Query 018301
Match_columns 358
No_of_seqs 195 out of 401
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 13:06:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018301.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018301hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n1s_A HIT-like protein HINT; 99.2 1.6E-11 5.4E-16 102.7 6.9 94 120-218 3-110 (119)
2 3ano_A AP-4-A phosphorylase; d 99.2 1.6E-11 5.3E-16 113.6 6.8 91 120-213 69-173 (218)
3 4egu_A Histidine triad (HIT) p 99.2 2.1E-11 7.3E-16 101.4 6.7 91 119-213 3-107 (119)
4 3oj7_A Putative histidine tria 99.2 3.5E-11 1.2E-15 99.9 7.1 89 121-213 8-108 (117)
5 3r6f_A HIT family protein; str 99.2 3.6E-11 1.2E-15 102.5 6.8 88 119-213 5-100 (135)
6 3o1c_A Histidine triad nucleot 99.2 3.1E-11 1E-15 101.8 6.2 96 118-218 13-121 (126)
7 1xqu_A HIT family hydrolase; p 99.1 1.2E-10 4.2E-15 101.2 7.0 91 119-213 34-138 (147)
8 3o0m_A HIT family protein; ssg 99.0 3.9E-10 1.3E-14 97.7 7.9 90 119-213 4-108 (149)
9 3l7x_A SMU.412C, putative HIT- 99.0 3.7E-10 1.3E-14 100.7 7.1 91 118-213 34-138 (173)
10 3lb5_A HIT-like protein involv 99.0 4.9E-10 1.7E-14 98.7 7.7 90 119-213 27-130 (161)
11 2eo4_A 150AA long hypothetical 99.0 3.7E-10 1.2E-14 97.6 6.6 88 122-213 1-101 (149)
12 1y23_A HIT, histidine triad pr 99.0 4.6E-10 1.6E-14 96.2 6.6 91 119-213 4-107 (145)
13 3imi_A HIT family protein; str 99.0 5E-10 1.7E-14 96.8 6.6 90 119-213 8-111 (147)
14 3ksv_A Uncharacterized protein 98.9 8.9E-10 3E-14 95.8 6.5 89 120-213 11-113 (149)
15 1fit_A FragIle histidine prote 98.8 1.5E-08 5.3E-13 87.1 8.7 71 143-213 18-101 (147)
16 3p0t_A Uncharacterized protein 98.8 9.6E-09 3.3E-13 87.5 6.5 88 120-213 5-102 (138)
17 2oik_A Histidine triad (HIT) p 98.8 1.7E-08 5.7E-13 87.7 8.0 85 119-213 9-103 (154)
18 1ems_A Nitfhit, NIT-fragIle hi 98.6 5.6E-08 1.9E-12 97.2 8.8 89 119-213 296-397 (440)
19 3ohe_A Histidine triad (HIT) p 98.4 8.6E-07 2.9E-11 75.9 8.4 68 144-213 19-96 (137)
20 1gup_A Galactose-1-phosphate u 98.3 3.7E-07 1.3E-11 89.4 5.4 91 120-213 194-301 (348)
21 3i24_A HIT family hydrolase; s 98.3 1.4E-06 4.9E-11 75.7 8.3 69 143-213 18-96 (149)
22 1z84_A Galactose-1-phosphate u 98.3 1.9E-05 6.6E-10 77.4 17.2 222 102-338 37-351 (351)
23 1z84_A Galactose-1-phosphate u 98.1 2.9E-06 9.8E-11 83.3 6.9 87 120-213 214-317 (351)
24 3nrd_A Histidine triad (HIT) p 98.1 1.1E-05 3.6E-10 68.8 8.3 67 144-213 21-98 (135)
25 3sp4_A Aprataxin-like protein; 97.7 0.00013 4.6E-09 66.5 9.4 72 143-215 26-126 (204)
26 3i4s_A Histidine triad protein 97.5 0.0003 1E-08 61.0 8.5 67 144-213 24-101 (149)
27 1gup_A Galactose-1-phosphate u 96.1 0.36 1.2E-05 46.8 18.6 216 102-336 24-339 (348)
28 3bl9_A Scavenger mRNA-decappin 92.8 0.41 1.4E-05 45.8 9.1 71 147-218 164-251 (301)
29 1vlr_A MRNA decapping enzyme; 92.0 0.56 1.9E-05 45.7 9.1 71 147-218 211-298 (350)
30 2pof_A CDP-diacylglycerol pyro 73.9 4.6 0.00016 37.1 5.6 121 148-284 40-191 (227)
31 4evx_A Putative phage endolysi 33.8 44 0.0015 26.4 4.2 48 304-352 31-93 (106)
32 1swy_A Lysozyme; RB+ binding s 27.1 72 0.0025 26.9 4.7 32 321-352 56-106 (164)
33 2acm_B Mucin-1; auto-catalytic 26.1 36 0.0012 24.4 2.1 36 66-101 19-54 (55)
34 1whz_A Hypothetical protein; a 22.9 49 0.0017 23.9 2.5 31 312-344 39-69 (70)
35 2o4w_A Lysozyme; protein foldi 21.6 1E+02 0.0035 26.3 4.7 32 321-352 45-95 (171)
No 1
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.21 E-value=1.6e-11 Score=102.73 Aligned_cols=94 Identities=17% Similarity=0.213 Sum_probs=67.0
Q ss_pred CceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCCC--CCCHH-------HHHHHHHHHHH--c
Q 018301 120 EELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRL--YPDAR-------SFEMIVRIAFE--I 188 (358)
Q Consensus 120 ~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~~--~lt~~-------~l~la~~~~~~--~ 188 (358)
+.|+||...+.+.... .+..++.+++++|.+|+.+||+|+||.+|... .|+++ ++..+.++++. .
T Consensus 3 ~~CiFC~I~~ge~~~~----iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~ 78 (119)
T 3n1s_A 3 EETIFSKIIRREIPSD----IVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGI 78 (119)
T ss_dssp CCCHHHHHHTTSSCCC----EEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred CCChhhhhhcCCCcCC----EEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5799996543221111 23348889999999999999999999999854 88875 33445556654 3
Q ss_pred CCCceeEeeccC--CCC-cCceeeeeeecCcee
Q 018301 189 NNYSFRLFYDCS--SPG-ASHVYFQACYFPDHL 218 (358)
Q Consensus 189 ~~~gf~vGyNsg--ga~-anHLHfh~~yl~~~l 218 (358)
+++|||+|+|+| |+. -.|+|+|++. ...+
T Consensus 79 ~~~g~ni~~n~g~~agq~V~HlH~Hiip-r~~~ 110 (119)
T 3n1s_A 79 AEDGYRLIMNTNRHGGQEVYHIHMHLLG-GRPL 110 (119)
T ss_dssp TTTCEEEEEEEHHHHTCCSSSCCEEEEE-SSCC
T ss_pred CCCCeEEEEeCCCCcCCCcCEEEEEEeC-Cccc
Confidence 678999999964 222 3799999997 4443
No 2
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.20 E-value=1.6e-11 Score=113.57 Aligned_cols=91 Identities=15% Similarity=0.174 Sum_probs=65.0
Q ss_pred CceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHH-------HHHHHHHHHHHc-C
Q 018301 120 EELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDAR-------SFEMIVRIAFEI-N 189 (358)
Q Consensus 120 ~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~-------~l~la~~~~~~~-~ 189 (358)
+.|+||......+.... .+..++.+++++|.||+.+||+||||.+|.. + .|+.+ ++..+.+.+++. .
T Consensus 69 ~~CiFC~i~~~e~~~~~---iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~ 145 (218)
T 3ano_A 69 PAQPFTEIPQLSDEEGL---VVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSR 145 (218)
T ss_dssp -CCHHHHGGGSCHHHHT---EEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCcCcccccCCCCCce---EEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 47999976543211221 2334889999999999999999999999985 4 88876 222344455544 6
Q ss_pred CCceeEeeccC----CCCcCceeeeeee
Q 018301 190 NYSFRLFYDCS----SPGASHVYFQACY 213 (358)
Q Consensus 190 ~~gf~vGyNsg----ga~anHLHfh~~y 213 (358)
++|||+|+|.| .+.+.|||+|++.
T Consensus 146 ~~g~ni~~n~G~~aGq~V~~HlHiHIIP 173 (218)
T 3ano_A 146 PHGFNVGLNLGTSAGGSLAEHLHVHVVP 173 (218)
T ss_dssp CSEEEEEEEESGGGTCTTTTSCCEEEEE
T ss_pred CCCEEEEEecCcccCCcccCEEEEEEEc
Confidence 78999999943 3334899999998
No 3
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.19 E-value=2.1e-11 Score=101.43 Aligned_cols=91 Identities=22% Similarity=0.364 Sum_probs=64.6
Q ss_pred CCceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHH-------HHHHHHHHHHHc-
Q 018301 119 NEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDAR-------SFEMIVRIAFEI- 188 (358)
Q Consensus 119 ~~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~-------~l~la~~~~~~~- 188 (358)
...|+||.....+.... .+..++.+++++|.+|+.+||+|+||.+|.. + .|+++ ++..+.++++..
T Consensus 3 ~~~C~FC~i~~~e~~~~----iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~ 78 (119)
T 4egu_A 3 RMDCIFCKIANGEIPST----KVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKG 78 (119)
T ss_dssp CTTCHHHHHHTTSSCCC----EEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHT
T ss_pred CCCccCeecccCCCCCC----EEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhC
Confidence 35799996543321111 2334888999999999999999999999985 4 78765 333444555543
Q ss_pred -CCCceeEeeccC--CCC-cCceeeeeee
Q 018301 189 -NNYSFRLFYDCS--SPG-ASHVYFQACY 213 (358)
Q Consensus 189 -~~~gf~vGyNsg--ga~-anHLHfh~~y 213 (358)
+++|||+|+|.| |+. -.|+|+|++.
T Consensus 79 ~~~~~~ni~~n~g~~agq~v~HlH~Hiip 107 (119)
T 4egu_A 79 FDQTGFRVINNCGSDGGQEVKHLHYHILA 107 (119)
T ss_dssp HHHHCEEEEEEETTTTTCCSCSCCEEEEE
T ss_pred CCCCCEEEEEeCCCCCCCCcCEEEEEEeC
Confidence 367999999965 222 2899999998
No 4
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.17 E-value=3.5e-11 Score=99.92 Aligned_cols=89 Identities=18% Similarity=0.250 Sum_probs=61.4
Q ss_pred ceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHH-------HHHHHHHHHHHcCCC
Q 018301 121 ELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDAR-------SFEMIVRIAFEINNY 191 (358)
Q Consensus 121 eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~-------~l~la~~~~~~~~~~ 191 (358)
.|+||.....+.... .+..++.+++++|.+|+.+||+|+||.+|.. + .|+++ ++..+.++++..-++
T Consensus 8 ~CiFC~i~~~e~~~~----iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~ 83 (117)
T 3oj7_A 8 SCIFCKIAQKQIPST----IVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECPE 83 (117)
T ss_dssp -CHHHHHHTTSSCCC----EEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcccccccCCCCCC----EEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 399997543322111 2334888999999999999999999999985 4 77754 233334444432235
Q ss_pred ceeEeeccCC--CC-cCceeeeeee
Q 018301 192 SFRLFYDCSS--PG-ASHVYFQACY 213 (358)
Q Consensus 192 gf~vGyNsgg--a~-anHLHfh~~y 213 (358)
|||+|+|.|. +. -.|+|+|++-
T Consensus 84 g~ni~~n~g~~agq~v~H~H~Hiip 108 (117)
T 3oj7_A 84 GYRVVNNIGEDAGQTVKHIHFHILG 108 (117)
T ss_dssp CEEEECCCSTTTTCCSSSCCEEEEE
T ss_pred CeEEEEcCCCCCCeeeeEEEEEEeC
Confidence 9999999652 22 3899999997
No 5
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.16 E-value=3.6e-11 Score=102.54 Aligned_cols=88 Identities=17% Similarity=0.345 Sum_probs=67.1
Q ss_pred CCceeeeecCCCcccccccCCccc-CCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHH----HHHHHHHHHHHcCCC
Q 018301 119 NEELLFCVTRSEKANSELIPSAAV-PNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDAR----SFEMIVRIAFEINNY 191 (358)
Q Consensus 119 ~~eclfc~~~~~~~~~e~~~~~~~-~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~----~l~la~~~~~~~~~~ 191 (358)
.+.|+||.... . .. .++ .++.+++++|.+|+.+||+|+||.+|.. + .|+++ +...+.++++..+++
T Consensus 5 ~~~C~fC~i~~--~-~~----~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~~~~~ 77 (135)
T 3r6f_A 5 MEGCIFCTLYR--K-GA----NIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKFGFE 77 (135)
T ss_dssp -CCCHHHHHHH--H-CC----SCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHHHTCC
T ss_pred CCCCcCccccc--C-Cc----eEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHHhCCC
Confidence 45799996533 1 11 233 4888999999999999999999999985 4 88876 455566666666888
Q ss_pred ceeEeeccCCCC-cCceeeeeee
Q 018301 192 SFRLFYDCSSPG-ASHVYFQACY 213 (358)
Q Consensus 192 gf~vGyNsgga~-anHLHfh~~y 213 (358)
+||+|+|.|.+. ..|+|+|++.
T Consensus 78 ~~ni~~n~g~gq~v~HlH~HiiP 100 (135)
T 3r6f_A 78 RYNILQNNGNHQEVFHVHFHVIP 100 (135)
T ss_dssp SEEEECCSSSSCSSSSCCEEEEE
T ss_pred CeEEEEEcCCCCCccEEEEEEec
Confidence 999999977533 3899999997
No 6
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=99.16 E-value=3.1e-11 Score=101.84 Aligned_cols=96 Identities=11% Similarity=0.156 Sum_probs=66.7
Q ss_pred CCCceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCCC--CCCHH-------HHHHHHHHHHHc
Q 018301 118 QNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRL--YPDAR-------SFEMIVRIAFEI 188 (358)
Q Consensus 118 ~~~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~~--~lt~~-------~l~la~~~~~~~ 188 (358)
..+.|+||..-..+.... .+..++.+++++|.+|+.+||+|+||.+|... .|+++ ++..+.++++..
T Consensus 13 ~~~~CiFC~i~~~e~~~~----iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~ 88 (126)
T 3o1c_A 13 PGGDTIFGKIIRKEIPAK----IIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADL 88 (126)
T ss_dssp TTCSSHHHHHHHTSSCCC----EEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCcchhhcCCCcCC----EEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHh
Confidence 356799996532221111 23348899999999999999999999999854 78764 333445555555
Q ss_pred C-CCceeEeeccC--CCC-cCceeeeeeecCcee
Q 018301 189 N-NYSFRLFYDCS--SPG-ASHVYFQACYFPDHL 218 (358)
Q Consensus 189 ~-~~gf~vGyNsg--ga~-anHLHfh~~yl~~~l 218 (358)
. +.|||+|+|.| |+. -.|+|+|++- ...|
T Consensus 89 ~~~~g~ni~~n~g~~agq~v~HlH~Hiip-r~~~ 121 (126)
T 3o1c_A 89 GLKKGYRMVVNEGSDGGQSVYHVHLHVLG-GRQM 121 (126)
T ss_dssp TCTTCEEEECCCHHHHTCCSSSCCEEEEE-SSCC
T ss_pred CCCCCeEEEEecCCccCCccCEeEEEEeC-Cccc
Confidence 3 46999999964 222 3799999997 4443
No 7
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.09 E-value=1.2e-10 Score=101.21 Aligned_cols=91 Identities=16% Similarity=0.271 Sum_probs=65.2
Q ss_pred CCceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCCC--CCCHH-------HHHHHHHHHHHcC
Q 018301 119 NEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRL--YPDAR-------SFEMIVRIAFEIN 189 (358)
Q Consensus 119 ~~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~~--~lt~~-------~l~la~~~~~~~~ 189 (358)
.+.|+||.....+.... .+..++.+++++|.+|+.+||+|+||.+|... .|+++ ++..+.++++...
T Consensus 34 m~~CiFC~ii~~e~~~~----iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~ 109 (147)
T 1xqu_A 34 LENCVFCKIIKRELPST----IYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLG 109 (147)
T ss_dssp CTTCHHHHHHTTSSCBC----EEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTT
T ss_pred cCCCcccccccCCCCcE----EEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 35799997543322111 23348899999999999999999999999854 77653 4444556666554
Q ss_pred --CCceeEeeccCC--CC-cCceeeeeee
Q 018301 190 --NYSFRLFYDCSS--PG-ASHVYFQACY 213 (358)
Q Consensus 190 --~~gf~vGyNsgg--a~-anHLHfh~~y 213 (358)
+.|||+|+|.|. +. -.|+|+|++.
T Consensus 110 ~~~~gyni~~n~g~~aGq~v~HlHlHiiP 138 (147)
T 1xqu_A 110 IAEKGYRLITNCGVAAGQTVFHLHYHLLG 138 (147)
T ss_dssp CTTTCEEEECCCSTTTTCCSCSCCEEEEE
T ss_pred CCCCCEEEEEecCcccCCCccEEEEEEeC
Confidence 459999999652 22 2899999997
No 8
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.04 E-value=3.9e-10 Score=97.67 Aligned_cols=90 Identities=19% Similarity=0.268 Sum_probs=63.4
Q ss_pred CCceeeeecCCCcccccccCCccc-CCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHHH----HHHHH---HHHc
Q 018301 119 NEELLFCVTRSEKANSELIPSAAV-PNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSFE----MIVRI---AFEI 188 (358)
Q Consensus 119 ~~eclfc~~~~~~~~~e~~~~~~~-~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l~----la~~~---~~~~ 188 (358)
...|+||.....+. + ..++ .++.++++++.+|+.+||+|+||.+|.. + .|+++.+. ++.++ +++.
T Consensus 4 m~~CiFC~i~~~e~-~----~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~ 78 (149)
T 3o0m_A 4 SMSCVFCAIVSGDA-P----AIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARES 78 (149)
T ss_dssp TTTCHHHHHHTTSS-C----CCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCccCccccCCC-C----CCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHc
Confidence 45799996543321 1 1233 4888999999999999999999999985 4 88886322 22222 2233
Q ss_pred --CCCceeEeeccC--CCC-cCceeeeeee
Q 018301 189 --NNYSFRLFYDCS--SPG-ASHVYFQACY 213 (358)
Q Consensus 189 --~~~gf~vGyNsg--ga~-anHLHfh~~y 213 (358)
+++|||+++|.| ++. -.|+|+|++.
T Consensus 79 ~~~~~~~ni~~n~g~~aGq~v~HlHiHiiP 108 (149)
T 3o0m_A 79 GLHADGNNIAINDGKAAFQTVFHIHLHVVP 108 (149)
T ss_dssp TTCCSEEEEECCCSGGGTCCSSSCCEEEEE
T ss_pred CCCCCceEEEEecCCCCCCccceEEEEEEC
Confidence 578999999964 222 3799999998
No 9
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.02 E-value=3.7e-10 Score=100.72 Aligned_cols=91 Identities=18% Similarity=0.268 Sum_probs=64.1
Q ss_pred CCCceeeeecCCCcccccccCCccc-CCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHHH----HHHHHH---HH
Q 018301 118 QNEELLFCVTRSEKANSELIPSAAV-PNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSFE----MIVRIA---FE 187 (358)
Q Consensus 118 ~~~eclfc~~~~~~~~~e~~~~~~~-~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l~----la~~~~---~~ 187 (358)
..+.|+||.....+. |..++ .++.++++++.+|..+||+|+||.+|.. + .|+++.+. .+.+++ ..
T Consensus 34 ~m~~CiFC~Ii~~e~-----p~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~ 108 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDI-----PSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQK 108 (173)
T ss_dssp CCTTCHHHHHHHTSS-----CCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCCCcccccccCCC-----CceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 356899996543221 11233 4888999999999999999999999975 4 88887322 222222 22
Q ss_pred -cCCCceeEeeccCC--CC-cCceeeeeee
Q 018301 188 -INNYSFRLFYDCSS--PG-ASHVYFQACY 213 (358)
Q Consensus 188 -~~~~gf~vGyNsgg--a~-anHLHfh~~y 213 (358)
.+++|||+++|.|. +. -.|+|+|++.
T Consensus 109 ~~~~~g~ni~~n~g~~aGq~V~HlHiHiIP 138 (173)
T 3l7x_A 109 ATKADGLNIINNNEETAGQTVFHAHVHLVP 138 (173)
T ss_dssp HHTCSEEEEEECCSGGGTCCSCSCCEEEEE
T ss_pred hcCCCCEEEEEecCcccCCCcCEEEEEEEe
Confidence 36889999999652 22 2899999998
No 10
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.01 E-value=4.9e-10 Score=98.68 Aligned_cols=90 Identities=18% Similarity=0.292 Sum_probs=64.0
Q ss_pred CCceeeeecCCCcccccccCCccc-CCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHHH----HHHHHHH---H-
Q 018301 119 NEELLFCVTRSEKANSELIPSAAV-PNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSFE----MIVRIAF---E- 187 (358)
Q Consensus 119 ~~eclfc~~~~~~~~~e~~~~~~~-~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l~----la~~~~~---~- 187 (358)
.+.|+||.....+. + ..++ .++.++++++.+|+.+||+|+||.+|.. + .|+++.+. .+.++++ +
T Consensus 27 ~~~CiFC~i~~~e~-p----~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~ 101 (161)
T 3lb5_A 27 DNNNIFAKLIRNEI-P----SVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKA 101 (161)
T ss_dssp CTTSHHHHHHTTSS-C----CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccccCCC-C----ccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 45799997644321 1 1233 4889999999999999999999999985 4 88887322 2223332 2
Q ss_pred cCCCceeEeeccCC--CC-cCceeeeeee
Q 018301 188 INNYSFRLFYDCSS--PG-ASHVYFQACY 213 (358)
Q Consensus 188 ~~~~gf~vGyNsgg--a~-anHLHfh~~y 213 (358)
.+++|||+++|.|. +. -.|+|+|++.
T Consensus 102 ~~~~g~ni~~n~g~~aGq~V~HlHiHiiP 130 (161)
T 3lb5_A 102 FQADGITVMQFNEAASQQTVYHLHFHIIP 130 (161)
T ss_dssp HTCSEEEEEEEESGGGTCCSCSCCEEEEE
T ss_pred cCCCCEEEEEecCcccCCCCCEEEEEEEc
Confidence 37889999999542 22 3899999987
No 11
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.01 E-value=3.7e-10 Score=97.57 Aligned_cols=88 Identities=14% Similarity=0.226 Sum_probs=60.7
Q ss_pred eeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHHHH----H---HHHHHH-cCCC
Q 018301 122 LLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSFEM----I---VRIAFE-INNY 191 (358)
Q Consensus 122 clfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l~l----a---~~~~~~-~~~~ 191 (358)
|+||.....+.... .+..++.++++++.+|..+||+|+||.+|.. + .|+++.+.. + .+.+.. .+++
T Consensus 1 CiFC~i~~~e~~~~----iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~ 76 (149)
T 2eo4_A 1 CTFCSIINRELEGY----FVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKAD 76 (149)
T ss_dssp CHHHHHHTTSSCCC----EEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CcCcccccCCCCcc----EEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 78996543321111 2234788999999999999999999999885 4 888863222 2 222222 3678
Q ss_pred ceeEeeccCC--CC-cCceeeeeee
Q 018301 192 SFRLFYDCSS--PG-ASHVYFQACY 213 (358)
Q Consensus 192 gf~vGyNsgg--a~-anHLHfh~~y 213 (358)
|||+++|.|. +. -.|+|+|++.
T Consensus 77 ~~ni~~n~g~~~gq~v~HlHiHviP 101 (149)
T 2eo4_A 77 GLRLLTNIGRSAGQVIFHLHVHIIP 101 (149)
T ss_dssp EEEEECCCSGGGTCCSCSCCEEEEE
T ss_pred CeEEEEecCcCCCCCcCEEEEEEEC
Confidence 9999999652 22 3899999986
No 12
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=98.99 E-value=4.6e-10 Score=96.18 Aligned_cols=91 Identities=13% Similarity=0.216 Sum_probs=62.4
Q ss_pred CCceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHHH-------HHHHHHHH-c
Q 018301 119 NEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSFE-------MIVRIAFE-I 188 (358)
Q Consensus 119 ~~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l~-------la~~~~~~-~ 188 (358)
.+.|+||.....+.... .+..++.++++++.+|..+||+|+||.+|.. + .|+++.+. .+.+.+.. .
T Consensus 4 ~~~C~fC~i~~~e~~~~----iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~ 79 (145)
T 1y23_A 4 AENCIFCKIIAGDIPSA----KVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEF 79 (145)
T ss_dssp -CCCHHHHHHHTSSCCC----EEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHH
T ss_pred CCCCcCCccccCCCCCC----EEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 45799996532211111 2234788999999999999999999999885 4 88876222 22333333 3
Q ss_pred CCCceeEeeccC---CCCcCceeeeeee
Q 018301 189 NNYSFRLFYDCS---SPGASHVYFQACY 213 (358)
Q Consensus 189 ~~~gf~vGyNsg---ga~anHLHfh~~y 213 (358)
+++|||+++|.| |-.-.|+|+|++.
T Consensus 80 ~~~~~ni~~n~g~~~g~~v~HlH~HiiP 107 (145)
T 1y23_A 80 EPIGLNTLNNNGEKAGQSVFHYHMHIIP 107 (145)
T ss_dssp CCSEEEEEEEESGGGTCCSSSCCEEEEE
T ss_pred CCCCEEEEEcCCcCCCCCcCEEEEEEEc
Confidence 778999999954 2223899999986
No 13
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=98.99 E-value=5e-10 Score=96.78 Aligned_cols=90 Identities=16% Similarity=0.298 Sum_probs=63.4
Q ss_pred CCceeeeecCCCcccccccCCccc-CCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHHH----HHHHHH---HH-
Q 018301 119 NEELLFCVTRSEKANSELIPSAAV-PNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSFE----MIVRIA---FE- 187 (358)
Q Consensus 119 ~~eclfc~~~~~~~~~e~~~~~~~-~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l~----la~~~~---~~- 187 (358)
.+.|+||.....+. + ..++ .++.++++++.+|..+||+|+||.+|.. + .|+++.+. .+.+++ .+
T Consensus 8 m~~CifC~i~~~e~-~----~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~ 82 (147)
T 3imi_A 8 ADNCIFCKIIDGQI-L----CSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAE 82 (147)
T ss_dssp GGGCHHHHHHTTSS-C----CCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHH
T ss_pred cCCCcCcccccCCC-c----CCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 45799996543321 1 1233 4888999999999999999999999985 4 88887322 222222 22
Q ss_pred cCCCceeEeeccCC--CC-cCceeeeeee
Q 018301 188 INNYSFRLFYDCSS--PG-ASHVYFQACY 213 (358)
Q Consensus 188 ~~~~gf~vGyNsgg--a~-anHLHfh~~y 213 (358)
.++.|||+|+|.|. +. -.|+|+|++.
T Consensus 83 ~~~~~~ni~~n~g~~aGq~v~HlHiHiiP 111 (147)
T 3imi_A 83 FNPVGFNLLNNNGEKAGQTVFHFHLHLIP 111 (147)
T ss_dssp HCCSEEEEEEEESGGGTCCSSSCCEEEEE
T ss_pred cCCCCEEEEEeCCcccCCCcCEEEEEEeC
Confidence 36889999999542 22 3899999988
No 14
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=98.94 E-value=8.9e-10 Score=95.76 Aligned_cols=89 Identities=19% Similarity=0.353 Sum_probs=62.6
Q ss_pred CceeeeecCCCcccccccCCccc-CCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHH----HHHHHHHHH---c-
Q 018301 120 EELLFCVTRSEKANSELIPSAAV-PNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSF----EMIVRIAFE---I- 188 (358)
Q Consensus 120 ~eclfc~~~~~~~~~e~~~~~~~-~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l----~la~~~~~~---~- 188 (358)
..|+||..-+.+. |+.++ .++.++++++.+|..+||+|+||.+|.. + .|+++.+ ..+.++++. .
T Consensus 11 ~~~iFc~Ii~gei-----p~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~ 85 (149)
T 3ksv_A 11 ANCIFCKIIKGDI-----PCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPD 85 (149)
T ss_dssp TTCHHHHHHHTSS-----CCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHcCCC-----CccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 4699996433221 11233 4788999999999999999999999985 4 8887632 222233222 2
Q ss_pred CCCceeEeeccCC--CCc-Cceeeeeee
Q 018301 189 NNYSFRLFYDCSS--PGA-SHVYFQACY 213 (358)
Q Consensus 189 ~~~gf~vGyNsgg--a~a-nHLHfh~~y 213 (358)
+++|||+++|.|. +.. .|+|+|++.
T Consensus 86 ~~~g~ni~~n~g~~aGq~v~HlHiHiiP 113 (149)
T 3ksv_A 86 GSMQYNVLQNNGSLAHQEVPHVHFHIIP 113 (149)
T ss_dssp SCCEEEEEECCSTTTTCCSSSCCEEEEE
T ss_pred CCCCEEEEEecCcccCCCCCEEEEEEEe
Confidence 5779999999653 222 899999997
No 15
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=98.79 E-value=1.5e-08 Score=87.11 Aligned_cols=71 Identities=14% Similarity=0.184 Sum_probs=53.1
Q ss_pred CCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHHH----HH---HHHHHH-cCCCceeEeeccC--CCC-cCceee
Q 018301 143 PNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSFE----MI---VRIAFE-INNYSFRLFYDCS--SPG-ASHVYF 209 (358)
Q Consensus 143 ~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l~----la---~~~~~~-~~~~gf~vGyNsg--ga~-anHLHf 209 (358)
.++.++++++.+|..+||+|+||.+|.. + .|+++.+. .+ .+.+.. .+++|||+|+|+| ++. -.|+|+
T Consensus 18 e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~agq~v~HlH~ 97 (147)
T 1fit_A 18 KTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHV 97 (147)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGTCCSSSCCE
T ss_pred ECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCccEEEE
Confidence 3788999999999999999999999875 4 88876322 22 222222 2678999999965 222 389999
Q ss_pred eeee
Q 018301 210 QACY 213 (358)
Q Consensus 210 h~~y 213 (358)
|++.
T Consensus 98 HiiP 101 (147)
T 1fit_A 98 HVLP 101 (147)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9987
No 16
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=98.76 E-value=9.6e-09 Score=87.48 Aligned_cols=88 Identities=15% Similarity=0.177 Sum_probs=57.7
Q ss_pred CceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHH----HHHHHHHH---Hc-C
Q 018301 120 EELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSF----EMIVRIAF---EI-N 189 (358)
Q Consensus 120 ~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l----~la~~~~~---~~-~ 189 (358)
..|+||.....+.... .+..++.+++++|.+|+.+||+|+||.+|.. + .|+++.+ ..+.++++ +. +
T Consensus 5 ~~CiFC~i~~~e~p~~----iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~ 80 (138)
T 3p0t_A 5 MASIFTKIINRELPGR----FVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFR 80 (138)
T ss_dssp HHHHHHHHHTTSSCCC----EEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCChhhHHhcCCCCcC----EEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4699996543322111 2334889999999999999999999999975 4 8888632 22222222 22 5
Q ss_pred CCceeEeeccCCCCcCceeeeeee
Q 018301 190 NYSFRLFYDCSSPGASHVYFQACY 213 (358)
Q Consensus 190 ~~gf~vGyNsgga~anHLHfh~~y 213 (358)
++++++ ..+|-.-.|+|+|++.
T Consensus 81 ~~~~n~--~~~gq~v~HlH~HiiP 102 (138)
T 3p0t_A 81 TERSGL--IIAGLEVPHLHVHVFP 102 (138)
T ss_dssp CSEEEE--EECCSSCSSCCEEEEE
T ss_pred CCCCcE--EECCcccCEEEEEEec
Confidence 665444 4444334799999987
No 17
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=98.75 E-value=1.7e-08 Score=87.65 Aligned_cols=85 Identities=13% Similarity=0.064 Sum_probs=58.7
Q ss_pred CCceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHHH----H---HHHHHHHc-
Q 018301 119 NEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSFE----M---IVRIAFEI- 188 (358)
Q Consensus 119 ~~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l~----l---a~~~~~~~- 188 (358)
...|+||... + .. .+..++.++++++.+|..+||+|+||.+|.. + .|+++... . +.+.+++.
T Consensus 9 ~~~C~FC~~~-~---~~----iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~ 80 (154)
T 2oik_A 9 HKNCELCTTA-G---GE----ILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVM 80 (154)
T ss_dssp CTTCHHHHSC-C---SE----EEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCCC-C---Ce----EEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 4579999532 1 11 1234788999999999999999999999985 4 88876222 2 22233332
Q ss_pred CCCceeEeeccCCCCcCceeeeeee
Q 018301 189 NNYSFRLFYDCSSPGASHVYFQACY 213 (358)
Q Consensus 189 ~~~gf~vGyNsgga~anHLHfh~~y 213 (358)
+++|||++ .+|-...|+|+|++.
T Consensus 81 ~~~g~ni~--~~gq~v~HlHiHiiP 103 (154)
T 2oik_A 81 RPDKINLA--SLGNMTPHVHWHVIP 103 (154)
T ss_dssp CCSEEEEE--ECCSSSCSCEEEEEE
T ss_pred CCCcEEhH--HhCCCCCEEEEEEeC
Confidence 67788887 233334799999987
No 18
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=98.63 E-value=5.6e-08 Score=97.17 Aligned_cols=89 Identities=17% Similarity=0.115 Sum_probs=61.7
Q ss_pred CCceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHHH----HHHHHHH---HHc-
Q 018301 119 NEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARSF----EMIVRIA---FEI- 188 (358)
Q Consensus 119 ~~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~l----~la~~~~---~~~- 188 (358)
.+.|+||....+.. . .+..++.++++++.+|..+||+|+||.+|.. + .|+++.+ ..+.+++ ...
T Consensus 296 ~~~c~fc~~e~p~~--~----iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~ 369 (440)
T 1ems_A 296 TGGLKFARFNIPAD--H----IFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHH 369 (440)
T ss_dssp SSCCEETTEECCGG--G----EEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCceeeeccccCCc--e----EEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 45799996222211 1 1234788999999999999999999999885 4 8887622 2222222 222
Q ss_pred CCCceeEeeccCC--CC-cCceeeeeee
Q 018301 189 NNYSFRLFYDCSS--PG-ASHVYFQACY 213 (358)
Q Consensus 189 ~~~gf~vGyNsgg--a~-anHLHfh~~y 213 (358)
+++|||+|+|.|- +. -.|+|+|++.
T Consensus 370 ~~~~~n~~~~~g~~~gq~v~HlH~Hiip 397 (440)
T 1ems_A 370 NVTSTTICVQDGKDAGQTVPHVHIHILP 397 (440)
T ss_dssp TCSEEEEECCCSGGGTCCSSSCCEEEEE
T ss_pred CCCCeEEEEecCCCCCCCccEEEEEEeC
Confidence 6789999999652 22 3899999987
No 19
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=98.38 E-value=8.6e-07 Score=75.89 Aligned_cols=68 Identities=6% Similarity=-0.080 Sum_probs=49.1
Q ss_pred CCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHH----HHHHH---HHHHH-cCCCceeEeeccCCCCcCceeeeeee
Q 018301 144 NDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARS----FEMIV---RIAFE-INNYSFRLFYDCSSPGASHVYFQACY 213 (358)
Q Consensus 144 ~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~----l~la~---~~~~~-~~~~gf~vGyNsgga~anHLHfh~~y 213 (358)
...+.+++|.+|+.+||+|++|.+|.. + .|+++. +..+. +.+++ .++.++|+| .+|-.-.|+|+|++.
T Consensus 19 ~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~--~aGq~V~HlH~HviP 96 (137)
T 3ohe_A 19 SRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVA--ALGNMVPQLHLHHIV 96 (137)
T ss_dssp CSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE--ECCSSCCSCCEEEEE
T ss_pred CCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe--eccCcCCEEEEEEeC
Confidence 678999999999999998888878774 4 888762 22222 22222 377899888 334334799999987
No 20
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=98.33 E-value=3.7e-07 Score=89.39 Aligned_cols=91 Identities=4% Similarity=-0.073 Sum_probs=60.8
Q ss_pred CceeeeecCCCc-ccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCCC--CCCHHHHHH-------HHHHHHH-c
Q 018301 120 EELLFCVTRSEK-ANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRL--YPDARSFEM-------IVRIAFE-I 188 (358)
Q Consensus 120 ~eclfc~~~~~~-~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~~--~lt~~~l~l-------a~~~~~~-~ 188 (358)
..|+||..-..+ ...+. .+..+++++++++.+|..+||+|+||.+|... .|+++.... +.+.+.. .
T Consensus 194 ~~Cifc~ii~~E~~~~~~---iV~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~ 270 (348)
T 1gup_A 194 KSPMLVDYVQRELADGSR---TVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLF 270 (348)
T ss_dssp SSCHHHHHHHHHHHHCTT---EEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhHHHhhccccCce---EEEeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 579999643221 10111 23347889999999999999999999999854 888762221 1222222 3
Q ss_pred CCC-ceeEeeccC----CCCc-Cceeeeeee
Q 018301 189 NNY-SFRLFYDCS----SPGA-SHVYFQACY 213 (358)
Q Consensus 189 ~~~-gf~vGyNsg----ga~a-nHLHfh~~y 213 (358)
+.+ +||+|+|.+ ++.. .|+|+|++.
T Consensus 271 ~~~~~Yn~g~~~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 271 QCSFPYSMGWHGAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp TSCCCEEEEEECCCSSSSCCTTCCCEEEEEC
T ss_pred CCCCCeEEEEEeCCCCCCCCcccEEEEEEec
Confidence 665 999999943 2223 799999987
No 21
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=98.32 E-value=1.4e-06 Score=75.69 Aligned_cols=69 Identities=4% Similarity=-0.079 Sum_probs=49.2
Q ss_pred CCCceEEEEeCcCCCCCeEEEeecCCCC-C-CCCHHH----HHHH---HHHHHH-cCCCceeEeeccCCCCcCceeeeee
Q 018301 143 PNDSILVIINANPIEYGHVFVVPCGSNR-L-YPDARS----FEMI---VRIAFE-INNYSFRLFYDCSSPGASHVYFQAC 212 (358)
Q Consensus 143 ~~~~~~VliN~~Pi~~gH~LlVP~~~~~-~-~lt~~~----l~la---~~~~~~-~~~~gf~vGyNsgga~anHLHfh~~ 212 (358)
.+..++|++|.+|+.+||+|++|.+|.. + .|+++. +..+ .+.+++ .++.++|+| ++|-...|+|+|++
T Consensus 18 ~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~--~aGq~V~HlH~HvI 95 (149)
T 3i24_A 18 NLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIG--ALGNLVPQLHIHHI 95 (149)
T ss_dssp ECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEE--ECCSSCCSCCEEEE
T ss_pred ECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEh--hhhCCCCEEEEEEe
Confidence 3678999999999999998887777774 4 888762 2222 222333 378888888 33333479999998
Q ss_pred e
Q 018301 213 Y 213 (358)
Q Consensus 213 y 213 (358)
.
T Consensus 96 P 96 (149)
T 3i24_A 96 A 96 (149)
T ss_dssp E
T ss_pred C
Confidence 7
No 22
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.31 E-value=1.9e-05 Score=77.38 Aligned_cols=222 Identities=18% Similarity=0.196 Sum_probs=119.3
Q ss_pred EcCccccCccCCcccc------CCCceeeeecCCCcccccccCCccc---CCCceEEEEeCcCCCC------------C-
Q 018301 102 LNEKWIMDPFILNSID------QNEELLFCVTRSEKANSELIPSAAV---PNDSILVIINANPIEY------------G- 159 (358)
Q Consensus 102 lNp~R~~~~~kfnf~k------~~~eclfc~~~~~~~~~e~~~~~~~---~~~~~~VliN~~Pi~~------------g- 159 (358)
.+|.|...+-.+.-.+ ....|.||..+......+.. .+. ++-.++|+.|.||+.. |
T Consensus 37 vs~~R~~RP~~~~~~~~~~~~~~~~~CpfCpg~~~~t~~e~~--~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l 114 (351)
T 1z84_A 37 FSPARAKRPTDFKSKSPQNPNPKPSSCPFCIGREQECAPELF--RVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGT 114 (351)
T ss_dssp ECC----CGGGCCCCCC-------CCCTTSTTCGGGSSCEEE--EESTTCSSCSEEEEECSSCSSBGGGTTTC-------
T ss_pred EeCCCCCCCCCCcccccccccCCCCCCcCCCCCcccCCcccc--cccccCCCceEEEEcCCCccccCCCCCcccccccch
Confidence 5688887765432111 12269999854332112211 111 2356899999999994 5
Q ss_pred ----------eEEEeecCCCC-C-CCCHHHHHHH----HHHHHHc----CCCceeEeec----cCCCCcCceeeeeeecC
Q 018301 160 ----------HVFVVPCGSNR-L-YPDARSFEMI----VRIAFEI----NNYSFRLFYD----CSSPGASHVYFQACYFP 215 (358)
Q Consensus 160 ----------H~LlVP~~~~~-~-~lt~~~l~la----~~~~~~~----~~~gf~vGyN----sgga~anHLHfh~~yl~ 215 (358)
+|++.+..|.. + .|+.+-+... .+-+++. +..++.+|-| +||+.+ |.|.|++-++
T Consensus 115 ~~~~~~~G~~~Vii~sp~H~~~l~~ls~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~-HpH~QI~a~~ 193 (351)
T 1z84_A 115 SRTIVGFGFHDVVIESPVHSIQLSDIDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMS-HSHSQMMALP 193 (351)
T ss_dssp -CEEECBCEEEEEECCSSSSCCGGGSCHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCS-SCEEEEEEES
T ss_pred hhccccCcceEEEEeCCCCCCCcHHCCHHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCc-CccceeEecC
Confidence 77888888884 4 8998733332 2222222 3569999999 566665 9999999855
Q ss_pred ceecccccC----------------CcccccC-----CCCceEEEE--ccCCceeEEEEEEe---------cCCHHHHHH
Q 018301 216 DHLPVELMP----------------IDTFFSD-----GQRGIYIST--LIDYPIKTILFEYT---------YNNRIIMME 263 (358)
Q Consensus 216 ~~lPiE~~~----------------~~~l~~~-----~~~g~~v~~--l~dyP~~~~vf~~~---------~~~~e~~~~ 263 (358)
. +|-+-.. ...+... .++...... -.-||...+++--. .....+++.
T Consensus 194 ~-~p~~~~~e~~~~~~y~~~~~~ciFc~ii~~E~iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~ 272 (351)
T 1z84_A 194 V-VPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGG 272 (351)
T ss_dssp S-CCHHHHHHHHHHHHHHHHHSSCTTTTHHHHSEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHH
T ss_pred c-CChHHHHHHHHHHHHHhhcCCCHHHHHHhcCeEEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHH
Confidence 4 3221111 0111110 011211111 02345656555331 113345556
Q ss_pred HHHHHHHHhhh--cCCCceEEEEeC---C---------eEEEEEeccCCCCcCchhccc-cceeeecChHHHhhcCHHHH
Q 018301 264 AISEICSSLRE--KNISYNLLISDC---G---------KRIFLFLQKSAISGNLLAWEC-GGYFLFGSKYEFDQVTEEAI 328 (358)
Q Consensus 264 ~~~~~~~~L~~--~ni~~Nll~~~~---g---------~rv~ifPR~~~~~~npa~~El-aG~lv~~r~eDFe~lTee~~ 328 (358)
++.++...|.. ...+||+.+-.. | +.+-|+||.+. . +-.|| .|..+ ...|.|++
T Consensus 273 ~l~~v~~~l~~~~~~~~yn~~~n~gp~~g~~~~q~v~HlHiHiiPR~~~---~-~Gfe~~~~~~i-------~~~~pE~~ 341 (351)
T 1z84_A 273 LLKLMLQKIAKQLNDPPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLSG---V-GGFEIGTGCYI-------NPVFPEDV 341 (351)
T ss_dssp HHHHHHHHHHHHTTSCCEEEEEECCCTTCCGGGGGGCCCEEEEEECCCC---C-CHHHHHHSCCE-------ESSCHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeCCCccCCCCCCccceEEEEEEccCCC---c-CccccccCccc-------CCccHHHH
Confidence 66655544322 122899998741 1 68889998862 1 22454 23222 34789999
Q ss_pred HHHHHhccCC
Q 018301 329 HKRLSAVSLN 338 (358)
Q Consensus 329 ~~il~evsls 338 (358)
.+.|+++.|+
T Consensus 342 A~~LR~~~~~ 351 (351)
T 1z84_A 342 AKVMREVSLT 351 (351)
T ss_dssp HHHHHHCCCC
T ss_pred HHHHHhccCC
Confidence 9999998874
No 23
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.13 E-value=2.9e-06 Score=83.30 Aligned_cols=87 Identities=11% Similarity=0.172 Sum_probs=60.7
Q ss_pred CceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCCC--CCCHHHHHH-------HH-HHHHHcC
Q 018301 120 EELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRL--YPDARSFEM-------IV-RIAFEIN 189 (358)
Q Consensus 120 ~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~~--~lt~~~l~l-------a~-~~~~~~~ 189 (358)
..|+||..-.. |. .+..++++++++..+|..+||+|+||.+|... .|+++.... +. ++.+..+
T Consensus 214 ~~ciFc~ii~~----E~---iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~ 286 (351)
T 1z84_A 214 GKCCLCEAKSK----HF---VIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLN 286 (351)
T ss_dssp SSCTTTTHHHH----SE---EEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHhc----Ce---EEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46999964321 11 23347889999999999999999999999854 888762221 11 2222346
Q ss_pred CCceeEeeccC---CC----CcCceeeeeee
Q 018301 190 NYSFRLFYDCS---SP----GASHVYFQACY 213 (358)
Q Consensus 190 ~~gf~vGyNsg---ga----~anHLHfh~~y 213 (358)
.++||+|+|.+ |+ ..-|+|+|++.
T Consensus 287 ~~~yn~~~n~gp~~g~~~~q~v~HlHiHiiP 317 (351)
T 1z84_A 287 DPPYNYMIHTSPLKVTESQLPYTHWFLQIVP 317 (351)
T ss_dssp SCCEEEEEECCCTTCCGGGGGGCCCEEEEEE
T ss_pred CCCEEEEEeCCCccCCCCCCccceEEEEEEc
Confidence 67999999954 21 22699999988
No 24
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=98.06 E-value=1.1e-05 Score=68.83 Aligned_cols=67 Identities=3% Similarity=-0.234 Sum_probs=46.9
Q ss_pred CCceEEEEeCcCCCCCeEEEeecC-CCC-C-CCCHHH----HHHHH---HHHHH-cCCCceeEeeccCCCCcCceeeeee
Q 018301 144 NDSILVIINANPIEYGHVFVVPCG-SNR-L-YPDARS----FEMIV---RIAFE-INNYSFRLFYDCSSPGASHVYFQAC 212 (358)
Q Consensus 144 ~~~~~VliN~~Pi~~gH~LlVP~~-~~~-~-~lt~~~----l~la~---~~~~~-~~~~gf~vGyNsgga~anHLHfh~~ 212 (358)
...+.|++|.+|+.+|| |+||.+ |.. + .|+++. +..+. +.+++ .++.|+|+| ++|-...|+|+|++
T Consensus 21 ~~~~~v~l~~~~~~p~~-lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~--~aGq~V~HlH~Hvi 97 (135)
T 3nrd_A 21 LGLCQMRLMNDRRWPWL-ILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIG--ALGNIVRQLHVHVI 97 (135)
T ss_dssp CSSEEEEEESCTTSCEE-EEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE--ECCSSCCSCCEEEE
T ss_pred CCcEEEEEcCCCCCCEE-EEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe--eccCCCCEEEEEEe
Confidence 56789999999999976 889995 554 4 888762 22222 22223 378888888 34433479999998
Q ss_pred e
Q 018301 213 Y 213 (358)
Q Consensus 213 y 213 (358)
-
T Consensus 98 P 98 (135)
T 3nrd_A 98 A 98 (135)
T ss_dssp E
T ss_pred c
Confidence 7
No 25
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=97.70 E-value=0.00013 Score=66.47 Aligned_cols=72 Identities=10% Similarity=0.120 Sum_probs=47.1
Q ss_pred CCCceEEEEeCcCCCCCeEEEeecCCCCC--CCCH------HHHHHHHHHHH------H----------c-CCC----ce
Q 018301 143 PNDSILVIINANPIEYGHVFVVPCGSNRL--YPDA------RSFEMIVRIAF------E----------I-NNY----SF 193 (358)
Q Consensus 143 ~~~~~~VliN~~Pi~~gH~LlVP~~~~~~--~lt~------~~l~la~~~~~------~----------~-~~~----gf 193 (358)
.++.++++.+.+|..+||+||||..|... .++. .++.....++. . . ... .|
T Consensus 26 edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~~~i 105 (204)
T 3sp4_A 26 YDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALCNYI 105 (204)
T ss_dssp ECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHHTTE
T ss_pred EcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCeeeeE
Confidence 47889999999999999999999999854 2221 12222222222 1 1 111 46
Q ss_pred eEeeccCCCCcCceeeeeeecC
Q 018301 194 RLFYDCSSPGASHVYFQACYFP 215 (358)
Q Consensus 194 ~vGyNsgga~anHLHfh~~yl~ 215 (358)
|+||-++=+. +|||+|+...+
T Consensus 106 ~~GfHa~PSm-~HLHLHVIS~D 126 (204)
T 3sp4_A 106 KVGFHAGPSM-NNLHLHIMTLD 126 (204)
T ss_dssp EEEEESSCSS-SSCCEEEEESC
T ss_pred eccCCCCCcc-cceeEEEeccC
Confidence 7777754433 89999999833
No 26
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=97.51 E-value=0.0003 Score=60.96 Aligned_cols=67 Identities=12% Similarity=0.079 Sum_probs=44.1
Q ss_pred CCceEEEEeCcCCCCCeEEEeecC-CCC-C-CCCHHHH----HHHHHHH---HH-cCCCceeEeeccCCCCcCceeeeee
Q 018301 144 NDSILVIINANPIEYGHVFVVPCG-SNR-L-YPDARSF----EMIVRIA---FE-INNYSFRLFYDCSSPGASHVYFQAC 212 (358)
Q Consensus 144 ~~~~~VliN~~Pi~~gH~LlVP~~-~~~-~-~lt~~~l----~la~~~~---~~-~~~~gf~vGyNsgga~anHLHfh~~ 212 (358)
...+.|++|..| .++|+|+||.+ |.. + .|+++.. ..+.+++ ++ .++.|||+| .+|-...|+|+|++
T Consensus 24 ~p~~~v~l~~~~-~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~N~~--~aGq~V~HlH~HvI 100 (149)
T 3i4s_A 24 LPLSKVLVIKDA-NYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKLNIA--ALGNLVPQLHVHII 100 (149)
T ss_dssp CSSEEEEEESCT-TSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE--ECCSSCCSCCEEEE
T ss_pred cCceEEEECCCC-CCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe--ecCCcCCEEEEEEE
Confidence 356788888766 56799999999 554 4 8887622 2222222 22 267788776 33333479999998
Q ss_pred e
Q 018301 213 Y 213 (358)
Q Consensus 213 y 213 (358)
-
T Consensus 101 P 101 (149)
T 3i4s_A 101 A 101 (149)
T ss_dssp E
T ss_pred C
Confidence 8
No 27
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=96.14 E-value=0.36 Score=46.80 Aligned_cols=216 Identities=14% Similarity=0.142 Sum_probs=116.1
Q ss_pred EcCccccCccCCcccc--------CCCceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCC--------------
Q 018301 102 LNEKWIMDPFILNSID--------QNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYG-------------- 159 (358)
Q Consensus 102 lNp~R~~~~~kfnf~k--------~~~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~g-------------- 159 (358)
.+|.|+..+-.+.-.+ ....|.||..+....... ...-+...|+-|.||....
T Consensus 24 vs~~R~~RP~~~~~~~~~~~~~p~~~~~CpfCpg~~~~t~~~-----~p~~~~~~v~~N~fpal~~~~~~~~~~~~~l~~ 98 (348)
T 1gup_A 24 VSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDK-----NPDYTGTYVFTNDFAALMSDTPDAPESHDPLMR 98 (348)
T ss_dssp ECTTGGGSCCCSCCCCCCCSCCCSCCTTCTTSTTCBCTTSCB-----CCCCSSCEEEECTTCSCCTTCCCCCCCCCSSSC
T ss_pred EeCCCCCCCCCCccccccccCCCCCCCCCCCCCCCcccCCCC-----CCCCceEEEecCCCceeccCCCCccccCcccee
Confidence 5688887765332111 123699997653321000 0111237899999998831
Q ss_pred -------eEEEeecCCCC--C-CCCHHHHHHHHH----HHHHc--CCCceeEeecc----CCCCcCceeeeeeecCceec
Q 018301 160 -------HVFVVPCGSNR--L-YPDARSFEMIVR----IAFEI--NNYSFRLFYDC----SSPGASHVYFQACYFPDHLP 219 (358)
Q Consensus 160 -------H~LlVP~~~~~--~-~lt~~~l~la~~----~~~~~--~~~gf~vGyNs----gga~anHLHfh~~yl~~~lP 219 (358)
|-.+|=...|. + .++.+-+...+. -.++. .-.+.-+|=|. ||+. .|-|-|++-++. +|
T Consensus 99 ~~~~~G~~~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~~~~~yV~iF~N~G~~~G~Sl-~HpH~Qi~a~~~-~p 176 (348)
T 1gup_A 99 CQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSN-PHPGGQIWANSF-LP 176 (348)
T ss_dssp EEECCEEEEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHCSEEEEEEEESGGGTCSC-CSSEEEEEEESS-CC
T ss_pred cCccceeEEEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHhhcCCEEEEecccCCcCCcCC-CCCceeEEeccc-CC
Confidence 34444444443 3 778763332222 22222 34577789993 4444 699999998554 32
Q ss_pred cccc--------------C--------------CcccccCCCCceEEEEccC----CceeEEEEEEe---------cCCH
Q 018301 220 VELM--------------P--------------IDTFFSDGQRGIYISTLID----YPIKTILFEYT---------YNNR 258 (358)
Q Consensus 220 iE~~--------------~--------------~~~l~~~~~~g~~v~~l~d----yP~~~~vf~~~---------~~~~ 258 (358)
-+-. . .+.|+. ++.. ..+.+ +|...+|+--. ....
T Consensus 177 ~~~~~e~~~~~~y~~~~~~Cifc~ii~~E~~~~~~iV~E--~e~~--~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~ 252 (348)
T 1gup_A 177 NEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVE--TEHW--LAVVPYWAAWPFETLLLPKAHVLRITDLTDAQR 252 (348)
T ss_dssp HHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHCTTEEEE--CSSE--EEECCTTCCSTTCEEEEESSCCSSGGGCCHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCchhHHHhhccccCceEEEe--CCcE--EEEEccCCCCceEEEEEeCcccCChHHCCHHHH
Confidence 2111 0 011221 2222 22223 36666665421 1233
Q ss_pred HHHHHHHHHHHHHhhh---cCCCceEEEEe---CC-------eEEEEEe---ccC-CCCcCchhccccceeeecChHHHh
Q 018301 259 IIMMEAISEICSSLRE---KNISYNLLISD---CG-------KRIFLFL---QKS-AISGNLLAWECGGYFLFGSKYEFD 321 (358)
Q Consensus 259 e~~~~~~~~~~~~L~~---~ni~~Nll~~~---~g-------~rv~ifP---R~~-~~~~npa~~ElaG~lv~~r~eDFe 321 (358)
.+++..+.++...|.. ...+||+.+-. +| +.+-|+| |.. +.. +.+.+|+++-. +.
T Consensus 253 ~~La~~l~~v~~~l~~~~~~~~~Yn~g~~~~p~~g~~q~v~HlHiHiiPpl~R~~~~~~-~~~g~e~~~~~-------~~ 324 (348)
T 1gup_A 253 SDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRK-FMVGYEMLAET-------QR 324 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCEEEEEECCCSSSSCCTTCCCEEEEECCBCSSSSCBC-CCCTHHHHTCC-------EE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCCCCCCcccEEEEEEecchhccCCccc-ceeeEecccCC-------CC
Confidence 4555555555555433 33589998762 11 6888999 876 333 44667874321 24
Q ss_pred hcCHHHHHHHHHhcc
Q 018301 322 QVTEEAIHKRLSAVS 336 (358)
Q Consensus 322 ~lTee~~~~il~evs 336 (358)
.+|.|++.+.|+++.
T Consensus 325 ~~~pE~~A~~Lr~~~ 339 (348)
T 1gup_A 325 DLTAEQAAERLRAVS 339 (348)
T ss_dssp SSCHHHHHHHHHTSC
T ss_pred CCCHHHHHHHHHhhh
Confidence 477999999999874
No 28
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=92.76 E-value=0.41 Score=45.85 Aligned_cols=71 Identities=6% Similarity=-0.002 Sum_probs=50.1
Q ss_pred eEEEEeC----cCCCCCeEEEeecCCC--CC-CCCHH-------HHHHHHHHHHHc---CCCceeEeeccCCCCcCceee
Q 018301 147 ILVIINA----NPIEYGHVFVVPCGSN--RL-YPDAR-------SFEMIVRIAFEI---NNYSFRLFYDCSSPGASHVYF 209 (358)
Q Consensus 147 ~~VliN~----~Pi~~gH~LlVP~~~~--~~-~lt~~-------~l~la~~~~~~~---~~~gf~vGyNsgga~anHLHf 209 (358)
++|+-.. .|...-|+|.||.+++ ++ .|+.+ |...+.+++.+. ....+|+||=..=++ -|||+
T Consensus 164 FvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~~~~~~rlgfHy~PS~-yHLHl 242 (301)
T 3bl9_A 164 FVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSY-YHLHV 242 (301)
T ss_dssp EEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEESSCSS-SSCEE
T ss_pred EEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEEecCCCCc-ceEEE
Confidence 4444433 4999999999999985 45 78876 444455555542 467999999944344 79999
Q ss_pred eeeecCcee
Q 018301 210 QACYFPDHL 218 (358)
Q Consensus 210 h~~yl~~~l 218 (358)
|+...+..-
T Consensus 243 Hvis~~~~s 251 (301)
T 3bl9_A 243 HFTALGFEA 251 (301)
T ss_dssp EEEETTSCC
T ss_pred EEEecCCCC
Confidence 999965443
No 29
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=92.02 E-value=0.56 Score=45.74 Aligned_cols=71 Identities=6% Similarity=-0.011 Sum_probs=50.2
Q ss_pred eEEEEeC----cCCCCCeEEEeecCCC--CC-CCCHH-------HHHHHHHHHHHc---CCCceeEeeccCCCCcCceee
Q 018301 147 ILVIINA----NPIEYGHVFVVPCGSN--RL-YPDAR-------SFEMIVRIAFEI---NNYSFRLFYDCSSPGASHVYF 209 (358)
Q Consensus 147 ~~VliN~----~Pi~~gH~LlVP~~~~--~~-~lt~~-------~l~la~~~~~~~---~~~gf~vGyNsgga~anHLHf 209 (358)
++|+-.. .|...-|+|.||.+++ ++ .|+.+ |...+.+++.+. ....||+||=..=++ -|||+
T Consensus 211 FvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~~~~~lRlgfHy~PS~-yHLHl 289 (350)
T 1vlr_A 211 FVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLRVYLHYLPSY-YHLHV 289 (350)
T ss_dssp EEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEESSCSS-SSCEE
T ss_pred eEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEEecCCCCc-ceEEE
Confidence 4444433 4999999999999985 45 78876 344455555542 467999999944344 79999
Q ss_pred eeeecCcee
Q 018301 210 QACYFPDHL 218 (358)
Q Consensus 210 h~~yl~~~l 218 (358)
|++..+..-
T Consensus 290 Hvis~~~~s 298 (350)
T 1vlr_A 290 HFTALGFEA 298 (350)
T ss_dssp EEEETTSCC
T ss_pred EEEeccCCC
Confidence 999965443
No 30
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=73.94 E-value=4.6 Score=37.09 Aligned_cols=121 Identities=9% Similarity=0.065 Sum_probs=72.1
Q ss_pred EEEEeCcCCCCCeEEEeecCCCC----C-CCC---HHHHHHHHHH---HHH-----cCCCceeEeeccCCCCc-Cceeee
Q 018301 148 LVIINANPIEYGHVFVVPCGSNR----L-YPD---ARSFEMIVRI---AFE-----INNYSFRLFYDCSSPGA-SHVYFQ 210 (358)
Q Consensus 148 ~VliN~~Pi~~gH~LlVP~~~~~----~-~lt---~~~l~la~~~---~~~-----~~~~gf~vGyNsgga~a-nHLHfh 210 (358)
+|++.- +..+-|.|+||..... + .++ ++.+..|+.. +.+ ..+...-+..||-.+=. ||||.|
T Consensus 40 yvvlKD-~~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~~gRSQnQLHIH 118 (227)
T 2pof_A 40 YVVLKD-LNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIH 118 (227)
T ss_dssp EEEEEC-SSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCGGGCSCCSCCEE
T ss_pred EEEEeC-CCCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCCCCccccceeee
Confidence 445544 7789999999987662 2 443 3466666553 222 35678999999887666 999999
Q ss_pred eeecCceec---------ccccCCcccccCCCCceEEEEccCCceeEEEEEEecCCHHHHH--HHHHHHHHHhhhcC--C
Q 018301 211 ACYFPDHLP---------VELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMM--EAISEICSSLREKN--I 277 (358)
Q Consensus 211 ~~yl~~~lP---------iE~~~~~~l~~~~~~g~~v~~l~dyP~~~~vf~~~~~~~e~~~--~~~~~~~~~L~~~n--i 277 (358)
+-.++-..- +-..| .++.. + |.+.+-.+..+.. .++. +-|..+.+.++... +
T Consensus 119 IsClrp~V~~~L~~~~~~i~~~W-~~lp~----~-----L~gh~Y~arrv~~-----~~l~~~~pF~~La~~~~~~~~~m 183 (227)
T 2pof_A 119 ISCIRPDVREQLDNNLANISSRW-LPLPG----G-----LRGHEYLARRVTE-----SELVQRSPFMMLAEEVPEAREHM 183 (227)
T ss_dssp EEEBCHHHHHHHHTTGGGCCSSC-EECTT----C-----BTTBCCEEEEECH-----HHHHHSCHHHHHHHHSTTTTTCG
T ss_pred hhhCCHHHHHHHHHhccccCCCc-eECCc----C-----CCCceEEEEEeCh-----HHhccCCHHHHHHHhCCCchhhh
Confidence 999874322 22222 23211 1 2333333444433 2333 36778888887743 3
Q ss_pred C-ceEEEE
Q 018301 278 S-YNLLIS 284 (358)
Q Consensus 278 ~-~Nll~~ 284 (358)
+ |-|.++
T Consensus 184 ~~~glav~ 191 (227)
T 2pof_A 184 GSYGLAMV 191 (227)
T ss_dssp GGEEEEEE
T ss_pred hhceEEEE
Confidence 3 466666
No 31
>4evx_A Putative phage endolysin; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MLY MSE; 1.70A {Salmonella enterica subsp}
Probab=33.78 E-value=44 Score=26.44 Aligned_cols=48 Identities=19% Similarity=0.109 Sum_probs=31.9
Q ss_pred hhcccc-ceeeecChHHHhhcCHHHHHHHHHh--------------ccCCHHHHHHHHHHHHhh
Q 018301 304 LAWECG-GYFLFGSKYEFDQVTEEAIHKRLSA--------------VSLNDEGFQVVKQLCCSI 352 (358)
Q Consensus 304 a~~Ela-G~lv~~r~eDFe~lTee~~~~il~e--------------vslsee~f~~l~~~~~~~ 352 (358)
|.|=++ ||...+.+.. ..+|++++.++|+. +.|++.+|+.|...++.+
T Consensus 31 G~~TIGyGht~~~~~~~-~~iT~~ea~~ll~~dl~~~~~~v~~~v~v~l~q~q~dALvSf~yNv 93 (106)
T 4evx_A 31 GNWVIGYGHMLTPDETL-TFITPDQAEAFLLDDLNSCDILLQNCLPELNDRFQRETLIALMFSI 93 (106)
T ss_dssp SCEEEETTEECCTTCCC-CBCCHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEeeccCCCCCC-CccCHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhHhC
Confidence 344443 6665444333 78899888887752 467788888877777765
No 32
>1swy_A Lysozyme; RB+ binding sites, AB initio direct methods, hydrolase; 1.06A {Enterobacteria phage T4} SCOP: d.2.1.3 PDB: 1swz_A 1sx2_A 1sx7_A 3fad_A 3f9l_A 2nzn_A 3c8s_A 3cdr_A 2nzb_A 3c8q_A 3c7w_A 3cdq_A 3f8v_A 1l34_A 3c7y_A 2lzm_A 1t6h_A* 1lyd_A 3lzm_A 4lzm_A ...
Probab=27.10 E-value=72 Score=26.93 Aligned_cols=32 Identities=13% Similarity=0.133 Sum_probs=23.5
Q ss_pred hhcCHHHHHHHHHh-------------------ccCCHHHHHHHHHHHHhh
Q 018301 321 DQVTEEAIHKRLSA-------------------VSLNDEGFQVVKQLCCSI 352 (358)
Q Consensus 321 e~lTee~~~~il~e-------------------vslsee~f~~l~~~~~~~ 352 (358)
..+|++++.++|+. +.|++.+|+.|...++.+
T Consensus 56 ~~iT~~ea~~ll~~dl~~~~~~v~~~~~~~~~~~~l~q~q~dALvs~~fN~ 106 (164)
T 1swy_A 56 GVITKDEAEKLFNQDVAAAVRGILRNAKLKPVYDSLDAVRECALINMVFQM 106 (164)
T ss_dssp TBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHHHHHHHHHHcC
Confidence 47899988888754 466777777777777665
No 33
>2acm_B Mucin-1; auto-catalytic proteolysis, structural protein; NMR {Homo sapiens}
Probab=26.06 E-value=36 Score=24.41 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhCCcccccCCeeEEEecCCceEEEE
Q 018301 66 LLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQ 101 (358)
Q Consensus 66 ~ll~~We~a~~~glFrY~L~~~~tK~l~G~~~f~aQ 101 (358)
..+.+|.+.+.....||.|+.....+..=.+.+.||
T Consensus 19 ~vk~qf~q~~~~a~~~YnL~IS~vsV~dv~FPsSaq 54 (55)
T 2acm_B 19 DVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQ 54 (55)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEEECC-------
T ss_pred hhhhhhhhhhhhccccccceecceeEEeccCCCcCC
Confidence 468888886665556799998777776555566666
No 34
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=22.89 E-value=49 Score=23.87 Aligned_cols=31 Identities=13% Similarity=0.238 Sum_probs=24.2
Q ss_pred eeecChHHHhhcCHHHHHHHHHhccCCHHHHHH
Q 018301 312 FLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQV 344 (358)
Q Consensus 312 lv~~r~eDFe~lTee~~~~il~evslsee~f~~ 344 (358)
+++|+... .+..-.+.+|++++.++.|+|.+
T Consensus 39 ~~vP~h~~--ei~~g~lk~Ilkqagl~~eef~~ 69 (70)
T 1whz_A 39 VVVPFHSG--ELPKGTFKRILRDAGLTEEEFHN 69 (70)
T ss_dssp EEEECSSS--SCCHHHHHHHHHHTTCCHHHHHH
T ss_pred eEecCCcC--cCCHHHHHHHHHHcCCCHHHHhh
Confidence 45554443 48888999999999999999875
No 35
>2o4w_A Lysozyme; protein folding, protein stability, protein engineering, hydrolase; 1.90A {Enterobacteria phage T4}
Probab=21.57 E-value=1e+02 Score=26.34 Aligned_cols=32 Identities=13% Similarity=0.163 Sum_probs=23.8
Q ss_pred hhcCHHHHHHHHHh-------------------ccCCHHHHHHHHHHHHhh
Q 018301 321 DQVTEEAIHKRLSA-------------------VSLNDEGFQVVKQLCCSI 352 (358)
Q Consensus 321 e~lTee~~~~il~e-------------------vslsee~f~~l~~~~~~~ 352 (358)
..+|++++.++|+. +.|++.+|+.|...++.+
T Consensus 45 ~~iT~~ea~~ll~~Dl~~~~~~v~~~~~~~~~~v~l~q~q~dALvSfafNv 95 (171)
T 2o4w_A 45 GVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM 95 (171)
T ss_dssp TBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHHHHHHHHHHhc
Confidence 47899988888764 466777788777777665
Done!