999996421 1234 358899
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCC-CCHHHHHHHhhhcCCeEEEEc
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-VDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-iD~d~le~~i~~~~~klIi~~ 258 (358)
++.+++.+++++||+|++... ++++|.++. .....| .++.++.+. ++.+. +|++++++.+.+ ++++|.+.
T Consensus 103 a~n~ai~~l~~~gd~v~~~~~---~~~~~~~~~---~a~~~G-~v~~v~~~~-~~~G~~~~~~~~~~~l~~-~t~lV~~~ 173 (386)
T 3qm2_A 103 QFAGVPLNLLGDKTTADYVDA---GYWAASAIK---EAKKYC-APQIIDAKI-TVDGKRAVKPMREWQLSD-NAAYLHYC 173 (386)
T ss_dssp HHHHHHHHHCTTCCEEEEEES---SHHHHHHHH---HHTTTS-EEEEEECEE-EETTEEEECCGGGCCCCT-TCSCEEEC
T ss_pred HHHHHHHhccCCCCeEEEEeC---CHHHHHHHH---HHHHhC-CeEEEecCc-ccCCCCCCchHHHhhcCC-CCcEEEEE
Confidence 999999999999999876543 455554321 223446 555555431 11343 777777776653 78888765
Q ss_pred CCC--CCCC-CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 259 ASA--YPRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 259 ~s~--~~~~-~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+.. +|.. .|+++|. +|+++++|++|++|.. |..++..|++++|.||++ ||.| |+++.+++
T Consensus 174 h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~-----pidv~~~~~~~~s~hK~l-GP~G~g~l~v~~~ 237 (386)
T 3qm2_A 174 PNETIDGIAIDETPDFG-----PEVVVTADFSSTILSA-----PLDVSRYGVIYAGAQKNI-GPAGLTLVIVRED 237 (386)
T ss_dssp SEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSS-----CCCGGGCSEEEEETTTTT-CCTTEEEEEEEGG
T ss_pred CCcCCcCEecCchhhhc-----CCCEEEEEcccccCCC-----CCCccccCEEEEeccccc-CCCccEEEEECHH
Confidence 433 4775 7888875 7999999999998864 333335578889999999 7998 89998876
No 111
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.70 E-value=1.2e-15 Score=148.63 Aligned_cols=235 Identities=17% Similarity=0.074 Sum_probs=145.5
Q ss_pred hcccccccChHHHHHHHHHHHH--hh--hcccccccC----CCCcHHHHHHHhhhhhccc--CCCCCCCcCCCCcHHHHH
Q 018300 79 VDYSLGEADPEVCEIITKEKER--QF--KSLELIASE----NFTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDE 148 (358)
Q Consensus 79 ~~~~l~~~d~~~~~~i~~e~~~--~~--~~i~lias~----n~~s~~V~~al~~~l~~~~--~~G~pg~r~~~G~~~~~~ 148 (358)
+++++..+.+..+..+.+...+ .. .-+++-.+. .+.++.+.+++...+.... .. |+. ..| ..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~---~~~---~~~ 79 (407)
T 2zc0_A 7 LAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTP---ANG---IPE 79 (407)
T ss_dssp SCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCC---TTC---CHH
T ss_pred hhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCC---CCC---CHH
Confidence 3455555555544333332221 22 345553221 2356889999887765421 11 221 112 235
Q ss_pred HHHHHHHHHHHHcCC--CCCCCcceEEeC-CCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEE
Q 018300 149 LETLCQKRALAAFNL--DENKWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (358)
Q Consensus 149 lE~~~~~~la~lfg~--~~~~~~v~V~~~-SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (358)
+++.+.+++.+.+|. +.+ +|+++ +|++|+..++.++++|||+|++.++.|.++. ..+...|..
T Consensus 80 l~~~la~~~~~~~g~~~~~~----~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~--------~~~~~~g~~-- 145 (407)
T 2zc0_A 80 LREELAAFLKKYDHLEVSPE----NIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTL--------LAFEQLGAK-- 145 (407)
T ss_dssp HHHHHHHHHHHHSCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTTCE--
T ss_pred HHHHHHHHHHHhcCCCCCcc----eEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCCE--
Confidence 777666666666684 332 34444 4578999999999999999999887655432 123445654
Q ss_pred EEeceecCCCCCCCHHHHHHHhh----h-cCCeEEE-EcCCCC--CCCCCHH---HHHHHHHHcCCEEEEeccccccccc
Q 018300 226 SMPYRLDESTGLVDYDMLEKTAI----L-FRPKLII-AGASAY--PRDFDYP---RMRQIADAVGALLMMDMAHISGLVA 294 (358)
Q Consensus 226 ~~~~~~~~~~~~iD~d~le~~i~----~-~~~klIi-~~~s~~--~~~~dl~---~I~~ia~e~g~~livD~Ah~~Gl~~ 294 (358)
++.++.++ ++ +|+++|++.++ . .++++|+ +..+++ |...+.+ +|.++|+++|+++++|++|+.+ ..
T Consensus 146 ~~~v~~~~-~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~ 222 (407)
T 2zc0_A 146 IEGVPVDN-DG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFM-RY 222 (407)
T ss_dssp EEEEEEET-TE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTS-BS
T ss_pred EEEcccCC-CC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCccc-cc
Confidence 44555554 33 89999999886 4 2678874 444444 5677765 8999999999999999998854 32
Q ss_pred cCCccCCC---C--CCcEEEEcCcCcCc-cCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 295 ASVVADPF---K--YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 295 ~g~~~~pl---~--gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
.+..+.++ + +.++++.|+||+++ |.++|++++++ ++.+++...
T Consensus 223 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~------~~~~~~~~~ 271 (407)
T 2zc0_A 223 EGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEG------EILKKVLMQ 271 (407)
T ss_dssp SCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCH------HHHHHHHHH
T ss_pred CCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCH------HHHHHHHHH
Confidence 22211112 2 34578899999986 44789999875 566666553
No 112
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.70 E-value=1.1e-16 Score=152.39 Aligned_cols=191 Identities=15% Similarity=0.115 Sum_probs=128.0
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
..++.|++++...+.. +.. .|+..+ +.+.+++++++++| ... ..+++++|++|+..++.++++||
T Consensus 19 ~~~~~v~~a~~~~~~~-~~~------~~~~~~----~~~~l~~~la~~~g-~~~---~v~~~~~gt~a~~~al~~~~~~g 83 (356)
T 1v72_A 19 GASPEVAQALVKHSSG-QAG------PYGTDE----LTAQVKRKFCEIFE-RDV---EVFLVPTGTAANALCLSAMTPPW 83 (356)
T ss_dssp CCCHHHHHHHHHTTSS-CCC------STTCSH----HHHHHHHHHHHHHT-SCC---EEEEESCHHHHHHHHHHTSCCTT
T ss_pred CCCHHHHHHHHhhccC-ccc------ccccch----HHHHHHHHHHHHhC-CCC---cEEEeCCccHHHHHHHHHhcCCC
Confidence 4689999999876421 111 122223 33446777899999 331 13566788999999999999999
Q ss_pred CEEEecCCCCCcccccccccchhccccC--CceEEEEeceecCCCCCCCHHHHHH-Hhhhc------CCeEEEEcCC-CC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEK-TAILF------RPKLIIAGAS-AY 262 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~iD~d~le~-~i~~~------~~klIi~~~s-~~ 262 (358)
|+|++.++.|.+....+ .+... |. ++++++.+ ++.+|+++|++ .+++. ++++|++..+ ++
T Consensus 84 d~vi~~~~~~~~~~~~~------~~~~~~~g~--~~~~v~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~t 153 (356)
T 1v72_A 84 GNIYCHPASHINNDECG------APEFFSNGA--KLMTVDGP--AAKLDIVRLRERTREKVGDVHTTQPACVSITQATEV 153 (356)
T ss_dssp EEEEECTTSHHHHSSTT------HHHHHTTSC--EEEECCCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTT
T ss_pred CEEEEcCccchhhhhch------HHHHHhCCc--EEEEecCC--CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCCC
Confidence 99999887554432110 12233 55 44555554 36899999999 87642 5788877654 45
Q ss_pred CC---CCCHHHHHHHHHHcCCEEEEecccccccc-ccCCccCCC--C-CCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 263 PR---DFDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF--K-YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 263 ~~---~~dl~~I~~ia~e~g~~livD~Ah~~Gl~-~~g~~~~pl--~-gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
|. ..++++|.++|+++|+++++|++|..+.. ..+..+..+ + ++|++++|+||+ .+|.| |+++++++
T Consensus 154 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~~ 227 (356)
T 1v72_A 154 GSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNTS 227 (356)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSGG
T ss_pred CccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECHH
Confidence 66 34588999999999999999999874422 222222233 2 689999999999 66777 68877663
No 113
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.70 E-value=2.7e-16 Score=156.38 Aligned_cols=224 Identities=11% Similarity=0.103 Sum_probs=147.6
Q ss_pred cChHHHHHHHHHHHH--------hhhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHH
Q 018300 86 ADPEVCEIITKEKER--------QFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (358)
Q Consensus 86 ~d~~~~~~i~~e~~~--------~~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~ 155 (358)
+++..+..+.+.... ...-++|..++. .+++.|.+++...+......+|+. ..|.. ++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~~---~lr~~ia~ 106 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSP---TRGRP---SLINSLIK 106 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCC---TTCCH---HHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC---CCCCH---HHHHHHHH
Confidence 667777777665432 224456654332 367899999988765421223432 11322 56666666
Q ss_pred HHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-
Q 018300 156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES- 234 (358)
Q Consensus 156 ~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~- 234 (358)
++.+.+|.+.+ ....+++++|++|+..++.++++|||+|++.++.|.++.. .+...|.. ++.++++++
T Consensus 107 ~l~~~~g~~~~-~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~--~~~v~~~~~~ 175 (447)
T 3b46_A 107 LYSPIYNTELK-AENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIP--------NIELCGGK--VVYVPINPPK 175 (447)
T ss_dssp HHTTTTTSCCC-GGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCE--EEEEEEECCG
T ss_pred HHHHhcCCCCC-hhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHH--------HHHHcCCE--EEEEeCCCcc
Confidence 67666776431 1112344455789999999999999999999887665422 23455654 444445443
Q ss_pred ----------CCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCC---CHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 235 ----------TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 235 ----------~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
++.+|+++|++.+. .++++|++..+++| ... ++++|+++|+++|+++++|++|.. +...+..+
T Consensus 176 ~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~-~~~~g~~~ 253 (447)
T 3b46_A 176 ELDQRNTRGEEWTIDFEQFEKAIT-SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEH-LYFTDSFT 253 (447)
T ss_dssp GGGTSCBCSTTSEECHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCSSCCC
T ss_pred ccccccccccCcccCHHHHHHhhc-cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchh-cccCCCCc
Confidence 34689999999886 37888888766654 343 589999999999999999999874 33333111
Q ss_pred --CCC--C--CCcEEEEcCcCcC--ccCcEEEEEE-eC
Q 018300 300 --DPF--K--YCDVVTTTTHKSL--RGPRGGMIFF-KK 328 (358)
Q Consensus 300 --~pl--~--gaDiv~~S~hK~L--~Gp~GG~I~~-~~ 328 (358)
..+ + +.|+++.|+||++ +|.|.|++++ ++
T Consensus 254 ~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~ 291 (447)
T 3b46_A 254 RIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNA 291 (447)
T ss_dssp CGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCH
T ss_pred CHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCH
Confidence 123 1 6789999999998 4777899999 65
No 114
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.70 E-value=3.6e-17 Score=159.67 Aligned_cols=203 Identities=11% Similarity=0.060 Sum_probs=136.5
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCc---CCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEE--eCCC
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR---YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ--PLSG 177 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r---~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~--~~SG 177 (358)
+.+++.|++..+++.|+++|...+.+.+. ++.+. .+.+.++.+.+++ +|+.++++||++.. -+|. +.+|
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~--~~~s~~~~~hr~~~~~~~~~~-~r~~la~ll~~~~~---~~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQG--RGYSIMEISHRTKVFEEVHFG-AQEKAKKLYELNDD---YEVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGG--SSSCGGGSCSSSHHHHHHHHH-HHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhccc--CCceeeccCCCCHHHHHHHHH-HHHHHHHHhCCCCC---ceEEEEcCcH
Confidence 55688899999999999999988876543 33221 2335566666665 89999999999642 1344 4567
Q ss_pred HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCC-CCHHHHHHHhhhcCCeEEE
Q 018300 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-VDYDMLEKTAILFRPKLII 256 (358)
Q Consensus 178 t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-iD~d~le~~i~~~~~klIi 256 (358)
|.++.+++.+++ +||+++... .|+++|.+.. .....|..++.++ ++++... +++++ + +++ ++++|.
T Consensus 79 T~a~n~~~~~~~-~~~~~~~i~---~~~~~~~~~~---~a~~~G~~v~~~~--~~~~g~~~~~~~~-~--l~~-~t~lv~ 145 (361)
T 3m5u_A 79 SLQFAMIPMNLA-LNGVCEYAN---TGVWTKKAIK---EAQILGVNVKTVA--SSEESNFDHIPRV-E--FSD-NADYAY 145 (361)
T ss_dssp HHHHHHHHHHHC-CSSCEEEEE---CSHHHHHHHH---HHHHTTCCEEEEE--ECTTTTSCSCCCC-C--CCT-TSSEEE
T ss_pred HHHHHHHHHhcC-CCCeEEEEe---CCHHHHHHHH---HHHHcCCceEEEe--cccCcCCCcCChh-h--cCC-CCCEEE
Confidence 889999999998 899763322 1444554321 2233465555554 5532212 45655 3 553 788887
Q ss_pred EcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCCCCch
Q 018300 257 AGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (358)
Q Consensus 257 ~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~ 333 (358)
+.+.. +|...|. +++ +|+++++|++|++|.. |..++.+|++++|.||++ ||.| |+++.++
T Consensus 146 ~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~-----~id~~~~d~~~~s~~K~~-gp~G~g~l~~~~----- 208 (361)
T 3m5u_A 146 ICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSR-----KVDFSNIALFYGGVQKNA-GISGLSCIFIRK----- 208 (361)
T ss_dssp EESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSS-----CCCCTTEEEEEEETTTTS-SCTTCEEEEEEH-----
T ss_pred EeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCC-----CCCcccCCEEEEechhcc-CCCccEEEEEcH-----
Confidence 65433 4665552 344 4999999999998864 333447899999999999 7998 8998887
Q ss_pred hHHHHHHhh
Q 018300 334 VELESAINN 342 (358)
Q Consensus 334 ~~~~~~i~~ 342 (358)
++.+++..
T Consensus 209 -~~~~~~~~ 216 (361)
T 3m5u_A 209 -DMLERSKN 216 (361)
T ss_dssp -HHHHHHHT
T ss_pred -HHHhhhcC
Confidence 56556554
No 115
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.70 E-value=1.4e-16 Score=151.70 Aligned_cols=190 Identities=13% Similarity=0.120 Sum_probs=132.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.+++.|++++...+.. |..+ .+.. ++++.+++++++++|.+++ ..+++++|++|+..++.++++||
T Consensus 25 ~~~~~v~~a~~~~~~~-~~~~------~g~~----~~~~~~~~~l~~~~g~~~~---~v~~~~g~t~a~~~~~~~~~~~g 90 (359)
T 1svv_A 25 GMHPKILDLMARDNMT-QHAG------YGQD----SHCAKAARLIGELLERPDA---DVHFISGGTQTNLIACSLALRPW 90 (359)
T ss_dssp CCCHHHHHHHHHHTTC-CCCS------TTCS----HHHHHHHHHHHHHHTCTTS---EEEEESCHHHHHHHHHHHHCCTT
T ss_pred CCCHHHHHHHHHHHhh-cccc------cccc----HHHHHHHHHHHHHhCCCCc---cEEEeCCchHHHHHHHHHHhCCC
Confidence 6789999999877642 2211 1112 3455577789999998764 23455678889999999999999
Q ss_pred CEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc------CCeEEEEcCCC-CCCC
Q 018300 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPKLIIAGASA-YPRD 265 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~------~~klIi~~~s~-~~~~ 265 (358)
|+|++.++.|.++... ..+...|.. ++.++.+ ++.+|+++|++.+++. ++++|++..++ +|..
T Consensus 91 d~vl~~~~~~~~~~~~------~~~~~~g~~--~~~v~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~ 160 (359)
T 1svv_A 91 EAVIATQLGHISTHET------GAIEATGHK--VVTAPCP--DGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQ 160 (359)
T ss_dssp EEEEEETTSHHHHSST------THHHHTTCC--EEEECCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCC
T ss_pred CEEEEcccchHHHHHH------HHHhcCCCe--eEEEeCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCcee
Confidence 9999998866554321 012345654 4444444 5789999999988764 27888776553 4667
Q ss_pred CC---HHHHHHHHHHcCCEEEEeccc---cccccccCCccCCC---CCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 266 FD---YPRMRQIADAVGALLMMDMAH---ISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 266 ~d---l~~I~~ia~e~g~~livD~Ah---~~Gl~~~g~~~~pl---~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
.+ +++|.++|+++|+++++|++| +.|.. +.....+ ..+|++++|+||+ ++|.| |+++.+++
T Consensus 161 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~~ 231 (359)
T 1svv_A 161 YTKQELEDISASCKEHGLYLFLDGARLASALSSP--VNDLTLADIARLTDMFYIGATKA-GGMFGEALIILNDA 231 (359)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTST--TCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSGG
T ss_pred cCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCC--CcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEccc
Confidence 77 889999999999999999998 33322 1111111 1579999999996 66766 88888775
No 116
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.69 E-value=3.6e-16 Score=152.20 Aligned_cols=162 Identities=21% Similarity=0.249 Sum_probs=119.4
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
.++++++++|.+. .+.++||++|+..++.+++++||+|++.++.|++.... + .......|. ++..++.
T Consensus 57 l~~~la~~~~~~~-----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~-~---~~~~~~~g~--~~~~~~~- 124 (386)
T 1cs1_A 57 VQRALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRL-F---DSLAKRGCY--RVLFVDQ- 124 (386)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH-H---HHHHTTTSC--EEEEECT-
T ss_pred HHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHH-H---HHHHHhcCC--EEEEeCC-
Confidence 4556888999873 46779999999999999999999999998877653210 0 001133454 3344332
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEE
Q 018300 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVT 309 (358)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~ 309 (358)
.|++++++.++. ++++|++..+++ |...|+++|.++|+++|+++++|++|+.+... .+++ ++|+++
T Consensus 125 -----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----~~~~~~~di~~ 193 (386)
T 1cs1_A 125 -----GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ-----NPLALGADLVL 193 (386)
T ss_dssp -----TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----CGGGGTCSEEE
T ss_pred -----CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----CccccCceEEE
Confidence 289999998864 789888876654 56789999999999999999999999865431 2345 789999
Q ss_pred EcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 310 TTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 310 ~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+|+||+++||. ||+++++++ ++.+++..
T Consensus 194 ~s~sK~~~~~~~~~~G~~~~~~~-----~l~~~l~~ 224 (386)
T 1cs1_A 194 HSCTKYLNGHSDVVAGVVIAKDP-----DVVTELAW 224 (386)
T ss_dssp EETTTTTTCSSCCCCEEEEESSH-----HHHHHHHH
T ss_pred EcCcccccCCCCceeEEEEeCcH-----HHHHHHHH
Confidence 99999997775 399998874 45555543
No 117
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.69 E-value=1.2e-15 Score=154.53 Aligned_cols=174 Identities=11% Similarity=0.030 Sum_probs=127.5
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCC--CCCcceEEeCCCHHHHHHHHHHhccCC--------CEEEecCCCCCccccccccc
Q 018300 143 NEYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSGSPANFEVYTAILKPH--------DRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 143 ~~~~~~lE~~~~~~la~lfg~~~--~~~~v~V~~~SGt~A~~~a~~all~pG--------D~Vl~~~~~~ggh~s~~~~~ 212 (358)
.+...++|+.+++++++++|.+. +.. ..+++++|++|+..++.++.++| |+|++..+.|.++.
T Consensus 134 ~p~~~~le~~l~~~la~~~g~~~~~~~v-~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~------ 206 (514)
T 3mad_A 134 WPSTAKFEAEVVAMTAHMLGGDAAGGTV-CGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD------ 206 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHTTGGGGTSCC-EEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH------
T ss_pred ChHHHHHHHHHHHHHHHHcCCCCccCCc-ceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH------
Confidence 34456788888899999999983 211 12556778889999999998777 99999887665532
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccc
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHIS 290 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~ 290 (358)
+.+...|.. ++.+++++ ++.+|+++|++.+++ ++++|++..++ +|...|+++|.++|+++|++|++|++|+.
T Consensus 207 --~~~~~~G~~--v~~v~~~~-~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~ 280 (514)
T 3mad_A 207 --KAAQYFGIK--LVRTPLDA-DYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGG 280 (514)
T ss_dssp --HHHHHHTCE--EEEECBCT-TSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred --HHHHHcCCe--eEEeeeCC-CCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccccc
Confidence 133445654 44555664 678999999999865 78888876665 46788999999999999999999999885
Q ss_pred cccc----cCC--ccCCC--CCCcEEEEcCcCcCccCc-EEEEEEeCC
Q 018300 291 GLVA----ASV--VADPF--KYCDVVTTTTHKSLRGPR-GGMIFFKKD 329 (358)
Q Consensus 291 Gl~~----~g~--~~~pl--~gaDiv~~S~hK~L~Gp~-GG~I~~~~~ 329 (358)
+... .|. .+..+ .++|++++|+||++.||. .|+++++++
T Consensus 281 ~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~ 328 (514)
T 3mad_A 281 FILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRP 328 (514)
T ss_dssp TTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSH
T ss_pred ccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCH
Confidence 4321 111 11111 289999999999976654 488888874
No 118
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.69 E-value=3.1e-16 Score=157.97 Aligned_cols=177 Identities=11% Similarity=-0.034 Sum_probs=125.8
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCC------CcceEEeCCCHHHHHHHHHHhc-------------------cCCCEE
Q 018300 141 GGNEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTAIL-------------------KPHDRI 195 (358)
Q Consensus 141 ~G~~~~~~lE~~~~~~la~lfg~~~~~------~~v~V~~~SGt~A~~~a~~all-------------------~pGD~V 195 (358)
...+...++|+.+.+++++++|.+... .+..+++++||+||+.++.+.. .|+++|
T Consensus 106 ~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v 185 (475)
T 3k40_A 106 IASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVG 185 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEE
T ss_pred cCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEE
Confidence 344667789999999999999998521 0124667889999998887652 145788
Q ss_pred EecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcC-----CeEEEEcC--CCCCCCCCH
Q 018300 196 MGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGA--SAYPRDFDY 268 (358)
Q Consensus 196 l~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~-----~klIi~~~--s~~~~~~dl 268 (358)
++++..|.+.. +.+...|. +++.+++++ ++ +|+++|++.+++.+ |.+|++.. +.+|...|+
T Consensus 186 i~s~~~H~s~~--------~~~~~~g~--~~~~v~~d~-~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l 253 (475)
T 3k40_A 186 YCSDQAHSSVE--------RAGLLGGV--KLRSVQSEN-HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYL 253 (475)
T ss_dssp EEETTSCHHHH--------HHHHHHTC--EEEEECCBT-TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred EECCCchHHHH--------HHHHHcCC--ceEEEECCC-CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCH
Confidence 88876543321 23345565 445555663 57 99999999986531 55555533 346778899
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 269 ~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
++|.++|+++|+++++|+||+.+....+.....+ +.+|.+++++||+|.+|.| |+++++++
T Consensus 254 ~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~ 318 (475)
T 3k40_A 254 DECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDP 318 (475)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSG
T ss_pred HHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCH
Confidence 9999999999999999999987654332222112 2579999999999999976 77777765
No 119
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.69 E-value=2.3e-16 Score=151.93 Aligned_cols=210 Identities=13% Similarity=0.177 Sum_probs=139.4
Q ss_pred cccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCCHH
Q 018300 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGSP 179 (358)
Q Consensus 104 ~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~~SGt~ 179 (358)
-+++..+++ .+++.|++++...+.+. ..+|+.. ..++++.+++++++.+| ++++ ..+++++|++
T Consensus 26 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~~---~v~~~~g~~~ 93 (383)
T 3kax_A 26 LIHAWIADMDFEVPQPIQTALKKRIEHP-IFGYTLP--------PENIGDIICNWTKKQYNWDIQKE---WIVFSAGIVP 93 (383)
T ss_dssp CEECCCSSCSSCCCHHHHHHHHHHHHSC-CCCCCCC--------CTTHHHHHHHHHHHHHCCCCCGG---GEEEESCHHH
T ss_pred eeecccccCCCCCCHHHHHHHHHHHhcC-CCCCCCC--------CHHHHHHHHHHHHHHhCCCCChh---hEEEcCCHHH
Confidence 345544443 35899999998877542 2234321 12466667788899999 4443 2344556677
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC--CCCCHHHHHHHhhhcCCeEEEE
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKLIIA 257 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~iD~d~le~~i~~~~~klIi~ 257 (358)
|+..++.++++|||+|++.++.|.++.. .+...|. ++..+++++++ ..+|+++|++.+. .++++|++
T Consensus 94 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i 162 (383)
T 3kax_A 94 ALSTSIQAFTKENESVLVQPPIYPPFFE--------MVTTNNR--QLCVSPLQKQNDTYAIDFEHLEKQFQ-QGVKLMLL 162 (383)
T ss_dssp HHHHHHHHHCCTTCEEEECSSCCHHHHH--------HHHHTTC--EEEECCCEEETTEEECCHHHHHHHHT-TTCCEEEE
T ss_pred HHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCC--EEEeccceecCCcEEEcHHHHHHHhC-cCCeEEEE
Confidence 9999999999999999999876655421 2344565 44555554322 3589999999984 47898877
Q ss_pred cCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-------CCcEEEEcCcCcC--ccCcEEE
Q 018300 258 GASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRGGM 323 (358)
Q Consensus 258 ~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-------gaDiv~~S~hK~L--~Gp~GG~ 323 (358)
..++++ ...+ +++|.++|+++|+++++|++|+. +...+..+.++. +.++++.|+||++ +|.+.|+
T Consensus 163 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 241 (383)
T 3kax_A 163 CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSD-IIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASI 241 (383)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEE
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccc-cccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheE
Confidence 666554 4555 66677779999999999999874 333332222221 2348899999986 5667799
Q ss_pred EEEeCCCCchhHHHHHHhh
Q 018300 324 IFFKKDPVLGVELESAINN 342 (358)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~ 342 (358)
++++++ ++.+++..
T Consensus 242 ~~~~~~-----~~~~~~~~ 255 (383)
T 3kax_A 242 IIIPNE-----KLRQAFTS 255 (383)
T ss_dssp EECCCH-----HHHHHHHH
T ss_pred EEeCCH-----HHHHHHHH
Confidence 988544 56665544
No 120
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.69 E-value=1.3e-16 Score=157.11 Aligned_cols=214 Identities=13% Similarity=0.090 Sum_probs=143.1
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCCH
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS 178 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~~SGt 178 (358)
+-+++..+++ ..+|.|.+++...+... ..+|+. .. .++++.+++++++.+| ++.+ ..+++++|+
T Consensus 62 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~~---~~l~~~l~~~l~~~~g~~~~~~---~v~~~~g~~ 129 (421)
T 3l8a_A 62 ELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNY-----FN---DDLYQAVIDWERKEHDYAVVKE---DILFIDGVV 129 (421)
T ss_dssp TCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBC-----CC---HHHHHHHHHHHHHHHCCCCCGG---GEEEESCHH
T ss_pred CeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCC-----CC---HHHHHHHHHHHHHHhCCCCCHH---HEEEcCCHH
Confidence 4455554433 45899999998876542 223332 11 3566778888999998 4443 234444556
Q ss_pred HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
+|+..++.+++++||+|++.++.|.++.. .+...|..+..++++....+..+|+++|++.++..++++|++.
T Consensus 130 ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~ 201 (421)
T 3l8a_A 130 PAISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLC 201 (421)
T ss_dssp HHHHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEEC
Confidence 69999999999999999998876655321 2334565444444331222336899999999875578988876
Q ss_pred CCCC--CCC---CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCC-----C--CCcEEEEcCcCcC--ccCcEEEE
Q 018300 259 ASAY--PRD---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-----K--YCDVVTTTTHKSL--RGPRGGMI 324 (358)
Q Consensus 259 ~s~~--~~~---~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl-----~--gaDiv~~S~hK~L--~Gp~GG~I 324 (358)
.+++ |.. .++++|+++|+++|++|++|++|+ ++...|....++ + +.++++.|++|+| +|.+.|++
T Consensus 202 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~ 280 (421)
T 3l8a_A 202 SPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQ-DLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA 280 (421)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEE
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeE
Confidence 6554 344 368999999999999999999987 444444222222 1 3348899999997 46677999
Q ss_pred EEeCCCCchhHHHHHHhh
Q 018300 325 FFKKDPVLGVELESAINN 342 (358)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~ 342 (358)
+++++ ++.+.+..
T Consensus 281 ~~~~~-----~l~~~~~~ 293 (421)
T 3l8a_A 281 IIQNE-----SLRRKFQY 293 (421)
T ss_dssp ECCSH-----HHHHHHHH
T ss_pred EcCCH-----HHHHHHHH
Confidence 98844 56666554
No 121
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.69 E-value=6e-17 Score=162.02 Aligned_cols=214 Identities=14% Similarity=0.129 Sum_probs=137.2
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCC--CCcC-----CCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLP--GKRY-----YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~p--g~r~-----~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A 180 (358)
++..+.++.|.+++.......+..+.. +... +.+.+...++++.+++++++++|++.+ .+++.+|| .+
T Consensus 87 aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~~t~g~te~a 162 (456)
T 2z67_A 87 VRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH----AIATPISTGMS 162 (456)
T ss_dssp EECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE----EEEESSCHHHH
T ss_pred cccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCCC----EEEeCcHHHHH
Confidence 445566778888876533222221111 0000 011223556778899999999999863 35556777 57
Q ss_pred HHHHHHHhcc--CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHh-hh---cCCeE
Q 018300 181 NFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA-IL---FRPKL 254 (358)
Q Consensus 181 ~~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i-~~---~~~kl 254 (358)
|..++.++.. +||+|++++++|.+.. +.+...|..+..+++....+++.+|+++|++.+ +. .++.+
T Consensus 163 ~~~al~~~~~~~~~~~vi~~~~~h~s~~--------~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 234 (456)
T 2z67_A 163 ISLCLSAARKKYGSNVVIYPYASHKSPI--------KAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPC 234 (456)
T ss_dssp HHHHHHHHHHHHCCCEEEEECCCCHHHH--------HHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcHHHH--------HHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEE
Confidence 7767766533 7888888876655421 234456765544443111245789999999998 42 35666
Q ss_pred EEEcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccC---CCC-CCcEEEEcCcCcCccCcE-EEEEEe
Q 018300 255 IIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD---PFK-YCDVVTTTTHKSLRGPRG-GMIFFK 327 (358)
Q Consensus 255 Ii~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~---pl~-gaDiv~~S~hK~L~Gp~G-G~I~~~ 327 (358)
|++..++ +|...|+++|.++|+++|+++++|+||+.... +..+. .+. ++|++++|+||++.||.| |+++++
T Consensus 235 vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~--g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~ 312 (456)
T 2z67_A 235 VLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNN--YYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYST 312 (456)
T ss_dssp EEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH--HHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEES
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHH--HhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEc
Confidence 7665554 46789999999999999999999988763221 11111 112 699999999999877764 899986
Q ss_pred CCCCchhHHHHHHh
Q 018300 328 KDPVLGVELESAIN 341 (358)
Q Consensus 328 ~~~~~~~~~~~~i~ 341 (358)
++ ++.+++.
T Consensus 313 ~~-----~~~~~l~ 321 (456)
T 2z67_A 313 DA-----EFIKEIS 321 (456)
T ss_dssp CH-----HHHHHHH
T ss_pred CH-----HHHhhcC
Confidence 54 5666664
No 122
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.69 E-value=1.6e-16 Score=155.60 Aligned_cols=205 Identities=16% Similarity=0.084 Sum_probs=134.1
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
..+++...++ ..++.+++++ ..+... ..+|+.. .|. .++++.+.+++.+.+|.+.. ....+++++|++|
T Consensus 44 ~~i~l~~~~~~~~~~~~v~~a~-~~l~~~-~~~y~~~---~g~---~~l~~~la~~~~~~~g~~~~-~~~v~~~~g~t~a 114 (409)
T 2gb3_A 44 RIHHLNIGQPDLKTPEVFFERI-YENKPE-VVYYSHS---AGI---WELREAFASYYKRRQRVDVK-PENVLVTNGGSEA 114 (409)
T ss_dssp EEEECSSCCCCSCCCTHHHHHH-HHTCCS-SCCCCCT---TCC---HHHHHHHHHHHHHTSCCCCC-GGGEEEESHHHHH
T ss_pred CEEeccCCCCCCCCCHHHHHHH-HHHhcC-CCCCCCC---CCc---HHHHHHHHHHHHHHhCCCCC-HHHEEEeCCHHHH
Confidence 4456654444 3578899999 776432 2233321 122 35777666777766664321 1123455667889
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-CCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
+..++.++++|||+|++.++.|.++.. .+...|. +++.++.++ ++..+ +++|++.++. ++++|++..
T Consensus 115 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~-~~~l~~~l~~-~~~~v~~~~ 182 (409)
T 2gb3_A 115 ILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGV--KLIPVTRRMEEGFAI-PQNLESFINE-RTKGIVLSN 182 (409)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTC--EEEEEECCGGGTSCC-CTTGGGGCCT-TEEEEEEES
T ss_pred HHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeccCCCCCCcc-HHHHHHhhCc-CCeEEEECC
Confidence 999999999999999999887655421 2334565 344445553 22344 7888887764 688887765
Q ss_pred CCC--CCCC---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 260 SAY--PRDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 260 s~~--~~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
+++ |... ++++|.++|+++|+++++|++|+.+. ..+.....+ .+.|++++|+||++ +|.+.|+++++++
T Consensus 183 p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 261 (409)
T 2gb3_A 183 PCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIV-FRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNE 261 (409)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB-CSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccc-cCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcH
Confidence 554 4444 58999999999999999999998543 222211112 25789999999998 4556799999873
No 123
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.69 E-value=6.5e-16 Score=148.80 Aligned_cols=227 Identities=15% Similarity=0.073 Sum_probs=143.2
Q ss_pred cChHHHHHHHHHHHHhh---hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHH
Q 018300 86 ADPEVCEIITKEKERQF---KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (358)
Q Consensus 86 ~d~~~~~~i~~e~~~~~---~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~l 160 (358)
++|+.+..+.+...+.. .-++|-..++ ..++.|++++...+.. ..+|+. ..|. .++++.+.+++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~---~~g~---~~lr~~la~~l~~~ 75 (376)
T 3ezs_A 4 FEPYPFERLRALLKEITPKKRGLDLGIGEPQFETPKFIQDALKNHTHS--LNIYPK---SAFE---ESLRAAQRGFFKRR 75 (376)
T ss_dssp CCCCHHHHHHHHHTTCCCSSCCCBCSSCCCCSCCCHHHHHHHHTTGGG--GGSCCC---TTCC---HHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHhhhccCCEEEeCCCCCCCCCCHHHHHHHHHhhhh--cCCCCC---CCCC---HHHHHHHHHHHHHH
Confidence 34555555544433322 2344444443 3588999999877622 223433 1222 25677777778888
Q ss_pred cCC--CCCCCcceEEeCCCHHHHHHHHHHhccC--CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC
Q 018300 161 FNL--DENKWGVNVQPLSGSPANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (358)
Q Consensus 161 fg~--~~~~~~v~V~~~SGt~A~~~a~~all~p--GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (358)
+|. +++ ..+++++|++|+..++.++++| ||+|++.++.|.++.. .+...|. +++++++++++
T Consensus 76 ~g~~~~~~---~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~- 141 (376)
T 3ezs_A 76 FKIELKEN---ELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG--------AAKFIKA--KSLLMPLTKEN- 141 (376)
T ss_dssp HSCCCCGG---GEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCGGG-
T ss_pred hCCCCCHH---HEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHH--------HHHHcCC--EEEEcccCCCC-
Confidence 897 443 2355567788999999999999 9999998876655321 2334565 44455555332
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---------
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--------- 302 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl--------- 302 (358)
.+++ ++++.+.. ++++|++..++++ ...+ +++|+++|+++|+++++|++|.. +...+.....+
T Consensus 142 ~~~~-~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~ 218 (376)
T 3ezs_A 142 DFTP-SLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSE-IYENTPPPSLLEACMLAGNE 218 (376)
T ss_dssp TSCC-CCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBSSSCCCCHHHHHHHTTCT
T ss_pred Ccch-hHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchh-hccCCCCCCHHHcccccccc
Confidence 3343 55555544 6888888655554 4555 67788889999999999999874 33333211111
Q ss_pred C-CCcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 303 K-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 303 ~-gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
. +.++++.|+||++ +|.+.|++++++ ++.+++...
T Consensus 219 ~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~~~~~ 256 (376)
T 3ezs_A 219 AFKNVLVIHSLSKRSSAPGLRSGFIAGDS------RLLEKYKAF 256 (376)
T ss_dssp TCTTEEEEEESTTTTTCGGGCCEEEEECH------HHHHHHHHH
T ss_pred ccCcEEEEecchhccCCccceeEEEeeCH------HHHHHHHHH
Confidence 2 5679999999998 566779998876 566666543
No 124
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.69 E-value=3e-17 Score=161.14 Aligned_cols=197 Identities=13% Similarity=0.048 Sum_probs=135.3
Q ss_pred ccCCCCcHHHHHHHhhhhhcccCCCCCC-CcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe--CCCHHHHHHHH
Q 018300 109 ASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP--LSGSPANFEVY 185 (358)
Q Consensus 109 as~n~~s~~V~~al~~~l~~~~~~G~pg-~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~--~SGt~A~~~a~ 185 (358)
++..++|+.|++++...+.+.+..|... ..+..+.++.+.+++ +|+.++++||++.. -+|.+ .+||.++.+++
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~-ar~~la~ll~~~~~---~evif~t~~~T~a~n~a~ 94 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINN-TENLVRELLAVPDN---YKVIFLQGGGCGQFSAVP 94 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHH-HHHHHHHHHTCCTT---EEEEEESSHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHH-HHHHHHHHhCCCCC---CeEEEEcCchHHHHHHHH
Confidence 6667889999999999887655433211 113446666666766 89999999999752 13444 46788999999
Q ss_pred HHhccC--CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC--C
Q 018300 186 TAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--A 261 (358)
Q Consensus 186 ~all~p--GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s--~ 261 (358)
.+++++ ||+|++... +++++.+. +.++..|. +...++++. ++.+|+++++..+. .++++|.+.+. .
T Consensus 95 ~~l~~~~~Gd~v~~~~~---g~~~~~~~---~~a~~~G~--~~~~~~~~~-~~~~~~~~~~~~i~-~~t~lV~~~h~et~ 164 (377)
T 3e77_A 95 LNLIGLKAGRCADYVVT---GAWSAKAA---EEAKKFGT--INIVHPKLG-SYTKIPDPSTWNLN-PDASYVYYCANETV 164 (377)
T ss_dssp HHHGGGSTTCEEEECCC---SHHHHHHH---HHHTTTSE--EEECSCCCS-SSCSCCCGGGCCCC-TTCSCEEEESEETT
T ss_pred HhccCCCCCCeEEEEEC---CHHHHHHH---HHHHHhCC--ceEEeccCC-CcCCCCChHHhccC-CCccEEEEeCccCc
Confidence 999865 999987654 45454331 12234454 344444542 34566666665554 36788766443 3
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCCC
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDP 330 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~~ 330 (358)
+|...|+ +|+++|+++++|++|++|.. |..++..|++++|.||++ ||.| |+++.+++.
T Consensus 165 tG~~~pi-----i~~~~~~~~~vD~~q~~g~~-----~id~~~~~~~~~s~~K~~-gp~G~g~l~~~~~~ 223 (377)
T 3e77_A 165 HGVEFDF-----IPDVKGAVLVCDMSSNFLSK-----PVDVSKFGVIFAGAQKNV-GSAGVTVVIVRDDL 223 (377)
T ss_dssp TTEECSS-----CCCCTTCCEEEECTTTTTSS-----CCCGGGCSEEEEEGGGTT-SCTTCEEEEEETTS
T ss_pred hheEchh-----hhccCCCEEEEEcccccCCC-----CCchhhcCEEEEeccccc-CCCccEEEEEcHHH
Confidence 5888887 47889999999999998854 233335668999999999 8998 888888863
No 125
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.68 E-value=7.1e-16 Score=155.37 Aligned_cols=177 Identities=15% Similarity=0.029 Sum_probs=126.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCC-------cceEEeCCCHHHHHHHHHHhc-------------------cCCCEE
Q 018300 142 GNEYIDELETLCQKRALAAFNLDENKW-------GVNVQPLSGSPANFEVYTAIL-------------------KPHDRI 195 (358)
Q Consensus 142 G~~~~~~lE~~~~~~la~lfg~~~~~~-------~v~V~~~SGt~A~~~a~~all-------------------~pGD~V 195 (358)
..+...++|+.+.+++++++|.+...+ +..+++++||+||+.++.+.. .|+++|
T Consensus 112 ~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v 191 (481)
T 4e1o_A 112 SSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVA 191 (481)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEE
Confidence 345667899999999999999975310 123667788999998887652 267889
Q ss_pred EecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcC-----CeEEEEcC--CCCCCCCCH
Q 018300 196 MGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGA--SAYPRDFDY 268 (358)
Q Consensus 196 l~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~-----~klIi~~~--s~~~~~~dl 268 (358)
++++..|.+.. +.+.+.|. +++.++++ +++.+|+++|++.+++.+ |.+|++.. +.+|...|+
T Consensus 192 ~~s~~~H~s~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l 260 (481)
T 4e1o_A 192 YASDQAHSSVE--------KAGLISLV--KMKFLPVD-DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCL 260 (481)
T ss_dssp EEETTSCHHHH--------HHHHHHTC--EEEEECCC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred EEcCcchHHHH--------HHHHhCCC--ceEEEEcC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCH
Confidence 98876443321 23344565 44455565 467999999999986532 56555543 335778899
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCccCCC---CCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 269 ~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
++|+++|++||+++++|+||..+..........+ +.+|.+++++||+|.+|.| |+++.+++
T Consensus 261 ~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~ 325 (481)
T 4e1o_A 261 SELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDK 325 (481)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBH
T ss_pred HHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCH
Confidence 9999999999999999999987654332221112 2469999999999999976 77777764
No 126
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.68 E-value=7.7e-16 Score=149.33 Aligned_cols=226 Identities=15% Similarity=0.100 Sum_probs=145.9
Q ss_pred ccccccChHHHHHHHHHHHHh-----hhcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQ-----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~-----~~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~ 153 (358)
.+++.+.++.+..+.+...+. +.-|+|-..++ .+++.|++++...+... .+|+.. .|. .++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~---~g~---~~lr~~l 75 (396)
T 3jtx_A 4 TLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHEL--EKYPLT---AGL---PELRQAC 75 (396)
T ss_dssp HHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGG--GSCCCT---TCC---HHHHHHH
T ss_pred hhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhc--cCCCCC---CCc---HHHHHHH
Confidence 345566666665555433332 23455544443 35899999998776422 234431 232 2567777
Q ss_pred HHHHHHHcCCC---CCCCcceEEeCCCHHHHHHHHHHhccCC-----CEEEecCCCCCcccccccccchhccccCCceEE
Q 018300 154 QKRALAAFNLD---ENKWGVNVQPLSGSPANFEVYTAILKPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (358)
Q Consensus 154 ~~~la~lfg~~---~~~~~v~V~~~SGt~A~~~a~~all~pG-----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (358)
.+++.+.+|.+ +++. .+++++|++|+..++.++++|| |+|++.++.|.++.. .+...|. +
T Consensus 76 a~~l~~~~g~~~~~~~~~--i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~--------~~~~~g~--~ 143 (396)
T 3jtx_A 76 ANWLKRRYDGLTVDADNE--ILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG--------ATLLGGG--E 143 (396)
T ss_dssp HHHHHHHTTTCCCCTTTS--EEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH--------HHHHTTC--E
T ss_pred HHHHHHhcCCCCCCCCCe--EEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH--------HHHHcCC--E
Confidence 77888888864 4201 2444555679999999999997 799998876654321 2344565 4
Q ss_pred EEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccC
Q 018300 226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (358)
Q Consensus 226 ~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~ 300 (358)
++++++++++..+|++++++.+.. ++++|++..+++ |...+ +++|.++|+++|+++++|++|+. +...+..+.
T Consensus 144 ~~~v~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~ 221 (396)
T 3jtx_A 144 IHFANCPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSE-IYFDGNKPL 221 (396)
T ss_dssp EEEEECCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTT-CCSTTCCCC
T ss_pred EEEeecCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCc
Confidence 445555544457899999988865 788888765555 44555 55589999999999999999874 333331111
Q ss_pred C-C---------CCCcEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 301 P-F---------KYCDVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 301 p-l---------~gaDiv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
. + .+.++++.|++|++ +|.+.|++++++
T Consensus 222 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 261 (396)
T 3jtx_A 222 GCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDA 261 (396)
T ss_dssp CHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECH
T ss_pred hHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCH
Confidence 1 1 25678899999974 667789998876
No 127
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.68 E-value=8.5e-16 Score=151.13 Aligned_cols=208 Identities=14% Similarity=0.048 Sum_probs=136.8
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
.-++|-..++ .+++.|++++...+.+....+|+.. .|. .++++.+.+++.+.+|.+.+ ....+++++|++|
T Consensus 45 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~---~~lr~~la~~~~~~~g~~~~-~~~i~~t~g~t~a 117 (437)
T 3g0t_A 45 KFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNL---DGL---PELKQEASRFAKLFVNIDIP-ARACVPTVGSMQG 117 (437)
T ss_dssp CCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCT---TCC---HHHHHHHHHHHHHHHCCCCC-GGGEEEESHHHHH
T ss_pred CEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCC---CCh---HHHHHHHHHHHHHhhCCCCC-cccEEEeCCHHHH
Confidence 4456654444 3589999999888764332344431 122 35666666666666665421 1123445556779
Q ss_pred HHHHHHHhc--cCCC--EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEE
Q 018300 181 NFEVYTAIL--KPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (358)
Q Consensus 181 ~~~a~~all--~pGD--~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi 256 (358)
+..++.+++ +||| +|++.++.|.++.. .+...|..+. .+++++++..+|+++|++.++..++++|+
T Consensus 118 l~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~--------~~~~~g~~~~--~v~~~~~~~~~d~~~l~~~l~~~~~~~v~ 187 (437)
T 3g0t_A 118 CFVSFLVANRTHKNREYGTLFIDPGFNLNKL--------QCRILGQKFE--SFDLFEYRGEKLREKLESYLQTGQFCSII 187 (437)
T ss_dssp HHHHHHHHTTSCTTCSCCEEEEESCCHHHHH--------HHHHHTCCCE--EEEGGGGCTTHHHHHHHHHHTTTCCCEEE
T ss_pred HHHHHHHHhcCCCCCccEEEEeCCCcHhHHH--------HHHHcCCEEE--EEeecCCCCccCHHHHHHHHhcCCceEEE
Confidence 999999998 9999 99998876654321 2334565444 44455445578999999998545789887
Q ss_pred EcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccC--------CC---CCCcEEEEcCcCcC--cc
Q 018300 257 AGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--------PF---KYCDVVTTTTHKSL--RG 318 (358)
Q Consensus 257 ~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~--------pl---~gaDiv~~S~hK~L--~G 318 (358)
+..+++ |...+ +++|+++|+++|++|++|++|+.... .+..+. .+ .+.+++++|+||++ +|
T Consensus 188 l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 266 (437)
T 3g0t_A 188 YSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDF-RKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG 266 (437)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCT-TSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhccc-CCCcCcccccchhhccCCCCCcEEEEEcCccCCCCcc
Confidence 755554 44555 77789999999999999999974322 221111 11 14568999999996 56
Q ss_pred CcEEEEEEeC
Q 018300 319 PRGGMIFFKK 328 (358)
Q Consensus 319 p~GG~I~~~~ 328 (358)
.+.|++++++
T Consensus 267 ~r~G~~~~~~ 276 (437)
T 3g0t_A 267 QRIGVLMISG 276 (437)
T ss_dssp GCCEEEEECH
T ss_pred ceeEEEEECH
Confidence 6779999886
No 128
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.68 E-value=9.1e-16 Score=151.56 Aligned_cols=192 Identities=15% Similarity=0.093 Sum_probs=130.4
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC-----CCCCCCcceEEeCCCHHHHHHHHHH
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-----LDENKWGVNVQPLSGSPANFEVYTA 187 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg-----~~~~~~~v~V~~~SGt~A~~~a~~a 187 (358)
++++.|++++...+......+|+.. .|.+ ++ ++.++++++ ++.+ ..+++++|++|+..++.+
T Consensus 71 ~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~---~l----r~~la~~~~~~~~~~~~~---~v~~t~g~t~al~~~~~~ 137 (427)
T 3dyd_A 71 PTDPEVTQAMKDALDSGKYNGYAPS---IGFL---SS----REEIASYYHCPEAPLEAK---DVILTSGCSQAIDLCLAV 137 (427)
T ss_dssp CCCHHHHHHHHHHHHHCCSSSCCCT---TCCH---HH----HHHHHHHHCBTTBCCCGG---GEEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCcCCCCCCC---CCcH---HH----HHHHHHHHhhcCCCCChH---HEEEecCcHHHHHHHHHH
Confidence 6799999999887765433344321 1222 33 445677777 4443 235556678899999999
Q ss_pred hccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-CCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CC
Q 018300 188 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAY--PR 264 (358)
Q Consensus 188 ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~ 264 (358)
+++|||+|++.++.|.++.. .+...|..+ ..+++++ ++..+|++++++.++. ++++|++..+++ |.
T Consensus 138 l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~--~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~ 206 (427)
T 3dyd_A 138 LANPGQNILVPRPGFSLYKT--------LAESMGIEV--KLYNLLPEKSWEIDLKQLEYLIDE-KTACLIVNNPSNPCGS 206 (427)
T ss_dssp HCCTTCEEEEEESCCTHHHH--------HHHHTTCEE--EEEEEEGGGTTEECHHHHHSSCCT-TEEEEEEESSCTTTCC
T ss_pred hcCCCCEEEEcCCCchhHHH--------HHHHcCCEE--EEEecccccCCCCCHHHHHHHhcc-CCCEEEEECCCCCCCC
Confidence 99999999999876655421 234456544 4444443 3457899999998864 677777655554 45
Q ss_pred CCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCc---EEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 265 DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD---VVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 265 ~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaD---iv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
..+ +++|+++|+++|+++++|++|. ++...+..+.++. +.| +++.|+||++ +|.|.|+++++++
T Consensus 207 ~~~~~~l~~i~~~~~~~~~~~i~Deay~-~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~ 280 (427)
T 3dyd_A 207 VFSKRHLQKILAVAARQCVPILADEIYG-DMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDR 280 (427)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECTTT-TCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEcCch-hhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCc
Confidence 777 9999999999999999999987 4443332222222 223 6688999984 5677799998753
No 129
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.68 E-value=2.5e-16 Score=154.70 Aligned_cols=160 Identities=14% Similarity=0.115 Sum_probs=117.1
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
+++++++++|.+. .+.++||++|+..++. +++|||+|+++++.|++...... ..+...|..+ ..++++
T Consensus 60 lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v--~~v~~~ 127 (393)
T 1n8p_A 60 LERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFT----KVANAHGVET--SFTNDL 127 (393)
T ss_dssp HHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHH----HTSTTTCSCC--EEESSH
T ss_pred HHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHH----HHHHHcCcEE--EEeCCC
Confidence 4566899999873 4778999999999999 99999999999887765322100 0123345433 333332
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHc----CCEEEEeccccccccccCCccCCCC-CC
Q 018300 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAV----GALLMMDMAHISGLVAASVVADPFK-YC 305 (358)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~----g~~livD~Ah~~Gl~~~g~~~~pl~-ga 305 (358)
| +++++.++. ++++|++..+++ |...|+++|.++|+++ |+++++|++|+.+... .+++ ++
T Consensus 128 ------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-----~~~~~~~ 194 (393)
T 1n8p_A 128 ------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-----NPLNFGA 194 (393)
T ss_dssp ------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----CGGGGTC
T ss_pred ------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-----CHHHcCC
Confidence 7 889988764 688998876654 5688999999999999 9999999999876531 3444 79
Q ss_pred cEEEEcCcCcCccCc---EEEEEEeCCCCchhHHHHHHhh
Q 018300 306 DVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 306 Div~~S~hK~L~Gp~---GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|++++|+||+++++. ||+++++++ ++.+++..
T Consensus 195 di~~~S~sK~~g~~G~rigG~~~~~~~-----~~~~~l~~ 229 (393)
T 1n8p_A 195 DIVVHSATKYINGHSDVVLGVLATNNK-----PLYERLQF 229 (393)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHH
T ss_pred eEEEEECcccccCCCCceeEEEEeCCH-----HHHHHHHH
Confidence 999999999886542 499988643 55555543
No 130
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.68 E-value=3.8e-15 Score=143.72 Aligned_cols=211 Identities=14% Similarity=0.111 Sum_probs=142.1
Q ss_pred ccccccCC--CCcHHHHHHHhhhhhccc--CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCC-
Q 018300 105 LELIASEN--FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG- 177 (358)
Q Consensus 105 i~lias~n--~~s~~V~~al~~~l~~~~--~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SG- 177 (358)
++|...++ ..++.+++++...+.+.. ..+|+.. .+ .++++.+.+++.+.+|. +++ +|.+++|
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~~----~~l~~~la~~l~~~~g~~~~~~----~v~~~~G~ 101 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPER---DA----VELRDELAAYITKQTGVAVTRD----NLWAANGS 101 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCT---TC----HHHHHHHHHHHHHHHCCCCCGG----GEEEESHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCc---cH----HHHHHHHHHhhhhcccCCCChH----hEEECCCh
Confidence 56655544 357899999887765421 1233321 11 35666666666666654 332 3555555
Q ss_pred HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEE
Q 018300 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (358)
Q Consensus 178 t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~ 257 (358)
++|+..++.++++|||+|++.++.|.++.. .+...|.. ++.++.+ +++.+|++++++.++..++++|++
T Consensus 102 ~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~ 170 (369)
T 3cq5_A 102 NEILQQLLQAFGGPGRTALGFQPSYSMHPI--------LAKGTHTE--FIAVSRG-ADFRIDMDVALEEIRAKQPDIVFV 170 (369)
T ss_dssp HHHHHHHHHHHCSTTCEEEEEESSCTHHHH--------HHHHTTCE--EEEEECC-TTSSCCHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCE--EEEecCC-cCCCCCHHHHHHHhhccCCCEEEE
Confidence 568989999999999999999887765421 23345654 4444454 345799999999887547898888
Q ss_pred cCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--C-CcEEEEcCcCcC--ccCcEEEEEEeCCC
Q 018300 258 GASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (358)
Q Consensus 258 ~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--g-aDiv~~S~hK~L--~Gp~GG~I~~~~~~ 330 (358)
..+++ |...|.+++.++|+.+++++++|++|+.+.. .......++ + .++++.|+||++ +|.+.|++++++
T Consensus 171 ~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-- 247 (369)
T 3cq5_A 171 TTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSP-SPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP-- 247 (369)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCC-SCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcC-CcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--
Confidence 65554 5688999999999999999999999985432 111001112 3 568999999998 456679999986
Q ss_pred CchhHHHHHHhhcc
Q 018300 331 VLGVELESAINNAV 344 (358)
Q Consensus 331 ~~~~~~~~~i~~~~ 344 (358)
++.+++....
T Consensus 248 ----~~~~~l~~~~ 257 (369)
T 3cq5_A 248 ----AFIDAVMLVR 257 (369)
T ss_dssp ----HHHHHHHTTS
T ss_pred ----HHHHHHHHcC
Confidence 6767776543
No 131
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.68 E-value=6.1e-16 Score=155.41 Aligned_cols=192 Identities=15% Similarity=0.131 Sum_probs=132.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh----c
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al----l 189 (358)
..|.+.+++...+. .| .|..... -..-..++++.+++++++++|.+. ..+++++|+.|+..++.++ .
T Consensus 78 ~~p~v~~~~~~~~~-~~---~~~~~~~-~~~g~~~l~~~l~~~la~~~g~~~----~~~~~~ggt~a~~~al~~~~~~~~ 148 (474)
T 1wyu_B 78 YNPKLHEEAARLFA-DL---HPYQDPR-TAQGALRLMWELGEYLKALTGMDA----ITLEPAAGAHGELTGILIIRAYHE 148 (474)
T ss_dssp CCCHHHHHHHHTTS-SC---CTTSCGG-GCHHHHHHHHHHHHHHHHHHTCSE----EECCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-hc---CCCCchh-hChHHHHHHHHHHHHHHHHHCCCc----eeecChHHHHHHHHHHHHHHHHHH
Confidence 34677777765422 12 2211100 012233566678889999999975 2345567788998766554 4
Q ss_pred cCCC-----EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CC
Q 018300 190 KPHD-----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YP 263 (358)
Q Consensus 190 ~pGD-----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~ 263 (358)
++|| +|+++++.|+++.. .+...|. +++.++++ +++.+|+++|++.+.+ ++++|++..++ +|
T Consensus 149 ~~Gd~~~r~~Vlv~~~~h~~~~~--------~~~~~G~--~vv~v~~~-~~~~~d~~~L~~~i~~-~t~~v~~~~pn~~G 216 (474)
T 1wyu_B 149 DRGEGRTRRVVLVPDSAHGSNPA--------TASMAGY--QVREIPSG-PEGEVDLEALKRELGP-HVAALMLTNPNTLG 216 (474)
T ss_dssp HTTCTTTCCEEEEETTSCTHHHH--------HHHHTTC--EEEEECBC-TTSSBCHHHHHHHCST-TEEEEEECSSCTTS
T ss_pred hcCCccCCCEEEEeCCcChhhHH--------HHHHCCC--EEEEecCC-CCCCcCHHHHHHhhCC-CceEEEEECCCCCc
Confidence 6898 99999876665432 2345665 44555565 3578999999999864 67888876655 45
Q ss_pred CC-CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCccC------cEEEEEEeCC
Q 018300 264 RD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP------RGGMIFFKKD 329 (358)
Q Consensus 264 ~~-~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~Gp------~GG~I~~~~~ 329 (358)
.. .|+++|.++|+++|+++++|++|+.+.. +.. .+.+ ++|++++|+||+|.+| +.|+++++++
T Consensus 217 ~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~--g~~-~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~ 287 (474)
T 1wyu_B 217 LFERRILEISRLCKEAGVQLYYDGANLNAIM--GWA-RPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH 287 (474)
T ss_dssp CCCTTHHHHHHHHHHHTCEEEEEGGGGGGTT--TTC-CHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGG
T ss_pred ccCCCHHHHHHHHHHcCCEEEEeCchhhhhc--cCC-CcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHH
Confidence 55 5899999999999999999999976653 111 2222 7999999999999765 5699999874
No 132
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.68 E-value=3e-16 Score=157.87 Aligned_cols=162 Identities=19% Similarity=0.188 Sum_probs=119.5
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 152 LCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 152 ~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
.+++++++++|.+. .+++++|+.|+.+++. +++|||+|+++++.|+++.... ...+...|. +++.++.
T Consensus 137 ~l~~~la~~~g~~~-----~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~----~~~~~~~G~--~v~~v~~ 204 (464)
T 1ibj_A 137 ALESLLAKLDKADR-----AFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLL----SQVVPRSGV--VVKRVNT 204 (464)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHH----HHTSGGGTC--EEEEECT
T ss_pred HHHHHHHHHhCCCe-----EEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHH----HHHHHHcCC--EEEEeCC
Confidence 35667889999863 3667899999988775 7899999999998776653200 001234455 3444333
Q ss_pred cCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEE
Q 018300 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVV 308 (358)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv 308 (358)
.|++++++.++. ++|+|++..+++ |...|+++|.++|+++|+++++|++|+.|.. ..+++ ++|++
T Consensus 205 ------~d~~~l~~~i~~-~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~-----~~~~~~~~div 272 (464)
T 1ibj_A 205 ------TKLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVL-----SRPLELGADIV 272 (464)
T ss_dssp ------TSHHHHHHHCCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTT-----CCGGGTTCSEE
T ss_pred ------CCHHHHHHHhcc-CceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCccccc-----CChhhcCCEEE
Confidence 289999998864 789999877665 5688999999999999999999999986643 23445 79999
Q ss_pred EEcCcCcCccC---cEEEEEEeCCCCchhHHHHHHhh
Q 018300 309 TTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 309 ~~S~hK~L~Gp---~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
++|+||++.|| ++|+++++++ ++.+++..
T Consensus 273 ~~S~sK~~~g~~Gl~~G~l~~~~~-----~l~~~l~~ 304 (464)
T 1ibj_A 273 MHSATKFIAGHSDVMAGVLAVKGE-----KLAKEVYF 304 (464)
T ss_dssp EEETTTTTTCSSCCCCEEEEECSH-----HHHHHHHH
T ss_pred EECCcccccCCCCCcEEEEEEChH-----HHHHHHHH
Confidence 99999999876 4599999864 45555543
No 133
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.68 E-value=9.4e-16 Score=148.75 Aligned_cols=211 Identities=14% Similarity=0.094 Sum_probs=138.1
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHH-HHHHHHHHHHHHcC--CCCCCCcceEEeCCC
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDE-LETLCQKRALAAFN--LDENKWGVNVQPLSG 177 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~-lE~~~~~~la~lfg--~~~~~~~v~V~~~SG 177 (358)
.-+++..+++ .+++.|.+++...+... ..+|+. + ..+ +++.+.+++.+.+| ++++ ..+++++|
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~~lr~~la~~l~~~~g~~~~~~---~v~~t~g~ 96 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSR-----W---KNDEFLAAIAHWFSTQHYTAIDSQ---TVVYGPSV 96 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCC-----S---CCHHHHHHHHHHHHHHSCCCCCGG---GEEEESCH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCC-----C---ChHHHHHHHHHHHHHhcCCCCCHH---HEEEcCCH
Confidence 3455543333 46899999998876432 223332 1 235 66767777777778 4443 22344455
Q ss_pred HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC--CCCCHHHHHHHhhhcCCeEE
Q 018300 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKLI 255 (358)
Q Consensus 178 t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~iD~d~le~~i~~~~~klI 255 (358)
++|+..++.++++|||+|++.++.|.++.. .+...|.. ++.+++++++ ..+|+++|++.++..++++|
T Consensus 97 ~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~--~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v 166 (390)
T 1d2f_A 97 IYMVSELIRQWSETGEGVVIHTPAYDAFYK--------AIEGNQRT--VMPVALEKQADGWFCDMGKLEAVLAKPECKIM 166 (390)
T ss_dssp HHHHHHHHHHSSCTTCEEEEEESCCHHHHH--------HHHHTTCE--EEEEECEECSSSEECCHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHHH--------HHHHCCCE--EEEeecccCCCccccCHHHHHHHhccCCCeEE
Confidence 679999999999999999998876655421 23345654 3444454332 25899999998875478888
Q ss_pred EEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCC---CC-CC-cEEEEcCcCcC--ccCcEEE
Q 018300 256 IAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YC-DVVTTTTHKSL--RGPRGGM 323 (358)
Q Consensus 256 i~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p---l~-ga-Div~~S~hK~L--~Gp~GG~ 323 (358)
++..+++ |...+ +++|.++|+++|+++++|++|+.+ ...+..+.+ ++ .. |. +.|+||++ +|.+.|+
T Consensus 167 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~ 244 (390)
T 1d2f_A 167 LLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDM-VWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAY 244 (390)
T ss_dssp EEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTC-BCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEE
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheE
Confidence 7755554 44555 899999999999999999999853 333321112 22 22 77 99999997 5667799
Q ss_pred EEEeCCCCchhHHHHHHhh
Q 018300 324 IFFKKDPVLGVELESAINN 342 (358)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~ 342 (358)
++++++ ++.+++..
T Consensus 245 ~~~~~~-----~~~~~~~~ 258 (390)
T 1d2f_A 245 GIIENS-----SSRDAYLS 258 (390)
T ss_dssp EEECSH-----HHHHHHHH
T ss_pred EEECCH-----HHHHHHHH
Confidence 998654 56555544
No 134
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.67 E-value=3.2e-17 Score=163.68 Aligned_cols=165 Identities=13% Similarity=0.114 Sum_probs=117.0
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEeC-CCHHHHHHHHHHhccCCCE---EEecCCCCCcccccccccchhccccCCceEE-
Q 018300 151 TLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAILKPHDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE- 225 (358)
Q Consensus 151 ~~~~~~la~lfg~~~~~~~v~V~~~-SGt~A~~~a~~all~pGD~---Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~- 225 (358)
+.+++++++++|++++ +|.++ ++|.++..++.++++|||+ |++.++.|.+... .+. ..+...|..+.
T Consensus 114 ~~l~~~la~~~g~~~~----~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~-~~~---~~~~~~G~~~~~ 185 (465)
T 3e9k_A 114 ESIVGLMKDIVGANEK----EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHY-AIE---SQLQLHGLNIEE 185 (465)
T ss_dssp HHHHGGGHHHHTCCGG----GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHH-HHH---HHHHHTTCCHHH
T ss_pred HHHHHHHHHHcCCCcC----CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHH-HHH---HHHHHcCCccee
Confidence 3467789999999864 34445 5566999999999877665 9999887655321 010 01223443221
Q ss_pred --EEeceecCCCCCCCHHHHHHHhhh--cCCeEEEEcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc
Q 018300 226 --SMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (358)
Q Consensus 226 --~~~~~~~~~~~~iD~d~le~~i~~--~~~klIi~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~ 299 (358)
+...+.+ +++.+|++++++.+++ .++++|++...+ +|...|+++|.++|+++|+++++|++|+.|.. +
T Consensus 186 ~~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~-----~ 259 (465)
T 3e9k_A 186 SMRMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNV-----E 259 (465)
T ss_dssp HEEEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTS-----C
T ss_pred eeEEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCc-----C
Confidence 1112233 4568999999999863 267888876654 46789999999999999999999999997754 2
Q ss_pred CCCC--CCcEEEEcCcCcC-ccCcE-EEEEEeCC
Q 018300 300 DPFK--YCDVVTTTTHKSL-RGPRG-GMIFFKKD 329 (358)
Q Consensus 300 ~pl~--gaDiv~~S~hK~L-~Gp~G-G~I~~~~~ 329 (358)
..+. ++|++++|+||+| .||.| |+++.+++
T Consensus 260 ~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~ 293 (465)
T 3e9k_A 260 LYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEK 293 (465)
T ss_dssp CCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGG
T ss_pred CchhhcCCCEEEECcccccccCCCceEEEEEcHH
Confidence 2333 8999999999999 48876 88888774
No 135
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.67 E-value=1.8e-15 Score=148.29 Aligned_cols=223 Identities=11% Similarity=0.115 Sum_probs=139.2
Q ss_pred ccccChHHHHHHHHHHHHhh-----hccccccc-------CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHH
Q 018300 83 LGEADPEVCEIITKEKERQF-----KSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELE 150 (358)
Q Consensus 83 l~~~d~~~~~~i~~e~~~~~-----~~i~lias-------~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE 150 (358)
.+..++.++.++++.+.... .-++|-.+ +..+++.|.+++....... ..+|+. ..|.. +++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~---~~g~~---~lr 86 (418)
T 3rq1_A 14 GKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAP---IAGIP---DFL 86 (418)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCC---TTCCH---HHH
T ss_pred CCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCC---CCChH---HHH
Confidence 45566677777766544433 23454433 4457888999986643211 123332 12333 455
Q ss_pred HHHHHHHHHHcCCCCCCCcceE-EeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEec
Q 018300 151 TLCQKRALAAFNLDENKWGVNV-QPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY 229 (358)
Q Consensus 151 ~~~~~~la~lfg~~~~~~~v~V-~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~ 229 (358)
+.+.+++....+.+.. .+| ++.+|++|+..++.++++|||+|+++++.|.++.. .+...|. +++++
T Consensus 87 ~~ia~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v 153 (418)
T 3rq1_A 87 CAAEKECFGNFRPEGH---IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV--------ICSDTGR--TLVTY 153 (418)
T ss_dssp HHHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEE
T ss_pred HHHHHHHhcccCcccc---ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHH--------HHHHcCC--EEEEE
Confidence 5555555555554421 134 44556679999999999999999999887665432 2345565 45555
Q ss_pred eecCCCCCCCHHHHHHHhhhc---CCe-EEEEcCC-CC--CCCCCHHH---HHHHHH------HcCCEEEEecccccccc
Q 018300 230 RLDESTGLVDYDMLEKTAILF---RPK-LIIAGAS-AY--PRDFDYPR---MRQIAD------AVGALLMMDMAHISGLV 293 (358)
Q Consensus 230 ~~~~~~~~iD~d~le~~i~~~---~~k-lIi~~~s-~~--~~~~dl~~---I~~ia~------e~g~~livD~Ah~~Gl~ 293 (358)
+++++++.+|++++++.+++. +++ +|+++.+ ++ |...+.++ |+++|+ ++|+++++|++|. ++.
T Consensus 154 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~-~~~ 232 (418)
T 3rq1_A 154 SLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYL-DYS 232 (418)
T ss_dssp CSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTG-GGS
T ss_pred eeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccc-ccc
Confidence 565455689999999988652 566 6777655 54 45667554 555666 8999999999984 554
Q ss_pred ccCCcc----CCCC--CCc---EEEEcCcCcC--ccCcEEEEEE
Q 018300 294 AASVVA----DPFK--YCD---VVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 294 ~~g~~~----~pl~--gaD---iv~~S~hK~L--~Gp~GG~I~~ 326 (358)
..+... ...+ ..| +++.|++|++ +|.|.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~ 276 (418)
T 3rq1_A 233 GEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIG 276 (418)
T ss_dssp SCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEE
T ss_pred CChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEE
Confidence 432211 1111 123 7789999986 5678899988
No 136
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.67 E-value=8.6e-16 Score=147.80 Aligned_cols=208 Identities=13% Similarity=0.090 Sum_probs=138.3
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCCCH
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 178 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~--~~~~~v~V~~~SGt 178 (358)
.-+++...++ .+++.|++++...+.+. ..+|+. . |. ++++.+.+++.+.+|.+ .+ ..+++++|+
T Consensus 24 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-~---~~----~lr~~la~~~~~~~~~~~~~~---~i~~t~g~~ 91 (377)
T 3fdb_A 24 GVLPLWVAESDFSTCPAVLQAITDAVQRE-AFGYQP-D---GS----LLSQATAEFYADRYGYQARPE---WIFPIPDVV 91 (377)
T ss_dssp TSEECCSSCCCSCCCHHHHHHHHHHHHTT-CCSSCC-S---SC----CHHHHHHHHHHHHHCCCCCGG---GEEEESCHH
T ss_pred CeeeecccCCCCCCCHHHHHHHHHHHHcC-CCCCCC-C---CH----HHHHHHHHHHHHHhCCCCCHH---HEEEeCChH
Confidence 4456654444 46899999998877642 224443 1 22 35665666666666643 32 234455667
Q ss_pred HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
+|+..++.++++|||+|++.++.|.++.. .+...|.. +++++++++ +|++++++.++. ++++|++.
T Consensus 92 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~--~~~~~~~~~---~d~~~l~~~l~~-~~~~v~i~ 157 (377)
T 3fdb_A 92 RGLYIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQRE--GIFIDATGG---INLHDVEKGFQA-GARSILLC 157 (377)
T ss_dssp HHHHHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTCC--EEEEECTTS---CCHHHHHHHHHT-TCCEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCE--EEEccCCCC---CCHHHHHHHhcc-CCCEEEEe
Confidence 89999999999999999998876665421 23344553 445556543 999999999875 57888776
Q ss_pred CCCCC--CCC---CHHHHHHHHHHcCCEEEEeccccccccccC-CccCCCC-----CCcEEEEcCcCcC--ccCcEEEEE
Q 018300 259 ASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPFK-----YCDVVTTTTHKSL--RGPRGGMIF 325 (358)
Q Consensus 259 ~s~~~--~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g-~~~~pl~-----gaDiv~~S~hK~L--~Gp~GG~I~ 325 (358)
.++++ ... ++++|+++|+++|+++++|++|+. +...+ ..+.++. +.++++.|++|++ +|.+.|+++
T Consensus 158 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 236 (377)
T 3fdb_A 158 NPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAP-LVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQII 236 (377)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGG-GBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccch-hhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEE
Confidence 65554 455 477788889999999999999884 33333 2222222 2348899999998 566779877
Q ss_pred EeCCCCchhHHHHHHhh
Q 018300 326 FKKDPVLGVELESAINN 342 (358)
Q Consensus 326 ~~~~~~~~~~~~~~i~~ 342 (358)
..++ ++.+++..
T Consensus 237 ~~~~-----~~~~~~~~ 248 (377)
T 3fdb_A 237 FSNP-----SDAEHWQQ 248 (377)
T ss_dssp CCSH-----HHHHHHHH
T ss_pred eCCH-----HHHHHHHH
Confidence 7544 56666654
No 137
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.66 E-value=1.1e-16 Score=168.52 Aligned_cols=160 Identities=15% Similarity=0.070 Sum_probs=115.4
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
++++++++||++.. +++++|| .||.+++.++++|||+|++..+.|.++. ..+.+.|.. +++++.
T Consensus 200 aE~~lA~~fGa~~a-----~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~--------~~l~lsGa~--pv~v~~ 264 (715)
T 3n75_A 200 AEQYIARVFNADRS-----YMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLT--------HLMMMSDVT--PIYFRP 264 (715)
T ss_dssp HHHHHHHHHTCSEE-----EEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHH--------HHHHHSCCE--EEEECC
T ss_pred HHHHHHHHhCCCCc-----eEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHH--------HHHHHcCCE--EEEEec
Confidence 56678999999873 5667885 7999999999999999999987554432 134566764 344333
Q ss_pred cCCCC----CC-----CHHHHHHHhhhc-CCe---EEEE-cCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCC
Q 018300 232 DESTG----LV-----DYDMLEKTAILF-RPK---LIIA-GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (358)
Q Consensus 232 ~~~~~----~i-----D~d~le~~i~~~-~~k---lIi~-~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~ 297 (358)
+.++. .+ |+++|++.+++. ++| ++++ +++.+|...|+++|.++|++++ +++|+||+.|+.+.+.
T Consensus 265 ~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~ 342 (715)
T 3n75_A 265 TRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (715)
T ss_dssp CBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGG
T ss_pred cccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCc
Confidence 22222 24 899999998753 233 5555 4444688899999999998764 7999999988654433
Q ss_pred cc--CCCC-C--CcEE---EEcCcCcCccC-cEEEEEEeCC
Q 018300 298 VA--DPFK-Y--CDVV---TTTTHKSLRGP-RGGMIFFKKD 329 (358)
Q Consensus 298 ~~--~pl~-g--aDiv---~~S~hK~L~Gp-~GG~I~~~~~ 329 (358)
.+ +++. + +|++ ++|+||+|+|+ +||+|+++++
T Consensus 343 ~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~ 383 (715)
T 3n75_A 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD 383 (715)
T ss_dssp GTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESC
T ss_pred cccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCch
Confidence 32 3343 3 6866 99999999998 6799998876
No 138
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.66 E-value=1.3e-15 Score=149.97 Aligned_cols=153 Identities=18% Similarity=0.180 Sum_probs=111.8
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
+++++++++|.+. .+++.||++|+..++.+++++||+|+++++.|+++..... ..+...|. ++..+++
T Consensus 61 l~~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~- 128 (412)
T 2cb1_A 61 LEERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFG----QVLSLMGV--TVRYVDP- 128 (412)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHH----HTTTTTTC--EEEEECS-
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH----HHHHHcCC--EEEEECC-
Confidence 4556889999863 3667889999999999999999999999987765422100 01233454 4444332
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEE
Q 018300 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVT 309 (358)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~ 309 (358)
|++++++.+++ ++++|++..+++ |...|+++|.++|+++|+++++|++|+.+.. ...+++ ++|+++
T Consensus 129 ------~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~----~~~~~~~~~di~~ 197 (412)
T 2cb1_A 129 ------EPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGA----LCRPLAWGAHVVV 197 (412)
T ss_dssp ------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTT----SCCGGGGTCSEEE
T ss_pred ------CHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccc----cCCccccCCeEEE
Confidence 38999998864 788888866554 5688999999999999999999999986611 113444 799999
Q ss_pred EcCcCcCccCc---EEEEEEeC
Q 018300 310 TTTHKSLRGPR---GGMIFFKK 328 (358)
Q Consensus 310 ~S~hK~L~Gp~---GG~I~~~~ 328 (358)
+|+||++.||. ||+++.++
T Consensus 198 ~S~~K~~~~~~~~~G~~~~~~~ 219 (412)
T 2cb1_A 198 ESLTKWASGHGSVLGGAVLSRE 219 (412)
T ss_dssp EETTTTTTCSSCCCCEEEEECC
T ss_pred ECCcccccCCCCcEEEEEEecc
Confidence 99999998764 45555553
No 139
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.66 E-value=1.1e-15 Score=154.18 Aligned_cols=200 Identities=14% Similarity=0.054 Sum_probs=133.9
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh---
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--- 188 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--- 188 (358)
...++.|++++.....|... . .+...+...++|+.+++++++++|.+..+ ..+++++||+||..++.+.
T Consensus 110 ~~~~~~v~~~~~~~~~n~~~----~--~~~~~~~~~~le~~~~~~la~~~g~~~~~--~~~~t~ggt~a~~~al~~ar~~ 181 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQSM----D--SWDQASSATYVEQKVVNWLCDKYDLSEKA--DGIFTSGGTQSNQMGLMLARDW 181 (497)
T ss_dssp CCBHHHHHHHHHHHHHCCCT----T--CGGGCHHHHHHHHHHHHHHHHHTTCCTTC--EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhcccc----c--chhhChHHHHHHHHHHHHHHHHhCCCCCC--CeEEcCCchHHHHHHHHHHHHH
Confidence 45688888888665554311 1 12233456789999999999999996422 2456677888999988773
Q ss_pred -c---------cC------CC-EEEecCCCCCcccccccccchhccccCCceE-EEEeceecCCCCCCCHHHHHHHhhhc
Q 018300 189 -L---------KP------HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF 250 (358)
Q Consensus 189 -l---------~p------GD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~iD~d~le~~i~~~ 250 (358)
+ ++ || +|++++..|.+.. +.+...|... +++.++++ +++.+|+++|++.+++.
T Consensus 182 ~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~--------~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~ 252 (497)
T 2qma_A 182 IADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQ--------KSASWMGLGEKAVMTVDAN-ADGTMDITKLDEVIAQA 252 (497)
T ss_dssp HHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHH--------HHHHHTTSCGGGEEEECBC-TTSSBCGGGHHHHHHHH
T ss_pred HHHhhcccchhhcccccccCCeEEEECCCchHHHH--------HHHHHcCCCcccEEEEecC-CCCcCCHHHHHHHHHHH
Confidence 3 13 46 7888776554321 1223333311 23344455 46789999999988653
Q ss_pred ---CCe--EEEEcCCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCcc---CCCCCCcEEEEcCcCcCccCc
Q 018300 251 ---RPK--LIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPR 320 (358)
Q Consensus 251 ---~~k--lIi~~~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~---~pl~gaDiv~~S~hK~L~Gp~ 320 (358)
.++ +|++...+ .|...|+++|.++|+++|+++++|++|+.+..... .. ..++++|++++|+||++.+|.
T Consensus 253 ~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~ 331 (497)
T 2qma_A 253 KAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTI 331 (497)
T ss_dssp HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCS
T ss_pred HHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCc
Confidence 233 55554333 56788999999999999999999999986654322 11 112368999999999998886
Q ss_pred E-EEEEEeCC
Q 018300 321 G-GMIFFKKD 329 (358)
Q Consensus 321 G-G~I~~~~~ 329 (358)
+ |+++++++
T Consensus 332 ~~G~l~~~~~ 341 (497)
T 2qma_A 332 SCGALLVNDK 341 (497)
T ss_dssp SCEEEEESCG
T ss_pred ceEEEEEeCH
Confidence 4 88888765
No 140
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.65 E-value=2.1e-15 Score=150.45 Aligned_cols=235 Identities=12% Similarity=0.031 Sum_probs=145.5
Q ss_pred hhcccccccChHHHHHHHHHHHHhhhccccccc----CCCCcHHHHHHHhhhhhccc--CCCCCCCcCCCCcHHHHHHHH
Q 018300 78 FVDYSLGEADPEVCEIITKEKERQFKSLELIAS----ENFTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELET 151 (358)
Q Consensus 78 ~~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias----~n~~s~~V~~al~~~l~~~~--~~G~pg~r~~~G~~~~~~lE~ 151 (358)
+++++.+...+..+..+.+... ...-|+|-.+ +.++++.+.+++...+.+.. ..+|+. ..|. .++++
T Consensus 53 ~~s~~~~~~~~s~~~~~~~~~~-~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~---~~g~---~~lr~ 125 (448)
T 3aow_A 53 FFSKKALEMRASEVRELLKLVE-TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGT---TKGF---TPLRE 125 (448)
T ss_dssp GCCHHHHHCCCCHHHHHHHHHH-TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCC---TTCC---HHHHH
T ss_pred HhhHHHhcCCCcHHHHHHHhcc-CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCC---CCCc---HHHHH
Confidence 3455555555554433333221 2344555322 22367788888877665421 123322 1122 25666
Q ss_pred HHHHHHHHHcCC-CCCCCcceEEeC-CCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEec
Q 018300 152 LCQKRALAAFNL-DENKWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY 229 (358)
Q Consensus 152 ~~~~~la~lfg~-~~~~~~v~V~~~-SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~ 229 (358)
.+.+++.+.+|. +++ +|+++ +|++|+..++.++++|||+|++.++.|.++.. .+...|. +++.+
T Consensus 126 ~ia~~~~~~~g~~~~~----~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v 191 (448)
T 3aow_A 126 TLMKWLGKRYGISQDN----DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ--------AFNFYEP--QYIQI 191 (448)
T ss_dssp HHHHHHHHHHCCCTTS----EEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCC--EEEEE
T ss_pred HHHHHHHHhcCcCChh----hEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEe
Confidence 666666666698 442 34445 45679999999999999999999876655421 2334565 44555
Q ss_pred eecCCCCCCCHHHHHHHhh----h-cCCeEEEE-cCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 230 RLDESTGLVDYDMLEKTAI----L-FRPKLIIA-GASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 230 ~~~~~~~~iD~d~le~~i~----~-~~~klIi~-~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
+.++ + .+|+++|++.++ . .++|+|++ ..+++ |...+ +++|.++|+++|++||+|++|+.+ ...+..
T Consensus 192 ~~~~-~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~-~~~g~~ 268 (448)
T 3aow_A 192 PLDD-E-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGEL-RYSGNP 268 (448)
T ss_dssp EEET-T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTC-BCSSCC
T ss_pred ccCC-C-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccc-cCCCCC
Confidence 5664 2 389999999886 3 26888754 44444 44555 578999999999999999998754 333321
Q ss_pred cCCC---C--CCcEEEEcCcCcCc-cCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 299 ADPF---K--YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 299 ~~pl---~--gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+.++ + +.++++.|++|+|+ |.|.|++++++ ++.+++..
T Consensus 269 ~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~------~l~~~l~~ 312 (448)
T 3aow_A 269 EKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDP------GIIRKMEI 312 (448)
T ss_dssp CCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECH------HHHHHHHH
T ss_pred CcCHHhcCCCCCEEEEccchhhccccccEEEEEeCH------HHHHHHHH
Confidence 1122 2 45688999999985 45679999986 45555543
No 141
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.65 E-value=4.4e-16 Score=151.99 Aligned_cols=191 Identities=17% Similarity=0.140 Sum_probs=124.3
Q ss_pred CCCCcHHHHHHHhhhhhcccCCCCCCC--cCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh
Q 018300 111 ENFTSRAVMEAVGSCLTNKYSEGLPGK--RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 111 ~n~~s~~V~~al~~~l~~~~~~G~pg~--r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
..+.++.|++++...+...+ +++.. ++..+.. +.++ .+++++++++|+++++ .+++.+|+.++..++.++
T Consensus 37 ~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~~--~~~~-~l~~~la~~~g~~~~~---v~~~~g~t~al~~al~~~ 108 (416)
T 1qz9_A 37 LGARPVAALARAQAVIAEEW--GNGLIRSWNSAGWR--DLSE-RLGNRLATLIGARDGE---VVVTDTTSINLFKVLSAA 108 (416)
T ss_dssp SCCCBTTHHHHHHHHHHTCC--CCCGGGHHHHTSGG--GHHH-HHHHHHHTTTTCCTTS---EEECSCHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHH--hccCccccchhhHH--HHHH-HHHHHHHHHcCCCccc---EEEeCChhHHHHHHHHhh
Confidence 34678899999988776543 22221 1111211 2233 3677899999997532 233445566887888877
Q ss_pred c------cCCCEE-EecCCCCCcccccccccchhccccC--CceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 189 L------KPHDRI-MGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 189 l------~pGD~V-l~~~~~~ggh~s~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
+ +|||+| ++.+..|+++..... ...... |. +++.+++ +++|++.+.. ++++|++..
T Consensus 109 ~~~~~~~~~gd~vii~~~~~~~~~~~~~~----~~~~~~~~g~--~~~~v~~--------~~~l~~~i~~-~~~~v~~~~ 173 (416)
T 1qz9_A 109 LRVQATRSPERRVIVTETSNFPTDLYIAE----GLADMLQQGY--TLRLVDS--------PEELPQAIDQ-DTAVVMLTH 173 (416)
T ss_dssp HHHHHHHSTTCCEEEEETTSCHHHHHHHH----HHHHHHCSSC--EEEEESS--------GGGHHHHCST-TEEEEEEES
T ss_pred cccccccCCCCcEEEEcCCCCCchHHHHH----HHHHHhcCCc--eEEEeCc--------HHHHHHHhCC-CceEEEEec
Confidence 5 899975 444445544321000 001112 54 3444322 6788888764 788888766
Q ss_pred CCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcC-ccCcE-EEEEEeCC
Q 018300 260 SAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRG-GMIFFKKD 329 (358)
Q Consensus 260 s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L-~Gp~G-G~I~~~~~ 329 (358)
+++ |...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||+| +|+++ |+++++++
T Consensus 174 ~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~ 244 (416)
T 1qz9_A 174 VNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAV-----PVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQ 244 (416)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTT
T ss_pred cccCcccccCHHHHHHHHHHcCCEEEEEccccccCc-----CCChhhcCCCEEEecCcccCCCCCCCeEEEEECHH
Confidence 554 6688999999999999999999999986543 22232 6899999999997 56788 99999875
No 142
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.65 E-value=4.1e-15 Score=145.49 Aligned_cols=222 Identities=9% Similarity=0.040 Sum_probs=134.6
Q ss_pred ccChHHHHHHHHHHHHhh-----hccccccc-------CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHH
Q 018300 85 EADPEVCEIITKEKERQF-----KSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETL 152 (358)
Q Consensus 85 ~~d~~~~~~i~~e~~~~~-----~~i~lias-------~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~ 152 (358)
..+..++.++++.+.... +-+++-.+ +..+++.|.+++...... ...+|+. ..|.. ++++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~---~~g~~---~lr~~ 87 (413)
T 3t18_A 15 NGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAP---IEGEK---DYRKI 87 (413)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCC---TTCCH---HHHHH
T ss_pred CCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCC---CCCCH---HHHHH
Confidence 445556666655433222 33444322 335788899988653221 1123332 12333 45555
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (358)
+.+++....+.+..+ ..+++.+|++|+..++.++++|||+|+++++.|.++.. .+...|. ++++++++
T Consensus 88 la~~~~~~~~~~~~~--~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~ 155 (413)
T 3t18_A 88 VIDTLFGPYKPEGYI--SAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRK--------ICEEFGR--NFKTFEFF 155 (413)
T ss_dssp HHHHHHGGGCCSSEE--EEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHH--------HHHHHTC--EEEEECCB
T ss_pred HHHHHhcccCccccC--cEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHH--------HHHHhCC--eEEEeecc
Confidence 555555554443211 12445566779999999999999999999886655422 2334565 44555564
Q ss_pred CCCCCCCHHHHHHHhhhc---CCe-EEEEcCC-CC--CCCCCHHHH---HHHHH------HcCCEEEEeccccccccccC
Q 018300 233 ESTGLVDYDMLEKTAILF---RPK-LIIAGAS-AY--PRDFDYPRM---RQIAD------AVGALLMMDMAHISGLVAAS 296 (358)
Q Consensus 233 ~~~~~iD~d~le~~i~~~---~~k-lIi~~~s-~~--~~~~dl~~I---~~ia~------e~g~~livD~Ah~~Gl~~~g 296 (358)
++++.+|+++|++.++.. +++ +++++.+ ++ |...+.+++ +++|+ ++|++|++|++|. ++...+
T Consensus 156 ~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~-~~~~~~ 234 (413)
T 3t18_A 156 TDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYL-EFAGDG 234 (413)
T ss_dssp CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTG-GGSSSS
T ss_pred CCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccc-cccCCh
Confidence 345689999999988652 567 6777655 44 556775554 45565 8999999999974 555444
Q ss_pred CccCCC-C---C--Cc---EEEEcCcCcC--ccCcEEEEEE
Q 018300 297 VVADPF-K---Y--CD---VVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 297 ~~~~pl-~---g--aD---iv~~S~hK~L--~Gp~GG~I~~ 326 (358)
....++ . + .| +++.|++|++ +|.|.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~ 275 (413)
T 3t18_A 235 DQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVG 275 (413)
T ss_dssp STTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEE
T ss_pred hhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEE
Confidence 211111 1 1 22 7788999997 4667799988
No 143
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.64 E-value=7.7e-16 Score=147.44 Aligned_cols=205 Identities=14% Similarity=0.101 Sum_probs=131.3
Q ss_pred ccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHH
Q 018300 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (358)
Q Consensus 105 i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a 184 (358)
-.|..+.++..+.+++++...+. +..+...|+..+...+++ +++++++|.+. .++++||+.|+..+
T Consensus 13 ~~l~~~~~p~~~~~~~~~~~~~~-----~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~a 78 (357)
T 3lws_A 13 TGQISGHGKRNVGVLKTAFAAVA-----DEMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVA 78 (357)
T ss_dssp SEESSBSSCCBHHHHHHHHTTSC-----TTCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHHHHhh-----cccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHH
Confidence 34556777777777766654221 111222333334444444 45888999865 36678999999999
Q ss_pred HHHhccCCC--EEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 018300 185 YTAILKPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (358)
Q Consensus 185 ~~all~pGD--~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~ 262 (358)
+.++++||| .|++.+..|....... ......|. ++++++. +++.+|++++++.. ++++|++..+++
T Consensus 79 l~~~~~~gd~~~vi~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~--~~~~~d~~~l~~~~---~~~~v~~~~p~n 146 (357)
T 3lws_A 79 LRIWSDETDNRTVAYHPLCHLEIHEQD-----GLKELHPI--ETILVGA--ADRLMTLDEIKALP---DIACLLLELPQR 146 (357)
T ss_dssp HHHHHHHHTCCEEEECTTCHHHHSSTT-----HHHHHSSC--EEEECSC--TTSCCCHHHHHTCC---SCSEEEEESSBG
T ss_pred HHHHhhcCCCcEEEecccceeeeeccc-----hhhhccCc--EEEEecC--CCCCcCHHHHhcCc---CcceEEEEcccc
Confidence 999999998 6776554322211100 01223354 4455443 45689999999863 388888876653
Q ss_pred ---CCCC---CHHHHHHHHHHcCCEEEEeccccccccc-cCCccCCC-CCCcEEEEcCcCcCccCcEEEEEEeCCCCchh
Q 018300 263 ---PRDF---DYPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 334 (358)
Q Consensus 263 ---~~~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~-~g~~~~pl-~gaDiv~~S~hK~L~Gp~GG~I~~~~~~~~~~ 334 (358)
|... ++++|.++|+++|++|++|++|..+... .+.....+ .++|++++|+||+|+||.||+++.++
T Consensus 147 p~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~------ 220 (357)
T 3lws_A 147 EIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPA------ 220 (357)
T ss_dssp GGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECH------
T ss_pred cCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCH------
Confidence 5555 4889999999999999999998733211 11111112 26799999999999899999998876
Q ss_pred HHHHHHh
Q 018300 335 ELESAIN 341 (358)
Q Consensus 335 ~~~~~i~ 341 (358)
++.+++.
T Consensus 221 ~~~~~~~ 227 (357)
T 3lws_A 221 AFCQTAR 227 (357)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555554
No 144
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.64 E-value=1.2e-15 Score=153.24 Aligned_cols=197 Identities=14% Similarity=0.062 Sum_probs=131.6
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCC------CcceEEeCCCHHHHHHHHHHh
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~------~~v~V~~~SGt~A~~~a~~al 188 (358)
+..+.+++...+ +.+..+ |...+...++|+.+++++++++|.+... .+..+++.+||+||+.++.++
T Consensus 87 ~~~~~~~~~~~~-n~~~~~------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~ 159 (486)
T 1js3_A 87 PAMLADMLCGAI-GCIGFS------WAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAA 159 (486)
T ss_dssp HHHHHHHHHHHH-CCCCSS------GGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CcCccc------cccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHH
Confidence 444666666554 332211 2233556789999999999999998521 012356778889999988775
Q ss_pred ccC---------CC--------E--EEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh
Q 018300 189 LKP---------HD--------R--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL 249 (358)
Q Consensus 189 l~p---------GD--------~--Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~ 249 (358)
..+ || + |+++++.|.+. . +.+...|.. ++.++++ +++.+|+++|++.+++
T Consensus 160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~---~-----~~~~~~G~~--v~~v~~d-~~~~~d~~~L~~~i~~ 228 (486)
T 1js3_A 160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSV---E-----RAGLIGGVK--LKAIPSD-GKFAMRASALQEALER 228 (486)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHH---H-----HHHHHHTCE--EEEECCC-TTSCCCHHHHHHHHHH
T ss_pred HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHH---H-----HHHHhCCCc--eEEeecC-CCCCCCHHHHHHHHHH
Confidence 321 53 3 66676644332 1 234455764 4445565 4679999999999865
Q ss_pred cC-----CeEEEEcCC--CCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccC---CCCCCcEEEEcCcCcCccC
Q 018300 250 FR-----PKLIIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD---PFKYCDVVTTTTHKSLRGP 319 (358)
Q Consensus 250 ~~-----~klIi~~~s--~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~---pl~gaDiv~~S~hK~L~Gp 319 (358)
.+ |.+|++..+ .+|...|+++|.++|+++|+++++|+||+.+....+.... .++++|++++++||++.+|
T Consensus 229 ~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p 308 (486)
T 1js3_A 229 DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN 308 (486)
T ss_dssp HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC
T ss_pred HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC
Confidence 32 236655443 3577889999999999999999999999866543221111 1237899999999999877
Q ss_pred cE-EEEEEeCC
Q 018300 320 RG-GMIFFKKD 329 (358)
Q Consensus 320 ~G-G~I~~~~~ 329 (358)
.+ |+++++++
T Consensus 309 ~~~G~l~~~~~ 319 (486)
T 1js3_A 309 FDCSAMWVKRR 319 (486)
T ss_dssp SSCEEEEESCH
T ss_pred cceEEEEEeCH
Confidence 54 88888775
No 145
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.64 E-value=2.4e-16 Score=151.50 Aligned_cols=201 Identities=13% Similarity=0.075 Sum_probs=127.9
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCC-CCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCCHHHH
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPAN 181 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~p-g~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~-~SGt~A~ 181 (358)
.+.+.+++..+|+.|++++...+.+.+..|.. ....+.+... .++.+.+++++++++|++.+ .. .+++ .+|++|+
T Consensus 5 ~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~la~~~g~~~~-~~-~i~~t~g~t~a~ 81 (362)
T 2c0r_A 5 AYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVY-EAVHNEAQARLLALLGNPTG-YK-VLFIQGGASTQF 81 (362)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHH-HHHHHHHHHHHHHHTTCCSS-EE-EEEESSHHHHHH
T ss_pred eeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHH-HHHHHHHHHHHHHHhCCCCC-cE-EEEECCCchHHH
Confidence 35667888999999999998877543221111 0001112333 33444588999999999752 11 2344 5677899
Q ss_pred HHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC-CCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-LVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~iD~d~le~~i~~~~~klIi~~~s 260 (358)
..++.++++|||+|+++++ +++.+.+. ..+...| .+..++++.+.+.+ .+|.++++ +. .++|+|++..+
T Consensus 82 ~~~~~~l~~~gd~vl~~~~---~~~~~~~~---~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~-~~t~~v~~~~~ 151 (362)
T 2c0r_A 82 AMIPMNFLKEGQTANYVMT---GSWASKAL---KEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ-DNAAYLHLTSN 151 (362)
T ss_dssp HHHHHHHCCTTCEEEEEEC---SHHHHHHH---HHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-TTEEEEEEESE
T ss_pred HHHHHhcCCCCCeEEEEec---CcHhHHHH---HHHHHhC-CeEEEecccccccccCCCHHHcc--cC-CCcCEEEEeCC
Confidence 9999999999999988754 23332110 1223346 55555543211122 46776654 43 36888877654
Q ss_pred C--CCCC-CCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 261 A--YPRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 261 ~--~~~~-~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+ +|.. .|+++| +|+++++|++|+.|.. +.++...|++++|+||++ ||.| |+++++++
T Consensus 152 ~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~-----~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~ 212 (362)
T 2c0r_A 152 ETIEGAQFKAFPDT------GSVPLIGDMSSDILSR-----PFDLNQFGLVYAGAQKNL-GPSGVTVVIVRED 212 (362)
T ss_dssp ETTTTEECSSCCCC------TTSCEEEECTTTTTSS-----CCCGGGCSEEEEETTTTT-CCSSCEEEEEEGG
T ss_pred cCccceeccccccc------CCCEEEEEChhhccCC-----ccchhHCcEEEEeccccc-cCcCcEEEEEcHH
Confidence 4 3443 567766 8999999999987642 222334599999999998 5877 99999875
No 146
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.64 E-value=3e-16 Score=165.82 Aligned_cols=164 Identities=15% Similarity=0.088 Sum_probs=116.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhc-cccCCceEEEEece
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGTSIYFESMPYR 230 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~-~~~~g~~~~~~~~~ 230 (358)
++++++++||++. .+++++|+ .||.+++.++++|||+|++..+.|.++.. . +.+.|..+..++..
T Consensus 178 ~e~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~--------~~~~l~Ga~~v~v~~~ 244 (730)
T 1c4k_A 178 AEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYN--------SALAMAGGRPVYLQTN 244 (730)
T ss_dssp HHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHTTTTCCEEEEECEE
T ss_pred HHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHH--------HHHHHCCCEEEEEeCC
Confidence 5677999999986 25667776 69999999999999999999876654321 2 34566644333322
Q ss_pred ecCC--CCCCCHHHH-----HHHhhhcC-----C----eEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEEecccccccc
Q 018300 231 LDES--TGLVDYDML-----EKTAILFR-----P----KLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLV 293 (358)
Q Consensus 231 ~~~~--~~~iD~d~l-----e~~i~~~~-----~----klIi~~~s~-~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~ 293 (358)
.+.. .+.+|+++| ++.+++.. + |+|++..++ +|...|+++|+++|+++|++|++|+||+.++.
T Consensus 245 ~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~ 324 (730)
T 1c4k_A 245 RNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQ 324 (730)
T ss_dssp ECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGG
T ss_pred ccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccccccc
Confidence 2100 123677777 88876531 3 777775544 57788999999999999999999999986654
Q ss_pred ccCCcc--CCCC----CCc----EEEEcCcCcCccCc-EEEEEEeCC
Q 018300 294 AASVVA--DPFK----YCD----VVTTTTHKSLRGPR-GGMIFFKKD 329 (358)
Q Consensus 294 ~~g~~~--~pl~----gaD----iv~~S~hK~L~Gp~-GG~I~~~~~ 329 (358)
+.+..+ ++++ ++| ++++|+||+|+||+ ||+|+.+++
T Consensus 325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~ 371 (730)
T 1c4k_A 325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDS 371 (730)
T ss_dssp SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECG
T ss_pred cCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecch
Confidence 433221 2332 678 99999999999987 478877765
No 147
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.64 E-value=3.9e-15 Score=145.66 Aligned_cols=197 Identities=17% Similarity=0.113 Sum_probs=128.0
Q ss_pred CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHc------C--CCCCCCcceEEeCCCHHHHHH
Q 018300 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF------N--LDENKWGVNVQPLSGSPANFE 183 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lf------g--~~~~~~~v~V~~~SGt~A~~~ 183 (358)
..+++.|++++...+......+|+. ..|. .++++.+.+++.+.| | ++.+ ..+++++|++|+..
T Consensus 49 ~~~~~~v~~a~~~~~~~~~~~~y~~---~~~~---~~lr~~la~~~~~~~~~~~~~~~~~~~~---~v~~~~g~~~al~~ 119 (416)
T 1bw0_A 49 LLTSAAQIKKLKEAIDSQECNGYFP---TVGS---PEAREAVATWWRNSFVHKEELKSTIVKD---NVVLCSGGSHGILM 119 (416)
T ss_dssp SCCCHHHHHHHHHHHHTTCSSSCCC---TTCC---HHHHHHHHHHHHHHHCCSTTTGGGCCGG---GEEEESHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhhCCccCCcCC---CCCC---HHHHHHHHHHHHhhhcccccCCCCCCcc---eEEEeCChHHHHHH
Confidence 4578999999988775432223432 1122 245554444444221 1 3432 23444556779999
Q ss_pred HHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 018300 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAY 262 (358)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~~~klIi~~~s~~ 262 (358)
++.++++|||+|++.++.|.++.. .+...|.. ++.++++++ ++.+|+++|++.++. ++++|++..+++
T Consensus 120 ~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~n 188 (416)
T 1bw0_A 120 AITAICDAGDYALVPQPGFPHYET--------VCKAYGIG--MHFYNCRPENDWEADLDEIRRLKDD-KTKLLIVTNPSN 188 (416)
T ss_dssp HHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCE--EEEEEEEGGGTTEECHHHHHHHCCT-TEEEEEEESSCT
T ss_pred HHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCcE--EEEeecCcccCCCCCHHHHHHHhcc-CCeEEEEeCCCC
Confidence 999999999999999887665421 23345654 444445433 346899999998864 577776655554
Q ss_pred --CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCC----ccCCC---C--CCcEEEEcCcCcC--ccCcEEEEEE
Q 018300 263 --PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV----VADPF---K--YCDVVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 263 --~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~----~~~pl---~--gaDiv~~S~hK~L--~Gp~GG~I~~ 326 (358)
|...+ +++|.++|+++|++|++|++|+. +...+. ...++ + ..++++.|++|++ +|.|.|++++
T Consensus 189 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~ 267 (416)
T 1bw0_A 189 PCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAG-MVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLY 267 (416)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTT-CBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEE
T ss_pred CCCcccCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEe
Confidence 45677 89999999999999999999885 443332 11122 2 2247789999996 5667899998
Q ss_pred eCC
Q 018300 327 KKD 329 (358)
Q Consensus 327 ~~~ 329 (358)
+++
T Consensus 268 ~~~ 270 (416)
T 1bw0_A 268 VDP 270 (416)
T ss_dssp ECT
T ss_pred eCc
Confidence 774
No 148
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.64 E-value=6.4e-15 Score=144.96 Aligned_cols=176 Identities=14% Similarity=0.096 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCcceEEeCC-CHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCc
Q 018300 148 ELETLCQKRALAAFN----LDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 148 ~lE~~~~~~la~lfg----~~~~~~~v~V~~~S-Gt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
++++.+.+++.+.+| ++++ +|++++ +++|+..++.++++|||+|+++++.|.++... .....|.
T Consensus 87 ~lr~~la~~~~~~~g~~~~~~~~----~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~-------~~~~~g~ 155 (428)
T 1iay_A 87 EFRKAIAKFMEKTRGGRVRFDPE----RVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRD-------LRWRTGV 155 (428)
T ss_dssp HHHHHHHHHHHHHTTTCSCCCTT----SCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHH-------TTTTTCC
T ss_pred HHHHHHHHHHHHhcCCCCCCChh----hEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHH-------HHHhcCC
Confidence 566666666666666 4443 244444 55799999999999999999999877664210 1123455
Q ss_pred eEEEEeceecCC-CCCCCHHHHHHHhhh-----cCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEecccccc
Q 018300 223 YFESMPYRLDES-TGLVDYDMLEKTAIL-----FRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 223 ~~~~~~~~~~~~-~~~iD~d~le~~i~~-----~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~G 291 (358)
++++++.+++ +..+|++++++.++. .++++|++..+++ |...+ +++|.++|+++|++|++|++|..+
T Consensus 156 --~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 233 (428)
T 1iay_A 156 --QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAAT 233 (428)
T ss_dssp --EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGG
T ss_pred --EEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccccc
Confidence 4455555533 336899999988764 2578777655554 56778 899999999999999999999743
Q ss_pred ccccCC-ccC--CCC-C-------Cc--EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 292 LVAASV-VAD--PFK-Y-------CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 292 l~~~g~-~~~--pl~-g-------aD--iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
...+. .++ .+. . .| +++.|+||+| +|.|.|++++.++ ++.+++..
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~-----~~~~~~~~ 293 (428)
T 1iay_A 234 -VFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFND-----DVVNCARK 293 (428)
T ss_dssp -CCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCH-----HHHHHHHH
T ss_pred -ccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCH-----HHHHHHHH
Confidence 32221 111 111 2 68 8899999998 5677899998543 56665554
No 149
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.64 E-value=2.1e-15 Score=149.56 Aligned_cols=192 Identities=17% Similarity=0.121 Sum_probs=126.4
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccCC
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~pG 192 (358)
.+++.+++++... . . .|...+...++ ++.+++++|.+. .++++||++|+..++.++++||
T Consensus 55 ~~~~~~~~a~~~~-~----~------~y~~~~~~~~l----~~~la~~~~~~~-----~~~~~~gt~a~~~al~~l~~~g 114 (456)
T 2ez2_A 55 AMSDKQWAGMMMG-D----E------AYAGSENFYHL----ERTVQELFGFKH-----IVPTHQGRGAENLLSQLAIKPG 114 (456)
T ss_dssp CCCHHHHHHHTTC-C----C------CSSSCHHHHHH----HHHHHHHHCCSE-----EEEESSHHHHHHHHHHHHCCTT
T ss_pred cCCHHHHHHhhcc-h----h------hcccChhHHHH----HHHHHHHhCCCc-----EEEeCCcHHHHHHHHHHhCCCC
Confidence 4578888887521 0 1 12233333444 455788898764 4667889999999999999999
Q ss_pred CEEEecCCCC-CcccccccccchhccccCCceEEEEeceecC----C-----CCCCCHHHHHHHhhhcC---CeEEEEcC
Q 018300 193 DRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDE----S-----TGLVDYDMLEKTAILFR---PKLIIAGA 259 (358)
Q Consensus 193 D~Vl~~~~~~-ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~----~-----~~~iD~d~le~~i~~~~---~klIi~~~ 259 (358)
| +++++.| +.+. ..+...|. +++.+++++ + ++.+|+++|++.+++.. +++|++..
T Consensus 115 d--i~~~~~~~~~~~--------~~~~~~G~--~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~ 182 (456)
T 2ez2_A 115 Q--YVAGNMYFTTTR--------YHQEKNGA--VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAV 182 (456)
T ss_dssp C--EEEESSCCHHHH--------HHHHHTTC--EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEES
T ss_pred C--EeccccccchhH--------HHHHHcCC--EEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEec
Confidence 9 5555544 2211 13345565 445555552 2 25789999999887532 37777764
Q ss_pred CC---CCCCCC---HHHHHHHHHHcCCEEEEecccccc---------ccccCCccC----CC-CCCcEEEEcCcCcCccC
Q 018300 260 SA---YPRDFD---YPRMRQIADAVGALLMMDMAHISG---------LVAASVVAD----PF-KYCDVVTTTTHKSLRGP 319 (358)
Q Consensus 260 s~---~~~~~d---l~~I~~ia~e~g~~livD~Ah~~G---------l~~~g~~~~----pl-~gaDiv~~S~hK~L~Gp 319 (358)
++ +|...+ +++|.++|+++|++|++|++|+.| +...+.... .+ ...|++++|+||++..+
T Consensus 183 p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~ 262 (456)
T 2ez2_A 183 TVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVN 262 (456)
T ss_dssp SBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCS
T ss_pred cCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCC
Confidence 43 345666 999999999999999999999875 333332100 01 25799888999986656
Q ss_pred cEEEEEEeCCCCchhHHHHHHh
Q 018300 320 RGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 320 ~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+||+++++++ ++.+++.
T Consensus 263 ~gG~~~~~~~-----~~~~~~~ 279 (456)
T 2ez2_A 263 IGGFLCMNDD-----EMFSSAK 279 (456)
T ss_dssp SCEEEEESCH-----HHHHHHH
T ss_pred ceeEEEECCH-----HHHHHHH
Confidence 7899998544 5555543
No 150
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.64 E-value=1.7e-15 Score=147.47 Aligned_cols=196 Identities=15% Similarity=0.044 Sum_probs=127.0
Q ss_pred CcHHHHHHHhhhhhccc--CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-CHHHHHHHHHHhcc
Q 018300 114 TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILK 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~--~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~S-Gt~A~~~a~~all~ 190 (358)
.++.+.+++...+.... ..+|+.. .|. .++ ++.+++++|++++ +|.+++ |++|+..++.++++
T Consensus 48 ~~~~v~~a~~~~~~~~~~~~~~y~~~---~~~---~~l----~~~la~~~g~~~~----~v~~~~g~~~al~~~~~~~~~ 113 (397)
T 2zyj_A 48 PKEEAAEAAARILREKGEVALQYSPT---EGY---APL----RAFVAEWIGVRPE----EVLITTGSQQALDLVGKVFLD 113 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCCT---TCC---HHH----HHHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhcchhhhCCCCC---CCC---HHH----HHHHHHHhCCChh----hEEEeccHHHHHHHHHHHhCC
Confidence 57789998877765321 1233221 122 234 4457778887653 344444 56699999999999
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEE-EcCCCC--CCCCC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGASAY--PRDFD 267 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi-~~~s~~--~~~~d 267 (358)
|||+|++.++.|.++.. .+...|. +++.++.++ ++ +|++++++.++..++++|+ +..+++ |...+
T Consensus 114 ~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~-~~-~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~ 181 (397)
T 2zyj_A 114 EGSPVLLEAPSYMGAIQ--------AFRLQGP--RFLTVPAGE-EG-PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTP 181 (397)
T ss_dssp TTCEEEEEESCCHHHHH--------HHHTTCC--EEEEEEEET-TE-ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCC
T ss_pred CCCEEEEeCCCcHHHHH--------HHHHcCC--EEEecCcCC-CC-CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCC
Confidence 99999998876655321 2334565 344555554 33 8999999988755788874 444444 45666
Q ss_pred ---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCc------EEEEcCcCcCc-cCcEEEEEEeCCCCchhH
Q 018300 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD------VVTTTTHKSLR-GPRGGMIFFKKDPVLGVE 335 (358)
Q Consensus 268 ---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaD------iv~~S~hK~L~-Gp~GG~I~~~~~~~~~~~ 335 (358)
+++|.++|+++|+++++|++|+.+. ..+..+.++. +.| +++.|+||+++ |.+.|++++++ +
T Consensus 182 ~~~l~~l~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~------~ 254 (397)
T 2zyj_A 182 LPARKRLLQMVMERGLVVVEDDAYRELY-FGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHP------E 254 (397)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECTTTTCB-CSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCH------H
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCccccc-CCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCH------H
Confidence 4589999999999999999998543 2232111221 223 88999999986 44669999886 4
Q ss_pred HHHHHhh
Q 018300 336 LESAINN 342 (358)
Q Consensus 336 ~~~~i~~ 342 (358)
+.+++..
T Consensus 255 ~~~~l~~ 261 (397)
T 2zyj_A 255 ALQKLVQ 261 (397)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 151
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.64 E-value=2.5e-15 Score=148.32 Aligned_cols=176 Identities=16% Similarity=0.100 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccc-cCCc
Q 018300 148 ELETLCQKRALAAFN----LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSI 222 (358)
Q Consensus 148 ~lE~~~~~~la~lfg----~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~-~~g~ 222 (358)
++++.+.+++.+.++ ++.+ ..+++++|++|+..++.++++|||+|++.++.|.++.. .+. ..|.
T Consensus 90 ~l~~~la~~~~~~~~~~~~~~~~---~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~ 158 (435)
T 3piu_A 90 AFKKAMVDFMAEIRGNKVTFDPN---HLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTGV 158 (435)
T ss_dssp HHHHHHHHHHHHHTTTSSCCCGG---GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTCC
T ss_pred HHHHHHHHHHHHhhCCCCCCCHH---HEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH--------HHHHhcCC
Confidence 566665555554444 4443 23455567789999999999999999999887665432 222 4565
Q ss_pred eEEEEeceecCCC-CCCCHHHHHHHhhh-----cCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEecccccc
Q 018300 223 YFESMPYRLDEST-GLVDYDMLEKTAIL-----FRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 223 ~~~~~~~~~~~~~-~~iD~d~le~~i~~-----~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~G 291 (358)
++++++.++++ ..+|+++|++.+++ .++++|++..+++ |...+ +++|.++|+++|+++++|++|+.+
T Consensus 159 --~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 236 (435)
T 3piu_A 159 --EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGT 236 (435)
T ss_dssp --EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG
T ss_pred --EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccccc
Confidence 44555555332 36899999998865 2678887765555 44544 578889999999999999999744
Q ss_pred ccccCCccCCC-C-----C-------Cc--EEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 292 LVAASVVADPF-K-----Y-------CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 292 l~~~g~~~~pl-~-----g-------aD--iv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
...+....++ . + .| +++.|+||+| +|.+.|+++++++ ++.+.+..
T Consensus 237 -~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~-----~~~~~~~~ 298 (435)
T 3piu_A 237 -AFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDD-----MVVAAATK 298 (435)
T ss_dssp -CCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCH-----HHHHHHHH
T ss_pred -ccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCH-----HHHHHHHH
Confidence 3332211111 1 1 22 8889999998 5678899999664 56555544
No 152
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.63 E-value=2.1e-15 Score=148.56 Aligned_cols=199 Identities=18% Similarity=0.102 Sum_probs=130.7
Q ss_pred CcHHHHHHHhhhhhccc--CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC---CCCCCCcceEEeCC-CHHHHHHHHHH
Q 018300 114 TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLS-GSPANFEVYTA 187 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~--~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg---~~~~~~~v~V~~~S-Gt~A~~~a~~a 187 (358)
+++.+.+++...+.... ..+|+.. .|. .++++.+.+++.+.+| ++++ +|.+++ |++|+..++.+
T Consensus 59 ~~~~v~~a~~~~~~~~~~~~~~y~~~---~g~---~~lr~~la~~l~~~~g~~~~~~~----~v~~t~G~~~al~~~~~~ 128 (425)
T 1vp4_A 59 PRKELAEIAKEIIEKEYHYTLQYSTT---EGD---PVLKQQILKLLERMYGITGLDED----NLIFTVGSQQALDLIGKL 128 (425)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTSCCCT---TCC---HHHHHHHHHHHHHHHCCCSCCGG----GEEEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcchhhcCCCCC---CCC---HHHHHHHHHHHHhccCCCCCCcc----cEEEeccHHHHHHHHHHH
Confidence 56788998887765321 1233321 122 3566666666666668 4443 344454 56799999999
Q ss_pred hccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh-------cCCeEEE-EcC
Q 018300 188 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-------FRPKLII-AGA 259 (358)
Q Consensus 188 ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~-------~~~klIi-~~~ 259 (358)
+++|||+|++.++.|.++.. .+...|. +++++++++ + .+|+++|++.++. .++++|+ +..
T Consensus 129 l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~ 196 (425)
T 1vp4_A 129 FLDDESYCVLDDPAYLGAIN--------AFRQYLA--NFVVVPLED-D-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSN 196 (425)
T ss_dssp HCCTTCEEEEEESCCHHHHH--------HHHTTTC--EEEEEEEET-T-EECHHHHHHHHHHHHHTTCGGGEEEEEEECS
T ss_pred hCCCCCEEEEeCCCcHHHHH--------HHHHcCC--EEEEeccCC-C-CCCHHHHHHHHHhhhhcccCCCceEEEECCC
Confidence 99999999998876655321 2334565 344555654 3 3899999998865 2678874 555
Q ss_pred CCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C--CCcEEEEcCcCcCc-cCcEEEEEEeC
Q 018300 260 SAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSLR-GPRGGMIFFKK 328 (358)
Q Consensus 260 s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~--gaDiv~~S~hK~L~-Gp~GG~I~~~~ 328 (358)
+++ |...+ +++|.++|+++|+++++|++|+.. ...+..+.++ + +.++++.|++|+++ |.|.|++++++
T Consensus 197 ~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 275 (425)
T 1vp4_A 197 FHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGAL-RYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSK 275 (425)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTC-BCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccc-cCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCH
Confidence 554 44554 678999999999999999998743 3333211222 1 45688999999985 55679999986
Q ss_pred CCCchhHHHHHHh
Q 018300 329 DPVLGVELESAIN 341 (358)
Q Consensus 329 ~~~~~~~~~~~i~ 341 (358)
++.+++.
T Consensus 276 ------~~~~~l~ 282 (425)
T 1vp4_A 276 ------EFIRKIV 282 (425)
T ss_dssp ------HHHHHHH
T ss_pred ------HHHHHHH
Confidence 4555554
No 153
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.63 E-value=1.7e-15 Score=145.94 Aligned_cols=167 Identities=16% Similarity=0.170 Sum_probs=117.8
Q ss_pred HHHHHHc-CCCCCCCcceEEeCCCHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC
Q 018300 155 KRALAAF-NLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (358)
Q Consensus 155 ~~la~lf-g~~~~~~~v~V~~~SGt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (358)
+.+++++ +++++ ..+.+++|+.|+..++.++++|||+|++.++.|.++.. .+...|.. ++.+++++
T Consensus 70 ~~la~~~~~~~~~---~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~--~~~v~~~~ 136 (375)
T 3op7_A 70 KSVSQLYTGVKPE---QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD--------IPKSLGAE--VDLWQIEE 136 (375)
T ss_dssp HHHHTTSSSCCGG---GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH--------HHHHTTCE--EEEEEEEG
T ss_pred HHHHHHhccCChh---hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCE--EEEEeccc
Confidence 3466776 45543 23555667889999999999999999999876655421 23445654 44444553
Q ss_pred C-CCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CC
Q 018300 234 S-TGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YC 305 (358)
Q Consensus 234 ~-~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--ga 305 (358)
+ +..+|++++++.++. ++++|++..+++ |...| +++|.++|+++|+++++|++|... ...+ .+...+ +.
T Consensus 137 ~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~-~~~~-~~~~~~~~~~ 213 (375)
T 3op7_A 137 ENGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF-SELD-VPSIIEVYDK 213 (375)
T ss_dssp GGTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC-SSSC-CCCHHHHCTT
T ss_pred cCCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccC-CCchhhhcCC
Confidence 2 346899999999864 789888866554 55778 999999999999999999998743 2221 111112 45
Q ss_pred cEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 306 Div~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
++++.|++|++ +|.++|++++++ ++.+++...
T Consensus 214 ~i~~~s~sK~~~~~G~r~G~v~~~~------~l~~~~~~~ 247 (375)
T 3op7_A 214 GIAVNSLSKTYSLPGIRIGWVAANH------QVTDILRDY 247 (375)
T ss_dssp EEEEEESSSSSSCGGGCCEEEECCH------HHHHHHTTT
T ss_pred EEEEeEChhhcCCcccceEEEEeCH------HHHHHHHHH
Confidence 68899999998 466779999855 677777653
No 154
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.63 E-value=2.1e-15 Score=160.24 Aligned_cols=162 Identities=14% Similarity=0.082 Sum_probs=116.3
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
.++.+++++|.+. .+++++|+ .||.+++.++++|||+|+++.+.|.+... .+...|..+ +.++.
T Consensus 210 ~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~--------~~~~~G~~~--v~v~~ 274 (755)
T 2vyc_A 210 SEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLMLTGAKP--VYMVP 274 (755)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHHCCEE--EEECC
T ss_pred HHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCCEE--EEEeC
Confidence 5677899999975 25567775 68999999999999999999876544321 234556644 33333
Q ss_pred cCCC----CCC-----CHHHHHHHhhhc-CC--------eEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEEeccccccc
Q 018300 232 DEST----GLV-----DYDMLEKTAILF-RP--------KLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGL 292 (358)
Q Consensus 232 ~~~~----~~i-----D~d~le~~i~~~-~~--------klIi~~~s~-~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl 292 (358)
+.++ +.+ |+++|++.+++. ++ +++++..++ +|...|+++|+++|+++|++|++|+||+.++
T Consensus 275 ~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhc
Confidence 3221 235 999999988652 23 366665455 5778999999999999999999999998654
Q ss_pred cccCCc--cCCCCC--CcE------EEEcCcCcCccCc-EEEEEEeCC
Q 018300 293 VAASVV--ADPFKY--CDV------VTTTTHKSLRGPR-GGMIFFKKD 329 (358)
Q Consensus 293 ~~~g~~--~~pl~g--aDi------v~~S~hK~L~Gp~-GG~I~~~~~ 329 (358)
...+.. ..++.+ +|+ +++|+||+|+||+ ||+|+.+++
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECC
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCc
Confidence 433221 123335 676 9999999999997 688888765
No 155
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.62 E-value=1.2e-14 Score=141.59 Aligned_cols=188 Identities=21% Similarity=0.189 Sum_probs=126.2
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCc-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r-~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
.+|.|++++...+.+... +..+.+ .|+..+...+ .++++++++|.+. .|.+++|+.++..++..+ ++
T Consensus 61 ~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~----l~~~la~~~~~~~-----~i~~~sG~~a~~~~~~~l~~~~ 130 (401)
T 2bwn_A 61 QHPVVLAAMHEALEAVGA-GSGGTRNISGTTAYHRR----LEAEIAGLHQKEA-----ALVFSSAYNANDATLSTLRVLF 130 (401)
T ss_dssp GCHHHHHHHHHHHHHHCS-CCCSBTTTBCCBHHHHH----HHHHHHHHTTCSE-----EEEESCHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHcCC-CCCCcCcccCChHHHHH----HHHHHHHHhCCCc-----EEEECCcHHHHHHHHHHHhcCC
Confidence 467899999887754221 111111 2233333333 4566889999743 477799999888887765 36
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh---cCCeEEEEcCCCC--CCC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAY--PRD 265 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~---~~~klIi~~~s~~--~~~ 265 (358)
|||+|++.++.|.++.. .+...|..+ +.++.+ |++++++.++. .++++|++..+++ |..
T Consensus 131 ~gd~Vl~~~~~~~~~~~--------~~~~~g~~~--~~v~~~------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~ 194 (401)
T 2bwn_A 131 PGLIIYSDSLNHASMIE--------GIKRNAGPK--RIFRHN------DVAHLRELIAADDPAAPKLIAFESVYSMDGDF 194 (401)
T ss_dssp TTCEEEEETTCCHHHHH--------HHHHSCCCE--EEECTT------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCB
T ss_pred CCCEEEECchhhHHHHH--------HHHHcCCeE--EEEcCC------CHHHHHHHHHhhccCCceEEEEecCcCCCCCc
Confidence 99999999876655421 223456543 343332 78899888763 3678888866554 668
Q ss_pred CCHHHHHHHHHHcCCEEEEecccccccccc-CC-cc--CCC-CCCcEEEEcCcCcCccCcEEEEEEeC
Q 018300 266 FDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VA--DPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 266 ~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~-g~-~~--~pl-~gaDiv~~S~hK~L~Gp~GG~I~~~~ 328 (358)
.|+++|.++|+++|+++++|++|+.|.... +. .. ..+ +..|+++.|++|+|++ .||++++++
T Consensus 195 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~~ 261 (401)
T 2bwn_A 195 GPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAASA 261 (401)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEECH
T ss_pred CCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecCH
Confidence 899999999999999999999999775421 11 00 011 1458999999999865 468888875
No 156
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.62 E-value=8.4e-15 Score=140.68 Aligned_cols=203 Identities=14% Similarity=0.104 Sum_probs=132.6
Q ss_pred cccccccCC--CCcHHHHHHHhhhhhccc--CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHH
Q 018300 104 SLELIASEN--FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (358)
Q Consensus 104 ~i~lias~n--~~s~~V~~al~~~l~~~~--~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~ 179 (358)
-++|-..++ .+++.|++++...+.+.. ..+|+.. +. .+ .++++++++|++.+ ..+++++|++
T Consensus 28 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~----~~---~~----lr~~la~~~g~~~~---~i~~t~g~~~ 93 (360)
T 3hdo_A 28 WIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA----SS---QK----LREVAGELYGFDPS---WIIMANGSDE 93 (360)
T ss_dssp SEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS----SC---HH----HHHHHHHHHTCCGG---GEEEESSHHH
T ss_pred eeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC----ch---HH----HHHHHHHHhCcCcc---eEEEcCCHHH
Confidence 345544444 458999999988776530 1234431 11 23 35567888998764 2345566778
Q ss_pred HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
|+..++.++++|||+|++.++.|.++.. .+...|. +++.+++++ ++.+ ++++ +..++|+|++..
T Consensus 94 al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~--~~l~---~~~~~~~v~i~~ 157 (360)
T 3hdo_A 94 VLNNLIRAFAAEGEEIGYVHPSYSYYGT--------LAEVQGA--RVRTFGLTG-DFRI--AGFP---ERYEGKVFFLTT 157 (360)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHHTC--EEEEECBCT-TSSB--TTCC---SSBCSSEEEEES
T ss_pred HHHHHHHHHhCCCCEEEEcCCChHHHHH--------HHHHCCC--EEEEeeCCC-CCCH--HHHH---hhcCCCEEEEeC
Confidence 9999999999999999999886665421 2334465 445555553 2333 3333 223578887765
Q ss_pred CCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcC--ccCcEEEEEEeCCCCch
Q 018300 260 SAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (358)
Q Consensus 260 s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~ 333 (358)
+++ |...|.++|.++|+++|+++++|++|+. +...+.. ...+ +.+++++|+||++ +|.+.|++++++
T Consensus 158 p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~-~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~----- 230 (360)
T 3hdo_A 158 PNAPLGPSFPLEYIDELARRCAGMLVLDETYAE-FAESNAL-ELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP----- 230 (360)
T ss_dssp SCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGG-GSSCCCT-HHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH-----
T ss_pred CCCCCCCCcCHHHHHHHHHHCCCEEEEECChHh-hCCcchh-HHhccCCCEEEEecchHhhcCCccceeeEeeCH-----
Confidence 554 6789999999999999999999999873 2211111 0011 4458899999996 567789999865
Q ss_pred hHHHHHHhhcc
Q 018300 334 VELESAINNAV 344 (358)
Q Consensus 334 ~~~~~~i~~~~ 344 (358)
++.+++....
T Consensus 231 -~~~~~~~~~~ 240 (360)
T 3hdo_A 231 -EVIAALDKIR 240 (360)
T ss_dssp -HHHHHHHHHS
T ss_pred -HHHHHHHHhC
Confidence 6777766543
No 157
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.61 E-value=7e-15 Score=145.20 Aligned_cols=174 Identities=12% Similarity=-0.003 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHcCC--CCCCCcceEEeCCCHHHHHHHHHHhccCCC--------------EEEec-CCCCCccccccc
Q 018300 148 ELETLCQKRALAAFNL--DENKWGVNVQPLSGSPANFEVYTAILKPHD--------------RIMGL-DLPHGGHLSHGF 210 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~--~~~~~~v~V~~~SGt~A~~~a~~all~pGD--------------~Vl~~-~~~~ggh~s~~~ 210 (358)
++++.+.+++.+.+|. +++ -.+++++|++|+..++.+++++|| +|+++ ++.|.++.....
T Consensus 87 ~lr~~ia~~l~~~~g~~~~~~---~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~ 163 (444)
T 3if2_A 87 AFIDALVGFFNRHYDWNLTSE---NIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHV 163 (444)
T ss_dssp HHHHHHHHHHHHHHCCCCCGG---GEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCS
T ss_pred HHHHHHHHHHHhhcCCCCCHH---HEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccc
Confidence 5666666666666664 443 234455666799999999999998 78775 676666543110
Q ss_pred ccchhccccCCceEEEEeceecCCC----CCCCHHHHHHHhh--hcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcC
Q 018300 211 MTPKRRVSGTSIYFESMPYRLDEST----GLVDYDMLEKTAI--LFRPKLIIAGASAY--PRDFD---YPRMRQIADAVG 279 (358)
Q Consensus 211 ~~~~~~~~~~g~~~~~~~~~~~~~~----~~iD~d~le~~i~--~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g 279 (358)
........+ ..+.++++++++ ..+|+++|++.+. ..++++|++..+++ |...+ +++|.++|+++|
T Consensus 164 --~~~~~~~~~--~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~ 239 (444)
T 3if2_A 164 --EGQHFAAVL--PHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYD 239 (444)
T ss_dssp --SSCCEEECC--CEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred --ccchhhccC--ceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCC
Confidence 000112223 345555565422 2689999998732 23678887755554 55677 888999999999
Q ss_pred CEEEEeccccccccccCCcc-CC-CCCCcEEEEcCcCcC-ccCcEEEEEEeC
Q 018300 280 ALLMMDMAHISGLVAASVVA-DP-FKYCDVVTTTTHKSL-RGPRGGMIFFKK 328 (358)
Q Consensus 280 ~~livD~Ah~~Gl~~~g~~~-~p-l~gaDiv~~S~hK~L-~Gp~GG~I~~~~ 328 (358)
++|++|++|+..+....... .+ ..+.+++++|+||++ +|.+.|+++.++
T Consensus 240 ~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 291 (444)
T 3if2_A 240 IPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADA 291 (444)
T ss_dssp CCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCH
T ss_pred CEEEEECCCCCcccccccccccccCCCCEEEEechhhccCCCCceEEEEECH
Confidence 99999999874321110001 11 125679999999974 456779998876
No 158
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.61 E-value=6e-15 Score=145.10 Aligned_cols=230 Identities=17% Similarity=0.158 Sum_probs=140.2
Q ss_pred hcccccccChHH-HHHHHHHHHHh-hhccccccc---C----CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHH
Q 018300 79 VDYSLGEADPEV-CEIITKEKERQ-FKSLELIAS---E----NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDEL 149 (358)
Q Consensus 79 ~~~~l~~~d~~~-~~~i~~e~~~~-~~~i~lias---~----n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~l 149 (358)
+..++...++.. +.+.+...... .+.++|-.+ + .++++.|++++...+......+|+. ..|.. ++
T Consensus 24 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~~---~l 97 (420)
T 4f4e_A 24 LFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLP---IDGIA---AY 97 (420)
T ss_dssp TTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCC---TTCCH---HH
T ss_pred HhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCC---CCCcH---HH
Confidence 346677777764 44444433322 245666544 1 2234899999988776533334443 12332 44
Q ss_pred HHHHHHHHHHHcCC--CCCCCcceEEeCCCHHHHHHH--HHHhccCCCEEEecCCCCCcccccccccchhccccCCceEE
Q 018300 150 ETLCQKRALAAFNL--DENKWGVNVQPLSGSPANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (358)
Q Consensus 150 E~~~~~~la~lfg~--~~~~~~v~V~~~SGt~A~~~a--~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (358)
++.+.+++....+. +++.+ ..+++++|++|+..+ +.++++|||+|+++++.|.++.. .+...|..+.
T Consensus 98 r~~ia~~l~~~~~~~~~~~~~-~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~~ 168 (420)
T 4f4e_A 98 DASVQKLLLGDDSPLIAAGRV-VTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRA--------LFDMAGFEVV 168 (420)
T ss_dssp HHHHHHHHHCTTCHHHHTTCE-EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHTTCCEE
T ss_pred HHHHHHHhcCCCccccccCce-EEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHH--------HHHHcCCeEE
Confidence 44444433322221 22100 124445667799988 55678999999999886655421 2345565444
Q ss_pred EEecee-cCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCC
Q 018300 226 SMPYRL-DESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV 297 (358)
Q Consensus 226 ~~~~~~-~~~~~~iD~d~le~~i~~~--~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~ 297 (358)
++++ +++++.+|++++++.++.. ++++|++..+++| ...+ +++|+++|+++|+++++|++|. ++..++.
T Consensus 169 --~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~-~~~~~~~ 245 (420)
T 4f4e_A 169 --AYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQ-GFGESIE 245 (420)
T ss_dssp --EEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TSSSCTT
T ss_pred --EeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccc-cccCCcc
Confidence 4444 3346789999999998642 4678887766655 3444 6789999999999999999975 5444321
Q ss_pred --ccC--CC---CCCcEEEEcCcCcCc--cCcEEEEEE
Q 018300 298 --VAD--PF---KYCDVVTTTTHKSLR--GPRGGMIFF 326 (358)
Q Consensus 298 --~~~--pl---~gaDiv~~S~hK~L~--Gp~GG~I~~ 326 (358)
.+. .+ ...++++.|++|+++ |.|.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 246 ADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSI 283 (420)
T ss_dssp GGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEE
T ss_pred hhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEE
Confidence 111 01 144688999999974 778898865
No 159
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.60 E-value=2.3e-14 Score=137.76 Aligned_cols=203 Identities=13% Similarity=0.046 Sum_probs=128.3
Q ss_pred cccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHH
Q 018300 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (358)
Q Consensus 104 ~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~ 181 (358)
-+++...++. .++.|++++...+.. ..+|+. .|. .+ .++.+++++|++.+ ..+++++|++|+
T Consensus 26 ~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~----~~~---~~----l~~~la~~~~~~~~---~v~~~~g~~~al 89 (364)
T 1lc5_A 26 LLDFSANINPLGMPVSVKRALIDNLDC--IERYPD----ADY---FH----LHQALARHHQVPAS---WILAGNGETESI 89 (364)
T ss_dssp SEECSSCCCTTCCCHHHHHHHHHTGGG--GGSCCC----TTC---HH----HHHHHHHHHTSCGG---GEEEESSHHHHH
T ss_pred eEEeccccCCCCCCHHHHHHHHHHHHH--hhcCCC----CCH---HH----HHHHHHHHHCcCHH---HEEECCCHHHHH
Confidence 4556544443 689999999877643 123432 111 23 34557888898754 124444556799
Q ss_pred HHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCC-HHHHHHHhhhcCCeEEEEcCC
Q 018300 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD-YDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD-~d~le~~i~~~~~klIi~~~s 260 (358)
..++.++ +||+|++.++.|.++.. .+...|.. ++.++.+++++ ++ ++++.+.+. .++++|++..+
T Consensus 90 ~~~~~~~--~gd~vl~~~p~y~~~~~--------~~~~~g~~--~~~v~~~~~~~-~~~l~~~~~~~~-~~~~~v~i~~p 155 (364)
T 1lc5_A 90 FTVASGL--KPRRAMIVTPGFAEYGR--------ALAQSGCE--IRRWSLREADG-WQLTDAILEALT-PDLDCLFLCTP 155 (364)
T ss_dssp HHHHHHH--CCSEEEEEESCCTHHHH--------HHHHTTCE--EEEEECCGGGT-TCCCTTHHHHCC-TTCCEEEEESS
T ss_pred HHHHHHc--CCCeEEEeCCCcHHHHH--------HHHHcCCe--EEEEeCCcccc-cchhHHHHHhcc-CCCCEEEEeCC
Confidence 9998888 78999998876655321 23345654 44444543222 33 455555443 36788776555
Q ss_pred CC--CCCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCC-CC--CCcEEEEcCcCcC--ccCcEEEEE-EeCC
Q 018300 261 AY--PRDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK--YCDVVTTTTHKSL--RGPRGGMIF-FKKD 329 (358)
Q Consensus 261 ~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p-l~--gaDiv~~S~hK~L--~Gp~GG~I~-~~~~ 329 (358)
++ |...+ +++|.++|+++|+++++|++|+.+. ..+..... ++ +.++++.|+||++ +|.+.|+++ .++
T Consensus 156 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~- 233 (364)
T 1lc5_A 156 NNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI-PHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD- 233 (364)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGS-TTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH-
T ss_pred CCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhc-cCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCH-
Confidence 54 45677 8999999999999999999987432 21211111 12 5689999999998 456779998 665
Q ss_pred CCchhHHHHHHhhc
Q 018300 330 PVLGVELESAINNA 343 (358)
Q Consensus 330 ~~~~~~~~~~i~~~ 343 (358)
++.+++...
T Consensus 234 -----~~~~~l~~~ 242 (364)
T 1lc5_A 234 -----AAMARMRRQ 242 (364)
T ss_dssp -----HHHHHHHHH
T ss_pred -----HHHHHHHHh
Confidence 566666554
No 160
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.60 E-value=2.9e-14 Score=144.25 Aligned_cols=194 Identities=12% Similarity=0.055 Sum_probs=127.1
Q ss_pred CcHHHHHHHhhhhhcc---cCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCCCHHHHHHHHHHh
Q 018300 114 TSRAVMEAVGSCLTNK---YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAI 188 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~---~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~--~~~~~v~V~~~SGt~A~~~a~~al 188 (358)
.|+.++++....+... ...+|+. ..|.. ++++.+.+++.+.+|.. ++ ..+++++|+.|+..++.++
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~g~~~~~~---~i~~t~G~~~al~~~~~~l 177 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSH---SQGIH---GLRDAIASGIASRDGFPANAD---DIFLTDGASPGVHLMMQLL 177 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCC---TTCCH---HHHHHHHHHHHHHHSSCCCGG---GEEEESSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCC---CcChH---HHHHHHHHHHHhhcCCCCCcc---cEEEcCCHHHHHHHHHHHH
Confidence 5666766665555442 1223332 22333 56666777777777743 33 2345556678999999999
Q ss_pred c-cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhc-----CCeEEEEcCCC
Q 018300 189 L-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASA 261 (358)
Q Consensus 189 l-~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~-----~~klIi~~~s~ 261 (358)
+ ++||+|+++++.|.++.. .+...|. ++++|+++++ ++.+|+++|++.++.. ++|+|++..++
T Consensus 178 ~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~ 247 (500)
T 3tcm_A 178 IRNEKDGILVPIPQYPLYSA--------SIALHGG--ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPG 247 (500)
T ss_dssp CCSTTEEEEEEESCCTHHHH--------HHHHTTC--EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHhHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCC
Confidence 7 899999999987765432 2345565 4556666654 3489999999988753 57887775556
Q ss_pred CC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCC-------C---C-CCc-EEEEcCcCcC---ccCcE
Q 018300 262 YP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP-------F---K-YCD-VVTTTTHKSL---RGPRG 321 (358)
Q Consensus 262 ~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~p-------l---~-gaD-iv~~S~hK~L---~Gp~G 321 (358)
+| ...+ +++|+++|+++|+++++|++|.......+....+ + . ..+ +++.|++|+| +|.|+
T Consensus 248 NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~ 327 (500)
T 3tcm_A 248 NPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRG 327 (500)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCC
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccce
Confidence 54 3444 6777788999999999999987543322211111 1 1 122 6678999998 47888
Q ss_pred EEEEE
Q 018300 322 GMIFF 326 (358)
Q Consensus 322 G~I~~ 326 (358)
|++++
T Consensus 328 G~~~~ 332 (500)
T 3tcm_A 328 GYFEI 332 (500)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99988
No 161
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.60 E-value=8.1e-16 Score=153.64 Aligned_cols=159 Identities=14% Similarity=0.134 Sum_probs=108.9
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~ 231 (358)
+++++++ +|++. .+++++| |+|+.+++.++++|||+|+++++.|.++.. .+...|..+ ++++.
T Consensus 62 ~~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~--~~v~~ 125 (446)
T 2x3l_A 62 SMKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLH--------ALDISQQEG--HFIET 125 (446)
T ss_dssp HHHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHH--------HHHHHTCCE--EECEE
T ss_pred HHHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHH--------HHHHcCCeE--EEEeC
Confidence 5667888 99873 3455555 579999999999999999999876554321 233456543 44444
Q ss_pred --cCCC---CCCCHHHHHHHhhhcCCeEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-C
Q 018300 232 --DEST---GLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y 304 (358)
Q Consensus 232 --~~~~---~~iD~d~le~~i~~~~~klIi~~~s~-~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-g 304 (358)
+++. +.+|++++ +. .++++|++..++ +|...|+++|.++|+++|+++++|++|+..+.+.+....... +
T Consensus 126 ~~~~~~~~~~~~d~~~l---~~-~~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g 201 (446)
T 2x3l_A 126 HQSPLTNHYNKVNLSRL---NN-DGHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQ 201 (446)
T ss_dssp EECTTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGT
T ss_pred eeccccCcCCCCCHHHH---cC-CCceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcC
Confidence 4322 35788877 23 367887775554 577899999999999999999999999863333332112223 7
Q ss_pred CcEEEEcCcCcCccCc-EEEEEEeCCCC
Q 018300 305 CDVVTTTTHKSLRGPR-GGMIFFKKDPV 331 (358)
Q Consensus 305 aDiv~~S~hK~L~Gp~-GG~I~~~~~~~ 331 (358)
+|++++|+||++.|+. +|+++++++.+
T Consensus 202 ~Di~~~S~~K~l~~~~g~g~l~~~~~~i 229 (446)
T 2x3l_A 202 ADYVVQSFHKTLPALTMGSVLYIHKNAP 229 (446)
T ss_dssp CSEEEECHHHHSSSCTTCEEEEEETTCT
T ss_pred CCEEEECCccccccccccEEEEEcCCcC
Confidence 8999999999988774 59999988743
No 162
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.58 E-value=5.4e-14 Score=138.62 Aligned_cols=175 Identities=15% Similarity=0.113 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHcCCCCCC------CcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccC
Q 018300 148 ELETLCQKRALAAFNLDENK------WGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~------~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (358)
++++.+.+++++.+|.+... . -+|.+++| ++|+..++.++++|||+|++.++.|.++.. .+...
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~ 152 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQ-MDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQ--------SLHPL 152 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTC-EEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHGGG
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCc-CcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHc
Confidence 46666777788888986411 0 14555555 569999999999999999999886655421 23445
Q ss_pred CceEEEEeceecCCCCCCCHHHHHHHhhh-----------cCCeEEEE-cCCCC--CCCCCH---HHHHHHHHHcCCEEE
Q 018300 221 SIYFESMPYRLDESTGLVDYDMLEKTAIL-----------FRPKLIIA-GASAY--PRDFDY---PRMRQIADAVGALLM 283 (358)
Q Consensus 221 g~~~~~~~~~~~~~~~~iD~d~le~~i~~-----------~~~klIi~-~~s~~--~~~~dl---~~I~~ia~e~g~~li 283 (358)
|. +++++++++ + .+|+++|++.++. .++|+|++ ..+++ |...+. ++|.++|+++|++|+
T Consensus 153 g~--~~~~v~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li 228 (425)
T 2r2n_A 153 GC--NIINVASDE-S-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228 (425)
T ss_dssp TC--EEEEECEET-T-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CC--EEEEeCcCC-C-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 65 445555653 2 4899999998862 35788876 34444 456664 489999999999999
Q ss_pred EeccccccccccCCccCC---CC--CCcEEEEcCcCcCc-cCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 284 MDMAHISGLVAASVVADP---FK--YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 284 vD~Ah~~Gl~~~g~~~~p---l~--gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+|++|+ ++.+.+..+.+ ++ +.++++.|++|++. |.|.|++++++ ++.+++..
T Consensus 229 ~De~~~-~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~------~l~~~l~~ 286 (425)
T 2r2n_A 229 EDDPYY-FLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPK------PLIERVIL 286 (425)
T ss_dssp EECTTG-GGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEH------HHHHHHHH
T ss_pred EECCcc-cccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCH------HHHHHHHH
Confidence 999987 34433321112 22 34588999999984 55679999987 45555543
No 163
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.58 E-value=6.7e-14 Score=138.46 Aligned_cols=204 Identities=12% Similarity=0.050 Sum_probs=122.4
Q ss_pred cccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHc--CCCCCCCcceEEeCCCH-
Q 018300 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQPLSGS- 178 (358)
Q Consensus 104 ~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lf--g~~~~~~~v~V~~~SGt- 178 (358)
-|+|...++ .+++.|++++...+...... .+...|+......++++.+.+++. + +++++ +|++++|+
T Consensus 71 ~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~----~i~~t~G~~ 142 (449)
T 3qgu_A 71 IISLGIGDTTEPLPKYIADAMAKAAAGLATR--EGYSGYGAEQGQGALREAVASTFY--GHAGRAAD----EIFISDGSK 142 (449)
T ss_dssp CEECSSCCCCCCCCHHHHHHHHHHHHGGGGS--CCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGG----GEEEESCHH
T ss_pred EEEeeCCCCCCCCCHHHHHHHHHHHHhhccc--cCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHH----HEEEccCHH
Confidence 455554443 46899999998877642210 010112111112345554333332 2 44443 35555555
Q ss_pred HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCce--------EEEEeceecCC-CCCCCHHHHHHHhhh
Q 018300 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY--------FESMPYRLDES-TGLVDYDMLEKTAIL 249 (358)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~--------~~~~~~~~~~~-~~~iD~d~le~~i~~ 249 (358)
+++..+ .++++|||+|++.++.|.++.. .+...|.. ++++.++++++ ....|++++
T Consensus 143 ~al~~~-~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 207 (449)
T 3qgu_A 143 CDIARI-QMMFGSKPTVAVQDPSYPVYVD--------TSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------ 207 (449)
T ss_dssp HHHHHH-HHHHCSSSCEEEEESCCTHHHH--------HHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC------
T ss_pred HHHHHH-HHHhCCCCEEEEcCCCChhHHH--------HHHHcCCcccccccccceeEEEecccccCCcCChhHc------
Confidence 577776 8889999999999887766532 12233432 11344445533 234554321
Q ss_pred cCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C---CCcEEEEcCcCcC--
Q 018300 250 FRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVVTTTTHKSL-- 316 (358)
Q Consensus 250 ~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~---gaDiv~~S~hK~L-- 316 (358)
.++++|++..+++| ...+ +++|+++|+++|+++++|++|.. +...+..+.++ + +.++++.|++|++
T Consensus 208 ~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 286 (449)
T 3qgu_A 208 KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYAL-YISNPDCPKTIYEIPGADEVAIETCSFSKYAGF 286 (449)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG-GCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTC
T ss_pred CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHh-hhcCCCCCCCHhhccCCCCcEEEEecchhhcCC
Confidence 46888887666655 3444 78888999999999999999884 34333222122 1 4568999999997
Q ss_pred ccCcEEEEEEeCCCC
Q 018300 317 RGPRGGMIFFKKDPV 331 (358)
Q Consensus 317 ~Gp~GG~I~~~~~~~ 331 (358)
+|.|.|+++++++.+
T Consensus 287 ~G~r~G~~~~~~~~~ 301 (449)
T 3qgu_A 287 TGVRLGWTVVPKALK 301 (449)
T ss_dssp TTCCCEEEECCTTCB
T ss_pred ccceeEEEecCHHHH
Confidence 477889999988644
No 164
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.57 E-value=1.1e-14 Score=143.21 Aligned_cols=217 Identities=13% Similarity=0.082 Sum_probs=134.0
Q ss_pred hcccccccCC-C--CcHHH--HHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHc-CCCCCCCcceEEeCC
Q 018300 103 KSLELIASEN-F--TSRAV--MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLS 176 (358)
Q Consensus 103 ~~i~lias~n-~--~s~~V--~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lf-g~~~~~~~v~V~~~S 176 (358)
.-+++-.+++ . .++.+ ++++...+......+|+. ..|. .++++.+.+++.+.+ +++++++...+++++
T Consensus 48 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g 121 (430)
T 2x5f_A 48 TTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAP---PQGI---EELRDLWQQKMLRDNPELSIDNMSRPIVTNA 121 (430)
T ss_dssp CSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCC---TTCC---HHHHHHHHHHHHHHCTTCCGGGBCCCEEESH
T ss_pred CcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCC---CCCC---HHHHHHHHHHHhccCcccCCCccceEEEcCC
Confidence 4456654444 1 34555 777665543211223433 1122 245554444443332 665532000244555
Q ss_pred CHHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhcccc-CCceEEEEeceecCCCCCCCHHHHHHHhhhc--CCe
Q 018300 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG-TSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPK 253 (358)
Q Consensus 177 Gt~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~k 253 (358)
|++|+..++.++++|||+|++.++.|.++.. .+.. .|. +++.++++++++.+|++++++.++.. +++
T Consensus 122 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 191 (430)
T 2x5f_A 122 LTHGLSLVGDLFVNQDDTILLPEHNWGNYKL--------VFNTRNGA--NLQTYPIFDKDGHYTTDSLVEALQSYNKDKV 191 (430)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHTTTTCC--EEEEECCBCTTSCBCSHHHHHHHHHCCSSEE
T ss_pred chHHHHHHHHHHhCCCCEEEEcCCcCccHHH--------HHHHhcCC--eEEEEeccCccCCcCHHHHHHHHHhcCCCCE
Confidence 6789999999999999999999887766421 2334 555 44555565433579999999988652 578
Q ss_pred EEEEcCCCCC--CCCC---HHHHHHHHHH-----cCCEEEEeccccccccccCC-ccC---CC---CCC---cEEEEcCc
Q 018300 254 LIIAGASAYP--RDFD---YPRMRQIADA-----VGALLMMDMAHISGLVAASV-VAD---PF---KYC---DVVTTTTH 313 (358)
Q Consensus 254 lIi~~~s~~~--~~~d---l~~I~~ia~e-----~g~~livD~Ah~~Gl~~~g~-~~~---pl---~ga---Div~~S~h 313 (358)
+|++..+++| ...+ +++|.++|++ +|+++++|++|... ...+. .+. .+ .+. ++++.|+|
T Consensus 192 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 270 (430)
T 2x5f_A 192 IMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGL-FYEDVYTQSLFTALTNLHSNAILPIRLDGAT 270 (430)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTC-BCSSSCCSCHHHHHHTTCCTTEEEEEEEEHH
T ss_pred EEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccc-cCCcccchHHHHHHhhccCCcceEEEEEecc
Confidence 8777655654 5666 8899999999 99999999998743 33322 111 12 134 67799999
Q ss_pred CcC--ccCcEEEEEE---eCCCCchhHHHHHHhh
Q 018300 314 KSL--RGPRGGMIFF---KKDPVLGVELESAINN 342 (358)
Q Consensus 314 K~L--~Gp~GG~I~~---~~~~~~~~~~~~~i~~ 342 (358)
|++ +|.|.|++++ ++ ++.+++..
T Consensus 271 K~~~~~G~riG~~~~~~~~~------~~~~~l~~ 298 (430)
T 2x5f_A 271 KEFFAWGFRVGFMTFGTSDQ------TTKEVLEA 298 (430)
T ss_dssp HHTTCGGGCCEEEEEBCCCH------HHHHHHHH
T ss_pred cCCCCCCCCeEEEEEecCCH------HHHHHHHH
Confidence 998 4556799998 55 55555543
No 165
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.57 E-value=1.4e-14 Score=142.66 Aligned_cols=228 Identities=12% Similarity=0.103 Sum_probs=132.7
Q ss_pred cccccccCh-HHHHHHHHHHHHh---h---hcccccccCC--CCcHHHHHHHhhhhhcccC-CCCCCCcCCCCcHHHHHH
Q 018300 80 DYSLGEADP-EVCEIITKEKERQ---F---KSLELIASEN--FTSRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDEL 149 (358)
Q Consensus 80 ~~~l~~~d~-~~~~~i~~e~~~~---~---~~i~lias~n--~~s~~V~~al~~~l~~~~~-~G~pg~r~~~G~~~~~~l 149 (358)
+.+++.+.+ +.|+.+.+..... . +-|+|...+. ..++.|++++...+..... .++. .| +......++
T Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~y-~~~~g~~~l 103 (432)
T 3ei9_A 27 NSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYS--GY-GAEQGAKPL 103 (432)
T ss_dssp CHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCC--CC-CCTTCCHHH
T ss_pred ChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCcc--CC-CCCCCCHHH
Confidence 455666666 3665553332221 1 2355543333 4789999999887653211 1111 12 111112356
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEeCCCHH-HHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCce-----
Q 018300 150 ETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----- 223 (358)
Q Consensus 150 E~~~~~~la~lfg~~~~~~~v~V~~~SGt~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~----- 223 (358)
++.+.+++.+.++++++ .|++++|+. ++. ++.++++|||+|++.++.|.++... +...+..
T Consensus 104 ~~~ia~~~~~~~~~~~~----~i~~t~G~~~al~-~l~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~~ 170 (432)
T 3ei9_A 104 RAAIAKTFYGGLGIGDD----DVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDS--------SVIMGQTGQFNT 170 (432)
T ss_dssp HHHHHHHHHTTTTCCGG----GEEEESCHHHHHH-HHHHHHCTTCCEEEEESCCTHHHHH--------HHHHTCSCCEET
T ss_pred HHHHHHHHHccCCCCcc----eEEECCChHHHHH-HHHHHcCCCCEEEEeCCCCHHHHHH--------HHHcCCcccccc
Confidence 66555555444566653 355666665 555 4678899999999999877665321 1111210
Q ss_pred -----EEEEeceecCCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccc
Q 018300 224 -----FESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGL 292 (358)
Q Consensus 224 -----~~~~~~~~~~~~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl 292 (358)
.++.++++++++ ...|+++ ..++++|++..+++| ..++ +++|+++|+++|++|++|++|+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~- 243 (432)
T 3ei9_A 171 DVQKYGNIEYMRCTPENGFFPDLST------VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMY- 243 (432)
T ss_dssp TTTEETTCEEEECCGGGTTSCCGGG------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG-
T ss_pred cccccCceEEeccCcccCCcCChhh------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhh-
Confidence 123334444322 2445432 236888877666655 4554 677788899999999999999843
Q ss_pred cccCCccCC--CC---CCcEEEEcCcCcC--ccCcEEEEEEeCCC
Q 018300 293 VAASVVADP--FK---YCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (358)
Q Consensus 293 ~~~g~~~~p--l~---gaDiv~~S~hK~L--~Gp~GG~I~~~~~~ 330 (358)
..++..... +. +.++++.|++|+| +|.|.|+++++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~ 288 (432)
T 3ei9_A 244 MSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKL 288 (432)
T ss_dssp CCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTC
T ss_pred ccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHH
Confidence 333221111 11 3468999999997 67778999998864
No 166
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.57 E-value=5.1e-14 Score=134.54 Aligned_cols=202 Identities=14% Similarity=0.113 Sum_probs=132.1
Q ss_pred hcccccccCCC--CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 103 ~~i~lias~n~--~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
.-+++-..+++ +++.|++++...+... .+||.. +. .+ .++++++++|++++ ..+++++|++|
T Consensus 27 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~----~~---~~----l~~~la~~~~~~~~---~i~~~~g~t~a 90 (361)
T 3ftb_A 27 ELLDYSSNINPLGIPKSFLNNIDEGIKNL--GVYPDV----NY---RR----LNKSIENYLKLKDI---GIVLGNGASEI 90 (361)
T ss_dssp -CEETTCCCCTTCSCHHHHTTHHHHHHGG--GSCCCT----TC---HH----HHHHHHHHHTCCSC---EEEEESSHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHHh--cCCCCc----cH---HH----HHHHHHHHhCCCcc---eEEEcCCHHHH
Confidence 44566555453 5899999998776542 234331 11 23 45568888998764 12444566779
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
+..++.++ |+|++.++.|.++.. .+...|. +++.+++++ ++.+|++++++.+++ +++|++..+
T Consensus 91 l~~~~~~~----d~vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~-~~~~~~~~l~~~l~~--~~~v~i~~p 153 (361)
T 3ftb_A 91 IELSISLF----EKILIIVPSYAEYEI--------NAKKHGV--SVVFSYLDE-NMCIDYEDIISKIDD--VDSVIIGNP 153 (361)
T ss_dssp HHHHHTTC----SEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCT-TSCCCHHHHHHHTTT--CSEEEEETT
T ss_pred HHHHHHHc----CcEEEecCChHHHHH--------HHHHcCC--eEEEeecCc-ccCCCHHHHHHhccC--CCEEEEeCC
Confidence 99998887 999998876655321 2334565 445555653 357888999998875 888887666
Q ss_pred CCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C--CCcEEEEcCcCcC--ccCcEEEEEEeC
Q 018300 261 AYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (358)
Q Consensus 261 ~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~--gaDiv~~S~hK~L--~Gp~GG~I~~~~ 328 (358)
+++ ...+ +++|+++|+++|+++++|++|+.. ... .....+ + ...+++.|+||++ +|.+.|++++.+
T Consensus 154 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~ 231 (361)
T 3ftb_A 154 NNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEF-TGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231 (361)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGG-TCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC
T ss_pred CCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhh-cCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC
Confidence 654 4554 677888888999999999998743 322 111111 1 3347789999997 456779988444
Q ss_pred CCCchhHHHHHHhhcc
Q 018300 329 DPVLGVELESAINNAV 344 (358)
Q Consensus 329 ~~~~~~~~~~~i~~~~ 344 (358)
+ ++.+++....
T Consensus 232 ~-----~~~~~~~~~~ 242 (361)
T 3ftb_A 232 K-----EIAAKIKAKQ 242 (361)
T ss_dssp H-----HHHHHHHTTS
T ss_pred H-----HHHHHHHhhC
Confidence 4 6777776543
No 167
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.57 E-value=4.7e-15 Score=148.13 Aligned_cols=190 Identities=8% Similarity=0.021 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccC----CCEEEecCCCCCcccccccccchhcccc
Q 018300 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP----HDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (358)
Q Consensus 144 ~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~p----GD~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (358)
+..-.+|+....++.+++|.+... ..++++++|.+++++..+..++ ||.|+++.. .|.|. .+++.+
T Consensus 94 ~~~~~~e~~~~~~~~~~lGlp~~~--~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~---aHkSv-----~kAl~l 163 (450)
T 3bc8_A 94 SLLNKITNSLVLNVIKLAGVHSVA--SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRI---DQKSC-----FKSMVT 163 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCC--EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECC---CCHHH-----HHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCc--eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECC---cHHHH-----HHHHHH
Confidence 335578888888999999998642 2244555554444444444443 899988754 55442 145677
Q ss_pred CCceEEEEeceecCCCCCCCHHHHHHHhhhcC---CeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEeccccccccc
Q 018300 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFR---PKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (358)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~---~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~ 294 (358)
.|.....++...+++.+.+|+++|++.+++++ +-+|++.+++++ ...|+++|+++|++||+++++|+||...+..
T Consensus 164 ~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~ 243 (450)
T 3bc8_A 164 AGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSK 243 (450)
T ss_dssp TTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHH
T ss_pred cCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhh
Confidence 88765555433333466899999999997643 234555666676 5789999999999999999999999854332
Q ss_pred cCCcc-CCC--CCCcEEEEcCcCcCccCcE-EEEEEeCCCCchhHHHHHHhhccCCccc
Q 018300 295 ASVVA-DPF--KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQ 349 (358)
Q Consensus 295 ~g~~~-~pl--~gaDiv~~S~hK~L~Gp~G-G~I~~~~~~~~~~~~~~~i~~~~f~g~q 349 (358)
...++ ..+ +++|+++.|+|||+..|-+ ++++.+++ ++.+++.. .+++.|
T Consensus 244 ~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~-----~~~~~~~~-~~~g~~ 296 (450)
T 3bc8_A 244 CMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE-----PFIQDISK-MYPGRA 296 (450)
T ss_dssp HHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH-----HHHHHHHH-HSCSCB
T ss_pred hHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH-----HHHHHHHH-HhhcCC
Confidence 11111 223 4799999999999999965 56666654 55555543 344433
No 168
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.56 E-value=1.3e-14 Score=142.95 Aligned_cols=226 Identities=13% Similarity=0.043 Sum_probs=132.7
Q ss_pred cchhcccccccChHHHHHHHHHHHHhhhcccccccCCC-----CcHHHHHHHhhhhh--cc-cCCCCCCCcCCCCcHHHH
Q 018300 76 SSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVGSCLT--NK-YSEGLPGKRYYGGNEYID 147 (358)
Q Consensus 76 ~~~~~~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~-----~s~~V~~al~~~l~--~~-~~~G~pg~r~~~G~~~~~ 147 (358)
.....+++......++....+.+. +...++|-.+++. +++.+++++...+. .. ...+|+. ..|.+
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~---~~G~~--- 79 (422)
T 3d6k_A 7 KDYDAARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGG---LLGIA--- 79 (422)
T ss_dssp -----------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCC---SSCCH---
T ss_pred cCCCHHHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCC---CCCCH---
Confidence 344566777788888887665444 2345666555552 34467776654321 11 1223433 12222
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHH--HHHHHHhccC------------CCEEEecCCCCCccccccccc
Q 018300 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN--FEVYTAILKP------------HDRIMGLDLPHGGHLSHGFMT 212 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~--~~a~~all~p------------GD~Vl~~~~~~ggh~s~~~~~ 212 (358)
++ ++.++++++++++ +|.+++|+ +++ ..++.++.++ ||+|++.++.|.++..
T Consensus 80 ~l----r~~ia~~~~~~~~----~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~----- 146 (422)
T 3d6k_A 80 DI----RELWAEALGLPAD----LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFT----- 146 (422)
T ss_dssp HH----HHHHHHHHTCCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH-----
T ss_pred HH----HHHHHHHhCCChh----HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHH-----
Confidence 33 4457788898864 35566665 476 5566667666 4579998886655421
Q ss_pred chhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEE-EcCCCC--CCCCCHH---HHHHHHH-HcCCEEEEe
Q 018300 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGASAY--PRDFDYP---RMRQIAD-AVGALLMMD 285 (358)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi-~~~s~~--~~~~dl~---~I~~ia~-e~g~~livD 285 (358)
.+...|. +++++++++ ++ +|++++++.++..++|+|+ +..+++ |...+.+ +|.++|+ ++|+++++|
T Consensus 147 ---~~~~~g~--~~~~v~~~~-~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~D 219 (422)
T 3d6k_A 147 ---ITEHFGF--EMINVPMTD-EG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWD 219 (422)
T ss_dssp ---HHHHHTC--EEEEEEEET-TE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEE
T ss_pred ---HHHHcCC--EEEecCCCC-CC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEE
Confidence 2334465 445555664 33 9999999988654688887 444455 4567765 7777777 899999999
Q ss_pred ccccc-cccccCCccCCC-------C--CCcEEEEcCcCc-CccCcEEEEEEeC
Q 018300 286 MAHIS-GLVAASVVADPF-------K--YCDVVTTTTHKS-LRGPRGGMIFFKK 328 (358)
Q Consensus 286 ~Ah~~-Gl~~~g~~~~pl-------~--gaDiv~~S~hK~-L~Gp~GG~I~~~~ 328 (358)
++|+. ++...+....++ + +.++++.|++|+ ++|.|.|++++++
T Consensus 220 e~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~ 273 (422)
T 3d6k_A 220 NAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK 273 (422)
T ss_dssp CTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH
T ss_pred CCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH
Confidence 99973 443322111122 2 456889999996 4667889999886
No 169
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.56 E-value=6.5e-14 Score=134.81 Aligned_cols=166 Identities=13% Similarity=0.058 Sum_probs=114.2
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHhccCC-CEEEecCCCCCcccccccccchhccccCCceEEEEece
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~ 230 (358)
.++.+++++|++++ +|.+++| ++|+..++.++++|| |+|+++++.|.++.. .+...|. +++.++
T Consensus 63 lr~~la~~~~~~~~----~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~ 128 (356)
T 1fg7_A 63 VIENYAQYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGV--ECRTVP 128 (356)
T ss_dssp HHHHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHH--------HHHHHTC--EEEECC
T ss_pred HHHHHHHHhCCChH----HEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEee
Confidence 45567888898764 3555555 679999999999999 999999887665431 2234455 445555
Q ss_pred ecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCCHHHHH---HHHHHcCCEEEEeccccccccccCCccCCCC--
Q 018300 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMR---QIADAVGALLMMDMAHISGLVAASVVADPFK-- 303 (358)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~dl~~I~---~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-- 303 (358)
++ +++.+|++++++.++ ++|+|++..+++ |...+.+++. ++|+ +|+++++|++|.... ........++
T Consensus 129 ~~-~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~-~~~~~~~~~~~~ 203 (356)
T 1fg7_A 129 TL-DNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFC-PQASLAGWLAEY 203 (356)
T ss_dssp CC-TTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGS-GGGCSGGGTTTC
T ss_pred CC-CCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhc-CCCcHHHHHhhC
Confidence 65 345789999998875 788888876665 4566755554 5555 899999999987432 1111111112
Q ss_pred CCcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhhc
Q 018300 304 YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (358)
Q Consensus 304 gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~~ 343 (358)
+.++++.|+||++ +|.|.|++++++ ++.+++...
T Consensus 204 ~~~i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~l~~~ 239 (356)
T 1fg7_A 204 PHLAILRTLSKAFALAGLRCGFTLANE------EVINLLMKV 239 (356)
T ss_dssp TTEEEEEESSSTTCCGGGCCEEEEECH------HHHHHHHHH
T ss_pred CCEEEEecchHhhcCchhhhEEEEeCH------HHHHHHHHh
Confidence 4578899999997 567779999966 566666553
No 170
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.55 E-value=3.7e-14 Score=138.00 Aligned_cols=225 Identities=15% Similarity=0.174 Sum_probs=133.0
Q ss_pred ccccChH-HHHHHHHHHHHhh-hcccccccC---C----CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHH
Q 018300 83 LGEADPE-VCEIITKEKERQF-KSLELIASE---N----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (358)
Q Consensus 83 l~~~d~~-~~~~i~~e~~~~~-~~i~lias~---n----~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~ 153 (358)
+...++. ++.+.++.+.... .-++|-.+. . .+.+.|.+++.....+....+|+. ..|.+ ++++.+
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~~---~lr~~i 80 (401)
T 7aat_A 7 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLP---IAGLA---DFTRAS 80 (401)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCC---TTCCH---HHHHHH
T ss_pred CCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCC---CCCCH---HHHHHH
Confidence 4444444 4554444333322 335554322 1 234578888876654333334443 12333 455544
Q ss_pred HHHHHHHcCC--CCCCCcce-EEeCCCHHHHHHHHHHh---ccCCCEEEecCCCCCcccccccccchhccccCCceEEEE
Q 018300 154 QKRALAAFNL--DENKWGVN-VQPLSGSPANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 227 (358)
Q Consensus 154 ~~~la~lfg~--~~~~~~v~-V~~~SGt~A~~~a~~al---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~ 227 (358)
.+++.+.+|. ++++ +. +++.+|++|+..++.++ ++|||+|++.++.|.++.. .+...|..+ +
T Consensus 81 a~~~~~~~~~~~~~~~--i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~--~ 148 (401)
T 7aat_A 81 AELALGENSEAFKSGR--YVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP--------IFRDAGLQL--Q 148 (401)
T ss_dssp HHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH--------HHHHTTCEE--E
T ss_pred HHHhcCCCccccccCc--eEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHH--------HHHHcCCee--E
Confidence 4444433342 1332 11 12456778999887665 4999999999887766532 234556644 4
Q ss_pred eceec-CCCCCCCHHHHHHHhhh--cCCeEEEEcCCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCCc-
Q 018300 228 PYRLD-ESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV- 298 (358)
Q Consensus 228 ~~~~~-~~~~~iD~d~le~~i~~--~~~klIi~~~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~- 298 (358)
.++++ ++++.+|++++++.++. .++++|++..++||+ .. ++++|.++|+++|+++++|++|. ++...+..
T Consensus 149 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~ 227 (401)
T 7aat_A 149 AYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQ-GFASGDINR 227 (401)
T ss_dssp EEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTTTSCHHH
T ss_pred eeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccc-cccCCCccc
Confidence 44443 23578999988877654 256788887777654 33 47889999999999999999976 33322210
Q ss_pred -cCCC----C--CCcEEEEcCcCcC--ccCcEEEEEE
Q 018300 299 -ADPF----K--YCDVVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 299 -~~pl----~--gaDiv~~S~hK~L--~Gp~GG~I~~ 326 (358)
..++ + .-.+++.|+||++ +|.|.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 228 DAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp HTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred cHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEE
Confidence 0001 1 3457899999997 5777788886
No 171
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.55 E-value=1.9e-14 Score=140.70 Aligned_cols=193 Identities=15% Similarity=0.136 Sum_probs=117.0
Q ss_pred CCcHHHHHHHhh-hhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEE--eCCCHHHHHHHH--
Q 018300 113 FTSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQ--PLSGSPANFEVY-- 185 (358)
Q Consensus 113 ~~s~~V~~al~~-~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~--~~SGt~A~~~a~-- 185 (358)
++++.|.+++.. .+......+|.. ..|. .++++.+.+++...+| +++++ .++ +.+|+.|+..++
T Consensus 47 ~~~~~v~~a~~~~~~~~~~~~~y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~~---i~~~~t~g~~~a~~~~~~~ 117 (412)
T 1yaa_A 47 WVLPSVKAAEKLIHNDSSYNHEYLG---ITGL---PSLTSNAAKIIFGTQSDALQEDR---VISVQSLSGTGALHISAKF 117 (412)
T ss_dssp CCCHHHHHHHHHHHTCTTCCCCCCC---TTCC---HHHHHHHHHHHHCTTCHHHHTTC---EEEEEEEHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhhhcCcccccCCCC---CCCc---HHHHHHHHHHHhcCCCCCCCcce---EEEEeccchHhHHHHHHHH
Confidence 578999999987 664222223321 1222 2455544444433233 13321 233 556778988873
Q ss_pred HHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee-cCCCCCCCHHHHHHHhhhcC--CeEEEEcCCCC
Q 018300 186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFR--PKLIIAGASAY 262 (358)
Q Consensus 186 ~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~iD~d~le~~i~~~~--~klIi~~~s~~ 262 (358)
..+++|||+|++.++.|.++.. .+...|..+ +.++. +++++.+|++++++.++..+ ..++++..+++
T Consensus 118 ~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~--~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~n 187 (412)
T 1yaa_A 118 FSKFFPDKLVYLSKPTWANHMA--------IFENQGLKT--ATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHN 187 (412)
T ss_dssp HHHHCTTCCEEEEESCCTTHHH--------HHHTTTCCE--EEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCT
T ss_pred HHHhCCCCEEEEeCCCCccHHH--------HHHHcCceE--EEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 4556899999999887665422 233456544 44445 43456799999999887542 33445466665
Q ss_pred C--CCCC---HHHHHHHHHHcCCEEEEeccccccccccC---C-cc-CCCC--C----CcEEEEcCcCcCc--cCcEEEE
Q 018300 263 P--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAAS---V-VA-DPFK--Y----CDVVTTTTHKSLR--GPRGGMI 324 (358)
Q Consensus 263 ~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g---~-~~-~pl~--g----aDiv~~S~hK~L~--Gp~GG~I 324 (358)
| ...+ +++|.++|+++|+++++|++|. ++..++ . .+ ..+. + -++++.|+||+++ |.|.|++
T Consensus 188 PtG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~ 266 (412)
T 1yaa_A 188 PTGLDPTSEQWVQIVDAIASKNHIALFDTAYQ-GFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCF 266 (412)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEecccc-cccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEE
Confidence 4 4544 6788999999999999999985 333222 1 01 0111 3 3577899999874 5566988
Q ss_pred E
Q 018300 325 F 325 (358)
Q Consensus 325 ~ 325 (358)
+
T Consensus 267 ~ 267 (412)
T 1yaa_A 267 H 267 (412)
T ss_dssp E
T ss_pred E
Confidence 8
No 172
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.54 E-value=6.6e-15 Score=146.51 Aligned_cols=186 Identities=13% Similarity=0.067 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccC----CCEEEecCCCCCcccccccccchhccccCCce
Q 018300 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP----HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~p----GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~ 223 (358)
.-|.++-+|++.+ |..... ..+.++.+|.++++++++.+++ ||+|+++. +.|.|. .+.+.+.|..
T Consensus 117 ltn~l~ld~L~~~-G~~~~~--~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpR---n~HKSv-----~kAliL~Gl~ 185 (501)
T 3hl2_A 117 ITNSLVLDIIKLA-GVHTVA--NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPR---IDQKSC-----FKSMITAGFE 185 (501)
T ss_dssp HHHHHHHHHHHHT-TCTTCC--EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEEC---CCCHHH-----HHHHHHTTCE
T ss_pred HHHHHHHHHHHHc-CCCCCC--cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEec---chHHHH-----HHHHHHcCCe
Confidence 3455677777766 998631 2344444555777777777664 49999976 456553 1456778876
Q ss_pred EEEEeceecCCCCCCCHHHHHHHhhhcCC--eEE-EEcCCCC-CC-CCCHHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 224 FESMPYRLDESTGLVDYDMLEKTAILFRP--KLI-IAGASAY-PR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 224 ~~~~~~~~~~~~~~iD~d~le~~i~~~~~--klI-i~~~s~~-~~-~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
..+++..++++...+|++++++.++++.+ .++ +...+.| |. ..|+++|+++|++||+++++|+||...+.....+
T Consensus 186 Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~l 265 (501)
T 3hl2_A 186 PVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHL 265 (501)
T ss_dssp EEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHH
T ss_pred EEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhh
Confidence 55555445544568999999999987533 233 3344555 43 4799999999999999999999998655332212
Q ss_pred c-CCCC-C-CcEEEEcCcCcCccCcEE-EEEEeCCCCchhHHHHHHhhccCCcccc
Q 018300 299 A-DPFK-Y-CDVVTTTTHKSLRGPRGG-MIFFKKDPVLGVELESAINNAVFPGLQV 350 (358)
Q Consensus 299 ~-~pl~-g-aDiv~~S~hK~L~Gp~GG-~I~~~~~~~~~~~~~~~i~~~~f~g~q~ 350 (358)
| ..++ | +|+++.|+||++..|-|| +++++++ ++.+++.. .+||-+.
T Consensus 266 p~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~-----e~l~~~~~-~yPGr~S 315 (501)
T 3hl2_A 266 IQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND-----SFIQEISK-MYPGRAS 315 (501)
T ss_dssp HHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH-----HHHHHHHH-TSCSCBC
T ss_pred HHHHHhcCCCcEEEecccccceeecCceEEEeCCH-----HHHHHHHH-hCCCCCC
Confidence 2 2234 6 999999999999888665 5556665 66666643 5666653
No 173
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.54 E-value=1.2e-13 Score=137.36 Aligned_cols=224 Identities=17% Similarity=0.204 Sum_probs=133.0
Q ss_pred ccccccChH-HHHHHHHHHHHhh-hcccccc-------cCCCCcHHHHHHHhhhh--hcccCCCCCCCcCCCCcHHHHHH
Q 018300 81 YSLGEADPE-VCEIITKEKERQF-KSLELIA-------SENFTSRAVMEAVGSCL--TNKYSEGLPGKRYYGGNEYIDEL 149 (358)
Q Consensus 81 ~~l~~~d~~-~~~~i~~e~~~~~-~~i~lia-------s~n~~s~~V~~al~~~l--~~~~~~G~pg~r~~~G~~~~~~l 149 (358)
.++...++. ++.+.++-+...+ ..++|-. +..++.+.|.+++.... ......+|+. ..|.+ ++
T Consensus 26 ~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~---~~G~~---~l 99 (448)
T 3meb_A 26 SGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPP---VAGFP---LF 99 (448)
T ss_dssp TTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCC---TTCCH---HH
T ss_pred hcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCC---CcchH---HH
Confidence 455665554 5666555443333 2355532 22345678888865443 1122223332 22332 34
Q ss_pred HHHHHHHHHHHc-CCC-----CCCCcceEEeCCCHHHHHH--HHHHhccCCCEEEecCCCCCcccccccccchhccc---
Q 018300 150 ETLCQKRALAAF-NLD-----ENKWGVNVQPLSGSPANFE--VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS--- 218 (358)
Q Consensus 150 E~~~~~~la~lf-g~~-----~~~~~v~V~~~SGt~A~~~--a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~--- 218 (358)
++. +++++ |.+ ++++ +.+++.+|+.|+.. .+.++++|||+|+++++.|.+|.. .+.
T Consensus 100 r~~----ia~~l~g~~~~~~~~~~i-~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~~ 166 (448)
T 3meb_A 100 LEA----AQFLMFGKDSKAAQEGRI-ASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYG--------IYDKVF 166 (448)
T ss_dssp HHH----HHHHHHCTTCHHHHTTCE-EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHH--------HHHHHH
T ss_pred HHH----HHHHhcCCCccccCcCcE-EEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHH--------HHHhhH
Confidence 443 44444 876 3321 11126677889877 556778999999999987766532 233
Q ss_pred -cCCceEEEEecee-cCC-CCCCCHHHHHHHhhhc--CCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccc
Q 018300 219 -GTSIYFESMPYRL-DES-TGLVDYDMLEKTAILF--RPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAH 288 (358)
Q Consensus 219 -~~g~~~~~~~~~~-~~~-~~~iD~d~le~~i~~~--~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah 288 (358)
..|.. ++++++ +++ ++.+|++++++.++.. +++++++..+++| ...+ +++|+++|+++|+++++|++|
T Consensus 167 ~~~G~~--v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay 244 (448)
T 3meb_A 167 NKLKVP--YKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAY 244 (448)
T ss_dssp CTTTSC--CEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred HhCCCe--EEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 45653 444555 444 5789999999988752 4567777666665 3455 666999999999999999997
Q ss_pred cccccccCC----cc-CCC-C-CCc-EEEEcCcCcC--ccCcEEEE--EE
Q 018300 289 ISGLVAASV----VA-DPF-K-YCD-VVTTTTHKSL--RGPRGGMI--FF 326 (358)
Q Consensus 289 ~~Gl~~~g~----~~-~pl-~-gaD-iv~~S~hK~L--~Gp~GG~I--~~ 326 (358)
. ++...+. .. ..+ + +.+ +++.|+||++ .|.|-|++ ++
T Consensus 245 ~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~ 293 (448)
T 3meb_A 245 Q-GFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVH 293 (448)
T ss_dssp T-TTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEEC
T ss_pred c-cccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeee
Confidence 6 3333221 00 011 1 333 7789999987 46676887 55
No 174
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.54 E-value=6.8e-14 Score=135.59 Aligned_cols=196 Identities=18% Similarity=0.147 Sum_probs=118.9
Q ss_pred CcHHHHHHHhh-hhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCCHHHHHHHH--HHh
Q 018300 114 TSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGSPANFEVY--TAI 188 (358)
Q Consensus 114 ~s~~V~~al~~-~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~--~~~~~~v~V~~~SGt~A~~~a~--~al 188 (358)
+++.|++++.. .+.+....+|+. ..|.+ ++++.+.+++....+. +++.+ ..+++++|++|+..++ .++
T Consensus 45 ~~~~v~~a~~~~~~~~~~~~~y~~---~~g~~---~lr~~la~~~~~~~~~~~~~~~~-~i~~t~g~~~a~~~~~~~~~~ 117 (397)
T 3fsl_A 45 QLQAVAEAEARLNAQPHGASLYLP---MEGLN---CYRHAIAPLLFGADHPVLKQQRV-ATIQTLGGSGALKVGADFLKR 117 (397)
T ss_dssp CCHHHHHHHHHHHHSCCCCCCCCC---TTCCH---HHHHHHHHHHHCTTCHHHHTTCE-EEEEESHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHhhccCccccccCCC---CCchH---HHHHHHHHHHhcCCcccccccce-EEEEcCCcHHHHHHHHHHHHh
Confidence 34899999988 665433334443 12332 3444433333322221 22100 0244455667998884 566
Q ss_pred ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCC--C
Q 018300 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--R 264 (358)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~s~~~--~ 264 (358)
++|||+|++.++.|.++.. .+...|..+..+++. +++++.+|++++++.++.. +++++++..+++| .
T Consensus 118 ~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~ 188 (397)
T 3fsl_A 118 YFPESGVWVSDPTWENHVA--------IFAGAGFEVSTYPWY-DEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGA 188 (397)
T ss_dssp HCTTCCEEEESSCCHHHHH--------HHHHTTCCEEEECCE-ETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCC
T ss_pred cCCCCeEEEeCCCchhHHH--------HHHHcCCceEEEeee-eccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCc
Confidence 8999999999876655421 234456544444431 2245789999999998742 4567777655554 4
Q ss_pred CCC---HHHHHHHHHHcCCEEEEeccccccccccC--CccC--CC-C--CCcEEEEcCcCcC--ccCcEEEEEE
Q 018300 265 DFD---YPRMRQIADAVGALLMMDMAHISGLVAAS--VVAD--PF-K--YCDVVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 265 ~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g--~~~~--pl-~--gaDiv~~S~hK~L--~Gp~GG~I~~ 326 (358)
..+ +++|+++|+++|+++++|++|. ++...+ ..+. .+ + ...+++.|++|++ +|.|.|+++.
T Consensus 189 ~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~ 261 (397)
T 3fsl_A 189 DLTNDQWDAVIEILKARELIPFLDIAYQ-GFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSV 261 (397)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEESCT-TSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEE
T ss_pred CCCHHHHHHHHHHHHhCCEEEEEecCch-hhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEE
Confidence 544 6689999999999999999986 333221 0110 11 1 3458889999997 4677798876
No 175
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.54 E-value=7.6e-14 Score=141.28 Aligned_cols=195 Identities=13% Similarity=0.039 Sum_probs=123.6
Q ss_pred CCCcHHHHHHHhhhhhccc---CCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC-C--CCCCCcceEEeCC-CHHHHHHH
Q 018300 112 NFTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFN-L--DENKWGVNVQPLS-GSPANFEV 184 (358)
Q Consensus 112 n~~s~~V~~al~~~l~~~~---~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg-~--~~~~~~v~V~~~S-Gt~A~~~a 184 (358)
+..|..+.+++...+.... ..+|+. ..|.. ++++.+.+++.+.+| . +++ +|++++ +++|+..+
T Consensus 100 ~~~P~~~~~~~~~~l~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~gG~~~~~~----~i~~t~G~~~ai~~~ 169 (498)
T 3ihj_A 100 PSFPEDAKKRARRILQACGGNSLGSYSA---SQGVN---CIREDVAAYITRRDGGVPADPD----NIYLTTGASDGISTI 169 (498)
T ss_dssp SSSCHHHHHHHHHHHHHC-------------CCSCH---HHHHHHHHHHHHHTTTCCCCGG----GEEEESSHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHhccCCCCCCCCC---CCCHH---HHHHHHHHHHHHhcCCCCCCcc----cEEEcCCHHHHHHHH
Confidence 3345566666655554421 123433 22433 566666777777775 4 333 344454 55699999
Q ss_pred HHHhccCCC----EEEecCCCCCcccccccccchhccccCCceEEEEeceecCC-CCCCCHHHHHHHhhhc----CCeEE
Q 018300 185 YTAILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF----RPKLI 255 (358)
Q Consensus 185 ~~all~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iD~d~le~~i~~~----~~klI 255 (358)
+.+++++|| +|+++++.|.++.. .+...|. ++++|+++++ +..+|+++|++.++.. ++|+|
T Consensus 170 ~~~l~~~gd~~~d~Vlv~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i 239 (498)
T 3ihj_A 170 LKILVSGGGKSRTGVMIPIPQYPLYSA--------VISELDA--IQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVL 239 (498)
T ss_dssp HHHHCCCCGGGSEEEEEEESCCTHHHH--------HHHHTTC--EEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHcCCCCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEE
Confidence 999999876 99999887765421 2345565 4556666654 3489999999998754 47888
Q ss_pred EEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC------C------C-cEEEEcCcCcC-
Q 018300 256 IAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------Y------C-DVVTTTTHKSL- 316 (358)
Q Consensus 256 i~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~------g------a-Div~~S~hK~L- 316 (358)
++..+++| ...+ +++|+++|+++|++|++|++|.......+....++. + . -+++.|++|++
T Consensus 240 ~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 319 (498)
T 3ihj_A 240 CIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYM 319 (498)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTT
T ss_pred EEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccc
Confidence 77666655 3444 677999999999999999998744332221111221 1 1 15678999998
Q ss_pred --ccCcEEEEEE
Q 018300 317 --RGPRGGMIFF 326 (358)
Q Consensus 317 --~Gp~GG~I~~ 326 (358)
+|.|+|+++.
T Consensus 320 G~~G~R~G~~~~ 331 (498)
T 3ihj_A 320 GECGYRGGYMEV 331 (498)
T ss_dssp CCSSSCCEEEEE
T ss_pred cCcccceEEEEE
Confidence 4888999984
No 176
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.53 E-value=5.6e-14 Score=137.85 Aligned_cols=222 Identities=14% Similarity=0.051 Sum_probs=139.0
Q ss_pred ccccccChHHHHHHHHHHHHhhhcccccccCCC-----CcHHHHHHHh--hhhhcc-cCCCCCCCcCCCCcHHHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVG--SCLTNK-YSEGLPGKRYYGGNEYIDELETL 152 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~~~~i~lias~n~-----~s~~V~~al~--~~l~~~-~~~G~pg~r~~~G~~~~~~lE~~ 152 (358)
.+++++.+.++..+.+...+ ...++|-.+... +++.+++++. ..+.+. ...+||+. ..|.+ +
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~--~~g~~---~---- 74 (423)
T 3ez1_A 5 EASRPALDLARQAYEAFKAR-GLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGG--VAGLP---S---- 74 (423)
T ss_dssp -CCHHHHHHHHHHHHHHHHH-TCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSC--TTCCH---H----
T ss_pred HHHHHHHHHHHHHHHHhhcC-CceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCC--CCChH---H----
Confidence 35667778888777664443 345666533332 4557888775 333211 11234221 12222 3
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCC-HHHHH--HHHHHhcc--C---------CCEEEecCCCCCcccccccccchhccc
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSG-SPANF--EVYTAILK--P---------HDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~--~a~~all~--p---------GD~Vl~~~~~~ggh~s~~~~~~~~~~~ 218 (358)
.++.++++++++++ +|++++| ++|+. .++.++++ | ||+|++.++.|.++.. .+.
T Consensus 75 lr~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~ 142 (423)
T 3ez1_A 75 ARALFAGYLDVKAE----NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFL--------LLQ 142 (423)
T ss_dssp HHHHHHHHTTSCGG----GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHH--------HHH
T ss_pred HHHHHHHHhCCChh----hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHH--------HHH
Confidence 34557888998874 3555555 55887 78888877 8 5999998876655421 233
Q ss_pred cCCceEEEEeceecCCCCCCCHHHHHHHhh-hcCCeEEEEc-CCCC--CCCCCHH---HHHHHH-HHcCCEEEEeccccc
Q 018300 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAI-LFRPKLIIAG-ASAY--PRDFDYP---RMRQIA-DAVGALLMMDMAHIS 290 (358)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~iD~d~le~~i~-~~~~klIi~~-~s~~--~~~~dl~---~I~~ia-~e~g~~livD~Ah~~ 290 (358)
..|. ++++++++++ .+|+++|++.++ ..++++|++. .+++ |...+.+ +|.++| +++|+++++|++|..
T Consensus 143 ~~g~--~~~~v~~~~~--g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~ 218 (423)
T 3ez1_A 143 TLGF--ELLTVDMQSD--GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRV 218 (423)
T ss_dssp HHTC--EEEEEEEETT--EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSS
T ss_pred HcCC--EEEeccCCCC--CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcch
Confidence 4565 4455556643 499999999885 3468888764 3444 4566665 888888 899999999999874
Q ss_pred ccccc-CCc-c-CCC------C--CCcEEEEcCcCc-CccCcEEEEEEeC
Q 018300 291 GLVAA-SVV-A-DPF------K--YCDVVTTTTHKS-LRGPRGGMIFFKK 328 (358)
Q Consensus 291 Gl~~~-g~~-~-~pl------~--gaDiv~~S~hK~-L~Gp~GG~I~~~~ 328 (358)
..... +.. + +.+ + +.++++.|++|+ ++|.+.|+++.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 268 (423)
T 3ez1_A 219 HHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE 268 (423)
T ss_dssp CBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH
T ss_pred hhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH
Confidence 32222 111 1 111 1 456889999996 5778889999887
No 177
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.28 E-value=8e-16 Score=149.68 Aligned_cols=193 Identities=16% Similarity=0.127 Sum_probs=127.8
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEe-CCCHHHHHHHHHHhc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQP-LSGSPANFEVYTAIL 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~-~SGt~A~~~a~~all 189 (358)
.+++.+++++...+... ..+|+. + ..++++.+.+++.+.+| .+.+ +|++ ++|++|+..++.+++
T Consensus 44 ~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~~~a~~~~~~~~~ 110 (392)
T 3b1d_A 44 EVMPEVKQAIHDYAEQL-VYGYTY-----A---SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGVVPAISIAIQAFT 110 (392)
Confidence 45788999887766431 123322 1 34566666777777777 4443 3444 455779999999999
Q ss_pred cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCC--CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CC
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKLIIAGASAYP--RD 265 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~iD~d~le~~i~~~~~klIi~~~s~~~--~~ 265 (358)
++||+|++.++.|.++.. .+...|. +++.+++++++ ..+|++++++.++..++++|++..++++ ..
T Consensus 111 ~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~ 180 (392)
T 3b1d_A 111 KEGEAVLINSPVYPPFAR--------SVRLNNR--KLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRV 180 (392)
Confidence 999999998876665432 2233444 34444453222 3589999999886447888877655544 33
Q ss_pred C---CHHHHHHHHHHcCCEEEEeccccccccccCCccCCC-------CCCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------KYCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 266 ~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl-------~gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
. ++++|.++|+++|+++++|++|.. +...+..+.++ .+.++++.|++|++ +|.+.|+++++++
T Consensus 181 ~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 255 (392)
T 3b1d_A 181 WEREVLEQIGHLCQKHHVILVSDEIHQD-LTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP 255 (392)
Confidence 3 489999999999999999999874 33322111111 12348889999997 5678899998754
No 178
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.52 E-value=6.2e-14 Score=135.97 Aligned_cols=184 Identities=13% Similarity=0.030 Sum_probs=119.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccC--
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP-- 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~p-- 191 (358)
.+|.|.+++...+.. +..+ ...+ ..+...+ +++++++++|.+. .++++||++|+..++..+..+
T Consensus 53 ~~p~v~~a~~~~~~~-~~~~--~~~~--~~~~~~~----l~~~la~~~g~~~-----v~~~~~gt~a~~~al~~~~~~~~ 118 (392)
T 3ruy_A 53 RHPKIINALIDQANR-VTLT--SRAF--HSDQLGP----WYEKVAKLTNKEM-----VLPMNTGAEAVETAIKTARRWAY 118 (392)
T ss_dssp TCHHHHHHHHHHHTT-CSCC--CTTS--EETTHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccc--cccc--CCHHHHH----HHHHHHHhcCCCE-----EEEeCcHHHHHHHHHHHHHHhhh
Confidence 579999999877643 2111 1111 1232233 4566888998432 466778999999999877544
Q ss_pred --------CCEEEecCCCCCcccccccccchhccccCCc----------eEEEEeceecCCCCCCCHHHHHHHhhhcCCe
Q 018300 192 --------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (358)
Q Consensus 192 --------GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~----------~~~~~~~~~~~~~~~iD~d~le~~i~~~~~k 253 (358)
||+|++.++.|.|..... ....+. ..+...++ ..|+++|++.++ .+++
T Consensus 119 ~~~~~~~~~~~vi~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~-~~~~ 184 (392)
T 3ruy_A 119 DVKKVEANRAEIIVCEDNFHGRTMGA-------VSMSSNEEYKRGFGPMLPGIIVIP------YGDLEALKAAIT-PNTA 184 (392)
T ss_dssp HTSCCCTTCCEEEEETTCCCCSSHHH-------HHTCSCTTTTTTCCSCCSSEEEEC------TTCHHHHHHHCC-TTEE
T ss_pred hccCCCCCCcEEEEEcCCcCCCCHhh-------hhccCChhhccccCCCCCCCeeeC------cccHHHHHHHhc-cCeE
Confidence 789999887765532110 001000 00111211 238999999887 4789
Q ss_pred EEEEcCCCC--CCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCcc--CcEE
Q 018300 254 LIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRGG 322 (358)
Q Consensus 254 lIi~~~s~~--~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~G--p~GG 322 (358)
+|++.++++ |...+ +++|.++|+++|++|++|++|+ |+...+.. . ...+ ..|++++| |+|+| .++|
T Consensus 185 ~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G 261 (392)
T 3ruy_A 185 AFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQT-GLGRTGKVFACDWDNVTPDMYILG--KALGGGVFPIS 261 (392)
T ss_dssp EEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCE
T ss_pred EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCccccchhhhccCCCCCEEEEc--hhhhCChhhhE
Confidence 998866554 55676 9999999999999999999995 44333321 1 1112 46888775 99987 7899
Q ss_pred EEEEeC
Q 018300 323 MIFFKK 328 (358)
Q Consensus 323 ~I~~~~ 328 (358)
++++++
T Consensus 262 ~~~~~~ 267 (392)
T 3ruy_A 262 CAAANR 267 (392)
T ss_dssp EEEECH
T ss_pred EEEECH
Confidence 999876
No 179
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.52 E-value=1.3e-13 Score=133.92 Aligned_cols=195 Identities=17% Similarity=0.099 Sum_probs=124.1
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc--c
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--K 190 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--~ 190 (358)
+.++.|++++...+.... .+ . +.| ..+ ..+.+++++++++|.+.+ ..+++++|++|+..++.++. .
T Consensus 61 ~~~~~v~~a~~~~~~~~~-~~--~-~~~-~~~----~~~~l~~~la~~~~~~~~---~v~~~~gg~~a~~~al~~~~~~~ 128 (395)
T 1vef_A 61 HGNPEVVEAVKRQAETLM-AM--P-QTL-PTP----MRGEFYRTLTAILPPELN---RVFPVNSGTEANEAALKFARAHT 128 (395)
T ss_dssp BTCHHHHHHHHHHHHHCC-CC--C-TTS-CCH----HHHHHHHHHHHTSCTTEE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCC-CC--c-ccc-CCH----HHHHHHHHHHHhcCCCcC---EEEEcCcHHHHHHHHHHHHHHHh
Confidence 478999999988775421 11 1 122 223 233356678899987543 23556678889999998764 6
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceE----------EEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF----------ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s 260 (358)
+||+|+++++.+.+.... .+...|... +...++ ..|+++|++.++. ++++|++++.
T Consensus 129 ~~~~vi~~~~~y~~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~------~~d~~~l~~~i~~-~~~~v~~~~~ 194 (395)
T 1vef_A 129 GRKKFVAAMRGFSGRTMG-------SLSVTWEPKYREPFLPLVEPVEFIP------YNDVEALKRAVDE-ETAAVILEPV 194 (395)
T ss_dssp SCCEEEEETTCCCCSSHH-------HHHTCCCHHHHGGGCSCSSCEEEEC------TTCHHHHHHHCCT-TEEEEEECSE
T ss_pred CCCeEEEEcCCcCCCchh-------hhhhcCCcccccccCCCCCCeeEeC------CCcHHHHHHHhcc-CEEEEEEeCc
Confidence 899999887755432110 112222210 011111 2589999998864 6888888764
Q ss_pred C--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCcc-CcEEEEEEeCCC
Q 018300 261 A--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDP 330 (358)
Q Consensus 261 ~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~~~ 330 (358)
+ .|...+ +++|.++|+++|++|++|++|+ |+...+.. + ...+ +.|++ |+||+|++ .+.|++++++
T Consensus 195 ~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~-- 269 (395)
T 1vef_A 195 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMRE-- 269 (395)
T ss_dssp ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEH--
T ss_pred cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehH--
Confidence 3 455667 9999999999999999999998 54322221 1 1122 57877 55999865 4568888887
Q ss_pred CchhHHHHHHhh
Q 018300 331 VLGVELESAINN 342 (358)
Q Consensus 331 ~~~~~~~~~i~~ 342 (358)
++.+++..
T Consensus 270 ----~~~~~l~~ 277 (395)
T 1vef_A 270 ----EVARSMPK 277 (395)
T ss_dssp ----HHHHTSCT
T ss_pred ----HHHhhhcc
Confidence 45555543
No 180
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.52 E-value=1.1e-13 Score=134.55 Aligned_cols=191 Identities=18% Similarity=0.131 Sum_probs=121.8
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
.+|.|.+++...+..... + +.. + ..+.. ...++++++++|.+. .+++++|++|+..++.++..
T Consensus 56 ~~p~v~~a~~~~~~~~~~--~-~~~-~-~~~~~----~~l~~~la~~~~~~~-----v~~~~gg~~a~~~al~~~~~~~~ 121 (406)
T 4adb_A 56 AHPELREALNEQASKFWH--T-GNG-Y-TNEPV----LRLAKKLIDATFADR-----VFFCNSGAEANEAALKLARKFAH 121 (406)
T ss_dssp TCHHHHHHHHHHHTTCSC--C-CTT-S-CCHHH----HHHHHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--c-cCC-c-CCHHH----HHHHHHHHhhCCCCe-----EEEeCcHHHHHHHHHHHHHHHHH
Confidence 488999999877654221 1 111 2 22322 235567889998763 35677889999999988765
Q ss_pred ----CC-CEEEecCCCCCcccccccccchhccccCCc----------eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEE
Q 018300 191 ----PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (358)
Q Consensus 191 ----pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~----------~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klI 255 (358)
+| |+|++.++.+.++... .....+. ..+...++ ..|+++|++.++ .++++|
T Consensus 122 ~~~~~g~~~vi~~~~~y~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~-~~~~~v 187 (406)
T 4adb_A 122 DRYGSHKSGIVAFKNAFHGRTLF-------TVSAGGQPAYSQDFAPLPADIRHAA------YNDINSASALID-DSTCAV 187 (406)
T ss_dssp HHTCTTCCEEEEETTCCCCSSHH-------HHHHSSCGGGTGGGCSCCSSEEEEC------TTCHHHHHTTCS-TTEEEE
T ss_pred hcCCCCCcEEEEECCCcCCCcHH-------HhhccCCccccccCCCCCCCceEeC------CCcHHHHHHHhc-CCeEEE
Confidence 66 9999988766554211 0111110 00111111 248999999886 478999
Q ss_pred EEcCCCCC--CC-----CCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCcEEEE
Q 018300 256 IAGASAYP--RD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMI 324 (358)
Q Consensus 256 i~~~s~~~--~~-----~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~GG~I 324 (358)
++. +++| .. .++++|.++|+++|++|++|++|+ |+...+... ..++ ..|++++ +|+++ |.++|++
T Consensus 188 ~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~ 263 (406)
T 4adb_A 188 IVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLTT--AKALGGGFPVGAL 263 (406)
T ss_dssp EEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEE
T ss_pred EEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEEe--chhhcCCCCeEEE
Confidence 888 4444 22 368999999999999999999997 554333211 1112 4688754 89985 4578999
Q ss_pred EEeCCCCchhHHHHHHhh
Q 018300 325 FFKKDPVLGVELESAINN 342 (358)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~ 342 (358)
++++ ++.+++..
T Consensus 264 ~~~~------~~~~~~~~ 275 (406)
T 4adb_A 264 LATE------ECARVMTV 275 (406)
T ss_dssp EECH------HHHHTCCT
T ss_pred EEcH------HHHhhhcc
Confidence 8877 56555544
No 181
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.51 E-value=8.2e-15 Score=140.07 Aligned_cols=195 Identities=11% Similarity=0.065 Sum_probs=123.4
Q ss_pred cccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCC-C---CcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCC--
Q 018300 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-G---GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-- 177 (358)
Q Consensus 104 ~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~-~---G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SG-- 177 (358)
.+.+.+++..+|+.|++++.+.+.+. ..++...| . +... .++.+.+++++++++|++..+ +|.+++|
T Consensus 4 ~~~~~~g~~~~p~~v~~a~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~~---~v~~~~g~g 76 (360)
T 1w23_A 4 VFNFNAGPSALPKPALERAQKELLNF---NDTQMSVMELSHRSQSY-EEVHEQAQNLLRELLQIPNDY---QILFLQGGA 76 (360)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSS---TTSSSCGGGSCTTSHHH-HHHHHHHHHHHHHHHTCCTTE---EEEEESSHH
T ss_pred eEeecCCCcCCCHHHHHHHHHHhhhh---ccccccccccCCCCHHH-HHHHHHHHHHHHHHhCCCCCc---eEEEECCcc
Confidence 35666777889999999998876532 11221111 0 2222 233444788899999996321 3444444
Q ss_pred HHHHHHHHHHhccC---CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHH-HhhhcCCe
Q 018300 178 SPANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPK 253 (358)
Q Consensus 178 t~A~~~a~~all~p---GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~-~i~~~~~k 253 (358)
++|+.+++.+++.+ ||.|++..+ +|.+. ..+...| .+ +.++++++++.+|++++++ .+. .++|
T Consensus 77 t~al~~~~~~l~~~~~~g~~vi~~~~---~~~~~------~~~~~~g-~~--~~v~~~~~~~~~d~~~l~~~~i~-~~~k 143 (360)
T 1w23_A 77 SLQFTMLPMNLLTKGTIGNYVLTGSW---SEKAL------KEAKLLG-ET--HIAASTKANSYQSIPDFSEFQLN-ENDA 143 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHH---HHHHH------HHHHTTS-EE--EEEEECGGGTSCSCCCGGGCCCC-TTEE
T ss_pred hHHHHHHHHHhcCCCCcccEEEecch---hHHHH------HHHHHhC-Ce--EEeecccccCcCCccchHhhccC-CCCC
Confidence 67999999998765 556665443 22111 1123445 44 4445654355689999988 764 3789
Q ss_pred EEEEcCCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCcE-EEEEEeCC
Q 018300 254 LIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (358)
Q Consensus 254 lIi~~~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~G-G~I~~~~~ 329 (358)
+|++..+++ |...+ ++++++|++|++|++|+.|.. +.++...|++++|+||+++ |.| |+++++++
T Consensus 144 ~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~-----~~~~~~~di~~~s~sK~~~-~~G~G~~~~~~~ 211 (360)
T 1w23_A 144 YLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSR-----PLKVNQFGMIYAGAQKNLG-PSGVTVVIVKKD 211 (360)
T ss_dssp EEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSS-----CCCGGGCSEEEEETTTTTS-CTTCEEEEEEHH
T ss_pred EEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCC-----CcCcccCCEEEEEcccccC-CCCcEEEEEcHH
Confidence 888765443 44555 333489999999999986642 2223334899999999875 656 99998873
No 182
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.50 E-value=1.8e-14 Score=143.10 Aligned_cols=190 Identities=16% Similarity=0.188 Sum_probs=117.8
Q ss_pred HHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhccC----
Q 018300 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP---- 191 (358)
Q Consensus 116 ~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~p---- 191 (358)
+.|++++...+.. |. ..|+..+...++ ++++++++|.+. .++++|||+|+..++.++.++
T Consensus 53 ~~v~~a~~~~l~~----~~---~~y~~~~~~~~l----~~~la~~~~~~~-----v~~t~~gt~A~~~al~~~~~~~~~~ 116 (467)
T 2oqx_A 53 GAVTQSMQAAMMR----GD---EAYSGSRSYYAL----AESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQE 116 (467)
T ss_dssp SCCCHHHHHHTTS----CC---CCSSSCHHHHHH----HHHHHHHHCCSE-----EEEEC--CCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc----Cc---ceeccCchhHHH----HHHHHHHhCcCc-----EEEcCCcHHHHHHHHHHHhcccccc
Confidence 7778887766532 11 123334433444 456888888754 356778999999999999888
Q ss_pred -C----CEEEecCCCCCcccccccccchhccccCCceEEEE----eceec---CCCCCCCHHHHHHHhhh---cCCeEEE
Q 018300 192 -H----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM----PYRLD---ESTGLVDYDMLEKTAIL---FRPKLII 256 (358)
Q Consensus 192 -G----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~----~~~~~---~~~~~iD~d~le~~i~~---~~~klIi 256 (358)
| |+|++. ..|+.. +. ......+...... +++.+ +.++.+|+++|++.++. .++++|+
T Consensus 117 ~G~~~~d~Ii~~-~~h~~t--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi 188 (467)
T 2oqx_A 117 KGLDRSKMVAFS-NYFFDT--TQ-----GHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIV 188 (467)
T ss_dssp HCCCTTTCEEEE-SSCCHH--HH-----HHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEE
T ss_pred CCCCccceEEec-cccccc--ch-----hhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEE
Confidence 9 997765 333211 00 0011122211100 11111 13457899999999874 3688888
Q ss_pred EcCCCC---CCCC---CHHHHHHHHHHcCCEEEEeccccc-ccc--------ccCCccCCC-----CCCcEEEEcCcCcC
Q 018300 257 AGASAY---PRDF---DYPRMRQIADAVGALLMMDMAHIS-GLV--------AASVVADPF-----KYCDVVTTTTHKSL 316 (358)
Q Consensus 257 ~~~s~~---~~~~---dl~~I~~ia~e~g~~livD~Ah~~-Gl~--------~~g~~~~pl-----~gaDiv~~S~hK~L 316 (358)
+..+++ |... ++++|+++|++||++|++|++|+. +.. ..+.....+ .++|++++|+||++
T Consensus 189 ~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~ 268 (467)
T 2oqx_A 189 ATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDA 268 (467)
T ss_dssp EESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTT
T ss_pred EeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEeccccc
Confidence 876554 3343 478999999999999999999876 432 222111111 24788899999999
Q ss_pred ccCcEEEEEEeCC
Q 018300 317 RGPRGGMIFFKKD 329 (358)
Q Consensus 317 ~Gp~GG~I~~~~~ 329 (358)
+.|.||+++++++
T Consensus 269 g~~~Gg~~~~~~~ 281 (467)
T 2oqx_A 269 MVPMGGLLCMKDD 281 (467)
T ss_dssp CCSSCEEEEECSG
T ss_pred CCCCceEEEecCh
Confidence 7777899888764
No 183
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.50 E-value=1.3e-13 Score=140.68 Aligned_cols=194 Identities=13% Similarity=0.081 Sum_probs=124.3
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceEEeC-CCHHHHHHHHHH----
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPL-SGSPANFEVYTA---- 187 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg--~~~~~~~v~V~~~-SGt~A~~~a~~a---- 187 (358)
++.+++++...+.. .+|+.. ..|.+ ++++.+.+++.+.++ ...... .+|+++ +|++|+..++.+
T Consensus 117 ~~~~v~a~~~~~~~---~~y~~~--~~g~~---~lr~~ia~~l~~~~~~~~~~~~~-~~i~~t~G~t~al~~~~~~l~~~ 187 (533)
T 3f6t_A 117 RDKVVAEWVNGAVA---NNYPVP--DRCLV---NTEKIINYFLQELSYKDANLAEQ-TDLFPTEGGTAAIVYAFHSLAEN 187 (533)
T ss_dssp HHHHHHHHHHHHHT---CSCCSS--SSCCH---HHHHHHHHHHHHHHTTTCCCGGG-EEEEEEEHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHh---CCCCCC--cccHH---HHHHHHHHHHHHhcCCCCCCCCc-ceEEEECCHHHHHHHHHHHhhhh
Confidence 56666666555432 123210 12333 566666666765523 222100 134444 556799999988
Q ss_pred -hccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceec-CCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--C
Q 018300 188 -ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGASAY--P 263 (358)
Q Consensus 188 -ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~ 263 (358)
+++|||+|++.++.|.++.. .+...|..+..++++.+ ++++.+|+++|++.+.. ++++|++..+++ |
T Consensus 188 ~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k~v~l~~p~NPtG 258 (533)
T 3f6t_A 188 HLLKKGDKIAINEPIFTPYLR--------IPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-SIKALIVVNPTNPTS 258 (533)
T ss_dssp TSSCTTCEEEEESSCCHHHHT--------SGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT-TEEEEEEESSCTTTC
T ss_pred hccCCcCEEEEcCCCcHHHHH--------HHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-CCeEEEEeCCCCCCc
Confidence 78999999999987766532 22345654555554332 23467999999998764 788888765555 4
Q ss_pred CCCCHH---HHHHHHH-HcCCEEEEeccccccccccCCccCCC--C-CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 264 RDFDYP---RMRQIAD-AVGALLMMDMAHISGLVAASVVADPF--K-YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 264 ~~~dl~---~I~~ia~-e~g~~livD~Ah~~Gl~~~g~~~~pl--~-gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
...+.+ +|+++|+ ++|+++++|++|. ++.... +... . +.++++.|++|++ .|.|.|+++++++
T Consensus 259 ~~~~~~~l~~l~~la~~~~~~~li~De~y~-~~~~~~--~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 259 KEFDTNALNAIKQAVEKNPKLMIISDEVYG-AFVPNF--KSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEK 330 (533)
T ss_dssp BCCCHHHHHHHHHHHHHCTTCEEEEECTTG-GGSTTC--CCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred cccCHHHHHHHHHHHHhCCCCEEEEcCCcc-ccccCc--cCHhhcCCCCEEEEecCcccCCCcccceEEEEECcH
Confidence 466655 7888888 6899999999987 444321 1111 1 3459999999997 5777899999886
No 184
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.50 E-value=2.9e-13 Score=133.75 Aligned_cols=226 Identities=16% Similarity=0.170 Sum_probs=141.7
Q ss_pred ccccccChH-HHHHHHHHHHHhh-hcccccccC-------CCCcHHHHHHHhhhh-hcccCCCCCCCcCCCCcHHHHHHH
Q 018300 81 YSLGEADPE-VCEIITKEKERQF-KSLELIASE-------NFTSRAVMEAVGSCL-TNKYSEGLPGKRYYGGNEYIDELE 150 (358)
Q Consensus 81 ~~l~~~d~~-~~~~i~~e~~~~~-~~i~lias~-------n~~s~~V~~al~~~l-~~~~~~G~pg~r~~~G~~~~~~lE 150 (358)
.++...+|. ++.+.++.+.... +-|+|--++ .++++.|.+++. .+ ......+|+. ..|.+ ++.
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~---~~G~~---~lr 78 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLL---GNGTE---DFS 78 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCT---TSSCH---HHH
T ss_pred hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCC---CCCcH---HHH
Confidence 567777776 5666655444333 556765332 346889999876 32 2222334543 23444 566
Q ss_pred HHHHHHHHHHcCCCC-CCCcce-EEeCCCHHHHHHHHHHhcc--CCCEEEecCCCCCcccccccccchhccccCCceEEE
Q 018300 151 TLCQKRALAAFNLDE-NKWGVN-VQPLSGSPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (358)
Q Consensus 151 ~~~~~~la~lfg~~~-~~~~v~-V~~~SGt~A~~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (358)
+.+.+++....+... .++ ++ +++.+|+.|+..++.++.+ | |+|++++|.|.+|.. .+...|. ++
T Consensus 79 ~aia~~~~~~~~~~~~~~~-i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~--------~~~~~g~--~~ 146 (405)
T 3k7y_A 79 TLTQNLIFGNNSKYIEDKK-ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVN--------MIESRGF--NL 146 (405)
T ss_dssp HHHHHHHHCSSCTTTTTTC-EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHH--------HHHTTTC--EE
T ss_pred HHHHHHHcCCCCccccccc-eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHH--------HHHHcCC--eE
Confidence 665555543333221 111 22 3445566799999988877 9 999999987766532 3345676 44
Q ss_pred Eecee-cCCCCCCCHHHHHHHhhhc-CCeEEEEcCC-CCCC--CCC---HHHHHHHHHHcCCEEEEeccccccccccCCc
Q 018300 227 MPYRL-DESTGLVDYDMLEKTAILF-RPKLIIAGAS-AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (358)
Q Consensus 227 ~~~~~-~~~~~~iD~d~le~~i~~~-~~klIi~~~s-~~~~--~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~ 298 (358)
+++++ ++++..+|++++++.+... ++++|+++.+ +||+ ..+ +++|.++|+++|+++++|++|. ++...+..
T Consensus 147 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~-~l~~~~~~ 225 (405)
T 3k7y_A 147 KYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQ-GFGHTNLE 225 (405)
T ss_dssp EEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCT-TTSSSSTT
T ss_pred EEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcc-cccCCCcc
Confidence 55545 3345689999999988653 4578888754 5654 444 6778899999999999999965 55543210
Q ss_pred ----c-CCC-C-CC-cEEEEcCcCcC--ccCcEEEEEE
Q 018300 299 ----A-DPF-K-YC-DVVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 299 ----~-~pl-~-ga-Div~~S~hK~L--~Gp~GG~I~~ 326 (358)
+ ..+ + +- -+++.|++|++ +|.|-|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 226 EDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp GGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred cchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 0 011 1 22 27789999997 6999999865
No 185
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.50 E-value=5.9e-14 Score=139.40 Aligned_cols=159 Identities=18% Similarity=0.212 Sum_probs=105.8
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc----CCCE---EEecCCCCCcccccccccchhccccCCceEEE
Q 018300 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----PHDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (358)
Q Consensus 154 ~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~----pGD~---Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (358)
++++++++|.+. .++++|||+|+..++.++++ |||+ |++.. .|.+. .. ..+...|.. +
T Consensus 82 ~~~la~~~~~~~-----v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~-~~~~~--~~-----~~~~~~g~~--~ 146 (467)
T 1ax4_A 82 KDKAKELFNYDY-----IIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISN-FHFDT--TA-----AHVELNGCK--A 146 (467)
T ss_dssp HHHHHHHHCCCE-----EEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEES-SCCHH--HH-----HHHHHTTCE--E
T ss_pred HHHHHHHcCCCc-----EEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEec-cccch--hh-----HHHhccCCc--e
Confidence 456888888753 35667789999999999988 9998 88773 33111 00 122344543 2
Q ss_pred Eecee----cC-----CCCCCCHHHHHHHhhhc---CCeEEEEcCCCC---CCCC---CHHHHHHHHHHcCCEEEEeccc
Q 018300 227 MPYRL----DE-----STGLVDYDMLEKTAILF---RPKLIIAGASAY---PRDF---DYPRMRQIADAVGALLMMDMAH 288 (358)
Q Consensus 227 ~~~~~----~~-----~~~~iD~d~le~~i~~~---~~klIi~~~s~~---~~~~---dl~~I~~ia~e~g~~livD~Ah 288 (358)
+..+. +. .++.+|+++|++.++.. ++++|++..+++ |... ++++|+++|++||++|++|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~ 226 (467)
T 1ax4_A 147 INIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSAR 226 (467)
T ss_dssp EECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred ecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchh
Confidence 32221 11 14578999999998752 578888866553 3343 4688999999999999999998
Q ss_pred cc-ccc--------ccCCccCCC-----CCCcEEEEcCcCcCccCcEEEEEEe
Q 018300 289 IS-GLV--------AASVVADPF-----KYCDVVTTTTHKSLRGPRGGMIFFK 327 (358)
Q Consensus 289 ~~-Gl~--------~~g~~~~pl-----~gaDiv~~S~hK~L~Gp~GG~I~~~ 327 (358)
.. |.. ..+.....+ ..+|++++|+||+++.|.||+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~Gg~~~~~ 279 (467)
T 1ax4_A 227 FCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIR 279 (467)
T ss_dssp HHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSCEEEEES
T ss_pred hhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcceEEEeC
Confidence 76 322 112100011 2478999999999876668888887
No 186
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.49 E-value=6.4e-13 Score=130.80 Aligned_cols=209 Identities=15% Similarity=0.044 Sum_probs=124.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---c
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---K 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---~ 190 (358)
.+|.|++++...+..... ++..+| ..+. .++ .+++++++++.+.+ ..+++++|++|+..++.++. +
T Consensus 60 ~~p~v~~a~~~~~~~~~~--~~~~~~--~~~~---~~~-l~~~la~~~~~~~~---~v~~~~ggtea~~~ai~~~~~~~~ 128 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSH--VMFGGI--THAP---AIE-LCRKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYWQ 128 (429)
T ss_dssp SCHHHHHHHHHHHHHCSC--CCCSSE--ECHH---HHH-HHHHHHHHSCTTCC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--cccccc--CCHH---HHH-HHHHHHHhCCCCCC---EEEEeCCHHHHHHHHHHHHHHHhc
Confidence 589999999887754321 111112 1222 222 34568899987654 23556678889999987653 3
Q ss_pred ----CCCEEEecCCCCCccccccc-ccc-----hhccccCCceEEEEeceec---CCCCCCCHHHHHHHhhh--cCCeEE
Q 018300 191 ----PHDRIMGLDLPHGGHLSHGF-MTP-----KRRVSGTSIYFESMPYRLD---ESTGLVDYDMLEKTAIL--FRPKLI 255 (358)
Q Consensus 191 ----pGD~Vl~~~~~~ggh~s~~~-~~~-----~~~~~~~g~~~~~~~~~~~---~~~~~iD~d~le~~i~~--~~~klI 255 (358)
|||+|++.++.+.++..... ... ..........+..++++.. ...+.+|+++|++.+++ .++++|
T Consensus 129 ~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 208 (429)
T 1s0a_A 129 AKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAV 208 (429)
T ss_dssp HHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEE
T ss_pred ccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEE
Confidence 79999999876544311000 000 0000000011344444321 11236899999998864 356788
Q ss_pred EEcCC-CC--CCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCcc--CcEEE
Q 018300 256 IAGAS-AY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRGGM 323 (358)
Q Consensus 256 i~~~s-~~--~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~G--p~GG~ 323 (358)
++++. ++ |...+ +++|.++|+++|++|++|++|+ |+...+.. . ..++ ..|++++| |+|+| .+.|+
T Consensus 209 i~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~g~~g~~~~~~~~~~~~d~~t~s--K~l~~G~~~iG~ 285 (429)
T 1s0a_A 209 IIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIAT-GFGRTGKLFACEHAEIAPDILCLG--KALTGGTMTLSA 285 (429)
T ss_dssp EECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTSSSCCEE
T ss_pred EEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCcccchHHHhhhcCCCCCEEEec--ccccCCCccceE
Confidence 88765 43 54455 9999999999999999999997 33222211 1 1122 56887655 99876 46799
Q ss_pred EEEeCCCCchhHHHHHHhh
Q 018300 324 IFFKKDPVLGVELESAINN 342 (358)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~ 342 (358)
+++++ ++.+.+..
T Consensus 286 ~~~~~------~~~~~l~~ 298 (429)
T 1s0a_A 286 TLTTR------EVAETISN 298 (429)
T ss_dssp EEECH------HHHHHHHT
T ss_pred EEeCH------HHHHHhhc
Confidence 98876 56666654
No 187
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.49 E-value=3.6e-13 Score=129.50 Aligned_cols=193 Identities=17% Similarity=0.153 Sum_probs=121.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHH---hc-
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA---IL- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~a---ll- 189 (358)
.++.+++++...+... +.+..+| . .+...+ .++++++++|++ + ..+++++|++|+..++.+ +.
T Consensus 45 ~~~~v~~a~~~~~~~~---~~~~~~y-~-~~~~~~----l~~~la~~~g~~-~---~v~~~~g~t~a~~~~~~~~~~~~~ 111 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKL---LHVSNLY-E-NPWQEE----LAHKLVKHFWTE-G---KVFFANSGTESVEAAIKLARKYWR 111 (375)
T ss_dssp SCHHHHHHHHHHHHHC---SCCCTTB-C-CHHHHH----HHHHHHHTSSSC-E---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc---cccCccc-C-CHHHHH----HHHHHHhhcCCC-C---eEEEeCchHHHHHHHHHHHHHHhc
Confidence 6899999998876532 1222223 2 222223 456788999983 2 135566778899998865 35
Q ss_pred --cCC-CEEEecCCCCCcccccccccchhccccCCce-----EE-----EEeceecCCCCCCCHHHHHHHhhhcCCeEEE
Q 018300 190 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FE-----SMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (358)
Q Consensus 190 --~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~~-----~~~~~~~~~~~~iD~d~le~~i~~~~~klIi 256 (358)
+|| |+|++.++.+.++.... ....+.. +. ...++ .+|+++|++.++. ++++|+
T Consensus 112 ~~~~g~~~vl~~~~~y~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~ 177 (375)
T 2eh6_A 112 DKGKNKWKFISFENSFHGRTYGS-------LSATGQPKFHKGFEPLVPGFSYAK------LNDIDSVYKLLDE-ETAGII 177 (375)
T ss_dssp HTTCCCCEEEEEBTCCCCSSHHH-------HHHCBCGGGTTTTCSCCSSEEEEC------TTCHHHHHTTCCT-TEEEEE
T ss_pred cCCCCCCEEEEECCCcCCCchhh-------hhhcCCccccCCCCCCCCCceeCC------CchHHHHHHHhcC-CeEEEE
Confidence 789 99999987765532110 0111110 00 11111 2589999998764 788998
Q ss_pred EcCCCC--CCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc-CcEEEEEE
Q 018300 257 AGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMIFF 326 (358)
Q Consensus 257 ~~~s~~--~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G-p~GG~I~~ 326 (358)
+.++++ |...+ +++|.++|+++|+++++|++|+ |+...+... ..++ ..|++++| |+|.+ .+.|++++
T Consensus 178 ~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~ 254 (375)
T 2eh6_A 178 IEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQT-GIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPIGAILA 254 (375)
T ss_dssp ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEE
T ss_pred EeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCeEEEEE
Confidence 876554 44557 9999999999999999999998 332222111 1112 37888776 88865 45588888
Q ss_pred eCCCCchhHHHHHHhh
Q 018300 327 KKDPVLGVELESAINN 342 (358)
Q Consensus 327 ~~~~~~~~~~~~~i~~ 342 (358)
++ ++.+++..
T Consensus 255 ~~------~~~~~~~~ 264 (375)
T 2eh6_A 255 RE------EVAQSFTP 264 (375)
T ss_dssp EH------HHHTTCCT
T ss_pred cH------HHHhhhcC
Confidence 76 45555443
No 188
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.49 E-value=1.6e-13 Score=140.68 Aligned_cols=226 Identities=14% Similarity=0.110 Sum_probs=136.3
Q ss_pred ccccCh--HHHHHHHHHHHHhh--h-------cccccccC-CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHH
Q 018300 83 LGEADP--EVCEIITKEKERQF--K-------SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELE 150 (358)
Q Consensus 83 l~~~d~--~~~~~i~~e~~~~~--~-------~i~lias~-n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE 150 (358)
+..+++ ++++.+.+-+.... . .+++-..+ .+.++.+++++...+.. .+||.. .++.+ ..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~~~~~~~~~al~~~~~~---~~Y~~~--~g~~~---lr~ 145 (546)
T 2zy4_A 74 VGGLAKIDGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLGLDPAAFLHEMVDGILG---CNYPVP--PRMLN---ISE 145 (546)
T ss_dssp EEECCCSTTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHT---CSCCSS--SSCCH---HHH
T ss_pred hccCCccccchhHHHHHHHhcCCCCcchhHHhhhecccCCCCCCChHHHHHHHHhhhc---CCCCCC--cCCHH---HHH
Confidence 344444 66666666555432 1 22221122 24566777777665531 345542 12233 233
Q ss_pred HHHHHHHHHHcCCC--CCCCcceEEeCCCH-HHHHHHHHH-----hccCCCEEEecCCCCCcccccccccchhccccCCc
Q 018300 151 TLCQKRALAAFNLD--ENKWGVNVQPLSGS-PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 151 ~~~~~~la~lfg~~--~~~~~v~V~~~SGt-~A~~~a~~a-----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
+.++.++.+.++.. .... .+|++++|+ +|+..++.+ +++|||+|+++++.|.++.. ...+.+.
T Consensus 146 ~ia~~~~~~~~~~~~~~~~~-~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~~~ 216 (546)
T 2zy4_A 146 KIVRQYIIREMGADAIPSES-VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIE--------IPELAQY 216 (546)
T ss_dssp HHHHHHHHHHTTCTTSCGGG-EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHH--------HHHSTTS
T ss_pred HHHHHHHHHhccCCCCCCCc-ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHH--------HHHHcCC
Confidence 43444555555431 1001 246666665 588888877 57999999999887665432 1122332
Q ss_pred eEEEEeceecCCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHH--HHcCCEEEEeccccccccc
Q 018300 223 YFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIA--DAVGALLMMDMAHISGLVA 294 (358)
Q Consensus 223 ~~~~~~~~~~~~~-~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia--~e~g~~livD~Ah~~Gl~~ 294 (358)
..++++++.++++ ..+|+++|++.+. .++|+|++..++|| ...+ +++|.++| +++|++|++|++|. ++..
T Consensus 217 g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~-~~~~ 294 (546)
T 2zy4_A 217 ALEEVAINADPSLNWQYPDSELDKLKD-PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG-TFAD 294 (546)
T ss_dssp CCEEEEEECBGGGTTBCCHHHHGGGGS-TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTG-GGST
T ss_pred CcEEEEEecCcccCCCCCHHHHHHhhC-CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcch-hhcc
Confidence 3455666665443 4699999988764 46888877666665 4555 66788888 78999999999987 3332
Q ss_pred cCCccCCCC---CCcEEEEcCcCcC--ccCcEEEEEEeCC
Q 018300 295 ASVVADPFK---YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (358)
Q Consensus 295 ~g~~~~pl~---gaDiv~~S~hK~L--~Gp~GG~I~~~~~ 329 (358)
. .++.+. +.++++.|++|++ +|.|.|+++++++
T Consensus 295 ~--~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 295 D--FQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp T--CCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred c--CcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 1 111111 4568899999997 5778899999885
No 189
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.49 E-value=2e-13 Score=133.36 Aligned_cols=226 Identities=14% Similarity=0.133 Sum_probs=126.3
Q ss_pred cccccccChH-HHHHHHHHHHHhh-hcccccccC---CCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHH
Q 018300 80 DYSLGEADPE-VCEIITKEKERQF-KSLELIASE---NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (358)
Q Consensus 80 ~~~l~~~d~~-~~~~i~~e~~~~~-~~i~lias~---n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~ 154 (358)
..++...+|+ ++.+.++.+.... .-++|-.++ ...++.+.+++.... .....+|.. ..|.+ ++++.
T Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~-~~~~~~y~~---~~g~~---~lr~~-- 87 (409)
T 4eu1_A 17 QGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQAT-LGTNMDYAP---VTGIA---SFVEE-- 87 (409)
T ss_dssp ----------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCC-CCSCCCCCC---TTCCH---HHHHH--
T ss_pred hhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcC-ccccccCCC---CCCcH---HHHHH--
Confidence 3567777777 6777766555433 445664332 234566777766541 112223322 12322 45544
Q ss_pred HHHHHH-cCCC-----CCCCcceEEeCCCHHHHHHH---HHHhccCCCEEEecCCCCCcccccccccchhccccCCceEE
Q 018300 155 KRALAA-FNLD-----ENKWGVNVQPLSGSPANFEV---YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (358)
Q Consensus 155 ~~la~l-fg~~-----~~~~~v~V~~~SGt~A~~~a---~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (358)
++++ +|.+ ++++ ..+++.+|+.|+..+ +.+++++||+|++.++.|.++.. .+...|..
T Consensus 88 --ia~~~~~~~~~~~~~~~i-~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~-- 154 (409)
T 4eu1_A 88 --AQKLCFGPTCAALRDGRI-ASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES--------IFAKAGME-- 154 (409)
T ss_dssp --HHHHHHCSSCHHHHTTCE-EEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH--------HHHHTTCE--
T ss_pred --HHHHHcCCCchhhccCce-eeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCe--
Confidence 4443 3655 3211 012356677777664 44567899999999887766532 23456654
Q ss_pred EEeceec-CCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccCC
Q 018300 226 SMPYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV 297 (358)
Q Consensus 226 ~~~~~~~-~~~~~iD~d~le~~i~~~--~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~ 297 (358)
+++++++ ++++.+|++++++.++.. +++++++..+++| ...+ +++|.++|+++|+++++|++|. ++...+.
T Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~-~~~~~~~ 233 (409)
T 4eu1_A 155 LTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQ-GFATGQL 233 (409)
T ss_dssp EEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTTTSCH
T ss_pred EEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc-ccccCCc
Confidence 4444442 345689999999988642 3556666666655 4555 5669999999999999999976 3333321
Q ss_pred ----cc-CCC-C-CC-cEEEEcCcCcC--ccCcEEEE--EEeC
Q 018300 298 ----VA-DPF-K-YC-DVVTTTTHKSL--RGPRGGMI--FFKK 328 (358)
Q Consensus 298 ----~~-~pl-~-ga-Div~~S~hK~L--~Gp~GG~I--~~~~ 328 (358)
.+ ..+ + +. .+++.|++|++ +|.|.|++ +..+
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~ 276 (409)
T 4eu1_A 234 DYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTAS 276 (409)
T ss_dssp HHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSS
T ss_pred ccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCC
Confidence 00 011 2 22 37788999997 46677886 5444
No 190
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.48 E-value=1.1e-13 Score=134.86 Aligned_cols=170 Identities=12% Similarity=0.017 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHcCCC--CCCCcceEEeCCCHHHHHHHHHHhccCCC-----EEEec-CCCCCcccccccccchhcc-
Q 018300 147 DELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAILKPHD-----RIMGL-DLPHGGHLSHGFMTPKRRV- 217 (358)
Q Consensus 147 ~~lE~~~~~~la~lfg~~--~~~~~v~V~~~SGt~A~~~a~~all~pGD-----~Vl~~-~~~~ggh~s~~~~~~~~~~- 217 (358)
.++++.+.+++.+.+|.. ++ -.+++++|++|+..++.++++||| +|+++ ++.|.++..... ..
T Consensus 78 ~~lr~~ia~~~~~~~g~~~~~~---~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~-----~~~ 149 (417)
T 3g7q_A 78 TALLNALAVLLRETLGWDIEPQ---NIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGL-----EDD 149 (417)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGG---GEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC----------C
T ss_pred HHHHHHHHHHHHHHhCCCCCcc---cEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhcc-----chh
Confidence 356666666666666643 33 234445666799999999999988 89987 776655432110 00
Q ss_pred ccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCCCC---HHHHHHHHHHcCCEEEEeccccccc
Q 018300 218 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFD---YPRMRQIADAVGALLMMDMAHISGL 292 (358)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~--~~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl 292 (358)
...+....+.+++.+..+..+|+++++ +. .++++|++..+++ |...+ +++|.++|+++|+++++|++|....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~ 226 (417)
T 3g7q_A 150 LFVSARPNIELLPEGQFKYHVDFEHLH--IG-EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPF 226 (417)
T ss_dssp CEEECCCEEEEEGGGEEEEECCGGGCC--CC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTT
T ss_pred hhccccCcccccCCcccccccCHHHhc--cc-cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccc
Confidence 011111233333222112357888887 43 3678888766555 45666 8889999999999999999986422
Q ss_pred c---ccCCccCCCCCCcEEEEcCcCcC-ccCcEEEEEEeC
Q 018300 293 V---AASVVADPFKYCDVVTTTTHKSL-RGPRGGMIFFKK 328 (358)
Q Consensus 293 ~---~~g~~~~pl~gaDiv~~S~hK~L-~Gp~GG~I~~~~ 328 (358)
. ..+..+ ...+.++++.|++|++ +|.+.|+++.++
T Consensus 227 ~~~~~~~~~~-~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 265 (417)
T 3g7q_A 227 PGIIFSEARP-LWNPNIILCMSLSKLGLPGSRCGIIIAND 265 (417)
T ss_dssp TCCBCSCCCC-CCCTTEEEEEESGGGTCTTSCCEEEECCH
T ss_pred cccccccccc-CCCCCEEEEEechhccCCCcceEEEEeCH
Confidence 1 111111 1125678899999963 456779998876
No 191
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.48 E-value=3.6e-13 Score=131.45 Aligned_cols=222 Identities=12% Similarity=0.023 Sum_probs=131.6
Q ss_pred ccccccChHHHHHHHHHHHHh--hhcccccccC-------CCCcHHHHHHHhhhhhcc-cCCCCCCCcCCCCcHHHHHHH
Q 018300 81 YSLGEADPEVCEIITKEKERQ--FKSLELIASE-------NFTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELE 150 (358)
Q Consensus 81 ~~l~~~d~~~~~~i~~e~~~~--~~~i~lias~-------n~~s~~V~~al~~~l~~~-~~~G~pg~r~~~G~~~~~~lE 150 (358)
+++...++..+..+.+..... ...++|-.++ ..+++.|.+++...+... ...+|.. ..|. .+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~---~~g~---~~lr 80 (412)
T 1ajs_A 7 AEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLP---ILGL---AEFR 80 (412)
T ss_dssp TTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCC---TTCC---HHHH
T ss_pred hhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCC---CCCC---HHHH
Confidence 345555555444443333321 2345555333 245689999998765221 1223321 1122 2444
Q ss_pred HHHHHHHHHHc-CC-----CCCCCcceEE--eCCCHHHHHHHHH--HhccCC-----CEEEecCCCCCcccccccccchh
Q 018300 151 TLCQKRALAAF-NL-----DENKWGVNVQ--PLSGSPANFEVYT--AILKPH-----DRIMGLDLPHGGHLSHGFMTPKR 215 (358)
Q Consensus 151 ~~~~~~la~lf-g~-----~~~~~~v~V~--~~SGt~A~~~a~~--all~pG-----D~Vl~~~~~~ggh~s~~~~~~~~ 215 (358)
+. +++++ +. ++++ .++ +.+|+.|+..++. .+++|| |+|++.++.|.++..
T Consensus 81 ~~----la~~~~~~~~~~~~~~~---v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~-------- 145 (412)
T 1ajs_A 81 TC----ASRLALGDDSPALQEKR---VGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNG-------- 145 (412)
T ss_dssp HH----HHHHHHCTTCHHHHTTC---EEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHH--------
T ss_pred HH----HHHHHhcCCCCccCCCc---EEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHH--------
Confidence 44 55555 32 3321 233 5677789998853 557899 999999887766422
Q ss_pred ccccCCce-EEEEeceec-CCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEec
Q 018300 216 RVSGTSIY-FESMPYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 216 ~~~~~g~~-~~~~~~~~~-~~~~~iD~d~le~~i~~~--~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~ 286 (358)
.+...|.. +..++ ++ ++++.+|++++++.+... ++++|++..+++| ...+ +++|.++|+++|+++++|+
T Consensus 146 ~~~~~g~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De 223 (412)
T 1ajs_A 146 VFTTAGFKDIRSYR--YWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDS 223 (412)
T ss_dssp HHHHTTCSCEEEEE--CEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHcCCceeEEEe--eecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEc
Confidence 23345654 44444 42 135679999999988753 4567766666654 3443 6789999999999999999
Q ss_pred cccccccccC---Cc-c-CCCC-CCc--EEEEcCcCcCc--cCcEEEEEE
Q 018300 287 AHISGLVAAS---VV-A-DPFK-YCD--VVTTTTHKSLR--GPRGGMIFF 326 (358)
Q Consensus 287 Ah~~Gl~~~g---~~-~-~pl~-gaD--iv~~S~hK~L~--Gp~GG~I~~ 326 (358)
+|. ++...+ .. + ..+. ..| +++.|+||+++ |.|.|++++
T Consensus 224 ~y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 272 (412)
T 1ajs_A 224 AYQ-GFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTV 272 (412)
T ss_dssp SCT-TTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEE
T ss_pred ccc-cccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEE
Confidence 976 333322 11 1 1121 223 88999999874 556699988
No 192
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.48 E-value=8.8e-13 Score=129.71 Aligned_cols=159 Identities=12% Similarity=-0.035 Sum_probs=109.2
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCCH-HHH--HHHHHHhcc--C----------CCEEEecCCCCCcccccccccchhcc
Q 018300 153 CQKRALAAFNLDENKWGVNVQPLSGS-PAN--FEVYTAILK--P----------HDRIMGLDLPHGGHLSHGFMTPKRRV 217 (358)
Q Consensus 153 ~~~~la~lfg~~~~~~~v~V~~~SGt-~A~--~~a~~all~--p----------GD~Vl~~~~~~ggh~s~~~~~~~~~~ 217 (358)
.++.++++++++++ +|.+++|+ +++ ..++.++++ | ||+|++.++.|.++.. .+
T Consensus 83 lr~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~--------~~ 150 (427)
T 3ppl_A 83 IRQIWADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFS--------IT 150 (427)
T ss_dssp HHHHHHHHHTSCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------HH
T ss_pred HHHHHHHHhCCCcc----eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHH--------HH
Confidence 34557788898864 35556555 577 477888877 6 9999999886655422 23
Q ss_pred ccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc-CCCC--CCCCCHH---HHHHHH-HHcCCEEEEeccccc
Q 018300 218 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAY--PRDFDYP---RMRQIA-DAVGALLMMDMAHIS 290 (358)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~-~s~~--~~~~dl~---~I~~ia-~e~g~~livD~Ah~~ 290 (358)
...|. ++++++++++ + +|+++|++.++..++|+|++. .+++ |...+.+ +|.++| +++|+++++|++|..
T Consensus 151 ~~~g~--~~~~v~~~~~-g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~ 226 (427)
T 3ppl_A 151 ERFGF--EMISVPMNED-G-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAV 226 (427)
T ss_dssp HHTTC--EEEEEEEETT-E-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTT
T ss_pred HHcCC--EEEEeCCCCC-C-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcc
Confidence 45565 4555556643 3 999999998854578888875 3444 4567766 888888 999999999999873
Q ss_pred cccccCCccCC-----------CCCCcEEEEcCcCcC-ccCcEEEEEEeC
Q 018300 291 GLVAASVVADP-----------FKYCDVVTTTTHKSL-RGPRGGMIFFKK 328 (358)
Q Consensus 291 Gl~~~g~~~~p-----------l~gaDiv~~S~hK~L-~Gp~GG~I~~~~ 328 (358)
+.+.+..+.+ ..+.++++.|++|++ +|.|.|+++.++
T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~ 275 (427)
T 3ppl_A 227 -HTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA 275 (427)
T ss_dssp -CBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH
T ss_pred -cccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH
Confidence 2222211111 114568899999984 567889999876
No 193
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.48 E-value=2.8e-13 Score=131.17 Aligned_cols=190 Identities=15% Similarity=0.145 Sum_probs=118.3
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHc---C---CCCCCCcceEE--eCCCHHHHHHH
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF---N---LDENKWGVNVQ--PLSGSPANFEV 184 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lf---g---~~~~~~~v~V~--~~SGt~A~~~a 184 (358)
++++.|.+++...+.+....+|.. ..|. .++++. +++++ + +++++ + ++ +.+|++|+..+
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~lr~~----la~~~~~~~~~~~~~~~--v-~~~~~~g~~~a~~~~ 110 (396)
T 2q7w_A 44 PVLTSVKKAEQYLLENETTKNYLG---IDGI---PEFGRC----TQELLFGKGSALINDKR--A-RTAQTPGGTGALRVA 110 (396)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCC---TTCC---HHHHHH----HHHHHHCTTCHHHHTTC--E-EEEEESHHHHHHHHH
T ss_pred cCcHHHHHHHHhhcCcccccCCCC---CCCC---HHHHHH----HHHHHhcCCCCcccccc--E-EEEecccchhhHHHH
Confidence 467999999987654322223321 1122 244444 44444 2 12321 2 22 66777899998
Q ss_pred HHHh--ccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-CCCCCCHHHHHHHhhhc--CCeEEEEcC
Q 018300 185 YTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF--RPKLIIAGA 259 (358)
Q Consensus 185 ~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~iD~d~le~~i~~~--~~klIi~~~ 259 (358)
+.++ +.|||+|++.++.|.++.. .+...|..+ +.+++++ +++.+|++++++.+... +++++++..
T Consensus 111 ~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~ 180 (396)
T 2q7w_A 111 ADFLAKNTSVKRVWVSNPSWPNHKS--------VFNSAGLEV--REYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGC 180 (396)
T ss_dssp HHHHHHHSCCCEEEEEESCCTHHHH--------HHHHTTCEE--EEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECS
T ss_pred HHHHHHhCCCCEEEEcCCCchhHHH--------HHHHcCCce--EEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCC
Confidence 8765 5799999999887665422 233456543 4444432 35678999999988653 356677666
Q ss_pred CCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccC--Cc-c-CCCC--C-CcEEEEcCcCcCc--cCcEEEEE
Q 018300 260 SAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAAS--VV-A-DPFK--Y-CDVVTTTTHKSLR--GPRGGMIF 325 (358)
Q Consensus 260 s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g--~~-~-~pl~--g-aDiv~~S~hK~L~--Gp~GG~I~ 325 (358)
+++| ...+ +++|.++|+++|+++++|++|.. +..++ .. + ..++ + .++++.|+||+++ |.|.|+++
T Consensus 181 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~ 259 (396)
T 2q7w_A 181 CHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQG-FARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACT 259 (396)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTT-SSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEeccccc-ccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEE
Confidence 6654 4444 67899999999999999999873 22221 11 1 1122 2 3477999999974 66679988
Q ss_pred E
Q 018300 326 F 326 (358)
Q Consensus 326 ~ 326 (358)
.
T Consensus 260 ~ 260 (396)
T 2q7w_A 260 L 260 (396)
T ss_dssp E
T ss_pred E
Confidence 6
No 194
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.48 E-value=1.8e-13 Score=135.61 Aligned_cols=160 Identities=14% Similarity=0.074 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCC-HHHHHHHHHHh-ccCCCEEEecCCCCCcccccccccchhccccCCceEE
Q 018300 148 ELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~v~V~~~SG-t~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (358)
++++.+++++++++|++.+ ++.+++| |.++.+++.++ +++||+|+++++.|.++... + .......|..
T Consensus 108 ~~~~~~~~~la~~~g~~~~----~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~-~---~~~a~~~G~~-- 177 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIA----NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAV-L---RAYLEAVGAK-- 177 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEE----CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHH-H---HHHHHHTTCE--
T ss_pred HHHHHHHHHHHHHhCCCcc----ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHH-H---HHHHHHCCCE--
Confidence 4555678899999999863 3334444 43445555553 68999999998766554211 0 0011235654
Q ss_pred EEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCCCCCHHHHHHHHHHcCCEEEEecc-ccccccccCCccCCCC
Q 018300 226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMA-HISGLVAASVVADPFK 303 (358)
Q Consensus 226 ~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~-~~~~~dl~~I~~ia~e~g~~livD~A-h~~Gl~~~g~~~~pl~ 303 (358)
++.++. +++.+|+++ +.. ++++|++..++ +|...|+++|.++|+++|+++++|.. ++.|.. ..+-+
T Consensus 178 v~~v~~--~~~~~d~~~----i~~-~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~-----~~~~~ 245 (438)
T 1wyu_A 178 LLTLPL--EGGRTPLPE----VGE-EVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVL-----KPPGA 245 (438)
T ss_dssp EEEECC--BTTBCCCCC----CCT-TEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTB-----CCHHH
T ss_pred EEEEcC--cCCccCHHH----hCC-CeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCc-----CCCcc
Confidence 444444 246778776 443 68888776653 56788999999999999999998865 655542 12222
Q ss_pred -CCcEEEEcCcC-----cCccCcEEEEEEeCC
Q 018300 304 -YCDVVTTTTHK-----SLRGPRGGMIFFKKD 329 (358)
Q Consensus 304 -gaDiv~~S~hK-----~L~Gp~GG~I~~~~~ 329 (358)
++|++++|+|| +++||++|+++++++
T Consensus 246 ~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~ 277 (438)
T 1wyu_A 246 YGADIAVGDGQSLGLPMGFGGPHFGFLATKKA 277 (438)
T ss_dssp HTCSEEEEECTTTTCCCGGGCSCCEEEEECGG
T ss_pred CCCCEEEECCcccCCCccCCCCCeeEEEEcHH
Confidence 79999999887 688997799999874
No 195
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.47 E-value=5.9e-13 Score=129.83 Aligned_cols=220 Identities=13% Similarity=0.133 Sum_probs=126.1
Q ss_pred cccccccCh-HHHHHHHHHHHHh------hhcccccccCC--CCcHHHHHHHhhhhhccc----CCCCCCCcCCCCcHHH
Q 018300 80 DYSLGEADP-EVCEIITKEKERQ------FKSLELIASEN--FTSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYI 146 (358)
Q Consensus 80 ~~~l~~~d~-~~~~~i~~e~~~~------~~~i~lias~n--~~s~~V~~al~~~l~~~~----~~G~pg~r~~~G~~~~ 146 (358)
+.++.++++ +.|+.+.+..... ..-+++-..++ .+++.|++++...+.... ..+|+. ..|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~---~~g~--- 77 (400)
T 3asa_A 4 NPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGP---DFGL--- 77 (400)
T ss_dssp CHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCC---TTCC---
T ss_pred chhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCC---CCCC---
Confidence 344555544 4444443333321 13345544433 468899999987765321 112321 1122
Q ss_pred HHHHHHHHHHHHHH--cC-CCCCCCcceEEeCCC-HHHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCc
Q 018300 147 DELETLCQKRALAA--FN-LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 147 ~~lE~~~~~~la~l--fg-~~~~~~~v~V~~~SG-t~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
.+++ +.++++ +| ++++ +|.+++| ++++..+ ..+++|||+|++.++.|.++.. .+...|.
T Consensus 78 ~~lr----~~la~~l~~g~~~~~----~v~~~~G~~~al~~~-~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~ 140 (400)
T 3asa_A 78 PALR----QKLSEDFYRGFVDAK----EIFISDGAKVDLFRL-LSFFGPNQTVAIQDPSYPAYLD--------IARLTGA 140 (400)
T ss_dssp HHHH----HHHHHTTSTTSSCGG----GEEEESCHHHHHHHH-HHHHCSSCEEEEEESCCHHHHH--------HHHHTTC
T ss_pred HHHH----HHHHHHHHcCCCCHH----HEEEccChHHHHHHH-HHHcCCCCEEEECCCCcHHHHH--------HHHHcCC
Confidence 2344 446666 57 5543 3555555 5577765 4567899999998876655421 2234565
Q ss_pred eEEEEeceecCCCC-CCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCC---HHHHHHHHHHcCCEEEEeccccccccccC
Q 018300 223 YFESMPYRLDESTG-LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAAS 296 (358)
Q Consensus 223 ~~~~~~~~~~~~~~-~iD~d~le~~i~~~~~klIi~~~s~~~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g 296 (358)
. .+.+++++++++ ..|++ + + .++++|++..+++| ...+ +++|.++|+++|+++++|++|. ++...+
T Consensus 141 ~-~~~~~~~~~~~~~~~~l~---~-~--~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~ 212 (400)
T 3asa_A 141 K-EIIALPCLQENAFFPEFP---E-D--THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYS-TFISDP 212 (400)
T ss_dssp S-EEEEEECCGGGTTCCCCC---T-T--CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG-GGCCCT
T ss_pred c-ceEecccchhcCcccChh---h-c--cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhh-hhhcCC
Confidence 3 033444443222 33432 1 1 36888887656654 4555 6678899999999999999987 233333
Q ss_pred CccCCC---CC---CcEEEEcCcCcC--ccCcEEEEEEeCCC
Q 018300 297 VVADPF---KY---CDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (358)
Q Consensus 297 ~~~~pl---~g---aDiv~~S~hK~L--~Gp~GG~I~~~~~~ 330 (358)
..+.++ ++ .++++.|++|++ +|.|.|+++++++.
T Consensus 213 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~ 254 (400)
T 3asa_A 213 SLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQEL 254 (400)
T ss_dssp TSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTC
T ss_pred CCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhh
Confidence 222122 21 348899999997 56677999988763
No 196
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.46 E-value=6e-13 Score=132.30 Aligned_cols=185 Identities=14% Similarity=0.066 Sum_probs=116.3
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
.+|.|.+++.+.+... . +....| ..+...+ .++++++++|.+. .++++||++|+..++.++.
T Consensus 93 ~~p~v~~Ai~~~~~~~-~--~~~~~~--~~~~~~~----l~~~la~~~g~~~-----v~~~~sGseA~~~al~~~~~~~~ 158 (439)
T 2oat_A 93 CHPKIVNALKSQVDKL-T--LTSRAF--YNNVLGE----YEEYITKLFNYHK-----VLPMNTGVEAGETACKLARKWGY 158 (439)
T ss_dssp TCHHHHHHHHHHHTTC-S--CCCTTS--EESSHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-C--cccCcc--CCHHHHH----HHHHHHHhcCCCE-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 6899999998876542 1 111112 1222233 3456778888543 3567789999999998764
Q ss_pred -----cCC-CEEEecCCCCCcccccccccchhccccCCc----------eEEEEeceecCCCCCCCHHHHHHHhhhcCCe
Q 018300 190 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (358)
Q Consensus 190 -----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~----------~~~~~~~~~~~~~~~iD~d~le~~i~~~~~k 253 (358)
+|| |+|++.++.+.|.... .+...+. ..++..++ ..|+++|++.++..+++
T Consensus 159 ~~~g~~~g~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~p~~~~v~~~~------~~d~~~le~~l~~~~~~ 225 (439)
T 2oat_A 159 TVKGIQKYKAKIVFAAGNFWGRTLS-------AISSSTDPTSYDGFGPFMPGFDIIP------YNDLPALERALQDPNVA 225 (439)
T ss_dssp HTTCCCTTCCEEEEETTCCCCSSHH-------HHTTCCCHHHHTTSCSCCTTEEEEC------SSCHHHHHHHTTSTTEE
T ss_pred hccCCCCCCCeEEEEcCCCCCCCHh-------HhhcCCChhcccCCCCCCCCeEEeC------CCCHHHHHHHhCCCCEE
Confidence 467 8999988655443210 1112220 00112222 13899999988534678
Q ss_pred EEEEcCCC--CCCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc--CcEE
Q 018300 254 LIIAGASA--YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG--PRGG 322 (358)
Q Consensus 254 lIi~~~s~--~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G--p~GG 322 (358)
+|++++.+ .|... ++++|.++|+++|++||+|++|. |+...|... ..++ ..|++ |++|+|+| .++|
T Consensus 226 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~G~~~~G 302 (439)
T 2oat_A 226 AFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT-GLARTGRWLAVDYENVRPDIV--LLGKALSGGLYPVS 302 (439)
T ss_dssp EEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCE
T ss_pred EEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCCcchhHHHhCCCCcEE--EecccccCCCCCeE
Confidence 88887543 34444 79999999999999999999994 654333211 1122 46877 55699965 4789
Q ss_pred EEEEeC
Q 018300 323 MIFFKK 328 (358)
Q Consensus 323 ~I~~~~ 328 (358)
++++++
T Consensus 303 ~v~~~~ 308 (439)
T 2oat_A 303 AVLCDD 308 (439)
T ss_dssp EEEECH
T ss_pred EEEECH
Confidence 999986
No 197
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.46 E-value=4.2e-13 Score=130.00 Aligned_cols=190 Identities=16% Similarity=0.191 Sum_probs=117.9
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHc-CC--CCCCCcceEE--eCCCHHHHHHHHHH
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NL--DENKWGVNVQ--PLSGSPANFEVYTA 187 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lf-g~--~~~~~~v~V~--~~SGt~A~~~a~~a 187 (358)
++++.|.+++...+......+|+. ..|. .++++. +++++ +. ++++ .++ +.+|+.|+..++.+
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~lr~~----la~~~~~~~~~~~~---v~~~~~~g~~~a~~~~~~~ 110 (394)
T 2ay1_A 44 PIMRAVHAAEQRMLETETTKTYAG---LSGE---PEFQKA----MGELILGDGLKSET---TATLATVGGTGALRQALEL 110 (394)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCC---SSCC---HHHHHH----HHHHHHGGGCCGGG---EEEEEEEHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHhcCCcccCCCCC---CCCc---HHHHHH----HHHHHhCCCCCccc---EEEEecCCchhHHHHHHHH
Confidence 457999999987654322223432 1222 234444 44444 44 3331 233 56778899999877
Q ss_pred hc--cCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecC-CCCCCCHHHHHHHhhhc--CCeEEEEcCCCC
Q 018300 188 IL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF--RPKLIIAGASAY 262 (358)
Q Consensus 188 ll--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~iD~d~le~~i~~~--~~klIi~~~s~~ 262 (358)
+. .|||+|++.++.|.++.. .+...|..+..+ ++++ +++.+|++++++.++.. +++++++..+++
T Consensus 111 ~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~--~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~n 180 (394)
T 2ay1_A 111 ARMANPDLRVFVSDPTWPNHVS--------IMNFMGLPVQTY--RYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHN 180 (394)
T ss_dssp HHHHCTTCCEEEEESCCHHHHH--------HHHHHTCCEEEE--ECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCT
T ss_pred HHhcCCCCEEEEcCCCChhHHH--------HHHHcCCceEEE--ecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 64 499999998876655421 223445544434 4432 34678999999988653 245666666665
Q ss_pred C--CCCC---HHHHHHHHHHcCCEEEEeccccccccccC---Ccc-CCCC--CC-cEEEEcCcCcC--ccCcEEEEEE
Q 018300 263 P--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAAS---VVA-DPFK--YC-DVVTTTTHKSL--RGPRGGMIFF 326 (358)
Q Consensus 263 ~--~~~d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g---~~~-~pl~--ga-Div~~S~hK~L--~Gp~GG~I~~ 326 (358)
| ...+ +++|.++|+++|+++++|++|+.. ..++ ..+ ..+. +. .+++.|+||++ +|.|.|++++
T Consensus 181 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 257 (394)
T 2ay1_A 181 PTGANLTLDQWAEIASILEKTGALPLIDLAYQGF-GDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLA 257 (394)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTS-SSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEecCcccc-ccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEE
Confidence 4 4454 668899999999999999998732 2211 001 1122 32 36788999997 4667799987
No 198
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.46 E-value=9.9e-13 Score=130.39 Aligned_cols=185 Identities=14% Similarity=0.097 Sum_probs=113.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
.+|.|.+++...+... . +.. +.+ ..+...+ .++++++++|.+. .++++||++|+..++.++.
T Consensus 82 ~~p~v~~ai~~~~~~~-~--~~~-~~~-~~~~~~~----l~~~la~~~g~~~-----v~~~~sGseA~~~al~~a~~~~~ 147 (433)
T 1z7d_A 82 CHPNILNAMINQAKNL-T--ICS-RAF-FSVPLGI----CERYLTNLLGYDK-----VLMMNTGAEANETAYKLCRKWGY 147 (433)
T ss_dssp TCHHHHHHHHHHHTTC-S--CCC-TTS-EEHHHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhC-C--Ccc-CCc-CCHHHHH----HHHHHHhhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 6899999998876432 1 111 112 2232233 4456788888543 3567789999999988753
Q ss_pred -----cCC-CEEEecCCCCCcccccccccchhccccCCce----------EEEEeceecCCCCCCCHHHHHHHhhhcCCe
Q 018300 190 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (358)
Q Consensus 190 -----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~iD~d~le~~i~~~~~k 253 (358)
+|| |+|++.++.+.|.... .+...+.. .++..++ ..|+++|++.++..+++
T Consensus 148 ~~~g~~~gr~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~p~~~~v~~~~------~~d~~~le~~l~~~~~~ 214 (433)
T 1z7d_A 148 EVKKIPENMAKIVVCKNNFSGRTLG-------CISASTTKKCTSNFGPFAPQFSKVP------YDDLEALEEELKDPNVC 214 (433)
T ss_dssp HTSCCCTTCCEEEEETTC---------------------------------CEEEEC------TTCHHHHHHHHTSTTEE
T ss_pred hccCCCCCCCeEEEEeCCcCCcchh-------hhcccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCCEE
Confidence 478 9999988765443211 11122210 0112211 23899999988434678
Q ss_pred EEEEcCCC--CCCCC----CHHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCcc--CcEE
Q 018300 254 LIIAGASA--YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRGG 322 (358)
Q Consensus 254 lIi~~~s~--~~~~~----dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~G--p~GG 322 (358)
+|++++.+ .|... ++++|.++|+++|++||+|++|+ |+...|.. . ..++ ..|++ |++|+|+| .++|
T Consensus 215 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~~~G 291 (433)
T 1z7d_A 215 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVI--LLGKALSGGHYPIS 291 (433)
T ss_dssp EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCE
T ss_pred EEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEE--EECccccCCCCCeE
Confidence 88887543 34433 79999999999999999999996 65333321 1 1122 56887 45699864 4789
Q ss_pred EEEEeC
Q 018300 323 MIFFKK 328 (358)
Q Consensus 323 ~I~~~~ 328 (358)
++++++
T Consensus 292 ~v~~~~ 297 (433)
T 1z7d_A 292 AVLAND 297 (433)
T ss_dssp EEEECH
T ss_pred EEEECH
Confidence 999886
No 199
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.46 E-value=7.6e-13 Score=125.84 Aligned_cols=194 Identities=14% Similarity=0.072 Sum_probs=125.4
Q ss_pred ccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC---CCCCCCcceEEeCC-CH
Q 018300 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLS-GS 178 (358)
Q Consensus 105 i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg---~~~~~~~v~V~~~S-Gt 178 (358)
++|-..++ .+++.|++++...+......+|+.. +. .+ .++.++++++ ++++ +|.+++ |+
T Consensus 22 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~~---~~----lr~~la~~~~~~~~~~~----~v~~~~G~~ 86 (335)
T 1uu1_A 22 TYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS----PD---EE----LIEKILSYLDTDFLSKN----NVSVGNGAD 86 (335)
T ss_dssp EEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS----SC---HH----HHHHHHHHHTCSSCCGG----GEEEESSHH
T ss_pred eECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----ch---HH----HHHHHHHHcCCCCCCHH----HEEEcCChH
Confidence 45544444 3589999999877632222334321 11 23 3455788888 6653 344454 56
Q ss_pred HHHHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
+|+..++.++ ||+|++. +.|.++.. .+...|. +++.+++++ ++.+|++++ .++++|++.
T Consensus 87 ~al~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l------~~~~~v~l~ 145 (335)
T 1uu1_A 87 EIIYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGA--KFLEVPLTK-DLRIPEVNV------GEGDVVFIP 145 (335)
T ss_dssp HHHHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTC--EEEECCCCT-TSCCCCCCC------CTTEEEEEE
T ss_pred HHHHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCC--eEEEeccCC-CCCCCHHHc------CCCCEEEEe
Confidence 7999988887 9999998 86655421 2234455 445555653 346787766 368888865
Q ss_pred CCCC--CCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC--CCcEEEEcCcCcC--ccCcEEEEEEeCCCCc
Q 018300 259 ASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (358)
Q Consensus 259 ~s~~--~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~ 332 (358)
.+++ |...+.+++.++++.+| ++++|++|+. +...... ..++ +.+++++|++|++ +|.|.|++++++
T Consensus 146 ~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~-~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~---- 218 (335)
T 1uu1_A 146 NPNNPTGHVFEREEIERILKTGA-FVALDEAYYE-FHGESYV-DFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE---- 218 (335)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHH-HHCCCCG-GGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH----
T ss_pred CCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchh-hcchhHH-HHhhhCCCEEEEecchhhcCCcccCeEEEEeCH----
Confidence 5554 56889999999999999 9999999873 2221111 1122 4678999999997 466779999965
Q ss_pred hhHHHHHHhhc
Q 018300 333 GVELESAINNA 343 (358)
Q Consensus 333 ~~~~~~~i~~~ 343 (358)
++.+++...
T Consensus 219 --~~~~~l~~~ 227 (335)
T 1uu1_A 219 --KFIDAYNRV 227 (335)
T ss_dssp --HHHHHHHHH
T ss_pred --HHHHHHHHh
Confidence 566666554
No 200
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.45 E-value=1e-12 Score=125.41 Aligned_cols=197 Identities=11% Similarity=0.063 Sum_probs=127.9
Q ss_pred hcccccccCC--CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHH
Q 018300 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (358)
Q Consensus 103 ~~i~lias~n--~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A 180 (358)
.-+++-..++ .+++.|++++...+... .+|+... + .+ .++++++++|+++++ .+++++|++|
T Consensus 16 ~~id~~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~~---~----~~----lr~~la~~~~~~~~~---i~~t~g~~~a 79 (350)
T 3fkd_A 16 EIVNFSTTVWTDGDKDHLEKHLVENLNCI--RHYPEPD---A----GT----LRQMLAKRNSVDNNA---ILVTNGPTAA 79 (350)
T ss_dssp CCEECSCCSCCCSCCHHHHHHHHHTGGGG--GSCCCTT---C----HH----HHHHHHHHTTCCGGG---EEEESHHHHH
T ss_pred cEEEccCCCCCCCCCHHHHHHHHHhHhHH--hcCCCCc---H----HH----HHHHHHHHhCcCHHH---EEEcCCHHHH
Confidence 4455544444 35899999998776322 2454311 1 12 455688899987642 2444556679
Q ss_pred HHHHHHHhccCCCEEEecCCCCCcccccccccchhccccCCceEEEEecee-cCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 018300 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIAGA 259 (358)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~iD~d~le~~i~~~~~klIi~~~ 259 (358)
+..++.++. ||+|++.++.|.++. ..+...|. +++++++ ++ .+.+++ .++|+|++..
T Consensus 80 l~~~~~~l~--gd~Vi~~~p~~~~~~--------~~~~~~g~--~~~~v~~~~~-~~~~~~---------~~~~~v~i~~ 137 (350)
T 3fkd_A 80 FYQIAQAFR--GSRSLIAIPSFAEYE--------DACRMYEH--EVCFYPSNED-IGEADF---------SNMDFCWLCN 137 (350)
T ss_dssp HHHHHHHTT--TCEEEEEESCCHHHH--------HHHHHTTC--EEEEEETTSC-GGGSCC---------TTCSEEEEES
T ss_pred HHHHHHHHC--CCEEEEeCCCcHHHH--------HHHHHcCC--eEEEEecCCc-cccCcc---------CCCCEEEEeC
Confidence 999998887 999999887665432 12345565 4455555 42 223333 3688887766
Q ss_pred CCC--CCCCCHHHHHHHHHHcC-CEEEEeccccccccccCCcc-CCCC--CCcEEEEcCcCcC--ccCcEEEEEEeCCCC
Q 018300 260 SAY--PRDFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVA-DPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (358)
Q Consensus 260 s~~--~~~~dl~~I~~ia~e~g-~~livD~Ah~~Gl~~~g~~~-~pl~--gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~ 331 (358)
+++ |...+.+++.++++.++ .++++|++|+. +...+... ..++ +.++++.|++|++ +|.+.|++++++
T Consensus 138 p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--- 213 (350)
T 3fkd_A 138 PNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVS-FTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--- 213 (350)
T ss_dssp SCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTT-SCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH---
T ss_pred CCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhh-hccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH---
Confidence 554 56889999999999886 79999999863 33332211 1122 4558899999986 467789999855
Q ss_pred chhHHHHHHhhcc
Q 018300 332 LGVELESAINNAV 344 (358)
Q Consensus 332 ~~~~~~~~i~~~~ 344 (358)
++.+++....
T Consensus 214 ---~~~~~~~~~~ 223 (350)
T 3fkd_A 214 ---DFMKRVAAFS 223 (350)
T ss_dssp ---HHHHHHHTTC
T ss_pred ---HHHHHHHHhC
Confidence 6777776643
No 201
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.42 E-value=1.9e-12 Score=126.74 Aligned_cols=195 Identities=15% Similarity=-0.003 Sum_probs=117.6
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHH---Hhc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AIL 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~---all 189 (358)
+.++.|++++...+... . +....|+ ..+.. ...++.++++++.+..+ ..+++++|++|+..++. ++.
T Consensus 57 ~~~~~v~~a~~~~~~~~-~--~~~~~~~-~~~~~----~~l~~~la~~~~~~~~~--~v~~~~g~~~a~~~~~~~a~~~~ 126 (426)
T 1sff_A 57 HLHPKVVAAVEAQLKKL-S--HTCFQVL-AYEPY----LELCEIMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAAT 126 (426)
T ss_dssp BTCHHHHHHHHHHTTTC-S--CCCTTTE-ECHHH----HHHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhC-C--Ccccccc-CCHHH----HHHHHHHHHhCCccccc--EEEEeCchHHHHHHHHHHHHHhh
Confidence 36899999998776432 1 1111122 12222 22456688888322211 23455677889999987 667
Q ss_pred cCCCEEEecCCCCCcccccccccchhccccCCc-------------eEEEEeceecC--CCCCCCHHHHHHHhhh----c
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDE--STGLVDYDMLEKTAIL----F 250 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~~iD~d~le~~i~~----~ 250 (358)
++| +|++.++.+.+.... .+...+. .+..++++.+. .++.+|+++|++.++. .
T Consensus 127 ~~~-~vi~~~p~y~~~~~~-------~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 198 (426)
T 1sff_A 127 KRS-GTIAFSGAYHGRTHY-------TLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPE 198 (426)
T ss_dssp TCC-EEEEETTCCCCSSHH-------HHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGG
T ss_pred CCC-eEEEECCCcCCCchH-------hhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCC
Confidence 777 788877765443210 1111121 13334433211 1234789999998863 3
Q ss_pred CCeEEEEcC--CCCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc-Cc
Q 018300 251 RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PR 320 (358)
Q Consensus 251 ~~klIi~~~--s~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G-p~ 320 (358)
++++|++++ ++.|...+ +++|.++|+++|++|++|++|+ |+...+... ...+ ..|++ |++|+|++ .+
T Consensus 199 ~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~--s~sK~~~~Glr 275 (426)
T 1sff_A 199 DIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLT--TFAKSIAGGFP 275 (426)
T ss_dssp GEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEE--EECGGGGTSSC
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEE--EEcccccCCCc
Confidence 577888854 34565666 9999999999999999999998 654333211 1122 46776 55699853 34
Q ss_pred EEEEEEeC
Q 018300 321 GGMIFFKK 328 (358)
Q Consensus 321 GG~I~~~~ 328 (358)
.|++++++
T Consensus 276 iG~~~~~~ 283 (426)
T 1sff_A 276 LAGVTGRA 283 (426)
T ss_dssp CEEEEEEH
T ss_pred eEEEEEcH
Confidence 49999987
No 202
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.41 E-value=3e-12 Score=126.85 Aligned_cols=200 Identities=18% Similarity=0.073 Sum_probs=123.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcC-CCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc--
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~-~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~-- 190 (358)
.+|.|++++...+.... ..++ .+..+.. ...+++++++++.+.+ ..++++||++|+..++.++..
T Consensus 67 ~~~~v~~a~~~~~~~~~-----~~~~~~~~~~~~----~~l~~~la~~~~~~~~---~v~~~~ggsea~~~al~~~~~~~ 134 (449)
T 3a8u_X 67 TRKEIQEAVAKQLSTLD-----YSPGFQYGHPLS----FQLAEKITDLTPGNLN---HVFFTDSGSECALTAVKMVRAYW 134 (449)
T ss_dssp SCHHHHHHHHHHTTTCS-----CCCSSSCCCHHH----HHHHHHHHTTSSTTEE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC-----CccccccCCHHH----HHHHHHHHHhCCCCCC---EEEEcCcHHHHHHHHHHHHHHHH
Confidence 37999999987765321 1111 1122322 2345668888876553 235567888999999987753
Q ss_pred ------CCCEEEecCCCCCcccccccccchhccccCC------------ceEEEEeceecCCC--CCCC--------HHH
Q 018300 191 ------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDEST--GLVD--------YDM 242 (358)
Q Consensus 191 ------pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~~~~~~~~~~--~~iD--------~d~ 242 (358)
+||+|++.++.+.+.... .+...+ ..+..++++..... ..+| +++
T Consensus 135 ~~~g~~~~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~ 207 (449)
T 3a8u_X 135 RLKGQATKTKMIGRARGYHGVNIA-------GTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADE 207 (449)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHH-------HHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCChh-------hhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHH
Confidence 789999988766543210 111111 11334443221000 1246 999
Q ss_pred HHHHhhh---cCCeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEecccc-ccccccCCc-c-CCCC-CCcEEE
Q 018300 243 LEKTAIL---FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVV-A-DPFK-YCDVVT 309 (358)
Q Consensus 243 le~~i~~---~~~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~-~Gl~~~g~~-~-~pl~-gaDiv~ 309 (358)
|++.++. .++++|++++.+ .|...+ +++|.++|+++|++||+|++|+ +|.. |.. . ..++ ..|+++
T Consensus 208 le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~--g~~~~~~~~~~~~di~s 285 (449)
T 3a8u_X 208 LLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRT--GSMFGADSFGVTPDLMC 285 (449)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT--SSSSHHHHHTCCCSEEE
T ss_pred HHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc--CcchhhhhcCCCCCEEE
Confidence 9998864 256788887643 455677 9999999999999999999995 4422 211 1 1112 468774
Q ss_pred EcCcCcCcc--CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 310 TTTHKSLRG--PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 310 ~S~hK~L~G--p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
++|+|+| .+.|++++++ ++.+.+..
T Consensus 286 --~sK~l~~G~~~~G~~~~~~------~~~~~l~~ 312 (449)
T 3a8u_X 286 --IAKQVTNGAIPMGAVIAST------EIYQTFMN 312 (449)
T ss_dssp --ECGGGGTTSSCCEEEEEEH------HHHHHHHT
T ss_pred --EcccccCCCCceEEEEECH------HHHHHhhc
Confidence 4599965 5678888876 56676655
No 203
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.41 E-value=1.3e-12 Score=126.95 Aligned_cols=185 Identities=15% Similarity=0.087 Sum_probs=116.9
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
.+|.|++++.+.+.. +. +.+. .| ..+.. +..++++++++|.+. .++++||++|+..++.++..
T Consensus 57 ~~~~v~~a~~~~~~~-~~--~~~~-~~-~~~~~----~~l~~~la~~~g~~~-----v~~~~gg~~a~~~al~~~~~~~~ 122 (397)
T 2ord_A 57 SHPRLVEAIKDQAEK-LI--HCSN-LF-WNRPQ----MELAELLSKNTFGGK-----VFFANTGTEANEAAIKIARKYGK 122 (397)
T ss_dssp TCHHHHHHHHHHHHH-CS--CCCT-TS-EEHHH----HHHHHHHHHTTTSCE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cc--cCcc-cc-CCHHH----HHHHHHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 589999999887654 22 1111 12 23322 334566888888532 35667889999999988753
Q ss_pred ---C-CCEEEecCCCCCcccccccccchhccccCCce-----E-----EEEeceecCCCCCCCHHHHHHHhhhcCCeEEE
Q 018300 191 ---P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (358)
Q Consensus 191 ---p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi 256 (358)
+ +|+|++.++.+.+.... .+...|.. + .+..++. .|+++|++.++. ++++|+
T Consensus 123 ~~~~~~~~vi~~~~~yh~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~l~~-~~~~v~ 188 (397)
T 2ord_A 123 KKSEKKYRILSAHNSFHGRTLG-------SLTATGQPKYQKPFEPLVPGFEYFEF------NNVEDLRRKMSE-DVCAVF 188 (397)
T ss_dssp HHCTTCCEEEEEBTCCCCSSHH-------HHHHSBCHHHHGGGCSCCTTEEEECT------TCHHHHHHHCCT-TEEEEE
T ss_pred cCCCCCceEEEEcCCcCCCchh-------hhhccCChhhccccCCCCCCeeEecC------CCHHHHHHHhhc-CeEEEE
Confidence 5 47888877654332110 11222221 0 0222221 389999998864 789998
Q ss_pred EcCCCCC--C----CCCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCcEEEEEE
Q 018300 257 AGASAYP--R----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFF 326 (358)
Q Consensus 257 ~~~s~~~--~----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~ 326 (358)
+.+++++ . ..++++|.++|+++|++|++|++|+ |+...+... ..++ ..|++++ +|+|+ |.+.|++++
T Consensus 189 ~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~r~G~~~~ 265 (397)
T 2ord_A 189 LEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVLTT--AKGLGGGVPIGAVIV 265 (397)
T ss_dssp ECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEE
T ss_pred EecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCeeee--ccccCCCcCeEEEEE
Confidence 8766554 3 2468999999999999999999996 654333211 0112 3787744 79996 456788888
Q ss_pred eCC
Q 018300 327 KKD 329 (358)
Q Consensus 327 ~~~ 329 (358)
+++
T Consensus 266 ~~~ 268 (397)
T 2ord_A 266 NER 268 (397)
T ss_dssp CST
T ss_pred chH
Confidence 775
No 204
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.41 E-value=4.1e-12 Score=123.36 Aligned_cols=197 Identities=15% Similarity=0.123 Sum_probs=118.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
.+|.|.+++...+.. ...++ .++ ..+. .+..++++++++|.+. .++++||++|+..++..+.
T Consensus 53 ~~p~v~~a~~~~~~~-~~~~~--~~~--~~~~----~~~l~~~la~~~~~~~-----v~~~~gg~ea~~~al~~~~~~~~ 118 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDK-LLHTS--NLY--YNEN----IAAAAKNLAKASALER-----VFFTNSGTESIEGAMKTARKYAF 118 (395)
T ss_dssp SCHHHHHHHHHHHTT-CSCCC--TTS--BCHH----HHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccccc--ccc--CCHH----HHHHHHHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 479999999877643 22222 111 2232 2334567888888432 3667789999999998764
Q ss_pred ---cCCCEEEecCCCCCcccccccc-cc---h-hccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 018300 190 ---KPHDRIMGLDLPHGGHLSHGFM-TP---K-RRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (358)
Q Consensus 190 ---~pGD~Vl~~~~~~ggh~s~~~~-~~---~-~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~ 261 (358)
.+||+|++.++.+.|....... +. . ......+. +...++ ..|+++|++.++ .++++|++.+.+
T Consensus 119 ~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~d~~~l~~~l~-~~~~~v~~~~~~ 189 (395)
T 3nx3_A 119 NKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLIS--GVKFAK------YNDISSVEKLVN-EKTCAIILESVQ 189 (395)
T ss_dssp HTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCS--CEEEEC------TTCHHHHHTTCC-TTEEEEEEESEE
T ss_pred ccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCC--CcEEeC------CCCHHHHHHhcc-CCeEEEEEeCcc
Confidence 4589999988766543210000 00 0 00000011 112211 237999999886 367788776533
Q ss_pred --CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCc-cCcEEEEEEeCCCC
Q 018300 262 --YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPV 331 (358)
Q Consensus 262 --~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~~~ 331 (358)
.|...+ +++|.++|++||++|++|++|+ |+...+.. . ...+ ..|++++| |++. |.+.|++++++
T Consensus 190 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-~~g~~g~~~~~~~~~~~~d~~t~s--K~~~~G~~~G~~~~~~--- 263 (395)
T 3nx3_A 190 GEGGINPANKDFYKALRKLCDEKDILLIADEIQC-GMGRSGKFFAYEHAQILPDIMTSA--KALGCGLSVGAFVINQ--- 263 (395)
T ss_dssp CTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGTTTSCCEEEEECH---
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCcCCcchhHHhcCCCCCEEEec--ccccCCCceEEEEEch---
Confidence 233444 9999999999999999999987 33222211 1 1122 45777655 8874 55779998887
Q ss_pred chhHH-HHHHhh
Q 018300 332 LGVEL-ESAINN 342 (358)
Q Consensus 332 ~~~~~-~~~i~~ 342 (358)
++ .+.+..
T Consensus 264 ---~~~~~~~~~ 272 (395)
T 3nx3_A 264 ---KVASNSLEA 272 (395)
T ss_dssp ---HHHHHHSCT
T ss_pred ---hhhhhhcCC
Confidence 55 666644
No 205
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.41 E-value=2.4e-12 Score=127.88 Aligned_cols=231 Identities=15% Similarity=0.152 Sum_probs=140.9
Q ss_pred cccccChH-HHHHHHHHHHHhhhccccccc-------CCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHH
Q 018300 82 SLGEADPE-VCEIITKEKERQFKSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (358)
Q Consensus 82 ~l~~~d~~-~~~~i~~e~~~~~~~i~lias-------~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~ 153 (358)
.+...+|+ ++.+.++-+......+||--+ ..++.+.|++|....+.+....+|.. ..|.+ ++.+.+
T Consensus 23 ~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p---~~G~p---~lr~ai 96 (420)
T 4h51_A 23 KIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLP---ISGYQ---PFIDEA 96 (420)
T ss_dssp TCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCC---TTCCH---HHHHHH
T ss_pred CCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCC---cCChH---HHHHHH
Confidence 35555443 666665544333345776522 23556899999876665555445654 34554 455544
Q ss_pred HHHHHHHcCCCCC-CCcceEEeCCCHHHHHHHHH----HhccCCCEEEecCCCCCcccccccccchhccccCCce-EEEE
Q 018300 154 QKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYT----AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESM 227 (358)
Q Consensus 154 ~~~la~lfg~~~~-~~~v~V~~~SGt~A~~~a~~----all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~~ 227 (358)
.+. +||-... +....++..+||.|+..++. .+++|||+|++++|.+..|.. .+...|.. +...
T Consensus 97 a~~---~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~--------i~~~aG~~~V~~~ 165 (420)
T 4h51_A 97 VKI---IYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYG--------VVKAAGWKNICTY 165 (420)
T ss_dssp HHH---HHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHH--------HHHHTTCCCEEEE
T ss_pred HHH---hcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHH--------HHHHcCCeEEEee
Confidence 433 3454321 11123556778877765554 346799999999997776632 23445543 3333
Q ss_pred eceecCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCCC--CC---CHHHHHHHHHHcCCEEEEeccccccccccCCccC
Q 018300 228 PYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (358)
Q Consensus 228 ~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~s~~~~--~~---dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~ 300 (358)
++ .++++..+|.+.+.+.+... ++++++.+.++||+ .. ++++|.++|+++++++++|+++. |+.+++....
T Consensus 166 ~~-~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~-~~~~~~~~~~ 243 (420)
T 4h51_A 166 AY-YDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQ-GYASGSLDTD 243 (420)
T ss_dssp EC-EEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TTTTSCHHHH
T ss_pred cc-ccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhh-hhccCCcccc
Confidence 33 33356678999888776543 34566667777765 32 47889999999999999999954 6654432111
Q ss_pred CC------C-CC-cEEEEcCcCcC--ccCcEEEEEEeCCCC
Q 018300 301 PF------K-YC-DVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (358)
Q Consensus 301 pl------~-ga-Div~~S~hK~L--~Gp~GG~I~~~~~~~ 331 (358)
++ + +. =+++.|++|++ .|+|.|+++...+.+
T Consensus 244 ~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~ 284 (420)
T 4h51_A 244 AYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDK 284 (420)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCH
T ss_pred hHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCH
Confidence 11 1 11 27788999975 799999998877643
No 206
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.40 E-value=2.2e-12 Score=127.18 Aligned_cols=184 Identities=16% Similarity=0.124 Sum_probs=116.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
.+|.|.+++.+.+.. +. +....| ..+. ....++++++++|.+. .++++||++|+..++.++..
T Consensus 74 ~~p~v~~ai~~~~~~-~~--~~~~~~--~~~~----~~~l~~~la~~~g~~~-----v~~~~ggteA~~~al~~~~~~~~ 139 (420)
T 2pb2_A 74 CHPALVEALKSQGET-LW--HTSNVF--TNEP----ALRLGRKLIDATFAER-----VLFMNSGTEANETAFKLARHYAC 139 (420)
T ss_dssp TCHHHHHHHHHHHTT-CC--CCCTTS--CCHH----HHHHHHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cc--cccCcc--CCHH----HHHHHHHHHhhCCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 589999999877643 22 111112 2232 2335567888888543 35667889999999998765
Q ss_pred ----CCC-EEEecCCCCCcccccccccchhccccCCce-----E-----EEEeceecCCCCCCCHHHHHHHhhhcCCeEE
Q 018300 191 ----PHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (358)
Q Consensus 191 ----pGD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~~iD~d~le~~i~~~~~klI 255 (358)
+|+ +|++.++.+.+.... .....|.. + .+..++ ..|+++|++.+++ ++++|
T Consensus 140 ~~~~~g~~~vi~~~~~yh~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~------~~d~~~le~~i~~-~~~~v 205 (420)
T 2pb2_A 140 VRHSPFKTKIIAFHNAFHGRSLF-------TVSVGGQPKYSDGFGPKPADIIHVP------FNDLHAVKAVMDD-HTCAV 205 (420)
T ss_dssp HHTCTTCCEEEEETTCCCCSSHH-------HHHHSSCHHHHTTSSSCCSCEEEEC------TTCHHHHHHHCCT-TEEEE
T ss_pred hccCCCCCEEEEEeCCcCCcCHH-------HHHhcCCccccccCCCCCCCeEEec------CCCHHHHHHHhcc-CceEE
Confidence 784 899888765443210 11122211 0 112211 1389999998864 78888
Q ss_pred EEcCCCC--CC----CCCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc-CcEEEEE
Q 018300 256 IAGASAY--PR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMIF 325 (358)
Q Consensus 256 i~~~s~~--~~----~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G-p~GG~I~ 325 (358)
++++.++ +. ..++++|.++|+++|++|++|++|. |+...|... ..++ ..|+++ ++|+|++ .+.|+++
T Consensus 206 i~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g~~~~g~~~~~~~~~~~~diit--~sK~l~~G~~iG~~~ 282 (420)
T 2pb2_A 206 VVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-GMGRTGDLFAYMHYGVTPDILT--SAKALGGGFPVSAML 282 (420)
T ss_dssp EECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSCCEEEE
T ss_pred EEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-CcccCCcHHHHHhcCCCCCeEE--ecccccCCCceEEEE
Confidence 8875433 22 2468999999999999999999994 654333211 1122 578875 5699853 4678888
Q ss_pred EeC
Q 018300 326 FKK 328 (358)
Q Consensus 326 ~~~ 328 (358)
+++
T Consensus 283 ~~~ 285 (420)
T 2pb2_A 283 TTQ 285 (420)
T ss_dssp ECH
T ss_pred EhH
Confidence 876
No 207
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.39 E-value=9.2e-12 Score=122.67 Aligned_cols=194 Identities=15% Similarity=0.088 Sum_probs=115.8
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc--C
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--p 191 (358)
.+|.|.+++...+......+|+ .+. ....+++++++++ +.+ ..++++|||+|+..++..+.. +
T Consensus 72 ~~p~v~~a~~~~~~~~~~~~~~-------~~~----~~~l~~~la~~~~-~~~---~v~~~~sGsea~~~ai~~a~~~~~ 136 (434)
T 3l44_A 72 AHPHITKAITTAAENGVLYGTP-------TAL----EVKFAKMLKEAMP-ALD---KVRFVNSGTEAVMTTIRVARAYTG 136 (434)
T ss_dssp TCHHHHHHHHHHHHHCSCCSSC-------CHH----HHHHHHHHHHHCT-TCS---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCcCCCCC-------CHH----HHHHHHHHHHhCC-CCC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 4899999998877543222222 222 2224456788886 332 245667899999999987654 7
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCC-------------CCCHHHHHHHhhh--cCCeEEE
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-------------LVDYDMLEKTAIL--FRPKLII 256 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------------~iD~d~le~~i~~--~~~klIi 256 (358)
+|+|++.++.+.|+... .....+.......++. ..+ ..|+++|++.++. .++++|+
T Consensus 137 ~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 207 (434)
T 3l44_A 137 RTKIMKFAGCYHGHSDL-------VLVAAGSGPSTLGTPD--SAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAIL 207 (434)
T ss_dssp CCEEEEETTCCCCSSGG-------GGBC-------CCCBS--STTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEE
T ss_pred CCEEEEEcCccCCCcHH-------HHhhcCCcccccCCCC--cCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEE
Confidence 89999988765443211 1111221110000000 001 1289999998864 2457788
Q ss_pred EcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCcEEEEEE
Q 018300 257 AGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFF 326 (358)
Q Consensus 257 ~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~ 326 (358)
+++.+ .|...+ +++|.++|++||++||+|++|. |+ ..+... ..++ ..|++++ +|+++ |.+.|++++
T Consensus 208 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g~-~~g~~~~~~~~~~~~di~t~--sK~~~~G~~iG~~~~ 283 (434)
T 3l44_A 208 VEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-AF-RFMYGGAQDLLGVTPDLTAL--GKVIGGGLPIGAYGG 283 (434)
T ss_dssp ECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TT-TSSSSCHHHHHTCCCSEEEE--EGGGGTTSSCEEEEE
T ss_pred EcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-ce-eccccHHHHHcCCCCCeeeh--hhhhcCCcCeeeEEE
Confidence 87544 234555 9999999999999999999986 54 333211 0112 4577655 49884 456788888
Q ss_pred eCCCCchhHHHHHHh
Q 018300 327 KKDPVLGVELESAIN 341 (358)
Q Consensus 327 ~~~~~~~~~~~~~i~ 341 (358)
++ ++.+.+.
T Consensus 284 ~~------~i~~~~~ 292 (434)
T 3l44_A 284 KK------EIMEQVA 292 (434)
T ss_dssp CH------HHHTTBT
T ss_pred cH------HHHHhhc
Confidence 76 5555544
No 208
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.38 E-value=8.9e-12 Score=122.55 Aligned_cols=199 Identities=17% Similarity=0.104 Sum_probs=116.2
Q ss_pred cHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCCHHHHHHHHHHhcc-CC
Q 018300 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK-PH 192 (358)
Q Consensus 115 s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~-~~~~~v~V~~~SGt~A~~~a~~all~-pG 192 (358)
+|.|++++...+.... . +...+| ..+.. ...++++++++|.+ .+ ..+++++|++|+..++.++.. +|
T Consensus 61 ~p~v~~a~~~~~~~~~-~-~~~~~~--~~~~~----~~l~~~la~~~~~~~~~---~v~~~~gg~ea~~~ai~~~~~~~~ 129 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLA-H-AAANDF--YNIPQ----LELAKKLVTYSPGNFQK---KVFFSNSGTEAIEASIKVVKNTGR 129 (419)
T ss_dssp CHHHHHHHHHHHTTSC-C-CSCSCS--CCHHH----HHHHHHHHHHSSCSSCE---EEEEESSHHHHHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHhhCc-c-cccccc--CCHHH----HHHHHHHHHhCCCCcCC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 7999999988764321 1 111112 12222 22445688999986 43 134456778899999987643 49
Q ss_pred CEEEecCCCCCccccccc-cc----chh-ccccCCceEEEEeceecCCC----CC-----------CCHHHHH-HHhhh-
Q 018300 193 DRIMGLDLPHGGHLSHGF-MT----PKR-RVSGTSIYFESMPYRLDEST----GL-----------VDYDMLE-KTAIL- 249 (358)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~-~~----~~~-~~~~~g~~~~~~~~~~~~~~----~~-----------iD~d~le-~~i~~- 249 (358)
|+|++.++.+.|...... .. ... ........+..++ .+... +. +|+++|+ +.++.
T Consensus 130 ~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~ 207 (419)
T 2eo5_A 130 KYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVP--YPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNL 207 (419)
T ss_dssp CEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEEC--CCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHT
T ss_pred CcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEEC--CCccccccccccccccchhhHHHHHHHHHHHHHhhc
Confidence 999998876544321000 00 000 0000011233343 32110 11 4688998 87764
Q ss_pred ---cCCeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCc
Q 018300 250 ---FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR 317 (358)
Q Consensus 250 ---~~~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~ 317 (358)
.++++|++++.+ .|...+ +++|.++|+++|++|++|++|+ |+...|.. . ..++ ..|+++ ++|+|+
T Consensus 208 ~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-~~g~~g~~~~~~~~~~~~d~~t--~sK~~~ 284 (419)
T 2eo5_A 208 VPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQM-GLGRTGKLFAIENFNTVPDVIT--LAKALG 284 (419)
T ss_dssp CCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE--ECGGGG
T ss_pred cCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCcchhhHHhcCCCCCEEE--eccccc
Confidence 356788887654 354455 9999999999999999999997 33222221 1 1112 467775 559986
Q ss_pred c--CcEEEEEEeCC
Q 018300 318 G--PRGGMIFFKKD 329 (358)
Q Consensus 318 G--p~GG~I~~~~~ 329 (358)
+ .+.|+++++++
T Consensus 285 ~G~~riG~~~~~~~ 298 (419)
T 2eo5_A 285 GGIMPIGATIFRKD 298 (419)
T ss_dssp TTTSCCEEEEEEGG
T ss_pred CCccceEEEEEchH
Confidence 4 56699988874
No 209
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.37 E-value=6.3e-12 Score=123.71 Aligned_cols=202 Identities=12% Similarity=0.054 Sum_probs=116.4
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
.+|.|.+++...+... ...++. +| -.+ .....+++++++++.+.+ ..++++||++|+..++.++.
T Consensus 46 ~~p~v~~a~~~~~~~~-~~~~~~-~~--~~~----~~~~l~~~la~~~~~~~~---~v~~~~gg~ea~~~al~~~~~~~~ 114 (430)
T 3i4j_A 46 GRAEVGERMAAQAARL-PFVHGS-QF--SSD----VLEEYAGRLARFVGLPTF---RFWAVSGGSEATESAVKLARQYHV 114 (430)
T ss_dssp CCHHHHHHHHHHHHHC-CCCCTT-TC--EEH----HHHHHHHHHHHHTTCTTC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cccccc-cc--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHHHH
Confidence 3889999988776542 111111 11 122 233355678899987654 23556678899999998875
Q ss_pred ----cCCCEEEecCCCCCcccccccccchhccccCCc--------------eEEEEeceecCCCCCCCHHHHHHHhhh--
Q 018300 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--------------YFESMPYRLDESTGLVDYDMLEKTAIL-- 249 (358)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~iD~d~le~~i~~-- 249 (358)
.+||+|++.++.+.|+.... ....+. .+..++++-....+..|+++|++.++.
T Consensus 115 ~~g~~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 187 (430)
T 3i4j_A 115 ERGEPGRFKVITRVPSYHGASLGS-------LAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREG 187 (430)
T ss_dssp HTTCTTCCEEEEETTC--------------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHC
T ss_pred hcCCCCCcEEEEEeCCcCCCCccc-------ccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcC
Confidence 45789999887655432110 011111 011111100000012366889888864
Q ss_pred -cCCeEEEEcCCCC---CCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCC-C-CCcEEEEcCcCcCc
Q 018300 250 -FRPKLIIAGASAY---PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-K-YCDVVTTTTHKSLR 317 (358)
Q Consensus 250 -~~~klIi~~~s~~---~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl-~-gaDiv~~S~hK~L~ 317 (358)
.++++|++++.+. |...+ +++|.++|+++|++||+|++|+ |+...|... ..+ + ..|++++| |+|.
T Consensus 188 ~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~~~~g~~~~~~~~~~~~~di~t~s--K~l~ 264 (430)
T 3i4j_A 188 PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMS-GMGRCGSPLALSRWSGVTPDIAVLG--KGLA 264 (430)
T ss_dssp GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTTCCCSEEEEC--GGGT
T ss_pred CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhhhhcCCCCcEEEEc--cccc
Confidence 3456778776443 22334 8999999999999999999987 443333211 112 2 35777655 9985
Q ss_pred -c-CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 318 -G-PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 318 -G-p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
| .+.|++++++ ++.+.+..
T Consensus 265 ~G~~r~G~~~~~~------~i~~~~~~ 285 (430)
T 3i4j_A 265 AGYAPLAGLLAAP------QVYETVMG 285 (430)
T ss_dssp TTSSCCEEEEECH------HHHHHHHH
T ss_pred CCccccEEEEECH------HHHHHHhc
Confidence 4 5668998876 67676664
No 210
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.36 E-value=1.7e-11 Score=120.53 Aligned_cols=190 Identities=17% Similarity=0.100 Sum_probs=116.6
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
.+|.|.+++...+..... +. + -.+ .....+++++++++ +.+ ..++++||++|+..++... ...
T Consensus 69 ~~p~v~~a~~~~~~~~~~--~~---~--~~~----~~~~la~~l~~~~~-~~~---~v~~~~ggsea~~~al~~a~~~~~ 133 (427)
T 3fq8_A 69 AHPEVIEALKVAMEKGTS--FG---A--PCA----LENVLAEMVNDAVP-SIE---MVRFVNSGTEACMAVLRIMRAYTG 133 (427)
T ss_dssp TCHHHHHHHHHHHTTCSC--CS---S--CCH----HHHHHHHHHHHHST-TCS---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCCC--cC---C--CCH----HHHHHHHHHHHhCC-CCC---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 589999999877643211 11 1 122 33345667888887 332 2456678899999998543 234
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceE-----------------EEEeceecCCCCCCCHHHHHHHhhhc--CC
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-----------------ESMPYRLDESTGLVDYDMLEKTAILF--RP 252 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~-----------------~~~~~~~~~~~~~iD~d~le~~i~~~--~~ 252 (358)
+|+|++.++.+.|..... ....+... .+..++. -|+++|++.+++. ++
T Consensus 134 ~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~ 200 (427)
T 3fq8_A 134 RDKIIKFEGCYHGHADMF-------LVKAGSGVATLGLPSSPGVPKKTTANTLTTPY------NDLEAVKALFAENPGEI 200 (427)
T ss_dssp CCEEEEEETCCCCSCGGG-------CSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET------TCHHHHHHHHHHSTTTE
T ss_pred CCEEEEECCCcCCCCHHH-------HHhcCCcccccCCCCCCCCCCcccCceeecCC------CCHHHHHHHHHhCCCCE
Confidence 578888776554432110 01111100 0111111 1899999988764 56
Q ss_pred eEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCcEE
Q 018300 253 KLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGG 322 (358)
Q Consensus 253 klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~GG 322 (358)
++|++++.+ .|...+ +++|.++|++||++||+|++|+ |+ ..+... ..++ ..|++++| |+|+ |.+.|
T Consensus 201 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~t~s--K~~~~G~~~G 276 (427)
T 3fq8_A 201 AGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFGVTPDLTTLG--KIIGGGLPVG 276 (427)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTTCCCSEEEEC--GGGGTTSSCE
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcCCCCChhhhh--hhhhCCcceE
Confidence 788887643 344566 9999999999999999999997 66 333210 1122 45777665 9985 55789
Q ss_pred EEEEeCCCCchhHHHHHHh
Q 018300 323 MIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~ 341 (358)
++++++ ++.+.+.
T Consensus 277 ~~~~~~------~~~~~~~ 289 (427)
T 3fq8_A 277 AYGGKR------EIMQLVA 289 (427)
T ss_dssp EEEECH------HHHTTBT
T ss_pred EEEEcH------HHHHhhc
Confidence 998876 5655554
No 211
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.36 E-value=2.4e-12 Score=125.41 Aligned_cols=191 Identities=9% Similarity=-0.044 Sum_probs=116.4
Q ss_pred hcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEE-eCCCHHHH
Q 018300 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSPAN 181 (358)
Q Consensus 103 ~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~-~~SGt~A~ 181 (358)
..+++.+++..+|+.|++++.... +. ..++ ..+ +... .++.+.+++++++++|++..+ ..++ +++|++|+
T Consensus 40 ~~~~~~~~~~~~~~~v~~a~~~~~-~~-~~~~-~~~---~~~~-~~~~~~~~~~la~~~g~~~~~--~i~~~t~g~t~al 110 (398)
T 2fyf_A 40 RDGRFGSGPSKVRLEQLQTLTTTA-AA-LFGT-SHR---QAPV-KNLVGRVRSGLAELFSLPDGY--EVILGNGGATAFW 110 (398)
T ss_dssp SSCBCCSSSCCCCHHHHHGGGTTT-TT-TTTS-CTT---SHHH-HHHHHHHHHHHHHHTTCCTTC--EEEEEETCHHHHH
T ss_pred CCccccCCCCCCCHHHHHHHhhcC-CC-ccCc-CcC---CHHH-HHHHHHHHHHHHHHhCCCCCc--eEEEeCCchhHHH
Confidence 566777888899999999987621 01 0110 011 2233 233445788999999997421 1233 56778899
Q ss_pred HHHHHHhccCC-CEEEecCCCCCcccccccccchhccccC--CceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 018300 182 FEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (358)
Q Consensus 182 ~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~ 258 (358)
..++.++++|| |.| ....|+ +.+. ...... |..+..++ ++ ++..+|. + +. .++|+|++.
T Consensus 111 ~~~~~~l~~~gv~~v--~~~~~~----~~~~---~~~~~~~~g~~~~~v~--~~-~g~~~~~-~----i~-~~~~~v~~~ 172 (398)
T 2fyf_A 111 DAAAFGLIDKRSLHL--TYGEFS----AKFA---SAVSKNPFVGEPIIIT--SD-PGSAPEP-Q----TD-PSVDVIAWA 172 (398)
T ss_dssp HHHHHHTCSSCEEEE--ECSHHH----HHHH---HHHHHCTTSCCCEEEE--CC-TTCCCCC-C----CC-TTCSEEEEE
T ss_pred HHHHHHhcCCCeEEE--eCCHHH----HHHH---HHHHHhCCCCceEEEe--cC-CCCCCCc-c----cc-CCCCEEEEe
Confidence 99999999998 544 222221 1000 011122 44334444 44 2223332 1 33 368888775
Q ss_pred CCC--CCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCCCCcEEEEcCcCcCccCc-EEEEEEeC
Q 018300 259 ASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR-GGMIFFKK 328 (358)
Q Consensus 259 ~s~--~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~gaDiv~~S~hK~L~Gp~-GG~I~~~~ 328 (358)
.++ +|...|+++|.++ +|+++++|++|+.|.. +.+++++|++++|+||+++++. .|+++.++
T Consensus 173 ~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~-----~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~ 237 (398)
T 2fyf_A 173 HNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGL-----PVDIAETDAYYFAPQKNFASDGGLWLAIMSP 237 (398)
T ss_dssp SEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTS-----CCCGGGCSEEEECTTSTTCSCSSEEEEEECH
T ss_pred CcCCCcceecchHHhhhh---cCCeEEEEeccccCCc-----ccCcccCcEEEEecCcccCCCCceEEEEECH
Confidence 443 4667888888777 8999999999986542 2223368999999999987663 47888876
No 212
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.36 E-value=1.1e-11 Score=122.26 Aligned_cols=194 Identities=16% Similarity=0.078 Sum_probs=115.3
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
.+|.|.+++...+.... .|.. ..+.. +....++++++++++....+ ..++++||++|+..++..+ ..+
T Consensus 60 ~~p~v~~a~~~~~~~~~--~~~~---~~~~~---~~~~~l~~~la~~~~~~~~~--~v~~~~ggsea~~~al~~~~~~~~ 129 (439)
T 3dxv_A 60 GHPAIVAAVSAAAANPA--GATI---LSASN---APAVTLAERLLASFPGEGTH--KIWFGHSGSDANEAAYRAIVKATG 129 (439)
T ss_dssp SCHHHHHHHHHHHHSCS--CSCS---SSSEE---HHHHHHHHHHHHTTTCTTTE--EEEEESSHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHhcc--Cccc---cccCC---HHHHHHHHHHHHhCCCCCCC--EEEEeCCHHHHHHHHHHHHHHHhC
Confidence 68999999987765421 1221 11221 23334566788888654311 2466778999999999875 446
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceE------------EEEeceecCCCCCC-----CHHHHHHHhh---hcC
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF------------ESMPYRLDESTGLV-----DYDMLEKTAI---LFR 251 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~------------~~~~~~~~~~~~~i-----D~d~le~~i~---~~~ 251 (358)
+++|++.++.+.|.... .....+... ....++.+. .... |+++|++.+. ..+
T Consensus 130 ~~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l~~~~~~~ 201 (439)
T 3dxv_A 130 RSGVIAFAGAYHGCTVG-------SMAFSGHSVQADAAKADGLILLPYPDPYRP-YRNDPTGDAILTLLTEKLAAVPAGS 201 (439)
T ss_dssp CCEEEEETTCCCCSSHH-------HHCC-------------CEEEECCCCSSSC-BTTBTTSHHHHHHHHHHHHTSCTTC
T ss_pred CCEEEEECCCCCCCcHH-------HHhhcCCCchhhccccCCCCCCcEEcCCCc-ccccccHHHHHHHHHHHHHhcCCCC
Confidence 77888776544332110 111222100 011111111 1111 7899999883 335
Q ss_pred CeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCC-cc-CCCC-CCcEEEEcCcCcCc-cCcE
Q 018300 252 PKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLR-GPRG 321 (358)
Q Consensus 252 ~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~-~~-~pl~-gaDiv~~S~hK~L~-Gp~G 321 (358)
+++|++++.+ .|...+ +++|.++|++||++||+|++|+ |+...|. .. ..++ ..|++ |++|++. |.+.
T Consensus 202 ~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~di~--s~sK~~~~G~ri 278 (439)
T 3dxv_A 202 IGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPDIL--VLGKGLGGGLPL 278 (439)
T ss_dssp EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCSEE--EECGGGGTTSCC
T ss_pred EEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCCEE--EEcchhcCCcce
Confidence 6788887543 345556 9999999999999999999997 5533332 11 1122 46777 5569884 4677
Q ss_pred EEEEEeC
Q 018300 322 GMIFFKK 328 (358)
Q Consensus 322 G~I~~~~ 328 (358)
|++++++
T Consensus 279 G~~~~~~ 285 (439)
T 3dxv_A 279 SAVIAPA 285 (439)
T ss_dssp EEEEEEH
T ss_pred EEEEECH
Confidence 9999987
No 213
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.35 E-value=1.1e-11 Score=122.13 Aligned_cols=198 Identities=18% Similarity=0.149 Sum_probs=117.9
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
.+|.|.+++.+.+.+....+ | ..+ .....+++++++++ ..+ ..++++||++|+..++.+. +.+
T Consensus 73 ~~~~v~~a~~~~~~~~~~~~-----~--~~~----~~~~l~~~la~~~~-~~~---~v~~~~sgseA~~~al~~ar~~~~ 137 (434)
T 2epj_A 73 KHPRVLEAVEEALARGWLYG-----A--PGE----AEVLLAEKILGYVK-RGG---MIRFVNSGTEATMTAIRLARGYTG 137 (434)
T ss_dssp TCHHHHHHHHHHHHTCSCCS-----S--CCH----HHHHHHHHHHHHHC-TTC---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCCCCC-----C--CCH----HHHHHHHHHHHhCC-CCC---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 68999999988775421111 1 122 23335566888884 222 2356778999999999862 445
Q ss_pred CCEEEecCCCCCcccccccccchhc------cccCCce----EEEEeceecCCCCCCCHHHHHHHhhh--cCCeEEEEcC
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRR------VSGTSIY----FESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGA 259 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~------~~~~g~~----~~~~~~~~~~~~~~iD~d~le~~i~~--~~~klIi~~~ 259 (358)
+|+|++.++.|.|+........... ....|.. .++..++ ..|+++|++.+++ .++++|++++
T Consensus 138 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ep 211 (434)
T 2epj_A 138 RDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTP------YNDVEALERVFAEYGDRIAGVIVEP 211 (434)
T ss_dssp CCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEE------TTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred CCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecC------CCCHHHHHHHHHhCCCCEEEEEEeC
Confidence 6788887765544321000000000 0001210 0112222 1389999998864 2567888875
Q ss_pred CC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCcc-CcEEEEEEeCC
Q 018300 260 SA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKD 329 (358)
Q Consensus 260 s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~~ 329 (358)
.+ .|...+ +++|.++|+++|++||+|++|+ |+. .+.. . ..++ ..|++ |++|+|++ .++|++++++
T Consensus 212 ~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~-~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~v~~~~- 286 (434)
T 2epj_A 212 VIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFR-LGLEGAQGYFNIEGDII--VLGKIIGGGFPVGAVAGSR- 286 (434)
T ss_dssp SBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTT-SSTTHHHHHHTCCCSEE--EEEGGGGTTSSCEEEEECH-
T ss_pred CcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-cee-CCcchhhHHhCCCCCee--eecchhcCCcceeeeeecH-
Confidence 43 456677 9999999999999999999998 662 2211 0 1112 46776 45699854 4789999886
Q ss_pred CCchhHHHHHHhh
Q 018300 330 PVLGVELESAINN 342 (358)
Q Consensus 330 ~~~~~~~~~~i~~ 342 (358)
++.+.+..
T Consensus 287 -----~~~~~l~~ 294 (434)
T 2epj_A 287 -----EVMSLLTP 294 (434)
T ss_dssp -----HHHTTBTT
T ss_pred -----HHHHhhcc
Confidence 55555543
No 214
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.34 E-value=2e-11 Score=120.03 Aligned_cols=205 Identities=13% Similarity=0.040 Sum_probs=119.9
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc--cC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--~p 191 (358)
.+|.|.+++...+... . +....| ..+ .....+++++++++.+.+ ..++++||++|+..++..+. ..
T Consensus 60 ~~p~v~~a~~~~~~~~-~--~~~~~~--~~~----~~~~l~~~la~~~~~~~~---~v~~~~gg~ea~~~a~~~~~~~~~ 127 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKL-D--HLFSEM--LSR----PVVDLATRLANITPPGLD---RALLLSTGAESNEAAIRMAKLVTG 127 (433)
T ss_dssp TCHHHHHHHHHHHHHC-C--CCCTTC--CCH----HHHHHHHHHHHHSCTTCC---EEEEESCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhC-c--cccccc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 4899999998876542 1 111111 122 222245568889987653 23556688899999997653 34
Q ss_pred CCEEEecCCCCCccccccc-cc--c-hhc--cccCCceEEEEeceecCC---------CCCCCHHHHHHHhhh---cCCe
Q 018300 192 HDRIMGLDLPHGGHLSHGF-MT--P-KRR--VSGTSIYFESMPYRLDES---------TGLVDYDMLEKTAIL---FRPK 253 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~-~~--~-~~~--~~~~g~~~~~~~~~~~~~---------~~~iD~d~le~~i~~---~~~k 253 (358)
+|+|++.++.+.|...... .+ . +.. ....+ +..++++.... .+.+|+++|++.++. .+++
T Consensus 128 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 205 (433)
T 1zod_A 128 KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLA 205 (433)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCeEEEECCCcCCCChhHHhhcCCccccccCCCCCC--ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeE
Confidence 6899988876544211000 00 0 000 00112 33443321100 012468999998864 3567
Q ss_pred EEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C-CCcEEEEcCcCcCc-cCcEE
Q 018300 254 LIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLR-GPRGG 322 (358)
Q Consensus 254 lIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~-gaDiv~~S~hK~L~-Gp~GG 322 (358)
+|++++.+ .|...+ +++|.++|+++|++||+|++|+ |+...+.. ..+ + ..|+++ ++|+|+ |.+.|
T Consensus 206 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~g~~g~~-~~~~~~~~~~di~s--~sK~~~~G~~ig 281 (433)
T 1zod_A 206 AFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQT-GVGRTGTM-FACQRDGVTPDILT--LSKTLGAGLPLA 281 (433)
T ss_dssp EEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEEE--ECHHHHTTSSCE
T ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCchH-hHHhhcCCCCCEEE--ecccccCCCCee
Confidence 88887543 354444 9999999999999999999998 43222221 111 2 457764 559985 45669
Q ss_pred EEEEeCCCCchhHHHHHHhh
Q 018300 323 MIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~ 342 (358)
++++++ ++.+.+..
T Consensus 282 ~~~~~~------~~~~~~~~ 295 (433)
T 1zod_A 282 AIVTSA------AIEERAHE 295 (433)
T ss_dssp EEEECH------HHHHHHHH
T ss_pred EEEEhH------HHHHhhcc
Confidence 999887 56666655
No 215
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.34 E-value=4.3e-11 Score=118.68 Aligned_cols=206 Identities=13% Similarity=0.007 Sum_probs=120.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc----
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all---- 189 (358)
.+|.|.+|+...+.... +.. ..+..+ .....+++++++++.+.+ .++++||++|+..++..+.
T Consensus 66 ~~p~v~~A~~~~~~~~~---~~~--~~~~~~----~~~~la~~l~~~~~~~~~----v~~~~ggseA~~~al~~~~~~~~ 132 (452)
T 3n5m_A 66 GRKELAEAAYKQLQTLS---YFP--MSQSHE----PAIKLAEKLNEWLGGEYV----IFFSNSGSEANETAFKIARQYYA 132 (452)
T ss_dssp CCHHHHHHHHHHHTTCC---CCC--TTSEEH----HHHHHHHHHHHHHTSCEE----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---Ccc--cccCCH----HHHHHHHHHHHhCCCCce----EEEeCchHHHHHHHHHHHHHHHH
Confidence 47999999987764321 111 111223 233356678888887653 3566789999999998876
Q ss_pred -c---CCCEEEecCCCCCccccccc-ccchhcc----ccCCceEEEEeceecCCCCCCC---------HHHHHHHhh---
Q 018300 190 -K---PHDRIMGLDLPHGGHLSHGF-MTPKRRV----SGTSIYFESMPYRLDESTGLVD---------YDMLEKTAI--- 248 (358)
Q Consensus 190 -~---pGD~Vl~~~~~~ggh~s~~~-~~~~~~~----~~~g~~~~~~~~~~~~~~~~iD---------~d~le~~i~--- 248 (358)
. ++|+|++.++.+.|+..-.. .+..... .-....+..++.+.......-| +++|++.++
T Consensus 133 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 212 (452)
T 3n5m_A 133 QKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWEL 212 (452)
T ss_dssp TTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHC
T ss_pred hcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcC
Confidence 5 88999998876654321000 0000000 0000012222221110000112 899999886
Q ss_pred hcCCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcCcCcCc-c
Q 018300 249 LFRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-G 318 (358)
Q Consensus 249 ~~~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~hK~L~-G 318 (358)
..++++|++++. +.|...+ +++|+++|++||++||+|++|+ |+...|.. . ...+ ..|++++| |++. |
T Consensus 213 ~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~t~s--K~l~~G 289 (452)
T 3n5m_A 213 SETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVIC-GFGRTGKAFGFMNYDVKPDIITMA--KGITSA 289 (452)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTCCCSEEEEC--GGGGTT
T ss_pred CCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcccccchhhhcCCCCCEEeec--ccccCC
Confidence 235678888765 3344454 9999999999999999999987 44322321 1 1112 45777655 8874 4
Q ss_pred -CcEEEEEEeCCCCchhHHHHHHh
Q 018300 319 -PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 319 -p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.+.|++++++ ++.+.+.
T Consensus 290 ~~~ig~~~~~~------~i~~~~~ 307 (452)
T 3n5m_A 290 YLPLSATAVKR------EIYEAFK 307 (452)
T ss_dssp SSCCEEEEEEH------HHHGGGC
T ss_pred CcceEEEEECH------HHHHHHh
Confidence 5668998887 5666553
No 216
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.33 E-value=2.2e-11 Score=119.97 Aligned_cols=194 Identities=16% Similarity=0.113 Sum_probs=115.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc--C
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--p 191 (358)
.+|.|.+|+...+......+|| .+...+ .+++++++++ ..+ ..++++||++|+..++..+.. +
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~-------~~~~~~----l~~~la~~~~-~~~---~v~~~~~Gsea~~~ai~~a~~~~~ 134 (429)
T 3k28_A 70 ANDRVVEALKAVAERGTSFGAP-------TEIENK----LAKLVIERVP-SIE---IVRMVNSGTEATMSALRLARGYTG 134 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCSSC-------CHHHHH----HHHHHHHHST-TCS---EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhCcCcCCC-------CHHHHH----HHHHHHHhCC-CCC---EEEEeCChHHHHHHHHHHHHHhhC
Confidence 5899999998877543221222 222222 3456788886 332 245667899999999987643 6
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCC-------------CCHHHHHHHhhh--cCCeEEE
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-------------VDYDMLEKTAIL--FRPKLII 256 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------------iD~d~le~~i~~--~~~klIi 256 (358)
+|+|++.++.+.|+... .....+.......++.. .+. -|++++++.++. .++++|+
T Consensus 135 ~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 205 (429)
T 3k28_A 135 RNKILKFIGCYHGHGDS-------LLIKAGSGVATLGLPDS--PGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVI 205 (429)
T ss_dssp CCEEEEEETCCCCSCGG-------GCSSCCTTC-----CCC--TTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEE
T ss_pred CCEEEEECCCcCCCcHH-------HHHhcCCcccccCCCCc--CCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEE
Confidence 78898877654443211 11111211111111100 111 188999998864 2457788
Q ss_pred EcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCcEEEEEE
Q 018300 257 AGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFF 326 (358)
Q Consensus 257 ~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~ 326 (358)
+++.+ .|...+ +++|.++|++||++||+|++|. |+ ..+... ..++ ..|++++ +|+|. |.+.|++++
T Consensus 206 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~t~--sK~~~~G~~iG~~~~ 281 (429)
T 3k28_A 206 VEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GF-RVAYNCGQGYYGVTPDLTCL--GKVIGGGLPVGAYGG 281 (429)
T ss_dssp ECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TT-TSSTTHHHHHHTCCCSEEEE--CGGGGTTSCCEEEEE
T ss_pred EcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchHHHHhCCCCceehh--hhhhcCCCCeEEEEE
Confidence 87543 244555 9999999999999999999985 65 333211 0112 4577655 59984 467799988
Q ss_pred eCCCCchhHHHHHHh
Q 018300 327 KKDPVLGVELESAIN 341 (358)
Q Consensus 327 ~~~~~~~~~~~~~i~ 341 (358)
++ ++.+.+.
T Consensus 282 ~~------~~~~~~~ 290 (429)
T 3k28_A 282 KA------EIMRQVA 290 (429)
T ss_dssp CH------HHHTTBT
T ss_pred cH------HHHhhhc
Confidence 76 5555543
No 217
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.31 E-value=1.4e-11 Score=122.17 Aligned_cols=189 Identities=15% Similarity=0.113 Sum_probs=112.2
Q ss_pred CCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHH---hc
Q 018300 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA---IL 189 (358)
Q Consensus 113 ~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~a---ll 189 (358)
+.+|.|.+++...+.... .+ ++. .++++.++++++++++ +.+ ..++++||++|+..++.+ +.
T Consensus 73 ~~~~~v~~a~~~~~~~~~--~~------~~~---~~~~~~la~~l~~~~~-~~~---~v~~~~gg~eA~~~al~~ar~~~ 137 (453)
T 2cy8_A 73 HGHPRVNAAIAEALSHGV--QY------AAS---HPLEVRWAERIVAAFP-SIR---KLRFTGSGTETTLLALRVARAFT 137 (453)
T ss_dssp BTCHHHHHHHHHHHTTTC--SS------CSS---CHHHHHHHHHHHHHCT-TCS---EEEEESCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCC--CC------CCC---CHHHHHHHHHHHhhCC-CCC---EEEEeCCHHHHHHHHHHHHHHhh
Confidence 368999999988765421 11 111 2456667778888886 332 235667889999999887 55
Q ss_pred cCCCEEEecCCCCCcccccccccchhc----cccCCceE----EEEeceecCCCCCCCHHHHHHHhhh--cCCeEEEEcC
Q 018300 190 KPHDRIMGLDLPHGGHLSHGFMTPKRR----VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGA 259 (358)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~----~~~~g~~~----~~~~~~~~~~~~~iD~d~le~~i~~--~~~klIi~~~ 259 (358)
+ +|+|++.++.|.|+..... ..... ....|... .+..++ ..|+++|++.++. .++++|++++
T Consensus 138 ~-~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ep 209 (453)
T 2cy8_A 138 G-RRMILRFEGHYHGWHDFSA-SGYNSHFDGQPAPGVLPETTANTLLIR------PDDIEGMREVFANHGSDIAAFIAEP 209 (453)
T ss_dssp C-CCEEEEECC-----------------------------CGGGEEEEC------TTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred C-CCEEEEEcCCcCCCchhhH-hhcCCccCCCcCCCCCccccCceeecC------CCCHHHHHHHHHhcCCCEEEEEECC
Confidence 5 4677777765544321100 00000 00011100 011111 2489999998864 2567888876
Q ss_pred CC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCcEEEEEEeC
Q 018300 260 SA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKK 328 (358)
Q Consensus 260 s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~ 328 (358)
.. .|...+ +++|.++|++||++||+|++|+ |+ ..+... ..++ ..|++ |++|+|+ |.++|++++++
T Consensus 210 ~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~v~~~~ 284 (453)
T 2cy8_A 210 VGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLDVQPDLT--CLAKASAGGLPGGILGGRE 284 (453)
T ss_dssp SEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHTCCCSEE--EEEGGGGTTSSCEEEEECH
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhCCCCcEE--EEChhhhCCcceEEEechH
Confidence 43 355566 9999999999999999999997 76 323210 1112 46776 5559996 46889999886
No 218
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.29 E-value=8.3e-11 Score=115.74 Aligned_cols=197 Identities=18% Similarity=0.204 Sum_probs=113.7
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
.+|.|.+++...+......+|+ .+ .....+++++++++ ..+ ..++++||++|+..++... ..+
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~-------~~----~~~~la~~l~~~~~-~~~---~v~~~~sGsea~~~al~~a~~~~~ 134 (429)
T 4e77_A 70 NHPAIRQAVIEAVERGLSFGAP-------TE----MEVKMAQLVTDLVP-TMD---MVRMVNSGTEATMSAIRLARGYTG 134 (429)
T ss_dssp TCHHHHHHHHHHHTTCSCCSSC-------CH----HHHHHHHHHHHHST-TCS---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCcccCCC-------CH----HHHHHHHHHHhhCC-CCC---EEEEeCcHHHHHHHHHHHHHHhhC
Confidence 5899999998877543222222 22 22234556888886 332 2466778999999998754 246
Q ss_pred CCEEEecCCCCCcccccccccch-hcc-----ccCCc----eEEEEeceecCCCCCCCHHHHHHHhhhc--CCeEEEEcC
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPK-RRV-----SGTSI----YFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA 259 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~-~~~-----~~~g~----~~~~~~~~~~~~~~~iD~d~le~~i~~~--~~klIi~~~ 259 (358)
+++|++.+..+.|.......... ... ...+. ......++ ..|+++|++.++.. ++++|++++
T Consensus 135 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ep 208 (429)
T 4e77_A 135 RDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCT------YNDLASVRQAFEQYPQEVACIIVEP 208 (429)
T ss_dssp CCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEEC------TTCHHHHHHHHHHSTTTEEEEEECS
T ss_pred CCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecC------CCCHHHHHHHHHhcCCCEEEEEECC
Confidence 77888876554433210000000 000 00000 00001111 23899999988753 456777765
Q ss_pred CC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCcEEEEEEeCC
Q 018300 260 SA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKD 329 (358)
Q Consensus 260 s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~GG~I~~~~~ 329 (358)
.+ .+...+ +++|.++|+++|++||+|++|+ |+ ..+... ..++ ..|++++ +|+++ |.+.|++++++
T Consensus 209 ~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~~~pdi~t~--sK~~~~G~~~G~~~~~~- 283 (429)
T 4e77_A 209 VAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYHVIPDLTCL--GKIIGGGMPVGAFGGRR- 283 (429)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTTCCCSEEEE--EGGGGTTSCCEEEEECH-
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcCCCCCeeee--cccccCCCCeEEEEECH-
Confidence 43 244455 9999999999999999999998 55 322211 1122 4577654 59985 55788988876
Q ss_pred CCchhHHHHHHh
Q 018300 330 PVLGVELESAIN 341 (358)
Q Consensus 330 ~~~~~~~~~~i~ 341 (358)
++.+.+.
T Consensus 284 -----~~~~~l~ 290 (429)
T 4e77_A 284 -----EVMNALA 290 (429)
T ss_dssp -----HHHTTBT
T ss_pred -----HHHHHhc
Confidence 5555544
No 219
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.29 E-value=4.5e-11 Score=119.12 Aligned_cols=208 Identities=12% Similarity=0.003 Sum_probs=121.8
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
.+|.|.+|+...+.... .+++..++ ..+ .....+++++++++.+.+ ..++++||++|+..++..+.+
T Consensus 67 ~~p~v~~A~~~~~~~~~-~~~~~~~~--~~~----~~~~la~~l~~~~~~~~~---~v~~~~ggseA~~~al~~~~~~~~ 136 (459)
T 4a6r_A 67 GRKDFAEAARRQMEELP-FYNTFFKT--THP----AVVELSSLLAEVTPAGFD---RVFYTNSGSESVDTMIRMVRRYWD 136 (459)
T ss_dssp CCHHHHHHHHHHHHHCS-CCCTTSSS--CCH----HHHHHHHHHHHHSCTTCC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-cccccccc--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 47999999988765421 12222111 223 333356678889887654 235567889999999988865
Q ss_pred -----CCCEEEecCCCCCcccccccc-cc---h-hccccCCceEEEEecee--cCCCCCCC--------HHHHHHHhhh-
Q 018300 191 -----PHDRIMGLDLPHGGHLSHGFM-TP---K-RRVSGTSIYFESMPYRL--DESTGLVD--------YDMLEKTAIL- 249 (358)
Q Consensus 191 -----pGD~Vl~~~~~~ggh~s~~~~-~~---~-~~~~~~g~~~~~~~~~~--~~~~~~iD--------~d~le~~i~~- 249 (358)
++|+|++.++.+.|+...... +. . .........+..++++. +.... .| +++|++.+..
T Consensus 137 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~ 215 (459)
T 4a6r_A 137 VQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEI 215 (459)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHc
Confidence 578999988766543210000 00 0 00000011123333222 10011 35 7888888763
Q ss_pred --cCCeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc
Q 018300 250 --FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG 318 (358)
Q Consensus 250 --~~~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G 318 (358)
.++++|++++.+ .|...+ +++|.++|++||++||+|++|+ |+...|... ..++ ..|++++| |+|.|
T Consensus 216 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~G~~~~~~~~~~~pdi~t~s--K~l~g 292 (459)
T 4a6r_A 216 GADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVIC-GFGRTGEWFGHQHFGFQPDLFTAA--KGLSS 292 (459)
T ss_dssp CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEEC--GGGGT
T ss_pred CCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCCCCCeeehh--hhhcC
Confidence 345778886543 233444 8999999999999999999987 443333211 0112 45787665 99865
Q ss_pred --CcEEEEEEeCCCCchhHHHHHHh
Q 018300 319 --PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 319 --p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.+.|++++++ ++.+.+.
T Consensus 293 g~~~lg~v~~~~------~i~~~~~ 311 (459)
T 4a6r_A 293 GYLPIGAVFVGK------RVAEGLI 311 (459)
T ss_dssp TSSCCEEEEECH------HHHHHHH
T ss_pred CCCCccceeeCH------HHHHHhh
Confidence 6778888877 5666554
No 220
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.28 E-value=8.2e-11 Score=116.73 Aligned_cols=201 Identities=13% Similarity=0.028 Sum_probs=114.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
.+|.|.+++...+... ..+++ ..+..+ .....+++++++++.+.+ ..++++||++|+..++..+..
T Consensus 61 ~~p~v~~A~~~~~~~~-~~~~~---~~~~~~----~~~~la~~l~~~~~~~~~---~v~~~~sGseA~~~al~~~~~~~~ 129 (448)
T 3dod_A 61 RKKELDDAIKKQLGKI-AHSTL---LGMTNV----PATQLAETLIDISPKKLT---RVFYSDSGAEAMEIALKMAFQYWK 129 (448)
T ss_dssp SCHHHHHHHHHHHTTC-SCCCC---SSSEEH----HHHHHHHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cCccc---cccCCH----HHHHHHHHHHHhCCCCCC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 4799999998776432 11111 111223 233356678888865543 245677899999999988765
Q ss_pred -CC----CEEEecCCCCCcccccccccchhccccCCce----------EEEEeceecCCCC-----------CCCHHHHH
Q 018300 191 -PH----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTG-----------LVDYDMLE 244 (358)
Q Consensus 191 -pG----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~-----------~iD~d~le 244 (358)
+| |+|++.++.+.|+... .....+.. .....++.+ +.. ..|+++|+
T Consensus 130 ~~G~~~~~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le 201 (448)
T 3dod_A 130 NIGKPEKQKFIAMKNGYHGDTIG-------AVSVGSIELFHHVYGPLMFESYKAPIP-YVYRSESGDPDECRDQCLRELA 201 (448)
T ss_dssp HTTCTTCCEEEEEC------------------------------------CEEECCC-CCTTSSSCCHHHHHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCCCccHH-------HHHhcCCccccccccCCCCCceEeCCC-ccccCCccchhhhhHHHHHHHH
Confidence 55 9999988765443211 11111110 011111111 111 12588899
Q ss_pred HHhh--hcCCeEEEEcCCC---CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-CCCC-CCcEEEEcC
Q 018300 245 KTAI--LFRPKLIIAGASA---YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTT 312 (358)
Q Consensus 245 ~~i~--~~~~klIi~~~s~---~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~pl~-gaDiv~~S~ 312 (358)
+.++ ..++++|++++.. .|...+ +++|+++|++||++||+|++|+ |+...|.. . ..++ ..|++++|
T Consensus 202 ~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~a~~~~~~~~di~t~s- 279 (448)
T 3dod_A 202 QLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVAT-GFGRTGKMFACEHENVQPDLMAAG- 279 (448)
T ss_dssp HHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC-
T ss_pred HHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcccchhhhhhcCCCCCEEEec-
Confidence 8886 2356778877642 233333 8999999999999999999987 44322321 1 1112 45777655
Q ss_pred cCcCc-c-CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 313 HKSLR-G-PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 313 hK~L~-G-p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
|+|. | .+.|++++++ ++.+.+..
T Consensus 280 -K~l~~G~~~ig~v~~~~------~~~~~~~~ 304 (448)
T 3dod_A 280 -KGITGGYLPIAVTFATE------DIYKAFYD 304 (448)
T ss_dssp -GGGGTTSSCCEEEEEEH------HHHHTTCS
T ss_pred -ccccCCcCceEEEEECH------HHHHHhhh
Confidence 9985 4 3778888887 56666543
No 221
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.28 E-value=2.9e-11 Score=120.90 Aligned_cols=199 Identities=15% Similarity=0.035 Sum_probs=121.4
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
.+|.|.+|+...+... .....+ +| ..+ .....+++++++++.+.+ ..++++||++|+..++..+..
T Consensus 92 ~~p~v~~A~~~~~~~~-~~~~~~-~~--~~~----~~~~L~e~la~~~~~~~~---~v~~~~sGseA~~~Alk~a~~~~~ 160 (457)
T 3tfu_A 92 GHPALDQALTTQLRVM-NHVMFG-GL--THE----PAARLAKLLVDITPAGLD---TVFFSDSGSVSVEVAAKMALQYWR 160 (457)
T ss_dssp TCHHHHHHHHHHHHHC-SCCCSS-SE--ECH----HHHHHHHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cCcccc-cc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCcHHHHHHHHHHHHHHHHH
Confidence 5899999998876542 111101 11 122 222356678899976543 245667899999999988754
Q ss_pred ----CCC-EEEecCCCCCcccccccccchhccccCC-------------ceEEEEeceecCCCCCCCHHHHHHHhhh--c
Q 018300 191 ----PHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDESTGLVDYDMLEKTAIL--F 250 (358)
Q Consensus 191 ----pGD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~iD~d~le~~i~~--~ 250 (358)
+|+ +|++.+..+.|... + .....+ ..+..++++.+ .....|+++|++.++. .
T Consensus 161 ~~g~~g~~~ii~~~~~yhg~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~le~~l~~~~~ 232 (457)
T 3tfu_A 161 GRGLPGKRRLMTWRGGYHGDTF-L------AMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAAFEAQLAQHAG 232 (457)
T ss_dssp HTTCTTCCEEEEETTCCCCSSH-H------HHTTSCCC----------CCCCEEECCCCS-SCCHHHHHHHHHHHHHHGG
T ss_pred hcCCCCCceEEEEcCCcCCccH-H------hhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHHHHHHHHhCCC
Confidence 665 78887765544211 0 001100 01222333222 1123588999998863 3
Q ss_pred CCeEEEEcC-CC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C-CCcEEEEcCcCcCcc-
Q 018300 251 RPKLIIAGA-SA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLRG- 318 (358)
Q Consensus 251 ~~klIi~~~-s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~-gaDiv~~S~hK~L~G- 318 (358)
++++|++++ .+ .|...+ +++|.++|+++|++||+|++|. |+...|.. ..+ + ..|++++ .|.|+|
T Consensus 233 ~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g~gr~G~~-~a~~~~~~~pdiit~--sK~l~gG 308 (457)
T 3tfu_A 233 ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIAT-GFGRTGAL-FAADHAGVSPDIMCV--GKALTGG 308 (457)
T ss_dssp GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEEEE--CGGGGTT
T ss_pred CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCcc-CCccccch-hHhHhcCCCceEEEE--ChhhhCC
Confidence 567888876 33 333333 8999999999999999999976 44322321 111 2 4678754 599977
Q ss_pred -CcEEEEEEeCCCCchhHHHHHHh
Q 018300 319 -PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 319 -p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
++.|++++++ ++.+.+.
T Consensus 309 ~~~lG~v~~~~------~i~~~~~ 326 (457)
T 3tfu_A 309 YLSLAATLCTA------DVAHTIS 326 (457)
T ss_dssp SSCCEEEEEEH------HHHHHHH
T ss_pred CcceEEEEEcH------HHHHHhh
Confidence 6889999887 6767664
No 222
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.27 E-value=1.5e-10 Score=115.34 Aligned_cols=209 Identities=13% Similarity=-0.005 Sum_probs=121.0
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
.+|.|.+|+...+.+.. ..++... +..+ .....+++++++++.+.+ ..++++||++|+..++.++.+
T Consensus 68 ~~p~v~~A~~~~~~~~~-~~~~~~~--~~~~----~~~~la~~l~~~~~~~~~---~v~~~~gGseA~~~al~~~~~~~~ 137 (460)
T 3gju_A 68 GRQKIADAIATQAKNLA-YYHAYVG--HGTE----ASITLAKMIIDRAPKGMS---RVYFGLSGSDANETNIKLIWYYNN 137 (460)
T ss_dssp CCHHHHHHHHHHHHHHS-CCCCCTT--CCCH----HHHHHHHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-ccccccc--cCCH----HHHHHHHHHHhhCCCCcC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 47899999887665421 1122111 1122 233355678888876553 235567899999999988763
Q ss_pred -----CCCEEEecCCCCCcccccccc-c---ch-hccccCCceEEEEeceec--CCCCCCC--------HHHHHHHhhh-
Q 018300 191 -----PHDRIMGLDLPHGGHLSHGFM-T---PK-RRVSGTSIYFESMPYRLD--ESTGLVD--------YDMLEKTAIL- 249 (358)
Q Consensus 191 -----pGD~Vl~~~~~~ggh~s~~~~-~---~~-~~~~~~g~~~~~~~~~~~--~~~~~iD--------~d~le~~i~~- 249 (358)
++|+|++.++.+.|+...... + .. .........+..++++.. ..+...| +++|++.+..
T Consensus 138 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~ 217 (460)
T 3gju_A 138 VLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE 217 (460)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc
Confidence 568999988765443210000 0 00 000001112333442221 0111122 6888888763
Q ss_pred --cCCeEEEEcCCCC--CCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc
Q 018300 250 --FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG 318 (358)
Q Consensus 250 --~~~klIi~~~s~~--~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G 318 (358)
.++++|++++.+. |...+ +++|+++|++||++||+|++|+ |+...|... ..++ ..|++++| |+|+|
T Consensus 218 ~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pdi~t~s--K~l~g 294 (460)
T 3gju_A 218 GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVT-GFGRLGTMFGSDHYGIKPDLITIA--KGLTS 294 (460)
T ss_dssp CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHHTCCCSEEEEC--GGGTT
T ss_pred CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCCCCCeeeee--hhhcC
Confidence 3567888876442 33343 8999999999999999999987 442223110 0112 45777655 99976
Q ss_pred --CcEEEEEEeCCCCchhHHHHHHh
Q 018300 319 --PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 319 --p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
.+.|++++++ ++.+.+.
T Consensus 295 G~~~lg~v~~~~------~i~~~~~ 313 (460)
T 3gju_A 295 AYAPLSGVIVAD------RVWQVLV 313 (460)
T ss_dssp TSSCCEEEEEEH------HHHHHHH
T ss_pred CCCCeEEEEECH------HHHHHHh
Confidence 6778898887 5666664
No 223
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.24 E-value=7.6e-11 Score=115.82 Aligned_cols=197 Identities=16% Similarity=0.076 Sum_probs=116.8
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHH--hccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA--ILKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~a--ll~p 191 (358)
.+|.|.+++...+.... .+. | -.+ ++...+++++++++ +.+ ..++++||++|+..++.. .+.+
T Consensus 69 ~~p~v~~a~~~~~~~~~--~~~---~--~~~----~~~~l~~~l~~~~~-~~~---~v~~~~~g~ea~~~al~~ar~~~~ 133 (424)
T 2e7u_A 69 AHPKVLARVRETLERGL--TFG---A--PSP----LEVALAKKVKRAYP-FVD---LVRFVNSGTEATMSALRLARGYTG 133 (424)
T ss_dssp TCHHHHHHHHHHHHTCS--CCS---S--CCH----HHHHHHHHHHHHCT-TCC---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCC--CCC---C--CCH----HHHHHHHHHHHhCC-CCC---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 58999999988775421 111 1 122 33345567888885 332 235567889999999885 2344
Q ss_pred CCEEEecCCCCCcccccccccchhc------cccCCce----EEEEeceecCCCCCCCHHHHHHHhhh--cCCeEEEEcC
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRR------VSGTSIY----FESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGA 259 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~------~~~~g~~----~~~~~~~~~~~~~~iD~d~le~~i~~--~~~klIi~~~ 259 (358)
+|+|++.++.+.|+........... ....|.. .+...++ ..|+++|++.++. .++++|++++
T Consensus 134 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ep 207 (424)
T 2e7u_A 134 RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLE------YNDPEGLREVLKRRGEEIAAIIFEP 207 (424)
T ss_dssp CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEEC------TTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCC------CCCHHHHHHHHHhCCCCEEEEEEeC
Confidence 5788887766554321100000000 0001110 0112221 2489999988864 3567888875
Q ss_pred CC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc-CcEEEEEEeCC
Q 018300 260 SA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKD 329 (358)
Q Consensus 260 s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~~ 329 (358)
.+ .|...+ +++|.++ ++||++||+|++|+ |+. .+... ..++ ..|++ |++|+|++ .+.|++++++
T Consensus 208 ~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~-~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~~~~~~- 281 (424)
T 2e7u_A 208 VVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFR-LAFGGATELLGLKPDLV--TLGKILGGGLPAAAYAGRR- 281 (424)
T ss_dssp SBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTT-SSTTHHHHHHTCCCSEE--EECGGGGTTSSCEEEEECH-
T ss_pred CCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccc-cchhHHHHHhCCCcchh--hhhhhhhCCcceEEEEEcH-
Confidence 43 455667 9999999 99999999999998 763 22210 1112 46776 55699864 4789999886
Q ss_pred CCchhHHHHHHhh
Q 018300 330 PVLGVELESAINN 342 (358)
Q Consensus 330 ~~~~~~~~~~i~~ 342 (358)
++.+.+..
T Consensus 282 -----~~~~~~~~ 289 (424)
T 2e7u_A 282 -----EIMEKVAP 289 (424)
T ss_dssp -----HHHTTBTT
T ss_pred -----HHHhhhcc
Confidence 56555543
No 224
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.20 E-value=8.5e-10 Score=110.78 Aligned_cols=209 Identities=13% Similarity=0.013 Sum_probs=121.2
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
.+|.|.+|+...+.. ...+++. .+..+ .....+++++++++.+.+ ..++++||++|+..++..+.+
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~---~~~~~----~~~~la~~l~~~~~~~~~---~v~~~~sGseA~~~Aik~a~~~~~ 139 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPW---YMATS----PAARLAEKIATLTPGDLN---RIFFTTGGSTAVDSALRFSEFYNN 139 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTT---TCBCH----HHHHHHHHHHTTSSTTCC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccC---ccCCH----HHHHHHHHHHhcCCCCcC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 489999999887654 2222221 11223 233355678888865543 245677899999999988753
Q ss_pred -----CCCEEEecCCCCCccccccc-ccchhc----cccCCceEEEEeceecCCCCCCC--------HHHHHHHhhh---
Q 018300 191 -----PHDRIMGLDLPHGGHLSHGF-MTPKRR----VSGTSIYFESMPYRLDESTGLVD--------YDMLEKTAIL--- 249 (358)
Q Consensus 191 -----pGD~Vl~~~~~~ggh~s~~~-~~~~~~----~~~~g~~~~~~~~~~~~~~~~iD--------~d~le~~i~~--- 249 (358)
.+++|++.++.+.|+..-.. .+.... .......+..++++........| +++|++.+..
T Consensus 140 ~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 219 (476)
T 3i5t_A 140 VLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP 219 (476)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG
T ss_pred hcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC
Confidence 36789988876544321000 000000 00000112333332211110112 7888888763
Q ss_pred cCCeEEEEcCCCC--CCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCc-c-C-CCC-CCcEEEEcCcCcCcc-
Q 018300 250 FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-D-PFK-YCDVVTTTTHKSLRG- 318 (358)
Q Consensus 250 ~~~klIi~~~s~~--~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~-~-~-pl~-gaDiv~~S~hK~L~G- 318 (358)
.++++|++++... |...+ +++|+++|+++|++||+|++|+ |+...|.. . . .++ ..|++++| |+|+|
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~-g~gr~G~~~~~~~~~~v~pdi~t~s--K~l~~G 296 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVT-GFGRCGEWFASEKVFGVVPDIITFA--KGVTSG 296 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHTTCCCCSEEEEC--GGGGTT
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccCceeeecccCCCcchhhhh--hhhcCC
Confidence 3467888875432 33333 8999999999999999999987 44333321 1 1 222 46888765 99865
Q ss_pred -CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 319 -PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 319 -p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.+.|++++++ ++.+.+..
T Consensus 297 ~~plg~v~~~~------~i~~~~~~ 315 (476)
T 3i5t_A 297 YVPLGGLAISE------AVLARISG 315 (476)
T ss_dssp SSCCEEEEECH------HHHHTTSG
T ss_pred CcCeEEEEECH------HHHHHHhc
Confidence 5668888876 56666654
No 225
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.20 E-value=2.5e-10 Score=114.63 Aligned_cols=201 Identities=14% Similarity=0.031 Sum_probs=120.8
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--- 190 (358)
.+|.|.+|+...+..-. ..+...+| ..+ .....+++++++++.+.+ ..++++||++|+..++..+..
T Consensus 72 ~~p~v~~A~~~~~~~~~-~~~~~~~~--~~~----~~~~lae~l~~~~~~~~~---~v~~~~sGseA~~~aik~a~~~~~ 141 (472)
T 3hmu_A 72 GRDELAEVAARQMRELP-YYNTFFKT--THV----PAIALAQKLAELAPGDLN---HVFFAGGGSEANDTNIRMVRTYWQ 141 (472)
T ss_dssp CCHHHHHHHHHHHHHCS-CCCSSSSE--ECH----HHHHHHHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-cccccccc--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCHHHHHHHHHHHHHHHHH
Confidence 48999999987765421 12221111 122 223345668888876543 235667899999999988764
Q ss_pred -----CCCEEEecCCCCCcccccccccchhccccCCc-----------eEEEEecee--cCCCCCCC--------HHHHH
Q 018300 191 -----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRL--DESTGLVD--------YDMLE 244 (358)
Q Consensus 191 -----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-----------~~~~~~~~~--~~~~~~iD--------~d~le 244 (358)
++++|++.++.+.|+.. + .....+. .+..++++. +.... .| +++|+
T Consensus 142 ~~g~~~~~~ii~~~~~yHg~t~-~------~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le 213 (472)
T 3hmu_A 142 NKGQPEKTVIISRKNAYHGSTV-A------SSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELE 213 (472)
T ss_dssp HTTCTTCCEEEEETTCCCCSSH-H------HHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEEcCcCCCccH-H------hhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHH
Confidence 46789988765544311 0 1111110 123333222 10011 34 78888
Q ss_pred HHhhh---cCCeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcC
Q 018300 245 KTAIL---FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTT 312 (358)
Q Consensus 245 ~~i~~---~~~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~ 312 (358)
+.++. .++++|++++.+ .|...+ +++|+++|+++|++||+|++|+ |+...|... ..++ ..|++++|
T Consensus 214 ~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gfgr~G~~~a~~~~~v~pdi~t~s- 291 (472)
T 3hmu_A 214 EAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVIC-GFGRTGNWFGTQTMGIRPHIMTIA- 291 (472)
T ss_dssp HHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHHTCCCSEEEEC-
T ss_pred HHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-CCcccCccchhHHhCCCCceeeec-
Confidence 88763 345778887543 234444 8999999999999999999987 443223210 0112 45888765
Q ss_pred cCcCcc--CcEEEEEEeCCCCchhHHHHHHh
Q 018300 313 HKSLRG--PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 313 hK~L~G--p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
|+|+| .+.|++++++ ++.+.++
T Consensus 292 -K~l~gg~~plG~v~~~~------~i~~~~~ 315 (472)
T 3hmu_A 292 -KGLSSGYAPIGGSIVCD------EVAHVIG 315 (472)
T ss_dssp -GGGTTTSSCCEEEEEEH------HHHHHHT
T ss_pred -hhhhcCCcceEEEEECH------HHHHhcc
Confidence 99976 6778888887 6777663
No 226
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.19 E-value=5.1e-10 Score=111.39 Aligned_cols=202 Identities=12% Similarity=0.002 Sum_probs=110.6
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhcc--C
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all~--p 191 (358)
.+|.|.+++...+... . .+....+ ..+ .....+++++++++.+..+ ..++++||++|+..++..... .
T Consensus 78 ~~p~v~~A~~~~~~~~-~-~~~~~~~--~~~----~~~~la~~l~~~~~~~~~~--~v~~~~sGseA~~~Alk~a~~~~g 147 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDF-T-HTCFMVT--PYE----GYVAVCEQLNRLTPVRGDK--RSALFNSGSEAVENAVKIARSHTH 147 (451)
T ss_dssp TCHHHHHHHHHHHTTC-S-CCTTTTS--CCH----HHHHHHHHHHHHSSCCSSE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc-c-cccCCcc--CCH----HHHHHHHHHHHhCCcCCCC--EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 4899999998776432 1 1111111 122 2333566788888754211 245677899999999977643 4
Q ss_pred CCEEEecCCCCCcccccccc-c----ch-hccccCCceEEEEecee---------cCCC-CCCCHHHHHHHhhh----cC
Q 018300 192 HDRIMGLDLPHGGHLSHGFM-T----PK-RRVSGTSIYFESMPYRL---------DEST-GLVDYDMLEKTAIL----FR 251 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~-~----~~-~~~~~~g~~~~~~~~~~---------~~~~-~~iD~d~le~~i~~----~~ 251 (358)
+++|++.+..+.|+...... + .. .........+..++++. +++. +..+++.+++.++. .+
T Consensus 148 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 227 (451)
T 3oks_A 148 KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADN 227 (451)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGG
T ss_pred CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCC
Confidence 58888887665543210000 0 00 00000011233444331 1000 01134444444432 34
Q ss_pred CeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCc-cCcE
Q 018300 252 PKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRG 321 (358)
Q Consensus 252 ~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~-Gp~G 321 (358)
+++|++++.+ .|...+ +++|+++|++||++||+|++|. |+...|... ..++ ..|++++ .|+|. |.+.
T Consensus 228 ~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~t~--sK~l~~G~~i 304 (451)
T 3oks_A 228 LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-GFARTGAMFACEHEGIDPDLIVT--AKGIAGGLPL 304 (451)
T ss_dssp EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTSSC
T ss_pred EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCccccchhhhhcCCCCCeeee--hhhhhCCcce
Confidence 5677776533 233333 9999999999999999999987 543333211 1112 4577755 49984 5577
Q ss_pred EEEEEeC
Q 018300 322 GMIFFKK 328 (358)
Q Consensus 322 G~I~~~~ 328 (358)
|++++++
T Consensus 305 G~v~~~~ 311 (451)
T 3oks_A 305 SAVTGRA 311 (451)
T ss_dssp EEEEEEH
T ss_pred EEEEECH
Confidence 8888876
No 227
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.18 E-value=1.2e-10 Score=115.75 Aligned_cols=191 Identities=10% Similarity=-0.002 Sum_probs=111.4
Q ss_pred CcHHHH-H-HHhh---hhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCCCHHHHHHHHHH
Q 018300 114 TSRAVM-E-AVGS---CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTA 187 (358)
Q Consensus 114 ~s~~V~-~-al~~---~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg-~~~~~~~v~V~~~SGt~A~~~a~~a 187 (358)
.+|.|. + |+.. .+... . +.+.+| ..+... ..+++++++++ .+.+ ..++++||++|+..++..
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~-~--~~~~~~--~~~~~~----~la~~la~~~~~~~~~---~v~~~~~gseA~~~aik~ 138 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALN-K--PSNSDV--YSVAMA----RFVETFARVLGDPALP---HLFFVEGGALAVENALKA 138 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTC-C--CCTTTC--CCHHHH----HHHHHHHHHHCCTTCC---EEEEESSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhc-C--CCCccc--CCHHHH----HHHHHHHHhcCCCCCC---EEEEeCchHHHHHHHHHH
Confidence 488999 8 8887 44322 1 111112 223222 24456888887 3332 235567889999999875
Q ss_pred hc---c-----------CCCEEEecCCCCCcccccccccchhccccCCc------e-----EEEEeceecC--CCC----
Q 018300 188 IL---K-----------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------Y-----FESMPYRLDE--STG---- 236 (358)
Q Consensus 188 ll---~-----------pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------~-----~~~~~~~~~~--~~~---- 236 (358)
+. + +||+|++.++.+.|+.... +...+. . ..+..++.+. ...
T Consensus 139 a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 211 (449)
T 2cjg_A 139 AFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT-------LSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMA 211 (449)
T ss_dssp HHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG-------GGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHH
T ss_pred HHHHhcccccccccccCCCCEEEEECCCcCCcccch-------hhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccc
Confidence 42 2 2899999987665542211 111110 0 0223333331 000
Q ss_pred ---CCCHHHHHHHhhh--cCCeEEEEcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC
Q 018300 237 ---LVDYDMLEKTAIL--FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK 303 (358)
Q Consensus 237 ---~iD~d~le~~i~~--~~~klIi~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~ 303 (358)
..|+++|++.++. .++++|++++.+ .|...+ +++|.++|+++|++|++|++|+ |+...|... ..++
T Consensus 212 ~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~ 290 (449)
T 2cjg_A 212 ALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT-GCGLTGTAWAYQQLD 290 (449)
T ss_dssp HHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSTHHHHT
T ss_pred hhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc-CCCccCcceeecccC
Confidence 2456778888853 357888887643 354455 9999999999999999999998 543333211 1112
Q ss_pred -CCcEEEEcCcCcCccCcEEEEEEeCC
Q 018300 304 -YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (358)
Q Consensus 304 -gaDiv~~S~hK~L~Gp~GG~I~~~~~ 329 (358)
..|++++| |+| | .|+++++++
T Consensus 291 ~~~di~t~s--K~l--~-iG~~~~~~~ 312 (449)
T 2cjg_A 291 VAPDIVAFG--KKT--Q-VCGVMAGRR 312 (449)
T ss_dssp CCCSEEEEC--GGG--S-SEEEEECGG
T ss_pred CCceEEEec--Ccc--c-EEEEEECHH
Confidence 46777654 998 4 566777663
No 228
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.18 E-value=6.3e-10 Score=110.82 Aligned_cols=208 Identities=15% Similarity=0.013 Sum_probs=114.6
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc--cC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--~p 191 (358)
.+|.|.+|+...+.... .+....+ -.+ .....+++++++++.+..+ ..++++||++|+..++.... ..
T Consensus 81 ~~p~v~~A~~~~~~~~~--~~~~~~~--~~~----~~~~la~~l~~~~~~~~~~--~v~~~~sGseA~~~alk~a~~~~g 150 (453)
T 4ffc_A 81 SHPAVAAAIADQATHFT--HTCFMVT--PYE----QYVQVAELLNALTPGDHDK--RTALFNSGAEAVENAIKVARLATG 150 (453)
T ss_dssp TCHHHHHHHHHHHHHCS--CCTTTTS--CCH----HHHHHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhcc--ccccCcC--CCH----HHHHHHHHHHHhCCCCCCc--EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 48999999988765421 1211111 122 2333566788898754211 24567789999999997654 35
Q ss_pred CCEEEecCCCCCcccccccc-c----ch-hccccCCceEEEEeceecCCC-CCCC--------HHHHHHHhhhcCCeEEE
Q 018300 192 HDRIMGLDLPHGGHLSHGFM-T----PK-RRVSGTSIYFESMPYRLDEST-GLVD--------YDMLEKTAILFRPKLII 256 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~-~----~~-~~~~~~g~~~~~~~~~~~~~~-~~iD--------~d~le~~i~~~~~klIi 256 (358)
+++|++.++.+.|+...... + .. .........+..++++....+ ...+ .+.|++.+...++.+|+
T Consensus 151 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi 230 (453)
T 4ffc_A 151 RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAII 230 (453)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 68899887665443210000 0 00 000000112334444321100 0112 35556555433456777
Q ss_pred EcCCC--CCCCCC----HHHHHHHHHHcCCEEEEeccccccccccCCccCCC---C-CCcEEEEcCcCcCc-cCcEEEEE
Q 018300 257 AGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLR-GPRGGMIF 325 (358)
Q Consensus 257 ~~~s~--~~~~~d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl---~-gaDiv~~S~hK~L~-Gp~GG~I~ 325 (358)
+++.+ .|...+ +++|+++|++||++||+|++|. |+...|.. ..+ + ..|++++| |++. |.+.|+++
T Consensus 231 ~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~-~a~~~~~~~pdi~t~s--K~~~~G~~~G~~~ 306 (453)
T 4ffc_A 231 IEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQT-GFARTGAW-FASEHEGIVPDIVTMA--KGIAGGMPLSAVT 306 (453)
T ss_dssp ECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEEEEC--GGGGTTSSCEEEE
T ss_pred EcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCccccc-chhhhcCCCcchHhhh--hhhcCCcCeEEEE
Confidence 76533 233333 8999999999999999999986 44322321 111 1 35777655 9984 56778888
Q ss_pred EeCCCCchhHHHHHHh
Q 018300 326 FKKDPVLGVELESAIN 341 (358)
Q Consensus 326 ~~~~~~~~~~~~~~i~ 341 (358)
+++ ++.+.+.
T Consensus 307 ~~~------~i~~~~~ 316 (453)
T 4ffc_A 307 GRA------ELMDAVY 316 (453)
T ss_dssp EEH------HHHTTSC
T ss_pred ECH------HHHhhhc
Confidence 877 5555444
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.03 E-value=3.3e-09 Score=106.24 Aligned_cols=195 Identities=19% Similarity=0.137 Sum_probs=112.2
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.|.+|+.+.+......+. -+. ++....+++++++..-. ...+++|||+|+..++... ...
T Consensus 104 ~hp~v~~Av~~q~~~~~~~~~-------~~~----~~~~lae~l~~~~p~~~----~v~f~~SGsEA~e~AiklAr~~tg 168 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGINLTG-------HNL----LEGRLARLICERFPQIE----QLRFTNSGTEANLMALTAALHFTG 168 (454)
T ss_dssp CCHHHHHHHHHHHHTCSCCCS-------EES----SHHHHHHHHHHHSTTCS----EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhcCCCccC-------CcH----HHHHHHHHHHHhCCCCC----EEEEeCchHHHHHHHHHHHHhccc
Confidence 479999998877654322111 112 22234455777775322 2356689999999999764 234
Q ss_pred CCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcC--CeEEEEcC--CCCCCCCC
Q 018300 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGA--SAYPRDFD 267 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~--~klIi~~~--s~~~~~~d 267 (358)
.++|+..+-.|.|+.. +... ...-....+....++ .-|.+.+++.++++. ...|++++ .+.|...+
T Consensus 169 r~~ii~~~~~yHG~t~-~~~~---~~~~~~~~~~~~~~p------~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p 238 (454)
T 4ao9_A 169 RRKIVVFSGGYHGGVL-GFGA---RPSPTTVPFDFLVLP------YNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPG 238 (454)
T ss_dssp CCEEEEETTCBCSTTC-BBSS---SBCTTSCCSEEEEEC------TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEEC
T ss_pred CCeEEEEeCCcCCccc-cccc---cccCccCCCCcccCC------CchHHHHHHHHhhcCCceEEEEeccccCCCCccCC
Confidence 5678877644433211 1100 000011112222222 237889998887643 34677764 23444433
Q ss_pred ----HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEcCcCcCcc-CcEEEEEEeCCCCchhHHHHHHh
Q 018300 268 ----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 268 ----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S~hK~L~G-p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
+++|+++|++||++||+|+.|+ |-...+....-++ ..|+++++ |.++| ...|.+.+++ ++.+.++
T Consensus 239 ~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t~g--K~lggG~Piga~~~~~------ei~~~~~ 309 (454)
T 4ao9_A 239 QPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTTLG--KYIGGGMSFGAFGGRA------DVMALFD 309 (454)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECH------HHHGGGC
T ss_pred chhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEEec--cccCCCCcceeeeeHH------HHHHHHh
Confidence 8999999999999999999997 6432211111112 35888665 88854 4557777777 5666554
Q ss_pred h
Q 018300 342 N 342 (358)
Q Consensus 342 ~ 342 (358)
.
T Consensus 310 ~ 310 (454)
T 4ao9_A 310 P 310 (454)
T ss_dssp T
T ss_pred h
Confidence 4
No 230
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.52 E-value=5.5e-11 Score=119.56 Aligned_cols=184 Identities=18% Similarity=0.114 Sum_probs=110.5
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHc-CCCCCCCcceEEeCCCHHHHHHHHHHh--cc
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lf-g~~~~~~~v~V~~~SGt~A~~~a~~al--l~ 190 (358)
.+|.|.+|+...+......+|+ ++ .+...++++++++ +.+. .++++||++|+..++... ..
T Consensus 117 ~~p~V~~Av~~q~~~~~~~~~~-------~~----~~~~Lae~L~~~~p~~~~-----v~~~nSGseA~~~Aik~ar~~t 180 (465)
T 2yky_A 117 SHPVIRAAVERALAVGLNLSTQ-------TE----NEALFAEAVCDRFPSIDL-----VRFTNSGTEANLMALATATAIT 180 (465)
Confidence 3789999987766542211111 12 2233455677888 4432 356789999999998764 34
Q ss_pred CCCEEEecCCCCCcccccccccchhccccCCceEEEEeceecCCCCCCCHHHHHHHhhh--cCCeEEEEcCC--CCCCCC
Q 018300 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGAS--AYPRDF 266 (358)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~--~~~klIi~~~s--~~~~~~ 266 (358)
.+|+|++.+..+.|+.. +... .....|.....+.++ ..|+++|++.++. .++++|++++. +.|...
T Consensus 181 gr~~ii~~~~~yHG~~~-~~~s---g~~~~g~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~ 250 (465)
T 2yky_A 181 GRKTVLAFDGGYHGGLL-NFAS---GHAPTNAPYHVVLGV------YNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVP 250 (465)
Confidence 56899988765544311 1000 000111100122222 2378888888763 36788888653 245444
Q ss_pred C----HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC----CCcEEEEcCcCcCcc-CcEEEEEEeCC
Q 018300 267 D----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLRG-PRGGMIFFKKD 329 (358)
Q Consensus 267 d----l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~----gaDiv~~S~hK~L~G-p~GG~I~~~~~ 329 (358)
+ +++|+++|+++|++||+|++|+ + .. +. ...++ ..|++ |+.|+++| .+.|+++++++
T Consensus 251 ~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~-g~-~~a~~~~gv~pDi~--t~sK~lg~G~piG~v~~~~~ 316 (465)
T 2yky_A 251 AERAFLDLLRAEASRCGALLIFDEVMT-S-RL-SG-GGAQEMLGISADLT--TLGKYIGGGMSFGAFGGRRD 316 (465)
Confidence 4 8999999999999999999998 5 22 21 11122 35665 56799864 56688888874
No 231
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=98.97 E-value=8.4e-10 Score=107.71 Aligned_cols=150 Identities=15% Similarity=0.044 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCCH-HHHHHHHHHhccCCC----EEEecCCCCCcccccccccchhccccCCc
Q 018300 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (358)
Q Consensus 148 ~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt-~A~~~a~~all~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (358)
++++.+.+++. ..|.+... ..+|.+++|+ +|+..++.++++||| +|++.++.|.++.. .+...|.
T Consensus 72 ~lr~aia~~~~-~~g~~~~~-~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~--------~~~~~g~ 141 (391)
T 3bwn_A 72 ELEDAIKDLHG-VVGNAATE-DRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVE--------ETTYVRS 141 (391)
T ss_dssp HHHHHHHHHHH-HHCSBCCS-SSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHH--------HHHTTCB
T ss_pred HHHHHHHHHHH-hcCCCCCC-CCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHH--------HHHHcCC
Confidence 45555444443 33433210 0146666665 599999999999999 99999987766432 2334555
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--CCCHHHHHHHHHHcCCEEEEeccccccccccCCccC
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~--~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~ 300 (358)
.+ ++++++.+ .++ ..++|+|++..++||+ ..+ +|++.++++++++++|++|+.+ . ..
T Consensus 142 ~~--~~~~~d~~--~l~---------~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~----~--~~ 200 (391)
T 3bwn_A 142 GM--YKWEGDAW--GFD---------KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWP----H--YT 200 (391)
T ss_dssp TT--EEEEEEST--TCC---------CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCST----T--TS
T ss_pred eE--EEecCCHH--HcC---------CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCC----C--CC
Confidence 33 34445532 122 1368988777666654 443 4544222233999999998732 1 12
Q ss_pred CCC---CCcEEEEcCcCcC--ccCcEEEEEE-eC
Q 018300 301 PFK---YCDVVTTTTHKSL--RGPRGGMIFF-KK 328 (358)
Q Consensus 301 pl~---gaDiv~~S~hK~L--~Gp~GG~I~~-~~ 328 (358)
++. +.++++.|+||++ +|.|.|+++. ++
T Consensus 201 ~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 234 (391)
T 3bwn_A 201 PITRRQDHDIMLFTFSKITGHAGSRIGWALVKDK 234 (391)
T ss_dssp CCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCH
T ss_pred ccccCCCCeEEEEechhhcCCCccceEEEEecCH
Confidence 222 5679999999986 5778899997 54
No 232
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.94 E-value=4.7e-09 Score=105.26 Aligned_cols=190 Identities=15% Similarity=0.175 Sum_probs=109.5
Q ss_pred CcHHHHHHHhhhhhcc-cCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 114 TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~-~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
.+|.|.+|+...+... +..+ + . ++ .....++++.+.++++++++...+ ..++++||++||..++..+.
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~-~--~-~~-~~~~~~l~~~la~~l~~~~~~~~~---~v~f~~sGseA~~~Aik~a~~~~ 151 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINR-P--A-LG-ILPPENFVEKLRESLLSVAPKGMS---QLITMACGSCSNENAFKTIFMWY 151 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCC-C--C-TT-TSCBTTHHHHHHHTGGGGCCTTCC---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcccccc-c--c-cc-cccHHHHHHHHHHHHHHhCCCCcC---EEEEeCCchhHHHHHHHHHHHHh
Confidence 4899999998764321 1111 1 1 11 111124555555556666644332 24567899999999997763
Q ss_pred ----c------------------CC---CEEEecCCCCCcccccccccchhccccCCce-----------EEEEeceec-
Q 018300 190 ----K------------------PH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD- 232 (358)
Q Consensus 190 ----~------------------pG---D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----------~~~~~~~~~- 232 (358)
+ || |+|++.+..+.|+.. + .....+.. +..++++..
T Consensus 152 ~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~-~------~~~~~g~~~~~~~~~~~~~~~~~~~p~~~ 224 (472)
T 1ohv_A 152 RSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTM-G------CLATTHSKAIHKIDIPSFDWPIAPFPRLK 224 (472)
T ss_dssp HHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSH-H------HHHHCCSCHHHHTTSCCCCCCEECCCCCC
T ss_pred hhhccCcccccccccccccccccccCCCCeEEEECCCcccccH-H------HHhcCCCccccccCCCCCCCcccCCCccc
Confidence 1 56 899998865544321 1 11111110 011122110
Q ss_pred -CCC---------CCCCHHHHHHHhhhc-----CCeEEEEcCC--CCCCCCC----HHHHHHHHHHcCCEEEEecccccc
Q 018300 233 -EST---------GLVDYDMLEKTAILF-----RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 233 -~~~---------~~iD~d~le~~i~~~-----~~klIi~~~s--~~~~~~d----l~~I~~ia~e~g~~livD~Ah~~G 291 (358)
+.. ...|+++|++.++.. ++++|++++. +.|...+ +++|+++|+++|++||+|++|+ |
T Consensus 225 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g 303 (472)
T 1ohv_A 225 YPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQT-G 303 (472)
T ss_dssp SSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTT-T
T ss_pred CccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCccc-C
Confidence 000 023688899888652 6788888653 3465666 9999999999999999999997 4
Q ss_pred ccccCCccCCCC--C----CcEEEEcCcCc-CccCcEEEEE
Q 018300 292 LVAASVVADPFK--Y----CDVVTTTTHKS-LRGPRGGMIF 325 (358)
Q Consensus 292 l~~~g~~~~pl~--g----aDiv~~S~hK~-L~Gp~GG~I~ 325 (358)
+...|.. ..++ + .|++++| |+ ++ ||+++
T Consensus 304 ~g~~g~~-~~~~~~gv~~~~Di~t~s--K~~l~---GG~~~ 338 (472)
T 1ohv_A 304 GGSTGKF-WAHEHWGLDDPADVMTFS--KKMMT---GGFFH 338 (472)
T ss_dssp TTTTSSS-SGGGGGCCSSCCSEEEEC--GGGSS---EEEEE
T ss_pred CCCCCCc-hhccccCCCCCCCEEEEc--ccccc---CCccC
Confidence 3333321 0111 2 7887665 98 55 47776
No 233
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=98.84 E-value=1.3e-09 Score=107.99 Aligned_cols=158 Identities=12% Similarity=0.014 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHcC--CCCCCCcceEEeCCC-HHHHHHHHHHh--------ccCCCEEEecCCCCCcccccccccchh
Q 018300 147 DELETLCQKRALAAFN--LDENKWGVNVQPLSG-SPANFEVYTAI--------LKPHDRIMGLDLPHGGHLSHGFMTPKR 215 (358)
Q Consensus 147 ~~lE~~~~~~la~lfg--~~~~~~~v~V~~~SG-t~A~~~a~~al--------l~pGD~Vl~~~~~~ggh~s~~~~~~~~ 215 (358)
.++++.+++++.+..+ ++++ +|.+++| ++|+..++.++ ++|||+|+++++.|.++..
T Consensus 103 ~~lr~aia~~~~~~~~~~~~~~----~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~-------- 170 (427)
T 2hox_A 103 FELEKTIKELHEVVGNAAAKDR----YIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFRE-------- 170 (427)
T ss_dssp HHHHHHHHHHHHHHTCBCCTTC----EEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHH--------
T ss_pred HHHHHHHHHHHHHhCCcCCCCC----EEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHH--------
Confidence 3567666665555433 3443 4555555 56999999999 9999999999987655422
Q ss_pred ccccCCceEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CCCCHHHHHHHHHHcCCEEEEecccccccc
Q 018300 216 RVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLV 293 (358)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~--~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~ 293 (358)
.+...|..+ +.+ .+|+++|++.+.. ++|+|++..+++| ...+ + +++ ++..++|.++.-..
T Consensus 171 ~~~~~g~~~--~~~-------~~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~- 232 (427)
T 2hox_A 171 QTKYFDKKG--YVW-------AGNAANYVNVSNP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPH- 232 (427)
T ss_dssp HHHHSCBTT--EEE-------EEEGGGGTTCSCG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTT-
T ss_pred HHHHcCCee--eee-------cCCHHHHHHhhcC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCC-
Confidence 223344422 222 3466777776653 6788877666655 4566 3 233 56788898764210
Q ss_pred ccCCccCCCC-CCcEEEEcCcCcC--ccCcEEEEEEeCCCCchhHHHHHHhh
Q 018300 294 AASVVADPFK-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 294 ~~g~~~~pl~-gaDiv~~S~hK~L--~Gp~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
.-...++ +.+++++|+||++ +|.|.|+++++++ ++.+++..
T Consensus 233 ---~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~-----~l~~~l~~ 276 (427)
T 2hox_A 233 ---YTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDE-----SVYNNLLN 276 (427)
T ss_dssp ---TSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCH-----HHHHHHHH
T ss_pred ---CCccccCCCceEEEEeChhcCCCCCceEEEEEECCH-----HHHHHHHH
Confidence 0001222 5789999999986 5677899999543 45555443
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.39 E-value=3.4e-05 Score=77.16 Aligned_cols=201 Identities=16% Similarity=0.059 Sum_probs=102.6
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHh--ccC
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~al--l~p 191 (358)
-+|.|.+|+.+.+.. .... . .+....+. +....+++.+++..+..+ ..++++|||+|+..++... ...
T Consensus 81 ~~p~v~~Ai~~q~~~-~~~~--~-~~~~~~~~----~~~lae~L~~~~p~~~~~--~v~f~~sGsEA~e~AlklAr~~t~ 150 (456)
T 4atq_A 81 SDPAVVAAVQEAAAH-FTHT--C-FMVTPYEG----YVAVTEQLNRLTPGDHAK--RTVLFNSGAEAVENAVKVARLATG 150 (456)
T ss_dssp TCHHHHHHHHHHHHH-CSCC--T-TTTSCCHH----HHHHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhh-ccCc--c-cCccCcHH----HHHHHHHHHHhCCCCCCc--EEEEeCChHHHHHHHHHHHhhhhc
Confidence 478898888766543 2111 1 01111221 112345677787654321 2356789999999999643 334
Q ss_pred CCEEEecCCCCCcccccccc--cchh---cccc--CCceEEEEecee--cCCC-CCCCHHHHHHHh-------hhcCCeE
Q 018300 192 HDRIMGLDLPHGGHLSHGFM--TPKR---RVSG--TSIYFESMPYRL--DEST-GLVDYDMLEKTA-------ILFRPKL 254 (358)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~--~~~~---~~~~--~g~~~~~~~~~~--~~~~-~~iD~d~le~~i-------~~~~~kl 254 (358)
.++|+.....|.|.-. +.. +... .... ....+..++++. .... ...+.+.+++.+ ...++..
T Consensus 151 r~~ii~~~~~yHG~t~-~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAA 229 (456)
T 4atq_A 151 RDAVVAFDHAYHGRTN-LTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAA 229 (456)
T ss_dssp CCEEEEETTCCCCSSH-HHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEE
T ss_pred CCeEEEEecccCCccc-cccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEE
Confidence 5688887644433210 000 0000 0000 001122233322 1111 122333333322 2224566
Q ss_pred EEEcCC--CCCCC----CCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEEcCcCcCcc-CcEEEE
Q 018300 255 IIAGAS--AYPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMI 324 (358)
Q Consensus 255 Ii~~~s--~~~~~----~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~S~hK~L~G-p~GG~I 324 (358)
|++++- +.|.. .-+++++++|++||++||+|+.|+ |+.-.|..- ..++ ..|+++++ |.++| ..-|.+
T Consensus 230 vivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P~~av 306 (456)
T 4atq_A 230 IIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQS-GFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLPLSAI 306 (456)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCEEE
T ss_pred EEeccccCCCCccccchhhhHHHHHHHhhcCCceEeccccc-ccCCccccccccccCCCCchhhhh--hcccCcCCceee
Confidence 777652 22322 238999999999999999999987 543233211 1122 46999877 88744 344667
Q ss_pred EEeC
Q 018300 325 FFKK 328 (358)
Q Consensus 325 ~~~~ 328 (358)
++++
T Consensus 307 ~~~~ 310 (456)
T 4atq_A 307 TGRA 310 (456)
T ss_dssp EEEH
T ss_pred EecH
Confidence 7776
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.00 E-value=5.3e-05 Score=76.07 Aligned_cols=201 Identities=15% Similarity=0.106 Sum_probs=106.1
Q ss_pred CcHHHHHHHhhhhhcccCCCCCCCcCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCCHHHHHHHHHHhc---
Q 018300 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (358)
Q Consensus 114 ~s~~V~~al~~~l~~~~~~G~pg~r~~~G-~~~~~~lE~~~~~~la~lfg~~~~~~~v~V~~~SGt~A~~~a~~all--- 189 (358)
-+|.|.+|+...+..-.. + ..+++. ++ .+....+++.+++..+.+ ...+.+|||+|+..++....
T Consensus 84 ~~p~v~~Ai~~q~~~l~~--~--~~~~~~~~~----~~~~lAe~L~~~~p~~~~---~v~f~~sGsEA~e~AiKlAr~~~ 152 (473)
T 4e3q_A 84 DHKGLIDAAKAQYERFPG--Y--HAFFGRMSD----QTVMLSEKLVEVSPFDSG---RVFYTNSGSEANDTMVKMLWFLH 152 (473)
T ss_dssp CCHHHHHHHHHHHHHCCC--C--CCCTTEEEH----HHHHHHHHHHHHSSCSSC---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--c--cccccccCH----HHHHHHHHHHhhCCCCcc---EEEEeCchHHHHHHHHHHHHHHH
Confidence 478999998776653211 1 011211 22 122245667888765432 23566899999999987532
Q ss_pred ----cCC-CEEEecCCCCCcccccccccchhccccCCc-----------eEEEEece----ecCCCCCC-------CHHH
Q 018300 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYR----LDESTGLV-------DYDM 242 (358)
Q Consensus 190 ----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-----------~~~~~~~~----~~~~~~~i-------D~d~ 242 (358)
+++ .+|+...-.|.|. ... .+...+. .+..++++ ..+ .+.. ..++
T Consensus 153 ~~~g~~~r~~ii~~~~~yHG~-----t~~--a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~ 224 (473)
T 4e3q_A 153 AAEGKPQKRKILTRWNAYHGV-----TAV--SASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGE-EGETEEQFVARLARE 224 (473)
T ss_dssp HHTTCTTCCEEEEETTCCCCS-----SHH--HHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSC-TTCCHHHHHHHHHHH
T ss_pred HhcCCCCcceEEEeeceECCC-----ccc--cccccccccccccCCCCCcccccCCCccccccc-ccchhhHHHHHHHHH
Confidence 233 4677765433331 100 0111110 11222221 111 1111 1234
Q ss_pred HHHHhhhc---CCeEEEEcCC--CCCCC----CCHHHHHHHHHHcCCEEEEeccccccccccCCcc--CCCC-CCcEEEE
Q 018300 243 LEKTAILF---RPKLIIAGAS--AYPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (358)
Q Consensus 243 le~~i~~~---~~klIi~~~s--~~~~~----~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~--~pl~-gaDiv~~ 310 (358)
+++.+... ++..|++++- +.|.. .-+++|+++|+++|++||.|+.++ |+.-.|... .-++ ..|++++
T Consensus 225 l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~t-GfGRtG~~fa~e~~gv~PDi~t~ 303 (473)
T 4e3q_A 225 LEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVIC-GFGRTGNTWGCVTYDFTPDAIIS 303 (473)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTT-SSSTTSSSCHHHHTTCCCSEEEE
T ss_pred HHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccc-cCCcccchhHHHhcCCCCChHHh
Confidence 55555432 2446676642 23332 228999999999999999999987 542223211 1122 4689876
Q ss_pred cCcCcCcc--CcEEEEEEeCCCCchhHHHHHHhh
Q 018300 311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINN 342 (358)
Q Consensus 311 S~hK~L~G--p~GG~I~~~~~~~~~~~~~~~i~~ 342 (358)
+ |.|.| ..-|.+++++ ++.+.+..
T Consensus 304 ~--K~l~gG~~Pl~av~~~~------~i~~~~~~ 329 (473)
T 4e3q_A 304 S--KNLTAGFFPMGAVILGP------ELSKRLET 329 (473)
T ss_dssp C--GGGGTTSSCCEEEEECH------HHHHHHHH
T ss_pred c--ccccCCCCCcccccccH------HHHHHhcc
Confidence 6 98854 4567777776 56666644
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.86 E-value=0.00018 Score=76.98 Aligned_cols=91 Identities=12% Similarity=0.038 Sum_probs=56.7
Q ss_pred HHHHHHhhh-------cCCeEEEEcCC--CC-CCCC-C---HHHHHHHHHHcCCEEEEeccccccccccCCccCCCC---
Q 018300 241 DMLEKTAIL-------FRPKLIIAGAS--AY-PRDF-D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--- 303 (358)
Q Consensus 241 d~le~~i~~-------~~~klIi~~~s--~~-~~~~-d---l~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~--- 303 (358)
++|++.++. .++.+|++++. .. |... + +++|+++|++||++||+|++|. |+.-.|... ..+
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~t-GfGRtG~~f-a~e~~g 654 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFT-GFWRLGVET-TTELLG 654 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTT-TTTTTSBSS-THHHHS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCcc-ccccCCCch-hhHhcC
Confidence 567776642 23457777653 22 3322 2 8999999999999999999976 443233211 111
Q ss_pred -CCcEEEEcCcCcCcc--CcEEEEEEeCCCCchhHHHHHHh
Q 018300 304 -YCDVVTTTTHKSLRG--PRGGMIFFKKDPVLGVELESAIN 341 (358)
Q Consensus 304 -gaDiv~~S~hK~L~G--p~GG~I~~~~~~~~~~~~~~~i~ 341 (358)
..|+++ +.|.|+| .+-|++++++ ++.+.+.
T Consensus 655 v~PDiit--lsK~L~gG~~Plgav~~~~------~i~~~~~ 687 (831)
T 4a0g_A 655 CKPDIAC--FAKLLTGGMVPLAVTLATD------AVFDSFS 687 (831)
T ss_dssp SCCSEEE--ECGGGGTTSSCCEEEEECH------HHHHTTC
T ss_pred CCCcEEE--EecccccCccCcEEEEECH------HHHHHHh
Confidence 358875 5599965 2557888877 5655443
No 237
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=49.05 E-value=25 Score=31.85 Aligned_cols=58 Identities=16% Similarity=0.207 Sum_probs=41.5
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEEc----C-CCCCC-CCCHHHHHHHHHHcCCEEEEeccccccc
Q 018300 235 TGL-VDYDMLEKTAIL----FRPKLIIAG----A-SAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 292 (358)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~~klIi~~----~-s~~~~-~~dl~~I~~ia~e~g~~livD~Ah~~Gl 292 (358)
++. .+++++...++. ..++++++. . ++|+. ..|+..+..+.+..+.+++.|.+|+.|.
T Consensus 137 ~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 137 RGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 454 478887766532 235677664 2 45653 5788899888888899999999999775
No 238
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=47.17 E-value=27 Score=31.89 Aligned_cols=58 Identities=14% Similarity=0.190 Sum_probs=41.0
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEEc--CCCC---C-CCCCHHHHHHHHHHcCCEEEEeccccccc
Q 018300 235 TGL-VDYDMLEKTAIL----FRPKLIIAG--ASAY---P-RDFDYPRMRQIADAVGALLMMDMAHISGL 292 (358)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~~klIi~~--~s~~---~-~~~dl~~I~~ia~e~g~~livD~Ah~~Gl 292 (358)
+|. .++++++..++. ..++++++. .+.| + ...|+..|..+.+..+.+|+.|.+|+.|.
T Consensus 152 ~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~ 220 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGR 220 (276)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCc
Confidence 565 488887765532 245777764 2233 3 36789989888888899999999999773
No 239
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=44.45 E-value=8.2 Score=37.30 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=25.0
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||+|..
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4577778999999999999999999985
No 240
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=44.05 E-value=24 Score=33.50 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=40.7
Q ss_pred CCC-CCHHHHHHHhh----hcCCeEEEEc-----CCCC-CCCCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 235 TGL-VDYDMLEKTAI----LFRPKLIIAG-----ASAY-PRDFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 235 ~~~-iD~d~le~~i~----~~~~klIi~~-----~s~~-~~~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
+|. .+++++...++ ...++++++. +++| ....|+..|..+.+..+.+++.|.+|+.|
T Consensus 220 ~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 220 RGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 565 47777766553 2245777772 3334 34678999988888889999999999977
No 241
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=44.01 E-value=25 Score=33.85 Aligned_cols=57 Identities=19% Similarity=0.318 Sum_probs=41.8
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEEc--CCCCCC----CCCHHHHHHHHHHcCCEEEEecccccc
Q 018300 235 TGL-VDYDMLEKTAIL----FRPKLIIAG--ASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG 291 (358)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~~klIi~~--~s~~~~----~~dl~~I~~ia~e~g~~livD~Ah~~G 291 (358)
+|. .++++++..++. ...+++++. .+.|+. ..|+..|..+.+..+.+|++|.+|+.|
T Consensus 256 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 256 RGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 555 788887665532 245777774 455653 478999988888899999999999866
No 242
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=42.69 E-value=41 Score=32.29 Aligned_cols=88 Identities=15% Similarity=0.120 Sum_probs=58.6
Q ss_pred CCCCCHHHHHHHhh---hc-CCeEEEEc-CCCCCC---CCCHHHHHHHHHHc-CCEEEEecccccc-ccccCCccCCCC-
Q 018300 235 TGLVDYDMLEKTAI---LF-RPKLIIAG-ASAYPR---DFDYPRMRQIADAV-GALLMMDMAHISG-LVAASVVADPFK- 303 (358)
Q Consensus 235 ~~~iD~d~le~~i~---~~-~~klIi~~-~s~~~~---~~dl~~I~~ia~e~-g~~livD~Ah~~G-l~~~g~~~~pl~- 303 (358)
+|.-++++++..++ .. ..+++++. .+.||. ..|+..|..+.+.+ ++++ .|..|..| .... --.+.
T Consensus 165 tGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~~~~~---~AAvAl 240 (385)
T 1vli_A 165 TAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHPTEAP---CAAVRL 240 (385)
T ss_dssp CTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSSSSHHH---HHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCchHHH---HHHHHc
Confidence 55557777776553 22 24777764 455764 57899999999999 8887 78999988 3210 00112
Q ss_pred CCcEE--EEcCcCcCccCcEEEEEE
Q 018300 304 YCDVV--TTTTHKSLRGPRGGMIFF 326 (358)
Q Consensus 304 gaDiv--~~S~hK~L~Gp~GG~I~~ 326 (358)
|||++ -++..|++.||.+..=+.
T Consensus 241 GA~iIEkHftldra~~G~D~~~SL~ 265 (385)
T 1vli_A 241 GAKLIEKHFTIDKNLPGADHSFALN 265 (385)
T ss_dssp TCSEEEEEBCSCTTSSCSSCTTSBC
T ss_pred CCCEEEeCCCccccCCCCchhhhCC
Confidence 88966 578899999887644333
No 243
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=41.31 E-value=40 Score=26.69 Aligned_cols=30 Identities=13% Similarity=0.422 Sum_probs=22.6
Q ss_pred EEEEcCCCCCCCCCHHHHHHHHHHcCCEEE
Q 018300 254 LIIAGASAYPRDFDYPRMRQIADAVGALLM 283 (358)
Q Consensus 254 lIi~~~s~~~~~~dl~~I~~ia~e~g~~li 283 (358)
-|+++.+......|+.+|.++++++|+.++
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred cEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 455554444345799999999999999885
No 244
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=38.33 E-value=14 Score=35.77 Aligned_cols=28 Identities=14% Similarity=0.376 Sum_probs=23.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3456667899999999999999999985
No 245
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=37.94 E-value=54 Score=29.69 Aligned_cols=60 Identities=10% Similarity=0.161 Sum_probs=43.0
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC---CCCCHHHHHHHHHHcC----CEEEEecc
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP---RDFDYPRMRQIADAVG----ALLMMDMA 287 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~---~~~dl~~I~~ia~e~g----~~livD~A 287 (358)
.++++.++. .+..+++.+.+.+.++++|.++..... ....+.++.+..++.| +++++=++
T Consensus 157 G~eVi~LG~-----~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 157 MIDAYNLGS-----QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp TEEEEECCS-----SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred CcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 467776543 467889888888889999988776665 4445677787777766 77777554
No 246
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=37.30 E-value=14 Score=36.33 Aligned_cols=27 Identities=19% Similarity=0.201 Sum_probs=23.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++-||+.|+.||.|..
T Consensus 75 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 75 QYGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 456667899999999999999999985
No 247
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=37.02 E-value=14 Score=36.06 Aligned_cols=28 Identities=7% Similarity=0.036 Sum_probs=24.7
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++.||++|+.||.|..
T Consensus 73 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 73 TKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4567788999999999999999999984
No 248
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=36.15 E-value=15 Score=35.92 Aligned_cols=28 Identities=11% Similarity=0.063 Sum_probs=24.7
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 77 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 77 TKYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4567778999999999999999999984
No 249
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=35.94 E-value=13 Score=36.04 Aligned_cols=28 Identities=18% Similarity=0.129 Sum_probs=24.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 59 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3567778999999999999999999984
No 250
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=35.93 E-value=41 Score=31.83 Aligned_cols=90 Identities=16% Similarity=0.143 Sum_probs=59.5
Q ss_pred CCCCCHHHHHHHhh---hcCCeEEEEc-CCCCCC---CCCHHHHHHHHHHc-CCEEEEeccccccccccCCccCCCC-CC
Q 018300 235 TGLVDYDMLEKTAI---LFRPKLIIAG-ASAYPR---DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YC 305 (358)
Q Consensus 235 ~~~iD~d~le~~i~---~~~~klIi~~-~s~~~~---~~dl~~I~~ia~e~-g~~livD~Ah~~Gl~~~g~~~~pl~-ga 305 (358)
+|.-++++++..++ ....+++++. .+.||. ..|+..|..+.+.+ +.++ .|..|+.|.... --.+. ||
T Consensus 155 tGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpV-g~sdHt~G~~~~---~AAvAlGA 230 (349)
T 2wqp_A 155 TGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAII-GLSDHTLDNYAC---LGAVALGG 230 (349)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEE-EEECCSSSSHHH---HHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCE-EeCCCCCcHHHH---HHHHHhCC
Confidence 56557787766553 2223777764 455764 57899999999999 8887 589999883210 01122 89
Q ss_pred cEE--EEcCcCcCccCcEEEEEEeC
Q 018300 306 DVV--TTTTHKSLRGPRGGMIFFKK 328 (358)
Q Consensus 306 Div--~~S~hK~L~Gp~GG~I~~~~ 328 (358)
|++ -++..|++.||.+..=+..+
T Consensus 231 ~iIEkH~tld~a~~G~D~~~SL~p~ 255 (349)
T 2wqp_A 231 SILERHFTDRMDRPGPDIVCSMNPD 255 (349)
T ss_dssp CEEEEEBCSCTTCCSTTGGGCBCHH
T ss_pred CEEEeCCCccccCCCCChhhhCCHH
Confidence 966 57889999888764444333
No 251
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=35.53 E-value=16 Score=35.74 Aligned_cols=28 Identities=11% Similarity=0.044 Sum_probs=24.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 75 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 75 TKYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3467778999999999999999999984
No 252
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=35.09 E-value=46 Score=28.52 Aligned_cols=59 Identities=10% Similarity=0.102 Sum_probs=41.7
Q ss_pred EEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcC----CEEEEecc
Q 018300 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDMA 287 (358)
Q Consensus 224 ~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g----~~livD~A 287 (358)
++++.++. .+..+++.+.+...+|++|.++.........++++.+..++.+ +++++=++
T Consensus 117 ~~v~~LG~-----~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 117 FTVYNLGV-----DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp CEEEECCS-----SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 56665432 4677888888877899999887655555556788888787765 77777554
No 253
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=34.56 E-value=17 Score=36.07 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=24.9
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++.||++|+.||.|..
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4567788999999999999999999984
No 254
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=34.44 E-value=39 Score=27.94 Aligned_cols=58 Identities=12% Similarity=0.004 Sum_probs=40.4
Q ss_pred EEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcC---CEEEEec
Q 018300 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG---ALLMMDM 286 (358)
Q Consensus 224 ~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g---~~livD~ 286 (358)
++++.++. ...++++.+.+.+.+|++|.++.........++++.+..++.| +.+++=+
T Consensus 47 ~eVi~lG~-----~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG 107 (161)
T 2yxb_A 47 FEVVYTGL-----RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGG 107 (161)
T ss_dssp CEEECCCS-----BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred CEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 46655332 3578888888888899999887665555556788888887764 5565543
No 255
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=34.20 E-value=18 Score=34.63 Aligned_cols=28 Identities=14% Similarity=0.207 Sum_probs=24.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567778899999999999999999984
No 256
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=34.19 E-value=17 Score=35.42 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=23.8
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3456667899999999999999999984
No 257
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=33.85 E-value=18 Score=35.07 Aligned_cols=28 Identities=21% Similarity=0.319 Sum_probs=24.8
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567778999999999999999999984
No 258
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=32.36 E-value=99 Score=26.88 Aligned_cols=65 Identities=14% Similarity=0.131 Sum_probs=44.9
Q ss_pred hhcccccccCCCCcHHHHHHHhhhhhcccCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q 018300 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN 166 (358)
Q Consensus 102 ~~~i~lias~n~~s~~V~~al~~~l~~~~~~G~pg~r~~~G~~~~~~lE~~~~~~la~lfg~~~~ 166 (358)
++.+.+.|.+.+.++..++-|..--...+.--.|...+|...+.++++..-...|+.+.||.+++
T Consensus 131 ~~plvl~Paem~~~~~~~~Nm~~L~~~G~~iipp~~g~ya~p~~iediv~~vv~r~ld~lgi~~~ 195 (209)
T 3zqu_A 131 RRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFYHQPQSVEDLVDFVVARILNTLGIPQD 195 (209)
T ss_dssp TCCEEEEECCSSCCHHHHHHHHHHHHHTCEECCSCCCCTTCCCSHHHHHHHHHHHHHHHHTCCCS
T ss_pred CCcEEEEEcccccCHHHHHHHHHHHHCCCEEeCCCcccccCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 46677778999999999988864322222111222236666677888888888899999999863
No 259
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=32.20 E-value=23 Score=26.30 Aligned_cols=20 Identities=10% Similarity=0.185 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018300 268 YPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~A 287 (358)
-++|+++|+++|++++.|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 36899999999999999974
No 260
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=32.09 E-value=19 Score=35.80 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=24.9
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5577788999999999999999999984
No 261
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=31.30 E-value=1.1e+02 Score=24.21 Aligned_cols=50 Identities=6% Similarity=-0.134 Sum_probs=37.1
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.++.++++.+++. +|.+++++.-.......-+++.+..+++|+-+-+-.+
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T 97 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQT 97 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECH
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCH
Confidence 5888999998764 7999999865555542347788888999988766544
No 262
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=31.09 E-value=19 Score=35.22 Aligned_cols=28 Identities=21% Similarity=0.315 Sum_probs=24.0
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++.||++|+.||.|..
T Consensus 92 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 92 SNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4556667899999999999999999985
No 263
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=30.77 E-value=16 Score=35.68 Aligned_cols=27 Identities=19% Similarity=0.369 Sum_probs=23.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++-||+.|+.||.|..
T Consensus 77 ~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 77 DYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 456677899999999999999999985
No 264
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=30.59 E-value=1.2e+02 Score=26.61 Aligned_cols=66 Identities=18% Similarity=0.072 Sum_probs=43.4
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEc
Q 018300 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT 311 (358)
Q Consensus 239 D~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S 311 (358)
+++++++.+. ...+.|+++.........++++.+.+++.|..+++|.. ..... ....+ |+|++..+
T Consensus 90 ~~~~i~~~~~-aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~-t~eea-----~~a~~~Gad~Ig~~ 156 (229)
T 3q58_A 90 YLQDVDALAQ-AGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS-TVNEG-----ISCHQKGIEFIGTT 156 (229)
T ss_dssp SHHHHHHHHH-HTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS-SHHHH-----HHHHHTTCSEEECT
T ss_pred cHHHHHHHHH-cCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC-CHHHH-----HHHHhCCCCEEEec
Confidence 3466766654 36788887765543446789999999999999999863 32211 01112 88988654
No 265
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=30.18 E-value=1.2e+02 Score=26.58 Aligned_cols=66 Identities=17% Similarity=0.040 Sum_probs=43.2
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEeccccccccccCCccCCCC-CCcEEEEc
Q 018300 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT 311 (358)
Q Consensus 239 D~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~Ah~~Gl~~~g~~~~pl~-gaDiv~~S 311 (358)
+++++++.+. ...+.|+++.........++++.+.+++.|..+++|.. ..... ....+ |+|++..+
T Consensus 90 ~~~~i~~~~~-~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~-t~eea-----~~a~~~Gad~Ig~~ 156 (232)
T 3igs_A 90 FLDDVDALAQ-AGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS-SVDDG-----LACQRLGADIIGTT 156 (232)
T ss_dssp SHHHHHHHHH-HTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC-SHHHH-----HHHHHTTCSEEECT
T ss_pred cHHHHHHHHH-cCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC-CHHHH-----HHHHhCCCCEEEEc
Confidence 3566776654 36778877765433446789999999999999999863 32211 01112 88988644
No 266
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=30.18 E-value=17 Score=35.06 Aligned_cols=28 Identities=14% Similarity=0.285 Sum_probs=22.8
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 76 p~~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 76 PNFGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3466677888999999999999999974
No 267
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=29.54 E-value=23 Score=35.46 Aligned_cols=27 Identities=26% Similarity=0.347 Sum_probs=22.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++.||++|+.||.|..
T Consensus 75 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 75 EYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 456667889999999999999999985
No 268
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=28.96 E-value=23 Score=36.45 Aligned_cols=28 Identities=11% Similarity=0.170 Sum_probs=24.2
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3566677899999999999999999984
No 269
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=28.95 E-value=18 Score=35.25 Aligned_cols=27 Identities=15% Similarity=0.197 Sum_probs=22.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++-||++|+.||.|..
T Consensus 92 ~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 92 ILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345566888999999999999999984
No 270
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=28.86 E-value=23 Score=36.38 Aligned_cols=28 Identities=25% Similarity=0.388 Sum_probs=24.3
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 106 p~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 106 PFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4567777899999999999999999984
No 271
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=28.86 E-value=24 Score=35.76 Aligned_cols=27 Identities=26% Similarity=0.364 Sum_probs=23.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++-||++|+.||.|..
T Consensus 194 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 194 RYGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 456666899999999999999999985
No 272
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=28.24 E-value=24 Score=36.30 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=24.4
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 110 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 110 PAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4567778899999999999999999984
No 273
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=27.75 E-value=17 Score=35.56 Aligned_cols=27 Identities=11% Similarity=0.231 Sum_probs=23.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++-||++|+.||.|..
T Consensus 70 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 70 RSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp TTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 466677899999999999999999984
No 274
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=27.66 E-value=25 Score=36.15 Aligned_cols=28 Identities=18% Similarity=0.256 Sum_probs=24.4
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4567778899999999999999999984
No 275
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=26.57 E-value=33 Score=26.09 Aligned_cols=20 Identities=25% Similarity=0.302 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018300 268 YPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~A 287 (358)
-.+|+++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEECHH
Confidence 36899999999999999974
No 276
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=26.39 E-value=17 Score=35.52 Aligned_cols=26 Identities=8% Similarity=0.087 Sum_probs=21.5
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+|+..|++++++-||++|+.||.|..
T Consensus 99 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 99 LGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp GTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 44456888999999999999999984
No 277
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=26.34 E-value=46 Score=26.61 Aligned_cols=58 Identities=22% Similarity=0.295 Sum_probs=38.4
Q ss_pred EEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcC---CEEEEec
Q 018300 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG---ALLMMDM 286 (358)
Q Consensus 224 ~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g---~~livD~ 286 (358)
|+++.++. ...++++.+.+.+.++++|.++.........++++.+..++.| +.+++=+
T Consensus 32 ~~Vi~lG~-----~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 32 FNVVNIGV-----LSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp CEEEEEEE-----EECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred CEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 56666443 3567888888877799999887665544445666776666654 5566544
No 278
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=26.30 E-value=28 Score=35.16 Aligned_cols=27 Identities=15% Similarity=0.278 Sum_probs=22.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++.||++|+.||.|..
T Consensus 83 ~~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 83 TYGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 455666789999999999999999985
No 279
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=26.12 E-value=28 Score=35.03 Aligned_cols=28 Identities=11% Similarity=0.160 Sum_probs=23.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||+.|+.||.|..
T Consensus 217 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 217 PHFGDKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3456667899999999999999999984
No 280
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=25.89 E-value=22 Score=34.33 Aligned_cols=26 Identities=23% Similarity=0.437 Sum_probs=22.6
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+|...|++++++.|+++|+.||+|..
T Consensus 80 ~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 80 YGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 45566899999999999999999985
No 281
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=25.55 E-value=22 Score=35.69 Aligned_cols=26 Identities=19% Similarity=0.232 Sum_probs=21.8
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+|+..|++++++-||+.|+.||.|..
T Consensus 89 ~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 89 YGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45566789999999999999999984
No 282
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=25.42 E-value=1.5e+02 Score=23.08 Aligned_cols=49 Identities=10% Similarity=0.138 Sum_probs=32.3
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCCCC-HHHHHHHHHHcCCEEEE-ecccccc
Q 018300 241 DMLEKTAILFRPKLIIAGASAYPRDFD-YPRMRQIADAVGALLMM-DMAHISG 291 (358)
Q Consensus 241 d~le~~i~~~~~klIi~~~s~~~~~~d-l~~I~~ia~e~g~~liv-D~Ah~~G 291 (358)
.++.+.++..+.++|++.....+ .+ ...|..+|+++|++++. +.-.-+|
T Consensus 26 ~~v~kai~~gkakLViiA~D~~~--~~~~~~l~~lc~~~~VP~~~v~sk~eLG 76 (121)
T 2lbw_A 26 KEVVKALRKGEKGLVVIAGDIWP--ADVISHIPVLCEDHSVPYIFIPSKQDLG 76 (121)
T ss_dssp HHHHHHHHHSCCCEEEECTTCSC--TTHHHHHHHHHHHTCCCEEECCCHHHHH
T ss_pred HHHHHHHHcCCceEEEEeCCCCH--HHHHHHHHHHHHhcCCcEEEECCHHHHH
Confidence 55666677678899888543222 34 66788999999999854 4333344
No 283
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=25.40 E-value=33 Score=26.31 Aligned_cols=20 Identities=20% Similarity=0.278 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018300 268 YPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~A 287 (358)
-++|+++|+++|++++.|-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 36899999999999999975
No 284
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=24.92 E-value=34 Score=26.28 Aligned_cols=20 Identities=25% Similarity=0.426 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 018300 268 YPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 268 l~~I~~ia~e~g~~livD~A 287 (358)
-.+|+++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCeecCHH
Confidence 36899999999999999974
No 285
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=24.78 E-value=28 Score=35.03 Aligned_cols=28 Identities=14% Similarity=0.235 Sum_probs=23.3
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||+.|+.||.|..
T Consensus 214 ~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 214 PQFGDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3456667899999999999999999974
No 286
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=24.78 E-value=23 Score=35.38 Aligned_cols=27 Identities=19% Similarity=0.242 Sum_probs=22.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++-||++|+.||.|..
T Consensus 74 ~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 74 EFGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 345566889999999999999999984
No 287
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=24.59 E-value=27 Score=35.45 Aligned_cols=28 Identities=7% Similarity=0.039 Sum_probs=24.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 203 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 203 TKYGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3467778899999999999999999984
No 288
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=24.34 E-value=24 Score=36.03 Aligned_cols=26 Identities=8% Similarity=0.055 Sum_probs=22.2
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+|+..|++++++-||+.|+.||.|..
T Consensus 282 ~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 282 LGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 34456799999999999999999985
No 289
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=24.31 E-value=22 Score=34.05 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=22.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++.||++|+.||.|..
T Consensus 70 ~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 70 YLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp TTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 356667889999999999999999984
No 290
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=23.67 E-value=33 Score=34.95 Aligned_cols=28 Identities=14% Similarity=0.061 Sum_probs=24.2
Q ss_pred CCCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 260 s~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+.+|+..|++++++-||++|+.||.|..
T Consensus 157 p~~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 157 PALGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3466777899999999999999999984
No 291
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=23.65 E-value=63 Score=23.53 Aligned_cols=45 Identities=16% Similarity=0.037 Sum_probs=30.6
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 240 ~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
..+..+.++..+.++|++.....+ .-.+.|..+|++++++++.-.
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKDADP--ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETTSCH--HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCH--HHHHHHHHHHHHcCCCEEEEC
Confidence 356667777667888887543222 125678889999999887643
No 292
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=23.26 E-value=78 Score=29.74 Aligned_cols=50 Identities=8% Similarity=-0.059 Sum_probs=40.3
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
..+.+++++.++....++|.+.....|......+++++|+++|+.++.=+
T Consensus 246 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 246 VTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp CCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee
Confidence 45778888887765678888887777777778899999999999888763
No 293
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=22.83 E-value=26 Score=34.95 Aligned_cols=26 Identities=15% Similarity=0.284 Sum_probs=21.4
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+|+..|++++++.||++|+.||.|..
T Consensus 75 ~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 75 FGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45556788899999999999999984
No 294
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=22.73 E-value=24 Score=35.12 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=20.9
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 262 ~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+|+..|++++++-||++|+.||.|..
T Consensus 75 ~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 75 FGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp GCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 44556788888889999999999974
No 295
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=22.47 E-value=1e+02 Score=29.07 Aligned_cols=50 Identities=10% Similarity=-0.056 Sum_probs=39.6
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
..+.+++++.++....++|.+.....|......+++++|+++|+.++.=+
T Consensus 254 ~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 303 (383)
T 3i4k_A 254 VWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGAT 303 (383)
T ss_dssp CSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 45677777777655578888887777777788899999999999998643
No 296
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=22.13 E-value=30 Score=34.80 Aligned_cols=27 Identities=7% Similarity=0.244 Sum_probs=22.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 261 ~~~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
.+|+..|++++++-||+.|+.||.|..
T Consensus 214 ~~Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 214 QFGDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp TTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 455566899999999999999999984
No 297
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=21.78 E-value=1.1e+02 Score=27.04 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=40.5
Q ss_pred EEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcC--CEEEEec
Q 018300 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMDM 286 (358)
Q Consensus 224 ~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g--~~livD~ 286 (358)
++++.++.+ +..+++.+.+...+|++|.++....+....++++.+..++.| +.+++=+
T Consensus 152 ~~Vi~LG~~-----vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG 211 (258)
T 2i2x_B 152 YNVVDLGRD-----VPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGG 211 (258)
T ss_dssp CEEEEEEEE-----CCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEES
T ss_pred CEEEECCCC-----CCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEEC
Confidence 566665443 356888777777799999887766666667888888887765 5666544
No 298
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=21.69 E-value=75 Score=27.55 Aligned_cols=59 Identities=8% Similarity=-0.023 Sum_probs=41.5
Q ss_pred eEEEEeceecCCCCCCCHHHHHHHhhhcCCeEEEE--cCCCCCCCCCHHHHHHHHHHcC----CEEEEec
Q 018300 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA--GASAYPRDFDYPRMRQIADAVG----ALLMMDM 286 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~iD~d~le~~i~~~~~klIi~--~~s~~~~~~dl~~I~~ia~e~g----~~livD~ 286 (358)
.++++.++. .+.++++.+.+.+.+|++|.+ +....+....++++.+..++.| +.+++=+
T Consensus 120 G~~Vi~LG~-----~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG 184 (215)
T 3ezx_A 120 GFQIVDLGV-----DVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGG 184 (215)
T ss_dssp SCEEEECCS-----SCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEES
T ss_pred CCeEEEcCC-----CCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 357776543 457889887788889999988 6544445556888888888875 5666644
No 299
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=21.29 E-value=30 Score=35.72 Aligned_cols=25 Identities=12% Similarity=0.258 Sum_probs=21.7
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEecc
Q 018300 263 PRDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 263 ~~~~dl~~I~~ia~e~g~~livD~A 287 (358)
|+..|++++++-||++|+.||.|..
T Consensus 309 Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 309 GTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEecc
Confidence 4456789999999999999999985
No 300
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=20.76 E-value=95 Score=28.93 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=36.3
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEE
Q 018300 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 284 (358)
Q Consensus 237 ~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~liv 284 (358)
..+.+++++.+.....++|.+...-.|......+++++|+++|+.+++
T Consensus 242 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 289 (368)
T 1sjd_A 242 IVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWC 289 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEe
Confidence 346677777776555677877776677777788999999999999655
No 301
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=20.42 E-value=98 Score=29.04 Aligned_cols=51 Identities=6% Similarity=-0.143 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCCCCHHHHHHHHHHcCCEEEEec
Q 018300 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (358)
Q Consensus 236 ~~iD~d~le~~i~~~~~klIi~~~s~~~~~~dl~~I~~ia~e~g~~livD~ 286 (358)
...+.+++++.+.....++|.+.....|......+++++|+++|+.++.-+
T Consensus 243 ~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 293 (368)
T 3q45_A 243 SCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGG 293 (368)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 356788888888765678898888878877788999999999999998754
No 302
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=20.01 E-value=44 Score=34.66 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=20.8
Q ss_pred CCCCHHHHHHHHHHcCCEEEEecc
Q 018300 264 RDFDYPRMRQIADAVGALLMMDMA 287 (358)
Q Consensus 264 ~~~dl~~I~~ia~e~g~~livD~A 287 (358)
+..|++++++-|+++|+.||.|.+
T Consensus 319 t~edfk~LV~~aH~~GI~VilD~V 342 (695)
T 3zss_A 319 TLDDFDHFVTEAGKLGLEIALDFA 342 (695)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEee
Confidence 345689999999999999999986
Done!