BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018304
(358 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 177/293 (60%), Gaps = 7/293 (2%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLK-ELK 83
+L F L + A++NFS LG+GGFG VYKG L DG +AVKRL + QG + + +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQ-ERCKILDWSKRFH 142
EV + S HRNL++L G C+ E+LL+Y +M N S+ S + ++ E LDW KR
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
I G+ARG+ YLH +IIHRD+KA+N+LLD++ + DFGLA+ D + +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHVXX 201
Query: 203 VI-GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKK--NRGFYHSDNNLNLIGHAW 259
+ GT G++APEY S G+ S K+DVF +G++LLE+I+G++ + +D+++ L+
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 260 KLWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
L E L+D +QG++ EV + I + LLC Q P +RP M V+ ML
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 175/293 (59%), Gaps = 7/293 (2%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLK-ELK 83
+L F L + A++NF LG+GGFG VYKG L DG +AVKRL + QG + + +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQ-ERCKILDWSKRFH 142
EV + S HRNL++L G C+ E+LL+Y +M N S+ S + ++ E LDW KR
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
I G+ARG+ YLH +IIHRD+KA+N+LLD++ + DFGLA+ D + +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHVXX 193
Query: 203 VI-GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKK--NRGFYHSDNNLNLIGHAW 259
+ G G++APEY S G+ S K+DVF +G++LLE+I+G++ + +D+++ L+
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 260 KLWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
L E L+D +QG++ EV + I + LLC Q P +RP M V+ ML
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 162/289 (56%), Gaps = 9/289 (3%)
Query: 26 LPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 85
+PL +L ATNNF +G G FG VYKG L DG ++A+KR + S QG++E + E
Sbjct: 29 VPLVDLE---EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI-LDWSKRFHII 144
+ S +H +LV L+G C + E +LIY++M N +L ++ + + + W +R I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
G ARG+ YLH + IIHRD+K+ N+LLD++ PKI+DFG+++ G + + + V+
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK-GTELDQTHLXXVV 201
Query: 205 -GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWN 263
GT GY+ PEY G+ + KSDV+SFG++L E++ + +NL A + N
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 264 EGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
G Q++DP + + + + C+ +DRPSM V+ L
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 162/289 (56%), Gaps = 9/289 (3%)
Query: 26 LPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 85
+PL +L ATNNF +G G FG VYKG L DG ++A+KR + S QG++E + E
Sbjct: 29 VPLVDLE---EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI-LDWSKRFHII 144
+ S +H +LV L+G C + E +LIY++M N +L ++ + + + W +R I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
G ARG+ YLH + IIHRD+K+ N+LLD++ PKI+DFG+++ G + + + V+
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK-GTELGQTHLXXVV 201
Query: 205 -GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWN 263
GT GY+ PEY G+ + KSDV+SFG++L E++ + +NL A + N
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 264 EGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
G Q++DP + + + + C+ +DRPSM V+ L
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 134/235 (57%), Gaps = 15/235 (6%)
Query: 15 ENDQIQNIDLELPLFELATIVSATNNFSIN------KKLGQGGFGPVYKGTLVDGQEIAV 68
EN ++ D F + + TNNF K+G+GGFG VYKG V+ +AV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAV 59
Query: 69 KRLSKISEQGLKELKN----EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDS 124
K+L+ + + +ELK E+ + +K QH NLV+LLG G++ L+Y +M N SL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 125 FIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD 184
+ + L W R I G A G+ +LH++ IHRD+K++N+LLD+ KISD
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 185 FGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
FGLARA R++GT YMAPE A G+ + KSD++SFG++LLEII+G
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 134/235 (57%), Gaps = 15/235 (6%)
Query: 15 ENDQIQNIDLELPLFELATIVSATNNFSIN------KKLGQGGFGPVYKGTLVDGQEIAV 68
EN ++ D F + + TNNF K+G+GGFG VYKG V+ +AV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAV 59
Query: 69 KRLSKISEQGLKELKN----EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDS 124
K+L+ + + +ELK E+ + +K QH NLV+LLG G++ L+Y +M N SL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 125 FIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD 184
+ + L W R I G A G+ +LH++ IHRD+K++N+LLD+ KISD
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 185 FGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
FGLARA R++GT YMAPE A G+ + KSD++SFG++LLEII+G
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 130/227 (57%), Gaps = 15/227 (6%)
Query: 23 DLELPLFELATIVSATNNFSIN------KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISE 76
D F + + TNNF K+G+GGFG VYKG V+ +AVK+L+ + +
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 61
Query: 77 QGLKELKN----EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERC 132
+ELK E+ + +K QH NLV+LLG G++ L+Y +M N SL + +
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 133 KILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG 192
L W R I G A G+ +LH++ IHRD+K++N+LLD+ KISDFGLARA
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 193 GDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
R++GT YMAPE A G+ + KSD++SFG++LLEII+G
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 126/221 (57%), Gaps = 15/221 (6%)
Query: 29 FELATIVSATNNFSIN------KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL 82
F + + TNNF K G+GGFG VYKG V+ +AVK+L+ + + +EL
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 83 KN----EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWS 138
K E+ + +K QH NLV+LLG G++ L+Y + N SL + + L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 139 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 198
R I G A G+ +LH++ IHRD+K++N+LLD+ KISDFGLARA
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 199 NTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
R++GT Y APE A G+ + KSD++SFG++LLEII+G
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 29/216 (13%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISE----QGLKELKNEVILFSKLQHRN 96
++ + +G GGFG VY+ + G E+AVK + Q ++ ++ E LF+ L+H N
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCK---ILDWSKRFHIICGTARGVMY 153
++ L G C++ L+ EF L+ + +R +++W+ + ARG+ Y
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNWAVQI------ARGMNY 120
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNP--------KISDFGLARAFGGDETEGNTK-RVI 204
LH ++ + IIHRDLK+SN+L+ Q + KI+DFGLAR E TK
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAA 175
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
G Y +MAPE FS SDV+S+G+LL E+++G+
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 35/294 (11%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRNL 97
+ +I +K+G G FG V++ G ++AVK L + + + E EV + +L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V +G Q ++ E+++ SL + + LD +R + A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
I+HR+LK+ N+L+D+ K+ DFGL+R T ++K GT +MAPE D
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRD 213
Query: 218 GQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPC--- 274
+ KSDV+SFG++L E+ + ++ G NLN P+Q++
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWG------NLN-------------PAQVVAAVGFK 254
Query: 275 ---IQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGS--ETVLPQPKQ 323
++ NL + I G C P RPS +++ +L ++ +P P +
Sbjct: 255 CKRLEIPRNLNPQVAAIIEG--CWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 35/294 (11%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRNL 97
+ +I +K+G G FG V++ G ++AVK L + + + E EV + +L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V +G Q ++ E+++ SL + + LD +R + A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
I+HRDLK+ N+L+D+ K+ DFGL+R +K GT +MAPE D
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX--SKXAAGTPEWMAPEVLRD 213
Query: 218 GQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPC--- 274
+ KSDV+SFG++L E+ + ++ G NLN P+Q++
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWG------NLN-------------PAQVVAAVGFK 254
Query: 275 ---IQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGS--ETVLPQPKQ 323
++ NL + I G C P RPS +++ +L ++ +P P +
Sbjct: 255 CKRLEIPRNLNPQVAAIIEG--CWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR 306
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 103/196 (52%), Gaps = 10/196 (5%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
KKLG G FG V+ G + ++AVK L K ++ E L LQH LV+L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ E +I EFM SL F+ E K+L K A G+ Y+ R IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+NVL+ + + KI+DFGLAR +E T R + + APE + G F++
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGCFTI 189
Query: 223 KSDVFSFGILLLEIIS 238
KS+V+SFGILL EI++
Sbjct: 190 KSNVWSFGILLYEIVT 205
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 103/196 (52%), Gaps = 10/196 (5%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+LG G FG V+ G + ++AVK L K ++ E L LQH LV+L
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ E +I E+M SL F+ E K+L K A G+ Y+ R IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNYIH 133
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+NVL+ + + KI+DFGLAR +E T R + + APE + G F++
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGCFTI 190
Query: 223 KSDVFSFGILLLEIIS 238
KSDV+SFGILL EI++
Sbjct: 191 KSDVWSFGILLYEIVT 206
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 140/285 (49%), Gaps = 29/285 (10%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+LG G FG V+ GT ++A+K L K + E + KL+H LV+L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAV- 72
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ E ++ E+M SL F+ D E + L + A G+ Y+ R+ IH
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIE---RMNYIH 128
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+++N+L+ + KI+DFGLAR +E T R + + APE A G+F++
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEX---TARQGAKFPIKWTAPEAALYGRFTI 185
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQG-SFNL 281
KSDV+SFGILL E+++ K R Y NN ++ E + PC Q +L
Sbjct: 186 KSDVWSFGILLTELVT--KGRVPYPGMNNREVL--------EQVERGYRMPCPQDCPISL 235
Query: 282 AEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
E++ IH C ++ P++RP+ + L +P+ QPG
Sbjct: 236 HELM--IH----CWKKDPEERPTFEYLQSFLEDYFTATEPQYQPG 274
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 109/218 (50%), Gaps = 24/218 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 91
NN K LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-------FDQERCKILDWSKRFHI 143
L QH N+V LLG C G L+I E+ L +F+ D+E + L+ H
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 144 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNT 200
A+G+ +L + IHRD+ A NVLL KI DFGLAR D +GN
Sbjct: 158 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 201 KRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+ + +MAPE D ++V+SDV+S+GILL EI S
Sbjct: 215 RLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 110/221 (49%), Gaps = 26/221 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 91
NN K LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L QH N+V LLG C G L+I E+ L +F+ + + ++L+ F I TA
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTAST 163
Query: 151 VMYLHQDSRL----------RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TE 197
LH S++ IHRD+ A NVLL KI DFGLAR D +
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 198 GNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
GN + + +MAPE D ++V+SDV+S+GILL EI S
Sbjct: 224 GNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 109/218 (50%), Gaps = 24/218 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 91
NN K LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-------FDQERCKILDWSKRFHI 143
L QH N+V LLG C G L+I E+ L +F+ D+E + L+ H
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 144 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNT 200
A+G+ +L + IHRD+ A NVLL KI DFGLAR D +GN
Sbjct: 166 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 201 KRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+ + +MAPE D ++V+SDV+S+GILL EI S
Sbjct: 223 RLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 128 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 238
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 239 ---MEGGLLDKPDNCPDMLLELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 283
Query: 323 QPGY 326
+PG+
Sbjct: 284 EPGF 287
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 86 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 140
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 197
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 198 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 251
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 252 R---------LCWKERPEDRPT 264
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 78 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 189
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 190 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 243
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 244 R---------LCWKERPEDRPT 256
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 84 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 195
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 196 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 249
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 250 R---------LCWKERPEDRPT 262
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 247
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 248 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 292
Query: 323 QPGY 326
+PG+
Sbjct: 293 EPGF 296
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 79 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 133
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 190
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 191 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 244
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 245 R---------LCWKERPEDRPT 257
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 80 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 134
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 191
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 192 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 245
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 246 R---------LCWKERPEDRPT 258
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 87 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 141
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 198
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 199 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 252
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 253 R---------LCWKERPEDRPT 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 129/263 (49%), Gaps = 26/263 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 78 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTI 189
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 190 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 243
Query: 283 EVIRCIHIGLLCVQQHPKDRPSM 305
LC ++ P+DRP+
Sbjct: 244 R---------LCWKERPEDRPTF 257
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 84 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 195
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 196 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 249
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 250 R---------LCWKERPEDRPT 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 83 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 137
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 194
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 195 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 248
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 249 R---------LCWKERPEDRPT 261
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 73 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 127
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 184
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 185 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 238
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 239 R---------LCWKERPEDRPT 251
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 78 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 189
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 190 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 243
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 244 R---------LCWKERPEDRPT 256
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 67 QLYAV-VSEEPIXIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 121
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--YMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 122 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TARQGAKFPIKWTAPEAAL 178
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 179 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 232
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 233 SLHDLM---------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 273
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 88 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 142
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
RDL+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 199
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 200 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 253
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 254 R---------LCWKERPEDRPT 266
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 46 KLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 105
KLGQG FG V+ GT +A+K L K + E + KL+H LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 106 QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 165
E ++ E+M+ SL F+ E K L + + A G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 166 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSVK 223
DL+A+N+L+ +++ K++DFGLAR +E T R + + APE A G+F++K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 224 SDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAE 283
SDV+SFGILL E+ + K R Y N ++ + + P + C + +L
Sbjct: 362 SDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLM- 414
Query: 284 VIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
C ++ P++RP+ + L +P+ QPG
Sbjct: 415 --------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 449
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 70 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 124
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 125 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 181
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 182 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 235
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 236 SLHDLM---------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 276
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 46 KLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 105
KLGQG FG V+ GT +A+K L K + E + KL+H LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 106 QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 165
E ++ E+M+ SL F+ E K L + + A G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 166 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSVK 223
DL+A+N+L+ +++ K++DFGLAR +E T R + + APE A G+F++K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 224 SDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAE 283
SDV+SFGILL E+ + K R Y N ++ + + P + C + +L
Sbjct: 362 SDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLM- 414
Query: 284 VIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
C ++ P++RP+ + L +P+ QPG
Sbjct: 415 --------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 449
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 246
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 247 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 291
Query: 323 QPGY 326
+PG+
Sbjct: 292 EPGF 295
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 109/221 (49%), Gaps = 26/221 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 91
NN K LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L QH N+V LLG C G L+I E+ L +F+ + + ++L+ F I T
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTLST 163
Query: 151 VMYLHQDSRL----------RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TE 197
LH S++ IHRD+ A NVLL KI DFGLAR D +
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 198 GNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
GN + + +MAPE D ++V+SDV+S+GILL EI S
Sbjct: 224 GNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 246
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 247 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 291
Query: 323 QPGY 326
+PG+
Sbjct: 292 EPGF 295
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 253
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 254 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 298
Query: 323 QPGY 326
+PG+
Sbjct: 299 EPGF 302
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 247
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 248 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 292
Query: 323 QPGY 326
+PG+
Sbjct: 293 EPGF 296
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 134 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 244
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 245 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 289
Query: 323 QPGY 326
+PG+
Sbjct: 290 EPGF 293
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 240
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 241 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 285
Query: 323 QPGY 326
+PG+
Sbjct: 286 EPGF 289
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 131/272 (48%), Gaps = 36/272 (13%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
+ + KKLG G FG V+ T ++AVK + K ++ E + LQH LVK
Sbjct: 16 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCK-----ILDWSKRFHIICGTARGVMYL 154
L + E +I EFM SL F+ E K ++D+S + A G+ ++
Sbjct: 75 L-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFI 127
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAP 212
Q + IHRDL+A+N+L+ + KI+DFGLAR +E T R + + AP
Sbjct: 128 EQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWTAP 181
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLID 272
E + G F++KSDV+SFGILL+EI++ R Y +N +I + + P
Sbjct: 182 EAINFGSFTIKSDVWSFGILLMEIVT--YGRIPYPGMSNPEVIRALERGYRMPRPEN--- 236
Query: 273 PCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
C + +N I + C + P++RP+
Sbjct: 237 -CPEELYN---------IMMRCWKNRPEERPT 258
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TARQGAKFPIKWTAPEAAL 188
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 242
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 243 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 165 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 221
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 222 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 275
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 276 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 320
Query: 323 QPGY 326
+PG+
Sbjct: 321 EPGF 324
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 66 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 120
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--YMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 177
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 178 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 231
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 232 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 272
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 68 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 122
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 123 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 179
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 180 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 233
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 234 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 274
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 26/262 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
++LG G FG V+ G ++AVK L + S E L +LQH+ LV+L
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
Q E +I E+M N SL F+ K L +K + A G+ ++ + + IH
Sbjct: 74 TQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 128
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSV 222
R+L+A+N+L+ ++ KI+DFGLAR +E T R + + APE + G F++
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 185
Query: 223 KSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLA 282
KSDV+SFGILL EI++ R Y N +I + + + P D C + + L
Sbjct: 186 KSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLM 239
Query: 283 EVIRCIHIGLLCVQQHPKDRPS 304
LC ++ P+DRP+
Sbjct: 240 R---------LCWKERPEDRPT 252
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 242
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 243 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 242
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 243 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 46 KLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 105
KLGQG FG V+ GT +A+K L K + E + KL+H LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 106 QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 165
E ++ E+M+ SL F+ E K L + + A G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 166 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSVK 223
DL+A+N+L+ +++ K++DFGLAR +E T R + + APE A G+F++K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 224 SDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAE 283
SDV+SFGILL E+ + K R Y N ++ + + P + C + +L
Sbjct: 362 SDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLM- 414
Query: 284 VIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
C ++ P++RP+ + L +P+ QPG
Sbjct: 415 --------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 449
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M SL F+ E K L + + A G+ Y+
Sbjct: 74 QLYAV-VSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVE--- 128
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 185
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 186 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 239
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 240 SLHDLM---------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 46 KLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 105
KLGQG FG V+ GT +A+K L K + E + KL+H LV+L +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVV 331
Query: 106 QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 165
E ++ E+M+ SL F+ E K L + + A G+ Y+ R+ +HR
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 387
Query: 166 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSVK 223
DL+A+N+L+ +++ K++DFGLAR +E T R + + APE A G+F++K
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 224 SDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAE 283
SDV+SFGILL E+ + K R Y N ++ + + P + C + +L
Sbjct: 445 SDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLM- 497
Query: 284 VIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
C ++ P++RP+ + L +P+ QPG
Sbjct: 498 --------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 532
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M SL F+ E K L + + A G+ Y+
Sbjct: 74 QLYAV-VSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVE--- 128
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEW---TARQGAKFPIKWTAPEAAL 185
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 186 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 239
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 240 SLHDLM---------CQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 19/230 (8%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
+N + ++LG+G FG V+ D +AVK L S+ K+ E L + L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI----------LDWSKRFH 142
QH ++VK G C++G+ ++++E+M + L+ F+ + L S+ H
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
I A G++YL + +HRDL N L+ +++ KI DFG++R +
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
+ +M PE +F+ +SDV+S G++L EI + K + S+N +
Sbjct: 190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 242
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 243 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKIL---DWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + E +L SK
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N + +D KI DFG+ R + +
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 240
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 241 ---MEGGLLDKPDNCPDMLLELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 285
Query: 323 QPGY 326
+PG+
Sbjct: 286 EPGF 289
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 36/273 (13%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
+ + KKLG G FG V+ T ++AVK + K ++ E + LQH LVK
Sbjct: 189 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCK-----ILDWSKRFHIICGTARGVMYL 154
L + E +I EFM SL F+ E K ++D+S + A G+ ++
Sbjct: 248 L-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFI 300
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAP 212
Q + IHRDL+A+N+L+ + KI+DFGLAR +E T R + + AP
Sbjct: 301 EQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWTAP 354
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLID 272
E + G F++KSDV+SFGILL+EI++ R Y +N +I + + P
Sbjct: 355 EAINFGSFTIKSDVWSFGILLMEIVT--YGRIPYPGMSNPEVIRALERGYRMPRPEN--- 409
Query: 273 PCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSM 305
C + +N I + C + P++RP+
Sbjct: 410 -CPEELYN---------IMMRCWKNRPEERPTF 432
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + K++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 242
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 243 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ SL F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 132 RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 242
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 243 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 112/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 148
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E N +MA E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 109/231 (47%), Gaps = 37/231 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 91
NN K LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI--------------------FDQE 130
L QH N+V LLG C G L+I E+ L +F+ D+E
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 131 RCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 190
+ L+ H A+G+ +L + IHRD+ A NVLL KI DFGLAR
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 191 FGGDE---TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
D +GN + + +MAPE D ++V+SDV+S+GILL EI S
Sbjct: 208 IMNDSNYIVKGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 167
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMT 250
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 168
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 148
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 149
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ L F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVMEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 242
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 243 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)
Query: 46 KLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 105
KLGQG FG V+ GT +A+K L K + E + KL+H LV+L +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 249
Query: 106 QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 165
E ++ E+M+ SL F+ E K L + + A G+ Y+ R+ +HR
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 166 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDGQFSVK 223
DL+A+N+L+ +++ K++DFGL R +E T R + + APE A G+F++K
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 224 SDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAE 283
SDV+SFGILL E+ + K R Y N ++ + + P + C + +L
Sbjct: 363 SDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLM- 415
Query: 284 VIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
C ++ P++RP+ + L +P+ QPG
Sbjct: 416 --------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQPG 450
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 149
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 146
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 113/204 (55%), Gaps = 13/204 (6%)
Query: 43 INKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNL 97
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 98 VKLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+ LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL-- 147
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEY 214
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 215 ASDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 141
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + KLGQG FG V+ GT +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + E ++ E+M+ L F+ E K L + + A G+ Y+
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYAS 216
R+ +HRDL+A+N+L+ +++ K++DFGLAR +E T R + + APE A
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 188
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
G+F++KSDV+SFGILL E+ + K R Y N ++ + + P + C +
Sbjct: 189 YGRFTIKSDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPE----CPE 242
Query: 277 GSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK-QPG 325
+L C ++ P++RP+ + L +P+ QPG
Sbjct: 243 SLHDLM---------CQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 113/204 (55%), Gaps = 13/204 (6%)
Query: 43 INKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNL 97
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N+
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 98 VKLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+ LLG C++ E L++ +M + L +FI ++ + F + A+G+ YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL-- 144
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEY 214
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 215 ASDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 140/304 (46%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-------FDQERCKILDWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + SK
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 253
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 254 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 298
Query: 323 QPGY 326
+PG+
Sbjct: 299 EPGF 302
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 140/304 (46%), Gaps = 38/304 (12%)
Query: 37 ATNNFSINKKLGQGGFGPVY----KGTLVDGQE--IAVKRLSKISEQGLK-ELKNEVILF 89
A +++++LGQG FG VY KG + D E +A+K +++ + + E NE +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-------FDQERCKILDWSKRFH 142
+ ++V+LLG QG+ L+I E MT L S++ + SK
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ A G+ YL+ + + +HRDL A N ++ +D KI DFG+ R + +
Sbjct: 133 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLW 262
+ +M+PE DG F+ SDV+SFG++L EI + + Y +N ++
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 243
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 322
M L+D L E++R +C Q +PK RPS +I + E
Sbjct: 244 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 288
Query: 323 QPGY 326
+PG+
Sbjct: 289 EPGF 292
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 154
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMT 237
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 27/280 (9%)
Query: 27 PLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEV 86
P +E A V + ++LG G G V+ G ++AVK L + S E
Sbjct: 2 PWWEDAWEVP-RETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 59
Query: 87 ILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICG 146
L +LQH+ LV+L Q E +I E+M N SL F+ K L +K +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQ 117
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGT 206
A G+ ++ + + IHRDL+A+N+L+ ++ KI+DFGLAR E T R
Sbjct: 118 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX---TAREGAK 171
Query: 207 Y--GYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNE 264
+ + APE + G F++KSDV+SFGILL EI++ R Y N +I + + +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRM 229
Query: 265 GMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
P D C + + L LC ++ P+DRP+
Sbjct: 230 VRP----DNCPEELYQLMR---------LCWKERPEDRPT 256
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 142/300 (47%), Gaps = 40/300 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQG----- 78
E P L T+ A N K++G+GGFG V+KG LV D +A+K L +G
Sbjct: 7 EFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 79 --LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILD 136
+E + EV + S L H N+VKL G + ++ EF+ L + D + +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIK 120
Query: 137 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMN----PKISDFGLARAF 191
WS + ++ A G+ Y+ Q+ I+HRDL++ N+ L D N K++DFGL++
Sbjct: 121 WSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-- 177
Query: 192 GGDETEGNTKRVIGTYGYMAPEY--ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSD 249
++ + ++G + +MAPE A + ++ K+D +SF ++L I++G+ Y S
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SY 233
Query: 250 NNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+ I + EG+ + + C N+ E LC PK RP ++
Sbjct: 234 GKIKFIN---MIREEGLRPTIPEDCPPRLRNVIE---------LCWSGDPKKRPHFSYIV 281
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 208
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 20/204 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQE-----IAVKRLSKIS-EQGLKELKNEVILFSKLQHRNLV 98
K LG G FG VYKG V E +A+K L++ + + E +E ++ + + H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGTARGVMYL 154
+LLG C+ +L + + M + L ++ + + +L+W + A+G+MYL
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 156
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
+ R++HRDL A NVL+ + KI+DFGLAR GDE E N +MA E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 215 ASDGQFSVKSDVFSFGILLLEIIS 238
+F+ +SDV+S+G+ + E+++
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 147
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 150
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 149
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 149
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 136/278 (48%), Gaps = 34/278 (12%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 15 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
G + + ++ ++ SL + E + K I TARG+ YLH S
Sbjct: 75 GYSTK-PQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKS--- 128
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---YASDG 218
IIHRDLK++N+ L +D KI DFGLA +++ G+ +MAPE
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 219 QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGS 278
+S +SDV++FGI+L E+++G+ Y + NN + Q+I+ +GS
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRD---------------QIIEMVGRGS 230
Query: 279 F--NLAEV-----IRCIHIGLLCVQQHPKDRPSMPSVI 309
+L++V R + C+++ +RPS P ++
Sbjct: 231 LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVD--GQEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 98
N+ +G+G FG VY GTL+D G++I AVK L++I++ G + + E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 99 KLLGCCIQGE-EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
LLG C++ E L++ +M + L +FI ++ + F + A+G+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 150
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTKRVIGTYGYMAPEYA 215
+ + +HRDL A N +LD+ K++DFGLAR E + N +MA E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 20/204 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQE-----IAVKRLSKIS-EQGLKELKNEVILFSKLQHRNLV 98
K LG G FG VYKG V E +A+K L++ + + E +E ++ + + H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGTARGVMYL 154
+LLG C+ +L + + M + L ++ + + +L+W + A+G+MYL
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 133
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
+ R++HRDL A NVL+ + KI+DFGLAR GDE E N +MA E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 215 ASDGQFSVKSDVFSFGILLLEIIS 238
+F+ +SDV+S+G+ + E+++
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 34/278 (12%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
G + ++ ++ SL + E + K I TARG+ YLH S
Sbjct: 87 GYST-APQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKS--- 140
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---YASDG 218
IIHRDLK++N+ L +D KI DFGLA +++ G+ +MAPE
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 219 QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGS 278
+S +SDV++FGI+L E+++G+ Y + NN + Q+I+ +GS
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRD---------------QIIEMVGRGS 242
Query: 279 F--NLAEV-----IRCIHIGLLCVQQHPKDRPSMPSVI 309
+L++V R + C+++ +RPS P ++
Sbjct: 243 LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 34/279 (12%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 100
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++
Sbjct: 26 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 101 LGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRL 160
+G + + ++ ++ SL + E + K I TARG+ YLH S
Sbjct: 86 MGYSTK-PQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKS-- 140
Query: 161 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---YASD 217
IIHRDLK++N+ L +D KI DFGLA +++ G+ +MAPE
Sbjct: 141 -IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 218 GQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQG 277
+S +SDV++FGI+L E+++G+ Y + NN + Q+I+ +G
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLP---YSNINNRD---------------QIIEMVGRG 241
Query: 278 SF--NLAEV-----IRCIHIGLLCVQQHPKDRPSMPSVI 309
S +L++V R + C+++ +RPS P ++
Sbjct: 242 SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 110/225 (48%), Gaps = 32/225 (14%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQE-----IAVKRLSKISEQGLKE-LKNEVILFSK 91
NN K LG G FG V + T G+E +AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR---------- 140
L QH N+V LLG C G L+I E+ L +F+ ++R L++S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-RRKRPPGLEYSYNPSHNPEEQLS 164
Query: 141 ----FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE- 195
H A+G+ +L + IHRD+ A NVLL KI DFGLAR D
Sbjct: 165 SRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 196 --TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+GN + + +MAPE D ++V+SDV+S+GILL EI S
Sbjct: 222 YIVKGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G FG VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ ++ + + YL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK 128
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 184
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY---- 240
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 241 -------ELMRA------CWQWNPSDRPSFAEI 260
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 113/217 (52%), Gaps = 29/217 (13%)
Query: 45 KKLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 97
++LG+ FG VYKG L Q +A+K L +E L+E ++E +L ++LQH N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIF-----------DQERC--KILDWSKRFHII 144
V LLG + + +I+ + ++ L F+ D +R L+ H++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETE--GNTK 201
A G+ YL S ++H+DL NVL+ +N KISD GL R + D + GN+
Sbjct: 152 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 202 RVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
I +MAPE G+FS+ SD++S+G++L E+ S
Sbjct: 209 LPIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 40/300 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQG----- 78
E P L T+ A N K++G+GGFG V+KG LV D +A+K L +G
Sbjct: 7 EFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 79 --LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILD 136
+E + EV + S L H N+VKL G + ++ EF+ L + D + +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIK 120
Query: 137 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMN----PKISDFGLARAF 191
WS + ++ A G+ Y+ Q+ I+HRDL++ N+ L D N K++DFG ++
Sbjct: 121 WSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-- 177
Query: 192 GGDETEGNTKRVIGTYGYMAPEY--ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSD 249
++ + ++G + +MAPE A + ++ K+D +SF ++L I++G+ Y S
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SY 233
Query: 250 NNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+ I + EG+ + + C N+ E LC PK RP ++
Sbjct: 234 GKIKFIN---MIREEGLRPTIPEDCPPRLRNVIE---------LCWSGDPKKRPHFSYIV 281
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 113/217 (52%), Gaps = 29/217 (13%)
Query: 45 KKLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 97
++LG+ FG VYKG L Q +A+K L +E L+E ++E +L ++LQH N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIF-----------DQERC--KILDWSKRFHII 144
V LLG + + +I+ + ++ L F+ D +R L+ H++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETE--GNTK 201
A G+ YL S ++H+DL NVL+ +N KISD GL R + D + GN+
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 202 RVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
I +MAPE G+FS+ SD++S+G++L E+ S
Sbjct: 192 LPIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI--FDQERCKILDWSKR 140
E + + H N+++L G + + +++ E+M N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGLAR D T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 201 KRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI EF+ SL ++ Q+ + +D K +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ ++ + + YL +
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK 128
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 184
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY---- 240
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 241 -------ELMRA------CWQWNPSDRPSFAEI 260
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 40/300 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQG----- 78
E P L T+ A N K++G+GGFG V+KG LV D +A+K L +G
Sbjct: 7 EFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 79 --LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILD 136
+E + EV + S L H N+VKL G + ++ EF+ L + D + +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIK 120
Query: 137 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQ-DMN----PKISDFGLARAF 191
WS + ++ A G+ Y+ Q+ I+HRDL++ N+ L D N K++DF L++
Sbjct: 121 WSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-- 177
Query: 192 GGDETEGNTKRVIGTYGYMAPEY--ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSD 249
++ + ++G + +MAPE A + ++ K+D +SF ++L I++G+ Y S
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SY 233
Query: 250 NNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+ I + EG+ + + C N+ E LC PK RP ++
Sbjct: 234 GKIKFIN---MIREEGLRPTIPEDCPPRLRNVIE---------LCWSGDPKKRPHFSYIV 281
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 128/271 (47%), Gaps = 42/271 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
+ + KKLG G FG V+ T ++AVK + K ++ E + LQH LVK
Sbjct: 183 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCK-----ILDWSKRFHIICGTARGVMYL 154
L + E +I EFM SL F+ E K ++D+S + A G+ ++
Sbjct: 242 L-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFI 294
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
Q + IHRDL+A+N+L+ + KI+DFGLAR K I + APE
Sbjct: 295 EQRN---YIHRDLRAANILVSASLVCKIADFGLARV--------GAKFPIK---WTAPEA 340
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPC 274
+ G F++KSDV+SFGILL+EI++ R Y +N +I + + P C
Sbjct: 341 INFGSFTIKSDVWSFGILLMEIVT--YGRIPYPGMSNPEVIRALERGYRMPRPEN----C 394
Query: 275 IQGSFNLAEVIRCIHIGLLCVQQHPKDRPSM 305
+ +N I + C + P++RP+
Sbjct: 395 PEELYN---------IMMRCWKNRPEERPTF 416
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 14/218 (6%)
Query: 41 FSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
F + +KLG+G +G VYK + GQ +A+K++ E L+E+ E+ + + ++VK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVK 88
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 159
G + + ++ E+ S+ I + R K L + I+ T +G+ YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 160 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR--VIGTYGYMAPEYASD 217
+R IHRD+KA N+LL+ + + K++DFG+A G T+ KR VIGT +MAPE +
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA----GQLTDXMAKRNXVIGTPFWMAPEVIQE 199
Query: 218 GQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLI 255
++ +D++S GI +E+ GK H + +I
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 135
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 191
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 247
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 248 -------ELMRA------CWQWNPSDRPSFAEI 267
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 71 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 123
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 124 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 135
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 247
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 248 -------ELMRA------CWQWNPSDRPSFAEI 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ ++ + + YL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK 128
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAY 184
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY---- 240
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 241 -------ELMRA------CWQWNPSDRPSFAEI 260
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 13 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 73 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 125
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 126 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 182
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 183 QDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 242
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 243 -------ELMRA------CWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 72
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 73 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 131
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 132 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 187
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 243
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 244 -------ELMRA------CWQWNPSDRPSFAEI 263
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 71 GYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 123
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 124 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 242
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 243 -------ELMRA------CWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 75
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 134
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 135 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 190
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 246
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 247 -------ELMRA------CWQWNPSDRPSFAEI 266
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI--FDQERCKILDWSKR 140
E + + H N+++L G + + +++ E+M N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D T
Sbjct: 150 VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 201 KRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 135
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 247
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 248 -------ELMRA------CWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 84
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 143
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 144 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 199
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 255
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 256 -------ELMRA------CWQWNPSDRPSFAEI 275
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q + +D K +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYL--- 133
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 132
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 188
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 244
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 245 -------ELMRA------CWQWNPSDRPSFAEI 264
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 24/223 (10%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 33 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H N+++L G + + +++ E+M N SLDSF+ + +F
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFT 143
Query: 143 IIC------GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+I G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D
Sbjct: 144 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 200
Query: 197 EGNTKRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 201 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 24/223 (10%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H N+++L G + + +++ E+M N SLDSF+ + +F
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFT 145
Query: 143 IIC------GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+I G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D
Sbjct: 146 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 197 EGNTKRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 76 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 128
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 129 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 24/223 (10%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H N+++L G + + +++ E+M N SLDSF+ + +F
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFT 145
Query: 143 IIC------GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+I G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D
Sbjct: 146 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 197 EGNTKRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 24/223 (10%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H N+++L G + + +++ E+M N SLDSF+ + +F
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFT 145
Query: 143 IIC------GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+I G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D
Sbjct: 146 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 197 EGNTKRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI--FDQERCKILDWSKR 140
E + + H N+++L G + + +++ E+M N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 201 KRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 124/218 (56%), Gaps = 15/218 (6%)
Query: 28 LFELATIVSATN---NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK 83
L +L +IVS + ++ +K+GQG G VY + GQE+A+++++ + +Q KEL
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELI 64
Query: 84 -NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
NE+++ + ++ N+V L + G+E ++ E++ SL + E C +D +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAA 120
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ + + +LH + ++IHRD+K+ N+LL D + K++DFG ++++ +T
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-- 175
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
++GT +MAPE + + K D++S GI+ +E+I G+
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 135
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 247
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 248 -------ELMRA------CWQWNPSDRPSFAEI 267
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 76 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 128
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 129 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 21/231 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKG---TLVDGQE---IAVKRLSKISEQGLKELKNEVILFSKL 92
+ + +LG+G FG V+ L+ Q+ +AVK L + SE ++ + E L + L
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 77
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQ-ERCKI-----------LDWSKR 140
QH+++V+ G C +G L+++E+M + L+ F+ K+ L +
Sbjct: 78 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
+ A G++YL + L +HRDL N L+ Q + KI DFG++R +
Sbjct: 138 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 201 KRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
R + +M PE +F+ +SDV+SFG++L EI + K + S+
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 117/225 (52%), Gaps = 28/225 (12%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 23 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H N+++L G + + +++ E+M N SLDSF+ + +F
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFT 133
Query: 143 IIC------GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+I G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D
Sbjct: 134 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 190
Query: 197 EGNTKRVIG---TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T R G + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 191 AAYTTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 132
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 188
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 244
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 245 -------ELMRA------CWQWNPSDRPSFAEI 264
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 117/225 (52%), Gaps = 28/225 (12%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H N+++L G + + +++ E+M N SLDSF+ + +F
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--------AQFT 116
Query: 143 IIC------GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+I G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D
Sbjct: 117 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 197 EGNTKRVIG---TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T R G + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 174 AAYTTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 38 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 98 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 150
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 151 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 207
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 71 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 123
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 124 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 129
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 21/231 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKG---TLVDGQE---IAVKRLSKISEQGLKELKNEVILFSKL 92
+ + +LG+G FG V+ L+ Q+ +AVK L + SE ++ + E L + L
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 71
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQ-ERCKI-----------LDWSKR 140
QH+++V+ G C +G L+++E+M + L+ F+ K+ L +
Sbjct: 72 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
+ A G++YL + L +HRDL N L+ Q + KI DFG++R +
Sbjct: 132 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 201 KRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
R + +M PE +F+ +SDV+SFG++L EI + K + S+
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 239
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 134
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ ++ + + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK 135
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 247
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 248 -------ELMRA------CWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ ++ + + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 242
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 243 -------ELMRA------CWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ ++ + + YL +
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 242
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 243 -------ELMRA------CWQWNPSDRPSFAEI 262
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 161
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 99 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 151
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 152 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 128
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 22/271 (8%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ ++ + + YL +
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 218 GQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQG 277
+FS+KSDV++FG+LL EI + + S + ++L + + + C +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 240
Query: 278 SFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
+ L C Q +P DRPS +
Sbjct: 241 VYELMRA---------CWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 22/271 (8%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ ++ + + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 218 GQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQG 277
+FS+KSDV++FG+LL EI + + S + ++L + + + C +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 240
Query: 278 SFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
+ L C Q +P DRPS +
Sbjct: 241 VYELMRA---------CWQWNPSDRPSFAEI 262
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 16/219 (7%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI--FDQERCKILDWSKR 140
E + + H N+++L G + + +++ E+M N SLDSF+ D + I +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI----QL 149
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
++ G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL R D T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 201 KRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 136
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 31 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 91 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 143
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 144 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 200
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 135
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 72
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 131
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD T + APE +
Sbjct: 132 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAY 187
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 243
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 244 -------ELMRA------CWQWNPSDRPSFAEI 263
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 132
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD T + APE +
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAY 188
Query: 218 GQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWN-EGMPSQLIDPCI 275
+FS+KSDV++FG+LL EI + G L+ +++ EG P ++
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---- 244
Query: 276 QGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
E++R C Q +P DRPS +
Sbjct: 245 -------ELMRA------CWQWNPSDRPSFAEI 264
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 137
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 17/206 (8%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ +++G G FG VYKG + + ++ + Q L+ KNEV + K +H N++ +
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF----DQERCKILDWSKRFHIICGTARGVMYLHQD 157
G + + ++ ++ SL + E K++D +++ TA+G+ YLH
Sbjct: 99 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLHAK 151
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE---Y 214
S IIHRDLK++N+ L +D+ KI DFGLA +++ G+ +MAPE
Sbjct: 152 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+S +SDV++FGI+L E+++G+
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 21/231 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKG---TLVDGQE---IAVKRLSKISEQGLKELKNEVILFSKL 92
+ + +LG+G FG V+ L+ Q+ +AVK L + SE ++ + E L + L
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQ-ERCKI-----------LDWSKR 140
QH+++V+ G C +G L+++E+M + L+ F+ K+ L +
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
+ A G++YL + L +HRDL N L+ Q + KI DFG++R +
Sbjct: 161 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 201 KRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
R + +M PE +F+ +SDV+SFG++L EI + K + S+
Sbjct: 218 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 268
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAV-KRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 105
LG+G FG K T + E+ V K L + E+ + EV + L+H N++K +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 106 QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHR 165
+ + I E++ +L I + WS+R A G+ YLH + IIHR
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 166 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR------------VIGTYGYMAPE 213
DL + N L+ ++ N ++DFGLAR ++T+ R V+G +MAPE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 214 YASDGQFSVKSDVFSFGILLLEII 237
+ + K DVFSFGI+L EII
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 32/281 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
+ + +++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPK 63
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
LV+L G C++ L++EFM + L ++ Q + + G+ YL +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEE 121
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
S +IHRDL A N L+ ++ K+SDFG+ R D+ +T + +PE S
Sbjct: 122 AS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 177
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNL---IGHAWKLWNEGMPSQLIDP 273
++S KSDV+SFG+L+ E+ S K Y + +N + I ++L+ + S +
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLASTHV-- 233
Query: 274 CIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGS 314
I C ++ P+DRP+ ++ L +
Sbjct: 234 --------------YQIMNHCWKERPEDRPAFSRLLRQLAA 260
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 123/220 (55%), Gaps = 19/220 (8%)
Query: 28 LFELATIVSATN---NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK 83
L +L +IVS + ++ +K+GQG G VY + GQE+A+++++ + +Q KEL
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELI 64
Query: 84 -NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
NE+++ + ++ N+V L + G+E ++ E++ SL + E C +D +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAA 120
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ + + +LH + ++IHRD+K+ N+LL D + K++DFG F T +KR
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKR 173
Query: 203 --VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
++GT +MAPE + + K D++S GI+ +E+I G+
Sbjct: 174 SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 123/220 (55%), Gaps = 19/220 (8%)
Query: 28 LFELATIVSATN---NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK 83
L +L +IVS + ++ +K+GQG G VY + GQE+A+++++ + +Q KEL
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELI 64
Query: 84 -NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
NE+++ + ++ N+V L + G+E ++ E++ SL + E C +D +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAA 120
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ + + +LH + ++IHRD+K+ N+LL D + K++DFG F T +KR
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKR 173
Query: 203 --VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
++GT +MAPE + + K D++S GI+ +E+I G+
Sbjct: 174 SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 24/223 (10%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H N+++L G + + +++ E M N SLDSF+ + +F
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--------AQFT 145
Query: 143 IIC------GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+I G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D
Sbjct: 146 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 197 EGNTKRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 123/220 (55%), Gaps = 19/220 (8%)
Query: 28 LFELATIVSATN---NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK 83
L +L +IVS + ++ +K+GQG G VY + GQE+A+++++ + +Q KEL
Sbjct: 7 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELI 65
Query: 84 -NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
NE+++ + ++ N+V L + G+E ++ E++ SL + E C +D +
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAA 121
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ + + +LH + ++IHRD+K+ N+LL D + K++DFG F T +KR
Sbjct: 122 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKR 174
Query: 203 --VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
++GT +MAPE + + K D++S GI+ +E+I G+
Sbjct: 175 SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 24/223 (10%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H N+++L G + + +++ E M N SLDSF+ + +F
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--------AQFT 145
Query: 143 IIC------GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+I G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D
Sbjct: 146 VIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 197 EGNTKRVIG-TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T R + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 29/284 (10%)
Query: 31 LATIV-SATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGL-KELKNE 85
LAT + +F + LG+G F VY+ ++ G E+A+K + K + + G+ + ++NE
Sbjct: 2 LATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
V + +L+H ++++L L+ E N ++ ++ + R K ++ H +
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMH 119
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG 205
G++YLH I+HRDL SN+LL ++MN KI+DFGLA + T + G
Sbjct: 120 QIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCG 174
Query: 206 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
T Y++PE A+ ++SDV+S G + ++ G+ N LN + L +
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV----VLADYE 230
Query: 266 MPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
MPS L I+ + +++R ++P DR S+ SV+
Sbjct: 231 MPSFL---SIEAKDLIHQLLR----------RNPADRLSLSSVL 261
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 116/225 (51%), Gaps = 28/225 (12%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKG--TLVDGQEI--AVKRLS-KISEQGLKEL 82
+ E A + ATN SI+K +G G FG V G L +EI A+K L +E+ ++
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H N+++L G + + +++ E M N SLDSF+ + +F
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--------AQFT 116
Query: 143 IIC------GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+I G A G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D
Sbjct: 117 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 197 EGNTKRVIG---TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T R G + +PE + +F+ SDV+S+GI+L E++S
Sbjct: 174 AAYTTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHRDL N+L++ + KI DFGL + D+ K + APE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 23/213 (10%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKL 92
+ I K +G G G V G L V GQ +A+K L + +E+ ++ +E + +
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE-RCKILDWSKRFHIICGTARGV 151
H N+++L G +G +++ E+M N SLD+F+ + + I+ + ++ G G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGM 164
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--- 208
YL S L +HRDL A NVL+D ++ K+SDFGL+R D T T G
Sbjct: 165 RYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT-----TTGGKI 216
Query: 209 ---YMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+ APE + FS SDV+SFG+++ E+++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 13/204 (6%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
N+ + K +G+G F V ++ G+E+A+K + K ++ L++L EV + L H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+VKL + LI E+ + + ++ R K + +F I V Y HQ
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---AVQYCHQ 129
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
RI+HRDLKA N+LLD DMN KI+DFG + F G G+ Y APE
Sbjct: 130 K---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDTFCGSPPYAAPELFQ 183
Query: 217 DGQFS-VKSDVFSFGILLLEIISG 239
++ + DV+S G++L ++SG
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 21/218 (9%)
Query: 33 TIVSATN------NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELK 83
+I SAT+ N+ + K +G+G F V ++ G+E+AVK + K ++ L++L
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHI 143
EV + L H N+VKL + L+ E+ + + ++ R K + +F
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 122
Query: 144 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KR 202
I V Y HQ I+HRDLKA N+LLD DMN KI+DFG + F T GN
Sbjct: 123 IVS---AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF----TVGNKLDT 172
Query: 203 VIGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIISG 239
G+ Y APE ++ + DV+S G++L ++SG
Sbjct: 173 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 114/198 (57%), Gaps = 12/198 (6%)
Query: 45 KKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLLG 102
+K+GQG G VY + GQE+A+++++ + +Q KEL NE+++ + ++ N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ G+E ++ E++ SL + E C +D + + + + +LH + ++
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCRECLQALEFLHSN---QV 138
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSV 222
IHR++K+ N+LL D + K++DFG ++++ +T ++GT +MAPE + +
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGP 196
Query: 223 KSDVFSFGILLLEIISGK 240
K D++S GI+ +E+I G+
Sbjct: 197 KVDIWSLGIMAIEMIEGE 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 23/213 (10%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKL 92
+ I K +G G G V G L V GQ +A+K L + +E+ ++ +E + +
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE-RCKILDWSKRFHIICGTARGV 151
H N+++L G +G +++ E+M N SLD+F+ + + I+ + ++ G G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGM 164
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--- 208
YL S L +HRDL A NVL+D ++ K+SDFGL+R D T T G
Sbjct: 165 RYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT-----TTGGKI 216
Query: 209 ---YMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+ APE + FS SDV+SFG+++ E+++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 22/270 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NLV
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 276
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL + +
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKN 335
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
IHR+L A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 336 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 391
Query: 219 QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGS 278
+FS+KSDV++FG+LL EI + + S + ++L + + + C +
Sbjct: 392 KFSIKSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV 445
Query: 279 FNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
+ E++R C Q +P DRPS +
Sbjct: 446 Y---ELMRA------CWQWNPSDRPSFAEI 466
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 29/292 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQ-----EIAVKRL-SKISEQGLKELKNEVILFSKLQHRNLV 98
K +G G FG VYKG L +A+K L + +E+ + E + + H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L G + + ++I E+M N +LD F+ +E+ + ++ G A G+ YL +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKYL---A 164
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASD 217
+ +HRDL A N+L++ ++ K+SDFGL+R D E T + APE S
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 218 GQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQG 277
+F+ SDV+SFGI++ E+++ R ++ N+ K N+G C
Sbjct: 225 RKFTSASDVWSFGIVMWEVMT-YGERPYWELSNH-----EVMKAINDGFRLPTPMDCPSA 278
Query: 278 SFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAD 329
+ L + C QQ RP ++ +L + ++ P LAD
Sbjct: 279 IYQLM---------MQCWQQERARRPKFADIVSIL--DKLIRAPDSLKTLAD 319
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 15/205 (7%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
N+ + K +G+G F V ++ G+E+A+K + K ++ L++L EV + L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
+VKL I+ E+ L LI E+ + + ++ R K + +F I V Y H
Sbjct: 76 IVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---AVQYCH 131
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
Q RI+HRDLKA N+LLD DMN KI+DFG + F G G Y APE
Sbjct: 132 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDAFCGAPPYAAPELF 185
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
++ + DV+S G++L ++SG
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 13/200 (6%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISE-QGLKELK-NEVILFSKLQHRNLVKLLG 102
+K+G+G +G VYK G+ +A+KR+ +E +G+ E+ L +L H N+V L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 103 CCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
I E L L++EFM K L + D+ + + D + ++ RGV + HQ R
Sbjct: 87 V-IHSERCLTLVFEFM-EKDLKK-VLDENKTGLQDSQIKIYLY-QLLRGVAHCHQH---R 139
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY-ASDGQF 220
I+HRDLK N+L++ D K++DFGLARAF G T V+ T Y AP+ ++
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKY 197
Query: 221 SVKSDVFSFGILLLEIISGK 240
S D++S G + E+I+GK
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 13/200 (6%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISE-QGLKELK-NEVILFSKLQHRNLVKLLG 102
+K+G+G +G VYK G+ +A+KR+ +E +G+ E+ L +L H N+V L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 103 CCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
I E L L++EFM K L + D+ + + D + ++ RGV + HQ R
Sbjct: 87 V-IHSERCLTLVFEFM-EKDLKK-VLDENKTGLQDSQIKIYLY-QLLRGVAHCHQH---R 139
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY-ASDGQF 220
I+HRDLK N+L++ D K++DFGLARAF G T V+ T Y AP+ ++
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKY 197
Query: 221 SVKSDVFSFGILLLEIISGK 240
S D++S G + E+I+GK
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 36/278 (12%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
++ ++G G FG VYKG + + ++ + + + +NEV + K +H N++ +G
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQER----CKILDWSKRFHIICGTARGVMYLHQDS 158
+ + ++ ++ SL + QE +++D +++ TA+G+ YLH +
Sbjct: 100 YMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ------TAQGMDYLHAKN 152
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLA----RAFGGDETEGNTKRVIGTYGYMAPE- 213
IIHRD+K++N+ L + + KI DFGLA R G + E T V+ +MAPE
Sbjct: 153 ---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL----WMAPEV 205
Query: 214 --YASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
+ FS +SDV+S+GI+L E+++G+ + H +N +I + + S+L
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTGE--LPYSHINNRDQIIFMVGRGYASPDLSKLY 263
Query: 272 DPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
C + L CV++ ++RP P ++
Sbjct: 264 KNCPKAMKRLVAD---------CVKKVKEERPLFPQIL 292
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 22/233 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
+ + ++LG+G FG V+ D +AVK L + K+ + E L + L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI-------------LDWSK 139
QH ++VK G C G+ ++++E+M + L+ F+ + L S+
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 140 RFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 199
HI A G++YL + +HRDL N L+ ++ KI DFG++R +
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 200 TKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
+ +M PE +F+ +SDV+SFG++L EI + K F S+ +
Sbjct: 192 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 32/280 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
+ + +++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPK 61
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
LV+L G C++ L++EFM + L ++ Q + + G+ YL +
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEE 119
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
+IHRDL A N L+ ++ K+SDFG+ R D+ +T + +PE S
Sbjct: 120 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 175
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNL---IGHAWKLWNEGMPSQLIDP 273
++S KSDV+SFG+L+ E+ S K Y + +N + I ++L+ + S +
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLASTHV-- 231
Query: 274 CIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLG 313
I C ++ P+DRP+ ++ L
Sbjct: 232 --------------YQIMNHCWKERPEDRPAFSRLLRQLA 257
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 22/271 (8%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQ-EIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 278
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ ++ + + YL +
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK 337
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHR+L A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 338 N---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 393
Query: 218 GQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQG 277
+FS+KSDV++FG+LL EI + + S + ++L + + + C +
Sbjct: 394 NKFSIKSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 447
Query: 278 SFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
+ E++R C Q +P DRPS +
Sbjct: 448 VY---ELMRA------CWQWNPSDRPSFAEI 469
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 108/201 (53%), Gaps = 7/201 (3%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQ-EIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY+G +AVK L + + + ++E E + +++H NL
Sbjct: 259 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 317
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C + +I EFMT +L ++ + R ++ + ++ + + YL +
Sbjct: 318 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKK 376
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHR+L A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 377 N---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 432
Query: 218 GQFSVKSDVFSFGILLLEIIS 238
+FS+KSDV++FG+LL EI +
Sbjct: 433 NKFSIKSDVWAFGVLLWEIAT 453
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 45 KKLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++LG+G FG V L D G+ +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 100 LLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
G C G L LI E++ SL ++ Q+ + +D K +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 131
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYAS 216
R IHR+L N+L++ + KI DFGL + D+ K + APE +
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
+ +FSV SDV+SFG++L E+ +
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 32/280 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
+ + +++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPK 63
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
LV+L G C++ L++EFM + L ++ Q + + G+ YL +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEE 121
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
+IHRDL A N L+ ++ K+SDFG+ R D+ +T + +PE S
Sbjct: 122 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 177
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNL---IGHAWKLWNEGMPSQLIDP 273
++S KSDV+SFG+L+ E+ S K Y + +N + I ++L+ + S +
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLASTHV-- 233
Query: 274 CIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLG 313
I C ++ P+DRP+ ++ L
Sbjct: 234 --------------YQIMNHCWKERPEDRPAFSRLLRQLA 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 32/280 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
+ + +++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPK 66
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
LV+L G C++ L++EFM + L ++ Q + + G+ YL +
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEE 124
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
+IHRDL A N L+ ++ K+SDFG+ R D+ +T + +PE S
Sbjct: 125 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 180
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNL---IGHAWKLWNEGMPSQLIDP 273
++S KSDV+SFG+L+ E+ S K Y + +N + I ++L+ + S +
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLASTHV-- 236
Query: 274 CIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLG 313
I C ++ P+DRP+ ++ L
Sbjct: 237 --------------YQIMNHCWRERPEDRPAFSRLLRQLA 262
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
L H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 91 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+M PE +G F+ K+D +SFG+LL EI S
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
L H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+M PE +G F+ K+D +SFG+LL EI S
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 48/287 (16%)
Query: 43 INKKLGQGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 97
I K +G G FG V G L V G+ +A+K L + +++ ++ +E + + H N+
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC------GTARGV 151
+ L G + + ++I E+M N SLD+F+ + RF +I G G+
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKND--------GRFTVIQLVGMLRGIGSGM 144
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG-TYGYM 210
YL S + +HRDL A N+L++ ++ K+SDFG++R D T R +
Sbjct: 145 KYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 201
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
APE + +F+ SDV+S+GI++ E++S G++ W+ M +Q
Sbjct: 202 APEAIAYRKFTSASDVWSYGIVMWEVMSYGER------------------PYWD--MSNQ 241
Query: 270 LIDPCIQGSFNLAEVIRC---IHIGLL-CVQQHPKDRPSMPSVILML 312
+ I+ + L + C +H +L C Q+ DRP ++ ML
Sbjct: 242 DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 16/229 (6%)
Query: 43 INKKLGQGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 97
I + +G G FG V G L + G+ +A+K L S +E+ ++ +E + + H N+
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE-RCKILDWSKRFHIICGTARGVMYLHQ 156
+ L G + ++I EFM N SLDSF+ + + ++ + ++ G A G+ YL
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL-- 151
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG---TYGYMAPE 213
+ + +HRDL A N+L++ ++ K+SDFGL+R D ++ +G + APE
Sbjct: 152 -ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKL 261
+F+ SDV+S+GI++ E++S G++ + + +N I ++L
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL 259
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 48/287 (16%)
Query: 43 INKKLGQGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 97
I K +G G FG V G L V G+ +A+K L + +++ ++ +E + + H N+
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC------GTARGV 151
+ L G + + ++I E+M N SLD+F+ + RF +I G G+
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKND--------GRFTVIQLVGMLRGIGSGM 129
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG-TYGYM 210
YL S + +HRDL A N+L++ ++ K+SDFG++R D T R +
Sbjct: 130 KYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 186
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
APE + +F+ SDV+S+GI++ E++S G++ W+ M +Q
Sbjct: 187 APEAIAYRKFTSASDVWSYGIVMWEVMSYGER------------------PYWD--MSNQ 226
Query: 270 LIDPCIQGSFNLAEVIRC---IHIGLL-CVQQHPKDRPSMPSVILML 312
+ I+ + L + C +H +L C Q+ DRP ++ ML
Sbjct: 227 DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 46/286 (16%)
Query: 43 INKKLGQGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 97
I K +G G FG V G L V G+ +A+K L + +++ ++ +E + + H N+
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC------GTARGV 151
+ L G + + ++I E+M N SLD+F+ + RF +I G G+
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKND--------GRFTVIQLVGMLRGIGSGM 123
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG-TYGYM 210
YL S + +HRDL A N+L++ ++ K+SDFG++R D T R +
Sbjct: 124 KYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 180
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQL 270
APE + +F+ SDV+S+GI++ E++S + W+ M +Q
Sbjct: 181 APEAIAYRKFTSASDVWSYGIVMWEVMSYGER-----------------PYWD--MSNQD 221
Query: 271 IDPCIQGSFNLAEVIRC---IHIGLL-CVQQHPKDRPSMPSVILML 312
+ I+ + L + C +H +L C Q+ DRP ++ ML
Sbjct: 222 VIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
N+ + K +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+VKL + L+ E+ + + ++ R K + +F I V Y HQ
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQ 131
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEYA 215
I+HRDLKA N+LLD DMN KI+DFG + F T GN G+ Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELF 184
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
++ + DV+S G++L ++SG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 132/280 (47%), Gaps = 32/280 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
+ + +++G G FG V+ G ++ ++A+K + + +SE E + EV++ KL H
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE-EAEVMM--KLSHPK 83
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
LV+L G C++ L++EFM + L ++ Q + + G+ YL +
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEE 141
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
+IHRDL A N L+ ++ K+SDFG+ R D+ +T + +PE S
Sbjct: 142 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 197
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNL---IGHAWKLWNEGMPSQLIDP 273
++S KSDV+SFG+L+ E+ S K Y + +N + I ++L+ + S +
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLASTHV-- 253
Query: 274 CIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLG 313
I C ++ P+DRP+ ++ L
Sbjct: 254 --------------YQIMNHCWKERPEDRPAFSRLLRQLA 279
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
N+ + K +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+VKL + L+ E+ + + ++ R K + +F I V Y HQ
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQ 131
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEYA 215
I+HRDLKA N+LLD DMN KI+DFG + F T GN G+ Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELF 184
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
++ + DV+S G++L ++SG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 117/214 (54%), Gaps = 16/214 (7%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELK-NEVILFSKL 92
+S+++ F +KLG G + VYKG G +A+K + SE+G E+ L +L
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 93 QHRNLVKLLGCCIQGEEKL-LIYEFMTN---KSLDS-FIFDQERCKILDWSKRFHIICGT 147
+H N+V+L I E KL L++EFM N K +DS + + R L+ K F
Sbjct: 61 KHENIVRLYDV-IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ--WQL 117
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
+G+ + H++ +I+HRDLK N+L+++ K+ DFGLARAFG +++ V T
Sbjct: 118 LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TL 172
Query: 208 GYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGK 240
Y AP+ + +S D++S G +L E+I+GK
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 43/290 (14%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 72 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF--GGDETEGNTKR 202
A G YL ++ IHRD+ A N LL KI DFG+AR G +G
Sbjct: 191 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 247
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGF--YHSDNNLNLIGHAWK 260
+ +M PE +G F+ K+D +SFG+LL EI S G+ Y S +N ++
Sbjct: 248 L--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTS 301
Query: 261 LWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVIL 310
P P + I C Q P+DRP+ ++IL
Sbjct: 302 GGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNF-AIIL 337
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRL---SKISEQGLKELKNEVILFSKLQHR 95
NF I KK+G+G F VY+ L+DG +A+K++ + + + E+ L +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI--FDQERCKILDWS--KRFHIICGTARGV 151
N++K I+ E ++ E L I F +++ I + + K F +C
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE-- 150
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
H SR R++HRD+K +NV + K+ D GL R F T ++ ++GT YM+
Sbjct: 151 ---HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMS 204
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
PE + ++ KSD++S G LL E+ + + FY + +NL K+ P
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQS--PFY--GDKMNLYSLCKKIEQCDYPPL-- 258
Query: 272 DPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
P S L +++ +C+ P+ RP + V
Sbjct: 259 -PSDHYSEELRQLVN------MCINPDPEKRPDVTYV 288
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 31 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+M PE +G F+ K+D +SFG+LL EI S
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 23 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 142 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 198
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+M PE +G F+ K+D +SFG+LL EI S
Sbjct: 199 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 31 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+M PE +G F+ K+D +SFG+LL EI S
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 125/288 (43%), Gaps = 39/288 (13%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 38 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 97 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 157 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 213
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGF--YHSDNNLNLIGHAWKLW 262
+M PE +G F+ K+D +SFG+LL EI S G+ Y S +N ++
Sbjct: 214 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSGG 269
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVIL 310
P P + I C Q P+DRP+ ++IL
Sbjct: 270 RMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNF-AIIL 303
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 125/288 (43%), Gaps = 39/288 (13%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 58 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 177 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 233
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGF--YHSDNNLNLIGHAWKLW 262
+M PE +G F+ K+D +SFG+LL EI S G+ Y S +N ++
Sbjct: 234 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSGG 289
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVIL 310
P P + I C Q P+DRP+ ++IL
Sbjct: 290 RMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNF-AIIL 323
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 125/288 (43%), Gaps = 39/288 (13%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGF--YHSDNNLNLIGHAWKLW 262
+M PE +G F+ K+D +SFG+LL EI S G+ Y S +N ++
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSGG 263
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVIL 310
P P + I C Q P+DRP+ ++IL
Sbjct: 264 RMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNF-AIIL 297
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 125/288 (43%), Gaps = 39/288 (13%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 48 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 167 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 223
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGF--YHSDNNLNLIGHAWKLW 262
+M PE +G F+ K+D +SFG+LL EI S G+ Y S +N ++
Sbjct: 224 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSGG 279
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVIL 310
P P + I C Q P+DRP+ ++IL
Sbjct: 280 RMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNF-AIIL 313
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+M PE +G F+ K+D +SFG+LL EI S
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 32/280 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
+ + +++G G FG V+ G ++ ++A+K R +SE+ E + EV++ KL H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPK 64
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
LV+L G C++ L+ EFM + L ++ Q + + G+ YL +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEE 122
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
+IHRDL A N L+ ++ K+SDFG+ R D+ +T + +PE S
Sbjct: 123 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 178
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNL---IGHAWKLWNEGMPSQLIDP 273
++S KSDV+SFG+L+ E+ S K Y + +N + I ++L+ + S +
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSEVVEDISTGFRLYKPRLASTHV-- 234
Query: 274 CIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLG 313
I C ++ P+DRP+ ++ L
Sbjct: 235 --------------YQIMNHCWRERPEDRPAFSRLLRQLA 260
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 43/290 (14%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 49 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF--GGDETEGNTKR 202
A G YL ++ IHRD+ A N LL KI DFG+AR G +G
Sbjct: 168 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 224
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGF--YHSDNNLNLIGHAWK 260
+ +M PE +G F+ K+D +SFG+LL EI S G+ Y S +N ++
Sbjct: 225 L--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTS 278
Query: 261 LWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVIL 310
P P + I C Q P+DRP+ ++IL
Sbjct: 279 GGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNF-AIIL 314
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
N+ + K +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+VKL + L+ E+ + + ++ R K + +F I V Y HQ
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQ 131
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEYA 215
I+HRDLKA N+LLD DMN KI+DFG + F T GN G Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELF 184
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
++ + DV+S G++L ++SG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 125/288 (43%), Gaps = 39/288 (13%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+AR +
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGF--YHSDNNLNLIGHAWKLW 262
+M PE +G F+ K+D +SFG+LL EI S G+ Y S +N ++
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSGG 277
Query: 263 NEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVIL 310
P P + I C Q P+DRP+ ++IL
Sbjct: 278 RMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNF-AIIL 311
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
N+ + K +G+G F V ++ G+E+AV+ + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+VKL + L+ E+ + + ++ R K + +F I V Y HQ
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQ 131
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEYA 215
I+HRDLKA N+LLD DMN KI+DFG + F T GN G+ Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDEFCGSPPYAAPELF 184
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
++ + DV+S G++L ++SG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 24/208 (11%)
Query: 48 GQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQG 107
+G FG V+K L++ + +AVK + I ++ + + EV ++H N+++ +G +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVK-IFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 108 E----EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD------ 157
+ LI F SL F+ + ++ W++ HI ARG+ YLH+D
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 158 -SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
+ I HRD+K+ NVLL ++ I+DFGLA F ++ G+T +GT YMAPE
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VL 205
Query: 217 DGQFSVKSDVF------SFGILLLEIIS 238
+G + + D F + G++L E+ S
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 24/243 (9%)
Query: 46 KLGQGGFGPV-YKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+G+G G V G+++AVK + +Q + L NEV++ QH N+V++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC-GTARGVMYLHQDSRLRII 163
+ GEE ++ EF+ +L I Q R ++ +C + + YLH +I
Sbjct: 112 LVGEELWVLMEFLQGGALTD-IVSQVRLN----EEQIATVCEAVLQALAYLHAQG---VI 163
Query: 164 HRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
HRD+K+ ++LL D K+SDFG D + K ++GT +MAPE S ++ +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATE 221
Query: 224 SDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAE 283
D++S GI+++E++ G+ Y SD+ + A K + P P ++ S ++
Sbjct: 222 VDIWSLGIMVIEMVDGEPP---YFSDSPV----QAMKRLRDSPP-----PKLKNSHKVSP 269
Query: 284 VIR 286
V+R
Sbjct: 270 VLR 272
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
NT +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 43 INKKLGQGGFGPVYKGTL-VDGQE---IAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
I + +G G FG V +G L G++ +A+K L +E+ +E +E + + +H N+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFI-FDQERCKILDWSKRFHIICGTARGVMYLHQ 156
++L G +++ EFM N +LDSF+ + + ++ + ++ G A G+ YL +
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE 136
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG---TYGYMAPE 213
+ +HRDL A N+L++ ++ K+SDFGL+R + ++ +G + APE
Sbjct: 137 ---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLID 272
+ +F+ SD +S+GI++ E++S G++ + + +N I ++L
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL----------P 243
Query: 273 PCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
P +L +++ L C Q+ RP P V+ L
Sbjct: 244 PPPDCPTSLHQLM------LDCWQKDRNARPRFPQVVSAL 277
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
N+ + K +G+G F V ++ G+E+AV+ + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+VKL + L+ E+ + + ++ R K + +F I V Y HQ
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQ 131
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEYA 215
I+HRDLKA N+LLD DMN KI+DFG + F T GN G+ Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELF 184
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
++ + DV+S G++L ++SG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 43 INKKLGQGGFGPVYKGTL-VDGQE---IAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
I + +G G FG V +G L G++ +A+K L +E+ +E +E + + +H N+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFI-FDQERCKILDWSKRFHIICGTARGVMYLHQ 156
++L G +++ EFM N +LDSF+ + + ++ + ++ G A G+ YL +
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE 134
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG---TYGYMAPE 213
+ +HRDL A N+L++ ++ K+SDFGL+R + ++ +G + APE
Sbjct: 135 ---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLID 272
+ +F+ SD +S+GI++ E++S G++ + + +N I ++L
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL----------P 241
Query: 273 PCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
P +L +++ L C Q+ RP P V+ L
Sbjct: 242 PPPDCPTSLHQLM------LDCWQKDRNARPRFPQVVSAL 275
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 34/271 (12%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEI-AVKRLS---KISEQGLKELKNEVILFSKLQHRN 96
FS +++G G FG VY V E+ A+K++S K S + +++ EV KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
++ GC ++ L+ E+ + D ++ + ++ + H G +G+ YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHS 172
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY-- 214
+ +IHRD+KA N+LL + K+ DFG A +GT +MAPE
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 223
Query: 215 -ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDP 273
+GQ+ K DV+S GI +E ++ +K F N+N + + + +Q P
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIE-LAERKPPLF-----NMNAMSALYHI------AQNESP 271
Query: 274 CIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
+Q S + +E R C+Q+ P+DRP+
Sbjct: 272 ALQ-SGHWSEYFRNFVDS--CLQKIPQDRPT 299
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 34/271 (12%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEI-AVKRLS---KISEQGLKELKNEVILFSKLQHRN 96
FS +++G G FG VY V E+ A+K++S K S + +++ EV KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
++ GC ++ L+ E+ + D ++ + ++ + H G +G+ YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHS 133
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY-- 214
+ +IHRD+KA N+LL + K+ DFG A +GT +MAPE
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVIL 184
Query: 215 -ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDP 273
+GQ+ K DV+S GI +E ++ +K F N+N + + + +Q P
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIE-LAERKPPLF-----NMNAMSALYHI------AQNESP 232
Query: 274 CIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
+Q S + +E R C+Q+ P+DRP+
Sbjct: 233 ALQ-SGHWSEYFRNFVDS--CLQKIPQDRPT 260
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 43 INKKLGQGGFGPVYKGTL-VDGQE---IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 97
I + +G G FG V G L + G+ +A+K L S +E+ ++ +E + + H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC------GTARGV 151
+ L G + ++I EFM N SLDSF+ + +F +I G A G+
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQND--------GQFTVIQLVGMLRGIAAGM 122
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG---TYG 208
YL + + +HR L A N+L++ ++ K+SDFGL+R D ++ +G
Sbjct: 123 KYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 179
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+ APE +F+ SDV+S+GI++ E++S
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 138 SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQ-------EIAVKRLSKI-SEQGLKELKNEVILFSK 91
N ++ + LG G FG VY+G V G ++AVK L ++ SEQ + E ++ SK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGT 147
H+N+V+ +G +Q + ++ E M L SF+ + + L H+
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVI 204
A G YL ++ IHRD+ A N LL KI DFG+A+ +
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAM 207
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+M PE +G F+ K+D +SFG+LL EI S
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 21/206 (10%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSKLQHRN 96
+ I +LG G FG VYK +E +V +K+ SE+ L++ E+ + + H N
Sbjct: 39 WEIIGELGDGAFGKVYKAQ---NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICG-TARGVMYLH 155
+VKLL ++ EF ++D+ + + ER + ++C T + YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLH 152
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY- 214
+ +IIHRDLKA N+L D + K++DFG++ T IGT +MAPE
Sbjct: 153 DN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQRRDSFIGTPYWMAPEVV 207
Query: 215 ----ASDGQFSVKSDVFSFGILLLEI 236
+ D + K+DV+S GI L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+ ++ KLG G +G VY G +AVK L + + + ++E E + +++H NL
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 90
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+LLG C ++ E+M +L ++ + R ++ ++ + + YL +
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVLLYMATQISSAMEYLEKK 149
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ IHRDL A N L+ ++ K++DFGL+R GD + + APE +
Sbjct: 150 N---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 205
Query: 218 GQFSVKSDVFSFGILLLEIIS 238
FS+KSDV++FG+LL EI +
Sbjct: 206 NTFSIKSDVWAFGVLLWEIAT 226
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
+ + +G+G FG V K +++A+K++ SE+ K E+ S++ H N+VKL G
Sbjct: 13 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 69
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
C+ L+ E+ SL + + E + ++GV YLH +
Sbjct: 70 ACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 163 IHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFS 221
IHRDLK N+LL KI DFG A T N K G+ +MAPE +S
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT--NNK---GSAAWMAPEVFEGSNYS 182
Query: 222 VKSDVFSFGILLLEIISGKK 241
K DVFS+GI+L E+I+ +K
Sbjct: 183 EKCDVFSWGIILWEVITRRK 202
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 41 FSINKKLGQGGFGPVYKGTL-VDGQE---IAVKRLS-KISEQGLKELKNEVILFSKLQHR 95
+I + +G G FG V G L + G+ +A+K L +E+ ++ E + + H
Sbjct: 24 ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC------GTAR 149
N++ L G + + +++ E+M N SLD+F+ + +F +I G +
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND--------GQFTVIQLVGMLRGISA 135
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG-TYG 208
G+ YL S + +HRDL A N+L++ ++ K+SDFGL+R D T R
Sbjct: 136 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
+ APE + +F+ SDV+S+GI++ E++S R ++ M +
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVS-YGERPYWE------------------MTN 233
Query: 269 QLIDPCIQGSFNLAEVIRC----IHIGLLCVQQHPKDRPSMPSVILML 312
Q + ++ + L + C + L C Q+ RP ++ ML
Sbjct: 234 QDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
+ + +G+G FG V K +++A+K++ SE+ K E+ S++ H N+VKL G
Sbjct: 12 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 68
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
C+ L+ E+ SL + + E + ++GV YLH +
Sbjct: 69 ACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 163 IHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFS 221
IHRDLK N+LL KI DFG A T N K G+ +MAPE +S
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT--NNK---GSAAWMAPEVFEGSNYS 181
Query: 222 VKSDVFSFGILLLEIISGKK 241
K DVFS+GI+L E+I+ +K
Sbjct: 182 EKCDVFSWGIILWEVITRRK 201
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 39 NNFSINKKLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 96
+ + +++G+G FG V+ G L D +AVK + LK + E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE---RCKILDWSKRFHIICGTARGVMY 153
+V+L+G C Q + ++ E + +F+ + R K L ++ A G+ Y
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAAGMEY 228
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTKRVIGTYGYMA 211
L IHRDL A N L+ + KISDFG++R A G G ++V + A
Sbjct: 229 LESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV--PVKWTA 283
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIIS 238
PE + G++S +SDV+SFGILL E S
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 33/212 (15%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSKLQHRN 96
+ I +LG G FG VYK +E +V +K+ SE+ L++ E+ + + H N
Sbjct: 39 WEIIGELGDGAFGKVYKAQ---NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICG-TARGVMYLH 155
+VKLL ++ EF ++D+ + + ER + ++C T + YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLH 152
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV------IGTYGY 209
+ +IIHRDLKA N+L D + K++DFG++ NT+ + IGT +
Sbjct: 153 DN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--------NTRXIQRRDXFIGTPYW 201
Query: 210 MAPEY-----ASDGQFSVKSDVFSFGILLLEI 236
MAPE + D + K+DV+S GI L+E+
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 33/212 (15%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSKLQHRN 96
+ I +LG G FG VYK +E +V +K+ SE+ L++ E+ + + H N
Sbjct: 39 WEIIGELGDGAFGKVYKAQ---NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICG-TARGVMYLH 155
+VKLL ++ EF ++D+ + + ER + ++C T + YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLH 152
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV------IGTYGY 209
+ +IIHRDLKA N+L D + K++DFG++ NT+ + IGT +
Sbjct: 153 DN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--------NTRXIQRRDSFIGTPYW 201
Query: 210 MAPEY-----ASDGQFSVKSDVFSFGILLLEI 236
MAPE + D + K+DV+S GI L+E+
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKIS 75
E P +EL + + K LG+G FG V + ++AVK L S +
Sbjct: 19 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 76 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-------- 126
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ + +L ++
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 127 ---FDQERCKILDWSKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPK 181
F+ S + + C ARG+ YL + + IHRDL A NVL+ +D K
Sbjct: 134 EFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190
Query: 182 ISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
I+DFGLAR + T +MAPE D ++ +SDV+SFG+LL EI +
Sbjct: 191 IADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 29 FELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVIL 88
+L+ + F + + +G G +G VYKG V ++A ++ ++ +E+K E+ +
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 89 FSKL-QHRNLVKLLGCCIQ------GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRF 141
K HRN+ G I+ ++ L+ EF S+ I + + L
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIA 132
Query: 142 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTK 201
+I RG+ +LHQ ++IHRD+K NVLL ++ K+ DFG++ D T G
Sbjct: 133 YICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRN 187
Query: 202 RVIGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIISG 239
IGT +MAPE + D + KSD++S GI +E+ G
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
N+ + K +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+VKL + L+ E+ + + ++ K + +F I V Y HQ
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS---AVQYCHQ 124
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEYA 215
I+HRDLKA N+LLD DMN KI+DFG + F T GN G+ Y APE
Sbjct: 125 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELF 177
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
++ + DV+S G++L ++SG
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 39 NNFSINKKLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 96
+ + +++G+G FG V+ G L D +AVK + LK + E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE---RCKILDWSKRFHIICGTARGVMY 153
+V+L+G C Q + ++ E + +F+ + R K L ++ A G+ Y
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAAGMEY 228
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTKRVIGTYGYMA 211
L IHRDL A N L+ + KISDFG++R A G G ++V + A
Sbjct: 229 LESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV--PVKWTA 283
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIIS 238
PE + G++S +SDV+SFGILL E S
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 34/283 (12%)
Query: 45 KKLGQGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
++LGQG FG VY+G ++ G+ +AVK +++ S + E NE + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR--------FHIICGTAR 149
V+LLG +G+ L++ E M + L S++ R + + R + A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ YL+ + +HRDL A N ++ D KI DFG+ R + + + +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
MAPE DG F+ SD++SFG++L EI S + Y +N ++ K +G
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVL----KFVMDGGYLD 252
Query: 270 LIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
D C + R + +C Q +PK RP+ ++ +L
Sbjct: 253 QPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 30/272 (11%)
Query: 42 SINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
++ K+LG G FG V G ++AVK + + S E E KL H LVK
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFY 69
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
G C + ++ E+++N L +++ + K L+ S+ + G+ +L +
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLESH---Q 124
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGT---YGYMAPEYASDG 218
IHRDL A N L+D+D+ K+SDFG+ R D+ + +GT + APE
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFHYF 180
Query: 219 QFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQG 277
++S KSDV++FGIL+ E+ S GK Y + + + +L+ + S I
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTI------ 234
Query: 278 SFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
I C + P+ RP+ ++
Sbjct: 235 ----------YQIMYSCWHELPEKRPTFQQLL 256
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 34/283 (12%)
Query: 45 KKLGQGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
++LGQG FG VY+G ++ G+ +AVK +++ S + E NE + ++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR--------FHIICGTAR 149
V+LLG +G+ L++ E M + L S++ R + + R + A
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ YL+ + +HRDL A N ++ D KI DFG+ R + + + +
Sbjct: 139 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
MAPE DG F+ SD++SFG++L EI S + Y +N ++ K +G
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVL----KFVMDGGYLD 249
Query: 270 LIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
D C + R + +C Q +PK RP+ ++ +L
Sbjct: 250 QPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 40/245 (16%)
Query: 24 LELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQE----IAVKRLSK-ISE 76
LE P +E N + K LG+G FG V K T + G+ +AVK L + S
Sbjct: 13 LEDPKWEFPR-----KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 77 QGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERC---- 132
L++L +E + ++ H +++KL G C Q LLI E+ SL F+ + +
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 133 ---------KILDWSKRFHIICG--------TARGVMYLHQDSRLRIIHRDLKASNVLLD 175
LD + G ++G+ YL + ++++HRDL A N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 176 QDMNPKISDFGLARAFGGDETEGNTKRVIG--TYGYMAPEYASDGQFSVKSDVFSFGILL 233
+ KISDFGL+R E + KR G +MA E D ++ +SDV+SFG+LL
Sbjct: 185 EGRKMKISDFGLSRDVY--EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 234 LEIIS 238
EI++
Sbjct: 243 WEIVT 247
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 56/291 (19%)
Query: 43 INKKLGQGGFGPVYKGTL-VDGQE---IAVKRLS-KISEQGLKELKNEVILFSKLQHRNL 97
I + +G G FG V G L + G+ +A+K L +E+ ++ E + + H N+
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNV 106
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC------GTARGV 151
V L G +G+ +++ EFM N +LD+F+ + +F +I G A G+
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD--------GQFTVIQLVGMLRGIAAGM 158
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--- 208
YL + + +HRDL A N+L++ ++ K+SDFGL+R E + + V T G
Sbjct: 159 RYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI-----EDDPEAVYTTTGGKI 210
Query: 209 ---YMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
+ APE +F+ SDV+S+GI++ E++S + W+
Sbjct: 211 PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER-----------------PYWD-- 251
Query: 266 MPSQLIDPCIQGSFNLAEVIRC---IHIGLL-CVQQHPKDRPSMPSVILML 312
M +Q + I+ + L + C +H +L C Q+ +RP ++ +L
Sbjct: 252 MSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 40/245 (16%)
Query: 24 LELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQE----IAVKRLSK-ISE 76
LE P +E N + K LG+G FG V K T + G+ +AVK L + S
Sbjct: 13 LEDPKWEFPR-----KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 77 QGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERC---- 132
L++L +E + ++ H +++KL G C Q LLI E+ SL F+ + +
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 133 ---------KILDWSKRFHIICG--------TARGVMYLHQDSRLRIIHRDLKASNVLLD 175
LD + G ++G+ YL + ++++HRDL A N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 176 QDMNPKISDFGLARAFGGDETEGNTKRVIG--TYGYMAPEYASDGQFSVKSDVFSFGILL 233
+ KISDFGL+R E + KR G +MA E D ++ +SDV+SFG+LL
Sbjct: 185 EGRKMKISDFGLSRDVY--EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 234 LEIIS 238
EI++
Sbjct: 243 WEIVT 247
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 KKLGQGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
++LGQG FG VY+G ++ G+ +AVK +++ S + E NE + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR--------FHIICGTAR 149
V+LLG +G+ L++ E M + L S++ R + + R + A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ YL+ + +HRDL A N ++ D KI DFG+ R + + + +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIIS 238
MAPE DG F+ SD++SFG++L EI S
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ +I+DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 96
N+ + K +G+G F V ++ G+E+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+VKL + L+ E+ + + ++ R K + +F I V Y HQ
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS---AVQYCHQ 131
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEYA 215
I+HRDLKA N+LLD D N KI+DFG + F T GN G Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADXNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELF 184
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
++ + DV+S G++L ++SG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 46 KLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+G+G G V T G+++AVK++ +Q + L NEV++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC-GTARGVMYLHQDSRLRII 163
+ G+E ++ EF+ +L + + ++ +C R + YLH +I
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIATVCLSVLRALSYLHNQG---VI 163
Query: 164 HRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
HRD+K+ ++LL D K+SDFG + + K ++GT +MAPE S + +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTE 221
Query: 224 SDVFSFGILLLEIISGK 240
D++S GI+++E+I G+
Sbjct: 222 VDIWSLGIMVIEMIDGE 238
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 13/205 (6%)
Query: 41 FSINKKLGQGGFGPVY--KGTLVDGQEIAVKRL---SKISEQGLKELKNEVILFSKLQHR 95
+ I KLG GG VY + T+++ + +A+K + + E+ LK + EV S+L H+
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
N+V ++ + + L+ E++ +L +I E L + G+ + H
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
+RI+HRD+K N+L+D + KI DFG+A+A + + T V+GT Y +PE A
Sbjct: 129 D---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYFSPEQA 184
Query: 216 SDGQFSVKSDVFSFGILLLEIISGK 240
+D++S GI+L E++ G+
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 147 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 142 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I E+ + +L ++ +D R
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 144 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKIS 75
E P +EL + + K LG+G FG V + ++AVK L S +
Sbjct: 4 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 58
Query: 76 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI 134
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ + +L ++ R
Sbjct: 59 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPG 117
Query: 135 LDW------------SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 180
L++ S + + C ARG+ YL + + IHRDL A NVL+ +D
Sbjct: 118 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 174
Query: 181 KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
KI+DFGLAR + T +MAPE D ++ +SDV+SFG+LL EI +
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKIS 75
E P +EL + + K LG+G FG V + ++AVK L S +
Sbjct: 12 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 66
Query: 76 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI 134
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ + +L ++ R
Sbjct: 67 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPG 125
Query: 135 LDWS------------KRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 180
L++S + + C ARG+ YL + + IHRDL A NVL+ +D
Sbjct: 126 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 182
Query: 181 KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
KI+DFGLAR + T +MAPE D ++ +SDV+SFG+LL EI +
Sbjct: 183 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKIS 75
E P +EL + + K LG+G FG V + ++AVK L S +
Sbjct: 8 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 62
Query: 76 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI 134
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ + +L ++ R
Sbjct: 63 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPG 121
Query: 135 LDWS------------KRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 180
L++S + + C ARG+ YL + + IHRDL A NVL+ +D
Sbjct: 122 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 178
Query: 181 KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
KI+DFGLAR + T +MAPE D ++ +SDV+SFG+LL EI +
Sbjct: 179 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKIS 75
E P +EL + + K LG+G FG V + ++AVK L S +
Sbjct: 19 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 76 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI 134
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ + +L ++ R
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPG 132
Query: 135 LDWS------------KRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 180
L++S + + C ARG+ YL + + IHRDL A NVL+ +D
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 189
Query: 181 KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
KI+DFGLAR + T +MAPE D ++ +SDV+SFG+LL EI +
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKIS 75
E P +EL + + K LG+G FG V + ++AVK L S +
Sbjct: 19 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 76 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI 134
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ + +L ++ R
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPG 132
Query: 135 LDW------------SKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 180
L++ S + + C ARG+ YL + + IHRDL A NVL+ +D
Sbjct: 133 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 189
Query: 181 KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
KI+DFGLAR + T +MAPE D ++ +SDV+SFG+LL EI +
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + + L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKIS 75
E P +EL + + K LG+G FG V + ++AVK L S +
Sbjct: 11 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 65
Query: 76 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI 134
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ + +L ++ R
Sbjct: 66 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPG 124
Query: 135 LDWS------------KRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP 180
L++S + + C ARG+ YL + + IHRDL A NVL+ +D
Sbjct: 125 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVM 181
Query: 181 KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
KI+DFGLAR + T +MAPE D ++ +SDV+SFG+LL EI +
Sbjct: 182 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 46 KLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+G+G G V T+ G+ +AVK++ +Q + L NEV++ QH N+V++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ G+E ++ EF+ +L + ++ + + + + LH +IH
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKS 224
RD+K+ ++LL D K+SDFG + K ++GT +MAPE S + +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 225 DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQL-----IDPCIQG 277
D++S GI+++E++ G+ Y ++ L A K+ + +P +L + P ++G
Sbjct: 207 DIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRLKNLHKVSPSLKG 257
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 46 KLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+G+G G V T+ G+ +AVK++ +Q + L NEV++ QH N+V++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ G+E ++ EF+ +L + ++ + + + + LH +IH
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKS 224
RD+K+ ++LL D K+SDFG + K ++GT +MAPE S + +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 225 DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQL-----IDPCIQG 277
D++S GI+++E++ G+ Y ++ L A K+ + +P +L + P ++G
Sbjct: 209 DIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRLKNLHKVSPSLKG 259
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 40/245 (16%)
Query: 24 LELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQE----IAVKRLSK-ISE 76
LE P +E N + K LG+G FG V K T + G+ +AVK L + S
Sbjct: 13 LEDPKWEFPR-----KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 77 QGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERC---- 132
L++L +E + ++ H +++KL G C Q LLI E+ SL F+ + +
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 133 ---------KILDWSKRFHIICG--------TARGVMYLHQDSRLRIIHRDLKASNVLLD 175
LD + G ++G+ YL + + ++HRDL A N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVA 184
Query: 176 QDMNPKISDFGLARAFGGDETEGNTKRVIG--TYGYMAPEYASDGQFSVKSDVFSFGILL 233
+ KISDFGL+R E + KR G +MA E D ++ +SDV+SFG+LL
Sbjct: 185 EGRKMKISDFGLSRDVY--EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 234 LEIIS 238
EI++
Sbjct: 243 WEIVT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 41/262 (15%)
Query: 1 MRFQLILSNISEKTENDQIQNIDLELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTL 60
+ FQ +L+ +SE + ++ ELP + + K LG+G FG V
Sbjct: 44 LYFQGMLAGVSEY---ELPEDPRWELP----------RDRLVLGKPLGEGAFGQVVLAEA 90
Query: 61 VD--------GQEIAVKRL-SKISEQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEK 110
+ ++AVK L S +E+ L +L +E+ + + +H+N++ LLG C Q
Sbjct: 91 IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 150
Query: 111 LLIYEFMTNKSLDSFIFDQERCKILDWS------------KRFHIICG--TARGVMYLHQ 156
+I E+ + +L ++ R L++S + + C ARG+ YL
Sbjct: 151 YVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-- 207
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
+ + IHRDL A NVL+ +D KI+DFGLAR + T +MAPE
Sbjct: 208 -ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 266
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
D ++ +SDV+SFG+LL EI +
Sbjct: 267 DRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 46 KLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+G+G G V T+ G+ +AVK++ +Q + L NEV++ QH N+V++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ G+E ++ EF+ +L + ++ + + + + LH +IH
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKS 224
RD+K+ ++LL D K+SDFG + K ++GT +MAPE S + +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 225 DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQL-----IDPCIQG 277
D++S GI+++E++ G+ Y ++ L A K+ + +P +L + P ++G
Sbjct: 202 DIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRLKNLHKVSPSLKG 252
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 46 KLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+G+G G V T+ G+ +AVK++ +Q + L NEV++ QH N+V++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ G+E ++ EF+ +L + ++ + + + + LH +IH
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKS 224
RD+K+ ++LL D K+SDFG + K ++GT +MAPE S + +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 225 DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQL-----IDPCIQG 277
D++S GI+++E++ G+ Y ++ L A K+ + +P +L + P ++G
Sbjct: 252 DIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRLKNLHKVSPSLKG 302
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 31/237 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKIS 75
E P +EL + + K LG+G FG V + ++AVK L S +
Sbjct: 19 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 76 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI 134
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ + +L ++ +E +
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGL 133
Query: 135 L-----------DWSKRFHIICG--TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPK 181
S + + C ARG+ YL + + IHRDL A NVL+ +D K
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190
Query: 182 ISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
I+DFGLAR + T +MAPE D ++ +SDV+SFG+LL EI +
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 46 KLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+G+G G V T+ G+ +AVK++ +Q + L NEV++ QH N+V++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ G+E ++ EF+ +L + ++ + + + + LH +IH
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKS 224
RD+K+ ++LL D K+SDFG + K ++GT +MAPE S + +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 225 DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQL-----IDPCIQG 277
D++S GI+++E++ G+ Y ++ L A K+ + +P +L + P ++G
Sbjct: 198 DIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRLKNLHKVSPSLKG 248
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 34/283 (12%)
Query: 45 KKLGQGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
++LGQG FG VY+G ++ G+ +AVK +++ S + E NE + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR--------FHIICGTAR 149
V+LLG +G+ L++ E M + L S++ R + + R + A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ YL+ + +HRDL A N ++ D KI DFG+ R + + + +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
MAPE DG F+ SD++SFG++L EI S + Y +N ++ K +G
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVL----KFVMDGGYLD 252
Query: 270 LIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
D C + R + +C Q +PK RP+ ++ +L
Sbjct: 253 QPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQE----IAVKRLSKISE-QGLKELKNEVILFSKLQHRNLV 98
++ +G+G FG VY G +D + A+K LS+I+E Q ++ E +L L H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 99 KLLGCCIQGEE-KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
L+G + E ++ +M + L FI +R + F + ARG+ YL +
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYLAEQ 143
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTKRVIGTYGYMAPEYA 215
+ +HRDL A N +LD+ K++DFGLAR E + + + A E
Sbjct: 144 ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ KSDV+SFG+LL E+++
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 130/309 (42%), Gaps = 55/309 (17%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD------GQEIAVKRLSKISEQGLKE-LKNEVILFSKL 92
N K LG G FG V T ++AVK L + ++ +E L +E+ + ++L
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 93 -QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIF--------------------DQER 131
H N+V LLG C LI+E+ L +++ ++E
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 132 CKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 191
+L + A+G+ +L S +HRDL A NVL+ KI DFGLAR
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 192 GGDE---TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKN--RGFY 246
D GN + + +MAPE +G +++KSDV+S+GILL EI S N G
Sbjct: 223 MSDSNYVVRGNARLPVK---WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279
Query: 247 HSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMP 306
N LI + +K+ ++ I +Q C + RPS P
Sbjct: 280 VDANFYKLIQNGFKMDQPFYATEEIYIIMQS----------------CWAFDSRKRPSFP 323
Query: 307 SVILMLGSE 315
++ LG +
Sbjct: 324 NLTSFLGCQ 332
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 46 KLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
K+G+G G V T+ G+ +AVK++ +Q + L NEV++ QH N+V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ G+E ++ EF+ +L + ++ + + + + LH +IH
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKS 224
RD+K+ ++LL D K+SDFG + K ++GT +MAPE S + +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 225 DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQL-----IDPCIQG 277
D++S GI+++E++ G+ Y ++ L A K+ + +P +L + P ++G
Sbjct: 329 DIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRLKNLHKVSPSLKG 379
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 62
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 34/283 (12%)
Query: 45 KKLGQGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
++LGQG FG VY+G ++ G+ +AVK +++ S + E NE + ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR--------FHIICGTAR 149
V+LLG +G+ L++ E M + L S++ R + + R + A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ YL+ + +HRDL A N ++ D KI DFG+ R + + + +
Sbjct: 141 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
MAPE DG F+ SD++SFG++L EI S + Y +N ++ K +G
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVL----KFVMDGGYLD 251
Query: 270 LIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
D C + R + +C Q +PK RP+ ++ +L
Sbjct: 252 QPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I + + +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL C Q +EKL + N L +I FD E C RF+
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 147
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 148 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 15/200 (7%)
Query: 46 KLGQGGFGPVYKGTLVDGQ---EIAVKRLSKISEQG-LKELKNEVILFSKLQHRNLVKLL 101
+LG G FG V +G + ++A+K L + +E+ +E+ E + +L + +V+L+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF-DQERCKILDWSKRFHIICGTARGVMYLHQDSRL 160
G C Q E +L+ E L F+ +E + + ++ H + + G+ YL + +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMKYLEEKN-- 130
Query: 161 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY--GYMAPEYASDG 218
+HRDL A NVLL KISDFGL++A G D++ T R G + + APE +
Sbjct: 131 -FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAPECINFR 188
Query: 219 QFSVKSDVFSFGILLLEIIS 238
+FS +SDV+S+G+ + E +S
Sbjct: 189 KFSSRSDVWSYGVTMWEALS 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 33/229 (14%)
Query: 39 NNFSINKKLGQGGFGPVYKGT---LVDGQE---IAVKRLSKISEQGLK-ELKNEVILFSK 91
NN + +G+G FG V++ L+ + +AVK L + + ++ + + E L ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE--------------RCKI--- 134
+ N+VKLLG C G+ L++E+M L+ F+ R ++
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 135 ----LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR- 189
L +++ I A G+ YL S + +HRDL N L+ ++M KI+DFGL+R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 190 AFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+ D + + I +M PE +++ +SDV+++G++L EI S
Sbjct: 224 IYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 25/209 (11%)
Query: 48 GQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQG 107
+G FG V+K L++ +AVK +Q + + E+ ++H NL++ + +G
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 108 E----EKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD------ 157
E LI F SL ++ + I+ W++ H+ +RG+ YLH+D
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 158 --SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
+ I HRD K+ NVLL D+ ++DFGLA F + G+T +GT YMAPE
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
Query: 216 SDGQFSVKSDVF------SFGILLLEIIS 238
+G + + D F + G++L E++S
Sbjct: 198 -EGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 141/283 (49%), Gaps = 23/283 (8%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQE-IAVKRLS-KISEQGLKELKNEVILFSKLQHRN 96
+++ + + +G G V +E +A+KR++ + + + EL E+ S+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFD-----QERCKILDWSKRFHIICGTARGV 151
+V + +E L+ + ++ S+ I + + +LD S I+ G+
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTKRV-IGTYG 208
YLH++ + IHRD+KA N+LL +D + +I+DFG++ A GGD T ++ +GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 209 YMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
+MAPE + + K+D++SFGI +E+ +G YH + ++ L N+ P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGA---APYHKYPPMKVL--MLTLQNDP-P 245
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGL-LCVQQHPKDRPSMPSVI 309
S ++ +Q L + + + LC+Q+ P+ RP+ ++
Sbjct: 246 S--LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 141/283 (49%), Gaps = 23/283 (8%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQE-IAVKRLS-KISEQGLKELKNEVILFSKLQHRN 96
+++ + + +G G V +E +A+KR++ + + + EL E+ S+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFD-----QERCKILDWSKRFHIICGTARGV 151
+V + +E L+ + ++ S+ I + + +LD S I+ G+
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTKRV-IGTYG 208
YLH++ + IHRD+KA N+LL +D + +I+DFG++ A GGD T ++ +GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 209 YMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
+MAPE + + K+D++SFGI +E+ +G YH + ++ L N+ P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP---YHKYPPMKVL--MLTLQNDP-P 240
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGL-LCVQQHPKDRPSMPSVI 309
S ++ +Q L + + + LC+Q+ P+ RP+ ++
Sbjct: 241 S--LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G +G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 34/283 (12%)
Query: 45 KKLGQGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
++LGQG FG VY+G ++ G+ +AVK +++ S + E NE + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR--------FHIICGTAR 149
V+LLG +G+ L++ E M + L S++ R + + R + A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ YL+ + +HRDL A N ++ D KI DFG+ R + + +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
MAPE DG F+ SD++SFG++L EI S + Y +N ++ K +G
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVL----KFVMDGGYLD 252
Query: 270 LIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 312
D C + R + +C Q +PK RP+ ++ +L
Sbjct: 253 QPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 90
+ ++ K LG+G FG V + + +AVK L + + + L +E+ IL
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 91 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQ--ERCKILDWSKRF----HI 143
H N+V LLG C + G ++I EF +L +++ + E D K F H+
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 144 ICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 147 ICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 201 KRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
+ +G+G FG V G G ++AVK + ++ + E + ++L+H NLV+LLG
Sbjct: 18 QTIGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 105 IQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRII 163
++ + L ++ E+M SL ++ + R +L + YL ++ +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FV 130
Query: 164 HRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
HRDL A NVL+ +D K+SDFGL + + G + APE + FS K
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREAAFSTK 185
Query: 224 SDVFSFGILLLEIIS 238
SDV+SFGILL EI S
Sbjct: 186 SDVWSFGILLWEIYS 200
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 123 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKLQHRNL 97
++ + + LG+G +G V V + +AVK + K + + +K E+ + L H N+
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
VK G +G + L E+ + L I D + FH + GV+YLH
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG- 121
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
+ I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+APE
Sbjct: 122 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 218 GQFSVKS-DVFSFGILLLEIISGK 240
+F + DV+S GI+L +++G+
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 45 KKLGQGGFGPVYKGTLV-DGQEIAVKRLSKI-----SEQGLKELKNEVILFSKLQHRNLV 98
K LG G FG VYKG + DG+ + + K+ S + KE+ +E + + + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERC---KILDWSKRFHIICGTARGVMYLH 155
+LLG C+ +L+ LD ++ R +L+W + A+G+ YL
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLE 136
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
+R++HRDL A NVL+ + KI+DFGLAR DETE + +MA E
Sbjct: 137 D---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 216 SDGQFSVKSDVFSFGILLLEIIS 238
+F+ +SDV+S+G+ + E+++
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 38 TNNFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLSK--ISEQGLKE-LKNEVILFSKLQ 93
++ + + LG+G FG V + GQE AVK +SK + ++ KE L EV L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++KL L+ E T L I ++R +D ++ II G+ Y
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITY 141
Query: 154 LHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+H++ +I+HRDLK N+LL+ +D N +I DFGL+ F E K IGT Y+
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 195
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE G + K DV+S G++L ++SG
Sbjct: 196 APEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 8 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 66
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 67 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 125
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 126 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 176
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 177 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 12 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 70
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 71 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 129
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 130 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 180
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 181 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 38 TNNFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLSK--ISEQGLKE-LKNEVILFSKLQ 93
++ + + LG+G FG V + GQE AVK +SK + ++ KE L EV L +L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++KL L+ E T L I ++R +D ++ II G+ Y
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITY 147
Query: 154 LHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+H++ +I+HRDLK N+LL+ +D N +I DFGL+ F E K IGT Y+
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 201
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE G + K DV+S G++L ++SG
Sbjct: 202 APE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 3 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 120
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 121 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 171
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 172 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 3 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYL 120
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 121 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 171
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 172 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 123 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 6 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 64
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 65 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 123
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 124 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 174
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 175 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 172
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 127 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
+ +G+G FG V G G ++AVK + ++ + E + ++L+H NLV+LLG
Sbjct: 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 105 IQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRII 163
++ + L ++ E+M SL ++ + R +L + YL ++ +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FV 124
Query: 164 HRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
HRDL A NVL+ +D K+SDFGL + + G + APE + +FS K
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFSTK 179
Query: 224 SDVFSFGILLLEIIS 238
SDV+SFGILL EI S
Sbjct: 180 SDVWSFGILLWEIYS 194
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 172
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV--------DGQEIAVKRL-SKISEQGLKELKNEVILF 89
+ ++ K LG+G FG V V + +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----------FDQERCKILDW 137
+ +H+N++ LLG C Q +I + + +L ++ +D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 138 SKRFHIICGT--ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ + + C ARG+ YL + + IHRDL A NVL+ ++ KI+DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
T +MAPE D ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 123 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYL 119
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 38 TNNFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLSK--ISEQGLKE-LKNEVILFSKLQ 93
++ + + LG+G FG V + GQE AVK +SK + ++ KE L EV L +L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++KL L+ E T L I ++R +D ++ II G+ Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITY 164
Query: 154 LHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+H++ +I+HRDLK N+LL+ +D N +I DFGL+ F E K IGT Y+
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 218
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE G + K DV+S G++L ++SG
Sbjct: 219 APEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 123 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 38 TNNFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLSK--ISEQGLKE-LKNEVILFSKLQ 93
++ + + LG+G FG V + GQE AVK +SK + ++ KE L EV L +L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++KL L+ E T L I ++R +D ++ II G+ Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITY 165
Query: 154 LHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+H++ +I+HRDLK N+LL+ +D N +I DFGL+ F E K IGT Y+
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 219
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE G + K DV+S G++L ++SG
Sbjct: 220 APEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 83
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI------FDQERCKILDWSKR 140
L H N+V LLG C + G ++I EF +L +++ F + D K
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 141 F----HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
F H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
D +MAPE D ++++SDV+SFG+LL EI S
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 20/210 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQGLKELKNEVILFSKL 92
F K LG G FG VYKG + E +A+K L + S + KE+ +E + + +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGTA 148
+ ++ +LLG C+ +L I + M L ++ + + +L+W + A
Sbjct: 69 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 121
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +E E + +
Sbjct: 122 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MA E ++ +SDV+S+G+ + E+++
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 27 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 85
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 86 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 144
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 145 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 195
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 196 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
+ +G+G FG V G G ++AVK + ++ + E + ++L+H NLV+LLG
Sbjct: 199 QTIGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 105 IQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRII 163
++ + L ++ E+M SL ++ + R +L + YL ++ +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FV 311
Query: 164 HRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
HRDL A NVL+ +D K+SDFGL + + G + APE + +FS K
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFSTK 366
Query: 224 SDVFSFGILLLEIIS 238
SDV+SFGILL EI S
Sbjct: 367 SDVWSFGILLWEIYS 381
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 104
+ +G+G FG V G G ++AVK + ++ + E + ++L+H NLV+LLG
Sbjct: 27 QTIGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 105 IQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRII 163
++ + L ++ E+M SL ++ + R +L + YL ++ +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FV 139
Query: 164 HRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
HRDL A NVL+ +D K+SDFGL + + G + APE + +FS K
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFSTK 194
Query: 224 SDVFSFGILLLEIIS 238
SDV+SFGILL EI S
Sbjct: 195 SDVWSFGILLWEIYS 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 25/222 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 90
+ + K LG+G FG V + + +AVK L + + + L +E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 91 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI------FDQERCKILDWSKRF-- 141
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 142 --HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 197 EGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 74
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI------FDQERCKILDWSKR 140
L H N+V LLG C + G ++I EF +L +++ F + D K
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 141 F----HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
F H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 135 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
D +MAPE D ++++SDV+SFG+LL EI S
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 25/222 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 90
+ + K LG+G FG V + + +AVK L + + + L +E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 91 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI------FDQERCKILDWSKRF-- 141
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 142 --HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 197 EGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 64 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 117
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 213 E-YASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227
Query: 272 DPCI 275
P +
Sbjct: 228 WPGV 231
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 26/200 (13%)
Query: 50 GGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSKLQHRNLVKLLGCCI 105
G FG VYK +E +V +K+ SE+ L++ E+ + + H N+VKLL
Sbjct: 21 GDFGKVYKAQ---NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 106 QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICG-TARGVMYLHQDSRLRIIH 164
++ EF ++D+ + + ER + ++C T + YLH + +IIH
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KIIH 131
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR---VIGTYGYMAPEY-----AS 216
RDLKA N+L D + K++DFG++ T +R IGT +MAPE +
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 217 DGQFSVKSDVFSFGILLLEI 236
D + K+DV+S GI L+E+
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 34/293 (11%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKLQHRNLV 98
F+ +K+G+G FG V+KG Q++ ++ + E + + E+ + S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
K G ++ + +I E++ S D LD ++ I+ +G+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
+ IHRD+KA+NVLL + K++DFG+A + + NT +GT +MAPE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQS 179
Query: 219 QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGS 278
+ K+D++S GI +E+ G+ H L LI + P P ++G+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-------PKNNP-----PTLEGN 227
Query: 279 FN--LAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAD 329
++ L E + C+ + P RP+ +L + +L K+ YL +
Sbjct: 228 YSKPLKEFVEA------CLNKEPSFRPTAKE---LLKHKFILRNAKKTSYLTE 271
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 71 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 124
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 125 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 179
Query: 213 E-YASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 234
Query: 272 DPCI 275
P +
Sbjct: 235 WPGV 238
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 147/326 (45%), Gaps = 47/326 (14%)
Query: 8 SNISEKTENDQIQNIDLELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIA 67
S + TEN Q++D E EL F+ +K+G+G FG V+KG Q++
Sbjct: 9 SGVDLGTENLYFQSMDPE----EL---------FTKLEKIGKGSFGEVFKGIDNRTQKVV 55
Query: 68 VKRLSKISEQGLKEL--KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSF 125
++ + E + + E+ + S+ + K G ++ + +I E++ S
Sbjct: 56 AIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS---- 111
Query: 126 IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF 185
D LD ++ I+ +G+ YLH + + IHRD+KA+NVLL + K++DF
Sbjct: 112 ALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADF 168
Query: 186 GLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGF 245
G+A + + NT +GT +MAPE + K+D++S GI +E+ G+
Sbjct: 169 GVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 226
Query: 246 YHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFN--LAEVIRCIHIGLLCVQQHPKDRP 303
H L LI + P P ++G+++ L E + C+ + P RP
Sbjct: 227 LHPMKVLFLI-------PKNNP-----PTLEGNYSKPLKEFVEA------CLNKEPSFRP 268
Query: 304 SMPSVILMLGSETVLPQPKQPGYLAD 329
+ +L + +L K+ YL +
Sbjct: 269 TAKE---LLKHKFILRNAKKTSYLTE 291
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 20/210 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQGLKELKNEVILFSKL 92
F K LG G FG VYKG + E +A+K L + S + KE+ +E + + +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGTA 148
+ ++ +LLG C+ +L I + M L ++ + + +L+W + A
Sbjct: 72 DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 124
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +E E + +
Sbjct: 125 EGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MA E ++ +SDV+S+G+ + E+++
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 83
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI------FDQERCKILDWSKR 140
L H N+V LLG C + G ++I EF +L +++ F + D K
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 141 F----HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
F H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
D +MAPE D ++++SDV+SFG+LL EI S
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ +
Sbjct: 62 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----Q 115
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ + H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWY 170
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 225
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 226 EVVWPGV 232
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELKNEVILFSKL 92
V ++ + + LG+G G V V + +AVK + K + + +K E+ + L
Sbjct: 2 VPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
H N+VK G +G + L E+ + L I D + FH + GV+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH + I HRD+K N+LLD+ N KISDFGLA F + E ++ GT Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 213 EYASDGQFSVKS-DVFSFGILLLEIISGK 240
E +F + DV+S GI+L +++G+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ S SD+++ G ++ ++++G
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 15/200 (7%)
Query: 46 KLGQGGFGPVYKGTLVDGQ---EIAVKRLSKISEQG-LKELKNEVILFSKLQHRNLVKLL 101
+LG G FG V +G + ++A+K L + +E+ +E+ E + +L + +V+L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIF-DQERCKILDWSKRFHIICGTARGVMYLHQDSRL 160
G C Q E +L+ E L F+ +E + + ++ H + + G+ YL + +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMKYLEEKN-- 456
Query: 161 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--YMAPEYASDG 218
+HR+L A NVLL KISDFGL++A G D++ T R G + + APE +
Sbjct: 457 -FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAPECINFR 514
Query: 219 QFSVKSDVFSFGILLLEIIS 238
+FS +SDV+S+G+ + E +S
Sbjct: 515 KFSSRSDVWSYGVTMWEALS 534
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 64 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 117
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227
Query: 272 DPCI 275
P +
Sbjct: 228 WPGV 231
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 116
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226
Query: 272 DPCI 275
P +
Sbjct: 227 WPGV 230
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 64 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 117
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227
Query: 272 DPCI 275
P +
Sbjct: 228 WPGV 231
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ +G+
Sbjct: 71 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 124
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 125 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 179
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 234
Query: 272 DPCI 275
P +
Sbjct: 235 WPGV 238
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 116
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226
Query: 272 DPCI 275
P +
Sbjct: 227 WPGV 230
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 KKLGQGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
++LGQG FG VY+G ++ G+ +AVK +++ S + E NE + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR--------FHIICGTAR 149
V+LLG +G+ L++ E M + L S++ R + + R + A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ YL+ + +HR+L A N ++ D KI DFG+ R + + + +
Sbjct: 142 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIIS 238
MAPE DG F+ SD++SFG++L EI S
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 KKLGQGGFGPVYKGT---LVDGQ---EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNL 97
++LGQG FG VY+G ++ G+ +AVK +++ S + E NE + ++
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR--------FHIICGTAR 149
V+LLG +G+ L++ E M + L S++ R + + R + A
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ YL+ + +HR+L A N ++ D KI DFG+ R + + + +
Sbjct: 143 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIIS 238
MAPE DG F+ SD++SFG++L EI S
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 120
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI------FDQERCKILDWSKR 140
L H N+V LLG C + G ++I EF +L +++ F + D K
Sbjct: 121 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 180
Query: 141 F----HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
F H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 181 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 237
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
D +MAPE D ++++SDV+SFG+LL EI S
Sbjct: 238 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 68 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 121
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 176
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 231
Query: 272 DPCI 275
P +
Sbjct: 232 WPGV 235
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE-LKNEVILFSK 91
N S K LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSL--------DSFIFDQERCKILDWSKRFH 142
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 143 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ A+G+ +L + IHRDL A N+LL KI DFGLAR D
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 196 ---TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+GN + + +MAPE + ++ +SDV+S+GI L E+ S
Sbjct: 223 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE-LKNEVILFSK 91
N S K LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSL--------DSFIFDQERCKILDWSKRFH 142
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 143 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ A+G+ +L + IHRDL A N+LL KI DFGLAR D
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 196 ---TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+GN + + +MAPE + ++ +SDV+S+GI L E+ S
Sbjct: 216 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 25/222 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 90
+ + K LG+G FG V + + +AVK L + + + L +E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 91 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI------FDQERCKILDWSKRF-- 141
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 142 --HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 197 EGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 107/224 (47%), Gaps = 30/224 (13%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ ++ K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 84
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKIL-----DWSKRF 141
L H N+V LLG C + G ++I EF +L +++ + + D K F
Sbjct: 85 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 142 ----HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 145 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ +G+
Sbjct: 64 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLS 117
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227
Query: 272 DPCI 275
P +
Sbjct: 228 WPGV 231
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 25/222 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSK-ISEQGLKELKNEV-ILFS 90
+ + K LG+G FG V + + +AVK L + + + L +E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 91 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI------FDQERCKILDWSKRF-- 141
H N+V LLG C + G ++I EF +L +++ F + D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 142 --HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 197 EGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE-LKNEVILFSK 91
N S K LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSL--------DSFIFDQERCKILDWSKRFH 142
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 143 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ A+G+ +L + IHRDL A N+LL KI DFGLAR D
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 196 ---TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+GN + + +MAPE + ++ +SDV+S+GI L E+ S
Sbjct: 200 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 25/246 (10%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKLQHRNLV 98
F+ +++G+G FG V+KG Q++ ++ + E + + E+ + S+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
K G ++G + +I E++ S D R D + ++ +G+ YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGS----ALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
+ IHRD+KA+NVLL + + K++DFG+A + + NT +GT +MAPE
Sbjct: 141 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQS 195
Query: 219 QFSVKSDVFSFGILLLEIISGKKNRGFYH---------SDNNLNLIGHAWKLWNEGMPSQ 269
+ K+D++S GI +E+ G+ H +N L+G K + E
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKE----- 250
Query: 270 LIDPCI 275
ID C+
Sbjct: 251 FIDACL 256
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE-LKNEVILFSK 91
N S K LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSL--------DSFIFDQERCKILDWSKRFH 142
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 143 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ A+G+ +L + IHRDL A N+LL KI DFGLAR D
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 196 ---TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+GN + + +MAPE + ++ +SDV+S+GI L E+ S
Sbjct: 218 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE-LKNEVILFSK 91
N S K LG G FG V + T +AVK L + +E L +E+ + S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 92 L-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSL--------DSFIFDQERCKILDWSKRFH 142
L H N+V LLG C G L+I E+ L DSFI + I++ +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 143 IICG-------TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
+ A+G+ +L + IHRDL A N+LL KI DFGLAR D
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 196 ---TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+GN + + +MAPE + ++ +SDV+S+GI L E+ S
Sbjct: 223 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 47 LGQGGFGPVYK-GTLVDGQEIAVKRLSKISEQG--LKELKNEVILFSKLQHRNLVKLLGC 103
LG+G FG V K + QE AVK ++K S + + EV L KL H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 104 CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRII 163
++ E T L I ++R D ++ II G+ Y+H+ + I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 164 HRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQF 220
HRDLK N+LL ++D + KI DFGL+ F + K IGT Y+APE G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTY 199
Query: 221 SVKSDVFSFGILLLEIISG 239
K DV+S G++L ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKLQHRNLV 98
F+ +K+G+G FG V+KG Q++ ++ + E + + E+ + S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
K G ++ + +I E++ S D LD ++ I+ +G+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR--VIGTYGYMAPEYAS 216
+ IHRD+KA+NVLL + K++DFG+A G T+ KR +GT +MAPE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIKRNXFVGTPFWMAPEVIK 177
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
+ K+D++S GI +E+ G+ H L LI + P P ++
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-------PKNNP-----PTLE 225
Query: 277 GSFN--LAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAD 329
G+++ L E + C+ + P RP+ +L + +L K+ YL +
Sbjct: 226 GNYSKPLKEFVEA------CLNKEPSFRPTAKE---LLKHKFILRNAKKTSYLTE 271
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L +F+ I L S F ++ +
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLL----Q 117
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ + H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 227
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 228 EVVWPGV 234
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 107/209 (51%), Gaps = 17/209 (8%)
Query: 38 TNNFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLSK--ISEQGLKE-LKNEVILFSKLQ 93
++ + + LG+G FG V + GQE AVK +SK + ++ KE L EV L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N+ KL L+ E T L I ++R +D ++ II G+ Y
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITY 141
Query: 154 LHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
H++ +I+HRDLK N+LL+ +D N +I DFGL+ F E K IGT Y+
Sbjct: 142 XHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYI 195
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE G + K DV+S G++L ++SG
Sbjct: 196 APEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 47 LGQGGFGPVYK-GTLVDGQEIAVKRLSKISEQG--LKELKNEVILFSKLQHRNLVKLLGC 103
LG+G FG V K + QE AVK ++K S + + EV L KL H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 104 CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRII 163
++ E T L I ++R D ++ II G+ Y+H+ + I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 164 HRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQF 220
HRDLK N+LL ++D + KI DFGL+ F + K IGT Y+APE G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTY 199
Query: 221 SVKSDVFSFGILLLEIISG 239
K DV+S G++L ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 47 LGQGGFGPVYK-GTLVDGQEIAVKRLSKISEQG--LKELKNEVILFSKLQHRNLVKLLGC 103
LG+G FG V K + QE AVK ++K S + + EV L KL H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 104 CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRII 163
++ E T L I ++R D ++ II G+ Y+H+ + I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 164 HRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQF 220
HRDLK N+LL ++D + KI DFGL+ F + K IGT Y+APE G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTY 199
Query: 221 SVKSDVFSFGILLLEIISG 239
K DV+S G++L ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKLQHRNLV 98
F+ +K+G+G FG V+KG Q++ ++ + E + + E+ + S+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
K G ++ + +I E++ S D LD ++ I+ +G+ YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR--VIGTYGYMAPEYAS 216
+ IHRD+KA+NVLL + K++DFG+A G T+ KR +GT +MAPE
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIKRNXFVGTPFWMAPEVIK 192
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
+ K+D++S GI +E+ G+ H L LI + P P ++
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-------PKNNP-----PTLE 240
Query: 277 GSFN--LAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAD 329
G+++ L E + C+ + P RP+ +L + +L K+ YL +
Sbjct: 241 GNYSKPLKEFVEA------CLNKEPSFRPTAKE---LLKHKFILRNAKKTSYLTE 286
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K L G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 127 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+ L + S +
Sbjct: 36 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKA 94
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 95 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 153
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 154 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 204
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 205 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+ G +
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 120
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 121 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 41 FSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
+ I +LG G FG VYK + G A K + SE+ L++ E+ + + H +VK
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-RGVMYLHQDS 158
LLG + ++ EF ++D+ + + +R + ++C + +LH
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSK- 128
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA--- 215
RIIHRDLKA NVL+ + + +++DFG++ +T IGT +MAPE
Sbjct: 129 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 216 --SDGQFSVKSDVFSFGILLLEI 236
D + K+D++S GI L+E+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM 207
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 20/210 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQGLKELKNEVILFSKL 92
F K LG G FG VYKG + E +A+K L + S + KE+ +E + + +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKILDWSKRFHIICGTA 148
+ ++ +LLG C+ +L I + M L ++ + + +L+W + A
Sbjct: 79 DNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+ G +E E + +
Sbjct: 132 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MA E ++ +SDV+S+G+ + E+++
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K L G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 127 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+ G +
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+ G +
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 170
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K L G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFGLA+ G +
Sbjct: 120 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 85
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI------FDQERCKILDWSKR 140
L H N+V LLG C + G ++I EF +L +++ F + D K
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKD 145
Query: 141 F----HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
F H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR
Sbjct: 146 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 202
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
D +MAPE D ++++SDV+SFG+LL EI S
Sbjct: 203 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+ G +
Sbjct: 127 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 177
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMT---NKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF++ K +D+ ++ S F ++ G A
Sbjct: 62 HPNIVKLLDV-IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 118
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 119 ---FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 225
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 226 EVVWPGV 232
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 24/249 (9%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSK 91
+ + NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMT---NKSLDSFIFDQERCKILDWSKRFHIICGT 147
L H N+VKLL I E KL L++EF++ K +D+ ++ S F ++ G
Sbjct: 62 LNHPNIVKLLDV-IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-SYLFQLLQGL 119
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
A + H R++HRDLK N+L++ + K++DFGLARAFG + V T
Sbjct: 120 A----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 208 GYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGM 266
Y APE + +S D++S G + E+++ R + D+ ++ + ++ G
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGT 225
Query: 267 PSQLIDPCI 275
P +++ P +
Sbjct: 226 PDEVVWPGV 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 78
E P L I+ T F K LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQE----RCKI 134
KE+ +E + + + + ++ +LLG C+ +L I + M L ++ + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 194
L+W + A+G+ YL +D RL +HRDL A NVL+ + KI+DFG A+ G +
Sbjct: 122 LNWCVQI------AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 195 ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
E E + + +MA E ++ +SDV+S+G+ + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 25/204 (12%)
Query: 40 NFSINKKLGQGGFGPV---YKGTLVDGQEIAVK-----RLSKISEQGLKELKNEVILFSK 91
N+ I K LG+G FG V Y T GQ++A+K L+K QG ++ E+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 64
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
L+H +++KL +E +++ E+ N+ D +I +++ + + F I V
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS---AV 120
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TKRVIGTYGYM 210
Y H R +I+HRDLK N+LLD+ +N KI+DFGL+ T+GN K G+ Y
Sbjct: 121 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYA 173
Query: 211 APEYASDGQFS-VKSDVFSFGILL 233
APE S ++ + DV+S G++L
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVIL 197
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 41 FSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
+ I +LG G FG VYK + G A K + SE+ L++ E+ + + H +VK
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-RGVMYLHQDS 158
LLG + ++ EF ++D+ + + +R + ++C + +LH
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSK- 136
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA--- 215
RIIHRDLKA NVL+ + + +++DFG++ +T IGT +MAPE
Sbjct: 137 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 216 --SDGQFSVKSDVFSFGILLLEI 236
D + K+D++S GI L+E+
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM 215
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 119
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 120 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 25/204 (12%)
Query: 40 NFSINKKLGQGGFGPV---YKGTLVDGQEIAVK-----RLSKISEQGLKELKNEVILFSK 91
N+ I K LG+G FG V Y T GQ++A+K L+K QG ++ E+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 60
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
L+H +++KL +E +++ E+ N+ D +I +++ + + F I V
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS---AV 116
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TKRVIGTYGYM 210
Y H R +I+HRDLK N+LLD+ +N KI+DFGL+ T+GN K G+ Y
Sbjct: 117 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYA 169
Query: 211 APEYASDGQFS-VKSDVFSFGILL 233
APE S ++ + DV+S G++L
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVIL 193
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 25/204 (12%)
Query: 40 NFSINKKLGQGGFGPV---YKGTLVDGQEIAVK-----RLSKISEQGLKELKNEVILFSK 91
N+ I K LG+G FG V Y T GQ++A+K L+K QG ++ E+
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 69
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
L+H +++KL +E +++ E+ N+ D +I +++ + + F I V
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS---AV 125
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TKRVIGTYGYM 210
Y H R +I+HRDLK N+LLD+ +N KI+DFGL+ T+GN K G+ Y
Sbjct: 126 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYA 178
Query: 211 APEYASDGQFS-VKSDVFSFGILL 233
APE S ++ + DV+S G++L
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVIL 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 24/249 (9%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSK 91
+ + NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGT 147
L H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G
Sbjct: 63 LNHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
A + H R++HRDLK N+L++ + K++DFGLARAFG + V T
Sbjct: 121 A----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 171
Query: 208 GYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGM 266
Y APE + +S D++S G + E+++ R + D+ ++ + ++ G
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGT 226
Query: 267 PSQLIDPCI 275
P +++ P +
Sbjct: 227 PDEVVWPGV 235
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 25/204 (12%)
Query: 40 NFSINKKLGQGGFGPV---YKGTLVDGQEIAVK-----RLSKISEQGLKELKNEVILFSK 91
N+ I K LG+G FG V Y T GQ++A+K L+K QG ++ E+
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQG--RIEREISYLRL 70
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
L+H +++KL +E +++ E+ N+ D +I +++ + + F I V
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS---AV 126
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TKRVIGTYGYM 210
Y H R +I+HRDLK N+LLD+ +N KI+DFGL+ T+GN K G+ Y
Sbjct: 127 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYA 179
Query: 211 APEYASDGQFS-VKSDVFSFGILL 233
APE S ++ + DV+S G++L
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVIL 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 28/208 (13%)
Query: 47 LGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC-- 103
+G GGFG V+K +DG+ +KR+ +E+ +E+K +KL H N+V GC
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK----ALAKLDHVNIVHYNGCWD 74
Query: 104 ------------CIQGEEKLLI--YEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ + K L EF +L+ +I ++ R + LD + +
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQITK 133
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
GV Y+H ++I+RDLK SN+ L KI DFGL + D G R GT Y
Sbjct: 134 GVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRSKGTLRY 187
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEII 237
M+PE S + + D+++ G++L E++
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 117
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 118 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 143
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 140
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 143
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 140
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 120 ---FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 226
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 227 EVVWPGV 233
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 118 ---FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 224
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 225 EVVWPGV 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 139
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 120 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 226
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 227 EVVWPGV 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 140
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 118
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 119 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 124
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 125 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 118 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 224
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 225 EVVWPGV 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 116
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226
Query: 272 DPCI 275
P +
Sbjct: 227 WPGV 230
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 119 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 225
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 226 EVVWPGV 232
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 24/249 (9%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSK 91
+ + NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGT 147
L H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G
Sbjct: 62 LNHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
A + H R++HRDLK N+L++ + K++DFGLARAFG + V T
Sbjct: 120 A----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 208 GYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGM 266
Y APE + +S D++S G + E+++ R + D+ ++ + ++ G
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGT 225
Query: 267 PSQLIDPCI 275
P +++ P +
Sbjct: 226 PDEVVWPGV 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 139
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 120 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 226
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 227 EVVWPGV 233
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 121 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 227
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 228 EVVWPGV 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGP-VYKGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 140
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 62 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 119 ---FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 225
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 226 EVVWPGV 232
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 118 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 224
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 225 EVVWPGV 231
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 118 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 224
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 225 EVVWPGV 231
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 146/323 (45%), Gaps = 49/323 (15%)
Query: 30 ELATIVSATNNFSINKKLGQGGFGPVYKGTLV--DGQ--EIAVKRLSK--ISEQGLKELK 83
+L ++ F++ + LG+G FG V + L DG ++AVK L I+ ++E
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEK------LLIYEFMTNKSLDSFIFDQ---ERCKI 134
E + H ++ KL+G ++ K ++I FM + L +F+ E
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 135 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGG 193
L + A G+ YL S IHRDL A N +L +DM ++DFGL+R + G
Sbjct: 134 LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 194 D-ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKN--RGFYHSDN 250
D +G ++ ++A E +D ++V SDV++FG+ + EI++ + G +++
Sbjct: 191 DYYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI 248
Query: 251 NLNLIGHAWKLWNEGMPSQLIDP--CIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
LIG ++L P C++ ++L C PK RPS +
Sbjct: 249 YNYLIGG----------NRLKQPPECMEEVYDLM---------YQCWSADPKQRPSFTCL 289
Query: 309 IL----MLGSETVLPQPKQPGYL 327
+ +LG +VL + P Y+
Sbjct: 290 RMELENILGHLSVLSTSQDPLYI 312
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 47/279 (16%)
Query: 45 KKLGQGGFGPVYKGTLV----DGQEIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLV 98
+K+G+G FG K LV DG++ +K + S++S + +E + EV + + ++H N+V
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQ-----ERCKILDWSKRFHIICGTARGVMY 153
+ + ++ ++ L I Q + +ILDW F IC +
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW---FVQICLALK---- 139
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
H R +I+HRD+K+ N+ L +D ++ DFG+AR + T + IGT Y++PE
Sbjct: 140 -HVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPE 195
Query: 214 YASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDP 273
+ ++ KSD+++ G +L E+ + K HA++ G L+
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCTLK----------------HAFE---AGSMKNLVLK 236
Query: 274 CIQGSFNLAEVIRCIHIGLLCVQ---QHPKDRPSMPSVI 309
I GSF + + L Q ++P+DRPS+ S++
Sbjct: 237 IISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 142
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 34/212 (16%)
Query: 45 KKLGQGGFG--------PVYKGTLVDGQEIAVKRL-SKISEQGLKELKNEVILFSKLQHR 95
+ LG+G FG P GT G+ +AVK L + Q K E+ + L H
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 96 NLVKLLGCC-IQGEEKL-LIYEFMTNKSLDSFIFDQE--RCKILDWSKRFHIICGTARGV 151
+++K GCC QGE+ L L+ E++ SL ++ ++L ++++ IC G+
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---IC---EGM 130
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--- 208
YLH IHR+L A NVLLD D KI DFGLA+A EG+ + G
Sbjct: 131 AYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSP 183
Query: 209 --YMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+ APE + +F SDV+SFG+ L E+++
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 24/247 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTAR 149
H N+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y
Sbjct: 118 ---FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 210 MAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPS 268
APE + +S D++S G + E+++ R + D+ ++ + ++ G P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 224
Query: 269 QLIDPCI 275
+++ P +
Sbjct: 225 EVVWPGV 231
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 116
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226
Query: 272 DPCI 275
P +
Sbjct: 227 WPGV 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F K LG+G F V L +E A+K L K I E + + E + S+L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 95 RNLVKLLGCCIQGEEKLLI-YEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTA 148
VKL Q +EKL + N L +I FD E C RF+
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIV 145
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ YLH IIHRDLK N+LL++DM+ +I+DFG A+ + + +GT
Sbjct: 146 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y++PE ++ SD+++ G ++ ++++G
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+ RL +E E+ L +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 64 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 117
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227
Query: 272 DPCI 275
P +
Sbjct: 228 WPGV 231
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+ RL +E E+ L +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 63 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 116
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226
Query: 272 DPCI 275
P +
Sbjct: 227 WPGV 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 34/212 (16%)
Query: 45 KKLGQGGFG--------PVYKGTLVDGQEIAVKRL-SKISEQGLKELKNEVILFSKLQHR 95
+ LG+G FG P GT G+ +AVK L + Q K E+ + L H
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 96 NLVKLLGCC-IQGEEKL-LIYEFMTNKSLDSFIFDQE--RCKILDWSKRFHIICGTARGV 151
+++K GCC QGE+ L L+ E++ SL ++ ++L ++++ IC G+
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---IC---EGM 130
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--- 208
YLH IHR+L A NVLLD D KI DFGLA+A EG+ + G
Sbjct: 131 AYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSP 183
Query: 209 --YMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+ APE + +F SDV+SFG+ L E+++
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 22/243 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVMY 153
+VKLL I E KL + ++ L +F+ I L S F ++ G A +
Sbjct: 63 IVKLLDV-IHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
H R++HRDLK N+L++ + K++DFGLARAFG T V+ T Y APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPE 172
Query: 214 YASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLID 272
+ +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVVW 227
Query: 273 PCI 275
P +
Sbjct: 228 PGV 230
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 28/220 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DG--QEIAVKRLSKI-SEQGLKELKNEVILFSKL-Q 93
N+ +G+G FG V K + DG + A+KR+ + S+ ++ E+ + KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSL-------------DSFIFDQERCKILDWSKR 140
H N++ LLG C L E+ + +L +F L +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
H ARG+ YL Q + IHRDL A N+L+ ++ KI+DFGL+R E
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRG-----QEVYV 186
Query: 201 KRVIG--TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
K+ +G +MA E + ++ SDV+S+G+LL EI+S
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 24/244 (9%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN 96
NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 97 LVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGTARGVM 152
+VKLL I E KL L++EF+ ++ L F+ I L S F ++ G A
Sbjct: 65 IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+ H R++HRDLK N+L++ + K++DFGLARAFG + V T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 213 EYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
E + +S D++S G + E+++ R + D+ ++ + ++ G P +++
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 228
Query: 272 DPCI 275
P +
Sbjct: 229 WPGV 232
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 28/220 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DG--QEIAVKRLSKI-SEQGLKELKNEVILFSKL-Q 93
N+ +G+G FG V K + DG + A+KR+ + S+ ++ E+ + KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSL-------------DSFIFDQERCKILDWSKR 140
H N++ LLG C L E+ + +L +F L +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
H ARG+ YL Q + IHRDL A N+L+ ++ KI+DFGL+R E
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRG-----QEVYV 196
Query: 201 KRVIG--TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
K+ +G +MA E + ++ SDV+S+G+LL EI+S
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEI----AVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF Y+ T +D +E+ V + + +++ E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K + + + + T +GV YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI-GTYGYMAPEYASDGQFS 221
IHRDLK N+ L+ DM+ KI DFGLA E +G K+ + GT Y+APE S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 222 VKSDVFSFGILLLEIISGK 240
+ D++S G +L ++ GK
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 24/249 (9%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSK 91
+ + NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGT 147
L H N+VKLL I E KL L++EF++ L F+ I L S F ++ G
Sbjct: 61 LNHPNIVKLLDV-IHTENKLYLVFEFLS-MDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
A + H R++HRDLK N+L++ + K++DFGLARAFG + V T
Sbjct: 119 A----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 169
Query: 208 GYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGM 266
Y APE + +S D++S G + E+++ R + D+ ++ + ++ G
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGT 224
Query: 267 PSQLIDPCI 275
P +++ P +
Sbjct: 225 PDEVVWPGV 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 24/249 (9%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSK 91
+ + NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKI---LDWSKRFHIICGT 147
L H N+VKLL I E KL L++EF++ L F+ I L S F ++ G
Sbjct: 62 LNHPNIVKLLDV-IHTENKLYLVFEFLS-MDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
A + H R++HRDLK N+L++ + K++DFGLARAFG + V T
Sbjct: 120 A----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 208 GYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGM 266
Y APE + +S D++S G + E+++ R + D+ ++ + ++ G
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGT 225
Query: 267 PSQLIDPCI 275
P +++ P +
Sbjct: 226 PDEVVWPGV 234
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 139/306 (45%), Gaps = 50/306 (16%)
Query: 30 ELATIVSATNNFSINKKLGQGGFGPVYKGTLV--DGQ--EIAVK--RLSKISEQGLKELK 83
+L +V N + K LG+G FG V +G L DG ++AVK +L S++ ++E
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 84 NEVILFSKLQHRNLVKLLGCCI----QGEEK-LLIYEFMTNKSLDSFIFD---QERCKIL 135
+E H N+++LLG CI QG K ++I FM L +++ + K +
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 136 DWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGD 194
+ A G+ YL S +HRDL A N +L DM ++DFGL++ + GD
Sbjct: 145 PLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
Query: 195 -ETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS-------GKKNRGFY 246
+G ++ ++A E +D ++ KSDV++FG+ + EI + G +N Y
Sbjct: 202 YYRQGRIAKM--PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY 259
Query: 247 HSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMP 306
+ L GH K P +D L E++ C + P DRP+
Sbjct: 260 ----DYLLHGHRLK-----QPEDCLD-------ELYEIMYS------CWRTDPLDRPTFS 297
Query: 307 SVILML 312
+ L L
Sbjct: 298 VLRLQL 303
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ ++ K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK---I 83
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQ--ERCKILDWSKRF--- 141
L H N+V LLG C + G ++I EF +L +++ + E D K F
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 142 -HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 197
H+I + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 144 EHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
Query: 198 GNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEI----AVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF Y+ T +D +E+ V + + +++ E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K + + + + T +GV YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI-GTYGYMAPEYASDGQFS 221
IHRDLK N+ L+ DM+ KI DFGLA E +G K+ + GT Y+APE S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 222 VKSDVFSFGILLLEIISGK 240
+ D++S G +L ++ GK
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
+K+G+G +G VYK G+ A+K RL K E E+ + +L+H N+VKL
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILD---------WSKRFHIICGTARGVMY 153
+ +L++E + DQ+ K+LD +K F + G+ Y
Sbjct: 68 VIHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAY 115
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
H R++HRDLK N+L++++ KI+DFGLARAF G T V+ T Y AP+
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPD 170
Query: 214 Y-ASDGQFSVKSDVFSFGILLLEIISG 239
++S D++S G + E+++G
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
+K+G+G +G VYK G+ A+K RL K E E+ + +L+H N+VKL
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILD---------WSKRFHIICGTARGVMY 153
+ +L++E + DQ+ K+LD +K F + G+ Y
Sbjct: 68 VIHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAY 115
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
H R++HRDLK N+L++++ KI+DFGLARAF G T V+ T Y AP+
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPD 170
Query: 214 Y-ASDGQFSVKSDVFSFGILLLEIISG 239
++S D++S G + E+++G
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEI----AVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF Y+ T +D +E+ V + + +++ E+ + L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K + + + + T +GV YLH + R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 147
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR-VIGTYGYMAPEYASDGQFS 221
IHRDLK N+ L+ DM+ KI DFGLA E +G K+ + GT Y+APE S
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 222 VKSDVFSFGILLLEIISGK 240
+ D++S G +L ++ GK
Sbjct: 205 FEVDIWSLGCILYTLLVGK 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEI----AVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF Y+ T +D +E+ V + + +++ E+ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K + + + + T +GV YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR-VIGTYGYMAPEYASDGQFS 221
IHRDLK N+ L+ DM+ KI DFGLA E +G K+ + GT Y+APE S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 222 VKSDVFSFGILLLEIISGK 240
+ D++S G +L ++ GK
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK---I 85
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQER----CKILDWSKRF- 141
L H N+V LLG C + G ++I EF +L +++ + K D K F
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL 145
Query: 142 ---HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
H+I + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 146 TLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 20/206 (9%)
Query: 45 KKLGQGGFGPVY------KGTLVDGQEIAVKRLSKISE-QGLKELKNEVILFSKLQHRNL 97
+ LG+G FG V +G G+++AVK L S + +LK E+ + L H N+
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 98 VKLLGCCIQ--GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHI-ICGTARGVMYL 154
VK G C + G LI EF+ + SL ++ + L ++ + IC +G+ YL
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC---KGMDYL 142
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTK--RVIGTYGYMAP 212
SR + +HRDL A NVL++ + KI DFGL +A D+ K R + Y AP
Sbjct: 143 --GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-AP 198
Query: 213 EYASDGQFSVKSDVFSFGILLLEIIS 238
E +F + SDV+SFG+ L E+++
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 45 KKLGQGGFGPVY------KGTLVDGQEIAVKRLSKISE-QGLKELKNEVILFSKLQHRNL 97
+ LG+G FG V +G G+++AVK L S + +LK E+ + L H N+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 98 VKLLGCCIQ--GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
VK G C + G LI EF+ + SL ++ + + KI + ++ +G+ YL
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKI-NLKQQLKYAVQICKGMDYL- 130
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTK--RVIGTYGYMAPE 213
SR + +HRDL A NVL++ + KI DFGL +A D+ K R + Y APE
Sbjct: 131 -GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APE 187
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+F + SDV+SFG+ L E+++
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
+K+G+G +G VYK G+ A+K RL K E E+ + +L+H N+VKL
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILD---------WSKRFHIICGTARGVMY 153
+ +L++E + DQ+ K+LD +K F + G+ Y
Sbjct: 68 VIHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAY 115
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
H R++HRDLK N+L++++ KI+DFGLARAF G T ++ T Y AP+
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAPD 170
Query: 214 Y-ASDGQFSVKSDVFSFGILLLEIISG 239
++S D++S G + E+++G
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI-GTYGYMAPEYASDGQFS 221
IHRDLK N+ L++D+ KI DFGLA E +G K+V+ GT Y+APE S S
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 222 VKSDVFSFGILLLEIISGK 240
+ DV+S G ++ ++ GK
Sbjct: 218 FEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSKIS----EQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF ++ + D +E+ ++ S +++ E+ + L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI-GTYGYMAPEYASDGQFS 221
IHRDLK N+ L++D+ KI DFGLA E +G K+V+ GT Y+APE S S
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 222 VKSDVFSFGILLLEIISGK 240
+ DV+S G ++ ++ GK
Sbjct: 220 FEVDVWSIGCIMYTLLVGK 238
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 39/234 (16%)
Query: 45 KKLGQGGFG--------PVYKGTLVDGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHR 95
+ LG+G FG P GT G+ +AVK L + L+ + E+ + L H
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 96 NLVKLLGCC-IQGEEKL-LIYEFMTNKSLDSFIFDQERC----KILDWSKRFHIICGTAR 149
++VK GCC QGE+ + L+ E++ SL ++ C ++L ++++ IC
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQ---IC---E 122
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG- 208
G+ YLH IHR L A NVLLD D KI DFGLA+A EG+ + G
Sbjct: 123 GMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGD 175
Query: 209 ----YMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHA 258
+ APE + +F SDV+SFG+ L E+++ + H+ LIGH
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFT-ELIGHT 228
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 39/234 (16%)
Query: 45 KKLGQGGFG--------PVYKGTLVDGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHR 95
+ LG+G FG P GT G+ +AVK L + L+ + E+ + L H
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 96 NLVKLLGCC-IQGEEKL-LIYEFMTNKSLDSFIFDQERC----KILDWSKRFHIICGTAR 149
++VK GCC QGE+ + L+ E++ SL ++ C ++L ++++ IC
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQ---IC---E 123
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG- 208
G+ YLH IHR L A NVLLD D KI DFGLA+A EG+ + G
Sbjct: 124 GMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGD 176
Query: 209 ----YMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHA 258
+ APE + +F SDV+SFG+ L E+++ + H+ LIGH
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFT-ELIGHT 229
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 15/244 (6%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL--KNEVILFSKLQHRNLV 98
F+ ++G+G FG VYKG +E+ ++ + E + + E+ + S+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+ G ++ + +I E++ S D + L+ + I+ +G+ YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGS----ALDLLKPGPLEETYIATILREILKGLDYLHSE- 135
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR--VIGTYGYMAPEYAS 216
R IHRD+KA+NVLL + + K++DFG+A G T+ KR +GT +MAPE
Sbjct: 136 --RKIHRDIKAANVLLSEQGDVKLADFGVA----GQLTDTQIKRNXFVGTPFWMAPEVIK 189
Query: 217 DGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQ 276
+ K+D++S GI +E+ G+ H L LI EG S+ ++
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVE 249
Query: 277 GSFN 280
N
Sbjct: 250 ACLN 253
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 41 FSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLV 98
+ + ++LG GGFG V + D G+++A+K+ + +S + + E+ + KL H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 99 KL------LGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
L + LL E+ L ++ E C L ++ + +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 153 YLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
YLH++ RIIHRDLK N++L Q + KI D G A+ D+ E T+ +GT Y
Sbjct: 137 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTE-FVGTLQY 190
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE +++V D +SFG L E I+G
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 41 FSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLV 98
+ + ++LG GGFG V + D G+++A+K+ + +S + + E+ + KL H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 99 KL------LGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
L + LL E+ L ++ E C L ++ + +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 153 YLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
YLH++ RIIHRDLK N++L Q + KI D G A+ D+ E T+ +GT Y
Sbjct: 136 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTE-FVGTLQY 189
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE +++V D +SFG L E I+G
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 28/220 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DG--QEIAVKRLSKI-SEQGLKELKNEVILFSKL-Q 93
N+ +G+G FG V K + DG + A+KR+ + S+ ++ E+ + KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSL-------------DSFIFDQERCKILDWSKR 140
H N++ LLG C L E+ + +L +F L +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 141 FHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 200
H ARG+ YL Q + IHR+L A N+L+ ++ KI+DFGL+R E
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRG-----QEVYV 193
Query: 201 KRVIG--TYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
K+ +G +MA E + ++ SDV+S+G+LL EI+S
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 136
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI-GTYGYMAPEYASDGQFS 221
IHRDLK N+ L++D+ KI DFGLA E +G K+V+ GT Y+APE S S
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 222 VKSDVFSFGILLLEIISGK 240
+ DV+S G ++ ++ GK
Sbjct: 194 FEVDVWSIGCIMYTLLVGK 212
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 41/221 (18%)
Query: 47 LGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC-- 103
+G GGFG V+K +DG+ ++R+ +E+ +E+K +KL H N+V GC
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK----ALAKLDHVNIVHYNGCWD 75
Query: 104 -------------------------CIQGEEKLLI--YEFMTNKSLDSFIFDQERCKILD 136
+ + K L EF +L+ +I ++ R + LD
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLD 134
Query: 137 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 196
+ +GV Y+H ++IHRDLK SN+ L KI DFGL + D
Sbjct: 135 KVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND-- 189
Query: 197 EGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEII 237
G R GT YM+PE S + + D+++ G++L E++
Sbjct: 190 -GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 37 ATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQ 93
+ NF +K+G+G +G VYK + G+ +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHI--------I 144
H N+VKLL I E KL L++E + DQ+ K +D S I +
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEHV----------DQDLKKFMDASALTGIPLPLIKSYL 112
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
+G+ + H R++HRDLK N+L++ + K++DFGLARAFG + V
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 205 GTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWN 263
T Y APE + +S D++S G + E+++ R + D+ ++ + ++
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--T 222
Query: 264 EGMPSQLIDPCI 275
G P +++ P +
Sbjct: 223 LGTPDEVVWPGV 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 103/212 (48%), Gaps = 34/212 (16%)
Query: 45 KKLGQGGFG--------PVYKGTLVDGQEIAVKRL-SKISEQGLKELKNEVILFSKLQHR 95
+ LG+G FG P GT G+ +AVK L + Q K E+ + L H
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 96 NLVKLLGCCIQ-GEEKL-LIYEFMTNKSLDSFIFDQE--RCKILDWSKRFHIICGTARGV 151
+++K GCC G L L+ E++ SL ++ ++L ++++ IC G+
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---IC---EGM 147
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--- 208
YLH IHRDL A NVLLD D KI DFGLA+A EG+ + G
Sbjct: 148 AYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEXYRVREDGDSP 200
Query: 209 --YMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+ APE + +F SDV+SFG+ L E+++
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRN 96
+F + LG+GGFG V++ VD A+KR+ + + +E + EV +KL+H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 97 LVKLLGCCIQ---------GEEKLLIY---EFMTNKSLDSFIFDQERCKILDWSKR--FH 142
+V+ ++ K+ +Y + ++L ++ RC I + + H
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTIEERERSVCLH 122
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE----- 197
I A V +LH ++HRDLK SN+ D K+ DFGL A DE E
Sbjct: 123 IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 198 -----GNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEII 237
+GT YM+PE +S K D+FS G++L E++
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKE------LKNEVILFSKLQH 94
+ I + LG+G FG V T Q+ L IS Q LK+ ++ E+ L+H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVA--LKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRF--HIICGTARGVM 152
+++KL + +++ E+ + D +I +++R D +RF IIC +
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAGGELFD-YIVEKKRMT-EDEGRRFFQQIICA----IE 122
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TKRVIGTYGYMA 211
Y H R +I+HRDLK N+LLD ++N KI+DFGL+ T+GN K G+ Y A
Sbjct: 123 YCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAA 175
Query: 212 PEYASDGQFS-VKSDVFSFGILLLEIISGK 240
PE + ++ + DV+S GI+L ++ G+
Sbjct: 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI-GTYGYMAPEYASDGQFS 221
IHRDLK N+ L++D+ KI DFGLA E +G K+ + GT Y+APE S S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 222 VKSDVFSFGILLLEIISGK 240
+ DV+S G ++ ++ GK
Sbjct: 196 FEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI-GTYGYMAPEYASDGQFS 221
IHRDLK N+ L++D+ KI DFGLA E +G K+ + GT Y+APE S S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 222 VKSDVFSFGILLLEIISGK 240
+ DV+S G ++ ++ GK
Sbjct: 200 FEVDVWSIGCIMYTLLVGK 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSK----ISEQGLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGF ++ + D +E+ ++ + +++ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ ++ E +SL +R K L + + + G YLH++ R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI-GTYGYMAPEYASDGQFS 221
IHRDLK N+ L++D+ KI DFGLA E +G K+ + GT Y+APE S S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 222 VKSDVFSFGILLLEIISGK 240
+ DV+S G ++ ++ GK
Sbjct: 196 FEVDVWSIGCIMYTLLVGK 214
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 38/227 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+N + + +G+G +G VYKG+L D + +AVK S + Q KN + ++H N+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIA 70
Query: 99 KLLGCCIQGEEK---------LLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ I G+E+ LL+ E+ N SL ++ DW + R
Sbjct: 71 RF----IVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTR 122
Query: 150 GVMYLHQD------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD------ETE 197
G+ YLH + + I HRDL + NVL+ D ISDFGL+ G+ E +
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 198 GNTKRVIGTYGYMAPEYAS------DGQFSVKS-DVFSFGILLLEII 237
+GT YMAPE D + ++K D+++ G++ EI
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 44/239 (18%)
Query: 18 QIQNIDLELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKIS- 75
Q +N++L + L N+FS+++ +G+GGFG VY D G+ A+K L K
Sbjct: 176 QWKNVELNIHL--------TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI 227
Query: 76 --EQGLKELKNEVILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQ 129
+QG NE I+ S LV C C+ Y F T L SFI D
Sbjct: 228 KMKQGETLALNERIMLS------LVSTGDCPFIVCMS-------YAFHTPDKL-SFILDL 273
Query: 130 ERCKILDWSKRFHIICGTARGVMYL--------HQDSRLRIIHRDLKASNVLLDQDMNPK 181
L + H + A Y H +R +++RDLK +N+LLD+ + +
Sbjct: 274 MNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVR 332
Query: 182 ISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISG 239
ISD GLA F + + +GT+GYMAPE G + +D FS G +L +++ G
Sbjct: 333 ISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 44/239 (18%)
Query: 18 QIQNIDLELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKIS- 75
Q +N++L + L N+FS+++ +G+GGFG VY D G+ A+K L K
Sbjct: 175 QWKNVELNIHL--------TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI 226
Query: 76 --EQGLKELKNEVILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQ 129
+QG NE I+ S LV C C+ Y F T L SFI D
Sbjct: 227 KMKQGETLALNERIMLS------LVSTGDCPFIVCMS-------YAFHTPDKL-SFILDL 272
Query: 130 ERCKILDWSKRFHIICGTARGVMYL--------HQDSRLRIIHRDLKASNVLLDQDMNPK 181
L + H + A Y H +R +++RDLK +N+LLD+ + +
Sbjct: 273 MNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVR 331
Query: 182 ISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISG 239
ISD GLA F + + +GT+GYMAPE G + +D FS G +L +++ G
Sbjct: 332 ISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 44/239 (18%)
Query: 18 QIQNIDLELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKIS- 75
Q +N++L + L N+FS+++ +G+GGFG VY D G+ A+K L K
Sbjct: 176 QWKNVELNIHL--------TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI 227
Query: 76 --EQGLKELKNEVILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQ 129
+QG NE I+ S LV C C+ Y F T L SFI D
Sbjct: 228 KMKQGETLALNERIMLS------LVSTGDCPFIVCMS-------YAFHTPDKL-SFILDL 273
Query: 130 ERCKILDWSKRFHIICGTARGVMYL--------HQDSRLRIIHRDLKASNVLLDQDMNPK 181
L + H + A Y H +R +++RDLK +N+LLD+ + +
Sbjct: 274 MNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVR 332
Query: 182 ISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISG 239
ISD GLA F + + +GT+GYMAPE G + +D FS G +L +++ G
Sbjct: 333 ISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 44/239 (18%)
Query: 18 QIQNIDLELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKIS- 75
Q +N++L + L N+FS+++ +G+GGFG VY D G+ A+K L K
Sbjct: 176 QWKNVELNIHL--------TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI 227
Query: 76 --EQGLKELKNEVILFSKLQHRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQ 129
+QG NE I+ S LV C C+ Y F T L SFI D
Sbjct: 228 KMKQGETLALNERIMLS------LVSTGDCPFIVCMS-------YAFHTPDKL-SFILDL 273
Query: 130 ERCKILDWSKRFHIICGTARGVMYL--------HQDSRLRIIHRDLKASNVLLDQDMNPK 181
L + H + A Y H +R +++RDLK +N+LLD+ + +
Sbjct: 274 MNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVR 332
Query: 182 ISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISG 239
ISD GLA F + + +GT+GYMAPE G + +D FS G +L +++ G
Sbjct: 333 ISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + K+LG G FG V G ++A+K + + S E E + L H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L G C + +I E+M N L +++ +E + + + YL
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 119
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
+ +HRDL A N L++ K+SDFGL+R DE + + PE
Sbjct: 120 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYS 176
Query: 219 QFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
+FS KSD+++FG+L+ EI S GK + + I +L+ + S+ +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 230
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + K+LG G FG V G ++A+K + + S E E + L H LV
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 66
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L G C + +I E+M N L +++ +E + + + YL
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 123
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
+ +HRDL A N L++ K+SDFGL+R DE + + PE
Sbjct: 124 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYS 180
Query: 219 QFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
+FS KSD+++FG+L+ EI S GK + + I +L+ + S+ +
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 234
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + K+LG G FG V G ++A+K + + S E E + L H LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 82
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L G C + +I E+M N L +++ +E + + + YL
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 139
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
+ +HRDL A N L++ K+SDFGL+R DE + + PE
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYS 196
Query: 219 QFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
+FS KSD+++FG+L+ EI S GK + + I +L+ + S+ +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 250
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + K+LG G FG V G ++A+K + + S E E + L H LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 82
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L G C + +I E+M N L +++ +E + + + YL
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 139
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
+ +HRDL A N L++ K+SDFGL+R DE + + PE
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV-RWSPPEVLMYS 196
Query: 219 QFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
+FS KSD+++FG+L+ EI S GK + + I +L+ + S+ +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 250
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + K+LG G FG V G ++A+K + + S E E + L H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L G C + +I E+M N L +++ +E + + + YL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 124
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
+ +HRDL A N L++ K+SDFGL+R DE + + PE
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYS 181
Query: 219 QFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
+FS KSD+++FG+L+ EI S GK + + I +L+ + S+ +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 235
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + K+LG G FG V G ++A+K + + S E E + L H LV
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 73
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L G C + +I E+M N L +++ +E + + + YL
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 130
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
+ +HRDL A N L++ K+SDFGL+R DE + + PE
Sbjct: 131 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYS 187
Query: 219 QFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
+FS KSD+++FG+L+ EI S GK + + I +L+ + S+ +
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 241
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 40 NFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQHR 95
+F I + LG G FG V+ + +G+ A+K L K LK+++ +E ++ S + H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
++++ G ++ +I +++ L S + +R + +F+ + YLH
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP--NPVAKFYA-AEVCLALEYLH 123
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
II+RDLK N+LLD++ + KI+DFG A+ T + GT Y+APE
Sbjct: 124 SKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAPEVV 175
Query: 216 SDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDN 250
S ++ D +SFGIL+ E+++G FY S+
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYT--PFYDSNT 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+ + K+LG G FG V G ++A+K + + S E E + L H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L G C + +I E+M N L +++ +E + + + YL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 124
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
+ +HRDL A N L++ K+SDFGL+R DE + + PE
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYS 181
Query: 219 QFSVKSDVFSFGILLLEIIS-GKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLI 271
+FS KSD+++FG+L+ EI S GK + + I +L+ + S+ +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 235
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ Q+ + D ++ + G+ YL + +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ----THGKWPVKWYAPE 184
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ Q+ + D ++ + G+ YL + +
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 145
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 198
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ Q+ + D ++ + G+ YL + +
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 127
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 128 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 180
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ Q+ + D ++ + G+ YL + +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 147
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 200
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ Q+ + D ++ + G+ YL + +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 147
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 200
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ Q+ + D ++ + G+ YL + +
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 137
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 138 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 190
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ Q+ + D ++ + G+ YL + +
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 125
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 126 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 178
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ Q+ + D ++ + G+ YL + +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 131
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 184
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQH----------- 94
LGQG FG V K +D + A+K++ + +E+ L + +EV+L + L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 95 --RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
RN VK + + + E+ N++L I + + D + + + +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD--EYWRLFRQILEALS 130
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD------------ETEGNT 200
Y+H IIHRDLK N+ +D+ N KI DFGLA+ + N
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 201 KRVIGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEII 237
IGT Y+A E G ++ K D++S GI+ E+I
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 489
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 542
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 44 NKKLGQGGFGPVYKGTLVDGQEIAVKRL----SKISEQGLK-ELKNEVILFSKLQHRNLV 98
+K+LG G FG V KG + + + ++ ++ LK EL E + +L + +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+++G C + E +L+ E L+ ++ K + + H + + G+ YL + +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 490
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG-----YMAPE 213
+HRDL A NVLL KISDFGL++A DE + T+G + APE
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 543
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
+ +FS KSDV+SFG+L+ E S
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 45 KKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISE-----QGLKELKNEVILFSKLQHRNLV 98
K LG G FG V+KG + +G+ I + K+ E Q + + + ++ L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI-----LDWSKRFHIICGTARGVMY 153
+LLG C G L+ +++ SL + Q R + L+W + A+G+ Y
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQI------AKGMYY 130
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
L + ++HR+L A NVLL +++DFG+A D+ + +MA E
Sbjct: 131 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
G+++ +SDV+S+G+ + E+++
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 21/238 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSK----ISEQGLKELKNEVILFSKLQH 94
+F ++K LG+G FG V+ Q A+K L K + + + + +L +H
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 78
Query: 95 RNLVKLLGCCIQGEEKLL-IYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
L + C Q +E L + E++ L ++ + C D S+ G+ +
Sbjct: 79 PFLTHMF-CTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTKRVIGTYGYMAP 212
LH I++RDLK N+LLD+D + KI+DFG+ + GD T GT Y+AP
Sbjct: 135 LHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---AKTNEFCGTPDYIAP 188
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQL 270
E +++ D +SFG+LL E++ G+ +H + L H+ ++ N P L
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSP---FHGQDEEELF-HSIRMDNPFYPRWL 242
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 45 KKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISE-----QGLKELKNEVILFSKLQHRNLV 98
K LG G FG V+KG + +G+ I + K+ E Q + + + ++ L H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKI-----LDWSKRFHIICGTARGVMY 153
+LLG C G L+ +++ SL + Q R + L+W + A+G+ Y
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQI------AKGMYY 148
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
L + ++HR+L A NVLL +++DFG+A D+ + +MA E
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 214 YASDGQFSVKSDVFSFGILLLEIIS 238
G+++ +SDV+S+G+ + E+++
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA-RAFGGDETEGNTKRVIGTYGYMA 211
Y H R+IHRD+K N+LL KI+DFG + A TE + GT Y+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTE-----LCGTLDYLP 174
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISGK 240
PE K D++S G+L E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 36 SATNNFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLS--KISEQGLKELKNEVILFSKL 92
S ++ + +G G +G K DG+ + K L ++E + L +EV L +L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 93 QHRNLVKLLGCCIQGEEKLL--IYEFMTNKSLDSFIFD--QERCKILDWSKRFHIICGTA 148
+H N+V+ I L + E+ L S I +ER + LD ++
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLT 121
Query: 149 RGVMYLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGT 206
+ H+ D ++HRDLK +NV LD N K+ DFGLAR D E K +GT
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--EDFAKEFVGT 179
Query: 207 YGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
YM+PE + ++ KSD++S G LL E+ +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 26/213 (12%)
Query: 39 NNFSINKKLGQGGFGPVY---KGTLVD-GQEIAVKRLSKISEQGLKELKN--EVILFSKL 92
++F + K LGQG FG V+ K T D G A+K L K + + ++ E + + +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 93 QHRNLVKLLGCCIQGEEKL-LIYEFMTNKSL-----DSFIFDQERCKILDWSKRFHIICG 146
H +VKL Q E KL LI +F+ L +F +E K +
Sbjct: 88 NHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF--------YLAE 138
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGT 206
A G+ +LH L II+RDLK N+LLD++ + K++DFGL++ + E GT
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--AIDHEKKAYSFCGT 193
Query: 207 YGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
YMAPE + S +D +S+G+L+ E+++G
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 22/226 (9%)
Query: 26 LPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 85
LPL TI + K++G+G +G V+ G G+++AVK E + E
Sbjct: 27 LPLLVQRTIA---KQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFR-ETE 81
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
+ ++H N++ + I+G +T+ + ++D + LD +
Sbjct: 82 IYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAY 141
Query: 146 GTARGVMYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE--- 197
+ G+ +LH + + I HRDLK+ N+L+ ++ I+D GLA F D E
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI 201
Query: 198 -GNTKRVIGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEI 236
NT+ +GT YM PE + Q + +D++SFG++L E+
Sbjct: 202 PPNTR--VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQHR 95
++ + LG G FG V G + G ++AVK L++ + L ++K E+ +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
+++KL + ++ E+++ L +I R + ++ + F I V Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS---AVDYCH 128
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
R ++HRDLK NVLLD MN KI+DFGL+ E + G+ Y APE
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVI 182
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
S ++ + D++S G++L ++ G
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 40 NFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQHR 95
++ + LG G FG V G + G ++AVK L++ + L ++K E+ +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
+++KL + ++ E+++ L +I R + ++ + F I V Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS---AVDYCH 128
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
R ++HRDLK NVLLD MN KI+DFGL+ E ++ G+ Y APE
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVI 182
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
S ++ + D++S G++L ++ G
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 21/238 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSK----ISEQGLKELKNEVILFSKLQH 94
+F ++K LG+G FG V+ Q A+K L K + + + + +L +H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 95 RNLVKLLGCCIQGEEKLL-IYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
L + C Q +E L + E++ L ++ + C D S+ G+ +
Sbjct: 78 PFLTHMF-CTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTKRVIGTYGYMAP 212
LH I++RDLK N+LLD+D + KI+DFG+ + GD T GT Y+AP
Sbjct: 134 LHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---AKTNXFCGTPDYIAP 187
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQL 270
E +++ D +SFG+LL E++ G+ +H + L H+ ++ N P L
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSP---FHGQDEEELF-HSIRMDNPFYPRWL 241
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 46 KLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 100
+LG+G FG V L D G +AVK+L ++ + E+ + L +VK
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 101 LGCCI-QGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
G G +L L+ E++ + L F+ Q LD S+ +G+ YL S
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 129
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--YMAPEYAS 216
R R +HRDL A N+L++ + + KI+DFGLA+ D+ + R G + APE S
Sbjct: 130 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXVVREPGQSPIFWYAPESLS 187
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
D FS +SDV+SFG++L E+ +
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 36 SATNNFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLS--KISEQGLKELKNEVILFSKL 92
S ++ + +G G +G K DG+ + K L ++E + L +EV L +L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 93 QHRNLVKLLGCCIQGEEKLL--IYEFMTNKSLDSFIFD--QERCKILDWSKRFHIICGTA 148
+H N+V+ I L + E+ L S I +ER + LD ++
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLT 121
Query: 149 RGVMYLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGT 206
+ H+ D ++HRDLK +NV LD N K+ DFGLAR D + T +GT
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGT 179
Query: 207 YGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
YM+PE + ++ KSD++S G LL E+ +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 201
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+NF + LG+G FG V + + G AVK L K + + ++ E + S ++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 95 RNLVKLLGCCIQGEEKLL-IYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
+ L CC Q ++L + EF+ L +F ++ + D ++ +M+
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
LH II+RDLK NVLLD + + K++DFG+ + G T GT Y+APE
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKE--GICNGVTTATFCGTPDYIAPE 194
Query: 214 YASDGQFSVKSDVFSFGILLLEIISG 239
+ + D ++ G+LL E++ G
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 46 KLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 100
+LG+G FG V L D G +AVK+L ++ + E+ + L +VK
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 101 LGCCI-QGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
G G + L L+ E++ + L F+ Q LD S+ +G+ YL S
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 132
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--YMAPEYAS 216
R R +HRDL A N+L++ + + KI+DFGLA+ D+ + R G + APE S
Sbjct: 133 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQSPIFWYAPESLS 190
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
D FS +SDV+SFG++L E+ +
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 175
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA-RAFGGDETEGNTKRVIGTYGYMA 211
Y H R+IHRD+K N+LL KI+DFG + A T+ + GT Y+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-----LCGTLDYLP 174
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISGK 240
PE K D++S G+L E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 175
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPP 175
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 46 KLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 100
+LG+G FG V L D G +AVK+L ++ + E+ + L +VK
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 101 LGCCI-QGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
G G + L L+ E++ + L F+ Q LD S+ +G+ YL S
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 133
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--YMAPEYAS 216
R R +HRDL A N+L++ + + KI+DFGLA+ D+ + R G + APE S
Sbjct: 134 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQSPIFWYAPESLS 191
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
D FS +SDV+SFG++L E+ +
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 177
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 33/218 (15%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQH----------- 94
LGQG FG V K +D + A+K++ + +E+ L + +EV+L + L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 95 --RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
RN VK + + + E+ N +L I + + D + + + +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD--EYWRLFRQILEALS 130
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD------------ETEGNT 200
Y+H IIHRDLK N+ +D+ N KI DFGLA+ + N
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 201 KRVIGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEII 237
IGT Y+A E G ++ K D++S GI+ E+I
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 179
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 174
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA-RAFGGDETEGNTKRVIGTYGYMA 211
Y H R+IHRD+K N+LL KI+DFG + A T+ + GT Y+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-----LCGTLDYLP 175
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISGK 240
PE K D++S G+L E + GK
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 46 KLGQGGFGPV---YKGTLVD--GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 100
+LG+G FG V L D G +AVK+L ++ + E+ + L +VK
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 101 LGCCI-QGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
G G + L L+ E++ + L F+ Q LD S+ +G+ YL S
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 145
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG--YMAPEYAS 216
R R +HRDL A N+L++ + + KI+DFGLA+ D+ + R G + APE S
Sbjct: 146 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQSPIFWYAPESLS 203
Query: 217 DGQFSVKSDVFSFGILLLEIIS 238
D FS +SDV+SFG++L E+ +
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA-RAFGGDETEGNTKRVIGTYGYMA 211
Y H R+IHRD+K N+LL KI+DFG + A T+ + GT Y+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-----LCGTLDYLP 179
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISGK 240
PE K D++S G+L E + GK
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 178
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 175
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + +T + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDT--LCGTLDYLPP 176
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 178
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
I + +G+G FG VY G I + + + +E LK K EV+ + + +H N+V
Sbjct: 34 QLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 159
+G C+ +I ++L S + D + +LD +K I +G+ YLH
Sbjct: 94 FMGACMSPPHLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAKG- 150
Query: 160 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFG---GDETEGNTKRVIGTYGYMAPE--- 213
I+H+DLK+ NV D + I+DFGL G E + G ++APE
Sbjct: 151 --ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207
Query: 214 -YASDGQ-----FSVKSDVFSFGILLLEI 236
+ D + FS SDVF+ G + E+
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA-RAFGGDETEGNTKRVIGTYGYMA 211
Y H R+IHRD+K N+LL KI+DFG + A T+ + GT Y+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-----LCGTLDYLP 174
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISGK 240
PE K D++S G+L E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 26/290 (8%)
Query: 47 LGQGGFGPVYKGTLVD-GQEIAVKR-LSKISEQGLKELK-NEVILFSKLQHRNLVKLLGC 103
+G+G +G V K D G+ +A+K+ L ++ +K++ E+ L +L+H NLV LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 104 CIQGEEKLLIYEFMTNKSLDSF-IFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRI 162
C + + L++EF+ + LD +F LD+ + G+ + H + I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHSHN---I 145
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE-YASDGQFS 221
IHRD+K N+L+ Q K+ DFG AR + + + T Y APE D ++
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--VATRWYRAPELLVGDVKYG 203
Query: 222 VKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCIQGSFNL 281
DV++ G L+ E+ G+ + D++++ + H +P Q FN
Sbjct: 204 KAVDVWAIGCLVTEMFMGEP---LFPGDSDIDQLYHIMMCLGNLIPRH------QELFNK 254
Query: 282 AEVIRCIHIGLLCVQQHPKDR--PSMPSVILMLGSETVLPQPKQPGYLAD 329
V + + + ++ P +R P + V++ L + + P + + A+
Sbjct: 255 NPVFAGVRLPEI-KEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAE 303
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 192
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 40 NFSINKKLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQHR 95
++ + LG G FG V G + G ++AVK L++ + L +++ E+ +H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
+++KL + ++ E+++ L +I R LD + + GV Y H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCH 133
Query: 156 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
R ++HRDLK NVLLD MN KI+DFGL+ E + G+ Y APE
Sbjct: 134 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRXSCGSPNYAAPEVI 187
Query: 216 SDGQFS-VKSDVFSFGILLLEIISG 239
S ++ + D++S G++L ++ G
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPP 176
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPP 178
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPP 201
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 36 SATNNFSINKK-------LGQGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-LK 83
S+T ++ I ++ +G+G FG V++G + + +A+K + ++E
Sbjct: 28 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 87
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHI 143
E + + H ++VKL+G I +I E T L SF+ Q R LD +
Sbjct: 88 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILY 144
Query: 144 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV 203
+ + YL R +HRD+ A NVL+ + K+ DFGL+R + D T +
Sbjct: 145 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKG 200
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEII 237
+MAPE + +F+ SDV+ FG+ + EI+
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKI-----SEQGLKELKNEVILFSKLQHR 95
F +KLG G FG V+ LV+ + ++R+ K S+ +++++ E+ + L H
Sbjct: 24 FIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTN-KSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
N++K+ ++ E + L+ + Q R K L ++ + Y
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNP----KISDFGLARAFGGDETEGNTKRVIGTYGYM 210
H ++H+DLK N+L QD +P KI DFGLA F DE N GT YM
Sbjct: 141 HSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAA---GTALYM 193
Query: 211 APE-YASDGQFSVKSDVFSFGILLLEIISG 239
APE + D F K D++S G+++ +++G
Sbjct: 194 APEVFKRDVTF--KCDIWSAGVVMYFLLTG 221
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 36 SATNNFSINKK-------LGQGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-LK 83
S+T ++ I ++ +G+G FG V++G + + +A+K + ++E
Sbjct: 5 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 64
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHI 143
E + + H ++VKL+G I +I E T L SF+ Q R LD +
Sbjct: 65 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILY 121
Query: 144 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV 203
+ + YL R +HRD+ A NVL+ + K+ DFGL+R + D T +
Sbjct: 122 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKG 177
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEII 237
+MAPE + +F+ SDV+ FG+ + EI+
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 36 SATNNFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLS--KISEQGLKELKNEVILFSKL 92
S ++ + +G G +G K DG+ + K L ++E + L +EV L +L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 93 QHRNLVKLLGCCIQGEEKLL--IYEFMTNKSLDSFIFD--QERCKILDWSKRFHIICGTA 148
+H N+V+ I L + E+ L S I +ER + LD ++
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLT 121
Query: 149 RGVMYLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGT 206
+ H+ D ++HRDLK +NV LD N K+ DFGLAR D + K +GT
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKAFVGT 179
Query: 207 YGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
YM+PE + ++ KSD++S G LL E+ +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 38 TNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 94
++N+ + ++LG+G F V + G E A K ++ K+S + ++L+ E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
N+V+L + L+++ +T L I +E D S H I + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 120
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
H + I+HR+LK N+LL K++DFGLA E GT GY++
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLS 174
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE +S D+++ G++L ++ G
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 172
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 23/202 (11%)
Query: 47 LGQGGFGPVYKGTLVDGQEI-AVKRLS---------KISEQGLKELKNEVILFSKLQHRN 96
LG+G F VYK + +I A+K++ I+ L+E+K L +L H N
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK----LLQELSHPN 73
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
++ LL L+++FM L+ I D K + ++ T +G+ YLHQ
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQ 130
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
I+HRDLK +N+LLD++ K++DFGLA++FG + V T Y APE
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLF 185
Query: 217 DGQ-FSVKSDVFSFGILLLEII 237
+ + V D+++ G +L E++
Sbjct: 186 GARMYGVGVDMWAVGCILAELL 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 38 TNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 94
++N+ + ++LG+G F V + G E A K ++ K+S + ++L+ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
N+V+L + L+++ +T L I +E D S H I + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 121
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
H + I+HR+LK N+LL K++DFGLA E GT GY++
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLS 175
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE +S D+++ G++L ++ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 38 TNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 94
++N+ + ++LG+G F V + G E A K ++ K+S + ++L+ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
N+V+L + L+++ +T L I +E D S H I + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 121
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
H + I+HR+LK N+LL K++DFGLA E GT GY++
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLS 175
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE +S D+++ G++L ++ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 47 LGQGGFGPVYKGTLVDGQ-EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 105
LG+G +G VY G + Q IA+K + + + + L E+ L L+H+N+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 106 QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR----GVMYLHQDSRLR 161
+ + E + SL + + R K I + G+ YLH + +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 162 IIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQ- 219
I+HRD+K NVL++ KISDFG ++ G T+ GT YMAPE G
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPR 186
Query: 220 -FSVKSDVFSFGILLLEIISGK 240
+ +D++S G ++E+ +GK
Sbjct: 187 GYGKAADIWSLGCTIIEMATGK 208
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 47 LGQGGFGPVYKGTLVDGQ-EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 105
LG+G +G VY G + Q IA+K + + + + L E+ L L+H+N+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 106 QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR----GVMYLHQDSRLR 161
+ + E + SL + + R K I + G+ YLH + +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 142
Query: 162 IIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQ- 219
I+HRD+K NVL++ KISDFG ++ G T+ GT YMAPE G
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPR 200
Query: 220 -FSVKSDVFSFGILLLEIISGK 240
+ +D++S G ++E+ +GK
Sbjct: 201 GYGKAADIWSLGCTIIEMATGK 222
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSK 91
A + +N+ LG+G FG VY+G + + +AVK K KE +E ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-FDQERCKILDWSKRFHIICGTARG 150
L H ++VKL+G I+ E +I E L ++ ++ K+L IC +
Sbjct: 82 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC---KA 137
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YL + +HRD+ N+L+ K+ DFGL+R + DE +M
Sbjct: 138 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWM 193
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
+PE + +F+ SDV+ F + + EI+S K F+ + ++
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 235
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V V G +IAVK+LS+ + + K E+ L
Sbjct: 45 TIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 90 SKLQHRNLVKLL-----GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 105 KHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 160
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 161 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 212
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + +++ D++S G ++ E+++G+
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 38 TNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQH 94
++N+ + ++LG+G F V + G E A K ++ K+S + ++L+ E + KLQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
N+V+L + L+++ +T L I +E D S H I + Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 144
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
H + I+HR+LK N+LL K++DFGLA E GT GY++
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLS 198
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE +S D+++ G++L ++ G
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSK 91
A + +N+ LG+G FG VY+G + + +AVK K KE +E ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-FDQERCKILDWSKRFHIICGTARG 150
L H ++VKL+G I+ E +I E L ++ ++ K+L IC +
Sbjct: 66 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC---KA 121
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YL + +HRD+ N+L+ K+ DFGL+R + DE +M
Sbjct: 122 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWM 177
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
+PE + +F+ SDV+ F + + EI+S K F+ + ++
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 219
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H ++IHRD+K N+LL KI+DFG + + GT Y+ P
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 175
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 43 INKKLGQGGFGPVYKGTLVD----GQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 97
+ + +G+G FG V++G + +A+K + ++E E + + H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
VKL+G I +I E T L SF+ Q R LD + + + YL
Sbjct: 74 VKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
R +HRD+ A NVL+ + K+ DFGL+R + D T + +MAPE +
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINF 186
Query: 218 GQFSVKSDVFSFGILLLEII 237
+F+ SDV+ FG+ + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQ----EIAVKRLSKISEQGLKE-LKNEVILFSK 91
A + +N+ LG+G FG VY+G + + +AVK K KE +E ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-FDQERCKILDWSKRFHIICGTARG 150
L H ++VKL+G I+ E +I E L ++ ++ K+L IC +
Sbjct: 70 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC---KA 125
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YL + +HRD+ N+L+ K+ DFGL+R + DE +M
Sbjct: 126 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWM 181
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
+PE + +F+ SDV+ F + + EI+S K F+ + ++
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 223
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 36 SATNNFSINKK-------LGQGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-LK 83
++T ++ I ++ +G+G FG V++G + + +A+K + ++E
Sbjct: 2 ASTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 61
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHI 143
E + + H ++VKL+G I +I E T L SF+ Q R LD +
Sbjct: 62 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILY 118
Query: 144 ICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV 203
+ + YL R +HRD+ A NVL+ + K+ DFGL+R + D T +
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKG 174
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEII 237
+MAPE + +F+ SDV+ FG+ + EI+
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 97
+ + +G+G FG V++G + + +A+K + ++E E + + H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
VKL+G I +I E T L SF+ Q R LD + + + YL
Sbjct: 74 VKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
R +HRD+ A NVL+ + K+ DFGL+R + D T + +MAPE +
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 218 GQFSVKSDVFSFGILLLEII 237
+F+ SDV+ FG+ + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDG----QEIAVKRLSKISEQGLKELKN--EVILFSKL 92
+ F + K LGQG FG V+ + G Q A+K L K + + ++ E + ++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 93 QHRNLVKLLGCCIQGEEKL-LIYEFMTNKSL-----DSFIFDQERCKILDWSKRFHIICG 146
H +VKL Q E KL LI +F+ L +F +E K +
Sbjct: 84 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF--------YLAE 134
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGT 206
A + +LH L II+RDLK N+LLD++ + K++DFGL++ + E GT
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGT 189
Query: 207 YGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
YMAPE + + +D +SFG+L+ E+++G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 43 INKKLGQGGFGPVYKGTLVD----GQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 97
+ + +G+G FG V++G + +A+K + ++E E + + H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
VKL+G I +I E T L SF+ Q R LD + + + YL
Sbjct: 74 VKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
R +HRD+ A NVL+ + K+ DFGL+R + D T + +MAPE +
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 218 GQFSVKSDVFSFGILLLEII 237
+F+ SDV+ FG+ + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDG----QEIAVKRLSKISEQGLKELKN--EVILFSKL 92
+ F + K LGQG FG V+ + G Q A+K L K + + ++ E + ++
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 93 QHRNLVKLLGCCIQGEEKL-LIYEFMTNKSL-----DSFIFDQERCKILDWSKRFHIICG 146
H +VKL Q E KL LI +F+ L +F +E K +
Sbjct: 85 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF--------YLAE 135
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGT 206
A + +LH L II+RDLK N+LLD++ + K++DFGL++ + E GT
Sbjct: 136 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGT 190
Query: 207 YGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
YMAPE + + +D +SFG+L+ E+++G
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTN----KSLDSFI-FDQERCKILDWSKRFHIICGT 147
+H N+++L G LI E+ K L FD++R I
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT--------YITEL 122
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
A + Y H R+IHRD+K N+LL KI+DFG + + GT
Sbjct: 123 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTL 175
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y+ PE K D++S G+L E + GK
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTN----KSLDSFI-FDQERCKILDWSKRFHIICGT 147
+H N+++L G LI E+ K L FD++R I
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT--------YITEL 122
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
A + Y H R+IHRD+K N+LL KI+DFG + + GT
Sbjct: 123 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTL 175
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y+ PE K D++S G+L E + GK
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI++FG + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDG----QEIAVKRLSKISEQGLKELKN--EVILFSKL 92
+ F + K LGQG FG V+ + G Q A+K L K + + ++ E + ++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 93 QHRNLVKLLGCCIQGEEKL-LIYEFMTNKSL-----DSFIFDQERCKILDWSKRFHIICG 146
H +VKL Q E KL LI +F+ L +F +E K +
Sbjct: 84 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY--------LAE 134
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGT 206
A + +LH L II+RDLK N+LLD++ + K++DFGL++ + E GT
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGT 189
Query: 207 YGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
YMAPE + + +D +SFG+L+ E+++G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 97
+ + +G+G FG V++G + + +A+K + ++E E + + H ++
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
VKL+G I +I E T L SF+ Q R LD + + + YL
Sbjct: 71 VKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK 127
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
R +HRD+ A NVL+ + K+ DFGL+R + D T + +MAPE +
Sbjct: 128 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 183
Query: 218 GQFSVKSDVFSFGILLLEII 237
+F+ SDV+ FG+ + EI+
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 45 KKLGQGGFGPVY----KGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 100
KKLG G +G V K T V+ + I + R + +S +L EV + L H N++KL
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVE-RAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 101 LGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRL 160
L+ E L I + + +D + II GV YLH+ +
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHKHN-- 156
Query: 161 RIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
I+HRDLK N+LL ++D KI DFGL+ F E + K +GT Y+APE
Sbjct: 157 -IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPEVLR- 211
Query: 218 GQFSVKSDVFSFGILLLEIISG 239
++ K DV+S G++L +++G
Sbjct: 212 KKYDEKCDVWSIGVILFILLAG 233
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 97
+ + +G+G FG V++G + + +A+K + ++E E + + H ++
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 76
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
VKL+G I +I E T L SF+ Q R LD + + + YL
Sbjct: 77 VKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK 133
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
R +HRD+ A NVL+ + K+ DFGL+R + D T + +MAPE +
Sbjct: 134 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 189
Query: 218 GQFSVKSDVFSFGILLLEII 237
+F+ SDV+ FG+ + EI+
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKL 92
A +F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+++L G LI E+ L + + ++ D + I A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y H R+IHRD+K N+LL KI++FG + + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPP 177
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E K D++S G+L E + GK
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 16/210 (7%)
Query: 37 ATNNFSINKK---LGQGGFGPVYK-GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
A N+F K LG G FG V+K G ++A K + + +E+KNE+ + ++L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSL-DSFIFDQERCKILDWSKRFHIICGTARGV 151
H NL++L + +L+ E++ L D I + LD IC G+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC---EGI 200
Query: 152 MYLHQDSRLRIIHRDLKASNVL-LDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYGY 209
++HQ + I+H DLK N+L +++D KI DFGLAR + E K GT +
Sbjct: 201 RHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEF 254
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + S +D++S G++ ++SG
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKLQH 94
+F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
N+++L G LI E+ L + + ++ D + I A + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
H R+IHRD+K N+LL + KI+DFG + + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
K D++S G+L E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 38/228 (16%)
Query: 41 FSINKKLGQGGFGPVYKGTLVD---GQEIAVKRLSKISEQGLKELKN--EVILFSKLQ-H 94
+ + KKLG+G +G V+K +D G+ +AVK++ + + E+++ ++L H
Sbjct: 11 YELVKKLGKGAYGIVWKS--IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 95 RNLVKLLGCCIQGEEK--LLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
N+V LL ++ L++++M L + I R IL+ + +++ + +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVI----RANILEPVHKQYVVYQLIKVIK 123
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG------------------- 193
YLH ++HRD+K SN+LL+ + + K++DFGL+R+F
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 194 DETEGNTKRVIGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEIISGK 240
D+ + + T Y APE +++ D++S G +L EI+ GK
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 38 TNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQ 93
++ + + + LG GG V+ L D +++AVK L + + E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 94 HRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
H +V + G ++ E++ +L + + + + +I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQ 127
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYG 208
+ + HQ+ IIHRD+K +N+L+ K+ DFG+ARA + T VIGT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y++PE A +SDV+S G +L E+++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELKNEVILFSKLQH 94
+F I + LG+G FG VY + I A+K L +++ + G++ +L+ EV + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
N+++L G LI E+ L + + ++ D + I A + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYA---PLGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
H R+IHRD+K N+LL + KI+DFG + + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
K D++S G+L E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 36 SATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS--KISEQGLKELKNEVILFSKL 92
S T+ + + + +G+G F V + L G E A K ++ K+S + ++L+ E + L
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+V+L + L+++ +T L I +E D S H I V+
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAVL 117
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ HQ + ++HRDLK N+LL K++DFGLA GD+ GT GY
Sbjct: 118 HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGY 172
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++PE + D+++ G++L ++ G
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQ---GLKELKNEVILFSKLQH 94
N F + LG+GGFG V + G+ A K+L K + G NE + K+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH---IICGTARGV 151
R +V L + L+ M L I+ + + F+ I CG
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG----- 298
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYM 210
L R RI++RDLK N+LLD + +ISD GLA EG T K +GT GYM
Sbjct: 299 --LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV----PEGQTIKGRVGTVGYM 352
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGK 240
APE + +++ D ++ G LL E+I+G+
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 39 NNFSINKKLGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQ---GLKELKNEVILFSKLQH 94
N F + LG+GGFG V + G+ A K+L K + G NE + K+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH---IICGTARGV 151
R +V L + L+ M L I+ + + F+ I CG
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG----- 298
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYM 210
L R RI++RDLK N+LLD + +ISD GLA EG T K +GT GYM
Sbjct: 299 --LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV----PEGQTIKGRVGTVGYM 352
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGK 240
APE + +++ D ++ G LL E+I+G+
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 14/228 (6%)
Query: 39 NNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+++ I+++LG G FG V++ T G A K + E + ++ E+ S L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRF-HIICGTARGVMYLHQ 156
V L E ++IYEFM+ L + D+ D + + +C +G+ ++H+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC---KGLCHMHE 273
Query: 157 DSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
++ +H DLK N++ + K+ DFGL + + + K GT + APE
Sbjct: 274 NN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEV 327
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL-NLIGHAWKL 261
A +D++S G+L ++SG G + D L N+ W +
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 375
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHRNLVK 99
+ +G G +G V Y L Q++AVK+LS+ + + + E+ L L+H N++
Sbjct: 26 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 100 LL-----GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LL I+ ++ + + L++ + +C+ L ++ RG+ Y+
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYI 139
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
H IIHRDLK SNV +++D +I DFGLAR +E G + T Y APE
Sbjct: 140 HSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQ-ADEEMTG----YVATRWYRAPEI 191
Query: 215 ASDG-QFSVKSDVFSFGILLLEIISGK 240
+ ++ D++S G ++ E++ GK
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ +C+ L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 259
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 38 TNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQ 93
++ + + + LG GG V+ L D +++AVK L + + E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 94 HRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
H +V + G ++ E++ +L + + + + +I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQ 127
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYG 208
+ + HQ+ IIHRD+K +N+++ K+ DFG+ARA + T VIGT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y++PE A +SDV+S G +L E+++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 33/218 (15%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQH----------- 94
LGQG FG V K +D + A+K++ + +E+ L + +EV L + L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 95 --RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
RN VK + + E+ N++L I + + D + + + +
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD--EYWRLFRQILEALS 130
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD------------ETEGNT 200
Y+H IIHR+LK N+ +D+ N KI DFGLA+ + N
Sbjct: 131 YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 201 KRVIGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEII 237
IGT Y+A E G ++ K D +S GI+ E I
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 43 INKKLGQGGFGPVYKGTLVD----GQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNL 97
+ + +G+G FG V++G + +A+K + ++E E + + H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
VKL+G I +I E T L SF+ Q R LD + + + YL
Sbjct: 74 VKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASD 217
R +HRD+ A NVL+ K+ DFGL+R + D T + +MAPE +
Sbjct: 131 ---RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 218 GQFSVKSDVFSFGILLLEII 237
+F+ SDV+ FG+ + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 38 TNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQ 93
++ + + + LG GG V+ L D +++AVK L + + E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 94 HRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
H +V + G ++ E++ +L + + + + +I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQ 127
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYG 208
+ + HQ+ IIHRD+K +N+++ K+ DFG+ARA + T VIGT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y++PE A +SDV+S G +L E+++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEI----AVKRLSKIS----EQGLKELKNEVILFS 90
NF + K LG G +G V+ + G + A+K L K + + + + E +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 91 KLQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
++ + L Q E KL LI +++ L + + +ER I G
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT----EHEVQIYVGEI- 168
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
V+ L +L II+RD+K N+LLD + + ++DFGL++ F DETE GT Y
Sbjct: 169 -VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEY 226
Query: 210 MAPEY--ASDGQFSVKSDVFSFGILLLEIISG 239
MAP+ D D +S G+L+ E+++G
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 14/228 (6%)
Query: 39 NNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+++ I+++LG G FG V++ T G A K + E + ++ E+ S L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRF-HIICGTARGVMYLHQ 156
V L E ++IYEFM+ L + D+ D + + +C +G+ ++H+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC---KGLCHMHE 167
Query: 157 DSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
++ +H DLK N++ + K+ DFGL + + + K GT + APE
Sbjct: 168 NN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEV 221
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL-NLIGHAWKL 261
A +D++S G+L ++SG G + D L N+ W +
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 269
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHRNLVK 99
+ +G G +G V Y L Q++AVK+LS+ + + + E+ L L+H N++
Sbjct: 34 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 100 LL-----GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LL I+ ++ + + L++ + +C+ L ++ RG+ Y+
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYI 147
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
H IIHRDLK SNV +++D +I DFGLAR +E G + T Y APE
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQ-ADEEMTG----YVATRWYRAPEI 199
Query: 215 ASDG-QFSVKSDVFSFGILLLEIISGK 240
+ ++ D++S G ++ E++ GK
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 33 TIVSATNNFSINK-----KLGQGGFGPVYKGT-LVDGQEIAVKRLS-KISEQGLKELK-N 84
++ +A + SI++ KLG+G +G VYK V + +A+KR+ + E+G+
Sbjct: 23 SVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR 82
Query: 85 EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
EV L +LQHRN+++L LI+E+ N L ++ D+ + K F +
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM-DKNPDVSMRVIKSF--L 138
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLL---DQDMNP--KISDFGLARAFGGDETEGN 199
GV + H SR R +HRDLK N+LL D P KI DFGLARAF G
Sbjct: 139 YQLINGVNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQF 194
Query: 200 TKRVIGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEII 237
T +I T Y PE +S D++S + E++
Sbjct: 195 THEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 35 VSATNNFSINKK-------LGQGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-L 82
+ +T ++ I ++ +G+G FG V++G + + +A+K + ++E
Sbjct: 379 MPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H ++VKL+G I +I E T L SF+ Q R LD +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLIL 495
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ + YL R +HRD+ A NVL+ + K+ DFGL+R + D T +
Sbjct: 496 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASK 551
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEII 237
+MAPE + +F+ SDV+ FG+ + EI+
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 25/209 (11%)
Query: 46 KLGQGGFGPVYKGT-LVDGQEIAVKRL-SKISEQGLKELKNEV-ILFSKLQHRNLVKLLG 102
++G+G +G V K GQ +AVKR+ S + E+ K+L ++ ++ +V+ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 103 CCIQGEEKLLIYEFMTNKSLDSF------IFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+ + + E M+ S D F + D ++ I T + + +L +
Sbjct: 89 ALFREGDCWICMELMST-SFDKFYKYVYSVLDD----VIPEEILGKITLATVKALNHLKE 143
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTK-RVIGTYGYMAPEY- 214
+ L+IIHRD+K SN+LLD+ N K+ DFG++ G + K R G YMAPE
Sbjct: 144 N--LKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRDAGCRPYMAPERI 197
Query: 215 ---ASDGQFSVKSDVFSFGILLLEIISGK 240
AS + V+SDV+S GI L E+ +G+
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 40/254 (15%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQ--GLKELKNEVILFS 90
+ + +++F + LG+G +G V T G+ +A+K++ + L+ L+ E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 91 KLQHRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICG 146
+H N++ + + ++ I + + L I Q +L + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----MLSDDHIQYFIYQ 120
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF---GGDETEGNTKR- 202
T R V LH + +IHRDLK SN+L++ + + K+ DFGLAR D +E ++
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 203 ----VIGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLE------IISGKKNR-------- 243
+ T Y APE + ++S DV+S G +L E I G+ R
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237
Query: 244 --GFYHSDNNLNLI 255
G HSDN+L I
Sbjct: 238 IIGTPHSDNDLRCI 251
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 40/254 (15%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQ--GLKELKNEVILFS 90
+ + +++F + LG+G +G V T G+ +A+K++ + L+ L+ E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 91 KLQHRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICG 146
+H N++ + + ++ I + + L I Q +L + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----MLSDDHIQYFIYQ 120
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF---GGDETEGNTKR- 202
T R V LH + +IHRDLK SN+L++ + + K+ DFGLAR D +E ++
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 203 ----VIGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLE------IISGKKNR-------- 243
+ T Y APE + ++S DV+S G +L E I G+ R
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237
Query: 244 --GFYHSDNNLNLI 255
G HSDN+L I
Sbjct: 238 IIGTPHSDNDLRCI 251
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 40/254 (15%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQ--GLKELKNEVILFS 90
+ + +++F + LG+G +G V T G+ +A+K++ + L+ L+ E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 91 KLQHRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICG 146
+H N++ + + ++ I + + L I Q +L + I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----MLSDDHIQYFIYQ 120
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF---GGDETEGNTKR- 202
T R V LH + +IHRDLK SN+L++ + + K+ DFGLAR D +E ++
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 203 ----VIGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLE------IISGKKNR-------- 243
+ T Y APE + ++S DV+S G +L E I G+ R
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237
Query: 244 --GFYHSDNNLNLI 255
G HSDN+L I
Sbjct: 238 IIGTPHSDNDLRCI 251
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 41 FSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS--KISEQGLKELKNEVILFSKLQHRNL 97
+ + ++LG+G F V + ++ GQE A K ++ K+S + ++L+ E + L+H N+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 98 VKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD 157
V+L + LI++ +T L I +E D S H I V++ HQ
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAVLHCHQ- 139
Query: 158 SRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTKR---VIGTYGYMA 211
+ ++HRDLK N+LL + K++DFGLA E EG + GT GY++
Sbjct: 140 --MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQAWFGFAGTPGYLS 192
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE + D+++ G++L ++ G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 33/210 (15%)
Query: 45 KKLGQGGFGPVYKG-TLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 101
K +G G G V V G +AVK+LS+ ++ K E++L + H+N++ LL
Sbjct: 30 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 149
F K+L+ F + D C++ LD + +++
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC 137
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ +LH IIHRDLK SN+++ D KI DFGLAR + T V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRY-Y 191
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
APE ++ D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 35 VSATNNFSINKK-------LGQGGFGPVYKGTLVDGQE----IAVKRLSKISEQGLKE-L 82
+ +T ++ I ++ +G+G FG V++G + + +A+K + ++E
Sbjct: 379 MPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
E + + H ++VKL+G I +I E T L SF+ Q R LD +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLIL 495
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
+ + YL R +HRD+ A NVL+ K+ DFGL+R + D T +
Sbjct: 496 YAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASK 551
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEII 237
+MAPE + +F+ SDV+ FG+ + EI+
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 120/291 (41%), Gaps = 35/291 (12%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQ--EIAVKRLSK---ISEQ 77
E PL L ++ + + +KLG G FG V +G G+ +AVK L +
Sbjct: 5 EGPLQSLTCLI-GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE 63
Query: 78 GLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDW 137
+ + EV L HRNL++L G + K+ + E SL + + +L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 138 SKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDE 195
R+ + A G+ YL R IHRDL A N+LL KI DFGL RA D
Sbjct: 123 LSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLI 255
R + + + APE FS SD + FG+ L E+ + Y + + L
Sbjct: 178 XVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLN 229
Query: 256 GHA--WKLWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
G K+ EG + C Q +N + + C P+DRP+
Sbjct: 230 GSQILHKIDKEGERLPRPEDCPQDIYN---------VMVQCWAHKPEDRPT 271
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D C++ LD + +++
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G + T V+ Y
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPEVVTRY 190
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y APE + D++S G ++ E+I G
Sbjct: 191 -YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 47 LGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQ---GLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGFG V+ + G+ A K+L+K + G + E + +K+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFD-QERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
+ L+ M + I++ E + G+ +LHQ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFS 221
II+RDLK NVLLD D N +ISD GLA +T+ TK GT G+MAPE ++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYD 367
Query: 222 VKSDVFSFGILLLEIISGK 240
D F+ G+ L E+I+ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 47 LGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQ---GLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGFG V+ + G+ A K+L+K + G + E + +K+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFD-QERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
+ L+ M + I++ E + G+ +LHQ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFS 221
II+RDLK NVLLD D N +ISD GLA +T+ TK GT G+MAPE ++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYD 367
Query: 222 VKSDVFSFGILLLEIISGK 240
D F+ G+ L E+I+ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 47 LGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQ---GLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGFG V+ + G+ A K+L+K + G + E + +K+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFD-QERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
+ L+ M + I++ E + G+ +LHQ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFS 221
II+RDLK NVLLD D N +ISD GLA +T+ TK GT G+MAPE ++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYD 367
Query: 222 VKSDVFSFGILLLEIISGK 240
D F+ G+ L E+I+ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 47 LGQGGFGPVYKGTL-VDGQEIAVKRLSKISEQ---GLKELKNEVILFSKLQHRNLVKLLG 102
LG+GGFG V+ + G+ A K+L+K + G + E + +K+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFD-QERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
+ L+ M + I++ E + G+ +LHQ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFS 221
II+RDLK NVLLD D N +ISD GLA +T+ TK GT G+MAPE ++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYD 367
Query: 222 VKSDVFSFGILLLEIISGK 240
D F+ G+ L E+I+ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 120/291 (41%), Gaps = 35/291 (12%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQ--EIAVKRLSK---ISEQ 77
E PL L ++ + + +KLG G FG V +G G+ +AVK L +
Sbjct: 5 EGPLQSLTCLI-GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE 63
Query: 78 GLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDW 137
+ + EV L HRNL++L G + K+ + E SL + + +L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 138 SKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDE 195
R+ + A G+ YL R IHRDL A N+LL KI DFGL RA D
Sbjct: 123 LSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 196 TEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLI 255
R + + + APE FS SD + FG+ L E+ + Y + + L
Sbjct: 178 YVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLN 229
Query: 256 GHA--WKLWNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
G K+ EG + C Q +N + + C P+DRP+
Sbjct: 230 GSQILHKIDKEGERLPRPEDCPQDIYN---------VMVQCWAHKPEDRPT 271
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 30 ELA-TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNE 85
ELA TI + +G G +G V G +AVK+LS+ + + K E
Sbjct: 8 ELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 86 VILFSKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERC-KILDWSK 139
+ L ++H N++ LL + + + L++ + +C K+ D
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCAKLTDDHV 123
Query: 140 RFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 199
+F +I RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G
Sbjct: 124 QF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 177
Query: 200 TKRVIGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
+ T Y APE + ++ D++S G ++ E+++G+
Sbjct: 178 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 31 LATIVSATNNFSINKKLGQGGFGPVYKGTL-VDGQEIAVKRLS--KISEQGLKELKNEVI 87
+AT T+++ + ++LG+G F V + QE A K ++ K+S + ++L+ E
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 88 LFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGT 147
+ L+H N+V+L + L+++ +T L I +E D S H I
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIHQI 139
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTKRVI 204
V ++HQ I+HRDLK N+LL K++DFGLA G++
Sbjct: 140 LESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG--FA 194
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
GT GY++PE + D+++ G++L ++ G
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG----FV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG----FV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 45 KKLGQGGFGPVYKGTLVDGQ-EIAVKRLSKIS-------------EQGLKELKNEVILFS 90
+KLG G +G V +G E A+K + K E+ +E+ NE+ L
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 91 KLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L H N++KL + L+ EF L I ++ + D +I+ G
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSG 158
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARAFGGDETEGNTKRVIGTY 207
+ YLH+ + I+HRD+K N+LL+ +N KI DFGL+ F D + +GT
Sbjct: 159 ICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK---LRDRLGTA 212
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y+APE +++ K DV+S G+++ ++ G
Sbjct: 213 YYIAPEVLK-KKYNEKCDVWSCGVIMYILLCG 243
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 28/174 (16%)
Query: 79 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEF--------MTNKSLDSFIFDQE 130
++++ E+ + KL H N+VKL+ E L F M +L DQ
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 131 RCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 190
R D K G+ YLH +IIHRD+K SN+L+ +D + KI+DFG++
Sbjct: 140 RFYFQDLIK----------GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 191 F-GGDETEGNTKRVIGTYGYMAPEYASDGQ--FSVKS-DVFSFGILLLEIISGK 240
F G D NT +GT +MAPE S+ + FS K+ DV++ G+ L + G+
Sbjct: 187 FKGSDALLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 137
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 189
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 31 LATIVSA--TNNFSINKKLGQGGFGPVYKGT-LVDGQEIA--VKRLSKISEQGLKELKNE 85
+ATI T + + ++LG+G F V + ++ GQE A + K+S + ++L+ E
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE 60
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
+ L+H N+V+L + LI++ +T L I +E D S H I
Sbjct: 61 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQ 117
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTKR 202
V++ HQ + ++HR+LK N+LL + K++DFGLA E EG +
Sbjct: 118 QILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQA 169
Query: 203 ---VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
GT GY++PE + D+++ G++L ++ G
Sbjct: 170 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 26 TIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 141
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 142 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 193
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 127
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 179
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 116/283 (40%), Gaps = 34/283 (12%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQ--EIAVKRLSK---ISEQGLKELKNE 85
T + + + +KLG G FG V +G G+ +AVK L + + + E
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
V L HRNL++L G + K+ + E SL + + +L R+ +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTKRV 203
A G+ YL R IHRDL A N+LL KI DFGL RA D R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHA--WKL 261
+ + + APE FS SD + FG+ L E+ + Y + + L G K+
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKI 227
Query: 262 WNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
EG + C Q +N + + C P+DRP+
Sbjct: 228 DKEGERLPRPEDCPQDIYN---------VMVQCWAHKPEDRPT 261
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 151
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 203
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 150
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 151 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 202
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 47 LGQGGFGPVYKGTLVDGQE-IAVKRLSKISEQGLK-ELKNEVILFSKLQHRNLVKLLGCC 104
LG G F V Q+ +A+K ++K + +G + ++NE+ + K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
G LI + ++ L I ++ D S+ +I V YLH L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 165 RDLKASNVL---LDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEYASDGQF 220
RDLK N+L LD+D ISDFGL++ E G+ GT GY+APE + +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 221 SVKSDVFSFGILLLEIISG 239
S D +S G++ ++ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 151
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXG----XV 203
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 127
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG----FV 179
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D C++ LD + +++
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y APE + D++S G ++ E+I G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 255
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQE-IAVKRLSKISEQGLK-ELKNEVILFSKLQHRNLV 98
+ LG G F V Q+ +A+K ++K + +G + ++NE+ + K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
L G LI + ++ L I ++ D S+ +I V YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD-- 134
Query: 159 RLRIIHRDLKASNVL---LDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEY 214
L I+HRDLK N+L LD+D ISDFGL++ E G+ GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEV 189
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
+ +S D +S G++ ++ G
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 26/247 (10%)
Query: 8 SNISEKTENDQIQ-NIDLELPLF---EL-ATIVSATNNFSINKKLGQGGFGPVYKG-TLV 61
S + TEN Q N E P F EL TI + +G G +G V
Sbjct: 9 SGVDLGTENLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK 68
Query: 62 DGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHRNLVKLLGC-----CIQGEEKLLIY 114
G +AVK+LS+ + + K E+ L ++H N++ LL ++ + +
Sbjct: 69 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 115 EFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL 174
+ L++ + +C+ L +I RG+ Y+H IIHRDLK SN+ +
Sbjct: 129 THLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAV 181
Query: 175 DQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG-QFSVKSDVFSFGILL 233
++D KI DFGLAR DE G + T Y APE + ++ D++S G ++
Sbjct: 182 NEDCELKILDFGLAR-HTDDEMXG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 236
Query: 234 LEIISGK 240
E+++G+
Sbjct: 237 AELLTGR 243
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 228 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 275
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 255
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 31 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D C++ LD + +++
Sbjct: 89 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 190
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y APE + D++S G ++ E+I G
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 38 TNNFSINKKLGQGGFGPVY--KGTLVDGQEIAVKRLSKISEQGLKE---LKNEVILFSKL 92
++ + KKLG G +G V K L G E A+K + K S L +EV + +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSL-DSFIFDQERCKILDWSKRFHIICGTARGV 151
H N++KL L+ E L D I Q+ ++ ++ GT
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT--- 135
Query: 152 MYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
YLH+ + I+HRDLK N+LL+ +D KI DFGL+ F E G K +GT
Sbjct: 136 -YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAY 188
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y+APE ++ K DV+S G++L ++ G
Sbjct: 189 YIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
S D++S G +L E++S NR + + L+ + H + G PSQ
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 249
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 210 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 257
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 155
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 215
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 216 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 263
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 255
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D C++ LD + +++
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 116/283 (40%), Gaps = 34/283 (12%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQ--EIAVKRLSK---ISEQGLKELKNE 85
T + + + +KLG G FG V +G G+ +AVK L + + + E
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
V L HRNL++L G + K+ + E SL + + +L R+ +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTKRV 203
A G+ YL R IHRDL A N+LL KI DFGL RA D R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHA--WKL 261
+ + + APE FS SD + FG+ L E+ + Y + + L G K+
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKI 227
Query: 262 WNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
EG + C Q +N + + C P+DRP+
Sbjct: 228 DKEGERLPRPEDCPQDIYN---------VMVQCWAHKPEDRPT 261
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 138
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG----YV 190
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 116/283 (40%), Gaps = 34/283 (12%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQ--EIAVKRLSK---ISEQGLKELKNE 85
T + + + +KLG G FG V +G G+ +AVK L + + + E
Sbjct: 6 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
V L HRNL++L G + K+ + E SL + + +L R+ +
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 122
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTKRV 203
A G+ YL R IHRDL A N+LL KI DFGL RA D R
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHA--WKL 261
+ + + APE FS SD + FG+ L E+ + Y + + L G K+
Sbjct: 180 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKI 231
Query: 262 WNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
EG + C Q +N + + C P+DRP+
Sbjct: 232 DKEGERLPRPEDCPQDIYN---------VMVQCWAHKPEDRPT 265
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 45 KKLGQGGFGPVYKG-TLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 101
K +G G G V V G +AVK+LS+ ++ K E++L + H+N++ LL
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGTAR 149
F K+L+ F + D C++ LD + +++
Sbjct: 88 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC 135
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
G+ +LH IIHRDLK SN+++ D KI DFGLAR + T V+ Y Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM--MTPYVVTRY-Y 189
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
APE + D++S G ++ E++ G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D C++ LD + +++
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y APE + D++S G ++ E+I G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 116/283 (40%), Gaps = 34/283 (12%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQ--EIAVKRLSK---ISEQGLKELKNE 85
T + + + +KLG G FG V +G G+ +AVK L + + + E
Sbjct: 6 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
V L HRNL++L G + K+ + E SL + + +L R+ +
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 122
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTKRV 203
A G+ YL R IHRDL A N+LL KI DFGL RA D R
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHA--WKL 261
+ + + APE FS SD + FG+ L E+ + Y + + L G K+
Sbjct: 180 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKI 231
Query: 262 WNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
EG + C Q +N + + C P+DRP+
Sbjct: 232 DKEGERLPRPEDCPQDIYN---------VMVQCWAHKPEDRPT 265
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL---KELKNEVILFSKLQHRNLVKLLGC 103
+G+G +G V++G+ G+ +AVK S E+ EL N V+L +H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 104 CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH-----QDS 158
+ +T+ ++D + LD I+ A G+ +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE---GNTKRVIGTYGYMAPEYA 215
+ I HRDLK+ N+L+ ++ I+D GLA + GN RV GT YMAPE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-V 188
Query: 216 SDGQFSV-------KSDVFSFGILLLEI 236
D V + D+++FG++L E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LSK + + K E+ L
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 143
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 195
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
S D++S G +L E++S NR + + L+ + H + G PSQ
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 249
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 116/283 (40%), Gaps = 34/283 (12%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKGTL--VDGQ--EIAVKRLSK---ISEQGLKELKNE 85
T + + + +KLG G FG V +G G+ +AVK L + + + E
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
V L HRNL++L G + K+ + E SL + + +L R+ +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTKRV 203
A G+ YL R IHRDL A N+LL KI DFGL RA D R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHA--WKL 261
+ + + APE FS SD + FG+ L E+ + Y + + L G K+
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKI 227
Query: 262 WNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPS 304
EG + C Q +N + + C P+DRP+
Sbjct: 228 DKEGERLPRPEDCPQDIYN---------VMVQCWAHKPEDRPT 261
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 43/230 (18%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVD---GQEIAVKRLSKI--SEQGL 79
ELP T VS T+ +G G +G V + +D G+++A+K+LS+ SE
Sbjct: 21 ELP----KTYVSPTH-------VGSGAYGSV--CSAIDKRSGEKVAIKKLSRPFQSEIFA 67
Query: 80 KELKNEVILFSKLQHRNLVKLLGCCIQGE------EKLLIYEFMTN--KSLDSFIFDQER 131
K E++L +QH N++ LL + L+ FM + + F +E+
Sbjct: 68 KRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK 127
Query: 132 CKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 191
+ +++ +G+ Y+H ++HRDLK N+ +++D KI DFGLAR
Sbjct: 128 IQ--------YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-- 174
Query: 192 GGDETEGNTKRVIGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIISGK 240
+ + T Y APE S ++ D++S G ++ E+++GK
Sbjct: 175 ---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 47 LGQGGFGPVYKGTLVDGQE-IAVKRLSKISEQGLK-ELKNEVILFSKLQHRNLVKLLGCC 104
LG G F V Q+ +A+K ++K + +G + ++NE+ + K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
G LI + ++ L I ++ D S+ +I V YLH L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 165 RDLKASNVL---LDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEYASDGQF 220
RDLK N+L LD+D ISDFGL++ E G+ GT GY+APE + +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 221 SVKSDVFSFGILLLEIISG 239
S D +S G++ ++ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 138
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG----YV 190
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 138
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG----YV 190
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 25/207 (12%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHRNLVK 99
+ +G G +G V Y L Q++AVK+LS+ + + + E+ L L+H N++
Sbjct: 34 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 100 LL-----GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LL I+ ++ + + L++ + Q + D +F ++ RG+ Y+
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ---ALSDEHVQF-LVYQLLRGLKYI 147
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
H IIHRDLK SNV +++D +I DFGLAR +E G + T Y APE
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQ-ADEEMTG----YVATRWYRAPEI 199
Query: 215 ASDG-QFSVKSDVFSFGILLLEIISGK 240
+ ++ D++S G ++ E++ GK
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 136
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----YV 188
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQE-IAVKRLSKISEQGLK-ELKNEVILFSKLQHRNLV 98
+ LG G F V Q+ +A+K ++K + +G + ++NE+ + K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
L G LI + ++ L I ++ D S+ +I V YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD-- 134
Query: 159 RLRIIHRDLKASNVL---LDQDMNPKISDFGLARAFGGDETEGNT-KRVIGTYGYMAPEY 214
L I+HRDLK N+L LD+D ISDFGL++ E G+ GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEV 189
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
+ +S D +S G++ ++ G
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL---KELKNEVILFSKLQHRNLVKLLGC 103
+G+G +G V++G+ G+ +AVK S E+ EL N V+L +H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 104 CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH-----QDS 158
+ +T+ ++D + LD I+ A G+ +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE---GNTKRVIGTYGYMAPEYA 215
+ I HRDLK+ N+L+ ++ I+D GLA + GN RV GT YMAPE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVL 189
Query: 216 SDGQFSV-------KSDVFSFGILLLEI 236
D V + D+++FG++L E+
Sbjct: 190 -DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL---KELKNEVILFSKLQHRNLVKLLGC 103
+G+G +G V++G+ G+ +AVK S E+ EL N V+L +H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 99
Query: 104 CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH-----QDS 158
+ +T+ ++D + LD I+ A G+ +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 159
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE---GNTKRVIGTYGYMAPEYA 215
+ I HRDLK+ N+L+ ++ I+D GLA + GN RV GT YMAPE
Sbjct: 160 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVL 218
Query: 216 SDGQFSV-------KSDVFSFGILLLEI 236
D V + D+++FG++L E+
Sbjct: 219 -DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 36 SATNNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLS--KISEQGLKELKNEVILFSKL 92
S T+ + + ++LG+G F V + + GQE A K ++ K+S + ++L+ E + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+V+L + L+++ +T L I +E D S H I V
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVN 117
Query: 153 YLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H + I+HRDLK N+LL + K++DFGLA GD+ GT GY
Sbjct: 118 HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGY 172
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++PE + D+++ G++L ++ G
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 9 NISEKTENDQIQNIDLELPLFELATIVSATNNFSINKKLGQGGFGPV---YKGTLVDGQE 65
N+S+ ++Q ++++ F T++ N K +G G G V Y L +
Sbjct: 38 NMSKSKVDNQFYSVEVGDSTF---TVLKRYQNL---KPIGSGAQGIVCAAYDAVL--DRN 89
Query: 66 IAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLD 123
+A+K+LS+ ++ K E++L + H+N++ LL F K+L+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 137
Query: 124 SF--------IFDQERCKI----LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASN 171
F + D C++ LD + +++ G+ +LH IIHRDLK SN
Sbjct: 138 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 194
Query: 172 VLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGI 231
+++ D KI DFGLAR G T + T Y APE + D++S G
Sbjct: 195 IVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
Query: 232 LLLEIISGK 240
++ E++ K
Sbjct: 252 IMGEMVRHK 260
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 31/224 (13%)
Query: 25 ELPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVD---GQEIAVKRLSKI--SEQGL 79
ELP T VS T+ +G G +G V + +D G+++A+K+LS+ SE
Sbjct: 39 ELP----KTYVSPTH-------VGSGAYGSV--CSAIDKRSGEKVAIKKLSRPFQSEIFA 85
Query: 80 KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWS- 138
K E++L +QH N++ LL Y+F + D ++ +++S
Sbjct: 86 KRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL--VMPFMQTDLQKIMGMEFSE 143
Query: 139 -KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 197
K +++ +G+ Y+H ++HRDLK N+ +++D KI DFGLAR +
Sbjct: 144 EKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HAD 195
Query: 198 GNTKRVIGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIISGK 240
+ T Y APE S ++ D++S G ++ E+++GK
Sbjct: 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 38 TNNFSINKKLGQGGFGPVY--KGTLVDGQEIAVKRLSKISEQGLKE---LKNEVILFSKL 92
++ + KKLG G +G V K L G E A+K + K S L +EV + +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSL-DSFIFDQERCKILDWSKRFHIICGTARGV 151
H N++KL L+ E L D I Q+ ++ ++ GT
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT--- 118
Query: 152 MYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
YLH+ + I+HRDLK N+LL+ +D KI DFGL+ F E G K +GT
Sbjct: 119 -YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAY 171
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y+APE ++ K DV+S G++L ++ G
Sbjct: 172 YIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRLSK---ISEQGLKELKNEVILFSKLQH 94
++F I + +G+G FG V D +++ A+K ++K + ++ + E+ + L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----FDQERCKILDWSKRFHIICGTAR 149
LV L E+ ++ + + L + F +E K+ IC
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF--------ICELVM 126
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ YL RIIHRD+K N+LLD+ + I+DF +A A ET+ T + GT Y
Sbjct: 127 ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIA-AMLPRETQITT--MAGTKPY 180
Query: 210 MAPEYASDGQ---FSVKSDVFSFGILLLEIISGKK 241
MAPE S + +S D +S G+ E++ G++
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 23 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D C++ LD + +++
Sbjct: 81 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 128
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 129 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 182
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 9 NISEKTENDQIQNIDLELPLFELATIVSATNNFSINKKLGQGGFGPV---YKGTLVDGQE 65
N+S+ ++Q ++++ F T++ N K +G G G V Y L +
Sbjct: 38 NMSKSKVDNQFYSVEVGDSTF---TVLKRYQNL---KPIGSGAQGIVCAAYDAVL--DRN 89
Query: 66 IAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLD 123
+A+K+LS+ ++ K E++L + H+N++ LL F K+L+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 137
Query: 124 SF--------IFDQERCKI----LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASN 171
F + D C++ LD + +++ G+ +LH IIHRDLK SN
Sbjct: 138 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 194
Query: 172 VLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGI 231
+++ D KI DFGLAR G T + T Y APE + D++S G
Sbjct: 195 IVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
Query: 232 LLLEIISGK 240
++ E++ K
Sbjct: 252 IMGEMVRHK 260
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + Q K+ D +F +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQF-LI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 32 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D C++ LD + +++
Sbjct: 90 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 137
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 138 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMVPFVVTR 191
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y APE + D++S G ++ E+I G
Sbjct: 192 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 136
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----YV 188
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D C++ LD + +++
Sbjct: 82 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 183
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 27/172 (15%)
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNTKRV 203
ARG+ +L S + IHRDL A N+LL ++ KI DFGLAR + +G+T+
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS--GKKNRGFYHSDNNLNLIGHAWKL 261
+ +MAPE D +S KSDV+S+G+LL EI S G G ++ + +
Sbjct: 265 L---KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRL------ 315
Query: 262 WNEGMPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLG 313
EGM ++ P ++ E+ I L C + PK+RP ++ LG
Sbjct: 316 -REGM--RMRAP----EYSTPEI---YQIMLDCWHRDPKERPRFAELVEKLG 357
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGTLV------DGQEIAVKRLSK-ISEQGLKELKNEVILF 89
A + K LG+G FG V + + + +AVK L + + K L E+ +
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKIL 84
Query: 90 SKL-QHRNLVKLLGCCI-QGEEKLLIYEFMTNKSLDSFI 126
+ + H N+V LLG C QG ++I E+ +L +++
Sbjct: 85 THIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 142
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----YV 194
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D C++ LD + +++
Sbjct: 82 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 183
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 137
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 189
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----XV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + + +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ + + ++ + + L + + RG+ Y+H + ++H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 228 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 275
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 46 KLGQGGFGPVYKGTLVD-GQEIAVKR-LSKISEQGLKELK-NEVILFSKLQHRNLVKLLG 102
K+G+G +G V+K D GQ +A+K+ L + +K++ E+ + +L+H NLV LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 103 CCIQGEEKLLIYEFMTN---KSLDSFI--FDQERCKILDWSKRFHIICGTARGVMYLHQD 157
+ L++E+ + LD + + K + W T + V + H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHKH 121
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE-YAS 216
+ IHRD+K N+L+ + K+ DFG AR G + + + T Y +PE
Sbjct: 122 N---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVG 176
Query: 217 DGQFSVKSDVFSFGILLLEIISG 239
D Q+ DV++ G + E++SG
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 38 TNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLK---ELKNEVILFSKLQ 93
++ + + + LG GG V+ L +++AVK L + + E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 94 HRNLVKLLGC----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
H +V + G ++ E++ +L + + + + +I +
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQ 127
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYG 208
+ + HQ+ IIHRD+K +N+++ K+ DFG+ARA + T VIGT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y++PE A +SDV+S G +L E+++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 154
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 155 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 206
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 133
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 185
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D C++ LD + +++
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 137
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 189
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D C++ LD + +++
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 137
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG----YV 189
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 136
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 188
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 138
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 190
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D ++ LD + +++
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y APE + D++S G+++ E+I G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 136
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 188
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 259
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 15 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 130
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 131 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 182
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 36 SATNNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLS--KISEQGLKELKNEVILFSKL 92
S T+ + + ++LG+G F V + + GQE A K ++ K+S + ++L+ E + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H N+V+L + L+++ +T L I +E D S H I V
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVN 117
Query: 153 YLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ H + I+HRDLK N+LL + K++DFGLA GD+ GT GY
Sbjct: 118 HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGY 172
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++PE + D+++ G++L ++ G
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 29 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D C++ LD + +++
Sbjct: 87 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 134
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 135 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 188
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 189 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 151
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 203
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 128
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 180
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVVAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D ++ LD + +++
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y APE + D++S G+++ E+I G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 143
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 195
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 143
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 195
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 31 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D C++ LD + +++
Sbjct: 89 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 190
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 31 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D C++ LD + +++
Sbjct: 89 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 190
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 133
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 185
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 128
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 180
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 133
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG----YV 185
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 127
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 179
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + Q K+ D +F +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQF-LI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 133
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 185
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 49/290 (16%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 96
+SI K++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+++L I + IY M ++D + +++ I W ++ + V +HQ
Sbjct: 90 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 145
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
I+H DLK +N L+ M K+ DFG+A D T +GT YM PE
Sbjct: 146 HG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201
Query: 217 DGQFSVKS-----------DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
D S ++ DV+S G +L + GK F N ++ + HA
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA------- 251
Query: 266 MPSQLIDPCIQGSF------NLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+IDP + F +L +V++C C+++ PK R S+P ++
Sbjct: 252 ----IIDPNHEIEFPDIPEKDLQDVLKC------CLKRDPKQRISIPELL 291
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 142
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 194
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 14 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 129
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 130 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 181
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 150
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGLAR DE G +
Sbjct: 151 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YV 202
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 259
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 210 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 257
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 41 FSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKIS-EQGLKELKNEVILFSKLQHRNLV 98
+ +++ +G GGF V ++ G+ +A+K + K + L +K E+ L+H+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + ++ E+ L +I Q+R + F I V Y+H
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQI---VSAVAYVHSQG 128
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
HRDLK N+L D+ K+ DFGL G++ + + + G+ Y APE
Sbjct: 129 ---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-DYHLQTCCGSLAYAAPELIQGK 184
Query: 219 QF-SVKSDVFSFGILLLEIISG 239
+ ++DV+S GILL ++ G
Sbjct: 185 SYLGSEADVWSMGILLYVLMCG 206
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 49/290 (16%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 96
+SI K++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+++L I + IY M ++D + +++ I W ++ + V +HQ
Sbjct: 74 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 129
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
I+H DLK +N L+ M K+ DFG+A D T +GT YM PE
Sbjct: 130 HG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 185
Query: 217 DGQFSVKS-----------DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
D S ++ DV+S G +L + GK F N ++ + HA
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA------- 235
Query: 266 MPSQLIDPCIQGSF------NLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+IDP + F +L +V++C C+++ PK R S+P ++
Sbjct: 236 ----IIDPNHEIEFPDIPEKDLQDVLKC------CLKRDPKQRISIPELL 275
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 139 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD-ETE 197
+ +I + + + HQ+ IIHRD+K +N+++ K+ DFG+ARA +
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 198 GNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
T VIGT Y++PE A +SDV+S G +L E+++G+
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 152
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 213 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 260
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 153
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 214 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 261
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 144
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 205 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 252
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 259
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 43 INKKLGQGGFGPVYKGTLVD----GQ----EIAVKRLSKISEQGLKELKNEVILFSKLQH 94
N+ LGQG F ++KG + GQ E+ +K L K + + SKL H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
++LV G C+ G+E +L+ EF+ SLD+++ + C + W + + A + +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 155 HQDSRLRIIHRDLKASNVLL--DQDM---NP---KISDFGLARAFGGDETEGNTKRVIGT 206
+++ +IH ++ A N+LL ++D NP K+SD G++ + +
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI------LQER 180
Query: 207 YGYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
++ PE + + ++ +D +SFG L EI SG D L+ + KL
Sbjct: 181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSG--------GDKPLSALDSQRKLQFYE 232
Query: 266 MPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGS 314
QL P + LA +I C+ P RPS ++I L S
Sbjct: 233 DRHQLPAP---KAAELANLINN------CMDYEPDHRPSFRAIIRDLNS 272
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 49/290 (16%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 96
+SI K++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+++L I + IY M ++D + +++ I W ++ + V +HQ
Sbjct: 70 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 125
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
I+H DLK +N L+ M K+ DFG+A D T +GT YM PE
Sbjct: 126 HG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 181
Query: 217 DGQFSVKS-----------DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
D S ++ DV+S G +L + GK F N ++ + HA
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA------- 231
Query: 266 MPSQLIDPCIQGSF------NLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+IDP + F +L +V++C C+++ PK R S+P ++
Sbjct: 232 ----IIDPNHEIEFPDIPEKDLQDVLKC------CLKRDPKQRISIPELL 271
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 28/216 (12%)
Query: 39 NNFSINKKLGQGGFGPVYK----GTLVDGQEIAVK-----RLSKISEQGL--KELKNEVI 87
+++ + ++LG G F V K GT G+E A K RLS S +G+ +E++ EV
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSS-SRRGVSREEIEREVN 60
Query: 88 LFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGT 147
+ +++H N++ L + +LI E ++ L F+ ++E L + +
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQI 117
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLARAFGGDETEGNTKRV 203
GV YLH RI H DLK N+ LLD+++ NP+I DFG+A E K +
Sbjct: 118 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNI 171
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
GT ++APE + +++D++S G++ ++SG
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 145
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 206 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 253
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 28/216 (12%)
Query: 39 NNFSINKKLGQGGFGPVYK----GTLVDGQEIAVK-----RLSKISEQGL--KELKNEVI 87
+++ + ++LG G F V K GT G+E A K RLS S +G+ +E++ EV
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSS-SRRGVSREEIEREVN 67
Query: 88 LFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGT 147
+ +++H N++ L + +LI E ++ L F+ ++E L + +
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQI 124
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLARAFGGDETEGNTKRV 203
GV YLH RI H DLK N+ LLD+++ NP+I DFG+A E K +
Sbjct: 125 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNI 178
Query: 204 IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
GT ++APE + +++D++S G++ ++SG
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 211
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 259
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 152
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 212
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 213 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 260
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL---KELKNEVILFSKLQHRNLVKLLGC 103
+G+G +G V++G L G+ +AVK S EQ E+ N V+L +H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNILGFIAS 70
Query: 104 CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD-----S 158
+ +T+ ++D + + L+ + A G+ +LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETE-GNTKRVIGTYGYMAPEY- 214
+ I HRD K+ NVL+ ++ I+D GLA + G D + GN RV GT YMAPE
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAPEVL 189
Query: 215 ----ASDGQFSVK-SDVFSFGILLLEI 236
+D S K +D+++FG++L EI
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V +A+K++S Q + E+ + + +H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 165 RDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+L++ + KI DFGLAR A + G + T Y APE + + K
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTK 227
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 228 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 275
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V V+ +A+K++S Q + E+ + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQ 269
S D++S G +L E++S NR + + L+ + H + G PSQ
Sbjct: 210 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 251
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D C++ LD + +++
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 49/290 (16%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 96
+SI K++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+++L I + IY M ++D + +++ I W ++ + V +HQ
Sbjct: 71 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 126
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
I+H DLK +N L+ M K+ DFG+A D T +GT YM PE
Sbjct: 127 HG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182
Query: 217 DGQFSVKS-----------DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
D S ++ DV+S G +L + GK F N ++ + HA
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA------- 232
Query: 266 MPSQLIDPCIQGSF------NLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+IDP + F +L +V++C C+++ PK R S+P ++
Sbjct: 233 ----IIDPNHEIEFPDIPEKDLQDVLKC------CLKRDPKQRISIPELL 272
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 139 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD-ETE 197
+ +I + + + HQ+ IIHRD+K +N+++ K+ DFG+ARA +
Sbjct: 134 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 190
Query: 198 GNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
T VIGT Y++PE A +SDV+S G +L E+++G+
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 26/215 (12%)
Query: 39 NNFSINKKLGQGGFGPVYK----GTLVDGQEIAVKRLSK----ISEQGL--KELKNEVIL 88
+++ + ++LG G F V K GT G+E A K + K S +G+ +E++ EV +
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 89 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA 148
+++H N++ L + +LI E ++ L F+ ++E L + +
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQIL 139
Query: 149 RGVMYLHQDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLARAFGGDETEGNTKRVI 204
GV YLH RI H DLK N+ LLD+++ NP+I DFG+A E K +
Sbjct: 140 DGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNIF 193
Query: 205 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
GT ++APE + +++D++S G++ ++SG
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 39 NNFSINKKLGQGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
++F +LG G G V K G ++ + I ++ I Q ++EL+ + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ----VLHEC 71
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+V G E + E M SLD + + +R K + RG+
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK---VSIAVLRGLA 128
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YL + + +I+HRD+K SN+L++ K+ DFG++ G + +GT YMAP
Sbjct: 129 YLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAP 182
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E +SV+SD++S G+ L+E+ G+
Sbjct: 183 ERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 46 KLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRNLVKLLGC 103
KLG+G + VYKG + + +A+K + E+G EV L L+H N+V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 104 CIQGEEKLLIYEFMTNKSLDSFIFDQERC-KILDWSKRFHIICGTARGVMYLHQDSRLRI 162
+ L++E++ +K L ++ D C I++ + RG+ Y H R ++
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCH---RQKV 121
Query: 163 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE-YASDGQFS 221
+HRDLK N+L+++ K++DFGLARA T+ V+ T Y P+ +S
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARA-KSIPTKTYDNEVV-TLWYRPPDILLGSTDYS 179
Query: 222 VKSDVFSFGILLLEIISGK 240
+ D++ G + E+ +G+
Sbjct: 180 TQIDMWGVGCIFYEMATGR 198
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 100 LLGCCI------QGEEKLLIYEFMTNKSLDSFI---FDQERCKILDWSKRFHIICGTARG 150
LL + ++ L+ E M + +L I D ER L + ++CG
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYL----LYQMLCG---- 138
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYR 192
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGK 240
APE + D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI D+GLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 41 FSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLV 98
F + LG G F V G+ AVK + K + +G + ++NE+ + K++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
L L+ + ++ L I ++ D S +I V YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST---LIRQVLDAVYYLH--- 137
Query: 159 RLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
R+ I+HRDLK N+L D++ ISDFGL++ G + GT GY+APE
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV---MSTACGTPGYVAPEVL 194
Query: 216 SDGQFSVKSDVFSFGILLLEIISG 239
+ +S D +S G++ ++ G
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKIS-EQGLK-ELKNEVILFSKLQ 93
AT+ + ++G G +G VYK G +A+K + + E+GL EV L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 94 ---HRNLVKLLGCCIQGEEK-----LLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
H N+V+L+ C L++E + ++ L +++ D+ L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG 205
RG+ +LH + I+HRDLK N+L+ K++DFGLAR + + V+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAPVVV 173
Query: 206 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
T Y APE ++ D++S G + E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 49/290 (16%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 96
+SI K++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+++L I + IY M ++D + +++ I W ++ + V +HQ
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 173
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
I+H DLK +N L+ M K+ DFG+A D T +GT YM PE
Sbjct: 174 HG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 217 DGQFSVKS-----------DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
D S ++ DV+S G +L + GK F N ++ + HA
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA------- 279
Query: 266 MPSQLIDPCIQGSF------NLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+IDP + F +L +V++C C+++ PK R S+P ++
Sbjct: 280 ----IIDPNHEIEFPDIPEKDLQDVLKC------CLKRDPKQRISIPELL 319
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKIS-EQGLK-ELKNEVILFSKLQ 93
AT+ + ++G G +G VYK G +A+K + + E+GL EV L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 94 ---HRNLVKLLGCCIQGEEK-----LLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
H N+V+L+ C L++E + ++ L +++ D+ L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG 205
RG+ +LH + I+HRDLK N+L+ K++DFGLAR + + V+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVV 173
Query: 206 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
T Y APE ++ D++S G + E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D C++ LD + +++
Sbjct: 82 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 183
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 184 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRL---SKISEQGLK-ELKNEVILFSKLQH 94
++F I + LG+G FG VY I ++ S+I ++G++ +L+ E+ + + L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSL-----DSFIFDQERCKILDWSKRFHIICGTAR 149
N+++L LI E+ L S FD++R I+ A
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT--------IMEELAD 134
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+MY H ++IHRD+K N+LL KI+DFG + K + GT Y
Sbjct: 135 ALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTLDY 187
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
+ PE + K D++ G+L E++ G N F + +N
Sbjct: 188 LPPEMIEGRMHNEKVDLWCIGVLCYELLVG--NPPFESASHN 227
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGTLVD--GQEIAVKRLS-KISEQG--LKELKNEVIL 88
+ A + ++G+G +G V+K + G+ +A+KR+ + E+G L ++ +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 89 --FSKLQHRNLVKLLGCCIQG----EEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRF 141
+H N+V+L C E KL L++E + DQ+ LD
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP 115
Query: 142 HIICGTA--------RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
+ T RG+ +LH R++HRDLK N+L+ K++DFGLAR +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS- 171
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
+ V+ T Y APE ++ D++S G + E+ K
Sbjct: 172 --FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A++++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMPSQLIDPCI 275
S D++S G +L E++S NR + + L+ + H + G PSQ CI
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQEDLNCI 259
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 106/268 (39%), Gaps = 72/268 (26%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRN 96
+F + +G+GGFG V++ VD A+KR+ + + +E + EV +KL+H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 97 LVKLLGCCIQGE--------EKLLIYEFMTNKSLDS------------------------ 124
+V+ ++ +++ + + T+ L S
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 125 ---------FIFDQ-ERCK---ILDWSKR------------FHIICGTARGVMYLHQDSR 159
+++ Q + C+ + DW R HI A V +LH
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG- 184
Query: 160 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYG----------Y 209
++HRDLK SN+ D K+ DFGL A DE E + Y Y
Sbjct: 185 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLY 242
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEII 237
M+PE +S K D+FS G++L E++
Sbjct: 243 MSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 35 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D C++ LD + +++
Sbjct: 93 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 140
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 141 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 194
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 195 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D C++ LD + +++
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + + T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 142 HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 198
H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 194 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250
Query: 199 NTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 78
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI 126
L H N+V LLG C + G ++I EF +L +++
Sbjct: 79 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 142 HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 198
H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 192 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 248
Query: 199 NTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 249 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 76
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI 126
L H N+V LLG C + G ++I EF +L +++
Sbjct: 77 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 142 HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 198
H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 199 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 255
Query: 199 NTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 256 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 83
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI 126
L H N+V LLG C + G ++I EF +L +++
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + Q K+ D +F +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ---KLTDDHVQF-LI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DFGL R DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 142 HIICGT---ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 198
H+IC + A+G+ +L + + IHRDL A N+LL + KI DFGLAR D
Sbjct: 201 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 257
Query: 199 NTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIIS 238
+MAPE D ++++SDV+SFG+LL EI S
Sbjct: 258 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKG------TLVDGQEIAVKRLSKISEQG-----LKELKNEVI 87
+ + K LG+G FG V + + +AVK L + + + ELK I
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 85
Query: 88 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMTNKSLDSFI 126
L H N+V LLG C + G ++I EF +L +++
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 49/290 (16%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 96
+SI K++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+++L I + IY M ++D + +++ I W ++ + V +HQ
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 173
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
I+H DLK +N L+ M K+ DFG+A D T +GT YM PE
Sbjct: 174 HG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 217 DGQFSVKS-----------DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
D S ++ DV+S G +L + GK F N ++ + HA
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA------- 279
Query: 266 MPSQLIDPCIQGSF------NLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+IDP + F +L +V++C C+++ PK R S+P ++
Sbjct: 280 ----IIDPNHEIEFPDIPEKDLQDVLKC------CLKRDPKQRISIPELL 319
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 39/243 (16%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGTLVD--GQEIAVKRLS-KISEQG--LKELKNEVIL 88
+ A + ++G+G +G V+K + G+ +A+KR+ + E+G L ++ +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 89 --FSKLQHRNLVKLLGCCIQG----EEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRF 141
+H N+V+L C E KL L++E + DQ+ LD
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP 115
Query: 142 HIICGTA--------RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
+ T RG+ +LH R++HRDLK N+L+ K++DFGLAR +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS- 171
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLN 253
+ V+ T Y APE ++ D++S G + E+ + + + ++++
Sbjct: 172 --FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF---RRKPLFRGSSDVD 226
Query: 254 LIG 256
+G
Sbjct: 227 QLG 229
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 45/289 (15%)
Query: 43 INKKLGQGGFGPVYKGTLVD----GQ----EIAVKRLSKISEQGLKELKNEVILFSKLQH 94
N+ LGQG F ++KG + GQ E+ +K L K + + SKL H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
++LV G C G+E +L+ EF+ SLD+++ + C + W + + A + +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 155 HQDSRLRIIHRDLKASNVLL--DQDM---NP---KISDFGLARAFGGDETEGNTKRVIGT 206
+++ +IH ++ A N+LL ++D NP K+SD G++ + +
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI------LQER 180
Query: 207 YGYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
++ PE + + ++ +D +SFG L EI SG D L+ + KL
Sbjct: 181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSG--------GDKPLSALDSQRKLQFYE 232
Query: 266 MPSQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGS 314
QL P + LA +I C+ P RPS ++I L S
Sbjct: 233 DRHQLPAP---KAAELANLINN------CMDYEPDHRPSFRAIIRDLNS 272
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI DF LAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 39/243 (16%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGTLVD--GQEIAVKRLS-KISEQG--LKELKNEVIL 88
+ A + ++G+G +G V+K + G+ +A+KR+ + E+G L ++ +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 89 --FSKLQHRNLVKLLGCCIQG----EEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRF 141
+H N+V+L C E KL L++E + DQ+ LD
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP 115
Query: 142 HIICGTA--------RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
+ T RG+ +LH R++HRDLK N+L+ K++DFGLAR +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS- 171
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLN 253
+ V+ T Y APE ++ D++S G + E+ + + + ++++
Sbjct: 172 --FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF---RRKPLFRGSSDVD 226
Query: 254 LIG 256
+G
Sbjct: 227 QLG 229
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 37/212 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F KSL+ F + D ++ LD + +++
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
Y APE + D++S G ++ E+I G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHR 95
+ F++ KK + G Y + KR +K S +G+ ++++ EV + ++QH
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIK------KRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
N++ L + +LI E + L F+ ++E + ++ I GV YLH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLH 131
Query: 156 QDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLARA--FGGDETEGNTKRVIGTYGY 209
L+I H DLK N+ LLD+++ P+I DFGLA FG + K + GT +
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTPAF 183
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 31/209 (14%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 100 LLGCCI------QGEEKLLIYEFMTNKSLDSFI---FDQERCKILDWSKRFHIICGTARG 150
LL + ++ ++ E M + +L I D ER L + ++CG
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYL----LYQMLCG---- 138
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYR 192
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE + D++S G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 10/215 (4%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 104
+G+G +G V ++ +A+K++S Q + E+ + + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + ++ +++ ++ + + L + + RG+ Y+H + ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 145
Query: 165 RDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTKRVIGTYGYMAPEYASDGQFSVK 223
RDLK SN+LL+ + KI DFGLAR D + G + T Y APE + + K
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 224 S-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGH 257
S D++S G +L E++S NR + + L+ + H
Sbjct: 206 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNH 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D ++ LD + +++
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTLVDGQE-IAVKRLSKISEQGLKELKNEVILFSKLQHRN 96
++ F + +LG+G VY+ Q+ A+K L K ++ K ++ E+ + +L H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
++KL E L+ E +T L I ++ D + I V YLH+
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL---EAVAYLHE 166
Query: 157 DSRLRIIHRDLKASNVLLDQ---DMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
+ I+HRDLK N+L D KI+DFGL++ E + K V GT GY APE
Sbjct: 167 NG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPE 220
Query: 214 YASDGQFSVKSDVFSFGILLLEIISG 239
+ + D++S GI+ ++ G
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 37 ATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKIS-EQGLK-ELKNEVILFSKLQ 93
AT+ + ++G G +G VYK G +A+K + + E+GL EV L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 94 ---HRNLVKLLGCCIQGEEK-----LLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
H N+V+L+ C L++E + ++ L +++ D+ L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 146 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG 205
RG+ +LH + I+HRDLK N+L+ K++DFGLAR + + V+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVV 173
Query: 206 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
T Y APE ++ D++S G + E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 31/209 (14%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 100 LLGCCI------QGEEKLLIYEFMTNKSLDSFI---FDQERCKILDWSKRFHIICGTARG 150
LL + ++ ++ E M + +L I D ER L + ++CG
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYL----LYQMLCG---- 138
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYR 192
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE + D++S G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 41 FSINKKLGQGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQ 93
+ ++LG G F V K L + KR +K S +G+ ++++ EV + ++Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E + L F+ ++E L + + GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTY 207
LH L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTP 181
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++APE + +++D++S G++ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 40 NFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
F + LG G F V+ + G+ A+K + K L+NE+ + K++H N+V
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
L L+ + ++ L I ++ D S +I V YLH++
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHENG 126
Query: 159 RLRIIHRDLKASNVL-LDQDMNPKI--SDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA 215
I+HRDLK N+L L + N KI +DFGL++ E G GT GY+APE
Sbjct: 127 ---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVL 179
Query: 216 SDGQFSVKSDVFSFGILLLEIISG 239
+ +S D +S G++ ++ G
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 39 NNFSINKKLGQGGFGPV--------------YKGTLVDGQEIAVKRLS-KIS-EQGLKEL 82
N++ I + L QG F + Y+ +L++ + K + KIS + +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 83 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSL---DSFIF--DQERCKILDW 137
KNE+ + + +++ + G +E +IYE+M N S+ D + F D+ +
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 138 SKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 197
II Y+H + I HRD+K SN+L+D++ K+SDFG + + +
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK 208
Query: 198 GNTKRVIGTYGYMAPEYASD--GQFSVKSDVFSFGILL 233
G+ GTY +M PE+ S+ K D++S GI L
Sbjct: 209 GSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHR 95
+ F++ KK + G Y + KR +K S +G+ ++++ EV + ++QH
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIK------KRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
N++ L + +LI E + L F+ ++E + ++ I GV YLH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLH 131
Query: 156 QDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTYGY 209
L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT +
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTPEF 183
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 31/209 (14%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 100 LLGCCI------QGEEKLLIYEFMTNKSLDSFI---FDQERCKILDWSKRFHIICGTARG 150
LL + ++ ++ E M + +L I D ER L + ++CG
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYL----LYQMLCG---- 138
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYR 192
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE + D++S G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHR 95
+ F++ KK + G Y + KR +K S +G+ ++++ EV + ++QH
Sbjct: 20 SGQFAVVKKCREKSTGLQYAAKFIK------KRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
N++ L + +LI E + L F+ ++E + ++ I GV YLH
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLH 130
Query: 156 QDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTYGY 209
L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT +
Sbjct: 131 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTPEF 182
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 49/290 (16%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 96
+SI K++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+++L I + IY M ++D + +++ I W ++ + V +HQ
Sbjct: 90 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 145
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
I+H DLK +N L+ M K+ DFG+A D +GT YM PE
Sbjct: 146 HG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIK 201
Query: 217 DGQFSVKS-----------DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
D S ++ DV+S G +L + GK F N ++ + HA
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA------- 251
Query: 266 MPSQLIDPCIQGSF------NLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+IDP + F +L +V++C C+++ PK R S+P ++
Sbjct: 252 ----IIDPNHEIEFPDIPEKDLQDVLKC------CLKRDPKQRISIPELL 291
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 41 FSINKKLGQGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQ 93
+ ++LG G F V K L + KR +K S +G+ ++++ EV + ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E + L F+ ++E + ++ I GV Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYY 128
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTY 207
LH L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTP 180
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++APE + +++D++S G++ ++SG
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 41 FSINKKLGQGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQ 93
+ ++LG G F V K L + KR +K S +G+ ++++ EV + ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E + L F+ ++E + ++ I GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYY 129
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTY 207
LH L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTP 181
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++APE + +++D++S G++ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 25/207 (12%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHRNLV 98
F++ KK + G Y + KR +K S +G+ ++++ EV + ++QH N++
Sbjct: 24 FAVVKKCREKSTGLQYAAKFIK------KRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
L + +LI E + L F+ ++E + ++ I GV YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLHS-- 132
Query: 159 RLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTYGYMAP 212
L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT ++AP
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTPEFVAP 186
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISG 239
E + +++D++S G++ ++SG
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 41 FSINKKLGQGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQ 93
+ ++LG G F V K L + KR +K S +G+ ++++ EV + ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E + L F+ ++E L + + GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTY 207
LH L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTP 181
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++APE + +++D++S G++ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 41 FSINKKLGQGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQ 93
+ ++LG G F V K L + KR +K S +G+ ++++ EV + ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E + L F+ ++E + ++ I GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYY 129
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTY 207
LH L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTP 181
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++APE + +++D++S G++ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
N F K LG+G FG V I VK + +K LK EVI+ L
Sbjct: 148 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 99 --KLLGCCIQGEEKLLIYEFMTNKSL---------DSFIFDQERCKILDWSKRFHIICGT 147
++L L Y F T+ L F R ++ +
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 257
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
+ YLH S +++RDLK N++LD+D + KI+DFGL + G + K GT
Sbjct: 258 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKTFCGTP 313
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
Y+APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 355
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 41 FSINKKLGQGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQ 93
+ ++LG G F V K L + KR +K S +G+ ++++ EV + ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E + L F+ ++E L + + GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTY 207
LH L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTP 181
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++APE + +++D++S G++ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHR 95
+ F++ KK + G Y + KR +K S +G+ ++++ EV + ++QH
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIK------KRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
N++ L + +LI E + L F+ ++E + ++ I GV YLH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLH 131
Query: 156 QDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLARA--FGGDETEGNTKRVIGTYGY 209
L+I H DLK N+ LLD+++ P+I DFGLA FG + K + GT +
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTPEF 183
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQE----IAVKRLSKI----SEQGLKELKNEVILFSKL 92
F + + LG+GG+G V++ V G A+K L K + + K E + ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H +V L+ G + LI E+++ L ER I + + +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+LHQ II+RDLK N++L+ + K++DFGL + D T +T GT YMAP
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYMAP 190
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISG 239
E + D +S G L+ ++++G
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 41 FSINKKLGQGGFGPVYK-----GTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQ 93
+ ++LG G F V K L + KR +K S +G+ ++++ EV + ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E + L F+ ++E + ++ I GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYY 129
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTY 207
LH L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTP 181
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
++APE + +++D++S G++ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 39 NNFSINKKLGQGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
++F +LG G G V+K G ++ + I ++ I Q ++EL+ + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 64
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+V G E + E M SLD + R K + +G+
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLT 121
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YL + + +I+HRD+K SN+L++ K+ DFG++ G + +GT YM+P
Sbjct: 122 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSP 175
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGKKNR 243
E +SV+SD++S G+ L+E+ G+ R
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPR 206
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D ++ LD + +++
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 37/213 (17%)
Query: 45 KKLGQGGFGPV---YKGTLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVK 99
K +G G G V Y L + +A+K+LS+ ++ K E++L + H+N++
Sbjct: 23 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 100 LLGCCIQGEEKLLIYEFMTNKSLDSF--------IFDQERCKI----LDWSKRFHIICGT 147
LL F K+L+ F + D ++ LD + +++
Sbjct: 81 LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 128
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
G+ +LH IIHRDLK SN+++ D KI DFGLAR G T + T
Sbjct: 129 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTR 182
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
Y APE + D++S G ++ E++ K
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
N F K LG+G FG V I VK + +K LK EVI+ L
Sbjct: 151 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 99 --KLLGCCIQGEEKLLIYEFMTNKSL---------DSFIFDQERCKILDWSKRFHIICGT 147
++L L Y F T+ L F R ++ +
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 260
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
+ YLH S +++RDLK N++LD+D + KI+DFGL + G + K GT
Sbjct: 261 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKTFCGTP 316
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
Y+APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 358
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
N F K LG+G FG V I VK + +K LK EVI+ L
Sbjct: 9 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 58
Query: 99 --KLLGCCIQGEEKLLIYEFMTNKSL---------DSFIFDQERCKILDWSKRFHIICGT 147
++L L Y F T+ L F R ++ +
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 118
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
+ YLH S +++RDLK N++LD+D + KI+DFGL + G + K GT
Sbjct: 119 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKXFCGTP 174
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
Y+APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHR 95
+ F++ KK + G Y + KR +K S +G+ ++++ EV + ++QH
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIK------KRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
N++ L + +LI E + L F+ ++E + ++ I GV YLH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLH 131
Query: 156 QDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLARA--FGGDETEGNTKRVIGTYGY 209
L+I H DLK N+ LLD+++ P+I DFGLA FG + K + GT +
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTPEF 183
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
N F K LG+G FG V I VK + +K LK EVI+ L
Sbjct: 10 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 59
Query: 99 --KLLGCCIQGEEKLLIYEFMTNKSL---------DSFIFDQERCKILDWSKRFHIICGT 147
++L L Y F T+ L F R ++ +
Sbjct: 60 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 119
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
+ YLH S +++RDLK N++LD+D + KI+DFGL + G + K GT
Sbjct: 120 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKXFCGTP 175
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
Y+APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 217
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
N F K LG+G FG V I VK + +K LK EVI+ L
Sbjct: 8 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 57
Query: 99 --KLLGCCIQGEEKLLIYEFMTNKSL---------DSFIFDQERCKILDWSKRFHIICGT 147
++L L Y F T+ L F R ++ +
Sbjct: 58 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 117
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
+ YLH S +++RDLK N++LD+D + KI+DFGL + G + K GT
Sbjct: 118 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKXFCGTP 173
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
Y+APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 215
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 90
I+ ++ + + K +G G FG + D Q +AVK + + E+ + +K E+I
Sbjct: 14 IMHDSDRYELVKDIGAGNFG--VARLMRDKQANELVAVKYIER-GEKIDENVKREIINHR 70
Query: 91 KLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L+H N+V+ + ++ E+ + L I + R + RF G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 127
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTKRVIGTYG 208
V Y H +++ HRDLK N LLD P KI+DFG ++A K +GT
Sbjct: 128 VSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SVLHSQPKSAVGTPA 181
Query: 209 YMAPEYASDGQFSVK-SDVFSFGILLLEIISG 239
Y+APE ++ K +DV+S G+ L ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGC-----CIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL ++ + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI FGLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI D GLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 39 NNFSINKKLGQGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
++F +LG G G V+K G ++ + I ++ I Q ++EL+ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+V G E + E M SLD + R K + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLT 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YL + + +I+HRD+K SN+L++ K+ DFG++ G + +GT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E +SV+SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI D GLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGL--KELKNEVILFSKLQHR 95
+ F++ KK + G Y + KR +K S +G+ ++++ EV + ++QH
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKFIK------KRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLH 155
N++ L + +LI E + L F+ ++E + ++ I GV YLH
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN---GVYYLH 131
Query: 156 QDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTKRVIGTYGY 209
L+I H DLK N+ LLD+++ KI DFGLA FG + K + GT +
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTPEF 183
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQE----IAVKRLSKI----SEQGLKELKNEVILFSKL 92
F + + LG+GG+G V++ V G A+K L K + + K E + ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+H +V L+ G + LI E+++ L ER I + + +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
+LHQ II+RDLK N++L+ + K++DFGL + D T T GT YMAP
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAP 190
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISG 239
E + D +S G L+ ++++G
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 49/290 (16%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVK--RLSKISEQGLKELKNEVILFSKLQHRN-- 96
+SI K++G GG V++ Q A+K L + Q L +NE+ +KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 97 LVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQ 156
+++L I + IY M ++D + +++ I W ++ + V +HQ
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 173
Query: 157 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYAS 216
I+H DLK +N L+ M K+ DFG+A D T +G YM PE
Sbjct: 174 HG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229
Query: 217 DGQFSVKS-----------DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEG 265
D S ++ DV+S G +L + GK F N ++ + HA
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA------- 279
Query: 266 MPSQLIDPCIQGSF------NLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 309
+IDP + F +L +V++C C+++ PK R S+P ++
Sbjct: 280 ----IIDPNHEIEFPDIPEKDLQDVLKC------CLKRDPKQRISIPELL 319
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 39 NNFSINKKLGQGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
++F +LG G G V+K G ++ + I ++ I Q ++EL+ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+V G E + E M SLD + R K + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLT 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YL + + +I+HRD+K SN+L++ K+ DFG++ G + +GT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E +SV+SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSKLQHR 95
+F + + +G+G + V L I R+ K ++ + ++ E +F + +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 96 NLVKLLGCCIQGEEKLL-IYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
+ L C Q E +L + E++ L +F +R + L + + YL
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
H+ II+RDLK NVLLD + + K++D+G+ + G T GT Y+APE
Sbjct: 170 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTFCGTPNYIAPEI 224
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
+ D ++ G+L+ E+++G+ S +N
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 261
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 39 NNFSINKKLGQGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
++F +LG G G V+K G ++ + I ++ I Q ++EL+ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+V G E + E M SLD + R K + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLT 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YL + + +I+HRD+K SN+L++ K+ DFG++ G + +GT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E +SV+SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEI-AVKR--LSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
+K+G+G +G V+K + EI A+KR L E E+ L +L+H+N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 102 GCCIQGEEKLLIYEFMT---NKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
++ L++EF K DS D LD + +G+ + H +
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGD------LDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
++HRDLK N+L++++ K++DFGLARAFG + V+ T Y P+
Sbjct: 122 ---VLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGA 176
Query: 219 Q-FSVKSDVFSFGILLLEIISGKK 241
+ +S D++S G + E+ + +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAAR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 95
++F +LG G G V+K + + ++L I + ++N++I ++ H
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKL--IHLEIKPAIRNQIIRELQVLHECNS 125
Query: 96 -NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
+V G E + E M SLD + R K + +G+ YL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 182
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
+ + +I+HRD+K SN+L++ K+ DFG++ G + +GT YM+PE
Sbjct: 183 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 236
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+SV+SD++S G+ L+E+ G+
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 39 NNFSINKKLGQGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
++F +LG G G V+K G ++ + I ++ I Q ++EL+ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+V G E + E M SLD + R K + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLT 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YL + + +I+HRD+K SN+L++ K+ DFG++ G + +GT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E +SV+SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 39 NNFSINKKLGQGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
++F +LG G G V+K G ++ + I ++ I Q ++EL+ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+V G E + E M SLD + R K + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLT 118
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YL + + +I+HRD+K SN+L++ K+ DFG++ G + +GT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E +SV+SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 38 TNNFSINKKLGQGGFGP----VYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 93
++ + + + +G G + V+K T E AVK + K +E++ IL Q
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIE---ILLRYGQ 79
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L G+ L+ E M L I Q+ + S H I + V Y
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTI---GKTVEY 136
Query: 154 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH ++HRDLK SN+L +D+ NP +I DFG A+ + G T +
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTPCYTANF 191
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + D++S GILL +++G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 33 TIVSATNNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGL--KELKNEVILF 89
TI + +G G +G V G +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 90 SKLQHRNLVKLLGCCIQGEE-----KLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHII 144
++H N++ LL + + + L++ + +C+ L +I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLI 131
Query: 145 CGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
RG+ Y+H IIHRDLK SN+ +++D KI D GLAR DE G +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-HTDDEMTG----YV 183
Query: 205 GTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIISGK 240
T Y APE + ++ D++S G ++ E+++G+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRLSK---ISEQGLKELKNEVILFSKLQH 94
+F+ LG+G FG V +E+ A+K L K I + ++ E + + L
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 95 RNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
+ L C Q ++L + E++ L I Q+ K + F+ + G+ +
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYA-AEISIGLFF 135
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
LH+ II+RDLK NV+LD + + KI+DFG+ + D T+ GT Y+APE
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGTPDYIAPE 190
Query: 214 YASDGQFSVKSDVFSFGILLLEIISGK 240
+ + D +++G+LL E+++G+
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 38 TNNFSINKKLGQGGFGP----VYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 93
T+ + + + +G G + ++K T E AVK + K +E++ IL Q
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKAT---NMEFAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L G+ ++ E M L I Q K + ++ + V Y
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEY 131
Query: 154 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH ++HRDLK SN+L +D+ NP +I DFG A+ + G T +
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLMTPCYTANF 186
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + D++S G+LL +++G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 37 ATNNFSINKKLGQGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFS 90
AT+ + ++G G +G VYK G V + + V EV L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 91 KLQ---HRNLVKLLGCCIQGEEK-----LLIYEFMTNKSLDSFIFDQERCKILDWSKRFH 142
+L+ H N+V+L+ C L++E + ++ L +++ D+ L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKR 202
++ RG+ +LH + I+HRDLK N+L+ K++DFGLAR + +
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALTP 178
Query: 203 VIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISGK 240
V+ T Y APE ++ D++S G + E+ K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 38 TNNFSINKKLGQGGFGP----VYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 93
++ + + + +G G + V+K T E AVK + K +E++ IL Q
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIE---ILLRYGQ 79
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L G+ L+ E M L I Q+ + S H I + V Y
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTI---GKTVEY 136
Query: 154 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH ++HRDLK SN+L +D+ NP +I DFG A+ + G T +
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTPCYTANF 191
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + D++S GILL +++G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 39 NNFSINKKLGQGGFGPVYK------GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKL 92
++F +LG G G V+K G ++ + I ++ I Q ++EL+ + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 88
Query: 93 QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+V G E + E M SLD + R K + +G+
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLT 145
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YL + + +I+HRD+K SN+L++ K+ DFG++ G + +GT YM+P
Sbjct: 146 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 199
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISGK 240
E +SV+SD++S G+ L+E+ G+
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHR--- 95
++F +LG G G V+K + + ++L + + ++N++I ++ H
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 82
Query: 96 -NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
+V G E + E M SLD + R K + +G+ YL
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 139
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
+ + +I+HRD+K SN+L++ K+ DFG++ G + +GT YM+PE
Sbjct: 140 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 193
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGK 240
+SV+SD++S G+ L+E+ G+
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 39 NNFSINKKLGQGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 91
N+F K LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YLH +++RD+K N++LD+D + KI+DFGL + G K GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKXFCGTPEYL 172
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 211
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 39 NNFSINKKLGQGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 91
N+F K LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
+H L L Q ++L + E+ L F R ++ +
Sbjct: 67 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 122
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YLH +++RD+K N++LD+D + KI+DFGL + G K GT Y+
Sbjct: 123 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKXFCGTPEYL 177
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 39 NNFSINKKLGQGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 91
N+F K LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YLH +++RD+K N++LD+D + KI+DFGL + G K GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKXFCGTPEYL 172
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 211
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 39 NNFSINKKLGQGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 91
N+F K LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YLH +++RD+K N++LD+D + KI+DFGL + G K GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKXFCGTPEYL 172
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 211
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSKLQHR 95
+F + + +G+G + V L I ++ K ++ + ++ E +F + +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 96 NLVKLLGCCIQGEEKLL-IYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
+ L C Q E +L + E++ L +F +R + L + + YL
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
H+ II+RDLK NVLLD + + K++D+G+ + G T GT Y+APE
Sbjct: 127 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEI 181
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
+ D ++ G+L+ E+++G+ S +N
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 218
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 39 NNFSINKKLGQGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 91
N+F K LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YLH +++RD+K N++LD+D + KI+DFGL + G K GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKTFCGTPEYL 172
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHE 211
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 47 LGQGGFGPVYKGTLVDGQ---EIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 101
+G G +G V + VDG+ ++A+K+L + SE K E+ L ++H N++ LL
Sbjct: 33 VGSGAYGAV--CSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 102 GCCIQGE------EKLLIYEFMTN---KSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
E + L+ FM K + ++R + L + +G+
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL--------VYQMLKGLR 142
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
Y+H IIHRDLK N+ +++D KI DFGLAR + + + T Y AP
Sbjct: 143 YIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAP 194
Query: 213 EYASDG-QFSVKSDVFSFGILLLEIISGK 240
E + +++ D++S G ++ E+I+GK
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 39 NNFSINKKLGQGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 91
N+F K LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
+H L L Q ++L + E+ L F R ++ +
Sbjct: 65 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 120
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YLH +++RD+K N++LD+D + KI+DFGL + G K GT Y+
Sbjct: 121 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKTFCGTPEYL 175
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHE 214
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 90
I+ ++ + + K +G G FG + D Q +AVK + + E+ +K E+I
Sbjct: 14 IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIAANVKREIINHR 70
Query: 91 KLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L+H N+V+ + ++ E+ + L I + R + RF G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 127
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTKRVIGTYG 208
V Y H +++ HRDLK N LLD P KI DFG +++ K +GT
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQPKSTVGTPA 181
Query: 209 YMAPEYASDGQFSVK-SDVFSFGILLLEIISG 239
Y+APE ++ K +DV+S G+ L ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 39 NNFSINKKLGQGGFGPVY----KGTLVDGQEIAVKRLSK---ISEQGLKELKNEVILFSK 91
N+F K LG+G FG V K T G+ A+K L K I++ + E +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
+H L L Q ++L + E+ L F R ++ +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
+ YLH +++RD+K N++LD+D + KI+DFGL + G K GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKTFCGTPEYL 172
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
APE D + D + G+++ E++ G+ FY+ D+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 211
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSKLQHR 95
+F + + +G+G + V L I ++ K ++ + ++ E +F + +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 96 NLVKLLGCCIQGEEKLL-IYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
+ L C Q E +L + E++ L +F +R + L + + YL
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
H+ II+RDLK NVLLD + + K++D+G+ + G T GT Y+APE
Sbjct: 123 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEI 177
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
+ D ++ G+L+ E+++G+ S +N
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELK 83
L E+ ++F I + LG+G FG VY + I A+K L S++ ++G++ +L+
Sbjct: 4 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 63
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----FDQERCKILDWS 138
E+ + S L+H N++++ + L+ EF L + FD++R
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--- 120
Query: 139 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 198
+ A + Y H+ ++IHRD+K N+L+ KI+DFG +
Sbjct: 121 -----MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSL 168
Query: 199 NTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+ + GT Y+ PE K D++ G+L E + G
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELK 83
L E+ ++F I + LG+G FG VY + I A+K L S++ ++G++ +L+
Sbjct: 3 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----FDQERCKILDWS 138
E+ + S L+H N++++ + L+ EF L + FD++R
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--- 119
Query: 139 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 198
+ A + Y H+ ++IHRD+K N+L+ KI+DFG +
Sbjct: 120 -----MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSL 167
Query: 199 NTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+ + GT Y+ PE K D++ G+L E + G
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 19/240 (7%)
Query: 26 LPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 85
LPL TI + + +G+G FG V++G G+E+AVK S E+ + E
Sbjct: 32 LPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAE 86
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
+ L+H N++ + + +++ +FD + +
Sbjct: 87 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 146
Query: 146 GTARGVMYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEG 198
TA G+ +LH + + I HRDLK+ N+L+ ++ I+D GLA D +
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206
Query: 199 NTKRVIGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
+GT YMAPE D + ++D+++ G++ E I+ + + G H D L
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 265
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 19/240 (7%)
Query: 26 LPLFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 85
LPL TI + + +G+G FG V++G G+E+AVK S E+ + E
Sbjct: 19 LPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAE 73
Query: 86 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
+ L+H N++ + + +++ +FD + +
Sbjct: 74 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 133
Query: 146 GTARGVMYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEG 198
TA G+ +LH + + I HRDLK+ N+L+ ++ I+D GLA D +
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 193
Query: 199 NTKRVIGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
+GT YMAPE D + ++D+++ G++ E I+ + + G H D L
Sbjct: 194 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 252
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKI----SEQGLKELKNEVILFSKLQHR 95
+F + + +G+G + V L I ++ K ++ + ++ E +F + +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 96 NLVKLLGCCIQGEEKLL-IYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
+ L C Q E +L + E++ L +F +R + L + + YL
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
H+ II+RDLK NVLLD + + K++D+G+ + G T GT Y+APE
Sbjct: 138 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEI 192
Query: 215 ASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNN 251
+ D ++ G+L+ E+++G+ S +N
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 229
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 41 FSINKKLGQGGFGPVYK-GTLVDGQEIAVK----RLSKISEQGL--KELKNEVILFSKLQ 93
+ I ++LG G F V K G E A K R S+ S +G+ +E++ EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E ++ L F+ +E L + I GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH +I H DLK N+ LLD+++ + K+ DFGLA E K + GT +
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEF 184
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 36 SATNNFSINKKLGQGGFGPVYKGTLVDGQEI--AVKRLSKISEQGLKELKNEV----ILF 89
+ ++F K +G+G FG V +E+ AVK L K + KE K+ + +L
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
++H LV L ++ + +++ L + +ERC L+ RF+ A
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL-FYHLQRERC-FLEPRARFYA-AEIAS 150
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
+ YLH L I++RDLK N+LLD + ++DFGL + E T GT Y
Sbjct: 151 ALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTTSTFCGTPEY 205
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + D + G +L E++ G
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 41 FSINKKLGQGGFGPVYK-GTLVDGQEIAVK----RLSKISEQGL--KELKNEVILFSKLQ 93
+ I ++LG G F V K G E A K R S+ S +G+ +E++ EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E ++ L F+ +E L + I GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH +I H DLK N+ LLD+++ + K+ DFGLA E K + GT +
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEF 184
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 41 FSINKKLGQGGFGPVYK-GTLVDGQEIAVK----RLSKISEQGL--KELKNEVILFSKLQ 93
+ I ++LG G F V K G E A K R S+ S +G+ +E++ EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E ++ L F+ +E L + I GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH +I H DLK N+ LLD+++ + K+ DFGLA E K + GT +
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEF 184
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 27/250 (10%)
Query: 14 TENDQIQNIDLELPLFELATIVSATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLS 72
TEN Q++ E L + A + +G+G V + G E AVK +
Sbjct: 69 TENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIME 128
Query: 73 ----KISEQGLKELKNEV-----ILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLD 123
++S + L+E++ IL H +++ L+ L+++ M L
Sbjct: 129 VTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL- 187
Query: 124 SFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS 183
F + E+ + + R I+ V +LH ++ I+HRDLK N+LLD +M ++S
Sbjct: 188 -FDYLTEKVALSEKETR-SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLS 242
Query: 184 DFGLARAFGGDETEGNTKRVIGTYGYMAPEY------ASDGQFSVKSDVFSFGILLLEII 237
DFG + E + + GT GY+APE + + + D+++ G++L ++
Sbjct: 243 DFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 238 SGKKNRGFYH 247
+G F+H
Sbjct: 300 AGSP--PFWH 307
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 30/212 (14%)
Query: 46 KLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 98
K+GQG FG V+K GQ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 79
Query: 99 KLLGCCIQGEEKL--------LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L+ C L+++F + L + + L KR ++ G
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 136
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG---GDETEGNTKRVIGTY 207
+ Y+H++ +I+HRD+KA+NVL+ +D K++DFGLARAF + RV+ T
Sbjct: 137 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 192
Query: 208 GYMAPE-YASDGQFSVKSDVFSFGILLLEIIS 238
Y PE + + D++ G ++ E+ +
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 30/210 (14%)
Query: 46 KLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 98
K+GQG FG V+K GQ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 99 KLLGCCIQGEEKL--------LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L+ C L+++F + L + + L KR ++ G
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 137
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG---GDETEGNTKRVIGTY 207
+ Y+H++ +I+HRD+KA+NVL+ +D K++DFGLARAF + RV+ T
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 208 GYMAPE-YASDGQFSVKSDVFSFGILLLEI 236
Y PE + + D++ G ++ E+
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 90
I+ ++ + + K +G G FG + D Q +AVK + + E+ + +K E+I
Sbjct: 13 IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHR 69
Query: 91 KLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L+H N+V+ + ++ E+ + L I + R + RF G
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 126
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTKRVIGTYG 208
V Y H +++ HRDLK N LLD P KI DFG +++ K +GT
Sbjct: 127 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQPKSTVGTPA 180
Query: 209 YMAPEYASDGQFSVK-SDVFSFGILLLEIISG 239
Y+APE ++ K +DV+S G+ L ++ G
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 30/212 (14%)
Query: 46 KLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 98
K+GQG FG V+K GQ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 99 KLLGCCIQGEEKL--------LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L+ C L+++F + L + + L KR ++ G
Sbjct: 81 NLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 137
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG---GDETEGNTKRVIGTY 207
+ Y+H++ +I+HRD+KA+NVL+ +D K++DFGLARAF + RV+ T
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 208 GYMAPE-YASDGQFSVKSDVFSFGILLLEIIS 238
Y PE + + D++ G ++ E+ +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 41 FSINKKLGQGGFGPVYK-GTLVDGQEIAVK----RLSKISEQGL--KELKNEVILFSKLQ 93
+ I ++LG G F V K G E A K R S+ S +G+ +E++ EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E ++ L F+ +E L + I GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH +I H DLK N+ LLD+++ + K+ DFGLA E K + GT +
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEF 184
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 45 KKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL--- 100
K LG GG G V+ D + +A+K++ Q +K E+ + +L H N+VK+
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 101 -----------LGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+G + ++ E+M + E+ +L+ R + R
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL----EQGPLLEEHARL-FMYQLLR 131
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGDET-EGNTKRVIGTY 207
G+ Y+H + ++HRDLK +N+ ++ +D+ KI DFGLAR + +G+ + T
Sbjct: 132 GLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 208 GYMAPE-YASDGQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNLNLI 255
Y +P S ++ D+++ G + E+++GK H + LI
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 30/212 (14%)
Query: 46 KLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 98
K+GQG FG V+K GQ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 99 KLLGCCIQGEEKL--------LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L+ C L+++F + L + + L KR ++ G
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 137
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG---GDETEGNTKRVIGTY 207
+ Y+H++ +I+HRD+KA+NVL+ +D K++DFGLARAF + RV+ T
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 208 GYMAPE-YASDGQFSVKSDVFSFGILLLEIIS 238
Y PE + + D++ G ++ E+ +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 41 FSINKKLGQGGFGPVYK-GTLVDGQEIAVK----RLSKISEQGL--KELKNEVILFSKLQ 93
+ I ++LG G F V K G E A K R S+ S +G+ +E++ EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E ++ L F+ +E L + I GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH +I H DLK N+ LLD+++ + K+ DFGLA E K + GT +
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEF 184
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 46 KLGQGGFGPVYKG----TLVDGQ--EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 99
++G+G F VYKG T V+ E+ ++L+K Q KE E LQH N+V+
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVR 89
Query: 100 LLGC---CIQGEEKL-LIYEFMTNKSLDSFI--FDQERCKIL-DWSKRFHIICGTARGVM 152
++G++ + L+ E T+ +L +++ F + K+L W ++ +G+
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQ 143
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+LH + IIHRDLK N+ + KI D GLA + K VIGT + A
Sbjct: 144 FLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXA 198
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISGK 240
PE + ++ DV++FG LE + +
Sbjct: 199 PEXYEE-KYDESVDVYAFGXCXLEXATSE 226
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 28 LFELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRL--SKISEQGLK-ELK 83
L E+ ++F I + LG+G FG VY + I A+K L S++ ++G++ +L+
Sbjct: 3 LAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 84 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI-----FDQERCKILDWS 138
E+ + S L+H N++++ + L+ EF L + FD++R
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--- 119
Query: 139 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 198
+ A + Y H+ ++IHRD+K N+L+ KI+DFG +
Sbjct: 120 -----MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSL 167
Query: 199 NTKRVIGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+ + GT Y+ PE K D++ G+L E + G
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 39/244 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQ--GLKELKNEVILFSKLQHR 95
+ + I +G G +G V + ++ + +A+K++ ++ E K + E+ + ++L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 96 NLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHI---ICGTARGVM 152
++VK+L I + + ++ + DS R + + HI + GV
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVK 170
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIG------- 205
Y+H I+HRDLK +N L++QD + K+ DFGLAR E GN++ I
Sbjct: 171 YVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN-GNSQLPISPREDDMN 226
Query: 206 -------------------TYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIISGKKNRGF 245
T Y APE ++ DV+S G + E+++ K
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286
Query: 246 YHSD 249
YH+D
Sbjct: 287 YHAD 290
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 90/218 (41%), Gaps = 33/218 (15%)
Query: 43 INKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKNEVILFSKLQ-HRNLVKL 100
+ + L +GGF VY+ V G+E A+KRL E+ + + EV KL H N+V+
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 101 LGCCIQGEEK-------LLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
G+E+ L+ + L F+ E L I T R V +
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA---------------RAFGGDETEG 198
+H+ + IIHRDLK N+LL K+ DFG A RA +E
Sbjct: 152 MHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 199 NTKRVIGTYGYMAPE---YASDGQFSVKSDVFSFGILL 233
NT T Y PE S+ K D+++ G +L
Sbjct: 211 NT-----TPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEI-AVKR--LSKISEQGLKELKNEVILFSKLQHRNLVKLL 101
+K+G+G +G V+K + EI A+KR L E E+ L +L+H+N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 102 GCCIQGEEKLLIYEFMT---NKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
++ L++EF K DS D LD + +G+ + H +
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGD------LDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 159 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDG 218
++HRDLK N+L++++ K+++FGLARAFG + V+ T Y P+
Sbjct: 122 ---VLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGA 176
Query: 219 Q-FSVKSDVFSFGILLLEIISG 239
+ +S D++S G + E+ +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANA 198
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 41 FSINKKLGQGGFGPVYK-GTLVDGQEIAVK----RLSKISEQGL--KELKNEVILFSKLQ 93
+ I ++LG G F V K G E A K R S+ S +G+ +E++ EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L + +LI E ++ L F+ +E L + I GV Y
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 154 LHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH +I H DLK N+ LLD+++ + K+ DFGLA E K + GT +
Sbjct: 131 LHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEF 184
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + +++D++S G++ ++SG
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 63 GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSL 122
G + + + ++ E LKE+ IL H N+++L L+++ M L
Sbjct: 55 GGSFSAEEVQELREATLKEVD---ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 123 DSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKI 182
F + E+ + + R I+ + LH +L I+HRDLK N+LLD DMN K+
Sbjct: 112 --FDYLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKL 165
Query: 183 SDFGLARAFGGDETEGNTKRVIGTYGYMAPEY----ASDGQ--FSVKSDVFSFGILLLEI 236
+DFG + E + V GT Y+APE +D + + D++S G+++ +
Sbjct: 166 TDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
Query: 237 ISGKKNRGFYHSDNNLNL 254
++G + F+H L L
Sbjct: 223 LAG--SPPFWHRKQMLML 238
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 63 GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSL 122
G + + + ++ E LKE+ IL H N+++L L+++ M L
Sbjct: 42 GGSFSAEEVQELREATLKEVD---ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 98
Query: 123 DSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKI 182
F + E+ + + R I+ + LH +L I+HRDLK N+LLD DMN K+
Sbjct: 99 --FDYLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKL 152
Query: 183 SDFGLARAFGGDETEGNTKRVIGTYGYMAPEY----ASDGQ--FSVKSDVFSFGILLLEI 236
+DFG + E + V GT Y+APE +D + + D++S G+++ +
Sbjct: 153 TDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 209
Query: 237 ISGKKNRGFYHSDNNLNL 254
++G + F+H L L
Sbjct: 210 LAG--SPPFWHRKQMLML 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 63 GQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSL 122
G + + + ++ E LKE+ IL H N+++L L+++ M L
Sbjct: 55 GGSFSAEEVQELREATLKEVD---ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 123 DSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKI 182
F + E+ + + R I+ + LH +L I+HRDLK N+LLD DMN K+
Sbjct: 112 --FDYLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKL 165
Query: 183 SDFGLARAFGGDETEGNTKRVIGTYGYMAPEY----ASDGQ--FSVKSDVFSFGILLLEI 236
+DFG + E + V GT Y+APE +D + + D++S G+++ +
Sbjct: 166 TDFGFSCQLDPGE---KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
Query: 237 ISGKKNRGFYHSDNNLNL 254
++G + F+H L L
Sbjct: 223 LAG--SPPFWHRKQMLML 238
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 20/202 (9%)
Query: 46 KLGQGGFGPVYKGTLV-DGQEIAVKRL-SKISEQGLKELKNEV-ILFSKLQHRNLVKLLG 102
+LG+G +G V K V GQ +AVKR+ + ++ Q K L ++ I + V G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 103 CCIQGEEKLLIYEFMTNKSLDSF---IFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 159
+ + + E M + SLD F + D+ + D + I + + +LH S+
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEHLH--SK 172
Query: 160 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEYA--- 215
L +IHRD+K SNVL++ K+ DFG++ G + K + G YMAPE
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGIS----GYLVDSVAKTIDAGCKPYMAPERINPE 228
Query: 216 -SDGQFSVKSDVFSFGILLLEI 236
+ +SVKSD++S GI ++E+
Sbjct: 229 LNQKGYSVKSDIWSLGITMIEL 250
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 46 KLGQGGFGPVYKGTLV-DGQEIAVKRL-SKISEQGLKELKNEV-ILFSKLQHRNLVKLLG 102
+LG+G +G V K V GQ +AVKR+ + ++ Q K L ++ I + V G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 103 CCIQGEEKLLIYEFMTNKSLDSF---IFDQERCKILDWSKRFHIICGTARGVMYLHQDSR 159
+ + + E M + SLD F + D+ + D + I + + +LH S+
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEHLH--SK 128
Query: 160 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA---- 215
L +IHRD+K SNVL++ K+ DFG++ D + G YMAPE
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERINPEL 185
Query: 216 SDGQFSVKSDVFSFGILLLEI 236
+ +SVKSD++S GI ++E+
Sbjct: 186 NQKGYSVKSDIWSLGITMIEL 206
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 36 SATNNFSINKKLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQH 94
S + + I ++LG G FG V++ G+ K ++ +KNE+ + ++L H
Sbjct: 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH 107
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI----FDQERCKILDWSKRFHIICGTARG 150
L+ L E +LI EF++ L I + +++++ ++ G
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ------ACEG 161
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLD--QDMNPKISDFGLARAFGGDETEGNTKRVIGTYG 208
+ ++H+ S I+H D+K N++ + + + KI DFGLA DE K T
Sbjct: 162 LKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAE 215
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+ APE +D+++ G+L ++SG
Sbjct: 216 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
+ + +G+G FG V++G G+E+AVK S E+ + E+ L+H N++ +
Sbjct: 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 64
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD----- 157
+ +++ +FD + + TA G+ +LH +
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTKRVIGTYGYMAPEYA 215
+ I HRDLK+ N+L+ ++ I+D GLA D + +GT YMAPE
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 216 SDG------QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
D + ++D+++ G++ E I+ + + G H D L
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 226
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
+ + +G+G FG V++G G+E+AVK S E+ + E+ L+H N++ +
Sbjct: 10 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 67
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD----- 157
+ +++ +FD + + TA G+ +LH +
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTKRVIGTYGYMAPEYA 215
+ I HRDLK+ N+L+ ++ I+D GLA D + +GT YMAPE
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 216 SDG------QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
D + ++D+++ G++ E I+ + + G H D L
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 229
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
+ + +G+G FG V++G G+E+AVK S E+ + E+ L+H N++ +
Sbjct: 8 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 65
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD----- 157
+ +++ +FD + + TA G+ +LH +
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTKRVIGTYGYMAPEYA 215
+ I HRDLK+ N+L+ ++ I+D GLA D + +GT YMAPE
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 216 SDG------QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
D + ++D+++ G++ E I+ + + G H D L
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 227
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 43 INKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 102
+ + +G+G FG V++G G+E+AVK S E+ + E+ L+H N++ +
Sbjct: 13 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 70
Query: 103 CCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQD----- 157
+ +++ +FD + + TA G+ +LH +
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 158 SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTKRVIGTYGYMAPEYA 215
+ I HRDLK+ N+L+ ++ I+D GLA D + +GT YMAPE
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 216 SDG------QFSVKSDVFSFGILLLEIISGKKNRGFYHSDNNL 252
D + ++D+++ G++ E I+ + + G H D L
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQL 232
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 38 TNNFSINKKLGQGGFGP----VYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ 93
T+ + + + +G G + ++K T E AVK + K +E++ IL Q
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKAT---NXEFAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 94 HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
H N++ L G+ ++ E L I Q K + ++ + V Y
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ---KFFSEREASAVLFTITKTVEY 131
Query: 154 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAFGGDETEGNTKRVIGTYGY 209
LH ++HRDLK SN+L +D+ NP +I DFG A+ + G T +
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLXTPCYTANF 186
Query: 210 MAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+APE + D++S G+LL ++G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 24/214 (11%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRLSKI-----SEQGLKELKNEVILFSK 91
++ + K +G+G FG V Q++ A+K LSK S+ + +++ F+
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA- 132
Query: 92 LQHRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
+ V L C Q ++ L ++ E+M L + + + + + W+K + TA
Sbjct: 133 --NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE--KWAKFY-----TAEV 183
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-NTKRVIGTYGY 209
V+ L + +IHRD+K N+LLD+ + K++DFG DET + +GT Y
Sbjct: 184 VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGTPDY 241
Query: 210 MAPEY----ASDGQFSVKSDVFSFGILLLEIISG 239
++PE DG + + D +S G+ L E++ G
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 34/246 (13%)
Query: 31 LATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQG-----------L 79
+A + + + +++ + + G +G V G +G +A+KR+ G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 80 KELKNEVILFSKLQHRNLVKLLGCCIQGEE----KLLIYEFMTNKSLDSFIFDQERCKIL 135
K + E+ L + H N++ L + EE KL + + L I DQ
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 136 DWSKRF--HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
+ F HI+ G LH ++HRDL N+LL + + I DF LAR
Sbjct: 134 QHIQYFMYHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE--- 183
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGK---KNRGFYHSD 249
D + N + Y APE + F+ D++S G ++ E+ + K + FY
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY--- 240
Query: 250 NNLNLI 255
N LN I
Sbjct: 241 NQLNKI 246
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 34/246 (13%)
Query: 31 LATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQG-----------L 79
+A + + + +++ + + G +G V G +G +A+KR+ G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 80 KELKNEVILFSKLQHRNLVKLLGCCIQGEE----KLLIYEFMTNKSLDSFIFDQERCKIL 135
K + E+ L + H N++ L + EE KL + + L I DQ
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 136 DWSKRF--HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
+ F HI+ G LH ++HRDL N+LL + + I DF LAR
Sbjct: 134 QHIQYFMYHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE--- 183
Query: 194 DETEGNTKRVIGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIISGK---KNRGFYHSD 249
D + N + Y APE + F+ D++S G ++ E+ + K + FY
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY--- 240
Query: 250 NNLNLI 255
N LN I
Sbjct: 241 NQLNKI 246
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 27/232 (11%)
Query: 29 FELATIVSATNNFSINKKLGQGGFGPV-YKGTLVDGQEIAVKRLSKISEQGLKELKNEVI 87
F+ ++ ++ +KLG+GGF V L DG A+KR+ +Q +E + E
Sbjct: 19 FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREAD 78
Query: 88 LFSKLQHRNLVKLLGCCIQ----GEEKLLIYEFMTNKSLDSFIFDQERCK----ILDWSK 139
+ H N+++L+ C++ E L+ F +L + I ER K L +
Sbjct: 79 MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI---ERLKDKGNFLTEDQ 135
Query: 140 RFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 199
++ G RG+ +H HRDLK +N+LL + P + D G + EG+
Sbjct: 136 ILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLG-SMNQACIHVEGS 191
Query: 200 TKRVI--------GTYGYMAPEYASDGQFSV---KSDVFSFGILLLEIISGK 240
+ + T Y APE S V ++DV+S G +L ++ G+
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 90
I+ ++ + + K +G G FG + D Q +AVK + + E+ + +K E+I
Sbjct: 14 IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHR 70
Query: 91 KLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L+H N+V+ + ++ E+ + L I + R + RF G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 127
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTKRVIGTYG 208
V Y H +++ HRDLK N LLD P KI FG +++ K +GT
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS---SVLHSQPKSTVGTPA 181
Query: 209 YMAPEYASDGQFSVK-SDVFSFGILLLEIISG 239
Y+APE ++ K +DV+S G+ L ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LKE++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E+ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+++DQ K++DFGLA+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTL-VDGQEIAVKRLSKI------SEQGLKELKNEVILFSK 91
+ + I + +G G +G V + GQ++A+K++ +++ L+ELK +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKH 110
Query: 92 LQHRNLVK----LLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGT 147
+H N++ L GE K + +S I + L+ + F +
Sbjct: 111 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF--LYQL 168
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN--TKRVIG 205
RG+ Y+H ++IHRDLK SN+L++++ KI DFG+AR E +
Sbjct: 169 LRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 206 TYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIISGKK 241
T Y APE S +++ D++S G + E+++ ++
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 34 IVSATNNFSINKKLGQGGFGPVYKGTLVDGQE---IAVKRLSKISEQGLKELKNEVILFS 90
I+ ++ + + K +G G FG + D Q +AVK + + E+ + +K E+I
Sbjct: 14 IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHR 70
Query: 91 KLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARG 150
L+H N+V+ + ++ E+ + L I + R + RF G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS--EDEARF-FFQQLISG 127
Query: 151 VMYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTKRVIGTYG 208
V Y H +++ HRDLK N LLD P KI FG +++ K +GT
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS---SVLHSQPKDTVGTPA 181
Query: 209 YMAPEYASDGQFSVK-SDVFSFGILLLEIISG 239
Y+APE ++ K +DV+S G+ L ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTL-VDGQEIAVKRLSKI------SEQGLKELKNEVILFSK 91
+ + I + +G G +G V + GQ++A+K++ +++ L+ELK +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKH 109
Query: 92 LQHRNLVK----LLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGT 147
+H N++ L GE K + +S I + L+ + F +
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF--LYQL 167
Query: 148 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN--TKRVIG 205
RG+ Y+H ++IHRDLK SN+L++++ KI DFG+AR E +
Sbjct: 168 LRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 206 TYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIISGKK 241
T Y APE S +++ D++S G + E+++ ++
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 24/232 (10%)
Query: 39 NNFSI--NKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKI--SEQGLKELKNEVILFSKLQ 93
NNF I +K+LG+G F V + + GQE A K L K + E+ +E+ + +
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86
Query: 94 H-RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
++ L E +LI E+ + S E +++ + +I GV
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLP-ELAEMVSENDVIRLIKQILEGVY 145
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNP----KISDFGLARAFGGDETEGNTKRVIGTYG 208
YLHQ++ I+H DLK N+LL + P KI DFG++R G + ++GT
Sbjct: 146 YLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSRKIGH---ACELREIMGTPE 198
Query: 209 YMAPEYASDGQFSVKSDVFSFGILLLEIIS------GKKNRGFYHSDNNLNL 254
Y+APE + + +D+++ GI+ +++ G+ N+ Y + + +N+
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV 250
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K +G G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E+M + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ K++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K +G G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E+M + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ K++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEI--AVKRLSKISEQGLKELKNEVILFSKLQHRNLV 98
+++ +G+G +G V K + G I A K++ K + + K E+ + L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 99 KLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDS 158
+L + L+ E T L + + ++ S I+ V Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCH--- 123
Query: 159 RLRIIHRDLKASNVLL--DQDMNP-KISDFGLARAFGGDETEGNTKRV-IGTYGYMAPEY 214
+L + HRDLK N L D +P K+ DFGLA F G R +GT Y++P+
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF----KPGKMMRTKVGTPYYVSPQ- 178
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
+G + + D +S G+++ ++ G
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 41 FSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSK---ISEQGL--KELKNEVILFSKLQH 94
+ + + +G+G F V + + GQ+ AVK + S GL ++LK E + L+H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCK-ILDWSKRFHIICGTARGVMY 153
++V+LL +++EFM L I + + + H + + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNP---KISDFGLARAFGGDETEGNTKRVIGTYGYM 210
H ++ IIHRD+K NVLL N K+ DFG+A G + +GT +M
Sbjct: 146 CHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFM 200
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE + DV+ G++L ++SG
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 29 FELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEI--AVKRLSKISEQGLKELKNEV 86
F+ +T +++ +G+G +G V K + G I A K++ K + + K E+
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 87 ILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICG 146
+ L H N+++L + L+ E T L + + ++ S I+
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK---RVFRESDAARIMKD 131
Query: 147 TARGVMYLHQDSRLRIIHRDLKASNVLL--DQDMNP-KISDFGLARAFGGDETEGNTKRV 203
V Y H +L + HRDLK N L D +P K+ DFGLA F G R
Sbjct: 132 VLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF----KPGKMMRT 184
Query: 204 -IGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIISG 239
+GT Y++P+ +G + + D +S G+++ ++ G
Sbjct: 185 KVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 47 LGQGGFGPVYKGTLVDGQEIAVKRLSKIS-------EQGLKELKNEVILFSKLQHRNLVK 99
LG+G +G V + ++D + + + + + G +K E+ L +L+H+N+++
Sbjct: 13 LGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 100 LLGCCIQGEEKLLIYEFM------TNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMY 153
L+ + EEK +Y M + LDS ++R + F C G+ Y
Sbjct: 71 LVDV-LYNEEKQKMYMVMEYCVCGMQEMLDSV--PEKRFPVCQAHGYF---CQLIDGLEY 124
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPE 213
LH I+H+D+K N+LL KIS G+A A + + G+ + PE
Sbjct: 125 LHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 214 YAS--DGQFSVKSDVFSFGILLLEIISG 239
A+ D K D++S G+ L I +G
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 98 VKLLGCCI-QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K ++Y + + ++ R +S+ +
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 131
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 186
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ QG K KN E+ + KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNI 75
Query: 98 VKLLGCCI-QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + + ++ R +S+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVAR----HYSRAKQTLPVIYVKLYMYQL 131
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 186
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LKE++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E+ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+++DQ +++DFGLA+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 115/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E M D F F ER + + R
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQ-DLFDFITERGALQEELAR-SFFWQVLE 125
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 126 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 178
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 213
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 214 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGTLVDG-QEIAVKRLSKISEQGL--KELKNEVILFSK 91
V +N+ I +G+G +G VY + + +A+K+++++ E + K + E+ + ++
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYE--FMTNKSLDSFIFDQERCKILDWSKRFH-IICGTA 148
L+ +++L I E LL ++ ++ + DS + + I + I+
Sbjct: 84 LKSDYIIRLHDLII--PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLL 141
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 195
G ++H+ IIHRDLK +N LL+QD + KI DFGLAR D+
Sbjct: 142 LGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 121
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 122 AVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 174
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 209
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 210 FEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFY----AAQIV 144
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 199
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFS 221
II+RDLK NV+LD + + KI+DFG+ + D TK GT Y+APE + +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTPDYIAPEIIAYQPYG 520
Query: 222 VKSDVFSFGILLLEIISGK 240
D ++FG+LL E+++G+
Sbjct: 521 KSVDWWAFGVLLYEMLAGQ 539
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ QG K KN E+ + KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNI 75
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 131
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 186
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ QG K KN E+ + KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNI 75
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 131
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 186
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 41 FSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 100
+ I + LG+G FG V++ ++ + + K+ +K E+ + + +HRN++ L
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHL 66
Query: 101 LGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKR-----FHIICGTARGVMYLH 155
EE ++I+EF++ LD IF++ + ++R H +C + +LH
Sbjct: 67 HESFESMEELVMIFEFISG--LD--IFERINTSAFELNEREIVSYVHQVC---EALQFLH 119
Query: 156 QDSRLRIIHRDLKASNVLLD--QDMNPKISDFGLARAFG-GDETEGNTKRVIGTYGYMAP 212
+ I H D++ N++ + KI +FG AR GD N + + Y AP
Sbjct: 120 SHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAP 172
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISG 239
E S +D++S G L+ ++SG
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E+ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+++DQ K++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 155
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 34 IVSATNNFSINKKLGQGGFG--PVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILFSK 91
I+ ++ + K +G G FG + + L + +AVK + + + + ++ E+I
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLT-KELVAVKYIERGAAID-ENVQREIINHRS 72
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
L+H N+V+ + +I E+ + L I + R + F + GV
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS---GV 129
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTKRVIGTYGY 209
Y H ++I HRDLK N LLD P KI DFG +++ K +GT Y
Sbjct: 130 SYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQPKSTVGTPAY 183
Query: 210 MAPEYASDGQFSVK-SDVFSFGILLLEIISG 239
+APE ++ K +DV+S G+ L ++ G
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYASDGQFS 221
II+RDLK NV+LD + + KI+DFG+ + D TK GT Y+APE + +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTPDYIAPEIIAYQPYG 199
Query: 222 VKSDVFSFGILLLEIISGK 240
D ++FG+LL E+++G+
Sbjct: 200 KSVDWWAFGVLLYEMLAGQ 218
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K +G G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ K++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 144
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 199
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 172
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 227
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 140
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 141 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEI 195
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 36 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 146
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 201
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 172
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 227
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 162 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY-----AS 216
+IHRD+K SN+LLD+ K+ DFG++ D+ + R G YMAPE +
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPT 202
Query: 217 DGQFSVKSDVFSFGILLLEIISGK 240
+ +++DV+S GI L+E+ +G+
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQ 226
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E+ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+++DQ K++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPV----YKGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V +K T G A+K L K LK+++ NE +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E+ + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+++DQ K++DFG A+ +G T + GT Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 155
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 94
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 150
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 151 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 205
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 206 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 40 NFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKN------EVILFSKL 92
+ + LG+GGFG V+ G L D ++A+K + + G L + EV L K+
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 93 Q----HRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA 148
H +++LL E +L+ E + D F + E+ + + R C
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLGEGPSR----CFFG 146
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
+ V + ++HRD+K N+L+D + K+ DFG + A DE + GT
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFD---GTR 202
Query: 208 GYMAPEYASDGQF-SVKSDVFSFGILLLEIISG 239
Y PE+ S Q+ ++ + V+S GILL +++ G
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 131
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 186
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 143
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 144 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 198
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 199 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 232
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E++ + S + + + + RF+ A+ V+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 155
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEI 210
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 143
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 144 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 198
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 199 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 83
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 139
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 140 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 194
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 195 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 228
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 131
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 186
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 165
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 166 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 220
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 221 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 254
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 79
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 135
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 136 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 190
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 191 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 76
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 132
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 133 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSR 187
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 188 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 46 KLGQGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLL 101
+LG+G FG V++ + D Q + AVK++ L+ + E++ + L +V L
Sbjct: 81 RLGRGSFGEVHR--MEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
G +G + E + SL + +Q L + + + G+ YLH SR R
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQ---GCLPEDRALYYLGQALEGLEYLH--SR-R 186
Query: 162 IIHRDLKASNVLLDQD-MNPKISDFGLA-----RAFGGDETEGNTKRVIGTYGYMAPEYA 215
I+H D+KA NVLL D + + DFG A G D G+ + GT +MAPE
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY--IPGTETHMAPEVV 244
Query: 216 SDGQFSVKSDVFSFGILLLEIISG 239
K DV+S ++L +++G
Sbjct: 245 LGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 124
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 125 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 177
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 212
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 213 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 80
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 136
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 137 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 191
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 192 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 225
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 121
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 122 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 174
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 209
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 210 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 131
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 186
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 165
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 166 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 220
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 221 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 254
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 88
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 144
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 145 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 199
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 200 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 42 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 152
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 125
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 126 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 178
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 213
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 214 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 103
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 159
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 160 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 214
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 215 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 248
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 111
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 167
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 168 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 222
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 223 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 256
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 113
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 169
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 170 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 224
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 225 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 258
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 172
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLA 227
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 126
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 127 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 179
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 214
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 215 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 126
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 127 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 179
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 214
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 215 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNL 97
+++ K +G G FG VY+ L D G+ +A+K++ + K KN E+ + KL H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 154
Query: 98 VKLLGCCIQ-GEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA-------- 148
V+L GE+K +Y + + ++ R +S+ +
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR----HYSRAKQTLPVIYVKLYMYQL 210
Query: 149 -RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGT 206
R + Y+H I HRD+K N+LLD D K+ DFG A+ E N +
Sbjct: 211 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSR 265
Query: 207 YGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISGK 240
Y Y APE A+D S+ DV+S G +L E++ G+
Sbjct: 266 Y-YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQ 299
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 148
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 149 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 201
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 236
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 237 FEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
L KL ++ E+ + S + + + + RF+ A+ V+
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFY----AAQIVLTF 155
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+++DQ K++DFG A+ +G T + GT Y+APE
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 126
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 127 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 179
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 214
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 215 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 153
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 154 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 206
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 241
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 242 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 140
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 141 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 193
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 228
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 229 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 43/281 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 154
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 155 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 207
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G + F H + +IG
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDE---EIIGG---------- 252
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
Q F C H+ C+ P DRP+ +
Sbjct: 253 --------QVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 140
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 141 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 193
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 228
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 229 FEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 43/281 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 154
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 155 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 207
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G + F H + +IG
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDE---EIIGG---------- 252
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
Q F C H+ C+ P DRP+ +
Sbjct: 253 --------QVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 43/281 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 153
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 154 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 206
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G + F H + +IG
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDE---EIIGG---------- 251
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
Q F C H+ C+ P DRP+ +
Sbjct: 252 --------QVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 168
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 169 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 221
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 256
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 257 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 141
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 142 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 194
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 229
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 230 FEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 168
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 169 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 221
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 256
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 257 FEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 141
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 142 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 194
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 229
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 230 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 89
+ + ++K LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
KL H ++K+ E+ ++ E M L + +R K F+ +
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 131
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVI-G 205
V YLH++ IIHRDLK NVLL ++D KI+DFG ++ G E + R + G
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLCG 184
Query: 206 TYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISG 239
T Y+APE ++ D +S G++L +SG
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 173
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 174 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 226
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 261
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 262 FEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 89
+ + ++K LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
KL H ++K+ E+ ++ E M L + +R K F+ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 125
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVI-G 205
V YLH++ IIHRDLK NVLL ++D KI+DFG ++ G E + R + G
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLCG 178
Query: 206 TYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISG 239
T Y+APE ++ D +S G++L +SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 89
+ + ++K LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
KL H ++K+ E+ ++ E M L + +R K F+ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 125
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVI-G 205
V YLH++ IIHRDLK NVLL ++D KI+DFG ++ G E + R + G
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLCG 178
Query: 206 TYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISG 239
T Y+APE ++ D +S G++L +SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 89
+ + ++K LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
KL H ++K+ E+ ++ E M L + +R K F+ +
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 124
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVI-G 205
V YLH++ IIHRDLK NVLL ++D KI+DFG ++ G E + R + G
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLCG 177
Query: 206 TYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISG 239
T Y+APE ++ D +S G++L +SG
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 160
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 161 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 213
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 248
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 249 FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 141
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 142 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 194
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G +P
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-------------------------IP 229
Query: 268 SQLIDPCIQGSFNLAEVI--RCIHIGLLCVQQHPKDRPSMPSV 308
+ + I+G + + C H+ C+ P DRP+ +
Sbjct: 230 FEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 19/219 (8%)
Query: 30 ELATIVSATNNFSINKKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNEVILF 89
E + ++ +F LG G G + + D +++AVKR I + EV L
Sbjct: 15 ETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKR---ILPECFSFADREVQLL 71
Query: 90 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTA 148
+ +H N+++ C + + I + +L ++ ++ + + ++ T
Sbjct: 72 RESDEHPNVIRYF-CTEKDRQFQYIAIELCAATLQEYVEQKDFAHL--GLEPITLLQQTT 128
Query: 149 RGVMYLHQDSRLRIIHRDLKASNVLLDQ-----DMNPKISDFGLARAFG-GDETEGNTKR 202
G+ +LH L I+HRDLK N+L+ + ISDFGL + G +
Sbjct: 129 SGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 203 VIGTYGYMAPEYASDG---QFSVKSDVFSFGILLLEIIS 238
V GT G++APE S+ + D+FS G + +IS
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 39 NNFSINKKLGQGGFGPVYKG-TLVDGQEIAVKRLSK--ISEQGLKE------LKNEVILF 89
+ + ++K LG G G V +++A+K +SK + +E ++ E+ +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 90 SKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
KL H ++K+ E+ ++ E M L + +R K F+ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---L 125
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTKRVI-G 205
V YLH++ IIHRDLK NVLL ++D KI+DFG ++ G E + R + G
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLCG 178
Query: 206 TYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISG 239
T Y+APE ++ D +S G++L +SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 43/281 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 121
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 122 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 174
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G + F H + +IG
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDE---EIIGG---------- 219
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
Q F C H+ C+ P DRP+ +
Sbjct: 220 --------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
L KL ++ E+ + S + + + + RF+ A+ V+
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 155
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+++DQ K++DFG A+ +G T + GT Y+APE
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 39 NNFSINKKLGQGGFGPVYK-GTLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 97
+F +LG G +G V+K + DG+ AVKR S + K+ +++
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR----SMSPFRGPKDRARKLAEVGSHEK 112
Query: 98 VKLLGCCIQGEEK------LLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR-- 149
V CC++ E+ L + + SL Q+ C+ S + G R
Sbjct: 113 VGQHPCCVRLEQAWEEGGILYLQTELCGPSL------QQHCEAWGASLPEAQVWGYLRDT 166
Query: 150 --GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTY 207
+ +LH ++H D+K +N+ L K+ DFGL G T G + G
Sbjct: 167 LLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG---TAGAGEVQEGDP 220
Query: 208 GYMAPEYASDGQFSVKSDVFSFGILLLEI 236
YMAPE G + +DVFS G+ +LE+
Sbjct: 221 RYMAPELL-QGSYGTAADVFSLGLTILEV 248
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
LVKL ++ E+ + S + + + + RF+ A+ V+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 154
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+++DQ +++DFG A+ +G T + GT Y+APE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ-HRNLVKLLGCC 104
LG+G V L+ QE AVK + K + EV + + Q HRN+++L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + L++E M S+ S I + L+ S ++ A + +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IAH 134
Query: 165 RDLKASNVLLDQ--DMNP-KISDFGLARA--FGGDETEGNTKRVI---GTYGYMAPE--- 213
RDLK N+L + ++P KI DFGL GD + +T ++ G+ YMAPE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 214 -YASDGQ-FSVKSDVFSFGILLLEIISG 239
++ + + + D++S G++L ++SG
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+++DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 43/281 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 154
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 155 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 207
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G + F H + +IG
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDE---EIIGG---------- 252
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
Q F C H+ C+ P DRP+ +
Sbjct: 253 --------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 43/281 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 153
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 154 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 206
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G + F H + +IG
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDE---EIIGG---------- 251
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
Q F C H+ C+ P DRP+ +
Sbjct: 252 --------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 43/281 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 153
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 154 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 206
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G + F H + +IG
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDE---EIIGG---------- 251
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
Q F C H+ C+ P DRP+ +
Sbjct: 252 --------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 39 NNFSINKKLGQGGFGPVY-KGTLVDGQEIAVKRLSKISEQGLKELK---NEVILFSKLQH 94
+ F K LG G FG V + G A+K L K LK+++ NE + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYL 154
L KL ++ E+ + S + + + + RF+ A+ V+
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFY----AAQIVLTF 155
Query: 155 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAPEY 214
L +I+RDLK N+++DQ K++DFG A+ +G T + GT Y+APE
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
++ D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 43/281 (15%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV-DGQEIAVKRLSKISEQGLKELKN------EVILFSK 91
+ + + LG GGFG VY G V D +A+K + K EL N EV+L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 92 LQH--RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTAR 149
+ +++LL + + +LI E D F F ER + + R
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLE 154
Query: 150 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYG 208
V + H ++HRD+K N+L+D + K+ DFG + A D + GT
Sbjct: 155 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRV 207
Query: 209 YMAPEYASDGQFSVKS-DVFSFGILLLEIISGKKNRGFYHSDNNLNLIGHAWKLWNEGMP 267
Y PE+ ++ +S V+S GILL +++ G + F H + +IG
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDE---EIIGG---------- 252
Query: 268 SQLIDPCIQGSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 308
Q F C H+ C+ P DRP+ +
Sbjct: 253 --------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 153 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMAP 212
YLH L +I+RDLK N+L+DQ K++DFG A+ +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 213 EYASDGQFSVKSDVFSFGILLLEIISG 239
E ++ D ++ G+L+ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 46 KLGQGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLL 101
+LG+G FG V++ + D Q + AVK++ L+ + E++ + L +V L
Sbjct: 100 RLGRGSFGEVHR--MEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
G +G + E + SL + +Q L + + + G+ YLH SR R
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ---GCLPEDRALYYLGQALEGLEYLH--SR-R 205
Query: 162 IIHRDLKASNVLLDQD-MNPKISDFGLARAFGGD---ETEGNTKRVIGTYGYMAPEYASD 217
I+H D+KA NVLL D + + DFG A D ++ + GT +MAPE
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 218 GQFSVKSDVFSFGILLLEIISG 239
K DV+S ++L +++G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 28 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 138
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+D+ +++DFG A+ +G T + GT Y+A
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 193
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 23/227 (10%)
Query: 26 LPLFELATIVSATNNFSINK-------KLGQGGFGPVYKGTLV-DGQEIAVKRL-SKISE 76
+P E A NF + +LG+G +G V K V GQ AVKR+ + ++
Sbjct: 14 IPTTENLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS 73
Query: 77 QGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSF---IFDQERCK 133
Q K L ++ + + + E + I + + SLD F + D+ +
Sbjct: 74 QEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTI 133
Query: 134 ILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 193
D + I + + +LH S+L +IHRD+K SNVL++ K DFG++
Sbjct: 134 PEDILGK--IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD 189
Query: 194 DETEGNTKRVIGTYGYMAPEYA----SDGQFSVKSDVFSFGILLLEI 236
D + G Y APE + +SVKSD++S GI +E+
Sbjct: 190 DVAKDIDA---GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 44/237 (18%)
Query: 35 VSATNNFSINKKLGQGGFGPVYKGTLVDGQE-IAVKRLSKISEQGL--KELKNEVILFSK 91
V +N+ I +G+G +G VY + ++ +A+K+++++ E + K + E+ + ++
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 92 LQHRNLVKLLGCCI-----QGEEKLLIYEFMTN---KSLDSFIF-DQERCKILDWSKRFH 142
L+ +++L I + +E ++ E + K + IF +E K
Sbjct: 82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKT-------- 133
Query: 143 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG---- 198
I+ G ++H+ IIHRDLK +N LL+QD + K+ DFGLAR ++
Sbjct: 134 ILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVND 190
Query: 199 ------------NTKRVIGTY----GYMAPEYASDGQFSVKS-DVFSFGILLLEIIS 238
N K+ + ++ Y APE + KS D++S G + E+++
Sbjct: 191 LEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 38 TNNFSINKKLGQGGFGPVYKGTLVD---GQEIAVKRLSK--------ISEQGLKELKNEV 86
+ +S LG G FG V+ T VD +E+ VK + K I + L ++ E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVW--TAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 87 ILFSKLQHRNLVKLLGCCI-QGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIIC 145
+ S+++H N++K+L QG +L++ + + L +FI +R LD +I
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFI---DRHPRLDEPLASYIFR 137
Query: 146 GTARGVMYLHQDSRLR-IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVI 204
V YL RL+ IIHRD+K N+++ +D K+ DFG A E
Sbjct: 138 QLVSAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFC 190
Query: 205 GTYGYMAPEYASDGQF-SVKSDVFSFGILLLEII 237
GT Y APE + + +++S G+ L ++
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 82 LKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRF 141
++ E+ + KL H ++K+ E+ ++ E M L + +R K F
Sbjct: 187 VETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 142 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEG 198
+ + V YLH++ IIHRDLK NVLL ++D KI+DFG ++ G E
Sbjct: 246 YQM---LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ET 295
Query: 199 NTKRVI-GTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISG 239
+ R + GT Y+APE ++ D +S G++L +SG
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 40/255 (15%)
Query: 12 EKTENDQIQNIDLELPLFELATIVSATNNFSINKK-LGQGGFGPVYKGTLVDGQEIAVKR 70
+K +I NI P FE + N +++K LG G G V G+ +AVKR
Sbjct: 14 KKGRKSRIANI----PNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKR 64
Query: 71 -LSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI--- 126
L + L E+K +L H N+++ C + L I + N +L +
Sbjct: 65 MLIDFCDIALMEIK---LLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESK 120
Query: 127 -FDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL--------DQD 177
E K+ ++ A GV +LH L+IIHRDLK N+L+ DQ
Sbjct: 121 NVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQ 177
Query: 178 MNPK-----ISDFGLARAF--GGDETEGNTKRVIGTYGYMAPEY---ASDGQFSVKSDVF 227
+ ISDFGL + G N GT G+ APE ++ + + D+F
Sbjct: 178 TGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIF 237
Query: 228 SFGILLLEIISGKKN 242
S G + I+S K+
Sbjct: 238 SMGCVFYYILSKGKH 252
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT Y+A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
P ++ D ++ G+L+ E+ +G
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 82 LKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRF 141
++ E+ + KL H ++K+ E+ ++ E M L + +R K F
Sbjct: 201 VETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 259
Query: 142 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEG 198
+ + V YLH++ IIHRDLK NVLL ++D KI+DFG ++ G E
Sbjct: 260 YQM---LLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ET 309
Query: 199 NTKRVI-GTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIISG 239
+ R + GT Y+APE ++ D +S G++L +SG
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 40/255 (15%)
Query: 12 EKTENDQIQNIDLELPLFELATIVSATNNFSINKK-LGQGGFGPVYKGTLVDGQEIAVKR 70
+K +I NI P FE + N +++K LG G G V G+ +AVKR
Sbjct: 14 KKGRKSRIANI----PNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKR 64
Query: 71 -LSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFI--- 126
L + L E+K +L H N+++ C + L I + N +L +
Sbjct: 65 MLIDFCDIALMEIK---LLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESK 120
Query: 127 -FDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLL--------DQD 177
E K+ ++ A GV +LH L+IIHRDLK N+L+ DQ
Sbjct: 121 NVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQ 177
Query: 178 MNPK-----ISDFGLARAF--GGDETEGNTKRVIGTYGYMAPEY---ASDGQFSVKSDVF 227
+ ISDFGL + G N GT G+ APE ++ + + D+F
Sbjct: 178 TGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIF 237
Query: 228 SFGILLLEIISGKKN 242
S G + I+S K+
Sbjct: 238 SMGCVFYYILSKGKH 252
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRLSKI-----SEQGLKELKNEVILFSKLQ 93
+F I K +G+G FG V + + + I A+K L+K +E + +V++ Q
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+ L Q E L L+ ++ L + + E K+ + RF+I G M
Sbjct: 135 ---WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED-KLPEDMARFYI------GEM 184
Query: 153 YLHQDS--RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
L DS +L +HRD+K NVLLD + + +++DFG D T + +GT Y+
Sbjct: 185 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYI 243
Query: 211 APEYASD-----GQFSVKSDVFSFGILLLEIISGK 240
+PE G++ + D +S G+ + E++ G+
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 34/225 (15%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKR-LSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 103
K LG G G V G+ +AVKR L + L E+K +L H N+++ C
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY-C 76
Query: 104 CIQGEEKLLIYEFMTNKSLDSFI----FDQERCKILDWSKRFHIICGTARGVMYLHQDSR 159
+ L I + N +L + E K+ ++ A GV +LH
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 133
Query: 160 LRIIHRDLKASNVLLD-------------QDMNPKISDFGLARAF--GGDETEGNTKRVI 204
L+IIHRDLK N+L+ +++ ISDFGL + G N
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 205 GTYGYMAPEYASDG-------QFSVKSDVFSFGILLLEIISGKKN 242
GT G+ APE + + + D+FS G + I+S K+
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 40 NFSINKKLGQGGFGPVYKGTLVDGQEI-AVKRLSKI-----SEQGLKELKNEVILFSKLQ 93
+F I K +G+G FG V + + + I A+K L+K +E + +V++ Q
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 94 HRNLVKLLGCCIQGEEKL-LIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVM 152
+ L Q E L L+ ++ L + + E K+ + RF+I G M
Sbjct: 151 ---WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED-KLPEDMARFYI------GEM 200
Query: 153 YLHQDS--RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYM 210
L DS +L +HRD+K NVLLD + + +++DFG D T + +GT Y+
Sbjct: 201 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYI 259
Query: 211 APEYASD-----GQFSVKSDVFSFGILLLEIISGK 240
+PE G++ + D +S G+ + E++ G+
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 46 KLGQGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLL 101
+LG+G FG V++ + D Q + AVK++ L+ + E++ + L +V L
Sbjct: 79 RLGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 130
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
G +G + E + SL I Q C L + + + G+ YLH R
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLI-KQMGC--LPEDRALYYLGQALEGLEYLHTR---R 184
Query: 162 IIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDETEGNTKRVI------GTYGYMAPEY 214
I+H D+KA NVLL D + DFG A + +G K ++ GT +MAPE
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCL---QPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
K D++S ++L +++G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 39 NNFSINKKLGQGGFGPVYKGTLV----DGQEIAVKRLSKISEQGLKELK---NEVILFSK 91
+ F K LG G FG V LV G A+K L K LK+++ NE +
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 92 LQHRNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGV 151
+ LVKL ++ E++ + S + + + + RF+ A+ V
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY----AAQIV 151
Query: 152 MYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTKRVIGTYGYMA 211
+ L +I+RDLK N+L+DQ +++DFG A+ +G T + GT +A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALA 206
Query: 212 PEYASDGQFSVKSDVFSFGILLLEIISG 239
PE ++ D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 34/225 (15%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKR-LSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 103
K LG G G V G+ +AVKR L + L E+K +L H N+++ C
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY-C 76
Query: 104 CIQGEEKLLIYEFMTNKSLDSFI----FDQERCKILDWSKRFHIICGTARGVMYLHQDSR 159
+ L I + N +L + E K+ ++ A GV +LH
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 133
Query: 160 LRIIHRDLKASNVLLD-------------QDMNPKISDFGLARAF--GGDETEGNTKRVI 204
L+IIHRDLK N+L+ +++ ISDFGL + G N
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 193
Query: 205 GTYGYMAPEYASDG-------QFSVKSDVFSFGILLLEIISGKKN 242
GT G+ APE + + + D+FS G + I+S K+
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 47 LGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQGLKELKNEVILFSKLQ-HRNLVKLLGCC 104
LG+G V L+ QE AVK + K + EV + + Q HRN+++L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 105 IQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLRIIH 164
+ + L++E M S+ S I + L+ S ++ A + +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IAH 134
Query: 165 RDLKASNVLLDQ--DMNP-KISDFGLARA--FGGDETEGNTKRVI---GTYGYMAPE--- 213
RDLK N+L + ++P KI DF L GD + +T ++ G+ YMAPE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 214 -YASDGQ-FSVKSDVFSFGILLLEIISG 239
++ + + + D++S G++L ++SG
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 41 FSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSK---ISEQGL--KELKNEVILFSKLQH 94
+ + + +G+G F V + + GQ+ AVK + S GL ++LK E + L+H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCK-ILDWSKRFHIICGTARGVMY 153
++V+LL +++EFM L I + + + H + + Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNP---KISDFGLARAFGGDETEGNTKRVIGTYGYM 210
H ++ IIHRD+K VLL N K+ FG+A G + +GT +M
Sbjct: 148 CHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFM 202
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE + DV+ G++L ++SG
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 46 KLGQGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLL 101
++G+G FG V++ + D Q + AVK++ L+ + E++ + L +V L
Sbjct: 81 RVGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
G +G + E + SL I Q C L + + + G+ YLH R
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLI-KQMGC--LPEDRALYYLGQALEGLEYLHTR---R 186
Query: 162 IIHRDLKASNVLLDQD-MNPKISDFGLARAFGGD---ETEGNTKRVIGTYGYMAPEYASD 217
I+H D+KA NVLL D + DFG A D ++ + GT +MAPE
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 218 GQFSVKSDVFSFGILLLEIISG 239
K D++S ++L +++G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 45 KKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKN-EVILFSKLQHRNLVKLLGC 103
K +G G FG V++ LV+ E+A+K++ + K KN E+ + ++H N+V L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 104 CIQ-GEEKLLIYEFMTNKSLDSFIFDQER--CKILDWSKRFHI---ICGTARGVMYLHQD 157
G++K ++ + + + ++ R K+ I + R + Y+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS- 159
Query: 158 SRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTKRVIGTYGYMAPEYA- 215
+ I HRD+K N+LLD K+ DFG A+ E N + Y Y APE
Sbjct: 160 --IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP--NVSXICSRY-YRAPELIF 214
Query: 216 SDGQFSVKSDVFSFGILLLEIISGK 240
++ D++S G ++ E++ G+
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 41 FSINKKLGQGGFGPVYKGTLVD-GQEIAVKRLSK---ISEQGL--KELKNEVILFSKLQH 94
+ + + +G+G F V + + GQ+ AVK + S GL ++LK E + L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 95 RNLVKLLGCCIQGEEKLLIYEFMTNKSLDSFIFDQERCK-ILDWSKRFHIICGTARGVMY 153
++V+LL +++EFM L I + + + H + + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 154 LHQDSRLRIIHRDLKASNVLLDQDMNP---KISDFGLARAFGGDETEGNTKRVIGTYGYM 210
H ++ IIHRD+K VLL N K+ FG+A G + +GT +M
Sbjct: 146 CHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFM 200
Query: 211 APEYASDGQFSVKSDVFSFGILLLEIISG 239
APE + DV+ G++L ++SG
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 46 KLGQGGFGPVYKGTLVDGQ---EIAVKRLSKISEQGLKELK-NEVILFSKLQHRNLVKLL 101
++G+G FG V++ + D Q + AVK++ L+ + E++ + L +V L
Sbjct: 65 RVGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 102 GCCIQGEEKLLIYEFMTNKSLDSFIFDQERCKILDWSKRFHIICGTARGVMYLHQDSRLR 161
G +G + E + SL I Q C L + + + G+ YLH R
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLI-KQMGC--LPEDRALYYLGQALEGLEYLHTR---R 170
Query: 162 IIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDETEGNTKRVI------GTYGYMAPEY 214
I+H D+KA NVLL D + DFG A + +G K ++ GT +MAPE
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCL---QPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 215 ASDGQFSVKSDVFSFGILLLEIISG 239
K D++S ++L +++G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,973,804
Number of Sequences: 62578
Number of extensions: 424114
Number of successful extensions: 3579
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 986
Number of HSP's gapped (non-prelim): 1210
length of query: 358
length of database: 14,973,337
effective HSP length: 100
effective length of query: 258
effective length of database: 8,715,537
effective search space: 2248608546
effective search space used: 2248608546
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)