BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018308
(358 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255584325|ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis]
gi|223527332|gb|EEF29478.1| rRNA methylase, putative [Ricinus communis]
Length = 334
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/364 (68%), Positives = 274/364 (75%), Gaps = 36/364 (9%)
Query: 1 MSTCRAI----IRTSF-SFVESKFYFLPSKSFLSLSLRSQKPGPISPYSVRTRQYGSVQA 55
MSTCR + IR S S +SK FL P PY R Y S+QA
Sbjct: 1 MSTCRTLNLTQIRISICSLKKSKPCFL-------------NPRTAGPYRPSARSYSSIQA 47
Query: 56 A-ISLENGNNLIDDENDTPSKDNVEKLLTNPDDVTQFMKMERSCMVNDGVGSMESLSNKR 114
A +SLE+ + D +N+T VE LL+N DDV + MKMER S R
Sbjct: 48 AAVSLESAD---DSKNET-----VEHLLSNRDDVLRLMKMERRPDAEK--------SGSR 91
Query: 115 WFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNV 174
WFPYLDRYKCG LS SEV+EA+ PY+ME+RKERF NVVKNRSYSVCLVVEGLSDFGNV
Sbjct: 92 WFPYLDRYKCGSGELSGSEVLEAVGPYIMEDRKERFANVVKNRSYSVCLVVEGLSDFGNV 151
Query: 175 SATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGY 234
SA FRSADALG QSVHVVSCDSSKRYR+NRHVSMGAEKWLDIELWD+ +ECF VL+SRGY
Sbjct: 152 SAAFRSADALGFQSVHVVSCDSSKRYRDNRHVSMGAEKWLDIELWDSTQECFEVLKSRGY 211
Query: 235 RIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
RIATTHVGMDA+S+YDMDWSCPTAIVVGNENRG+SDEAL LSDL CSIPMKGMVDSFNVS
Sbjct: 212 RIATTHVGMDAVSIYDMDWSCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVS 271
Query: 295 VAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETTH 354
VAAGILMH AVCDR +RL G +GDLT E ++LLAEFSLRHSKSAISI HEYAKRK T
Sbjct: 272 VAAGILMHQAVCDRTSRL-GSHGDLTLAESRVLLAEFSLRHSKSAISIAHEYAKRKAATP 330
Query: 355 MPKL 358
MPKL
Sbjct: 331 MPKL 334
>gi|225452930|ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis
vinifera]
Length = 372
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/378 (64%), Positives = 285/378 (75%), Gaps = 29/378 (7%)
Query: 1 MSTCRAIIRTSFSFVE-------SKFYFLP-----SKSFLSLSLR--------SQKPGPI 40
MS C+ ++R S S +E F F+P S S +S SLR S +
Sbjct: 4 MSACKTLVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSISLGL 63
Query: 41 SPYSVRTRQYGSVQAAISLENGNNLIDDENDTPSKDNVEKLLTNPDDVTQFMKMERSCMV 100
+ + + +R Y V ++ +E +L DD N KD VE LLTN DDV + MKMER M
Sbjct: 64 TRHKLHSRPYVHVAESVGVET-TDLEDDSN----KDIVEHLLTNTDDVGRLMKMERRSMT 118
Query: 101 NDGVGSMESLSNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYS 160
DG E + +KRWFPYLD++K G +LSSSE++EA+ PY+ME RKERF NVVK+RSYS
Sbjct: 119 GDG---GELIQSKRWFPYLDKFKTGTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYS 175
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
VCLVVEGL DFGNVSA FRSADALG QSVHVVSCDSSKRY++NRHVSMGAEKWLDIELW+
Sbjct: 176 VCLVVEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKRYKDNRHVSMGAEKWLDIELWN 235
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+ +ECF VL+SRGYRIATTHVGMDA+S+YDMDW+CPTAIVVGNENRG+SDEAL LSDL C
Sbjct: 236 STQECFEVLKSRGYRIATTHVGMDAVSIYDMDWTCPTAIVVGNENRGISDEALELSDLHC 295
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAI 340
SIPMKGMVDSFNVSVAAGILMHHAVCDR +RL G +GDL+ EE +ILLAEFSLRHSKSA
Sbjct: 296 SIPMKGMVDSFNVSVAAGILMHHAVCDRTSRL-GSHGDLSLEESRILLAEFSLRHSKSAN 354
Query: 341 SIVHEYAKRKETTHMPKL 358
SI HE+AKRK + + KL
Sbjct: 355 SIAHEFAKRKAASPVSKL 372
>gi|296082972|emb|CBI22273.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/378 (64%), Positives = 285/378 (75%), Gaps = 29/378 (7%)
Query: 1 MSTCRAIIRTSFSFVE-------SKFYFLP-----SKSFLSLSLR--------SQKPGPI 40
MS C+ ++R S S +E F F+P S S +S SLR S +
Sbjct: 1 MSACKTLVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSISLGL 60
Query: 41 SPYSVRTRQYGSVQAAISLENGNNLIDDENDTPSKDNVEKLLTNPDDVTQFMKMERSCMV 100
+ + + +R Y V ++ +E +L DD N KD VE LLTN DDV + MKMER M
Sbjct: 61 TRHKLHSRPYVHVAESVGVET-TDLEDDSN----KDIVEHLLTNTDDVGRLMKMERRSMT 115
Query: 101 NDGVGSMESLSNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYS 160
DG E + +KRWFPYLD++K G +LSSSE++EA+ PY+ME RKERF NVVK+RSYS
Sbjct: 116 GDG---GELIQSKRWFPYLDKFKTGTTFLSSSEILEAMDPYIMEVRKERFRNVVKSRSYS 172
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
VCLVVEGL DFGNVSA FRSADALG QSVHVVSCDSSKRY++NRHVSMGAEKWLDIELW+
Sbjct: 173 VCLVVEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKRYKDNRHVSMGAEKWLDIELWN 232
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+ +ECF VL+SRGYRIATTHVGMDA+S+YDMDW+CPTAIVVGNENRG+SDEAL LSDL C
Sbjct: 233 STQECFEVLKSRGYRIATTHVGMDAVSIYDMDWTCPTAIVVGNENRGISDEALELSDLHC 292
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAI 340
SIPMKGMVDSFNVSVAAGILMHHAVCDR +RL G +GDL+ EE +ILLAEFSLRHSKSA
Sbjct: 293 SIPMKGMVDSFNVSVAAGILMHHAVCDRTSRL-GSHGDLSLEESRILLAEFSLRHSKSAN 351
Query: 341 SIVHEYAKRKETTHMPKL 358
SI HE+AKRK + + KL
Sbjct: 352 SIAHEFAKRKAASPVSKL 369
>gi|449438036|ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
[Cucumis sativus]
Length = 370
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/363 (61%), Positives = 274/363 (75%), Gaps = 17/363 (4%)
Query: 1 MSTCRAIIRTSFSFVES----------KFYFLPSKSFLSLSLR-SQKPGPISPYSVRTRQ 49
M++CR + R+S ++S FLPS S SL + + +P +V TR
Sbjct: 1 MASCRIVSRSSLFLLQSCSPRRTQRIFSSVFLPSLHLPSFSLFFTNRFSRSNPNAVSTRC 60
Query: 50 YGSVQAAISLENGNNLIDDEN--DTPSKDNVEKLLTNPDDVTQFMKMERSCMVNDGVGSM 107
+ S+ AA S +++ D + ++D VE LLT+ +DV + MKMER + DG
Sbjct: 61 FASISAATSPLEVEDIVADVEPPEVRTQDTVEHLLTHSNDVARLMKMERRSVELDGA--- 117
Query: 108 ESLSNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEG 167
E RWFPYLD+Y CG +L+S E++EAL +++ RKERF NVV+NRSYSVCLVVEG
Sbjct: 118 EYPHKGRWFPYLDKYSCGSSWLNSGEILEALDSLILDSRKERFKNVVRNRSYSVCLVVEG 177
Query: 168 LSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFN 227
L+DFGNVSA FRSADALG QSVHVVSCD+SKRYRENRHVSMGAEKWLDIELW++ ECF
Sbjct: 178 LTDFGNVSAAFRSADALGFQSVHVVSCDASKRYRENRHVSMGAEKWLDIELWNSTPECFK 237
Query: 228 VLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGM 287
+L+SRGYRI +TH+G +A+SVYDMDWSCPTAIVVGNE+RG+S+EAL LSDL CSIPM GM
Sbjct: 238 ILKSRGYRIVSTHLGANAVSVYDMDWSCPTAIVVGNESRGISNEALELSDLHCSIPMNGM 297
Query: 288 VDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYA 347
VDSFNVSVAAGILMHHAVC+R +RL GC+GDLTSEE+QILLAEFSLRHSKSAISI +E A
Sbjct: 298 VDSFNVSVAAGILMHHAVCNRTSRL-GCHGDLTSEERQILLAEFSLRHSKSAISIANELA 356
Query: 348 KRK 350
KRK
Sbjct: 357 KRK 359
>gi|297807561|ref|XP_002871664.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317501|gb|EFH47923.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 350
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/361 (62%), Positives = 271/361 (75%), Gaps = 26/361 (7%)
Query: 1 MSTCRAIIR---TSFSFV------ESKFYFLPSKSFLSLSLRSQKPGPISPYSVRTRQYG 51
M++C++IIR +SF FV S + LP ++F LS+ P I R +
Sbjct: 1 MNSCKSIIRASISSFPFVPLPNPNSSITFILPVRAFPPLSVLHPNPSCIG---TARRTFH 57
Query: 52 SVQAAISLENGNNLIDDENDTPSKDNVEKLLT-NPDDVTQFMKMERSCMVNDGVGSMESL 110
V AA+S E+ D+P KD V+ LLT N D + MKMER C ++DG G
Sbjct: 58 GV-AALSPESLTE------DSP-KDTVKDLLTTNRGDASSMMKMERRCSLSDGEGDCRG- 108
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSD 170
WFPY DR++C +V+LSS EV+EA++P++MEER +RF VV+NRS+SVCLVVEGLSD
Sbjct: 109 ---SWFPYEDRFRCAEVHLSSREVLEAVTPHMMEERTDRFRRVVENRSFSVCLVVEGLSD 165
Query: 171 FGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLR 230
FGN+SA FRSADALG+QSVHVVSC SSKRY NRHVSMGAEKWLDIE WD P+ECF VL+
Sbjct: 166 FGNISAAFRSADALGIQSVHVVSCGSSKRYNGNRHVSMGAEKWLDIEFWDTPKECFKVLK 225
Query: 231 SRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDS 290
SRGYRIATTH+GMD +S+YDMDWSCPTAIVVGNE RG+ DEAL LSDLRCSIPM GMVDS
Sbjct: 226 SRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGICDEALELSDLRCSIPMNGMVDS 285
Query: 291 FNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
FNVSVAAGILMHHAV DR TRL G +GDL+ EK+IL+AEFSLRHS+S+ISI +E+AKRK
Sbjct: 286 FNVSVAAGILMHHAVSDRTTRL-GSHGDLSEAEKEILMAEFSLRHSRSSISIAYEFAKRK 344
Query: 351 E 351
+
Sbjct: 345 Q 345
>gi|15242287|ref|NP_197043.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
thaliana]
gi|7671508|emb|CAB89349.1| rRNA methylase-like protein [Arabidopsis thaliana]
gi|110737570|dbj|BAF00727.1| rRNA methylase - like protein [Arabidopsis thaliana]
gi|332004772|gb|AED92155.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
thaliana]
Length = 350
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/354 (62%), Positives = 269/354 (75%), Gaps = 13/354 (3%)
Query: 1 MSTCRAIIRTSFSFVESKFYFLPSKSFLSLSLRSQKPGPISPYSVRTRQYGSVQAAISLE 60
M++C+++IR S S F LP+ +F S++ S + SP SV + A
Sbjct: 1 MNSCKSLIRASISSF--PFVPLPNPNF-SITFISVRA--FSPLSVLHPNSSCIVTARRTF 55
Query: 61 NGNNLIDDENDTPS--KDNVEKLLT-NPDDVTQFMKMERSCMVNDGVGSMESLSNKRWFP 117
+G + E+ T KD V+ LLT N + + MKMER C +++G G WFP
Sbjct: 56 HGAVALSPESLTEESPKDTVKGLLTTNRGEASSLMKMERRCSLSNGEGDCRG----SWFP 111
Query: 118 YLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSAT 177
Y DR++CG+V+LSS EV+EA+SP++MEER +RF VV+NRSYSVCLVVEGLSDFGN+SA
Sbjct: 112 YEDRFRCGEVHLSSREVLEAVSPHMMEERTDRFRRVVENRSYSVCLVVEGLSDFGNISAA 171
Query: 178 FRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIA 237
FRSADALG+QSVHVVSCDSSKRY NRHVSMGAEKWLDIE WD P+ECF VL+SRGYRIA
Sbjct: 172 FRSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKWLDIEFWDTPKECFKVLKSRGYRIA 231
Query: 238 TTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAA 297
TTH+GMD +S+YDMDWSCPTAIVVGNE RG+SDEAL LSDLRCSIPM GMVDSFNVSVAA
Sbjct: 232 TTHLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALELSDLRCSIPMNGMVDSFNVSVAA 291
Query: 298 GILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
GILMHHAV DR TRL G +GDL+ EK+IL+AEFSLRHS+S+I I +E+AKRK+
Sbjct: 292 GILMHHAVSDRTTRL-GSHGDLSEAEKEILMAEFSLRHSRSSICIAYEFAKRKQ 344
>gi|224080139|ref|XP_002306029.1| predicted protein [Populus trichocarpa]
gi|222848993|gb|EEE86540.1| predicted protein [Populus trichocarpa]
Length = 269
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/273 (75%), Positives = 231/273 (84%), Gaps = 5/273 (1%)
Query: 86 DDVTQFMKMERSCMVNDGVGSMESLSNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEE 145
DDV + MKMER +++ WFPY DR+KC V LSSSEV+EA+ PY+MEE
Sbjct: 2 DDVLRLMKMERRITKTHD----DTVLGSHWFPYFDRFKCEGVDLSSSEVLEAVGPYMMEE 57
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
RKER N VK+RSYS+CLVVEGL+DFGNVSA FRSADALG QSVHV+SCDSSKRY+ENRH
Sbjct: 58 RKERIRNTVKSRSYSLCLVVEGLTDFGNVSAVFRSADALGFQSVHVISCDSSKRYKENRH 117
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
VSMGAEKWLDIELWD+ ++CF VL+SRGYRIATTHVG+DA+S+YDMDWSCPTAIVVGNEN
Sbjct: 118 VSMGAEKWLDIELWDSAKDCFQVLKSRGYRIATTHVGIDAVSIYDMDWSCPTAIVVGNEN 177
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQ 325
RG+SDEAL LSDL CSIPMKGMVDSFNVSVAAGILMHHAVCDR +RL G +GDLT EE Q
Sbjct: 178 RGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVCDRTSRL-GSHGDLTPEETQ 236
Query: 326 ILLAEFSLRHSKSAISIVHEYAKRKETTHMPKL 358
ILLAEFSLRHSK+ ISI H+YAKRK T PKL
Sbjct: 237 ILLAEFSLRHSKNMISIAHDYAKRKAATPKPKL 269
>gi|356523592|ref|XP_003530421.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
[Glycine max]
Length = 322
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/286 (69%), Positives = 239/286 (83%), Gaps = 9/286 (3%)
Query: 69 ENDTPSKDNVEKLLTNPDDVTQFMKMERSCMVNDGVGSMESLSNKRWFPYLDRYKCGD-V 127
E P +V+ LLT+PD V+ MKM+R + + + RWFPYLD Y+C +
Sbjct: 43 EEPEPQSPSVQHLLTSPDGVSTLMKMDRKPL-------LPHEPHVRWFPYLDAYRCRNGC 95
Query: 128 YLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQ 187
LSS+EVV+AL+P + ++R++RF +VV+NRSYSVCLVVEGL DFGNVSATFRSADALGVQ
Sbjct: 96 VLSSAEVVQALAPCISDDRRQRFGSVVRNRSYSVCLVVEGLCDFGNVSATFRSADALGVQ 155
Query: 188 SVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAIS 247
SVHVVSCD++KRY++NRHVSMGAEKWLDIELWD+ +ECF +L+SRGYRIATTHVGMDA+S
Sbjct: 156 SVHVVSCDANKRYKDNRHVSMGAEKWLDIELWDSTKECFKMLKSRGYRIATTHVGMDAVS 215
Query: 248 VYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCD 307
++D+DWSCPTAIVVGNENRG+SDEAL LSDL CSIPM GMVDSFNVSVAAGILMHH+VCD
Sbjct: 216 IHDLDWSCPTAIVVGNENRGISDEALELSDLHCSIPMAGMVDSFNVSVAAGILMHHSVCD 275
Query: 308 RATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETT 353
R +R+ G +GDLT EE QILLAEFSLRHSKS+ISIV +YA RK T
Sbjct: 276 RISRM-GRHGDLTVEECQILLAEFSLRHSKSSISIVEDYAMRKAAT 320
>gi|357502123|ref|XP_003621350.1| tRNA guanosine-2'-O-methyltransferase [Medicago truncatula]
gi|355496365|gb|AES77568.1| tRNA guanosine-2'-O-methyltransferase [Medicago truncatula]
Length = 322
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/353 (60%), Positives = 257/353 (72%), Gaps = 35/353 (9%)
Query: 1 MSTCRAIIRTSFSFVESKFYFLPSKSFLSLSLRSQKPGPISPYSVRTRQYGSVQAAISLE 60
MS+C+ ++ +S S S F F PS LS SLR K Y+ T Q
Sbjct: 1 MSSCKTMLCSSLS---STFKFKPS---LSSSLRRHKSTSRCCYT--TPQ----------- 41
Query: 61 NGNNLIDDENDTPSKDNVEKLLTNPDDVTQFMKMERSCMVNDGVGSMESLSNKRWFPYLD 120
I NDT + +L + + VT MKM+R + + + RWFPYLD
Sbjct: 42 --TTAIPQPNDT-----IHNILNSNEGVTTLMKMQRKPLHHQP-------TQPRWFPYLD 87
Query: 121 RYKCGD-VYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFR 179
++C + ++SSEV+EA+ P + E RKERF V NRSY+VCLVVEGL DFGNVSA FR
Sbjct: 88 SFRCENGCEVTSSEVIEAVGPCISETRKERFGKAVLNRSYNVCLVVEGLCDFGNVSAAFR 147
Query: 180 SADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATT 239
SADALGVQSVHVVS D++KRY++NRHVSMGAEKWLDIELWD+ +ECF +L+SRGYRIATT
Sbjct: 148 SADALGVQSVHVVSSDANKRYKDNRHVSMGAEKWLDIELWDSTKECFEMLKSRGYRIATT 207
Query: 240 HVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGI 299
HVG+DA+S+YDMDWSCPTAIVVGNENRG+SDEAL++SDL CSIPMKGMVDSFNVSVAAGI
Sbjct: 208 HVGIDAVSIYDMDWSCPTAIVVGNENRGISDEALAMSDLHCSIPMKGMVDSFNVSVAAGI 267
Query: 300 LMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKET 352
LMHHAVCDR +R G +GDLT EE+QILLAEFSLRHS SAIS+V +YAKRK +
Sbjct: 268 LMHHAVCDRISR-TGRHGDLTVEERQILLAEFSLRHSNSAISVVEDYAKRKAS 319
>gi|40715982|gb|AAR88654.1| rRNA methylase-like protein [Viscum album]
Length = 368
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/331 (61%), Positives = 251/331 (75%), Gaps = 14/331 (4%)
Query: 30 LSLRSQKPGPISPYSVR--TRQYGSVQAAISLE-NGNNLIDDENDTPSKDNVEKLLTNPD 86
++LRS G +S Y+ R +R A++LE +G+ + + + SK+ VEKLL++
Sbjct: 48 VTLRSPNLG-LSIYTPRAPSRFCSFSHGALALEISGDGVTSETLEGSSKETVEKLLSDRT 106
Query: 87 DVTQFMKMERSCMVNDGVGSMESLSNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEER 146
+V + MKMER +E+ + RWFPYLD +K G++ LSSSE++EAL P+++ R
Sbjct: 107 NVDRMMKMERK---------LEATEHTRWFPYLDMFKAGNIDLSSSEILEALDPFILGSR 157
Query: 147 KERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHV 206
KER +VVKNRSYSV LVVEG +DFGN+SA FRSADALG+QSVHV+SC SSKRYRENRHV
Sbjct: 158 KERIKDVVKNRSYSVWLVVEGATDFGNISAVFRSADALGLQSVHVISCGSSKRYRENRHV 217
Query: 207 SMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENR 266
SMGAEKWLDIELWD+ +ECF L+SRGYRI T H+ DA+S+Y+MDW+ PTAIV GNE R
Sbjct: 218 SMGAEKWLDIELWDSTQECFRNLKSRGYRIVTAHLESDAVSIYNMDWTSPTAIVTGNEKR 277
Query: 267 GVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQI 326
G+S+EAL LSDL CSIPM+GMVDS NVSVAAGILMHHAV DR RL G +GDLT E+QI
Sbjct: 278 GISEEALGLSDLHCSIPMRGMVDSLNVSVAAGILMHHAVRDRTLRL-GGHGDLTMGERQI 336
Query: 327 LLAEFSLRHSKSAISIVHEYAKRKETTHMPK 357
LLAEFSLRHS ISIVHE+A RK + MP+
Sbjct: 337 LLAEFSLRHSNRMISIVHEHAARKPVSPMPR 367
>gi|242046186|ref|XP_002460964.1| hypothetical protein SORBIDRAFT_02g038320 [Sorghum bicolor]
gi|241924341|gb|EER97485.1| hypothetical protein SORBIDRAFT_02g038320 [Sorghum bicolor]
Length = 354
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/302 (62%), Positives = 227/302 (75%), Gaps = 14/302 (4%)
Query: 67 DDENDTPSKDNVEKLL-TNPDD------VTQFMKMERSCMVNDGVGSMESLSNKRWFPYL 119
DDE+ D VE+LL P + + MK++R + G+ +RWFPYL
Sbjct: 57 DDEDGV---DTVEQLLHPRPPAAGSRVRIDRLMKLQRRADGDPVPGAAGPGGRRRWFPYL 113
Query: 120 DRYKCGDVY---LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSA 176
D ++ LSS EV+E L P+++E R++R V NRSY+VCLVVEGLSDFGNVSA
Sbjct: 114 DAFRPAAAGAAELSSGEVIEVLEPHILEARRDRIRRAVGNRSYAVCLVVEGLSDFGNVSA 173
Query: 177 TFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI 236
FRSADALGVQSVHV+SCDSSKRYR+NRHVSMGAEKWLDIE+W++P ECF+ L+ RGYRI
Sbjct: 174 AFRSADALGVQSVHVISCDSSKRYRDNRHVSMGAEKWLDIEIWNSPAECFSALKKRGYRI 233
Query: 237 ATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVA 296
ATT++G D++ VYDMDWS PTAIVVGNE RG+SD+AL LSDL CS+PMKGMVDSFNVSVA
Sbjct: 234 ATTYLGTDSVCVYDMDWSQPTAIVVGNELRGISDDALELSDLHCSVPMKGMVDSFNVSVA 293
Query: 297 AGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETTHMP 356
AGILMHHAVCDR +RL G +GDL EE +ILLAEF LRH +S +IVHEYAKRK M
Sbjct: 294 AGILMHHAVCDRVSRL-GHHGDLLPEENRILLAEFYLRHRESTATIVHEYAKRKAENFMA 352
Query: 357 KL 358
+L
Sbjct: 353 RL 354
>gi|308044253|ref|NP_001183802.1| hypothetical protein [Zea mays]
gi|238014636|gb|ACR38353.1| unknown [Zea mays]
gi|414887444|tpg|DAA63458.1| TPA: hypothetical protein ZEAMMB73_227248 [Zea mays]
Length = 347
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/305 (61%), Positives = 226/305 (74%), Gaps = 22/305 (7%)
Query: 67 DDENDTPSKDNVEKLL-TNPDD----------VTQFMKMERSCMVNDGVGSMESLSNKRW 115
DDE+ D VE+LL P + + + MK++R G +RW
Sbjct: 52 DDEDGV---DTVEQLLHPRPPETSAPAGSRGRIDRLMKLQRRAD-----GDAVPGGRRRW 103
Query: 116 FPYLDRYK--CGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGN 173
FPYLD ++ G LSS EV++ L P+++E R++R V NRSY+VCLVVEGLSDFGN
Sbjct: 104 FPYLDAFRPAAGGAELSSGEVIDVLEPHILEARRDRIRQAVGNRSYAVCLVVEGLSDFGN 163
Query: 174 VSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRG 233
VSA FRSADALGVQSVHV+SCDSSKRYR+NRHVSMGAEKWLDIE+W++P ECF+ L+ RG
Sbjct: 164 VSAAFRSADALGVQSVHVISCDSSKRYRDNRHVSMGAEKWLDIEIWNSPAECFSALKKRG 223
Query: 234 YRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNV 293
YRIATT++G D++ VYDMDWS PTAIVVGNE RG+SD+AL LSDL CSIPMKGMVDSFNV
Sbjct: 224 YRIATTYLGTDSVCVYDMDWSQPTAIVVGNELRGISDDALELSDLHCSIPMKGMVDSFNV 283
Query: 294 SVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETT 353
SVAAGILMHHAVCDR +RL G +GDL EE +ILLAEF LRH +S +IVHEYAK K
Sbjct: 284 SVAAGILMHHAVCDRVSRL-GHHGDLLPEENRILLAEFYLRHRESTATIVHEYAKMKAGK 342
Query: 354 HMPKL 358
M +L
Sbjct: 343 VMTRL 347
>gi|357122113|ref|XP_003562760.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
[Brachypodium distachyon]
Length = 347
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 242/347 (69%), Gaps = 14/347 (4%)
Query: 19 FYFLPSKSFLSLSLRSQKPGPISPYSVRTRQYGSVQAAISLENGNNLIDDENDTPSKDNV 78
FY L S +F + RS+ P P G + A +L D + D V
Sbjct: 8 FYSLAS-AFAPYAPRSRLPHPPLRLLGLHLNSGHILRASTLSTAAATDADADPYEGVDTV 66
Query: 79 EKLLT------NPDDVTQFMKMERSCMVNDGVGSMESLSNKRWFPYLDRYK-CGDVYLSS 131
E+LL P + + MKM+R DG G + RWFPYLD ++ G V ++S
Sbjct: 67 EQLLAPKPASPGPSRMGRLMKMQRRA---DGEGL--AAGRGRWFPYLDAFRGAGGVDVTS 121
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
E+V+ L PY++E R++R ++RSYSVCLVVEGLSDFGNVSA FRSADALGVQSVHV
Sbjct: 122 QEIVDVLEPYILEPRRDRIRRAAESRSYSVCLVVEGLSDFGNVSAAFRSADALGVQSVHV 181
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
+SC+++KRYR+NRHVSMGAEKWLDIELW++P ECF+ L+ RGYRIATT +G D++SVYDM
Sbjct: 182 ISCENNKRYRDNRHVSMGAEKWLDIELWNSPAECFDALKKRGYRIATTCLGTDSVSVYDM 241
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
DWS PTAIVVGNE G+SD AL+LSDL C +PMKGMVDSFNVSVAAGILMHHAVCDR +R
Sbjct: 242 DWSHPTAIVVGNETMGISDAALNLSDLHCCVPMKGMVDSFNVSVAAGILMHHAVCDRVSR 301
Query: 312 LVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETTHMPKL 358
L G +GDL EE +ILLAEF LRH +S +++HEYAKRK + KL
Sbjct: 302 L-GQHGDLLPEESRILLAEFYLRHRESTATVIHEYAKRKADNFVAKL 347
>gi|326517717|dbj|BAK03777.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/290 (63%), Positives = 221/290 (76%), Gaps = 13/290 (4%)
Query: 76 DNVEKLL----TNPDD--VTQFMKMERSCMVNDGVGSMESLSNKRWFPYLDRYK-CGDVY 128
D VE LL T+P + + MKM+R + V RWFPYLD ++ G V
Sbjct: 68 DTVEHLLAPKPTSPGGGRMGRLMKMQRRADADGPVAG-----RGRWFPYLDAFRGAGGVE 122
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
++S EVV+ L PY++E R++R V++RSYSVCLVVEGL+DFGNVSA FRSADALGVQS
Sbjct: 123 VTSQEVVDVLEPYILEPRRDRIRRAVQSRSYSVCLVVEGLTDFGNVSAAFRSADALGVQS 182
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
VHV+SC+ +KRYR+NRHVSMGAEKWLDIELW +P ECF+ L+ RGYRIA T +G D++SV
Sbjct: 183 VHVISCEDNKRYRDNRHVSMGAEKWLDIELWSSPAECFDALKKRGYRIACTSLGSDSVSV 242
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
YDMDWS PTAIVVGNE G+SD AL LSD+ CS+PMKGMVDSFNVSVAAGILMHHAV DR
Sbjct: 243 YDMDWSHPTAIVVGNETMGISDVALKLSDMHCSVPMKGMVDSFNVSVAAGILMHHAVYDR 302
Query: 309 ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETTHMPKL 358
+RL G NGDLT EE +ILLAEF LRH +S +++HEYAKRK T + KL
Sbjct: 303 VSRL-GQNGDLTPEENRILLAEFYLRHRESTSTVIHEYAKRKATNLVAKL 351
>gi|34393586|dbj|BAC83213.1| putative rRNA methylase [Oryza sativa Japonica Group]
gi|215686941|dbj|BAG90774.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 343
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 188/296 (63%), Positives = 223/296 (75%), Gaps = 18/296 (6%)
Query: 76 DNVEKLL-TNP-----------DDVTQFMKMERSCMVNDGVGSMESLSNKRWFPYLDRYK 123
D VE+LL T P + + MK++R + G + +RWFPYLD ++
Sbjct: 53 DTVEQLLVTKPPASSSSSSAGRGRIDRLMKLQRRADGDFPPGG----AGRRWFPYLDAFR 108
Query: 124 C-GDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSAD 182
G V L+S EV+E L P++ME R+ER V+NRSYSVCLVVEGLSDFGNVSA FRSAD
Sbjct: 109 AAGGVELTSREVLEVLEPHIMEARRERIRRAVENRSYSVCLVVEGLSDFGNVSAAFRSAD 168
Query: 183 ALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVG 242
ALGVQSVHV+SCD++KRYR+NRHVSMGAEKWLDIELW + ECF+ L+ RGYRIATT++G
Sbjct: 169 ALGVQSVHVISCDNNKRYRDNRHVSMGAEKWLDIELWSSTAECFDALKKRGYRIATTYLG 228
Query: 243 MDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
D++ VYDMDWS PTAIVVGNE G+SD+AL LSDL CS+PMKGMVDSFNVSVAAGILMH
Sbjct: 229 NDSVCVYDMDWSQPTAIVVGNELMGISDDALKLSDLHCSVPMKGMVDSFNVSVAAGILMH 288
Query: 303 HAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETTHMPKL 358
HAVCDR +R +G +GDL EE +ILLAEF LRH +S IVHEYAKRK M KL
Sbjct: 289 HAVCDRISR-IGHHGDLLPEESRILLAEFYLRHRQSTAGIVHEYAKRKAGNFMAKL 343
>gi|218199964|gb|EEC82391.1| hypothetical protein OsI_26737 [Oryza sativa Indica Group]
Length = 343
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 188/296 (63%), Positives = 223/296 (75%), Gaps = 18/296 (6%)
Query: 76 DNVEKLL-TNP-----------DDVTQFMKMERSCMVNDGVGSMESLSNKRWFPYLDRYK 123
D VE+LL T P + + MK++R + G + +RWFPYLD ++
Sbjct: 53 DTVEQLLVTKPPASSSSSSAGRGRIDRLMKLQRRADGDFPPGG----AGRRWFPYLDAFR 108
Query: 124 C-GDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSAD 182
G V L+S EV+E L P++ME R+ER V+NRSYSVCLVVEGLSDFGNVSA FRSAD
Sbjct: 109 AAGGVELTSREVLEVLEPHIMEARRERIRRAVENRSYSVCLVVEGLSDFGNVSAAFRSAD 168
Query: 183 ALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVG 242
ALGVQSVHV+SCD++KRYR+NRHVSMGAEKWLDIELW + ECF+ L+ RGYRIATT++G
Sbjct: 169 ALGVQSVHVISCDNNKRYRDNRHVSMGAEKWLDIELWSSTAECFDALKKRGYRIATTYLG 228
Query: 243 MDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
D++ VYDMDWS PTAIVVGNE G+SD+AL LSDL CS+PMKGMVDSFNVSVAAGILMH
Sbjct: 229 NDSVCVYDMDWSQPTAIVVGNELMGISDDALKLSDLHCSVPMKGMVDSFNVSVAAGILMH 288
Query: 303 HAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETTHMPKL 358
HAVCDR +R +G +GDL EE +ILLAEF LRH +S IVHEYAKRK M KL
Sbjct: 289 HAVCDRISR-IGHHGDLLPEESRILLAEFYLRHRESTAGIVHEYAKRKAGNFMAKL 343
>gi|125600959|gb|EAZ40535.1| hypothetical protein OsJ_24991 [Oryza sativa Japonica Group]
Length = 263
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 177/249 (71%), Positives = 206/249 (82%), Gaps = 2/249 (0%)
Query: 111 SNKRWFPYLDRYKC-GDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLS 169
+ +RWFPYLD ++ G V L+S EV+E L P++ME R+ER V+NRSYSVCLVVEGLS
Sbjct: 16 AGRRWFPYLDAFRAAGGVELTSREVLEVLEPHIMEARRERIRRAVENRSYSVCLVVEGLS 75
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
DFGNVSA FRSADALGVQSVHV+SCD++KRYR+NRHVSMGAEKWLDIELW + ECF+ L
Sbjct: 76 DFGNVSAAFRSADALGVQSVHVISCDNNKRYRDNRHVSMGAEKWLDIELWSSTAECFDAL 135
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ RGYRIATT++G D++ VYDMDWS PTAIVVGNE G+SD+AL LSDL CS+PMKGMVD
Sbjct: 136 KKRGYRIATTYLGNDSVCVYDMDWSQPTAIVVGNELMGISDDALKLSDLHCSVPMKGMVD 195
Query: 290 SFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
SFNVSVAAGILMHHAVCDR +R +G +GDL EE +ILLAEF LRH +S IVHEYAKR
Sbjct: 196 SFNVSVAAGILMHHAVCDRISR-IGHHGDLLPEESRILLAEFYLRHRQSTAGIVHEYAKR 254
Query: 350 KETTHMPKL 358
K M KL
Sbjct: 255 KAGNFMAKL 263
>gi|294463916|gb|ADE77479.1| unknown [Picea sitchensis]
Length = 327
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 163/273 (59%), Positives = 208/273 (76%), Gaps = 11/273 (4%)
Query: 81 LLTNPDDVTQFMKMER-SCMVNDGVG-------SMESLSNKR--WFPYLDRYKCGDVYLS 130
L ++ ++ MKMER S + G G + +N++ WFPY+D +K GDV +S
Sbjct: 42 LQKKANEPSKLMKMERFSDIRESGSGCCFLDSQDLSGSTNRKGCWFPYMDEFKSGDVTVS 101
Query: 131 SSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH 190
SSEV++AL PY++E RK++ VV NR+YS+CLVVEGL+DFGN+SA R+ADALG QSVH
Sbjct: 102 SSEVLQALDPYIVETRKKKIREVVMNRTYSICLVVEGLTDFGNISAVIRTADALGFQSVH 161
Query: 191 VVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD 250
V++ DS+KRY+++R+VSMG+EKWLDIE WD ECF VLRSRGYRIA THVG D +SV+D
Sbjct: 162 VITNDSTKRYKKSRNVSMGSEKWLDIEQWDNTWECFEVLRSRGYRIAVTHVGNDTVSVHD 221
Query: 251 MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
MDW+ PTAIV+GNE+RG+S EAL SD++CSIPM GMVDSFNVSVAAGI MH AV DR +
Sbjct: 222 MDWTLPTAIVLGNEHRGISGEALKFSDIKCSIPMTGMVDSFNVSVAAGIFMHAAVHDRIS 281
Query: 311 RLVGCNGDLTSEEKQILLAEFSLRHSKSAISIV 343
R+ G +GDL +E QIL AEF LRH K+ SI+
Sbjct: 282 RM-GSHGDLRPKECQILAAEFYLRHKKNVTSIM 313
>gi|168017078|ref|XP_001761075.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687761|gb|EDQ74142.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/241 (56%), Positives = 176/241 (73%), Gaps = 2/241 (0%)
Query: 111 SNKRWFPYLDRYKCGDVY-LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLS 169
+ +RWFPY D +K D L SSEV+ LSP+L +ERK+R VV NR+YS+C+ VEGL
Sbjct: 2 TTQRWFPYEDCFKLDDERSLRSSEVLSMLSPFLGDERKQRIEEVVANRTYSICIAVEGLL 61
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNVSA RSADALG QSVHV+S ++ KRY++NR VSMG EKWLD ELW +C + L
Sbjct: 62 DLGNVSAVCRSADALGFQSVHVISNETKKRYKKNRKVSMGTEKWLDAELWSNTSDCIDTL 121
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
R RGYRIA TH+ D +S+YDMDW+ PTA+ GNE G S+EA+ SD+RC IPM GMV+
Sbjct: 122 RQRGYRIAVTHIAPDTVSIYDMDWTIPTAVFFGNEFMGASEEAIKQSDVRCCIPMAGMVE 181
Query: 290 SFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
SFN+SVAAGI+MHHA DR R G +GD++ E+++IL AEF LRH++ + ++ ++
Sbjct: 182 SFNISVAAGIIMHHAARDRIIR-SGVHGDISPEDRRILEAEFCLRHNRHTVPLLDRLLEK 240
Query: 350 K 350
K
Sbjct: 241 K 241
>gi|302817646|ref|XP_002990498.1| hypothetical protein SELMODRAFT_131805 [Selaginella moellendorffii]
gi|300141666|gb|EFJ08375.1| hypothetical protein SELMODRAFT_131805 [Selaginella moellendorffii]
Length = 264
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/251 (50%), Positives = 179/251 (71%), Gaps = 2/251 (0%)
Query: 101 NDGVGSMESLSNKRWFPYLDRYKCGD-VYLSSSEVVEALSPYLMEERKERFVNVVKNRSY 159
+D G + + K WFPY D + + +SS V+ L P +RK++F ++ NR++
Sbjct: 11 SDFAGGLPDPARKCWFPYKDEFNLDEQTRISSEMVIGTLDPMFAADRKQKFDQIIANRTF 70
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
S+C VVEGL D GN+ A FR+A+A G+QSVHV++ KRY+E R++SMGAEKWLD+E+W
Sbjct: 71 SICPVVEGLFDIGNICAVFRTAEAFGLQSVHVIANSDQKRYKEARNISMGAEKWLDVEVW 130
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ EC VLR RGYRIA T +G D + ++++DW+ PTA++ GNE+ G S+EAL+L+D++
Sbjct: 131 ENTNECVQVLRKRGYRIAVTDMGADTVPIHELDWTIPTAVIFGNEHNGTSEEALALADVK 190
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSA 339
C IPM GMVDSFNVSVAAGILM+H V DR R G +GDL+SEE+QIL AEF LR+ ++
Sbjct: 191 CHIPMVGMVDSFNVSVAAGILMYHVVGDRLER-TGIHGDLSSEEQQILRAEFYLRNKRNV 249
Query: 340 ISIVHEYAKRK 350
+V+ K++
Sbjct: 250 KDVVNHLLKKE 260
>gi|302804009|ref|XP_002983757.1| hypothetical protein SELMODRAFT_119049 [Selaginella moellendorffii]
gi|300148594|gb|EFJ15253.1| hypothetical protein SELMODRAFT_119049 [Selaginella moellendorffii]
Length = 264
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/251 (50%), Positives = 180/251 (71%), Gaps = 2/251 (0%)
Query: 101 NDGVGSMESLSNKRWFPYLDRYKCGD-VYLSSSEVVEALSPYLMEERKERFVNVVKNRSY 159
+D G + + K WFPY D + + +SS V+ L P +RK++F ++ NR++
Sbjct: 11 SDFAGGLPDPARKCWFPYKDEFNLDEQTRISSEMVIGTLDPMFAADRKQKFDQIIANRTF 70
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
S+C VVEGL D GN+ A FR+A+A G+QSVHV++ KRY+E R++SMGAEKWLD+E+W
Sbjct: 71 SICPVVEGLFDIGNICAVFRTAEAFGLQSVHVIANSDQKRYKEARNISMGAEKWLDVEVW 130
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ EC VLRSRGYRIA T +G D + ++++DW+ PTA++ GNE+ G S+EAL+L+D++
Sbjct: 131 ENTNECVQVLRSRGYRIAVTDMGADTVPIHELDWTIPTAVIFGNEHNGTSEEALALADVK 190
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSA 339
C IPM GMV+SFNVSVAAGILM+H V DR R G +GDL+SEE+QIL AEF LR+ ++
Sbjct: 191 CHIPMVGMVESFNVSVAAGILMYHIVGDRLER-TGIHGDLSSEEQQILRAEFYLRNKRNV 249
Query: 340 ISIVHEYAKRK 350
+V+ K++
Sbjct: 250 KDVVNHLLKKE 260
>gi|168061044|ref|XP_001782501.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665986|gb|EDQ52653.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 222
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 166/223 (74%), Gaps = 2/223 (0%)
Query: 114 RWFPYLDRYKCGD-VYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFG 172
RWFPY D +K D ++SSE++ LSP++ +ERK+R VV NR+YSVC+ VEGL + G
Sbjct: 1 RWFPYGDCFKLDDEKTVTSSELISMLSPFISDERKQRIERVVANRTYSVCIAVEGLLELG 60
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
N+SA FRSADALG QSVHV+S ++ KRY++NR VS G+E WLD E+W+ +C LR R
Sbjct: 61 NISAVFRSADALGFQSVHVISTETKKRYKKNRKVSRGSETWLDAEMWENSSDCIATLRKR 120
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
GYRIA TH+ + +S+ DMDW+ PTA++ GNE +G S+EA+ SD+RC IPM GMV+SFN
Sbjct: 121 GYRIAVTHIAPNTVSIQDMDWTIPTAVIFGNEYKGASEEAVKQSDIRCCIPMGGMVESFN 180
Query: 293 VSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRH 335
VSVAAGI+MHHA DR R G +GD+ + ++IL AEF +RH
Sbjct: 181 VSVAAGIIMHHAAHDRIIR-SGTHGDIPPQHRKILEAEFYMRH 222
>gi|449494819|ref|XP_004159655.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
[Cucumis sativus]
Length = 182
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/151 (81%), Positives = 139/151 (92%), Gaps = 1/151 (0%)
Query: 200 YRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
YRENRHVSMGAEKWLDIELW++ ECF +L+SRGYRI +TH+G +A+SVYDMDWSCPTAI
Sbjct: 22 YRENRHVSMGAEKWLDIELWNSTPECFKILKSRGYRIVSTHLGANAVSVYDMDWSCPTAI 81
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDL 319
VVGNE+RG+S+EAL LSDL CSIPM GMVDSFNVSVAAGILMHHAVC+R +RL GC+GDL
Sbjct: 82 VVGNESRGISNEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVCNRTSRL-GCHGDL 140
Query: 320 TSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
TSEE+QILLAEFSLRHSKSAISI +E AKRK
Sbjct: 141 TSEERQILLAEFSLRHSKSAISIANELAKRK 171
>gi|356567078|ref|XP_003551750.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
[Glycine max]
Length = 184
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/154 (77%), Positives = 135/154 (87%), Gaps = 1/154 (0%)
Query: 200 YRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
Y++NRHVSMGAEKWLDIELWD+ +ECF +L+SRGYRIATTHVGMDA+S+ D+DWS PT I
Sbjct: 30 YKDNRHVSMGAEKWLDIELWDSTKECFKMLKSRGYRIATTHVGMDAVSILDLDWSSPTTI 89
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDL 319
VVGNENRG+SDEAL LSDL CSIPM GMV SFNVSVAAGILMHHAVCDR +R+ G +GD+
Sbjct: 90 VVGNENRGISDEALELSDLHCSIPMAGMVKSFNVSVAAGILMHHAVCDRISRM-GYHGDM 148
Query: 320 TSEEKQILLAEFSLRHSKSAISIVHEYAKRKETT 353
T EE QILLAEF LRHSKS+ISIV +YA RK T
Sbjct: 149 TVEECQILLAEFLLRHSKSSISIVEDYAMRKAVT 182
>gi|302773363|ref|XP_002970099.1| hypothetical protein SELMODRAFT_35012 [Selaginella moellendorffii]
gi|300162610|gb|EFJ29223.1| hypothetical protein SELMODRAFT_35012 [Selaginella moellendorffii]
Length = 240
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/239 (48%), Positives = 163/239 (68%), Gaps = 4/239 (1%)
Query: 115 WFPYLDRY---KCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDF 171
WFPY D + K SS V+ +L+ ++ ++ KERF VV++RSYS C V E L +
Sbjct: 3 WFPYKDEFHLDKPEKQSSSSKVVIASLAEFVEKQMKERFERVVRSRSYSACFVAEALDNA 62
Query: 172 GNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRS 231
GN++A FRSA+A G QSVHV++ + K Y+ R G E+WLD+E+W+ ++C LRS
Sbjct: 63 GNIAAIFRSAEAFGFQSVHVITSLTVKGYKGVRRAHRGTERWLDVEVWNCAKDCIQALRS 122
Query: 232 RGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSF 291
RGYRIA T G D +S+ +MDW+ PTA++ GNE+ G SD + S +D+ C IPM GMVDS
Sbjct: 123 RGYRIAVTSTGHDTVSICEMDWTIPTAVIFGNEHEGASDYSTSEADILCGIPMFGMVDSL 182
Query: 292 NVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
NVSVAAGILM HAVCDR R G +GDL E+++IL+AEF LR+ +++ I + AK++
Sbjct: 183 NVSVAAGILMRHAVCDRIAR-NGIHGDLEPEQQEILMAEFFLRYKRNSADIFSDLAKKR 240
>gi|302807158|ref|XP_002985292.1| hypothetical protein SELMODRAFT_121615 [Selaginella moellendorffii]
gi|300147120|gb|EFJ13786.1| hypothetical protein SELMODRAFT_121615 [Selaginella moellendorffii]
Length = 248
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 162/240 (67%), Gaps = 4/240 (1%)
Query: 115 WFPYLDRYKCGDVYLSSSE---VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDF 171
WFPY D + SS V+ +L+ ++ ++ KERF VV++RSYS C V E L +
Sbjct: 3 WFPYKDEFHLDRQEKQSSSSKVVIASLAEFVEKQMKERFERVVRSRSYSACFVAEALDNA 62
Query: 172 GNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRS 231
GN++A FRSA+A G QSVHV++ + K Y+ R G E+WLD+E+W+ ++C LRS
Sbjct: 63 GNIAAIFRSAEAFGFQSVHVITSLTVKGYKGVRRAHRGTERWLDVEVWNCAKDCIQALRS 122
Query: 232 RGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSF 291
RGYRIA T D +S+ DMDW+ PTA++ GNE+ G SD + S +D+ C IPM GMVDS
Sbjct: 123 RGYRIAVTSTSHDTVSICDMDWTIPTAVIFGNEHEGASDYSTSQADILCGIPMFGMVDSL 182
Query: 292 NVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
NVSVAAGILM HAVCDR R G +GDL E+++IL+AEF LR+ +++ I + AK+++
Sbjct: 183 NVSVAAGILMRHAVCDRIAR-NGFHGDLEPEQQEILMAEFFLRYKRNSADIFSDLAKKRQ 241
>gi|414887445|tpg|DAA63459.1| TPA: hypothetical protein ZEAMMB73_227248, partial [Zea mays]
Length = 258
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 135/193 (69%), Gaps = 21/193 (10%)
Query: 67 DDENDTPSKDNVEKLL-TNPDD----------VTQFMKMERSCMVNDGVGSMESLSNKRW 115
DDE+ D VE+LL P + + + MK++R G +RW
Sbjct: 52 DDEDGV---DTVEQLLHPRPPETSAPAGSRGRIDRLMKLQRRAD-----GDAVPGGRRRW 103
Query: 116 FPYLDRYK--CGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGN 173
FPYLD ++ G LSS EV++ L P+++E R++R V NRSY+VCLVVEGLSDFGN
Sbjct: 104 FPYLDAFRPAAGGAELSSGEVIDVLEPHILEARRDRIRQAVGNRSYAVCLVVEGLSDFGN 163
Query: 174 VSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRG 233
VSA FRSADALGVQSVHV+SCDSSKRYR+NRHVSMGAEKWLDIE+W++P ECF+ L+ RG
Sbjct: 164 VSAAFRSADALGVQSVHVISCDSSKRYRDNRHVSMGAEKWLDIEIWNSPAECFSALKKRG 223
Query: 234 YRIATTHVGMDAI 246
YRIATT++G D++
Sbjct: 224 YRIATTYLGTDSV 236
>gi|294506881|ref|YP_003570939.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Salinibacter ruber
M8]
gi|294343209|emb|CBH23987.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Salinibacter ruber
M8]
Length = 258
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 120 DRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFR 179
D + GDV LS +V L P++ E R +R VV NR+ SV VVEGL + GNVSA R
Sbjct: 27 DPFTIGDVRLSPERIVGLLRPHMRERRLDRIQTVVANRTRSVVPVVEGLVNTGNVSAVMR 86
Query: 180 SADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATT 239
SA+ALG Q +HVVS + RY+ ++ + GA+ WLD+ WDAP C L+ GYR+
Sbjct: 87 SAEALGHQDMHVVSGEHD-RYKHSQRTAQGAQHWLDVWHWDAPTACATHLQDAGYRVVAM 145
Query: 240 HVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGI 299
H+ D + + D+D++ PTA+V GNE+ GV+D L SD C +P+ G +SFNVSVAA +
Sbjct: 146 HLHADTVPIRDLDFTQPTALVFGNEDAGVTDTMLEASDAACEVPLPGFTESFNVSVAAAV 205
Query: 300 LMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIV 343
++HA DR R G + DL+ E + L A F LR +A I+
Sbjct: 206 ALYHAQQDRLDRQ-GHHADLSDEARARLEARFCLRSVNNAEQII 248
>gi|83815313|ref|YP_445016.1| rRNA methylase [Salinibacter ruber DSM 13855]
gi|83756707|gb|ABC44820.1| rRNA methylase [Salinibacter ruber DSM 13855]
Length = 247
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 137/224 (61%), Gaps = 2/224 (0%)
Query: 120 DRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFR 179
D + GDV LS +V L P++ E R +R VV NR+ SV VVEGL + GNVSA R
Sbjct: 16 DPFTIGDVRLSPERIVGLLRPHMRERRLDRIQTVVANRTRSVVPVVEGLVNTGNVSAVMR 75
Query: 180 SADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATT 239
SA+ALG Q +HVVS + RY+ ++ + GA+ WLD+ WDAP C L+ GYR+
Sbjct: 76 SAEALGHQDMHVVSGEHD-RYKHSQRTAQGAQHWLDVWHWDAPTACATHLQDAGYRVVAM 134
Query: 240 HVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGI 299
H+ D + + D+D++ PTA+V GNE+ GV+D L SD C +P+ G +SFNVSVAA +
Sbjct: 135 HLHADTVPIRDLDFTQPTALVFGNEDAGVTDTMLEASDAACEVPLPGFTESFNVSVAAAV 194
Query: 300 LMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIV 343
++HA DR R G + DL+ E + L A F LR +A I+
Sbjct: 195 ALYHAQQDRLDRQ-GHHADLSDEARARLEARFCLRSVNNAEQII 237
>gi|302848864|ref|XP_002955963.1| hypothetical protein VOLCADRAFT_109989 [Volvox carteri f.
nagariensis]
gi|300258689|gb|EFJ42923.1| hypothetical protein VOLCADRAFT_109989 [Volvox carteri f.
nagariensis]
Length = 312
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 154/235 (65%), Gaps = 3/235 (1%)
Query: 116 FPYLDRYKCGD-VYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNV 174
FPY + + D + ++ VV L+P+ +EER +R +VV+NR++SV +VEGL D GN+
Sbjct: 46 FPYSNEFVLEDGKVVDAATVVRLLAPFALEERVQRIESVVQNRTFSVLPIVEGLYDMGNL 105
Query: 175 SATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGY 234
+A R+ADALG +VH ++ K Y+ ++ + GA+KWLD+++WD+ EC +RS GY
Sbjct: 106 AAVCRTADALGYGAVHCINRGDVK-YKVSQRTAAGADKWLDVKMWDSTAECLAAVRSAGY 164
Query: 235 RIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
+I TTH+ AI++ ++DW+ PTA ++GNE GVS+EA++ +D IPM GMV+SFN+S
Sbjct: 165 QIITTHLSQSAITIEEVDWTRPTAFILGNEKFGVSEEAVAAADACAIIPMTGMVESFNIS 224
Query: 295 VAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
VA+ ++M+ A R R+ G + DL+ EE+ L A + K + +++ E R
Sbjct: 225 VASALIMYEARQQRLRRM-GTHADLSGEERMALKAVMLSKTVKESKTVLSELLSR 278
>gi|159490732|ref|XP_001703327.1| RNA methylase-like protein CR004 [Chlamydomonas reinhardtii]
gi|28207743|gb|AAO32614.1| CR004 protein [Chlamydomonas reinhardtii]
gi|158280251|gb|EDP06009.1| RNA methylase-like protein CR004 [Chlamydomonas reinhardtii]
Length = 316
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 154/249 (61%), Gaps = 3/249 (1%)
Query: 106 SMESLSNKR-WFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLV 164
S+E +S + FPY + + + ++ V L P+ +EER +R VV R+++V +
Sbjct: 36 SLEPVSTRDVGFPYSNDFIVDGKVVDAATVCRLLEPFALEERVKRIEEVVAKRTFTVLPI 95
Query: 165 VEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRE 224
VEGL D GN++A R+ADALG +VH V+ + +++ ++ + GA+KWLD++ WD+ E
Sbjct: 96 VEGLYDMGNLAAVCRTADALGYGAVHAVN-KADGKFKMSQRTAAGADKWLDVKAWDSTGE 154
Query: 225 CFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPM 284
C +++ GY+I TTH+ +I++ ++DW+ PTA+V+GNE GVS EA++ +D IPM
Sbjct: 155 CLAAMKAAGYQIVTTHLTQSSITIQEVDWTRPTAVVLGNEKFGVSAEAVAAADACAIIPM 214
Query: 285 KGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVH 344
GMV+SFN+SVA ++++ A R RL G + DL+ +++ L A + K + S++
Sbjct: 215 TGMVESFNISVANALILYEAQQQRIRRL-GSHADLSPDQQMALKAVMLTKTVKESQSVLS 273
Query: 345 EYAKRKETT 353
E R T
Sbjct: 274 ELLSRPVPT 282
>gi|268318179|ref|YP_003291898.1| tRNA/rRNA methyltransferase SpoU [Rhodothermus marinus DSM 4252]
gi|262335713|gb|ACY49510.1| tRNA/rRNA methyltransferase (SpoU) [Rhodothermus marinus DSM 4252]
Length = 259
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 131/221 (59%), Gaps = 3/221 (1%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
+S +V L PYL E R++R V+ R+Y+V VVEGL++ GNVSA RSA+ALG Q
Sbjct: 39 VSPDVIVAWLQPYLTERRRQRIEQVLDGRTYTVVPVVEGLANTGNVSAVMRSAEALGYQG 98
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
++ K Y+ + + GA+KWLD+ W E L++ GYRI T + +A +
Sbjct: 99 FGIIKGQVQK-YKTSERTAQGADKWLDVWTWPTAAEAVPALKAAGYRIVATAL-EEAEPI 156
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D++ PTA+V GNE GVS E L+++D RC IP+ G SFN+SVAA I ++HA DR
Sbjct: 157 DTFDFTVPTALVFGNEVEGVSRELLAMADARCVIPIVGFTQSFNISVAAAIALYHAQRDR 216
Query: 309 ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
R G +GDL+ E K L A F LR + A ++ E +R
Sbjct: 217 LARR-GRHGDLSPEWKATLRAVFYLRSVQKAGVLLWERLQR 256
>gi|345304477|ref|YP_004826379.1| tRNA/rRNA methyltransferase SpoU [Rhodothermus marinus
SG0.5JP17-172]
gi|345113710|gb|AEN74542.1| tRNA/rRNA methyltransferase (SpoU) [Rhodothermus marinus
SG0.5JP17-172]
Length = 261
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 132/221 (59%), Gaps = 3/221 (1%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
+S +V L PY+ E R++R V+ R+Y+V VVEGL++ GNVSA RSA+ALG Q
Sbjct: 39 VSPDVIVAWLQPYVTERRRQRIEQVLDGRTYTVVPVVEGLANTGNVSAVMRSAEALGYQG 98
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
++ K Y+ + + GA+KWLD+ W E L++ GYRI T + +A +
Sbjct: 99 FGIIKGQVQK-YKTSERTTQGADKWLDVWTWPTAAEAVPALKAAGYRIVATAL-EEADPI 156
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D++ PTA+V GNE GVS E L+++D RC IP+ G SFN+SVAA I ++HA DR
Sbjct: 157 DTFDFTVPTALVFGNEVEGVSRELLAMADARCVIPIVGFTQSFNISVAAAIALYHAQRDR 216
Query: 309 ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
R G +GDL+ E K +L A F LR + A ++ E +R
Sbjct: 217 LARQ-GRHGDLSPEWKAMLRAVFYLRSVQKAGVLLWERLQR 256
>gi|307109015|gb|EFN57254.1| hypothetical protein CHLNCDRAFT_21737 [Chlorella variabilis]
Length = 201
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 119/176 (67%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
+S +VV+ L+P + ++R +R V R+++V +VE + D GN++A RSADALG +
Sbjct: 17 ISGQQVVDTLTPLMTQDRIQRIERVCAARTFNVLPIVESIYDMGNLAAVCRSADALGFGA 76
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
+HV+ +RY+++ + GA+KWLD++++++ EC + GY++ TH+ DA+ +
Sbjct: 77 LHVIRNTRDERYKQSTRSAAGADKWLDVQVFNSTEECVLNAKRLGYQVVATHLSPDAVDI 136
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+DW+ PTA ++GNE RGVS EA++L+D +PM G VDS+N+SVAA ++M+ A
Sbjct: 137 SQIDWTRPTAFIMGNEKRGVSCEAVALADACAVVPMVGFVDSYNLSVAAALIMYEA 192
>gi|255078650|ref|XP_002502905.1| predicted protein [Micromonas sp. RCC299]
gi|226518171|gb|ACO64163.1| predicted protein [Micromonas sp. RCC299]
Length = 234
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 132/220 (60%), Gaps = 4/220 (1%)
Query: 116 FPYLDRYKCGDVYLSSSE-VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNV 174
FPYL C D ++E + A P + EER R VV+ RS+ + ++EG+ D GNV
Sbjct: 1 FPYLHDSFCFDGKECTTEGLTRAFEPQVSEERIARLDAVVQQRSFDLMPILEGVYDIGNV 60
Query: 175 SATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGY 234
A RS +ALG+ S+ V+S D+ ++++ S GA KW ++E W + E +++RGY
Sbjct: 61 LAVCRSTEALGIGSLGVIS-DAGLAFKQSGRTSGGAVKWTNLEQWRSTEEAIREVKARGY 119
Query: 235 RIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
R+ TT V + DW+ PTA+++GNE GVSDEA L+D I M G +S NVS
Sbjct: 120 RVLTT-VFEGGHPLEHYDWTVPTAVILGNERDGVSDEAKRLADGGVYISMNGFTESLNVS 178
Query: 295 VAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLR 334
VA+ ++MHHAV DR TR +G +G+L+ EK+ L A + R
Sbjct: 179 VASSMIMHHAVQDR-TRRLGSHGNLSEREKETLRAVYLAR 217
>gi|145353351|ref|XP_001420979.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357416|ref|XP_001422915.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581215|gb|ABO99272.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583159|gb|ABP01274.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 216
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 5/213 (2%)
Query: 116 FPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVS 175
FPY D + + +V + + EER+ R NV+++RS+S+ ++EG+ D GN+
Sbjct: 1 FPYGDGFAFARATCETETMVALATAMVGEERRMRLENVLEHRSFSLLPILEGVYDVGNIL 60
Query: 176 ATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYR 235
A R+ +ALG+ +VS ++ + S GA KW +E ++ V +++GYR
Sbjct: 61 AVCRTTEALGIGCASIVSSKGLS-FKASGRTSGGALKWQHVEQFETSERALRVAKAKGYR 119
Query: 236 IATTHV-GMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
+ TT G +S YD W+ PTA+V GNE GVSDEA +L D IPM G +S N+S
Sbjct: 120 VLTTEFDGAQPLSHYD--WTVPTAVVFGNEREGVSDEARALRDGAVYIPMFGFTESLNIS 177
Query: 295 VAAGILMHHAVCDRATRLVGCNGDLTSEEKQIL 327
VAA ++M HAV DR R G +GDLT EEK+IL
Sbjct: 178 VAAALVMSHAVTDRINRR-GFHGDLTEEEKRIL 209
>gi|42522737|ref|NP_968117.1| RNA methylase [Bdellovibrio bacteriovorus HD100]
gi|39573933|emb|CAE79110.1| putative RNA methylase [Bdellovibrio bacteriovorus HD100]
Length = 238
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 141/236 (59%), Gaps = 4/236 (1%)
Query: 115 WFPYLDRYKC-GDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGN 173
FPY + ++ ++ V+E + P L +ER+++ VV R++ +V+EG+ D GN
Sbjct: 1 MFPYGPELEINANLRVNYQLVLEKIGPLLTDERRQKIEKVVALRNFDTAVVLEGIYDRGN 60
Query: 174 VSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRG 233
+SA RSA+ LG + HV+ ++ ++++E V+ GA+KW++++ W +C L+++G
Sbjct: 61 ISAVMRSAEGLGFGNFHVI--ETQEKFKEANRVTQGADKWVEVKKWKKTADCVKALKNQG 118
Query: 234 YRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNV 293
Y+I TH+ +A ++++D+S TA+V+GNE GV+ E ++ +D IPM G V SFN+
Sbjct: 119 YKIYVTHLDANAKPLHEIDFSGKTALVLGNERDGVTPEMIAAADQTIIIPMTGFVQSFNI 178
Query: 294 SVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
SVA + ++H DR R G N LT EE+ IL A + +R SA + E R
Sbjct: 179 SVAGALGLYHISQDRLKRR-GTNASLTEEEQGILRAHYYMRTQDSAAQYLEEMFSR 233
>gi|220919411|ref|YP_002494715.1| tRNA/rRNA methyltransferase SpoU [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957265|gb|ACL67649.1| tRNA/rRNA methyltransferase (SpoU) [Anaeromyxobacter dehalogenans
2CP-1]
Length = 225
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
+++ ER+ R VV NR+ ++ +V+E D NV+A R+ +A GVQ++H + K Y
Sbjct: 8 FVLPERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGVQTLHAIE-GPMKPY 66
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
N+ +S A+KWLD+ W + EC LRS G+ I TH+G + + + ++ A+V
Sbjct: 67 DRNKKISQNADKWLDVRRWSSTAECLAHLRSEGFAIYATHLGERSTPMAGLSFAGKVALV 126
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLT 320
GNE RGVS+EAL+L+D +IPM+G V S NVSVAA I + HAV R G +GDL
Sbjct: 127 FGNEQRGVSEEALALADACYAIPMRGFVQSLNVSVAAAISLAHAVERREVER-GRHGDLP 185
Query: 321 SEEKQILLAEFSL 333
+E Q+L F L
Sbjct: 186 EDEAQVLRERFYL 198
>gi|426403175|ref|YP_007022146.1| RNA methylase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425859843|gb|AFY00879.1| putative RNA methylase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 236
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 141/236 (59%), Gaps = 4/236 (1%)
Query: 115 WFPYLDRYKC-GDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGN 173
FPY + ++ ++ V+E + P L +ER+++ VV R++ +V+EG+ D GN
Sbjct: 1 MFPYGPELEINANLRVNYQLVLEKIGPLLTDERRQKIEKVVALRNFDTAVVLEGIYDRGN 60
Query: 174 VSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRG 233
+SA RSA+ LG + HV+ ++ ++++E V+ GA+KW++++ W +C L+++G
Sbjct: 61 ISAVMRSAEGLGFGNFHVI--ETQEKFKEANRVTQGADKWVEVKKWKKTADCVKALKNQG 118
Query: 234 YRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNV 293
Y+I TH+ +A ++++D+S +A+V+GNE GV+ E ++ +D IPM G V SFN+
Sbjct: 119 YKIYVTHLDANAKPLHEIDFSGKSALVLGNERDGVTPEMIAAADQTIIIPMTGFVQSFNI 178
Query: 294 SVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
SVA + ++H DR R G N LT EE+ IL A + +R SA + E R
Sbjct: 179 SVAGALGLYHISQDRLNRR-GTNASLTDEEQGILRAHYYMRTQDSAAQYLEEMFSR 233
>gi|326437534|gb|EGD83104.1| hypothetical protein PTSG_12070 [Salpingoeca sp. ATCC 50818]
Length = 717
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 125/236 (52%), Gaps = 12/236 (5%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
+E V L P + ER R + V + R + V+EGL D GN+SA R+ DA GV H
Sbjct: 3 AEAVAQLRPLVTPERFSRAIAVARGRVQGLACVIEGLHDTGNISAIQRTCDAFGVHDFHT 62
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAIS---- 247
+ R +++RHVS GA+KWL + W + +C LR GYRIA T V D+ S
Sbjct: 63 IRRFPMDRMKQHRHVSKGADKWLRVHRWGSTGDCMAHLRQHGYRIAVTAVADDSSSNHAS 122
Query: 248 ---VYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
++ ++ PTA V GNE G+S +AL +D+ IP+ G V + NVSVAAG ++HHA
Sbjct: 123 VTDLHALELDQPTAFVFGNEVAGISTQALEEADVLVQIPLVGFVSALNVSVAAGCVLHHA 182
Query: 305 VCDRATRLVGCNGDLTSEEKQI--LLAEFSLRH--SKSAISIVHEYAKRKETTHMP 356
R R G +G + SE++ + + E LR K A V++ +T P
Sbjct: 183 TLQR-RRFQGDDGGVISEDEALARMTTELLLRSLGEKDAADAVNDAIHDAASTRSP 237
>gi|86160595|ref|YP_467380.1| tRNA/rRNA methyltransferase SpoU [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777106|gb|ABC83943.1| tRNA/rRNA methyltransferase, SpoU [Anaeromyxobacter dehalogenans
2CP-C]
Length = 225
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
+++ ER+ R VV NR+ ++ +V+E D NV+A R+ +A G+Q++H V K Y
Sbjct: 8 FVLPERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGIQTLHAVE-GPMKPY 66
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
N+ +S A+KWLD+ W + EC LRS G+ I TH+G + + + ++ A+V
Sbjct: 67 DRNKKISQNADKWLDVRRWSSTAECLAHLRSEGFAIYATHLGERSTPMAGLSFAGKVALV 126
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLT 320
GNE RGVS+EAL+++D +IPM+G V S NVSVAA I + HAV R G +GDL
Sbjct: 127 FGNEQRGVSEEALAVADACYAIPMRGFVQSLNVSVAAAISLAHAVERREVER-GRHGDLP 185
Query: 321 SEEKQILLAEFSL 333
+E Q+L F L
Sbjct: 186 DDEAQVLRERFYL 198
>gi|197124691|ref|YP_002136642.1| tRNA/rRNA methyltransferase SpoU [Anaeromyxobacter sp. K]
gi|196174540|gb|ACG75513.1| tRNA/rRNA methyltransferase (SpoU) [Anaeromyxobacter sp. K]
Length = 225
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
+++ ER+ R VV NR+ ++ +V+E D NV+A R+ +A GVQ++H + K Y
Sbjct: 8 FVLPERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGVQTLHAIE-GPMKPY 66
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
N+ +S A+KWLD+ W + EC LR+ G+ + TH+G + + + ++ A+V
Sbjct: 67 DRNKKISQNADKWLDVRRWSSTTECLAHLRAEGFAVYATHLGERSRPMAGLSFAGKVALV 126
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLT 320
GNE RGVS+EAL+L+D +IPM+G V S NVSVAA I + HAV R G +GDL
Sbjct: 127 FGNEQRGVSEEALALADACYAIPMRGFVQSLNVSVAAAISLAHAVERREVER-GRHGDLP 185
Query: 321 SEEKQILLAEFSL 333
+E Q+L F L
Sbjct: 186 EDEAQVLRERFYL 198
>gi|196006305|ref|XP_002113019.1| hypothetical protein TRIADDRAFT_56739 [Trichoplax adhaerens]
gi|190585060|gb|EDV25129.1| hypothetical protein TRIADDRAFT_56739 [Trichoplax adhaerens]
Length = 246
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 6/205 (2%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E+++ L+ +ER ++ N VKNR+ S+ +V+EG+++ GN A +R+ DALG Q+ H +
Sbjct: 41 ELLQKLTCAFTKERLDKMTNAVKNRTRSIAVVLEGITNEGNEQAIYRTMDALGFQTAHRI 100
Query: 193 SCDSSKRYRENR--HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD 250
S YR GA KW+DIE W + EC + L+S GY+I T ++
Sbjct: 101 P---SPLYRLKTCGRTDAGAMKWIDIESWKSTEECISQLKSCGYKILATSSENKTKTLDS 157
Query: 251 MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
D+S TA+V+G+E G+S EA++L D I M G V+S+NVSVAA I+++H DR
Sbjct: 158 FDFSNKTAVVLGSEQEGISKEAMNLVDNVFRISMVGFVESYNVSVAAAIILYHIYQDRIR 217
Query: 311 RLVGCNGDLTSEEKQILLAEFSLRH 335
+L G +GDLT E+ LL ++ L+
Sbjct: 218 KL-GYHGDLTEAEQDDLLLQYMLKE 241
>gi|303283456|ref|XP_003061019.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457370|gb|EEH54669.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 219
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 4/220 (1%)
Query: 116 FPYLDRYKCGDVYLSSSE-VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNV 174
FPY C D +S E + A +P + +R R VV+ RS+ + ++EG D GNV
Sbjct: 3 FPYEHDTFCFDGLDASLEDLTRAFTPVISPDRLARLDAVVEQRSFDILPILEGAYDIGNV 62
Query: 175 SATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGY 234
A RS +ALG+ ++ VVS D+ +++++ S GA KW ++ W + + + RGY
Sbjct: 63 LAVCRSTEALGIGTLGVVS-DTGLKFKQSGRTSGGAVKWTHLQQWRSTADAVRDAKKRGY 121
Query: 235 RIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
R+ TT V + DW+ PTA+++GNE GVS+EA L+D + M G +S NVS
Sbjct: 122 RVLTT-VFEGGHPLEHYDWTVPTAVILGNEREGVSEEAKKLADGGVYVSMNGFTESLNVS 180
Query: 295 VAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLR 334
VA+ ++MHHAV DR TR G +G LT EK+ L + R
Sbjct: 181 VASSLVMHHAVQDR-TRRAGKHGSLTEREKETLRGVYLAR 219
>gi|308810773|ref|XP_003082695.1| CR004 protein (ISS) [Ostreococcus tauri]
gi|116061164|emb|CAL56552.1| CR004 protein (ISS) [Ostreococcus tauri]
Length = 308
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 6/214 (2%)
Query: 116 FPYLDRYK-CGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNV 174
FPY ++ G +SE++ + R R NV+ NR++ + V+EG+ D GN+
Sbjct: 22 FPYDFGFEFAGGTTCGTSEMISMALETASDGRMARLENVLANRTFDLLPVMEGVYDVGNM 81
Query: 175 SATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGY 234
A RS +ALG+ +VS ++ + S GA KW +E +D+ +SRG
Sbjct: 82 LAVCRSTEALGIGCAAIVSS-KGLNFKASGRTSGGALKWQRVERFDSTTAALRAAKSRGM 140
Query: 235 RIATTHV-GMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNV 293
R+ TT G +S YD W+ PTA+V GNE GVS+EA ++SD IPM G +S N+
Sbjct: 141 RVLTTEFEGAYPMSHYD--WTIPTAVVFGNEKTGVSEEARAMSDGGVFIPMYGFTESLNI 198
Query: 294 SVAAGILMHHAVCDRATRLVGCNGDLTSEEKQIL 327
SVAA ++M HAV DR R G +GDL+ EEK+IL
Sbjct: 199 SVAAALVMSHAVSDRIARR-GFHGDLSDEEKEIL 231
>gi|153007162|ref|YP_001381487.1| tRNA/rRNA methyltransferase SpoU [Anaeromyxobacter sp. Fw109-5]
gi|152030735|gb|ABS28503.1| tRNA/rRNA methyltransferase (SpoU) [Anaeromyxobacter sp. Fw109-5]
Length = 239
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 113/191 (59%), Gaps = 2/191 (1%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
+L+ ER+ R VV NR+ ++ +V+E D NV+A R+ +A G+Q +HV+ K Y
Sbjct: 25 FLVPERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGIQELHVIE-GPMKPY 83
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
N+ +S A+KW+D+ W + EC L++ G+ I TH+G A ++ + ++ A+V
Sbjct: 84 DRNKKISQNADKWVDVRRWSSTGECLAHLKAEGFAIYATHLGEGARTLDALSFAGKVALV 143
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLT 320
GNE+RGVSDEA++LSD IPM G V S NVSVAA I + AV RA G +GDL+
Sbjct: 144 FGNEHRGVSDEAVALSDAVYVIPMHGFVQSLNVSVAAAISIAKAVERRAAER-GRHGDLS 202
Query: 321 SEEKQILLAEF 331
E L F
Sbjct: 203 ELEAAALRERF 213
>gi|414887446|tpg|DAA63460.1| TPA: hypothetical protein ZEAMMB73_227248 [Zea mays]
Length = 198
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 93/148 (62%), Gaps = 21/148 (14%)
Query: 67 DDENDTPSKDNVEKLL-TNPDD----------VTQFMKMERSCMVNDGVGSMESLSNKRW 115
DDE+ D VE+LL P + + + MK++R G +RW
Sbjct: 52 DDEDGV---DTVEQLLHPRPPETSAPAGSRGRIDRLMKLQRRAD-----GDAVPGGRRRW 103
Query: 116 FPYLDRYK--CGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGN 173
FPYLD ++ G LSS EV++ L P+++E R++R V NRSY+VCLVVEGLSDFGN
Sbjct: 104 FPYLDAFRPAAGGAELSSGEVIDVLEPHILEARRDRIRQAVGNRSYAVCLVVEGLSDFGN 163
Query: 174 VSATFRSADALGVQSVHVVSCDSSKRYR 201
VSA FRSADALGVQSVHV+SCDSSKR R
Sbjct: 164 VSAAFRSADALGVQSVHVISCDSSKRCR 191
>gi|335041477|ref|ZP_08534514.1| tRNA/rRNA methyltransferase (SpoU) [Caldalkalibacillus thermarum
TA2.A1]
gi|334178635|gb|EGL81363.1| tRNA/rRNA methyltransferase (SpoU) [Caldalkalibacillus thermarum
TA2.A1]
Length = 256
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L ER +R V+K R+ + +++E + D N +A RSADA GVQ+V +V + +
Sbjct: 30 LRPERLKRMYEVLKQRTRHIAVLLEAVDDGHNQAAVLRSADAFGVQNVSIVVGRAP--FS 87
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
NR V+ A KWL IE + RGY++ +H+G DA+ + ++D S PT +
Sbjct: 88 PNRKVTQSAHKWLTIERQPTIETAIKTAQERGYQVLASHLGADAVPLAELDLSQPTVFLF 147
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GV++EAL ++D IPM G V S N+SVAA I +H A RA LVG LT
Sbjct: 148 GNEHDGVTEEALEMADGNFIIPMYGFVQSLNISVAAAITLHQA-TQRARALVGDAYFLTP 206
Query: 322 EEKQILL 328
+E++ L
Sbjct: 207 QEQKELF 213
>gi|384245332|gb|EIE18826.1| hypothetical protein COCSUDRAFT_59757 [Coccomyxa subellipsoidea
C-169]
Length = 843
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 114/217 (52%), Gaps = 21/217 (9%)
Query: 122 YKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSA 181
+ G SSS ++EAL P ++ ER ER V +R +S+ VVE
Sbjct: 617 FDVGGCEASSSLILEALIPQVLPERLERIQQVASDRCHSILPVVE--------------- 661
Query: 182 DALGVQSVHVV--SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATT 239
ALG +V + S + K R NR S GAEKWLD++ R C LR GYRI T
Sbjct: 662 -ALGFGAVQCIDSSVERVKSARGNR-TSKGAEKWLDVQRTWGTRRCVEYLRDCGYRILVT 719
Query: 240 HVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK-GMVDSFNVSVAAG 298
D++ + +DW+ PTA ++GNE G S EA+ L+D ++PM +SFNVSVAA
Sbjct: 720 QPTADSVPIGAIDWTLPTAFILGNEVNGASAEAIELADQAVTVPMAHSFTESFNVSVAAA 779
Query: 299 ILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRH 335
+++ A R +L C GDL+ EE Q L A L+H
Sbjct: 780 LILSEARRQRLEKLGRC-GDLSPEETQTLTAIMLLKH 815
>gi|298714780|emb|CBJ25679.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 363
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 7/194 (3%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
V+ L YL E+R R +V+ R+ S LV E ++ NV A R+ D+ G+Q H+VS
Sbjct: 128 VDLLKGYLSEDRLSRMEDVLDQRTRSATLVFENPANPNNVWACLRTLDSFGIQHAHIVSD 187
Query: 195 DS--SKRYR-ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
S SK+ R + +MG++KWL + D P + L++ GY++ + + A+ + ++
Sbjct: 188 PSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKTDGYQVVASDLSPSAVPISEI 247
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
DWS PTA+V+GNE RG+SD ++D IPM+G V SFN+SVA I++ H RA +
Sbjct: 248 DWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALK 307
Query: 312 LVGCNGDLTSEEKQ 325
+GDL +E++
Sbjct: 308 ----HGDLPEDERR 317
>gi|56421995|ref|YP_149313.1| rRNA methylase [Geobacillus kaustophilus HTA426]
gi|375010641|ref|YP_004984274.1| tRNA/rRNA methyltransferase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|56381837|dbj|BAD77745.1| rRNA methylase [Geobacillus kaustophilus HTA426]
gi|359289490|gb|AEV21174.1| tRNA/rRNA methyltransferase [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 247
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R R V+ R+ + +++E + D N +A R+A+A GVQ VH+V+ + +
Sbjct: 30 ILPRRLRRMYEVLNERTRYITVLIEAVDDPHNQAAVLRTAEAFGVQDVHIVTGKAP--FS 87
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
NR V+ A++WL + + L+S+GY++ +++G + I V D+D S PTA++
Sbjct: 88 PNRLVTRYADQWLTLHHKPDIKTAIADLKSQGYQVYASYLGEETIPVSDIDLSQPTALLF 147
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GVS+EAL L+D IPM G V SFN+SVAA + ++ V +RA R G + L
Sbjct: 148 GNEHSGVSEEALRLADGTFVIPMYGFVQSFNISVAAALALYD-VTERARRQAGRHYYLLP 206
Query: 322 EEKQILLAEF 331
EEK+ L ++
Sbjct: 207 EEKKALYEQW 216
>gi|163755356|ref|ZP_02162476.1| tRNA/rRNA methyltransferase (SpoU) [Kordia algicida OT-1]
gi|161324776|gb|EDP96105.1| tRNA/rRNA methyltransferase (SpoU) [Kordia algicida OT-1]
Length = 218
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 8/216 (3%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
++E L YL E RKE F+ V+ R+ + VE + N SA RS D G+Q VHV+
Sbjct: 5 LLEHLEGYLTERRKELFIKVLSKRTRHFTVAVEDVYQMHNTSAVLRSCDVFGIQDVHVIE 64
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
K+ +R ++MGA+KW+DI ++ ++C + L+ +GYRI T D+ ++D D
Sbjct: 65 ARLGKKM--DREIAMGAQKWVDIHRYNDTQQCIDTLKKQGYRIIATTPHEDSQYLHDFDI 122
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
+ A G E G+S+E LS +D IPM G +S N+SV+A I + T+L
Sbjct: 123 TQKAAFFFGKEKEGLSEEVLSQADEFLKIPMVGFTESLNISVSAAITIQEV----TTKLR 178
Query: 314 GCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
+ E+++L F K +I + + KR
Sbjct: 179 NSDIPWQFTEEEVLAKRFDW--CKKSIKSIEDILKR 212
>gi|442318502|ref|YP_007358523.1| tRNA (guanosine-2'-O-)-methyltransferase [Myxococcus stipitatus DSM
14675]
gi|441486144|gb|AGC42839.1| tRNA (guanosine-2'-O-)-methyltransferase [Myxococcus stipitatus DSM
14675]
Length = 226
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
+L++ RKE+ VV R+ + +V++ L D N++A R+ +++GVQ VHVV + +
Sbjct: 21 FLLDVRKEKIDRVVSQRTRNFTVVLDRLEDSFNMAAVLRTCESMGVQEVHVV-INPEAPF 79
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
N V+ G +KWLD++L+ + EC L+SRG+++ + + A S+Y + + AIV
Sbjct: 80 LPNSRVAQGCDKWLDVKLYKSFAECREHLKSRGFQLYASAIREGATSLYTLRFDTKVAIV 139
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLT 320
+GNE GVSD+ L D IPM+G S N+S AA + A+ R L G +GDL
Sbjct: 140 LGNERFGVSDDVLDAVDGTFWIPMRGFSQSLNISAAASACISRAIAWRDEHLEGGSGDLP 199
Query: 321 SEEKQILLAEF 331
EE Q L F
Sbjct: 200 PEEAQALRERF 210
>gi|399928166|ref|ZP_10785524.1| putative tRNA/rRNA methyltransferase [Myroides injenensis M09-0166]
Length = 226
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E +E L +L E R ERF V+KNR+ + +V E + N SA RS + GVQ + V+
Sbjct: 12 EYLEYLESFLTESRVERFKEVLKNRTRHITIVAEDVYQLHNTSAVMRSCEVFGVQDLRVI 71
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR ++ +++GAEKW+DI ++ + + +R++GY+I T +DA + D D
Sbjct: 72 EQKFGKRI--DKEIALGAEKWVDIHRYNTVQNSIDDIRAQGYQIVATTPHVDAFHLEDFD 129
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
+ P+A+ G E G+S E + +D IPM G +S N+SV+A I++ + R
Sbjct: 130 ITKPSAVFFGTEKSGLSPEIIEQADTYIKIPMVGFTESLNISVSAAIIIQNLTT--RIRH 187
Query: 313 VGCNGDLTSEE 323
N LT EE
Sbjct: 188 SDLNWQLTEEE 198
>gi|374373086|ref|ZP_09630746.1| tRNA/rRNA methyltransferase (SpoU) [Niabella soli DSM 19437]
gi|373234059|gb|EHP53852.1| tRNA/rRNA methyltransferase (SpoU) [Niabella soli DSM 19437]
Length = 192
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 102/168 (60%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ERKE+ NV++ R + +V+E + D N+SA RS DA+G+Q V++++ + +
Sbjct: 1 MTNERKEKLENVIRYRQPGLGIVLENVFDPHNISAVMRSCDAVGIQDVYILNTKIPRHEK 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
S A KWL ++ +D +CF VLRSR I TTH+ DA+S+YDMD + A+V
Sbjct: 61 WGAKSSSSAAKWLSVQQFDNVVDCFGVLRSRYDAIVTTHLSSDAVSLYDMDLTGNIALVF 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
GNE+ GVS+E +L+D IP G++ S N+SVA + ++ A R+
Sbjct: 121 GNEHAGVSEEIRALADGNFIIPQVGIIQSLNISVACAVTIYEAYRQRS 168
>gi|448239732|ref|YP_007403790.1| putative RNA methyltransferase [Geobacillus sp. GHH01]
gi|445208574|gb|AGE24039.1| putative RNA methyltransferase [Geobacillus sp. GHH01]
Length = 247
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R R V+ R+ + +++E + D N +A R+A+A GVQ VH+V+ + +
Sbjct: 30 ILPRRLRRMYEVLNERTRYITVLIEAVDDPHNQAAVLRTAEAFGVQDVHIVTGKAP--FS 87
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
NR V+ A++WL + + L+S+GY++ +++G + I V D+D S PTA++
Sbjct: 88 PNRLVTRYADQWLTLHHKPDIKTAIADLKSQGYQVYASYLGEETIPVSDIDLSQPTALLF 147
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GVS+EAL L+D IPM G V SFN+SVAA + ++ V +RA R G + L
Sbjct: 148 GNEHSGVSEEALRLADGTFVIPMYGFVQSFNISVAAALALYD-VTERARRQAGRHYYLLP 206
Query: 322 EEKQILLAEF 331
EK+ L ++
Sbjct: 207 GEKKALYEQW 216
>gi|340616055|ref|YP_004734508.1| tRNA guanosine-2'-O-methyltransferase [Zobellia galactanivorans]
gi|339730852|emb|CAZ94116.1| tRNA guanosine-2'-O-methyltransferase [Zobellia galactanivorans]
Length = 218
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 10/220 (4%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E++E L ++ EERK+RF+ ++++R+ + + +E + N SA RS + G+Q HV+
Sbjct: 5 ELLEYLENFISEERKQRFLEILEDRTKLLTVAIEDVYQLHNTSAVIRSCEVFGIQEAHVI 64
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR + ++MGA++W+D+ + + EC L+S GY++ T D+ + D +
Sbjct: 65 ESRYGKRLDDK--IAMGAQQWVDVHRYKSTNECIQRLKSDGYKVIATTPHNDSRFLEDFE 122
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH-AVCDRATR 311
TA + G E G+S EA+ SD IPM G +S N+SV+A I++ H AV RAT
Sbjct: 123 IEGKTAFLFGTERTGLSQEAMEQSDGFLKIPMLGFTESLNISVSAAIILQHLAVKLRATD 182
Query: 312 LVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
L D EK+ L +K +I + + KR E
Sbjct: 183 LQWQLSDAEKLEKR-------LDWTKKSIKSIDDILKRYE 215
>gi|149372584|ref|ZP_01891696.1| tRNA/rRNA methyltransferase (SpoU) [unidentified eubacterium SCB49]
gi|149354627|gb|EDM43191.1| tRNA/rRNA methyltransferase (SpoU) [unidentified eubacterium SCB49]
Length = 232
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Query: 128 YLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQ 187
Y+ E++E L +L EER ERF ++ R+ +V E + N SA RS DA G+Q
Sbjct: 10 YILDIELLEYLKGFLTEERMERFEKILSERTKHFTVVTEDVYQIHNTSAVMRSCDAFGIQ 69
Query: 188 SVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAIS 247
+H+V KR ++ ++MGA+KW+ + +C + L+ +GY+I T DA
Sbjct: 70 DLHLVEEKFGKRV--DKEIAMGAQKWVTLHRHSNLEDCVSTLKDKGYQIVATSPHADASY 127
Query: 248 VYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVC 306
++D D++ +AI G E G+++ L +D +PM G +S N+SV+A I+M H V
Sbjct: 128 LHDFDYTKKSAIFFGTEKDGLTEGVLEQADALIKVPMYGFTESLNISVSAAIIMQHLVT 186
>gi|261420869|ref|YP_003254551.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. Y412MC61]
gi|319768540|ref|YP_004134041.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. Y412MC52]
gi|261377326|gb|ACX80069.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. Y412MC61]
gi|300808463|gb|ADK35364.1| Rrm [Geobacillus stearothermophilus]
gi|317113406|gb|ADU95898.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. Y412MC52]
Length = 247
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 3/190 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R R V+ R+ + +++E + D N +A R+A+A GVQ VH+V+ + +
Sbjct: 30 ILPRRLRRMYEVLNERTRYITVLIEAVDDPHNQAAVLRTAEAFGVQDVHIVTGKAP--FS 87
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
NR V+ A++WL + + L+S+GY++ +++G I V D+D S PTA++
Sbjct: 88 PNRLVTRYADQWLTLHHKPDIKTAIADLKSQGYQVYASYLGEGTIPVSDIDLSQPTALLF 147
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GVS+EAL L+D IPM G V SFN+SVAA + ++ V +RA R G + L
Sbjct: 148 GNEHSGVSEEALRLADGTFVIPMYGFVQSFNISVAAALALYD-VTERARRQAGRHYYLLP 206
Query: 322 EEKQILLAEF 331
EK+ L ++
Sbjct: 207 GEKKALYEQW 216
>gi|374289399|ref|YP_005036484.1| tRNA (guanosine-2'-O-)-methyltransferase [Bacteriovorax marinus SJ]
gi|301167940|emb|CBW27526.1| tRNA (guanosine-2'-O-)-methyltransferase [Bacteriovorax marinus SJ]
Length = 249
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L ++RKE ++ R + +++E L D GN+ A R+ D GVQ + ++ ++
Sbjct: 42 LNDQRKELIERILDQRISGLSVILESLGDLGNLQAISRTCDNFGVQKLEIIETKGPMKWT 101
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
NR S GA KW+ ++ W ++C + RG +I +T AI ++D++ PTA+++
Sbjct: 102 -NR-TSQGAHKWVTMQKWYETKDCLQYFKDRGVQIVSTAFSDKAIPYTEVDFTKPTALLM 159
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ G+S+ A +SD+ C IP G S NVSVAA I++ HA G GD
Sbjct: 160 GNESFGISEVAREMSDVECIIPSYGYSQSLNVSVAAAIVIEHATSQIRKAHQG-GGDFNE 218
Query: 322 EEKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+++ + F + ++ + +++ E+ K+K
Sbjct: 219 EQREFFKSFFYFQANQYSRALMREHFKKK 247
>gi|212640614|ref|YP_002317134.1| rRNA methylase [Anoxybacillus flavithermus WK1]
gi|212562094|gb|ACJ35149.1| rRNA methylase [Anoxybacillus flavithermus WK1]
Length = 238
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R +R +V+ R+ + ++ E + D N +A RSA+A G+Q VHVV+ + +
Sbjct: 30 ILPSRLKRMYDVLSERTRYITILTEAVDDPHNQAAVLRSAEAFGIQDVHVVTGAAP--FE 87
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N+ V+ A+KWL++ + + L+ GY++ +++G I + +D S PT ++
Sbjct: 88 PNKWVTRHADKWLNVHKHSSIEQAIRHLQQNGYQVYASYLGEGTIPLEQIDVSKPTVLLF 147
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+RGVS+EAL+L+D + IPM G V SFN+SVAA I ++ + RA ++ G L+
Sbjct: 148 GNEHRGVSEEALALADGKFVIPMNGFVQSFNISVAAAISLYE-ITKRAKQVAGERYHLSL 206
Query: 322 EEKQ 325
EK+
Sbjct: 207 AEKK 210
>gi|297531654|ref|YP_003672929.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. C56-T3]
gi|297254906|gb|ADI28352.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. C56-T3]
Length = 247
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 110/190 (57%), Gaps = 3/190 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R R V+ R+ + +++E + D N +A R+A+A GVQ VH+V+ + +
Sbjct: 30 ILPRRLRRMYEVLNERTRYITVLIEAVDDPHNQAAVLRTAEAFGVQDVHIVTGKAP--FS 87
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
NR V+ A++WL + + L+S+GY++ ++ G I V D+D S PTA++
Sbjct: 88 PNRLVTRYADQWLTLHHKPDIKTAIADLKSQGYQVYASYFGEGTIPVSDIDLSQPTALLF 147
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GVS+EAL L+D IPM G V SFN+SVAA + ++ V +RA R G + L
Sbjct: 148 GNEHSGVSEEALRLADGTFVIPMYGFVQSFNISVAAALALYD-VTERARRQAGRHYYLLP 206
Query: 322 EEKQILLAEF 331
EK+ L ++
Sbjct: 207 GEKKALYEQW 216
>gi|386821080|ref|ZP_10108296.1| rRNA methylase [Joostella marina DSM 19592]
gi|386426186|gb|EIJ40016.1| rRNA methylase [Joostella marina DSM 19592]
Length = 213
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 131 SSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH 190
S E+++ L ++ EERK+RF+ ++ R+ + +E + N SA RS D G+Q+VH
Sbjct: 2 SLELLKYLEGFITEERKKRFIEILAERTNHFTVAIEDVYQLHNTSAVIRSCDVFGIQNVH 61
Query: 191 VVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD 250
+V +R +N ++MG++KW+D ++ +C LR RGY+I T +DA + D
Sbjct: 62 IVEKQFGERLDKN--IAMGSQKWVDTTKYNNVSDCVEALRKRGYQIIATSPHVDANMLQD 119
Query: 251 MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
D+ +A+ G E G++ E + +D IPM G +S N+SV+A I++ D T
Sbjct: 120 FDFYKKSALFFGTEKSGLTPELIKQADGFLKIPMYGFTESLNISVSAAIILQ----DLTT 175
Query: 311 RLVG--CNGDLTSEE 323
+L N LTSEE
Sbjct: 176 KLRSSDINWQLTSEE 190
>gi|372221774|ref|ZP_09500195.1| tRNA/rRNA methyltransferase SpoU [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 218
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
+++ L YL EERK RF+ ++ NR+ + + +E + N SA RS DA GVQ+VHVV
Sbjct: 5 DLLAYLESYLTEERKVRFLEILSNRTNYLTVAIEDVYQLHNTSAVIRSCDAFGVQTVHVV 64
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR +N ++MGA++W+D+E + ++C L+ +GY+I T + + + D +
Sbjct: 65 EDRFGKRLDKN--IAMGAQQWVDVERYANTKDCITQLKQKGYQIWATTPHGNCVDLPDFN 122
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
++ TA+ G E G+S E L +D +PM G +S NVSV A IL+ + D+ R
Sbjct: 123 FTQKTALFFGTERTGLSQEVLDQADGFLKVPMVGFSESLNVSVCAAILV-QVLADKLRR- 180
Query: 313 VGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
L+++E ++S + KS I+ Y K K
Sbjct: 181 SDMPWQLSAQELLDKRLDWSKKSIKSVDLIIDRYLKDK 218
>gi|429750961|ref|ZP_19283943.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429163185|gb|EKY05433.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 220
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 114/213 (53%), Gaps = 4/213 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
+++ L ++ EERK+RF+ ++ R+ + +E + N SA R+ + GVQ H +
Sbjct: 3 LLDYLQNFITEERKQRFLEIISQRTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIE 62
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
KR E ++MGA+KW+D+ +D ++C ++LR +GY+I T DA + D D
Sbjct: 63 GRYGKRLDEK--IAMGAQKWVDVFRYDDTQKCIDILREKGYQIVATTPHKDAYLLNDFDI 120
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
S +A G E G+S++ L+ +D IPM G +S N+SVA I++ + D+ R
Sbjct: 121 SKKSAFFFGTEKEGLSEKVLAQADTYLKIPMVGFTESLNISVAVAIVLQQ-LTDKLRR-S 178
Query: 314 GCNGDLTSEEKQILLAEFSLRHSKSAISIVHEY 346
LT EE+ +L +++ ++ ++ Y
Sbjct: 179 NIKWQLTDEERYSVLEQWTKISVRNVNDVIKRY 211
>gi|412987737|emb|CCO20572.1| tRNA guanosine-2'-O-methyltransferase [Bathycoccus prasinos]
Length = 448
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 10/194 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R V R +SV ++E + D GN A RSA+ALG+ +V VV + ++++
Sbjct: 175 DRIRRVEETVSKRVFSVLPILENVYDTGNFLAVCRSAEALGIGAVGVV-AEKGLVFKQSG 233
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMD-AISVYDMDWS-CPTAIVVG 262
S GA KW I +++ +EC ++ RG+R+ T + A SV + DW+ PTA++ G
Sbjct: 234 RTSGGAVKWQHISQYESTKECIEKVKKRGFRVLVTDFDNEKAKSVGEYDWAEVPTAVIFG 293
Query: 263 NENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC------- 315
NE GVS+ A L+D + +PM G +SFN+SV+A +L++HA DR R+
Sbjct: 294 NELDGVSETAKELADGKVYLPMSGFTESFNLSVSAALLLYHATEDRKKRIASSSSSSHEQ 353
Query: 316 NGDLTSEEKQILLA 329
GD++ +E+++L A
Sbjct: 354 RGDMSEDEERLLRA 367
>gi|338529950|ref|YP_004663284.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Myxococcus
fulvus HW-1]
gi|337256046|gb|AEI62206.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Myxococcus
fulvus HW-1]
Length = 225
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 112/198 (56%), Gaps = 4/198 (2%)
Query: 136 EALSP--YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
E P +L++ RKE+ VV +R+ + +V++ L D N++A R+ +++GVQ VH+V
Sbjct: 14 EQFEPEQFLLDVRKEKIDRVVSHRTRNFTVVLDRLEDSFNMAAVLRTCESMGVQEVHIV- 72
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ + N V+ G +KWLD++L+ + EC L+SRG+ + + + A S+Y + +
Sbjct: 73 INPEAPFVPNSRVAQGCDKWLDVKLYKSFAECREHLKSRGFSLYASAIQDGATSLYTLRF 132
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
A+V GNE GVSDE L+ D IPMKG S N+S AA + A+ R L
Sbjct: 133 DGKMALVFGNERHGVSDEVLAGVDGTFWIPMKGFSQSLNISAAASACISRAIAWRDEHL- 191
Query: 314 GCNGDLTSEEKQILLAEF 331
G +GDL+ E+ Q L F
Sbjct: 192 GQSGDLSPEDAQALRERF 209
>gi|138897021|ref|YP_001127474.1| rRNA methylase SpoU [Geobacillus thermodenitrificans NG80-2]
gi|196249846|ref|ZP_03148542.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. G11MC16]
gi|134268534|gb|ABO68729.1| rRNA methylase SpoU [Geobacillus thermodenitrificans NG80-2]
gi|196210722|gb|EDY05485.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. G11MC16]
Length = 245
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 115/190 (60%), Gaps = 3/190 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ +R +R +V+ R+ + +++E + D N +A R+A+A G+Q VHVV+ + +
Sbjct: 35 ILPKRLKRMYDVLNERTRYITVLMEAVDDPHNQAAVLRTAEAFGIQDVHVVTGRAP--FS 92
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
NR V+ A++WL + + + L+ +GY++ +++G I + +++ S PT ++
Sbjct: 93 PNRLVTRYADQWLTLHRQPDIKTAISDLKQQGYQVYASYLGEGTIPLSEVNVSKPTVLLF 152
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GVS+EAL L+D IPM G V SFN+SVAA + ++ V +RA R VG L+
Sbjct: 153 GNEHSGVSEEALRLADGTFVIPMYGFVQSFNISVAAALTLYD-VTERARRQVGRRYYLSH 211
Query: 322 EEKQILLAEF 331
EEK+ L ++
Sbjct: 212 EEKKTLYEQW 221
>gi|332880032|ref|ZP_08447716.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332682028|gb|EGJ54941.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 217
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L ++ EERKERF ++ R+ + +E + N SA R+ + GVQ H +
Sbjct: 6 LERFITEERKERFREIIGQRTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIEGRFG 65
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR + ++MGA+KW+D+ +D + C + LR++GY+I T DA + D D S +
Sbjct: 66 KRL--DAKIAMGAQKWVDVFRYDNTQHCIDSLRAKGYQIVATTPHKDAYFLNDFDISKKS 123
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
A G E G+S++ LS +D IPM G +S N+SVA I++ + DR R +
Sbjct: 124 AFFFGTEKEGLSEQVLSQADTFLKIPMVGFTESLNISVAVAIVLQQ-LTDRLRR-SDLHW 181
Query: 318 DLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKET 352
LT EE+ L ++ + ++ ++ Y + K+T
Sbjct: 182 QLTEEERYDTLVHWTKQSIRNVNDVLKRYEEIKDT 216
>gi|325285057|ref|YP_004260847.1| tRNA/rRNA methyltransferase SpoU [Cellulophaga lytica DSM 7489]
gi|324320511|gb|ADY27976.1| tRNA/rRNA methyltransferase (SpoU) [Cellulophaga lytica DSM 7489]
Length = 219
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 118/222 (53%), Gaps = 8/222 (3%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
++ ++++ L + EERK RF++++K+R+ + + +E + N SA RS DA GVQ+
Sbjct: 1 MTDTKLLTYLENIISEERKTRFLDILKDRTNYITVAIEDVFQMHNTSAVIRSCDAFGVQT 60
Query: 189 VHVVSCDSSKRYRE--NRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAI 246
H++ +Y E +++++MGA++W+ ++ EC + LR GY+I T D+
Sbjct: 61 AHLIES----KYSEPLDKNIAMGAQQWVTTPRYNTTTECIDTLRKDGYKIIATSPHTDSY 116
Query: 247 SVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVC 306
+ D A+ G E G+S E L +D IPM G +S N+SV+A IL+ H
Sbjct: 117 LLDDFKIDDKIALFFGTEKSGLSQEVLDKADGYVKIPMVGFSESLNISVSAAILLQHLTT 176
Query: 307 DRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAK 348
+ + N LT+EE + +++ + KS I+ Y K
Sbjct: 177 E--LKKTTKNWQLTAEEILAIRLDWTKKSIKSIDDILERYYK 216
>gi|385810384|ref|YP_005846780.1| tRNA methyltransferase [Ignavibacterium album JCM 16511]
gi|383802432|gb|AFH49512.1| tRNA methyltransferase [Ignavibacterium album JCM 16511]
Length = 196
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 104/171 (60%), Gaps = 1/171 (0%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
+ + E+R + N +K R Y + +V+E + D NVSA FR+ DA+G+ V +V
Sbjct: 1 MKEFKSEKRLIKITNTLKRRQYDLMVVLENIHDPHNVSAIFRTCDAVGIPKVSLVYT-KE 59
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
K + + S A KW++ + + + C++ LR G++I + + D+ S+Y++D++
Sbjct: 60 KFPKIGKKSSASAFKWVEKQKFTSIDSCYSELRKNGFKIYASSICSDSKSIYEIDFTGKV 119
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
AIV+GNE+RGVS++A L+D R IPM GMV S NVSVAA I+++ A R
Sbjct: 120 AIVLGNEHRGVSEKADKLADERIMIPMFGMVQSLNVSVAAAIILYEAARQR 170
>gi|390953016|ref|YP_006416774.1| rRNA methylase [Aequorivita sublithincola DSM 14238]
gi|390419002|gb|AFL79759.1| rRNA methylase [Aequorivita sublithincola DSM 14238]
Length = 219
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 4/214 (1%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E+++ L YL E R RF V+ R+ +V E + N SA R+ D G+Q +HVV
Sbjct: 4 ELLDHLQTYLTEHRNTRFQKVLSERTRHFTVVTEDVYQLHNTSAVMRTCDVFGIQDLHVV 63
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
SKR ++ ++MGA+KW+D + + + +EC + L+S GY+I T ++ +++ D
Sbjct: 64 EEKVSKRI--DKEIAMGAQKWVDFKRYHSIKECISNLKSSGYQIIATTPHENSTMLHEFD 121
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
S +A G E G+SD ++ +D IPM G +S N+SV+A I++ V +
Sbjct: 122 VSKKSAFFFGKETDGLSDTVMNAADGFLKIPMYGFTESLNISVSAAIILQSVVS--KMKQ 179
Query: 313 VGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEY 346
N L+ EEK + ++ + K++ I+ Y
Sbjct: 180 SNVNWQLSEEEKFEVEMQWLKKTIKASEEIIERY 213
>gi|269838434|ref|YP_003320662.1| tRNA guanosine-2'-O-methyltransferase [Sphaerobacter thermophilus
DSM 20745]
gi|269787697|gb|ACZ39840.1| tRNA guanosine-2'-O-methyltransferase [Sphaerobacter thermophilus
DSM 20745]
Length = 190
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 113/191 (59%), Gaps = 7/191 (3%)
Query: 150 FVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRE-NRHVSM 208
V+V+ R + +V+E + D N+SA RS DA+G+ +VH+V + + + E +R S
Sbjct: 1 MVDVLARRQPDLTVVIENVHDPHNISAVLRSCDAVGLLTVHLVY--TIEEWPELSRVSSA 58
Query: 209 GAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGV 268
A KWLDI ++ C+ LR++G+ I TH+ + +YD+D + P A+V GNE+RGV
Sbjct: 59 SAVKWLDIVRHESIEACYQALRAQGFTIYATHLSAASRDLYDLDLTGPVALVFGNEHRGV 118
Query: 269 SDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC--NGDLTSEEKQI 326
SDEA++ +D IPM GMV S N+SVA + ++ A+ R R VG L++EE+Q
Sbjct: 119 SDEAVANADGSVVIPMMGMVQSLNISVACAVSLYEAL--RQRRAVGAYDRPKLSAEERQA 176
Query: 327 LLAEFSLRHSK 337
L + R +
Sbjct: 177 RLVRWLQRERR 187
>gi|402493973|ref|ZP_10840721.1| tRNA/rRNA methyltransferase SpoU [Aquimarina agarilytica ZC1]
Length = 224
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 119/225 (52%), Gaps = 5/225 (2%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
+ + E++ L +L E R++ V+ R+ + +E + N SA RS D GVQ
Sbjct: 1 MYTEELIAYLESFLTERRQQNNHRVLSERTRHFTVAIEDVYQLHNTSAVMRSCDVFGVQD 60
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAIS 247
VHV+ + ++ +R ++MGA+KW+DI + + + C + L+ +GY+I AT+ G + ++
Sbjct: 61 VHVIEERNVRKI--DREIAMGAQKWVDIYRYHSTKACVSSLKEKGYQIVATSPHGSNCVT 118
Query: 248 VYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCD 307
+ D D S P G E+ G+SD L SD++ IPM G +S N+SV A I++ H
Sbjct: 119 LVDFDISKPAVFFFGKEDTGLSDYVLDQSDVQLKIPMFGFTESLNISVCAAIILQHVT-- 176
Query: 308 RATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKET 352
+ R N LT +E ++ + KS I+ Y +KE+
Sbjct: 177 QELRKSTTNWRLTPQEVLEKRYDWVCKVLKSHERIIKRYHDQKES 221
>gi|383453391|ref|YP_005367380.1| putative tRNA (guanosine-2-O-)-methyltransferase [Corallococcus
coralloides DSM 2259]
gi|380734538|gb|AFE10540.1| putative tRNA (guanosine-2-O-)-methyltransferase [Corallococcus
coralloides DSM 2259]
Length = 227
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 112/210 (53%), Gaps = 3/210 (1%)
Query: 136 EALSP--YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
E + P +L++ RKE+ VV R+ + +V++ L D N++A R+ +++GVQ VHVV
Sbjct: 14 EGVEPEQFLLDVRKEKIDRVVSQRTRNFVVVLDRLEDNFNMAAVLRTCESMGVQEVHVV- 72
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ + N V+ G +KWLD+ L+ EC L+ RG+ + + + A ++Y + +
Sbjct: 73 INPEAPFIPNLRVAQGCDKWLDVHLYKTFGECREHLKGRGFSLYASALREGATNLYSLRF 132
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
A+V GNE GVSD+ L+ D +PMKG S N+S AA + AV R L
Sbjct: 133 DTKFAMVFGNERYGVSDDVLNGVDGTFWVPMKGFSQSLNISAAASASITRAVAWRDEHLA 192
Query: 314 GCNGDLTSEEKQILLAEFSLRHSKSAISIV 343
G +GDLT E Q L F L K +V
Sbjct: 193 GGSGDLTPTEAQELRERFYLLGVKQRKRLV 222
>gi|433447799|ref|ZP_20411177.1| spoU rRNA Methylase family protein [Anoxybacillus flavithermus
TNO-09.006]
gi|431999716|gb|ELK20630.1| spoU rRNA Methylase family protein [Anoxybacillus flavithermus
TNO-09.006]
Length = 238
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 109/184 (59%), Gaps = 3/184 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R +R +V+ R+ + ++ E + D N +A RSA+A G+Q VHVV+ + +
Sbjct: 30 ILPSRLKRMYDVLSERTRYITILTEAVDDPHNQAAVLRSAEAFGIQDVHVVTGTAP--FE 87
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N+ V+ A+KWL + + + L+ GY++ +++G I + +D + PT ++
Sbjct: 88 PNKWVTRHADKWLTVHKHSSIERAIHHLQQNGYQVYASYLGEGTIPLEQIDVAKPTVLLF 147
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+RGVS+EAL+L+D + IPM G V SFN+SVAA I + + V RA ++V L+
Sbjct: 148 GNEHRGVSEEALALADGKFVIPMNGFVQSFNISVAAAISL-YDVTKRAKQVVNERYHLSL 206
Query: 322 EEKQ 325
EK+
Sbjct: 207 AEKK 210
>gi|423131492|ref|ZP_17119167.1| hypothetical protein HMPREF9714_02567 [Myroides odoratimimus CCUG
12901]
gi|371641908|gb|EHO07487.1| hypothetical protein HMPREF9714_02567 [Myroides odoratimimus CCUG
12901]
Length = 226
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E L +L E R ERF V+K+R+ +V E + N SA RS + GVQ +HV+
Sbjct: 14 LEYLETFLTENRVERFKEVLKDRTNHFTVVAEDVYQLHNTSAVMRSCEVFGVQDLHVIEQ 73
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
KR ++ +++GAEKW+DI + + +R +GY+I T ++A + D D S
Sbjct: 74 KFGKRI--DKEIALGAEKWVDIHRYASIPTAIEDIRKKGYQIVATTPHVEANHLEDFDIS 131
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
P+AI G E G+S E + +D IPM G +S N+SV+A I++ + TR+
Sbjct: 132 KPSAIFFGTEKNGLSPEIIEQADAYIKIPMVGFTESLNISVSAAIIIQNL----TTRVRN 187
Query: 315 CNGDLTSEEKQIL 327
+ D +E++IL
Sbjct: 188 SDVDWRLKEEEIL 200
>gi|256820355|ref|YP_003141634.1| tRNA/rRNA methyltransferase SpoU [Capnocytophaga ochracea DSM 7271]
gi|429747304|ref|ZP_19280580.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|256581938|gb|ACU93073.1| tRNA/rRNA methyltransferase (SpoU) [Capnocytophaga ochracea DSM
7271]
gi|429163442|gb|EKY05668.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
380 str. F0488]
Length = 220
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 8/221 (3%)
Query: 131 SSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH 190
+ E++ L ++ EERKERF+ V+ R+ + +E + N SA R+ + GVQ H
Sbjct: 2 NQELLTYLEHFITEERKERFLQVISARTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAH 61
Query: 191 VVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD 250
+ KR + ++MGA+KW+D+ ++ + C + LR++GY+I T DA + D
Sbjct: 62 SIEGRFGKRL--DAKIAMGAQKWVDVFRYNDTQSCIDALRAQGYQIVATTPHKDAYFLND 119
Query: 251 MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
D S +A G E G+S++ LS +D IPM G +S N+SVA I++ + D+
Sbjct: 120 FDISKKSAFFFGTEKEGLSEQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQ-LTDKLR 178
Query: 311 RLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
R LT EE+ L + +K +I V + KR E
Sbjct: 179 R-SQVAWQLTDEERLSTLINW----TKKSIRNVKDVLKRYE 214
>gi|312112708|ref|YP_003991024.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. Y4.1MC1]
gi|336237170|ref|YP_004589786.1| tRNA/rRNA methyltransferase SpoU [Geobacillus thermoglucosidasius
C56-YS93]
gi|423721665|ref|ZP_17695847.1| tRNA/rRNA methyltransferase spoU [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217809|gb|ADP76413.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. Y4.1MC1]
gi|335364025|gb|AEH49705.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus thermoglucosidasius
C56-YS93]
gi|383365468|gb|EID42764.1| tRNA/rRNA methyltransferase spoU [Geobacillus thermoglucosidans
TNO-09.020]
Length = 237
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ ER +R ++++ R+ V ++ E + D N +A R+A+A GVQ V+VV+ + ++
Sbjct: 30 ILPERLKRMYDILQQRTRYVTVLTEAVDDPHNQAAVLRTAEAFGVQDVYVVAGRAP--FQ 87
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N V+ A+KWL + L+++GYR+ +++G I + D+D S PTA++
Sbjct: 88 PNPLVTRHADKWLTLRQQPDIVTAIQDLQAKGYRVYASYLGEGTIRLCDIDVSQPTALLF 147
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GVS EA+ ++D IPM G V SFN+SVAA + ++ V +RA R G L+
Sbjct: 148 GNEHSGVSQEAIRVADATFMIPMYGFVQSFNISVAAALALYD-VTERARRQAGERYYLSF 206
Query: 322 EEKQIL 327
+EK+ L
Sbjct: 207 QEKKEL 212
>gi|108758120|ref|YP_629729.1| tRNA (guanosine-2'-O-)-methyltransferase [Myxococcus xanthus DK
1622]
gi|108462000|gb|ABF87185.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Myxococcus
xanthus DK 1622]
Length = 225
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 112/198 (56%), Gaps = 4/198 (2%)
Query: 136 EALSP--YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
E P +L++ RKE+ VV +R+ + +V++ L D N++A R+ +++GVQ VH++
Sbjct: 14 EQFEPEQFLLDVRKEKIDRVVSHRTRNFTVVLDRLEDSFNMAAVLRTCESMGVQEVHII- 72
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ + N V+ G +KWLD++L+ EC L+SRG+ + + + A S+Y + +
Sbjct: 73 INPEAPFVPNSRVAQGCDKWLDVKLYRTFAECREHLKSRGFSLYASAIQEGATSLYTLRF 132
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
A+V GNE RGVS++ L+ D +PMKG S N+S AA + A+ R L
Sbjct: 133 DGKMALVFGNERRGVSEDVLAGVDGTFWVPMKGFSQSLNISAAASACISRAIAWRDEHL- 191
Query: 314 GCNGDLTSEEKQILLAEF 331
G +GDL+ E+ Q L F
Sbjct: 192 GQSGDLSPEDAQALRERF 209
>gi|405355434|ref|ZP_11024660.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Chondromyces
apiculatus DSM 436]
gi|397091776|gb|EJJ22578.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 225
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 110/198 (55%), Gaps = 4/198 (2%)
Query: 136 EALSP--YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
E P +L++ RKE+ VV +R+ + +V++ L D N++A R+ +++GVQ VH+V
Sbjct: 14 EQFEPEQFLLDVRKEKIDRVVSHRTRNFTVVLDRLEDSFNMAAVLRTCESMGVQEVHIV- 72
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ + N V+ G +KWLD++L+ EC L+SRG+ + + + A S+Y + +
Sbjct: 73 INPEAPFVPNSRVAQGCDKWLDVKLYKTFTECREHLKSRGFSLYASAIQDGATSLYTLRF 132
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
A+V GNE GVS+E L D +PMKG S N+S AA + A+ R L
Sbjct: 133 DTKMALVFGNERYGVSEEVLKGVDGTFWVPMKGFSQSLNISAAASACISRAIAWRDEHL- 191
Query: 314 GCNGDLTSEEKQILLAEF 331
G +GDL+ E+ Q L F
Sbjct: 192 GQSGDLSPEDAQALRERF 209
>gi|429757070|ref|ZP_19289627.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
324 str. F0483]
gi|429169717|gb|EKY11458.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
324 str. F0483]
Length = 220
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 8/221 (3%)
Query: 131 SSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH 190
+ E++ L ++ EERKERF+ V+ R+ + +E + N SA R+ + GVQ H
Sbjct: 2 NQELLTYLEHFITEERKERFLQVISVRTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAH 61
Query: 191 VVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD 250
+ KR + ++MGA+KW+D+ ++ + C + LR++GY+I T DA + D
Sbjct: 62 SIEGRFGKRI--DAKIAMGAQKWVDVFRYNDTQSCIDTLRAQGYQIVATTPHKDAYFLND 119
Query: 251 MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
D S +A G E G+S++ LS +D IPM G +S N+SVA I++ + D+
Sbjct: 120 FDISKKSAFFFGTEKEGLSEQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQ-LTDKLR 178
Query: 311 RLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
R LT EE+ L + +K +I V + KR E
Sbjct: 179 R-SQVAWQLTDEERLSTLINW----TKKSIRNVKDVLKRYE 214
>gi|347536430|ref|YP_004843855.1| putative tRNA/rRNA methyltransferase [Flavobacterium branchiophilum
FL-15]
gi|345529588|emb|CCB69618.1| Probable tRNA/rRNA methyltransferase [Flavobacterium branchiophilum
FL-15]
Length = 220
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L +L E RKE F+ ++KNR+ + +E + N SA RS + GVQ +HV+
Sbjct: 10 LETFLTENRKENFLKILKNRTNHFTVAIEDVYQLHNTSAVMRSCEVFGVQELHVIEQRFG 69
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
K +R ++MGA+KW+DI +++ + C LR++GY+I T + + D D S P+
Sbjct: 70 KSI--DREIAMGAQKWVDIYKYESQQTCIETLRNKGYQIIATTPHENDCLLEDFDISKPS 127
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
A+ G E G+S+E + +D IPM G +S N+SV+A I++ +
Sbjct: 128 ALFFGTERAGLSEEIIKNADGFLKIPMVGFTESLNISVSAAIILQN 173
>gi|315223488|ref|ZP_07865344.1| tRNA guanosine-2'-O-methyltransferase [Capnocytophaga ochracea
F0287]
gi|420160475|ref|ZP_14667258.1| RNA methyltransferase, TrmH family [Capnocytophaga ochracea str.
Holt 25]
gi|314946523|gb|EFS98515.1| tRNA guanosine-2'-O-methyltransferase [Capnocytophaga ochracea
F0287]
gi|394760669|gb|EJF43183.1| RNA methyltransferase, TrmH family [Capnocytophaga ochracea str.
Holt 25]
Length = 220
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 114/221 (51%), Gaps = 8/221 (3%)
Query: 131 SSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH 190
+ E++ L ++ EERKERF+ V+ R+ + +E + N SA R+ + GVQ H
Sbjct: 2 NQELLTYLEHFITEERKERFLQVISARTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAH 61
Query: 191 VVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD 250
+ KR + ++MGA+KW+D+ ++ + C + LR++GY+I T DA + D
Sbjct: 62 SIEGRFGKRI--DAKIAMGAQKWVDVFRYNDTQSCIDALRAQGYQIVATTPHKDAYFLND 119
Query: 251 MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
D S +A G E G+S + LS +D IPM G +S N+SVA I++ + D+
Sbjct: 120 FDISKKSAFFFGTEKEGLSQQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQ-LTDKLR 178
Query: 311 RLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
R LT EE+ L + +K +I V + KR E
Sbjct: 179 R-SQVAWQLTDEERLSTLINW----TKKSIRNVKDVLKRYE 214
>gi|323451205|gb|EGB07083.1| hypothetical protein AURANDRAFT_14487, partial [Aureococcus
anophagefferens]
Length = 164
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 96/167 (57%), Gaps = 5/167 (2%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L+PY+ ERK FV V R+ + + E S+ N A R+ DA GVQ V VV
Sbjct: 1 LAPYVSPERKAAFVKVAGQRTAHLRVAFERPSNPANAWACLRTIDAFGVQDVDVVKDTLE 60
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC-P 256
R H +MGA+KWL + DAP + + L + GY++A T +G + + D+DW+ P
Sbjct: 61 ARM----HAAMGAQKWLTLREHDAPGDLVDALHAAGYKVAATDLGPGSRPIGDVDWAAEP 116
Query: 257 TAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
A+V GNE G+S++ + +D+R +PM+G+ +S N+SV+ G + H
Sbjct: 117 YALVFGNEETGISEDLRARADVRVHLPMRGLAESLNLSVSVGACLAH 163
>gi|221632050|ref|YP_002521271.1| tRNA guanosine-2'-O-methyltransferase [Thermomicrobium roseum DSM
5159]
gi|221155367|gb|ACM04494.1| tRNA guanosine-2'-O-methyltransferase [Thermomicrobium roseum DSM
5159]
Length = 217
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 103/176 (58%), Gaps = 7/176 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV-SCDSSKRY 200
+ E R R V+ R + +V+E + D NVSA RS DA+G+ VH+V + +
Sbjct: 5 ITERRLARMREVLARRQPDLTVVLENVHDPHNVSAVLRSCDAVGLLRVHLVYTLEEFPEL 64
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV--YDMDWSCPTA 258
EN VS A KWL++ + C+ LRS+G+ I TT++G A SV YD+D + P A
Sbjct: 65 SEN--VSGSALKWLELVFHPSIEACYRTLRSQGFTIYTTYLGDPARSVDLYDLDLTKPVA 122
Query: 259 IVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
+V GNE RGVSDEA++ +D IPM GMV S N+SVA + ++ A+ R RL G
Sbjct: 123 LVFGNEQRGVSDEAVAGADGNFVIPMMGMVRSLNISVACAVSLYEAL--RQRRLAG 176
>gi|298208939|ref|YP_003717118.1| spoU protein (spoU) [Croceibacter atlanticus HTCC2559]
gi|83848866|gb|EAP86735.1| spoU protein (spoU) [Croceibacter atlanticus HTCC2559]
Length = 238
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 118/220 (53%), Gaps = 7/220 (3%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
+ ++++ L YL R+E F V+ R+ + E + N SA RS D GVQ+
Sbjct: 14 MRDQKLLDYLQSYLTPRRQELFKKVLSQRTNHFTVATEDVYQLHNTSAVIRSCDVFGVQN 73
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
VH++ ++K+ +R ++MGA+KW+ I + + ++ L+ +GY+I T +++ ++
Sbjct: 74 VHIIEEQNAKKI--DREIAMGAQKWVTINRYHSVQDSIKSLKEKGYQIVATSPHIESHNL 131
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D D + P+AI G E G+S+E L+ +D IPM G +S N+SV+A I++ H +
Sbjct: 132 RDFDVTKPSAIFFGTEKDGLSEEVLNQADSYIKIPMVGFTESLNISVSAAIILQHITNEL 191
Query: 309 ATRLVGCNGDLTSEE---KQILLAEFSLRHSKSAISIVHE 345
V + LT EE Q+L + +++ S I +E
Sbjct: 192 KQSEV--DWKLTDEEFFDTQLLWTKNTIKSSDKIIERYYE 229
>gi|149195840|ref|ZP_01872897.1| spoU protein [Lentisphaera araneosa HTCC2155]
gi|149141302|gb|EDM29698.1| spoU protein [Lentisphaera araneosa HTCC2155]
Length = 233
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 102/175 (58%), Gaps = 7/175 (4%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
++ L +L+++R E V R+ +CLV+E L N SA R+ADA G+Q+++V+
Sbjct: 16 LLAKLQSHLIDDRIELIDKVCSERTEHICLVLENLYQEHNASAILRNADAFGIQNINVIE 75
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPR-----ECFNVLRSRGYRIATTHVGMDAISV 248
D+ + N+ VSM A KWLDI+ W+ + +C + L+ +GY+I T + ++I++
Sbjct: 76 NDND--FAANKEVSMSAHKWLDIKAWNESKIDNTVKCLSALKKQGYKICATSLRPESITL 133
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
++ P A+ G E G+S+ A ++D IPM G + SFNVSVA+ + + H
Sbjct: 134 DELPVDEPIALCFGTELTGLSEVAHEMADYMTYIPMNGFIQSFNVSVASALSLSH 188
>gi|423135238|ref|ZP_17122884.1| hypothetical protein HMPREF9715_02659 [Myroides odoratimimus CIP
101113]
gi|371643319|gb|EHO08875.1| hypothetical protein HMPREF9715_02659 [Myroides odoratimimus CIP
101113]
Length = 226
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E L +L E R ERF V+K+R+ +V E + N SA RS + GVQ +HV+
Sbjct: 14 LEYLETFLTENRVERFKEVLKDRTNHFTVVAEDVYQLHNTSAVMRSCEVFGVQDLHVIEQ 73
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
KR ++ +++GAEKW+DI + + +R +GY+I T ++A + D D S
Sbjct: 74 KFGKRI--DKEIALGAEKWVDIHRYASIPTAIEDIRKKGYQIVATTPHLEANHLEDFDIS 131
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
P+AI G E G+S E + +D IPM G +S N+SV+A I++ + TR+
Sbjct: 132 KPSAIFFGTEKNGLSPEIIEQADAYIKIPMVGFTESLNISVSAAIIIQNL----TTRVRN 187
Query: 315 CNGDLTSEEKQIL 327
+ + +E++IL
Sbjct: 188 SDVEWRLKEEEIL 200
>gi|332293222|ref|YP_004431831.1| tRNA/rRNA methyltransferase SpoU [Krokinobacter sp. 4H-3-7-5]
gi|332171308|gb|AEE20563.1| tRNA/rRNA methyltransferase (SpoU) [Krokinobacter sp. 4H-3-7-5]
Length = 218
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
E++ L +L E R + F V+K R+ + VE + N SA RS ++ GVQ +HV
Sbjct: 3 QELLAYLQSFLTERRVQLFDKVLKERTNHFTVAVEDVYQLHNTSAVIRSCESFGVQELHV 62
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
+ + KR +R ++MGA+KW+D++ + + C LR +GY+I T DA + D
Sbjct: 63 IEEVNVKRI--DREIAMGAQKWVDVQRHSSAKHCIENLRKQGYKIVATSPHKDAHRLEDF 120
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
D + AI G E G+SD L ++D IPM G +S N+SV+A I + H
Sbjct: 121 DITEKAAIFFGRETEGLSDTVLDMADDFIYIPMVGFTESLNISVSAAITLQH 172
>gi|229917708|ref|YP_002886354.1| tRNA guanosine-2'-O-methyltransferase [Exiguobacterium sp. AT1b]
gi|229469137|gb|ACQ70909.1| tRNA guanosine-2'-O-methyltransferase [Exiguobacterium sp. AT1b]
Length = 254
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 114/197 (57%), Gaps = 3/197 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L LM +R +R V+ R+ + ++ EG+ D N SA RSADA GVQ++HVV +
Sbjct: 35 LYEMLMPDRIKRMYEVLNTRTNHITILTEGVDDPHNQSAVLRSADAFGVQTLHVV--EGR 92
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
+++ N ++ A++W+D+ + E + L+ GY++ T + +AI + ++D S PT
Sbjct: 93 AKFKPNSIIAKSADRWVDVVEHGSIEEAIDALKESGYQVYATALSEEAIPLEEVDVSKPT 152
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
++ GNE+ GVS+ AL +D IPM+G V S N+SVAA I ++ V R+ +V
Sbjct: 153 VLLFGNEHSGVSETALHKADGNFVIPMQGYVQSLNISVAAAISLYD-VTTRSRHIVTDGY 211
Query: 318 DLTSEEKQILLAEFSLR 334
+L E++ + ++ ++
Sbjct: 212 ELPVEDQARIFKDWMVK 228
>gi|115372384|ref|ZP_01459693.1| rRNA methylase [Stigmatella aurantiaca DW4/3-1]
gi|310819547|ref|YP_003951905.1| tRNA (guanosine-2'-o-)-methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|115370597|gb|EAU69523.1| rRNA methylase [Stigmatella aurantiaca DW4/3-1]
gi|309392619|gb|ADO70078.1| tRNA (Guanosine-2'-O-)-methyltransferase [Stigmatella aurantiaca
DW4/3-1]
Length = 226
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L++ RKE+ VV+ R+ + +V++ L D N++A R+ +A+GVQ VHVV + +
Sbjct: 22 LLDVRKEKIDRVVEQRTRTFTVVLDRLEDSFNMAAVLRTCEAMGVQEVHVV-INPEAPFL 80
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N V+ G +KWLD++L+ EC L+ RG+ + + + A S+Y M + AIV
Sbjct: 81 PNSRVAQGCDKWLDVKLYKTFAECREHLQERGFALYASAIREGATSLYSMRFDSKVAIVF 140
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE GVS++ L+ D IPM+G S N+S AA + + R L G GDLT
Sbjct: 141 GNERFGVSEDVLAGVDGTFWIPMRGFSQSINISAAASACVSRVMAWREEHL-GKVGDLTE 199
Query: 322 EEKQILLAEF 331
EE Q L F
Sbjct: 200 EEAQALRERF 209
>gi|375144520|ref|YP_005006961.1| tRNA guanosine-2'-O-methyltransferase [Niastella koreensis GR20-10]
gi|361058566|gb|AEV97557.1| tRNA guanosine-2'-O-methyltransferase [Niastella koreensis GR20-10]
Length = 212
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 96/160 (60%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R + V+K R + +V+E +SD N+SA R+ DA+G+Q V+V++ + +
Sbjct: 4 ERHDRLMAVLKKRQSDLTVVLENVSDPHNISAVMRTCDAVGIQEVYVLNNKIPRHKKWGA 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S A KWL I + CF LR + RI TTH+ DA+++YD+D++ A+V GNE
Sbjct: 64 RSSSSAAKWLSIYQFTDAEACFAALRQKYDRILTTHLSSDAVNLYDIDFTGRIALVFGNE 123
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+ GVSDE +++D IP G++ S N+SVA + ++ A
Sbjct: 124 HSGVSDEIRAMADGNFIIPQVGIIKSLNISVACAVTLYEA 163
>gi|120435451|ref|YP_861137.1| TrmH family tRNA/rRNA methyltransferase [Gramella forsetii KT0803]
gi|117577601|emb|CAL66070.1| TrmH family tRNA/rRNA methyltransferase [Gramella forsetii KT0803]
Length = 217
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 4/218 (1%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
++ ++ L +L RK F V+ R+ + +V + + N SA RS D G+Q+
Sbjct: 1 MNDKNTLDHLQSFLTPRRKALFEKVLAQRTDHLTVVAQDVYQLHNTSAVVRSCDVFGIQN 60
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
+HV+ +R ++ ++MGA+KW+DI + + C L+ +GYRI T D+ +
Sbjct: 61 IHVIEEKIPRRI--DKEIAMGAQKWVDINRYTSTTTCLKNLKKKGYRIVATSPHDDSQLL 118
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D D S P A+ G E G+S+E + +D IPM G +S N+SV+A I++
Sbjct: 119 EDFDISTPAALFFGTEKDGLSEEVMREADATVKIPMVGFTESLNISVSAAIILQSLTT-- 176
Query: 309 ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEY 346
R G + EEK ++ ++ + K++ I+ +
Sbjct: 177 KLRKSGVEWQFSEEEKNLIRMNWTKKTVKNSEEIIEHF 214
>gi|344201379|ref|YP_004786522.1| tRNA/rRNA methyltransferase SpoU [Muricauda ruestringensis DSM
13258]
gi|343953301|gb|AEM69100.1| tRNA/rRNA methyltransferase (SpoU) [Muricauda ruestringensis DSM
13258]
Length = 217
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 8/217 (3%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
++++ L YL +ERK+RF++V++ R+ + + VE + N SA RS D GVQ VHV+
Sbjct: 5 DLLKYLETYLTDERKQRFLDVLQQRTKHITVAVEDVYQLHNTSAIIRSCDVFGVQDVHVI 64
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR +N ++MGAE+W+D+ + +C + L+ GY+I T D+ + +
Sbjct: 65 ENRFGKRLDKN--IAMGAEQWVDVYRYQTTADCISKLKKDGYQIIATTPHTDSTLLPNFF 122
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
+A+ G E G+SDE + +D IPM G +S NVSV+A I++ A ++
Sbjct: 123 PLQKSALFFGTEKEGLSDEVMQQADGFLKIPMVGFSESLNVSVSAAIIIQQL----AQKV 178
Query: 313 VGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
C DL + I + E L +K +I V KR
Sbjct: 179 RDC--DLNWQLTDIEVFEKRLDWTKKSIKDVEGIIKR 213
>gi|373109839|ref|ZP_09524114.1| hypothetical protein HMPREF9712_01707 [Myroides odoratimimus CCUG
10230]
gi|423327905|ref|ZP_17305713.1| hypothetical protein HMPREF9711_01287 [Myroides odoratimimus CCUG
3837]
gi|371644185|gb|EHO09725.1| hypothetical protein HMPREF9712_01707 [Myroides odoratimimus CCUG
10230]
gi|404605906|gb|EKB05477.1| hypothetical protein HMPREF9711_01287 [Myroides odoratimimus CCUG
3837]
Length = 226
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E L +L E R ERF V+K+R+ +V E + N SA RS + GVQ +HV+
Sbjct: 14 LEYLETFLTENRVERFKEVLKDRTNHFTVVAEDVYQLHNTSAVMRSCEVFGVQDLHVIEQ 73
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
KR ++ +++GAEKW+DI + + +R +GY+I T ++A + D D S
Sbjct: 74 KFGKRI--DKEIALGAEKWVDIHRYASIPTAIEDIRKKGYQIVATTPHVEANHLEDFDIS 131
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
P+AI G E G+S E + +D IPM G +S N+SV+A I++ + TR+
Sbjct: 132 KPSAIFFGTEKNGLSPEIIEQADAYIKIPMVGFTESLNISVSAAIIIQNL----TTRVRN 187
Query: 315 CNGDLTSEEKQIL 327
+ + +E++IL
Sbjct: 188 SDVEWRLKEEEIL 200
>gi|363582239|ref|ZP_09315049.1| tRNA/rRNA methyltransferase SpoU [Flavobacteriaceae bacterium HQM9]
Length = 228
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
+ + +V L +L E R++ V+ R+ + +E + N SA RS D GVQ
Sbjct: 1 MYTETLVAYLESFLTERRQQNNHRVLSQRTRHFTVAIEDVYQLHNTSAVMRSCDVFGVQD 60
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAIS 247
VHV+ + ++ +R ++MGA+KW+DI + + + C + L+ +GY+I AT+ G + ++
Sbjct: 61 VHVIEERNVRKI--DREIAMGAQKWVDIHRYHSTKSCVSSLKEKGYQIVATSPHGNNCVT 118
Query: 248 VYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCD 307
+ D D S P+ G E+ G+SD L SD++ +IPM G +S N+SV A I++ H
Sbjct: 119 LADFDISKPSVFFFGKEDTGLSDYVLEQSDVQLNIPMFGFTESLNISVCAAIILQHVT-- 176
Query: 308 RATRLVGCNGDLTSEE 323
+ R N LT +E
Sbjct: 177 QELRKSTLNWRLTPQE 192
>gi|393780686|ref|ZP_10368894.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|392608140|gb|EIW91002.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
412 str. F0487]
Length = 220
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 8/221 (3%)
Query: 131 SSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH 190
+ E++ L ++ EERKERF+ V+ R+ + +E + N SA R+ + GVQ H
Sbjct: 2 NQELLTYLEHFITEERKERFLQVISARTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAH 61
Query: 191 VVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD 250
+ KR + ++MGA+KW+D+ ++ + C + LR +GY+I T DA + D
Sbjct: 62 SIEGRFGKRL--DAKIAMGAQKWVDVFRYNDTQSCIDALRVQGYQIVATTPHKDAYFLND 119
Query: 251 MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
D S +A G E G+S + LS +D IPM G +S N+SVA I++ + D+
Sbjct: 120 FDISKKSAFFFGTEKEGLSQQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQ-LTDKLR 178
Query: 311 RLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
R LT EE+ L + +K +I V + KR E
Sbjct: 179 R-SQVAWQLTDEERLSTLINW----TKKSIRNVKDVLKRYE 214
>gi|149189234|ref|ZP_01867521.1| tRNA guanosine-2'-O-methyltransferase [Vibrio shilonii AK1]
gi|148836988|gb|EDL53938.1| tRNA guanosine-2'-O-methyltransferase [Vibrio shilonii AK1]
Length = 228
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L++E + NVSA R+ADA GV VH V D ++ R
Sbjct: 4 ERYTRIQEVLKARQPDLTLLLEQVHKPNNVSAVIRTADAAGVHKVHAVWPD--EKMRTLS 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+++E D + L+S+G ++ T++ +A+ D+D++ PTAI++G E
Sbjct: 62 HTSAGARNWVEVETHDTVADAVRTLKSQGMQVLATNLSENAVDFRDIDYTKPTAIILGGE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G++ +AL+ +D IPM GMV S NVSVA+ +++ A R
Sbjct: 122 KHGITQDALTEADQDIIIPMVGMVQSLNVSVASALILFEAQRQR 165
>gi|409123264|ref|ZP_11222659.1| TrmH family tRNA/rRNA methyltransferase [Gillisia sp. CBA3202]
Length = 217
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
++S E + L L ERK F V+ R+ +V E + N SA RS D G+Q+
Sbjct: 1 MASKEFLAFLEELLTPERKALFNKVIAQRTNHFTVVSEDVYQLHNTSAVIRSCDVFGIQN 60
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
VHV+ K+ +R ++MGA+KW+ + D +C LR GY+I T +AI +
Sbjct: 61 VHVIEEQKVKKI--DREIAMGAQKWVTLNRHDDSLKCIQKLREEGYQIIATSPNAEAIEL 118
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
D D P A+ +G E G+S E LS +D IPM G +S N+SV+A I++
Sbjct: 119 SDFDIDKPAALFLGTEKDGLSQEVLSNADQCIKIPMVGFTESLNISVSAAIILQE 173
>gi|374597318|ref|ZP_09670322.1| tRNA/rRNA methyltransferase (SpoU) [Gillisia limnaea DSM 15749]
gi|373871957|gb|EHQ03955.1| tRNA/rRNA methyltransferase (SpoU) [Gillisia limnaea DSM 15749]
Length = 219
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
+++ L +L +RK F V+ +R+ + E + N SA RS D G+Q++HV+
Sbjct: 7 LIDFLENFLTPKRKALFEKVLNSRTNHFTVATEDVYQLHNTSAVMRSCDVFGIQNIHVIE 66
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ KR +R ++MGA+KW+ + + ++C LR +GY+I T ++ ++ D D
Sbjct: 67 ERNLKRI--DREIAMGAQKWVSLNRHKSSKDCVEALREKGYQIVATTPYGNSKNLSDFDI 124
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
P+AI G E G+S E + +D IPM G +S N+SV+A I++ H + R+
Sbjct: 125 CKPSAIFFGTEKHGLSQEVMENADTFLRIPMVGFTESLNISVSAAIILQHLT--QELRMS 182
Query: 314 GCNGDLTSEEK 324
N +LT EK
Sbjct: 183 KINWELTENEK 193
>gi|420151007|ref|ZP_14658160.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|394751190|gb|EJF34989.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
335 str. F0486]
Length = 220
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 8/221 (3%)
Query: 131 SSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH 190
+ E++ L ++ EERKERF+ V+ R+ + +E + N SA R+ + GVQ H
Sbjct: 2 NQELLTYLEHFITEERKERFLQVISARTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAH 61
Query: 191 VVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD 250
+ KR + ++MGA+KW+D+ ++ + C LR++GY+I T DA + D
Sbjct: 62 SIEGRFGKRL--DAKIAMGAQKWVDVFRYNDTQSCIEALRAQGYQIVATTPHKDAYFLND 119
Query: 251 MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
D S + G E G+S++ LS +D IPM G +S N+SVA I++ + D+
Sbjct: 120 FDISKKSVFFFGTEKEGLSEQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQ-LTDKLR 178
Query: 311 RLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
R LT EE+ L + +K +I V + KR E
Sbjct: 179 R-SQVAWQLTDEERLSTLINW----TKKSIRNVKDVLKRYE 214
>gi|126663591|ref|ZP_01734588.1| spoU protein [Flavobacteria bacterium BAL38]
gi|126624539|gb|EAZ95230.1| spoU protein [Flavobacteria bacterium BAL38]
Length = 220
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E++E L ++ E RKE F+ V+KNR+ + +E + N SA RS + G+Q ++VV
Sbjct: 7 ELLEYLEGFITENRKEGFLRVLKNRTKHFTIAMEDVFQLHNTSAVMRSCEVFGIQELNVV 66
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
K ++ ++MGAEKW+DI + + ++C L+ +GY+I T D+ +++ D
Sbjct: 67 EQKFGKSI--DKEIAMGAEKWVDINRFSSIQDCITNLKQKGYQIIATTPHNDSCLLHEFD 124
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
+ P+A+ G E G+S+E + +D IPM G +S N+SV+A I++
Sbjct: 125 ITQPSALFFGTERDGLSEEVMQQADGFLKIPMVGYTESLNISVSAAIIIQ 174
>gi|269925433|ref|YP_003322056.1| tRNA guanosine-2'-O-methyltransferase [Thermobaculum terrenum ATCC
BAA-798]
gi|269789093|gb|ACZ41234.1| tRNA guanosine-2'-O-methyltransferase [Thermobaculum terrenum ATCC
BAA-798]
Length = 212
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 13/174 (7%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC-----DS 196
+ E R R + V+K R + +V+E + D NVSA RS DA+GV +VH+V D
Sbjct: 7 ITERRLNRMIQVLKRRQPDLTVVLENVHDPHNVSAVLRSCDAVGVLAVHLVYTIEEFPDL 66
Query: 197 SKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVG--MDAISVYDMDWS 254
SK +VS A KWL+I ++C++ LRS+G I TT++ + +Y +D +
Sbjct: 67 SK------NVSGSALKWLEIIKHKDIQDCYDTLRSQGMTIYTTYLADPQRSHDLYSLDLT 120
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
PTA+V GNE RGVS+EA L+D IPM GMV S N+SVA + ++ A+ R
Sbjct: 121 KPTALVFGNEQRGVSEEASRLADGNFVIPMMGMVQSLNISVACAVTLYEALRQR 174
>gi|256421016|ref|YP_003121669.1| tRNA/rRNA methyltransferase SpoU [Chitinophaga pinensis DSM 2588]
gi|256035924|gb|ACU59468.1| tRNA/rRNA methyltransferase (SpoU) [Chitinophaga pinensis DSM 2588]
Length = 197
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 96/161 (59%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER+ER ++V+ R + +V+E + D N+SA R+ DA+G+Q V+V++ +++R R
Sbjct: 4 ERRERLLSVLNKRQAGLTVVLENVFDPHNISAVLRTCDAVGIQDVYVLNTTTARRKRWGH 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S A KWL + + C V+R + +I TTH+ DA S+Y++D++ A+V GNE
Sbjct: 64 KSSSSAAKWLTVHQFSDTATCMAVVREKYDKIYTTHLAADAKSLYELDFTGSVALVFGNE 123
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
GVS+E L D IP G++ S N+SVA + ++ A+
Sbjct: 124 QEGVSEEIRKLCDGNFIIPQVGIIKSLNISVACAVSIYEAM 164
>gi|119477702|ref|ZP_01617852.1| tRNA (guanosine-2'-O-)-methyltransferase [marine gamma
proteobacterium HTCC2143]
gi|119449205|gb|EAW30445.1| tRNA (guanosine-2'-O-)-methyltransferase [marine gamma
proteobacterium HTCC2143]
Length = 239
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 112/193 (58%), Gaps = 6/193 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R ++ R + ++ + + N+SA R+ADA+G+ SVH V D K YR
Sbjct: 1 MTPERYTRLRTILDQRQPDLTVLTDYVHKGRNLSAIVRTADAVGIGSVHCVVGD--KDYR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R ++G+ +++++ + + L+SRG+++ HV A+ +++D++ PT +++
Sbjct: 59 SFRGTALGSHRYVEVHRYTELNQPVTALKSRGFQVVAAHVSATAVDYHEVDYTAPTVLLM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC--NGDL 319
G E G+S + L +D+ ++PM GMV+SFNVSVAAGI+++ A R ++ GC L
Sbjct: 119 GAEKNGLSADGLEAADIHITVPMVGMVESFNVSVAAGIILNEARHQR--QIAGCYDRQRL 176
Query: 320 TSEEKQILLAEFS 332
+ +E L E++
Sbjct: 177 SQQEYNRLFFEWA 189
>gi|254507286|ref|ZP_05119422.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus 16]
gi|219549746|gb|EED26735.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus 16]
Length = 227
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA GV VH V + R
Sbjct: 4 ERYNRIQEVLKARQADLTLCLEEVHKPNNVSAVIRTADATGVHKVHAVWPNE---MRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+D+E D+ + N L+S+G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVDVETHDSIEDAINELKSQGMQVLVTNLSETAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KTGASEQAKQLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|410619017|ref|ZP_11329935.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola polaris LMG
21857]
gi|410161432|dbj|GAC34073.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola polaris LMG
21857]
Length = 255
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 112/191 (58%), Gaps = 7/191 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER +R ++ R S+ + +E ++ NVSA RS DA+G+ +H V D+ R R
Sbjct: 7 MTAERYQRIRKLLATRQPSLTICLEQVNKPHNVSALIRSCDAVGINRIHAV-WDNKARLR 65
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ SMGAE W+ ++ + + + L+ +G ++ TH+ DA+ ++D++ PTAI++
Sbjct: 66 --KKTSMGAENWVYTDMHPSIGDAVSHLKQQGMQVLVTHLSDDAVDFREIDYTKPTAIIL 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC--NGDL 319
G E G ++EA++L+D IPM GMV S NVSVAA ++++ A R LVG +L
Sbjct: 124 GQEKTGATEEAIALADKNIVIPMVGMVQSLNVSVAAAVVLYEA--QRQRELVGMYKTINL 181
Query: 320 TSEEKQILLAE 330
+ +E Q +L E
Sbjct: 182 SEQECQRVLFE 192
>gi|374598005|ref|ZP_09671007.1| tRNA/rRNA methyltransferase (SpoU) [Myroides odoratus DSM 2801]
gi|423323659|ref|ZP_17301501.1| hypothetical protein HMPREF9716_00858 [Myroides odoratimimus CIP
103059]
gi|373909475|gb|EHQ41324.1| tRNA/rRNA methyltransferase (SpoU) [Myroides odoratus DSM 2801]
gi|404609186|gb|EKB08582.1| hypothetical protein HMPREF9716_00858 [Myroides odoratimimus CIP
103059]
Length = 237
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 2/170 (1%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E + L +L E R ERF V+ NR+ + +V E + N SA RS + GVQ +HV+
Sbjct: 12 EYLAYLETFLTENRVERFKEVLSNRTNHITVVAEDVYQLHNTSAVMRSCEVFGVQGLHVI 71
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR ++ +++GAEKW+DI +++ + + ++++GY+I T A S+ D
Sbjct: 72 EQKFGKRI--DKQIALGAEKWVDIHRYNSVQGSIDAIKAKGYKIVATTPHGTAQSLDKFD 129
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
S P AI G E G+S E + +D +IPM G +S N+SV+A I++
Sbjct: 130 LSEPVAIFFGTEKSGLSPEIIEQADDYITIPMVGFTESLNISVSAAIIIQ 179
>gi|402832581|ref|ZP_10881221.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. CM59]
gi|402276564|gb|EJU25670.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. CM59]
Length = 219
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 4/213 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L ++ ERKERF ++ NR+ + +E + N SA R+ + GVQ+ H++
Sbjct: 11 LEDFITHERKERFTEILSNRTQHFTVAIEDIFQMHNASAVIRTCEVFGVQTAHMIEEKYG 70
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR + ++MGAEKW+ + + C + L+++GY+I T A+ + + D + +
Sbjct: 71 KRL--DAKIAMGAEKWVTTHRYAQVQPCIDTLKAQGYQIVATLPAPTAVPLQEFDITPKS 128
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
A G E G+S + +S +D+ +IPM G +S N+SV+ I++ + R N
Sbjct: 129 AFFFGTERDGLSQQVISQADVFLTIPMVGFTESLNISVSVAIILQYLTTK--LRSSALNW 186
Query: 318 DLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
L+ EE+ +L +++ +S ++ Y K
Sbjct: 187 QLSEEEQLLLRLQWTKNSIRSLTDVLSRYYSLK 219
>gi|365960229|ref|YP_004941796.1| putative tRNA/rRNA methyltransferase [Flavobacterium columnare ATCC
49512]
gi|365736910|gb|AEW86003.1| putative tRNA/rRNA methyltransferase [Flavobacterium columnare ATCC
49512]
Length = 225
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 4/169 (2%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E L ++ + RKE F V+ NR+ +V E + N SA RS + G+Q ++VV
Sbjct: 11 LEYLETFITKNRKEGFKKVLANRTKHFTVVCEDVYQLHNTSAVMRSCEVFGIQELNVVEQ 70
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYR-IATTHVGMDAISVYDMDW 253
K+ ++ +++GAEKW+DI+ + ++C N LR+RGY+ IATT D++ + D D
Sbjct: 71 RFGKKI--DKEIALGAEKWVDIKRFSNNQDCINNLRTRGYQIIATTPHEKDSM-LEDFDI 127
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
S P+AI G E G+SDE + +D IPM G +S N+SV+A I++
Sbjct: 128 SKPSAIYFGTERLGISDEVIKNADGFLKIPMVGFTESLNISVSAAIIIQ 176
>gi|260770799|ref|ZP_05879728.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio furnissii CIP
102972]
gi|260614036|gb|EEX39226.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio furnissii CIP
102972]
Length = 228
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R V+K R + + +E + NVSA R+ADA+G+ +H V +++ R
Sbjct: 4 DRYARIQEVLKARQTDLTVCLEEVHKPNNVSAVIRTADAVGLHKIHAVW--PNEQMRTLT 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+++E ++ + L+++G ++ T++ DA+ D+D++ PTAI+VG+E
Sbjct: 62 HTSAGARNWVEVETHNSTLDAIKTLKAQGMQVLVTNLSDDAVDFRDIDYTQPTAIIVGSE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G+S +AL+L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KVGISKQALALADQDIVIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|375129669|ref|YP_004991767.1| tRNA guanosine-2'-O-methyltransferase [Vibrio furnissii NCTC 11218]
gi|315178841|gb|ADT85755.1| tRNA guanosine-2'-O-methyltransferase [Vibrio furnissii NCTC 11218]
Length = 228
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R V+K R + + +E + NVSA R+ADA+G+ +H V +++ R
Sbjct: 4 DRYARIQEVLKARQTDLTVCLEEVHKPNNVSAVIRTADAVGLHKIHAVW--PNEQMRTLT 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+++E ++ + L+++G ++ T++ DA+ D+D++ PTAI+VG+E
Sbjct: 62 HTSAGARNWVEVETHNSTLDAIKTLKAQGMQVLVTNLSDDAVDFRDIDYTQPTAIIVGSE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G+S +AL+L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KVGISKQALALADQDIVIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|399028131|ref|ZP_10729434.1| rRNA methylase [Flavobacterium sp. CF136]
gi|398074208|gb|EJL65359.1| rRNA methylase [Flavobacterium sp. CF136]
Length = 221
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L L + RKERF+NV+ NR+ + VE + N SA RS + G+Q ++V+
Sbjct: 10 LENILTDNRKERFLNVLANRTKHFTIAVEDVFQMHNTSAVMRSCEVFGIQELNVIEQRYG 69
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR ++ ++MGA+KW+DI +D+ C + L+++GY+I T + + D D + P+
Sbjct: 70 KRI--DKEIAMGAQKWVDINQFDSITNCLSTLKNQGYQIIATTPHENDCLLEDFDITKPS 127
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
A+ G E G+S E L +D IPM G +S N+SV+A I++ +
Sbjct: 128 ALFFGTERDGLSQEILDKADGFLKIPMVGFTESLNISVSAAIIIQN 173
>gi|239828668|ref|YP_002951292.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. WCH70]
gi|239808961|gb|ACS26026.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. WCH70]
Length = 237
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ ER +R +V++ R+ + ++ E + D N +A R+A+A GVQ V+VV+ + ++
Sbjct: 30 ILPERLKRMYDVLQKRTRYITVLTEAVDDPHNQAAVLRTAEAFGVQDVYVVTGKAP--FQ 87
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N V+ A+KWL ++ L+++GY++ +++G + + D+D S PTA++
Sbjct: 88 PNPLVTRHADKWLTLQQKPDIVTTIKELQAKGYQVYASYLGEGTLRLGDIDVSRPTALLF 147
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GVS EA+ +D IPM G V SFN+SVAA + ++ V +RA + G L
Sbjct: 148 GNEHSGVSQEAIRAADATFMIPMYGFVQSFNISVAAALALYD-VTERARQQAGERYYLPF 206
Query: 322 EEKQILLAEF 331
+EK+ L ++
Sbjct: 207 QEKKELFEKW 216
>gi|297620440|ref|YP_003708577.1| rRNA methylase, SpoU family [Waddlia chondrophila WSU 86-1044]
gi|297375741|gb|ADI37571.1| putative rRNA methylase, SpoU family [Waddlia chondrophila WSU
86-1044]
Length = 225
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 15/217 (6%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
L + ++E LSPYL +ERK + VVK R S+ E SD N A R+A+ALG+
Sbjct: 14 LGAKTIIEKLSPYLTDERKRKIDPVVKYRIQSIQTAAEAPSDIHNALAMVRTAEALGLTD 73
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRS--RGYRI--ATTHVGMD 244
H++ R R G+++W+++ + + +G+ I AT H G
Sbjct: 74 AHLIG---KPRKGRGRQTMRGSDRWMNLH----SHSSLDTFQKSMKGFVIYGATPH-GNT 125
Query: 245 AISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+ +D C + GNE G++D AL++ +IPM G +SFN+SVAA I +HHA
Sbjct: 126 PLHALSLDRPC--CFLFGNEKNGLTDAALNICTSHFTIPMYGFCESFNLSVAAAITLHHA 183
Query: 305 VCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAIS 341
V ++ +L+ GDL+ EEKQ +A F + + +S
Sbjct: 184 VTEK-RKLLASPGDLSIEEKQAEIAWFYFKSAGKQLS 219
>gi|397690903|ref|YP_006528157.1| tRNA guanosine-2'-O-methyltransferase [Melioribacter roseus P3M]
gi|395812395|gb|AFN75144.1| tRNA guanosine-2'-O-methyltransferase [Melioribacter roseus P3M]
Length = 196
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
+ + E R ++ ++NR +S+ +V+E + D NVSA FR+ DA+GV V ++
Sbjct: 1 MRKFRTESRIKKISETIRNRQFSLRVVIENVHDPHNVSAVFRTCDAVGVPKVSLIYT-VE 59
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
+ + ++ S A KW++ E +++ +E + L G+++ +++ +AI++YD+D +
Sbjct: 60 EFPKISKVTSASANKWIETEKFNSIQEGIDSLHKEGFKVYASYLDKNAINLYDLDLTGKV 119
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
A+V GNE+RG+S+E +D IPM GM+ S N+SVAA + ++ A R + +
Sbjct: 120 ALVFGNEHRGISEEMKEQADGLFYIPMYGMIQSLNISVAAAVTLYEAQRQRKVKGMYDKS 179
Query: 318 DLTSEEKQILLAEF 331
+LT EE L+ ++
Sbjct: 180 ELTEEEINKLIDDW 193
>gi|444916677|ref|ZP_21236790.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Cystobacter fuscus DSM
2262]
gi|444711962|gb|ELW52895.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Cystobacter fuscus DSM
2262]
Length = 229
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L++ RKE+ V+ R+ + +V++ L D N++A R+ +A G+Q VHV+ + + +
Sbjct: 22 LLDVRKEKIDKVISQRTRTFTIVLDRLEDSFNMAAVMRTCEANGLQEVHVI-VNPAAPFM 80
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N V+ G +KWLD++++ C L++RG+ + + + DA S+Y M + A++
Sbjct: 81 PNSRVAQGCDKWLDVKIYRDFASCRAALKARGFSLYASAIREDATSLYSMRFDSKIALIF 140
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE GVS E L+ SD IPM+G S N+S AA + A+ R L G GDLT
Sbjct: 141 GNERDGVSPEVLAGSDGTFWIPMRGFSQSLNISAAASACVTRAISWREEHL-GRVGDLTE 199
Query: 322 EEKQILLAEF 331
E Q L F
Sbjct: 200 GEAQELRERF 209
>gi|260063174|ref|YP_003196254.1| spoU protein [Robiginitalea biformata HTCC2501]
gi|88783268|gb|EAR14440.1| spoU protein [Robiginitalea biformata HTCC2501]
Length = 217
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 111/217 (51%), Gaps = 8/217 (3%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
++E L +L E+R+ RF+ V+ NR+ + + ++ + N SA RS D G+Q H++
Sbjct: 5 LLEYLEEFLTEQRRNRFLEVLANRTRYITVALQDVYQLHNASAVIRSCDIFGIQDAHLIE 64
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
R +N ++MGA++W+DI + + C + LR +GYRI T ++S +
Sbjct: 65 ERFGNRLDKN--IAMGAQRWVDIHRYKSTDACVHALREKGYRIVATSPHQGSVSPEALPL 122
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
P A+ G E G+S+ + +D IPM G +S NVSVAA I++ + TRL
Sbjct: 123 DTPVAVFFGTEKEGLSEGLIRQADAAIQIPMVGFTESLNVSVAAAIVLR----ELGTRLR 178
Query: 314 GCNGDLTSEEKQIL--LAEFSLRHSKSAISIVHEYAK 348
E +IL +++ + KSA I+ Y +
Sbjct: 179 KSELPWRLTEAEILEKRLDWAQKTIKSAPEIIAHYRR 215
>gi|371777919|ref|ZP_09484241.1| tRNA/rRNA methyltransferase SpoU [Anaerophaga sp. HS1]
Length = 240
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 8/225 (3%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E++ LS +L ER F V++ R+ + +VVE + + N+SA RS D G+Q +H++
Sbjct: 18 ELIRYLSDFLTPERFRLFEKVLQCRTNYLTVVVENIFNPHNISAVLRSCDCFGIQDIHII 77
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELW-----DAPRECFNVLRSRGYRIATTHVGMDAIS 247
D ++ Y N +++GA KWL I + ++ + N L+S+ YRI T A++
Sbjct: 78 --DDNQNYEVNPEIALGAFKWLSIHKYSQGMGNSSQFVLNELKSKKYRIFATVPDHKAVA 135
Query: 248 VYDMDWS-CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVC 306
++D S P A+V GNE G+SD L+D +IPM G +S N+SVAA I++ H
Sbjct: 136 FSEIDVSKGPIALVFGNEKEGISDSTRELADGLITIPMVGFTESLNISVAAAIMLQHFSS 195
Query: 307 DRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
L +L ++ ++ LL + + K A I + K+++
Sbjct: 196 HIRKYLDKSVWELDNDYREQLLLNWMRKTIKKADLIEKAFNKKQK 240
>gi|337293776|emb|CCB91762.1| putative rRNA methylase, SpoU family [Waddlia chondrophila 2032/99]
Length = 225
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 15/217 (6%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
L + ++E LSPYL +ERK + VVK R S+ E SD N A R+A+ALG
Sbjct: 14 LGAKTIIEKLSPYLTDERKRKIDPVVKYRIQSIQTAAEAPSDIHNALAMVRTAEALGFTD 73
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRS--RGYRI--ATTHVGMD 244
H++ R R G+++W+++ + + +G+ I AT H G
Sbjct: 74 AHLIG---EPRKGRGRQTMRGSDRWMNLH----SHSSLDTFQKSMKGFVIYGATPH-GNT 125
Query: 245 AISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+ +D C + GNE G++D AL++ +IPM G +SFN+SVAA I +HHA
Sbjct: 126 PLHALSLDRPC--CFLFGNEKNGLTDAALNICTSHFTIPMYGFCESFNLSVAAAITLHHA 183
Query: 305 VCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAIS 341
V ++ +L+ GDL+ EEKQ +A F + + +S
Sbjct: 184 VTEK-RKLLASPGDLSIEEKQAEIAWFYFKSAGKQLS 219
>gi|423684839|ref|ZP_17659647.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri SR5]
gi|371495886|gb|EHN71480.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri SR5]
Length = 229
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +V+K R + L +E + NVSA R+ADA G+ +H V +++ +
Sbjct: 4 ERYQRITSVLKARQTDLTLCLEEVHKANNVSAIVRTADATGIHKIHAVW--PTEQMQMLG 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+D+E + F L+ +G +I T++ A+ ++D++ PTAI++G+E
Sbjct: 62 HTSAGARNWVDVETHKNIEDAFATLKEQGMQILATNLSDTAVDFREIDYTKPTAIILGSE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G+S +AL+++D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KTGISKKALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|429751552|ref|ZP_19284465.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
326 str. F0382]
gi|429180497|gb|EKY21717.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon
326 str. F0382]
Length = 220
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 112/215 (52%), Gaps = 4/215 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L ++ EERKERF+ ++ R+ + +E + N SA R+ + GVQ H +
Sbjct: 9 LERFITEERKERFLEIIAQRTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIEGRFG 68
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR + ++MGA+KW+D+ ++ + C + LR++GY+I T DA + D D + +
Sbjct: 69 KRL--DAKIAMGAQKWVDVFRYNDTQSCIDTLRAQGYQIVATTPHKDAYFLNDFDITKKS 126
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
A G E G+S + LS +D IPM G +S N+SVA I++ + D+ R
Sbjct: 127 AFFFGTEKEGLSAQVLSQADTFLKIPMVGFTESLNISVAVAIVLQQ-LTDKLRR-SEIAW 184
Query: 318 DLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKET 352
L+ EE+ L ++ + ++ ++ Y + K+T
Sbjct: 185 QLSDEERLNTLIHWTKQSIRNVNDVLTRYEEIKDT 219
>gi|59710710|ref|YP_203486.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri ES114]
gi|59478811|gb|AAW84598.1| tRNA (Guanosine-2'-O-)-methyltransferase [Vibrio fischeri ES114]
Length = 229
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +V+K R + L +E + NVSA R+ADA G+ +H V +++ +
Sbjct: 4 ERYQRITSVLKARQTDLTLCLEEVHKANNVSAIVRTADATGIHKIHAVW--PTEQMQMLG 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+D+E + F L+ +G +I T++ A+ ++D++ PTAI++G+E
Sbjct: 62 HTSAGARNWVDVETHKNIEDAFATLKEQGMQILATNLSDTAVDFREIDYTKPTAIILGSE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G+S +AL+++D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KTGISKKALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|428768764|ref|YP_007160554.1| tRNA guanosine-2'-O-methyltransferase [Cyanobacterium aponinum PCC
10605]
gi|428683043|gb|AFZ52510.1| tRNA guanosine-2'-O-methyltransferase [Cyanobacterium aponinum PCC
10605]
Length = 233
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 9/171 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R E+ +++ R + L+ + +++F N+SA RS +A+G VH+V+ K Y N+
Sbjct: 5 RLEKIKRILQRRQPDLTLITDNVNNFRNLSAIIRSCEAVGTMEVHLVNNQQEKLYLINK- 63
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVG--------MDAISVYDMDWSCPT 257
V+ GAE+WL + N L+ RG+ I TH+G + + MD++ PT
Sbjct: 64 VTAGAERWLTQTRHSSIVTGINHLKKRGFTIYATHLGDPEGICCAVRTLDYRKMDYTKPT 123
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
A VVG+E +G+S+EAL +D SIPM GM S NVSVA I++ A R
Sbjct: 124 AFVVGSEKKGISEEALENADYHISIPMMGMTQSLNVSVATAIILFEAQRQR 174
>gi|78185144|ref|YP_377579.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. CC9902]
gi|78169438|gb|ABB26535.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. CC9902]
Length = 229
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+ +R + +++E + N+SA RS DA+G H VS S R R
Sbjct: 3 LLPRRFERLKSVLNHRMADLTVLLEHVEKPHNLSAILRSCDAVGALEAHAVSF--SGRPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAP--RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
+ G++KW + L D P VL+++G+R+ TH+G +A D D++ PTA
Sbjct: 61 TYNSTAQGSQKW--VPLNDHPDIETAIKVLKAKGFRLYGTHLGTNAKDYRDCDFTGPTAF 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD 318
V+G E G+SD+A L D IPM+GMV S NVSVA L+ ++ R A + +G+
Sbjct: 119 VLGAEKWGLSDQARDLMDEALFIPMRGMVQSLNVSVATATLLFESLRQRQAAGVAPSHGE 178
Query: 319 -LTSEEKQILLAEFS 332
LT+E Q LL E+S
Sbjct: 179 GLTAEHYQQLLVEWS 193
>gi|318040451|ref|ZP_07972407.1| tRNA/rRNA methyltransferase [Synechococcus sp. CB0101]
Length = 231
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 93/167 (55%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER V+ R + +V+E + N+SA R+ DA+GV HVVS R R
Sbjct: 3 LLPRRFERLQAVLNRRMGDLTVVLEAVDKPHNLSAILRTCDAVGVLEAHVVSLPG--RPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + + C N L+ +G+RI TH+ +DA D D++ P+ ++
Sbjct: 61 TFNKTAKGSQKWVPLHPHPSIETCLNGLKEKGFRIYGTHLSVDARDYRDCDFTGPSCFLM 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E G+SDEAL++ D IPM GMV S NVSVAA L+ A+ R
Sbjct: 121 GAEKWGMSDEALAMVDQPLFIPMTGMVQSLNVSVAAATLLFEALRQR 167
>gi|343501550|ref|ZP_08739424.1| tRNA guanosine-2'-O-methyltransferase [Vibrio tubiashii ATCC 19109]
gi|418481554|ref|ZP_13050589.1| tRNA guanosine-2'-O-methyltransferase [Vibrio tubiashii NCIMB 1337
= ATCC 19106]
gi|342817595|gb|EGU52473.1| tRNA guanosine-2'-O-methyltransferase [Vibrio tubiashii ATCC 19109]
gi|384570811|gb|EIF01362.1| tRNA guanosine-2'-O-methyltransferase [Vibrio tubiashii NCIMB 1337
= ATCC 19106]
Length = 227
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 8/212 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ +H V + R
Sbjct: 4 ERYNRIQEVLKARQADLTLCLEEVHKPNNVSAVIRTADATGIHKIHAVWPNE---MRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+D+E D+ E L+++G ++ T++ A+ D+D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVDVETHDSIDEAITELKAQGMQVLVTNLSETAVDFRDIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G S++A L+D +PM GMV S NVSVA+ ++++ A R + N + E+
Sbjct: 121 KVGASEQAKKLADQDIIVPMVGMVQSLNVSVASAVILYEAQRQREAAGMYDNEVSSVPEE 180
Query: 325 QILLAEFSLRHSKSAISIVHEYAKRKETTHMP 356
I F H ++ + AKRK+ + P
Sbjct: 181 TIHRLLFERGH-----PVLAKVAKRKKLPYPP 207
>gi|197334204|ref|YP_002154872.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri MJ11]
gi|197315694|gb|ACH65141.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri MJ11]
Length = 229
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +V+K R + L +E + NVSA R+ADA G+ +H V +++ +
Sbjct: 4 ERYKRITSVLKARQTDLTLCLEEVHKANNVSAIVRTADATGIHKIHAVW--PTEQMQMLG 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+D+E + F L+ +G +I T++ A+ ++D++ PTAI++G+E
Sbjct: 62 HTSAGARNWVDVETHKNIEDAFATLKEQGMQILATNLSDTAVDFREIDYTKPTAIILGSE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G+S +AL+++D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KTGISKKALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|15606763|ref|NP_214143.1| rRNA methylase SpoU [Aquifex aeolicus VF5]
gi|3915169|sp|O67577.1|TRMH_AQUAE RecName: Full=tRNA (guanosine(18)-2'-O)-methyltransferase; AltName:
Full=tRNA [Gm18] methyltransferase
gi|75765771|pdb|1ZJR|A Chain A, Crystal Structure Of A. Aeolicus TrmhSPOU TRNA MODIFYING
ENZYME
gi|2983982|gb|AAC07528.1| rRNA methylase SpoU [Aquifex aeolicus VF5]
Length = 211
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++E+R +R V++ R + + + + + N SA R+ DA+GV ++ + K+ +
Sbjct: 7 VLEKRLKRLREVLEKRQKDLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHAEG-KKAK 65
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N ++ G+ KW+ IE D P + ++RG++I T + ++++ ++D++ PT +VV
Sbjct: 66 INEGITQGSHKWVFIEKVDNPVQKLLEFKNRGFQIVATWLSKESVNFREVDYTKPTVLVV 125
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE +GVS E + ++D + IPM GM S NVSVA GI+++ A R + + L+
Sbjct: 126 GNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQREEKGMYSRPSLSE 185
Query: 322 EEKQILLAEFS 332
EE Q +L +++
Sbjct: 186 EEIQKILKKWA 196
>gi|323494590|ref|ZP_08099694.1| tRNA guanosine-2'-O-methyltransferase [Vibrio brasiliensis LMG
20546]
gi|323311193|gb|EGA64353.1| tRNA guanosine-2'-O-methyltransferase [Vibrio brasiliensis LMG
20546]
Length = 227
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ +H V + R
Sbjct: 4 ERYNRIQQVLKARQADLTLCLEEVHKPNNVSAVIRTADATGIHKIHAVWPNE---MRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+D+E D+ E L+S+G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVDVETHDSIEEAITELKSQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G S++A L+D IPM GMV S NVSVA+ ++++ A R + N + E+
Sbjct: 121 KVGASEKAKQLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQRQAAGMYDNETSSVPEE 180
Query: 325 QILLAEFSLRHSKSAISIVHEYAKRKETTHMP 356
I F H ++ + AKRK + P
Sbjct: 181 TIHRLLFERGH-----PVLAKVAKRKGLAYPP 207
>gi|319951639|ref|YP_004162906.1| tRNA/rRNA methyltransferase (spou) [Cellulophaga algicola DSM
14237]
gi|319420299|gb|ADV47408.1| tRNA/rRNA methyltransferase (SpoU) [Cellulophaga algicola DSM
14237]
Length = 235
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 128 YLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQ 187
++ +++ L ++ EERK+RF+ V+ R+ + + VE + N SA RS D G+Q
Sbjct: 19 FMIDLKLLNYLEEFISEERKQRFIQVLAERTNKITVAVEDVFQMHNTSAVVRSCDIFGIQ 78
Query: 188 SVHVVSCDSSKRYRE--NRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDA 245
H++ ++Y + + ++MG++KW+DI +++ + C + L+ GY+I T D+
Sbjct: 79 EAHLIE----RKYGDQLDSQIAMGSQKWVDIHRYESTKNCMDTLKQNGYKIIATTPHNDS 134
Query: 246 ISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
+ D + A+ G E G+S+E L +D IPM G +S N+SV+A I++
Sbjct: 135 CLLEDFEIEGKIALFFGTERNGLSEEVLKNADGFLKIPMVGFTESLNISVSAAIILQSL- 193
Query: 306 CDRATRLVGCNGD--LTSEEKQILLAEFSLRHSKSAISIVHEYA 347
T+L + D LT EK I ++S + KS ++ Y
Sbjct: 194 ---TTKLKKESTDWQLTDHEKLIKKIDWSKKSIKSIEGVLSRYV 234
>gi|381187806|ref|ZP_09895368.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Flavobacterium
frigoris PS1]
gi|379649594|gb|EIA08167.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Flavobacterium
frigoris PS1]
Length = 220
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 113/198 (57%), Gaps = 12/198 (6%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L L + RKE+F+ V++NR+ + VE + N SA RS + G+Q ++V+
Sbjct: 10 LENILTDNRKEKFLKVLENRTNHFTIAVEDIFQMHNTSAVMRSCEVFGIQELNVIE---- 65
Query: 198 KRYRE--NRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAISVYDMDWS 254
+RY + ++ ++MGA+KW+DI +D+ +C + L+++GY+I ATT D + + D D +
Sbjct: 66 QRYGKSIDKEIAMGAQKWVDINTYDSITDCVDTLKNKGYQIIATTPHDTDCL-MDDFDIT 124
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
P+A+ G E G+S+E L +D IPM G +S N+SV+A I++ + RL
Sbjct: 125 KPSALFFGTERDGLSEEILLRADGFLKIPMVGFTESLNISVSAAIIIQNL----TNRLRN 180
Query: 315 CNGDLTSEEKQILLAEFS 332
+ D E++IL+ +
Sbjct: 181 SDIDWHLSEEEILIKRLA 198
>gi|408370412|ref|ZP_11168189.1| tRNA guanosine-2'-O-methyltransferase [Galbibacter sp. ck-I2-15]
gi|407744170|gb|EKF55740.1| tRNA guanosine-2'-O-methyltransferase [Galbibacter sp. ck-I2-15]
Length = 218
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 97/170 (57%), Gaps = 2/170 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
+++ L+ ++ ER+ER +V++ R+ + + +E + N SA RS D G+Q ++V+
Sbjct: 3 LIDYLNGFVTPERRERIEHVLERRTNHIAVCIEDVYQLHNTSAVLRSCDVFGIQQLYVIE 62
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
KR +N ++MG+EKW+D+ +D ++C + LRS GY+I T + + D D
Sbjct: 63 EQFGKRLDKN--IAMGSEKWVDVHRFDTAKQCIDRLRSDGYKIIATTPLKTSAPLEDFDI 120
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
S + I G E G+S + +D IPM+G +S N+SV+A I++H
Sbjct: 121 SEKSVICFGTEKSGLSSAIMDQADGYIHIPMEGFSESLNISVSAAIILHQ 170
>gi|343085786|ref|YP_004775081.1| tRNA/rRNA methyltransferase SpoU [Cyclobacterium marinum DSM 745]
gi|342354320|gb|AEL26850.1| tRNA/rRNA methyltransferase (SpoU) [Cyclobacterium marinum DSM 745]
Length = 230
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
LS Y+ +K V+ R+ + LV+E + N SA R+AD G+Q VHV+ D+S
Sbjct: 15 LSDYVTPHKKALIDKVLGERTRYITLVLENIYKPHNASAVLRTADCFGIQDVHVIEGDNS 74
Query: 198 KRYRENRHVSMGAEKWLDIELWD-----APRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
Y N +V+ GA +W+D+ +D A +C L+ GY++ T ++ V D+
Sbjct: 75 --YDINPYVTRGAAQWVDLHKYDNASGNATEDCIKQLKHNGYKVVVTSPREGSLPVSDLP 132
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
P A++ GNE+ GVS A+ +D IPMKG +SFN+SV+A I + +A+ ++
Sbjct: 133 IDQPLALIFGNEHEGVSQAAMEAADGLVHIPMKGFTESFNISVSAAICL-YALQEKIGGE 191
Query: 313 VGCNGDLTSEEK 324
N L EEK
Sbjct: 192 SMDNYSLNEEEK 203
>gi|323497036|ref|ZP_08102059.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sinaloensis DSM
21326]
gi|323317880|gb|EGA70868.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sinaloensis DSM
21326]
Length = 227
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K+R + L +E + NVSA R+ADA G+ +H V + R
Sbjct: 4 ERYNRIQEVLKSRQADLTLCLEEVHKPNNVSAVIRTADATGIHKIHAVWPN---EMRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+D+E D+ E + L+S+G ++ T++ A+ +D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVDVETHDSIEEAISELKSQGMQVLVTNLSDSAVDFRQIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D +PM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIVPMVGMVQSLNVSVASAVILYEAQRQR 164
>gi|340622431|ref|YP_004740883.1| putative tRNA/rRNA methyltransferase [Capnocytophaga canimorsus
Cc5]
gi|339902697|gb|AEK23776.1| Putative tRNA/rRNA methyltransferase [Capnocytophaga canimorsus
Cc5]
Length = 241
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 4/219 (1%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
++++ L ++ E RK RF ++ R+ + VE + N SA RS + GVQ H++
Sbjct: 27 QLLKYLQNFITEARKVRFEEILNQRTNHFTVAVEDVFQMHNTSAVVRSCEVFGVQQAHLI 86
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR E ++MGA+KW+D ++ + C + LR++GY+I T DA + D D
Sbjct: 87 ERRYGKRLDEK--IAMGAQKWVDTFRYENTQSCIDTLRAKGYQIVATTPHQDAYLLDDFD 144
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
+A G E G+SD L +D IPM G +S N+SV+A I++ + R
Sbjct: 145 IVPKSAFFFGTEREGLSDTVLQQADTFLKIPMVGFTESLNISVSAAIILQQ--LTQRLRK 202
Query: 313 VGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
L+ +E L E++ + +S ++ Y + K+
Sbjct: 203 SEVVWQLSQQEANTLRLEWTKQSVRSINDVLKRYEQMKK 241
>gi|116072278|ref|ZP_01469545.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. BL107]
gi|116064800|gb|EAU70559.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. BL107]
Length = 229
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+ +R + +++E + N+SA RS DA+G H VS S R R
Sbjct: 3 LLPRRFERLKSVLNHRMADLTVLLEHVEKPHNLSAILRSCDAVGALEAHAVSF--SGRPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAP--RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
+ G++KW + L D P VL+++G+R+ TH+G +A D D++ PTA
Sbjct: 61 TYNSTAQGSQKW--VPLNDHPDIETAIKVLKAKGFRLYGTHLGTNARDYRDCDFTGPTAF 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD 318
V+G E G+SD+A L D IPM+GMV S NVSVA L+ ++ R A + G+
Sbjct: 119 VLGAEKWGLSDQARDLMDEALFIPMRGMVQSLNVSVATATLLFESLRQRQAAGVAPSRGE 178
Query: 319 -LTSEEKQILLAEFS 332
LT+E Q LL E+S
Sbjct: 179 GLTAEHYQRLLLEWS 193
>gi|326336260|ref|ZP_08202431.1| tRNA/rRNA methyltransferase [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691434|gb|EGD33402.1| tRNA/rRNA methyltransferase [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 221
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 4/214 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L ++ +ERKERF ++ R+ + +E + N SA R+ + GVQ+ H++
Sbjct: 11 LEGFITQERKERFSQILAQRTQYFTVAIEDIFQMHNTSAVVRTCEVFGVQTTHIIEKKYG 70
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR + ++MGAEKW+ I+ + + C L+ +GYRI T AI + + +
Sbjct: 71 KRL--DSKIAMGAEKWVTIKRYSNTQSCIEELKLQGYRIVATVPAPSAIPLEHFNIDAKS 128
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
A G E G+S E +S +D +IPM G +S N+SV+ I++ + R N
Sbjct: 129 AFFFGTERDGLSQEVISQADEFLTIPMVGFTESLNISVSVAIILQY--LTNKLRKSSINW 186
Query: 318 DLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
L+ EE+ +L +++ +S ++ Y K+
Sbjct: 187 RLSKEEELLLQLQWTKNSVRSLTDVLSRYYSTKK 220
>gi|109698962|gb|ABG38882.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas
atlantica T6c]
Length = 256
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 137 ALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDS 196
A++P + ER +R ++ R S+ + +E + NVSA RS DA+G+ +H V D
Sbjct: 3 AIAP-MSVERYQRIRKLLSTRQPSLTVCLEQVHKPHNVSAVLRSCDAVGINRIHGV-WDQ 60
Query: 197 SKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP 256
+ R+ +MG+E W+ E+ + + +VL+ + ++ TH+ D++ D+D++ P
Sbjct: 61 KTKIRKG--TAMGSEHWVKTEMHTSIGDAVSVLKQQNMQVLVTHLSDDSVDFRDIDYTQP 118
Query: 257 TAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCN 316
TAI++G E G ++EA++++D IPM GMV S NVSVAA ++++ A R + +
Sbjct: 119 TAIILGQEKHGATEEAIAVADKNIVIPMVGMVQSLNVSVAAAVVLYEAQRQREVAGMYNS 178
Query: 317 GDLTSEEKQILLAE 330
L+ EE Q +L E
Sbjct: 179 LQLSEEECQRVLFE 192
>gi|187917931|ref|YP_001883494.1| tRNA (guanosine-2'-O-)-methyltransferase [Borrelia hermsii DAH]
gi|119860779|gb|AAX16574.1| tRNA (guanosine-2'-O-)-methyltransferase [Borrelia hermsii DAH]
Length = 227
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 118 YLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSAT 177
YL Y D + + + LS ++ ++R+ER V+ NR+ + LV+E + N SAT
Sbjct: 4 YLKLYFVSD---DTFKRIAILSEFITQKRRERINEVLNNRTNYLTLVLEDIFQPQNASAT 60
Query: 178 FRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIA 237
R+ + LG+ ++H++ +++ +Y N V +GA KW+DI + + F+ L+ GY+I
Sbjct: 61 MRTIEILGLSNIHII--ETNNKYTLNPGVVLGASKWIDIIKYKCVKAAFDNLKGNGYKIV 118
Query: 238 TTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAA 297
T + AIS+ D AI G E G+S L +DL IPM G S+N+SVA
Sbjct: 119 ATSLDNKAISLEDFPIDAKLAIFFGTELTGLSHSVLENADLHLKIPMYGFTQSYNLSVAV 178
Query: 298 GILMHHAV 305
I+ + +
Sbjct: 179 AIVFYSLI 186
>gi|383450072|ref|YP_005356793.1| tRNA/rRNA methyltransferase [Flavobacterium indicum GPTSA100-9]
gi|380501694|emb|CCG52736.1| Probable tRNA/rRNA methyltransferase [Flavobacterium indicum
GPTSA100-9]
Length = 223
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
+++E L ++ E RK F+ V+KNR+ + + +E + N SA RS + GVQ
Sbjct: 5 FEKEKLLEYLEGFITENRKNGFLKVLKNRTKHLTIAMEDVYQLHNTSAVMRSCEVFGVQE 64
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
+HV+ KR ++ +++GAEKW+DI + + C + L+++GY+I T D+ +
Sbjct: 65 LHVIEQRFGKRI--DKEIALGAEKWVDINRFSTIQNCIDDLKNKGYQIIATTPHNDSCLL 122
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
D + +AI G E G+S+E + +D IPM G +S N+SV+A I++
Sbjct: 123 DAFDITQKSAIFFGTEKLGLSEEVMQQADGFLKIPMVGFTESLNISVSAAIVIQ 176
>gi|410629046|ref|ZP_11339760.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola mesophila KMM
241]
gi|410151415|dbj|GAC26529.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola mesophila KMM
241]
Length = 256
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 137 ALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDS 196
A++P + ER +R ++ R S+ + +E + NVSA RS DA+G+ +H V D
Sbjct: 3 AIAP-MSVERYQRIRKLLTTRQPSLTVCLEQVHKPHNVSAVLRSCDAVGINRIHGV-WDQ 60
Query: 197 SKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP 256
+ R+ +MG+E W+ ++ + + +VL+ + ++ TH+ D++ ++D++ P
Sbjct: 61 KTKIRKG--TAMGSEHWVKTDMHTSIGDAVSVLKQQNMQVLVTHLSDDSVDFREIDYTQP 118
Query: 257 TAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCN 316
TAI++G E G ++EA+SL+D IPM GMV S NVSVAA ++++ A R +
Sbjct: 119 TAIILGQEKHGATEEAISLADKNIVIPMVGMVQSLNVSVAAAVVLYEAQRQREVAGMYAI 178
Query: 317 GDLTSEEKQILLAE 330
L+ EE Q +L E
Sbjct: 179 QQLSEEECQRVLFE 192
>gi|336173167|ref|YP_004580305.1| tRNA/rRNA methyltransferase SpoU [Lacinutrix sp. 5H-3-7-4]
gi|334727739|gb|AEH01877.1| tRNA/rRNA methyltransferase (SpoU) [Lacinutrix sp. 5H-3-7-4]
Length = 220
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 4/193 (2%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
+++E L YL + R +RF V++ R+ + E + N SA RS D G+Q V++
Sbjct: 4 KKLLEHLETYLTDHRLQRFYKVLEQRTKHFTVATEDVYQLHNTSAVIRSCDVFGIQEVNI 63
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
V ++KR +R ++MGA+KW+D+ + ++ ++ +GY++ T + ++ D
Sbjct: 64 VEEVNAKRI--DREIAMGAQKWVDLNRYHTVKDAIQDVKQKGYQVVATTPHANDCNLRDF 121
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D + + G E G+S E L +D+ IPM G +S N+SV+A I++ H + +
Sbjct: 122 DVTKKSCFFFGRETEGLSQEVLDEADVFLKIPMVGFTESLNISVSAAIILQHVTTE--LK 179
Query: 312 LVGCNGDLTSEEK 324
N LT EK
Sbjct: 180 QTNINWQLTETEK 192
>gi|317967917|ref|ZP_07969307.1| tRNA/rRNA methyltransferase [Synechococcus sp. CB0205]
Length = 238
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+ +R + +V+E + N+SA R+ DA+G HVVS R
Sbjct: 10 LLPRRFERLKSVLNHRMGDLTVVMEQVDKPHNLSAILRTCDAVGALEAHVVSLPGRPRTF 69
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N + G++KW+ + + C L+ +G+RI TH+ +DA+ D D++ P+ ++
Sbjct: 70 NN--TAKGSQKWVPLHPHPSIEGCLQGLKDKGFRIYGTHLSVDAVDYRDCDFTGPSCFLM 127
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E G+S+EAL+L D IPM GMV S NVSVAA L+ A+ R
Sbjct: 128 GAEKWGMSEEALALVDQPLFIPMTGMVQSLNVSVAAATLLFEALRQR 174
>gi|162382313|ref|YP_659936.2| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas atlantica
T6c]
Length = 250
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R ++ R S+ + +E + NVSA RS DA+G+ +H V D + R+
Sbjct: 4 ERYQRIRKLLSTRQPSLTVCLEQVHKPHNVSAVLRSCDAVGINRIHGV-WDQKTKIRKG- 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+E W+ E+ + + +VL+ + ++ TH+ D++ D+D++ PTAI++G E
Sbjct: 62 -TAMGSEHWVKTEMHTSIGDAVSVLKQQNMQVLVTHLSDDSVDFRDIDYTQPTAIILGQE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G ++EA++++D IPM GMV S NVSVAA ++++ A R + + L+ EE
Sbjct: 121 KHGATEEAIAVADKNIVIPMVGMVQSLNVSVAAAVVLYEAQRQREVAGMYNSLQLSEEEC 180
Query: 325 QILLAE 330
Q +L E
Sbjct: 181 QRVLFE 186
>gi|161761287|ref|YP_156756.2| tRNA guanosine-2'-O-methyltransferase [Idiomarina loihiensis L2TR]
Length = 226
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R ++ R + +V+E + N+SA RSADA+GV +H + +K+ R +
Sbjct: 4 ERYQRINQMLDKRQPDLTVVMENVHKNHNLSAVVRSADAIGVHEMHAIWL--TKKARLSG 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
++G++ W+ I E + RG ++ TH+ ++ ++D++ PTAI++G E
Sbjct: 62 GTALGSQNWVKIHNHKTVGEALEATQGRGMQVVVTHLSEHSVDFREVDYTKPTAILLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
GV+DEAL ++D IPM GMV S NVSVA ++++ A R + +++EE+
Sbjct: 122 KYGVTDEALDIADYHVMIPMVGMVQSLNVSVAGAVMLYEAQRQREQAGLYDKTHISAEER 181
Query: 325 QILLAE 330
+L E
Sbjct: 182 HRVLFE 187
>gi|332139565|ref|YP_004425303.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Deep ecotype']
gi|410859798|ref|YP_006975032.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii
AltDE1]
gi|327549587|gb|AEA96305.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Deep ecotype']
gi|410817060|gb|AFV83677.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii
AltDE1]
Length = 235
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 100/183 (54%), Gaps = 3/183 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +V++ R + + +E + NVSA R+ DA+G+ VH V K+Y+ R
Sbjct: 4 ERYQRIRDVLEKRQTDLTVCLENVHKPHNVSAIVRTCDAVGIHRVHTVW---EKKYQFRR 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+++W+ D + L+ +G ++ TH+ A+ D+D++ PTAI+ G E
Sbjct: 61 GTAMGSQQWVRQTNHDGINDAMAELKGQGMQVLVTHLSDTAVDFRDVDYTKPTAILFGQE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G +DEA +L+D IPM GMV S NVSVAA ++++ A R + L EE
Sbjct: 121 KYGATDEAKALADQDIVIPMMGMVQSLNVSVAAALVLYEAQRQRTIAGMYNTQQLPEEEC 180
Query: 325 QIL 327
Q L
Sbjct: 181 QAL 183
>gi|150025852|ref|YP_001296678.1| tRNA/rRNA methyltransferase [Flavobacterium psychrophilum JIP02/86]
gi|149772393|emb|CAL43873.1| Probable tRNA/rRNA methyltransferase [Flavobacterium psychrophilum
JIP02/86]
Length = 217
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 97/168 (57%), Gaps = 6/168 (3%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L L + RKE+F+ V++NR+ + VE + N SA RS + G+Q ++V+
Sbjct: 10 LENILTDNRKEKFLKVLENRTNHFTIAVEDIFQMHNTSAVMRSCEVFGIQELNVIE---- 65
Query: 198 KRYRE--NRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC 255
+RY + ++ ++MGA+KW+DI +D+ C L+++GY+I T + + D D S
Sbjct: 66 ERYGKSIDKEIAMGAQKWVDINTFDSVTNCIESLKNKGYQIIATTPHENDCLLEDFDISK 125
Query: 256 PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
P+A+ G E G+S+E L +D IPM G +S N+SV+A I++ +
Sbjct: 126 PSALFFGTERDGLSEEILKQADGFLKIPMVGFTESLNISVSAAIIIQN 173
>gi|406660260|ref|ZP_11068393.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Cecembia lonarensis
LW9]
gi|405555884|gb|EKB50869.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Cecembia lonarensis
LW9]
Length = 232
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 8/200 (4%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E + LS ++ + ++ R+ +V+E + N SA R+AD G+Q +HV+
Sbjct: 7 EFLTYLSDFITPHKTALIEEILNKRTRYFTVVLENIYKPHNASAVLRTADCFGLQDIHVI 66
Query: 193 SCDSSKRYRENRHVSMGAEKWLDI-----ELWDAPRECFNVLRSRGYRIATTHVGMDAIS 247
++S Y+ N +V+ GA +W+D+ E +A +CF LR GYRI T +I
Sbjct: 67 EKENS--YKINPYVTRGASQWVDLYKYSNESGNAVHDCFTTLRKGGYRIMATSPKAGSIP 124
Query: 248 VYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCD 307
+++++ A+V GNE+ GVS E L +D IPM G +SFN+SVAA I + +
Sbjct: 125 IHELEPDQKLALVFGNEHEGVSQEILEQADGLVHIPMYGFTESFNISVAASIFLFDLLNK 184
Query: 308 RATRLVGCNGDLTSEEKQIL 327
R + + LT +EK+ L
Sbjct: 185 VKAREI-PDFYLTEKEKETL 203
>gi|441505810|ref|ZP_20987790.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Photobacterium sp.
AK15]
gi|441426540|gb|ELR64022.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Photobacterium sp.
AK15]
Length = 235
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 100/173 (57%), Gaps = 4/173 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER ER +V+ R + + +E + NVSA R+ADA+GV VH V + R
Sbjct: 1 MTPERFERIQSVLATRQPDLTVCMEEVHKPNNVSAIIRTADAVGVHKVHAVWPEEGMRVL 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N S GA W+++E D+ + L+++G ++ T++ AI ++D++ PTAI++
Sbjct: 61 SN--TSAGARNWVELETHDSMVNAVSTLKTQGMQVLATNLSDTAIDFREVDYTKPTAIIL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
G E G++ EAL+L++ IPM GMV S NVSVA+ ++++ A R +L G
Sbjct: 119 GGEKNGITPEALALAEQDIIIPMVGMVQSLNVSVASALILYEA--QRQRQLAG 169
>gi|146302736|ref|YP_001197327.1| tRNA/rRNA methyltransferase SpoU [Flavobacterium johnsoniae UW101]
gi|146157154|gb|ABQ08008.1| tRNA/rRNA methyltransferase (SpoU) [Flavobacterium johnsoniae
UW101]
Length = 220
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L L + RKE+F+ V++NR+ + VE + N SA RS + G+Q ++++
Sbjct: 10 LEDILTDNRKEKFLKVLENRTKHFTIAVEDVYQMHNTSAVMRSCEVFGIQELNIIEQRFG 69
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR ++ +++GA+KW+DI +D C + LR +GY+I T + + D D S P+
Sbjct: 70 KRI--DKEIALGAQKWVDINRFDTVDGCISSLRDKGYQIIATTPHENDCLIQDFDISKPS 127
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
A+ G E G+S E L +D IPM G +S N+SV+A I++ +
Sbjct: 128 ALFFGTEKDGLSPEILEKADGFLKIPMVGFTESLNISVSAAIIIQN 173
>gi|213962459|ref|ZP_03390721.1| SpoU protein [Capnocytophaga sputigena Capno]
gi|213954785|gb|EEB66105.1| SpoU protein [Capnocytophaga sputigena Capno]
Length = 220
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L ++ EERKERF+ ++ R+ + +E + N SA R+ + GVQ H +
Sbjct: 9 LERFITEERKERFLEIIVQRTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIEGRFG 68
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR + ++MGA+KW+D+ ++ + C + LR++GY+I T +A + D D + +
Sbjct: 69 KRL--DAKIAMGAQKWVDVFRYNDTQSCIDTLRTQGYQIVATTPHKNAYFLNDFDITKKS 126
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
A G E G+S + LS +D IPM G +S N+SVA I++
Sbjct: 127 AFFFGTEKEGLSAQVLSQADTFLKIPMVGFTESLNISVAVAIVLQQ 172
>gi|163802263|ref|ZP_02196158.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sp. AND4]
gi|159174068|gb|EDP58878.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sp. AND4]
Length = 227
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLA 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ + L+S+G ++ T++ A+ D+D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIDTAISELKSQGMQVLVTNLSDTAVDFRDIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G SD A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KVGASDRAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|262392639|ref|YP_003284493.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio sp. Ex25]
gi|262336233|gb|ACY50028.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio sp. Ex25]
Length = 227
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKTRQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G SD+A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KVGASDQAKQLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|395803946|ref|ZP_10483187.1| tRNA/rRNA methyltransferase SpoU [Flavobacterium sp. F52]
gi|395433590|gb|EJF99542.1| tRNA/rRNA methyltransferase SpoU [Flavobacterium sp. F52]
Length = 220
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 7/203 (3%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L L E RK F+ V++NR+ + VE + N SA RS + G+Q ++V+
Sbjct: 10 LENILTENRKANFLKVLENRTKHFTVAVEDVYQMHNTSAVMRSCEVFGIQELNVIEQRFG 69
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR ++ +++GA+KW+DI +D+ C + LRS+GY+I T + D D S P+
Sbjct: 70 KRI--DKEIALGAQKWVDINRFDSVSGCLSDLRSKGYQIIATTPHEKDCMLEDFDISKPS 127
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
A+ G E G+S E + +D IPM G +S N+SV+A I++ ++ +R R N
Sbjct: 128 ALFFGTEKEGLSKEIMDNADGFLKIPMVGFTESLNISVSAAIII-QSLTNRLRR-SDINW 185
Query: 318 DLTSEE---KQILLAEFSLRHSK 337
LT EE K++ A+ S+R K
Sbjct: 186 KLTDEEILAKRLDWAKNSIRDIK 208
>gi|254228570|ref|ZP_04921995.1| RNA methyltransferase, TrmH family [Vibrio sp. Ex25]
gi|151938952|gb|EDN57785.1| RNA methyltransferase, TrmH family [Vibrio sp. Ex25]
Length = 236
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 13 ERYNRIHQVLKTRQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLS 69
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 70 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 129
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G SD+A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 130 KVGASDQAKQLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 173
>gi|262273555|ref|ZP_06051369.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Grimontia hollisae CIP
101886]
gi|262222533|gb|EEY73844.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Grimontia hollisae CIP
101886]
Length = 230
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 1/167 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R V+ R + + +E + N+SA R+ADA+G+ VH V +SK R
Sbjct: 1 MTPERFARIHEVLATRQPDLTVCMEEVHKPNNISAIIRTADAVGIHQVHAVWPKNSK-MR 59
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
S GA W+D+ D + F L+++G +I T++ A+ ++D++ PTAIV+
Sbjct: 60 TLGGTSAGARNWVDVVTHDNTPDAFAALKAKGMQILVTNLSETAVDFREIDYTKPTAIVM 119
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E G+S +AL+L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 120 GQEKTGISQQALALADQDIIIPMVGMVQSLNVSVASALILYEAQRQR 166
>gi|261415409|ref|YP_003249092.1| tRNA/rRNA methyltransferase SpoU [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371865|gb|ACX74610.1| tRNA/rRNA methyltransferase (SpoU) [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 218
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 3/173 (1%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
+S + +E L + E R+E +VV R+ C+V+E L D N+SA R+A+ G+Q
Sbjct: 1 MSEPKDMETLLARVTERRRELLTSVVNRRTRHFCMVLEDLFDPHNISAVIRTAEVFGLQD 60
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
VH++ D++ Y N+ + G+ KW+ + L+ C LR +GY+IA SV
Sbjct: 61 VHIIEEDNA--YSVNKSILKGSYKWMSLYLYKKRMLCMEKLREKGYKIAVASTNTTN-SV 117
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
D+D S P A +G+E G + L+ +D +P G+ +S NVSVA G+LM
Sbjct: 118 LDLDLSQPMAFYLGSEFHGNHPDTLAHADYEFKLPQYGITESMNVSVAGGVLM 170
>gi|86133500|ref|ZP_01052082.1| SpoU rRNA methylase family protein [Polaribacter sp. MED152]
gi|85820363|gb|EAQ41510.1| SpoU rRNA methylase family protein [Polaribacter sp. MED152]
Length = 229
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 16/233 (6%)
Query: 127 VYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGV 186
V++ +++E L +L ++RK+ F V+ R+ +V+E + N SA R+ D GV
Sbjct: 3 VFMVDKKLLEYLEGFLTDKRKQTFQKVLAERTRHFTVVLEDIYQPHNASAVVRTCDIFGV 62
Query: 187 QSVHVVSCDSSKRY--RENRHVSMGAEKWLDIELW----DAPRECFNVLRSRGYRIATTH 240
Q +HV+ RY R +++V+ GA+KW+ + + D + C N L++ GY+I T
Sbjct: 63 QDLHVIE----NRYINRVSKYVTKGAQKWITTKRYKTDGDNTKTCLNHLKTAGYQIIATS 118
Query: 241 VGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGIL 300
DA + D TA V G E G+SD +D IPM G +SFN+SVAA I+
Sbjct: 119 PHADANLLQDFKIDKKTAFVFGAEATGISDTVKEHADGFLKIPMVGFTESFNISVAAAII 178
Query: 301 MHHAVCDRATRLVGCNGD--LTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
+ D TRL D L+++EK+ L ++ K+ I + ++ E
Sbjct: 179 LQ----DVTTRLKNSRIDWMLSNDEKEQLYLQWIKETIKNVTKIEERFYQQLE 227
>gi|254446967|ref|ZP_05060434.1| tRNA (guanosine-2-O)-methyltransferase [gamma proteobacterium
HTCC5015]
gi|198263106|gb|EDY87384.1| tRNA (guanosine-2-O)-methyltransferase [gamma proteobacterium
HTCC5015]
Length = 225
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 107/190 (56%), Gaps = 6/190 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +RF++ +K R S+ +V+E + N SA RS +A+GV H V + N
Sbjct: 4 ERHQRFIDTLKRRQTSLTVVMENVHKPHNFSAIVRSCEAVGVHRAHAVYPEGG--IGNNA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
++GA KW+ ++ + F L+++G+++ T H+ A+ ++D++ PTA+V+G+E
Sbjct: 62 GTTVGAHKWVQVDTHRNIQTPFQQLKAQGFQLLTAHLDETAVDFREVDYTQPTAVVMGSE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC--NGDLTSE 322
G+S+EA L+D IPM G+ +S NVSVA +++ A R +L G +L
Sbjct: 122 LHGISEEAAQLADHSIVIPMLGLTESLNVSVATALILFEA--QRQRQLAGMYEQPELDEA 179
Query: 323 EKQILLAEFS 332
++ L+ E++
Sbjct: 180 TRKTLMFEWA 189
>gi|428216758|ref|YP_007101223.1| tRNA/rRNA methyltransferase SpoU [Pseudanabaena sp. PCC 7367]
gi|427988540|gb|AFY68795.1| tRNA/rRNA methyltransferase (SpoU) [Pseudanabaena sp. PCC 7367]
Length = 233
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 99/176 (56%), Gaps = 7/176 (3%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
E+++ L P+ ER +F V++ RS + +V+E + N SA RS D GVQ VH+
Sbjct: 13 QELIDFLLPFSTPERYHKFKEVLQWRSRWLTVVLEDIFQPHNASAVLRSCDCFGVQDVHI 72
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAP-----RECFNVLRSRGYRIATTHVGMDAI 246
V ++ + N HV+MGA++WL + ++ C+ LR +GY IA T +
Sbjct: 73 V--ENKVEFNPNSHVAMGADQWLTLYRYEDEGTNNMASCYEYLRQQGYSIAATTPHNPNV 130
Query: 247 SVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
++ ++ A+V G E RG+SD A+ +D R +IPM G +SFN+SV+A + ++
Sbjct: 131 TIAELPIDRKLALVFGTELRGLSDWAIENADYRVAIPMLGFTESFNISVSASLFLY 186
>gi|406595104|ref|YP_006746234.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii ATCC
27126]
gi|406372425|gb|AFS35680.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii ATCC
27126]
Length = 235
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R V++ R + + +E + NVSA R+ DA+G+ VH V K+Y+ R
Sbjct: 4 ERYQRIRQVLERRQTDLTVCLENVHKPHNVSAVVRTCDAVGIHRVHTVW---EKKYQFRR 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+++W+ D + L+ +G ++ TH+ A+ D+D++ PTAI+ G E
Sbjct: 61 GTAMGSQQWVRQTNHDNINDAMAELKGQGMQVLVTHLSDTAVDFRDIDYTKPTAILFGQE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G SDEA +++D IPM GMV S NVSVAA ++++ A R + L EE
Sbjct: 121 KYGASDEAKAIADQDIVIPMMGMVQSLNVSVAAALVLYEAQRQRTIAGMYNTQQLPEEEC 180
Query: 325 QIL 327
Q L
Sbjct: 181 QAL 183
>gi|311746904|ref|ZP_07720689.1| tRNA guanosine-2'-O-methyltransferase [Algoriphagus sp. PR1]
gi|126578593|gb|EAZ82757.1| tRNA guanosine-2'-O-methyltransferase [Algoriphagus sp. PR1]
Length = 234
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
+++ L+ Y+ + + V+ R+ +V+E + N SA R+ D G+Q VH++
Sbjct: 13 LIDYLAQYITAHKMQVMEKVLAQRTRHFTVVLENIYKPHNASAVLRTCDCFGIQDVHII- 71
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRE-------CFNVLRSRGYRIATTHVGMDAI 246
+ ++ Y+ N V+ GA +WL + + P E CF+ L+S G++I T
Sbjct: 72 -EKTREYKVNPFVTRGASQWLTLHKYFQPEEPENAVINCFSSLKSNGFKIYGTSPDPQTR 130
Query: 247 SVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVC 306
+ D+D + A+V GNE+ G+S+E + +D IPM+G +SFN+SVAA + + + V
Sbjct: 131 PIQDLDPNEKIALVFGNEHEGISNEVKNAADGLVHIPMRGFTESFNISVAASLFLQNLV- 189
Query: 307 DRATRLVGCNGDLTSEEKQIL 327
+A+ V + +LT EKQ L
Sbjct: 190 QKASDYVIPDYNLTEVEKQEL 210
>gi|451972733|ref|ZP_21925936.1| RNA methyltransferase, TrmH family [Vibrio alginolyticus E0666]
gi|451931301|gb|EMD78992.1| RNA methyltransferase, TrmH family [Vibrio alginolyticus E0666]
Length = 227
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKTRQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G SD+A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KVGASDQAKQLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|119952855|ref|YP_945064.1| tRNA (guanosine-2'-O-)-methyltransferase [Borrelia turicatae
91E135]
gi|119861626|gb|AAX17394.1| tRNA (guanosine-2'-O-)-methyltransferase [Borrelia turicatae
91E135]
Length = 232
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 5/182 (2%)
Query: 127 VYLSSSEV---VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADA 183
+Y S+E+ +E LS ++ + R+ER V+ NR+ + LV+E + N SAT R+ +
Sbjct: 12 LYFVSNEILKRIEILSEFITQRRRERIDEVLSNRTNYLTLVLEDIFQPQNASATMRTIEI 71
Query: 184 LGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGM 243
LG+ ++H++ +++ Y N V +GA KW+DI + F+ L+ GY+I T +
Sbjct: 72 LGLSNIHIIETNNT--YTLNPGVVLGASKWIDIIKYQCVESAFDNLKGNGYKIVATSLDN 129
Query: 244 DAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
+AI + D AI G E G+S+ L +DL IPM G S+N+SVA I+ +
Sbjct: 130 EAIFLDDFPIDDKMAIFFGTELTGLSNTVLENADLHLKIPMYGFTQSYNLSVAVSIVFYS 189
Query: 304 AV 305
+
Sbjct: 190 LI 191
>gi|262197612|ref|YP_003268821.1| tRNA/rRNA methyltransferase SpoU [Haliangium ochraceum DSM 14365]
gi|262080959|gb|ACY16928.1| tRNA/rRNA methyltransferase (SpoU) [Haliangium ochraceum DSM 14365]
Length = 231
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 111/198 (56%), Gaps = 4/198 (2%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
++EAL P++ +ER R +V+ R + + +E L D N +A RS +A+G+ S+HV
Sbjct: 21 IIEALRPFVTDERAARIDSVLSARLSGLTVAIENLHDPHNGAAVVRSVEAVGLTSLHV-- 78
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ +R++ + V++G+EKW+ + C +LR G+R+ + +S+ D+D
Sbjct: 79 AEPIERFQFSPAVAIGSEKWIRVLRHQGFTACARILRGAGFRMYAACPDAE-MSMDDIDV 137
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
S P+A+V GNE+ G+S A+ D + +IPM G S N+SV+ + + R L+
Sbjct: 138 SQPSAVVFGNEHEGLSRRAIDACDAKVAIPMHGFTQSLNLSVSVAVSIFQLAARRRA-LL 196
Query: 314 GCNGDLTSEEKQILLAEF 331
G GDL +E+ IL A +
Sbjct: 197 GRLGDLEDQERAILQARW 214
>gi|407685909|ref|YP_006801082.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407289289|gb|AFT93601.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 235
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 100/183 (54%), Gaps = 3/183 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R V++ R + + +E + NVSA R+ DA+G+ VH V K+Y+ R
Sbjct: 4 ERYQRIRQVLERRQTDLTVCLENVHKPHNVSAVVRTCDAVGIHRVHTVW---EKKYQFRR 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+++W+ D + + L+ +G ++ TH+ A+ D+D++ PTAI+ G E
Sbjct: 61 GTAMGSQQWVRQTNHDNINDAMSELKGQGMQVLVTHLSDTAVDFRDIDYTKPTAILFGQE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G SDEA +++D IPM GMV S NVSVAA ++++ A R + L EE
Sbjct: 121 KYGASDEAKAVADHDIVIPMMGMVQSLNVSVAAALVLYEAQRQRTIAGMYNTQQLPEEEC 180
Query: 325 QIL 327
Q L
Sbjct: 181 QAL 183
>gi|27364301|ref|NP_759829.1| tRNA guanosine-2'-O-methyltransferase [Vibrio vulnificus CMCP6]
gi|27360419|gb|AAO09356.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Vibrio vulnificus
CMCP6]
Length = 228
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 117/213 (54%), Gaps = 7/213 (3%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
EER +R V+K R + L +E + NVSA R+ADA G+ VH V +++ +
Sbjct: 3 EERYQRIQQVLKARQTDLTLCLEEVHKPNNVSAMIRTADATGLHKVHAVW--PTEQMKTL 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
++ S GA W++++ D+ + + L+++G ++ T++ A+ +D++ PTAI++G+
Sbjct: 61 KNTSAGARNWVEVDTHDSIADAVSALKAQGMQVLVTNLSDSAVDFRQIDYTQPTAIILGS 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEE 323
E GVS++A +L+D IPM GMV S NVSVA ++++ A R + N + + +
Sbjct: 121 EKIGVSEQAKALADQDIMIPMVGMVQSLNVSVACAVILYEAQRQREAAGMYQNDESSIDA 180
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRKETTHMP 356
+ I F H ++ + AKRK + P
Sbjct: 181 ETINRILFERGH-----PVLAKVAKRKGLAYPP 208
>gi|320157693|ref|YP_004190072.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Vibrio vulnificus
MO6-24/O]
gi|319933005|gb|ADV87869.1| tRNA (guanosine18-2'-O-) -methyltransferase [Vibrio vulnificus
MO6-24/O]
Length = 228
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 117/213 (54%), Gaps = 7/213 (3%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
EER +R V+K R + L +E + NVSA R+ADA G+ VH V +++ +
Sbjct: 3 EERYQRIQQVLKARQTDLTLCLEEVHKPNNVSAMIRTADATGLHKVHAVW--PTEQMKTL 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
++ S GA W++++ D+ + + L+++G ++ T++ A+ +D++ PTAI++G+
Sbjct: 61 KNTSAGARNWVEVDTHDSIADAVSALKAQGMQVLVTNLSDSAVDFRQIDYTQPTAIILGS 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEE 323
E GVS++A +L+D IPM GMV S NVSVA ++++ A R + N + + +
Sbjct: 121 EKIGVSEQAKALADQDIIIPMVGMVQSLNVSVACAVILYEAQRQREAAGMYQNDESSIDA 180
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRKETTHMP 356
+ I F H ++ + AKRK + P
Sbjct: 181 ETINRILFERGH-----PVLAKVAKRKGLAYPP 208
>gi|37678424|ref|NP_933033.1| tRNA guanosine-2'-O-methyltransferase [Vibrio vulnificus YJ016]
gi|37197164|dbj|BAC93004.1| rRNA methylase [Vibrio vulnificus YJ016]
Length = 228
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 117/213 (54%), Gaps = 7/213 (3%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
EER +R V+K R + L +E + NVSA R+ADA G+ VH V +++ +
Sbjct: 3 EERYQRIQQVLKARQTDLTLCLEEVHKPNNVSAMIRTADATGLHKVHAVW--PTEQMKTL 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
++ S GA W++++ D+ + + L+++G ++ T++ A+ +D++ PTAI++G+
Sbjct: 61 KNTSAGARNWVEVDTHDSIADAVSALKAQGMQVLVTNLSDSAVDFRQIDYTQPTAIILGS 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEE 323
E GVS++A +L+D IPM GMV S NVSVA ++++ A R + N + + +
Sbjct: 121 EKIGVSEQAKALADQDIIIPMVGMVQSLNVSVACAVILYEAQRQREAAGMYQNDESSIDA 180
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRKETTHMP 356
+ I F H ++ + AKRK + P
Sbjct: 181 ETINRILFERGH-----PVLAKVAKRKGLAYPP 208
>gi|148241671|ref|YP_001226828.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. RCC307]
gi|147849981|emb|CAK27475.1| tRNA (Guanosine-2'-O-)-methyltransferase [Synechococcus sp. RCC307]
Length = 229
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 3/183 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+K R + +++E + N+SA R+ DA GV H VS R R
Sbjct: 3 LLPRRFERLRSVLKRRMADLTVLMEAVEKPHNLSAILRTCDATGVFEAHAVSLKG--RPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ I D+ ++ F LR++G+RI T +G++A+ D++ P+A V+
Sbjct: 61 TFNSTAQGSQKWVPIRDHDSVKDAFAELRAKGFRIYGTMLGVNAVDYRSCDFTKPSAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGDLT 320
G E G++ EA D IPM GMV S NVSVAA L+ AV R A L+ G+
Sbjct: 121 GAEKWGLTAEAGDAVDQPVFIPMSGMVQSLNVSVAAATLLFEAVRQRQAAGLIPTQGEGL 180
Query: 321 SEE 323
S E
Sbjct: 181 SPE 183
>gi|269103907|ref|ZP_06156604.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163805|gb|EEZ42301.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 236
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER ER V+ R + + +E + NVSA R+ADA+GV VH V +++ R +
Sbjct: 4 ERFERISQVLATRQPDLTVCLEQVHKPNNVSAIIRTADAVGVHKVHAVW--QAEQLRLHS 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S G+ W+++E + + ++++G ++ T++ A+ ++D++ PTAI++G E
Sbjct: 62 HTSAGSRNWVELETHANITDAVHAMKAQGMQVLATNLSERAVDFREIDYTKPTAIILGGE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KHGITPEALALADQDIIIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|78212346|ref|YP_381125.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. CC9605]
gi|78196805|gb|ABB34570.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. CC9605]
Length = 229
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+ +R + +++E + N+SA RS DA+G H VS D R R
Sbjct: 3 LLPRRFERLKSVLNHRMADLTVLLEHVEKPHNLSAILRSCDAVGALEAHAVSFDG--RPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAP--RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
+ G++KW + L D P L+ G+R+ TH+G+DA + D++ PTA
Sbjct: 61 TFNSTAQGSQKW--VPLHDHPDTETAIRHLKGEGFRLYGTHLGVDAKDYRECDFTVPTAF 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR-LVGCNGD 318
V+G E G++D+A L D IPM+GMV S NVSVA L+ A+ R L G+
Sbjct: 119 VLGAEKWGLTDQARDLMDEALFIPMRGMVQSLNVSVATATLLFEALRQRQVAGLAPTQGE 178
Query: 319 -LTSEEKQILLAEFS 332
L E+ Q LL E+S
Sbjct: 179 GLKPEQYQQLLFEWS 193
>gi|21673707|ref|NP_661772.1| tRNA methyltransferase SpoU [Chlorobium tepidum TLS]
gi|21646829|gb|AAM72114.1| tRNA methyltransferase SpoU [Chlorobium tepidum TLS]
Length = 229
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 102/180 (56%), Gaps = 6/180 (3%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
L + ++ +SP ER + +++ R + LV++ ++ N++A RS DA+G+
Sbjct: 6 LRQTNLIALVSP----ERFRKIRELLEKRQTDLTLVMDNVNKPHNLAAIIRSCDAVGIHQ 61
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
VH +S SS + ++ H + GA +WL + L ++ LR G +I H +A++
Sbjct: 62 VHAISYRSSIKTKQ--HTAAGASRWLKVHLNESFVPVGEKLRQSGMQILVAHYCPEAVNF 119
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+D++ PTAIV+G E +G S EAL L+D IPM GMV+S NVSVAA +++ A R
Sbjct: 120 RSIDYTRPTAIVMGEELKGPSQEALGLADNFIYIPMMGMVESLNVSVAAALILFEAQRQR 179
>gi|343496408|ref|ZP_08734506.1| tRNA guanosine-2'-O-methyltransferase [Vibrio nigripulchritudo ATCC
27043]
gi|342821247|gb|EGU56035.1| tRNA guanosine-2'-O-methyltransferase [Vibrio nigripulchritudo ATCC
27043]
Length = 228
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R V+K R + L +E + NVSA RSADA GV VH V D + R
Sbjct: 4 DRYHRIQTVLKARQPDLTLCLEEVHKPNNVSAIIRSADAAGVHKVHAVWPDP--KMRTLS 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ ++ + VL+ +G +I T++ A+ ++D++ PTA+++G E
Sbjct: 62 HTSAGARNWVEVDTHESIDDAVGVLKGQGMQILATNLSDTAVDFREIDYTKPTAVILGGE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G++ ALS++D IPM GMV S NVSVA+ +++ A R
Sbjct: 122 KHGITKHALSMADQDIIIPMVGMVQSLNVSVASALILFEAQRQR 165
>gi|302337050|ref|YP_003802256.1| tRNA/rRNA methyltransferase SpoU [Spirochaeta smaragdinae DSM
11293]
gi|301634235|gb|ADK79662.1| tRNA/rRNA methyltransferase (SpoU) [Spirochaeta smaragdinae DSM
11293]
Length = 229
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 125/232 (53%), Gaps = 13/232 (5%)
Query: 129 LSSSEVVEALSPYLME----ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADAL 184
+S ++ EAL YL + R ER +++++ R+ + +V+E + N SA RS +
Sbjct: 1 MSEAKSDEALIAYLKQFVTTRRWERIISILEERTRYITVVLEDIYQPHNASAVLRSCEGF 60
Query: 185 GVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP-----RECFNVLRSRGYRIATT 239
G+Q VHV+ ++ R+ + V++G WLDI + + + L+++GYRI T
Sbjct: 61 GIQDVHVI--ENRNRFTISSGVALGTSGWLDIHRYREEGAGNTLKAVHELKAKGYRIVAT 118
Query: 240 HVGMDAISVYDMDWSC-PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAG 298
I++ D D S +A + GNE GVS EA++L+D IPM+G V+SFN+SV+
Sbjct: 119 SPHAQDINLEDFDISAGKSAFLFGNELEGVSQEAMALADEFMKIPMRGFVESFNISVSCA 178
Query: 299 ILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
I++HH + + L L EEK +L + + KSA S+ + +++
Sbjct: 179 IVLHH-LSWKLRELDPALWKLNEEEKSQILLTWLRKSVKSADSLEEHFRQQQ 229
>gi|260771994|ref|ZP_05880911.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio metschnikovii
CIP 69.14]
gi|260612861|gb|EEX38063.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio metschnikovii
CIP 69.14]
Length = 228
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +V+K R + + +E + NVSA R+ADA+G+ +H V + ++ R
Sbjct: 4 ERYQRIQDVLKARQTDLTVCLEEVHKPNNVSAVIRTADAVGLHQIHAVWPN--EQMRTLS 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ ++ E + L+ G +I T++ AI +D++ PTAI+ G+E
Sbjct: 62 HTSAGARNWVEVQTHNSTLEAVSHLKETGMQILVTNLSEHAIDFRAIDYTQPTAIIFGSE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G+S +AL L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KSGISPQALQLADHDIVIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|375264178|ref|YP_005021621.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sp. EJY3]
gi|369839502|gb|AEX20646.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sp. EJY3]
Length = 227
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + + + R
Sbjct: 4 ERYHRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPN---KMRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ + L+ +G ++ T++ A+ D+D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIEDAVTELKEQGMQVLVTNLSETAVDFRDIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KTGASEQAKQLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|407682024|ref|YP_006797198.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'English Channel 673']
gi|407243635|gb|AFT72821.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'English Channel 673']
Length = 235
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R V++ R + + +E + NVSA R+ DA+G+ VH V K+Y+ R
Sbjct: 4 ERYQRIRQVLERRQTDLTVCLENVHKPHNVSAVVRTCDAVGIHRVHTVW---EKKYQFRR 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+++W+ D + L+ +G ++ TH+ A+ D+D++ PTAI+ G E
Sbjct: 61 GTAMGSQQWVRQTNHDNINDAMAELKGQGMQVLVTHLSDTAVDFRDIDYTKPTAILFGQE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G SDEA +++D IPM GMV S NVSVAA ++++ A R + L EE
Sbjct: 121 KYGASDEAKAVADHDIVIPMMGMVQSLNVSVAAALVLYEAQRQRTIAGMYNTQQLPEEEC 180
Query: 325 QIL 327
Q L
Sbjct: 181 QAL 183
>gi|193214688|ref|YP_001995887.1| tRNA guanosine-2'-O-methyltransferase [Chloroherpeton thalassium
ATCC 35110]
gi|193088165|gb|ACF13440.1| tRNA guanosine-2'-O-methyltransferase [Chloroherpeton thalassium
ATCC 35110]
Length = 219
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 2/192 (1%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
++ +R ++ ++ R + +V+E ++ N++A R+ DA+G+ VH V+ R
Sbjct: 3 FVSSDRFQQIKRLLDKRQPDLTVVMENVNKAHNLAAIIRTCDAVGIPKVHAVALRPEIRT 62
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
++N + GA +W+D+++ ++ + F+ LR G++I H A +D++ PTA+V
Sbjct: 63 KQNS--ASGANRWVDVQIHNSTEDVFSTLRQGGFQIFVAHFSPQATDFRAVDFTKPTALV 120
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLT 320
VG E G+S+ A+SL+D +PM GMV+S NVSVA I++ A R + L
Sbjct: 121 VGAEWEGISETAISLADGSLYVPMVGMVESLNVSVATAIMLFEAQRQRTEKGFYDKPRLD 180
Query: 321 SEEKQILLAEFS 332
Q LL E +
Sbjct: 181 EATYQRLLFELT 192
>gi|305667310|ref|YP_003863597.1| spoU protein [Maribacter sp. HTCC2170]
gi|88709357|gb|EAR01590.1| spoU protein [Maribacter sp. HTCC2170]
Length = 216
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L ++ ERK RF+ V++ R+ V + +E + N SA RS + G+Q HV+
Sbjct: 10 LEEFISNERKNRFLQVLEERTKYVTVAIEDVFQLHNTSAVIRSCEVFGLQDAHVIENRFG 69
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR +N ++MGA++W+D++ + C + LR +GY+I T D+ + D + T
Sbjct: 70 KRLDKN--IAMGAQQWVDVKRHEDTESCISHLRDQGYQIIATTPHDDSCLLNDFNLDKKT 127
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
A+ G E G+S+E + +D IPM G +S N+SV+A I++ +
Sbjct: 128 ALFFGTEKEGLSEEVMQKADGFLKIPMVGFTESLNISVSAAIILQY 173
>gi|431798645|ref|YP_007225549.1| rRNA methylase [Echinicola vietnamensis DSM 17526]
gi|430789410|gb|AGA79539.1| rRNA methylase [Echinicola vietnamensis DSM 17526]
Length = 230
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 19/226 (8%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
LS Y+ + +K R ++ RS LV+E + N SA R+ D G+Q +H++ + +
Sbjct: 14 LSQYVTDHKKARMEEILALRSRFFTLVLEDIYKPHNASAVIRTCDCFGIQDIHII--EKA 71
Query: 198 KRYRENRHVSMGAEKWLDIELWD------APRECFNVLRSRGYRIATTHVGMDAISVYDM 251
Y N +V+ GA +W+DI + A CF LR +GYRI T ++I ++ +
Sbjct: 72 NSYDVNPYVTRGAAQWVDIYKYQETPHVSAVDVCFEELREKGYRILATSPHGESIPLHAL 131
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+ TA+V GNE+ GVS E + SD IPM G +SFN+SV+A I ++ D +
Sbjct: 132 EADQKTALVFGNEHEGVSQEVIEKSDGVVHIPMTGFTESFNISVSASICLY----DLQQK 187
Query: 312 LVGCNGD---LTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETTH 354
++ + L EEK+ E R KS I V + + +H
Sbjct: 188 IIRSRPEIYYLREEEKE----EIRFRWYKSVIKNVEAHIRSFYNSH 229
>gi|389839055|ref|YP_006341139.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii ES15]
gi|424801655|ref|ZP_18227197.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
696]
gi|387849531|gb|AFJ97628.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii ES15]
gi|423237376|emb|CCK09067.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
696]
Length = 229
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + N L++RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRNISDAVNHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EALSL+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITEEALSLADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSTLPEE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|410637548|ref|ZP_11348126.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola lipolytica E3]
gi|410142910|dbj|GAC15331.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola lipolytica E3]
Length = 228
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER ++ ++ R S+ + +E + NVSA RS DA+G+ VH V D +K R
Sbjct: 4 ERYQKIRAILSKRQPSLTVCLEQVHKPHNVSAVVRSCDAVGIHKVHAVWDDKTKGLRGG- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG++ W+ +E D+ + L+++ ++ TH+ A+ D+D+S PTAI++G E
Sbjct: 63 -TAMGSQNWVYVENHDSIEDAIGHLKNQKMQVLVTHLSDSAVDFRDVDYSKPTAIILGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
G + EA+ L+D IPM GMV S NVSVAA ++++ A
Sbjct: 122 KHGATQEAIDLADQEIVIPMVGMVQSLNVSVAAALVLYEA 161
>gi|269965888|ref|ZP_06179981.1| tRNA methyltransferase [Vibrio alginolyticus 40B]
gi|269829441|gb|EEZ83682.1| tRNA methyltransferase [Vibrio alginolyticus 40B]
Length = 236
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 13 ERYNRIHQVLKTRQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLS 69
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 70 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTRPTAIILGSE 129
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 130 KVGASEQAKQLADQDIIIPMVGMVQSLNVSVASAVILYEAQRQR 173
>gi|258512124|ref|YP_003185558.1| tRNA/rRNA methyltransferase SpoU [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478850|gb|ACV59169.1| tRNA/rRNA methyltransferase (SpoU) [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 256
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
V+ R+ + + +E + D N +A RSA+A GVQ HV + + + ++ V+ GA K
Sbjct: 41 VLMRRTSYIAVAMEAVDDGHNQAAILRSAEAFGVQ--HVAVIEGKQPFHPSKGVTQGAHK 98
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
WL ++ + L +RG+++ T +G A + +D + PTAI+ GNE GVS EA
Sbjct: 99 WLTLQRMPDIGRAIDALHARGFQVYATDLGEGAQPIDAVDLARPTAILFGNEKDGVSPEA 158
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFS 332
+D R IPM G V SFNVSVAA I ++ + RA VG L ++E+ L +
Sbjct: 159 RERADGRFYIPMAGFVQSFNVSVAAAIALYE-LTRRARETVGDRYALGADERHKLYVTWC 217
Query: 333 LRHSKSAISIVHEYAKRK 350
LR A E A+R+
Sbjct: 218 LRSLHGA---TREEARRR 232
>gi|385790334|ref|YP_005821457.1| TrmH family RNA methyltransferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302328206|gb|ADL27407.1| RNA methyltransferase, TrmH family [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 205
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R+E +VV R+ C+V+E L D N+SA R+A+ G+Q VH++ D++ Y
Sbjct: 1 MTERRRELLTSVVNRRTRHFCMVLEDLFDPHNISAVIRTAEVFGLQDVHIIEEDNA--YS 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N+ + G+ KW+ + L+ C LR +GY+IA SV D+D S P A +
Sbjct: 59 VNKSILKGSYKWMSLYLYKKRMLCMEKLREKGYKIAVASTNTTN-SVLDLDLSQPMAFYL 117
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
G+E G + L+ +D +P G+ +S NVSVA G+LM
Sbjct: 118 GSEFHGNHPDTLAHADYEFKLPQYGITESMNVSVAGGVLM 157
>gi|86142740|ref|ZP_01061179.1| spoU protein [Leeuwenhoekiella blandensis MED217]
gi|85830772|gb|EAQ49230.1| spoU protein [Leeuwenhoekiella blandensis MED217]
Length = 217
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E++E L +L R++ F V+ R+ + + +E + N SA RS DA GVQ +HV+
Sbjct: 4 ELIEYLETFLTRRRQDLFKQVLDERTRFLTVAIEDVGHLHNTSAVMRSCDAFGVQDIHVI 63
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR +R ++MGA+KW ++ +D+ + L+S GY+I T A + D
Sbjct: 64 EELKGKRI--DREIAMGAQKWTSVKRYDSTKNALAKLKSEGYQIVATTPHHTAHKLEDFK 121
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
PTA+ G+E G+++ + +D IP G S N+SV A IL+
Sbjct: 122 LDKPTALFFGSEKDGLTETVIEAADEYIYIPTFGFTQSLNISVCAAILLQ 171
>gi|260435545|ref|ZP_05789515.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8109]
gi|260413419|gb|EEX06715.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8109]
Length = 210
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 8/195 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+ +R + +++E + N+SA RS DA+G H VS + R R
Sbjct: 3 LLPRRFERLKSVLNHRMADLTVLLEHVEKPHNLSAILRSCDAVGALEAHAVSFNG--RPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAP--RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
+ G++KW + L D P L+++G+R+ TH+G+DA + D++ PTA
Sbjct: 61 TFNSTAQGSQKW--VPLHDHPDTETAIRHLKAKGFRLYGTHLGVDAKDYRECDFTGPTAF 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD 318
V+G E G++D+A L D IPM+GMV S NVSVA L+ A+ R L G+
Sbjct: 119 VLGAEKWGLTDQAQDLMDEALFIPMRGMVQSLNVSVATATLLFEALRQRQVAGLAPTQGE 178
Query: 319 -LTSEEKQILLAEFS 332
L E Q LL E+S
Sbjct: 179 GLKPEHYQQLLFEWS 193
>gi|410639544|ref|ZP_11350090.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola chathamensis
S18K6]
gi|410140863|dbj|GAC08277.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola chathamensis
S18K6]
Length = 256
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 137 ALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDS 196
A++P +E R +R ++ R S+ + +E + NVSA RS DA+G+ +H V D
Sbjct: 3 AIAPMSVE-RYQRIRKLLSTRQPSLTVCLEQVHKPHNVSAILRSCDAVGINRIHGV-WDQ 60
Query: 197 SKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP 256
+ R+ +MG+E W+ E+ + + VL+ + ++ TH+ D++ ++D++ P
Sbjct: 61 KTKLRKG--TAMGSEHWVKTEMHSSIDDAVGVLKQQNMQVLVTHLSDDSVDFREIDYTQP 118
Query: 257 TAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCN 316
TAI++G E G ++EA++L+D IPM GMV S NVSVAA ++++ A R +
Sbjct: 119 TAIILGQERHGATEEAIALADKNIVIPMVGMVQSLNVSVAAALVLYEAQRQRDVAGMYDT 178
Query: 317 GDLTSEEKQILLAE 330
L EE Q +L E
Sbjct: 179 LQLDEEECQRVLFE 192
>gi|424048267|ref|ZP_17785821.1| tRNA guanosine-2'-O-methyltransferase [Vibrio cholerae HENC-03]
gi|408882902|gb|EKM21697.1| tRNA guanosine-2'-O-methyltransferase [Vibrio cholerae HENC-03]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|153837870|ref|ZP_01990537.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AQ3810]
gi|149748733|gb|EDM59578.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AQ3810]
Length = 231
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYHRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+++E ++ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVETHNSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|444424832|ref|ZP_21220284.1| tRNA guanosine-2'-O-methyltransferase [Vibrio campbellii CAIM 519 =
NBRC 15631]
gi|444241955|gb|ELU53473.1| tRNA guanosine-2'-O-methyltransferase [Vibrio campbellii CAIM 519 =
NBRC 15631]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|332304823|ref|YP_004432674.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola sp. 4H-3-7+YE-5]
gi|332172152|gb|AEE21406.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola sp. 4H-3-7+YE-5]
Length = 250
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R ++ R S+ + +E + NVSA RS DA+G+ +H V D + R+
Sbjct: 4 ERYQRIRKLLSTRQPSLTVCLEQVHKPHNVSAILRSCDAVGINRIHGV-WDQKTKLRKG- 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+E W+ E+ + + VL+ + ++ TH+ D++ ++D++ PTAI++G E
Sbjct: 62 -TAMGSEHWVKTEMHSSIDDAVGVLKQQNMQVLVTHLSDDSVDFREIDYTQPTAIILGQE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G ++EA++L+D IPM GMV S NVSVAA ++++ A R + L EE
Sbjct: 121 RHGATEEAIALADKNIVIPMVGMVQSLNVSVAAALVLYEAQRQRDVAGMYDTLQLDEEEC 180
Query: 325 QILLAE 330
Q +L E
Sbjct: 181 QRVLFE 186
>gi|410647537|ref|ZP_11357968.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola agarilytica
NO2]
gi|410132958|dbj|GAC06367.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola agarilytica
NO2]
Length = 256
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 137 ALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDS 196
A++P +E R +R ++ R S+ + +E + NVSA RS DA+G+ +H V D
Sbjct: 3 AIAPMSVE-RYQRIRKLLSTRQPSLTVCLEQVHKPHNVSAILRSCDAVGINRIHGV-WDQ 60
Query: 197 SKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP 256
+ R+ +MG+E W+ E+ + + VL+ + ++ TH+ D++ ++D++ P
Sbjct: 61 KTKLRKG--TAMGSEHWVKTEMHSSIDDAVGVLKQQNMQVLVTHLSDDSVDFREIDYTQP 118
Query: 257 TAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCN 316
TAI++G E G ++EA++L+D IPM GMV S NVSVAA ++++ A R +
Sbjct: 119 TAIILGQERHGATEEAIALADKNIVIPMVGMVQSLNVSVAAALVLYEAQRQRDVAGMYDT 178
Query: 317 GDLTSEEKQILLAE 330
L EE Q +L E
Sbjct: 179 LQLDEEECQRVLFE 192
>gi|153833892|ref|ZP_01986559.1| tRNA guanosine-2'-O-methyltransferase [Vibrio harveyi HY01]
gi|269959394|ref|ZP_06173777.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|148869730|gb|EDL68707.1| tRNA guanosine-2'-O-methyltransferase [Vibrio harveyi HY01]
gi|269835831|gb|EEZ89907.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|330447150|ref|ZP_08310800.1| spoU rRNA Methylase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491341|dbj|GAA05297.1| spoU rRNA Methylase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 241
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R +R V+ R + + +E + NVSA R+ADA+GV VH V R
Sbjct: 4 DRFQRIHEVLATRQPDLTVCMEEVHKPNNVSAIIRTADAVGVHKVHAVWPKEGMRVLS-- 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ E L+ +G ++ T++ AI ++D++ PTAI++G E
Sbjct: 62 HTSAGARNWVELDTHDSMVEAVQALKDQGMQVLATNLSDTAIDFREVDYTKPTAIILGGE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G++ EALS++D IPM GMV S NVSVA+ ++++ A R N + EK
Sbjct: 122 KNGITAEALSMADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ------NAGMYEREK 175
Query: 325 QIL 327
+L
Sbjct: 176 TLL 178
>gi|156972948|ref|YP_001443855.1| tRNA guanosine-2'-O-methyltransferase [Vibrio harveyi ATCC
BAA-1116]
gi|156524542|gb|ABU69628.1| hypothetical protein VIBHAR_00626 [Vibrio harveyi ATCC BAA-1116]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|260774740|ref|ZP_05883643.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio coralliilyticus
ATCC BAA-450]
gi|260609302|gb|EEX35454.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio coralliilyticus
ATCC BAA-450]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K+R + +E + NVSA R+ADA G+ +H V + R
Sbjct: 4 ERYNRIQQVLKSRQADLTFCLEEVHKPNNVSAVIRTADATGIHKIHAVWPND---MRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+++E D+ + L+ +G +I T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVETHDSIGKAVAELKDQGMQILVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S+EA L+D IPM GMV S NVSVA+ ++M+ A R
Sbjct: 121 KIGASEEAKQLADQDIIIPMIGMVQSLNVSVASAVIMYEAQRQR 164
>gi|433656470|ref|YP_007273849.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Vibrio
parahaemolyticus BB22OP]
gi|432507158|gb|AGB08675.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Vibrio
parahaemolyticus BB22OP]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYHRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+++E ++ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVETHNSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|334702479|ref|ZP_08518345.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas caviae Ae398]
Length = 243
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER +R +++ R + + +E + N++A R+ADA+G+ VH V S R
Sbjct: 1 MTPERFKRISDMLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKSWIHKR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ + G++ W+D++L L++ G +I TH+ ++ +D++ PTAI+V
Sbjct: 61 KG--TARGSQNWVDVKLHPDIGSAVTELKASGMQILATHLSDSSVDFRAIDYTRPTAILV 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC---NGD 318
G E G+ +EAL+L+D IPM GMV S NVSVAA +++ A R L GC
Sbjct: 119 GQEKHGIGEEALALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGCYQRGCP 176
Query: 319 LTSEEKQILLAE 330
LT EE+ +L E
Sbjct: 177 LTPEEQNTILFE 188
>gi|28896932|ref|NP_796537.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|260365880|ref|ZP_05778374.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
K5030]
gi|260877833|ref|ZP_05890188.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AN-5034]
gi|260895518|ref|ZP_05904014.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
Peru-466]
gi|417321028|ref|ZP_12107568.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
10329]
gi|28805140|dbj|BAC58421.1| tRNA methyltransferase [Vibrio parahaemolyticus RIMD 2210633]
gi|308088577|gb|EFO38272.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
Peru-466]
gi|308089712|gb|EFO39407.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AN-5034]
gi|308113480|gb|EFO51020.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
K5030]
gi|328471708|gb|EGF42585.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
10329]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYHRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+++E ++ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVETHNSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|381393448|ref|ZP_09919171.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola punicea DSM
14233 = ACAM 611]
gi|379331006|dbj|GAB54304.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola punicea DSM
14233 = ACAM 611]
Length = 233
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R + ++ R + L++E + NVSA RSADA+GV +H V ++ R
Sbjct: 11 RYHKIRTLLSKRQPDLTLLLEEVHKPHNVSAIIRSADAVGVHRLHAVWENNRPLLRST-- 68
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+MG++ W+D++ + + +S+ ++ TH+ +A+ +D++ PTAIV+G E
Sbjct: 69 -AMGSQVWVDMQRHSSAEDAITYFKSQNMQVLVTHLDQNAVDFRKIDFTKPTAIVLGQEK 127
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQ 325
G + EA+++ D +IPM GMV S NVSVAA ++++ A R + + L+ E+ Q
Sbjct: 128 TGATSEAIAMCDYSIAIPMLGMVQSLNVSVAAALILYEAQRQRDNAGMYEHNRLSEEQAQ 187
Query: 326 ILLAE 330
++L E
Sbjct: 188 LVLFE 192
>gi|78356529|ref|YP_387978.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio alaskensis
G20]
gi|78218934|gb|ABB38283.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio alaskensis
G20]
Length = 196
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER E+ V+ R + LV+ + D NVSA +RS DA GV VH+ D+ R
Sbjct: 8 ERVEKIKRVLSLRQKDLTLVLANIHDPHNVSAIYRSCDAFGVSRVHLYYTDTPFPPLSGR 67
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S A KW++ E + P + LR +G RI T A + + D + PTAI++GNE
Sbjct: 68 S-SASARKWVETERHEDPAQLAAALRKKGCRILATSCSPSARPLREWDMTGPTAIIMGNE 126
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
+RGV E + + D IPM GM+ SFNVSVAA +++ A R T EE
Sbjct: 127 HRGVDAELMEIVDGEVYIPMFGMIQSFNVSVAAAVILSEASRQRQQAGKYETPTYTEEEY 186
Query: 325 QILLAEF 331
+L E+
Sbjct: 187 AAVLEEW 193
>gi|424034421|ref|ZP_17773826.1| tRNA guanosine-2'-O-methyltransferase [Vibrio cholerae HENC-01]
gi|408873024|gb|EKM12231.1| tRNA guanosine-2'-O-methyltransferase [Vibrio cholerae HENC-01]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|163789140|ref|ZP_02183583.1| tRNA/rRNA methyltransferase (SpoU) [Flavobacteriales bacterium
ALC-1]
gi|159875553|gb|EDP69614.1| tRNA/rRNA methyltransferase (SpoU) [Flavobacteriales bacterium
ALC-1]
Length = 218
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 4/191 (2%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
+++E L YL + R+ RF V+ R+ + E + N SA RS D G+Q +++V
Sbjct: 5 KLLEYLDSYLTDNRRTRFKKVLAQRTKHFTVATEDVYQLHNASAVMRSCDVFGIQELNIV 64
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
+SK +R ++MGA+KW+D+ + + + C + L+++GY+I T + + D D
Sbjct: 65 EEVNSKSI--DREIAMGAQKWVDLNRFHSTKSCIDHLKTKGYQIVATTPHAEDCDLIDFD 122
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
+ + G E G+S + + +D IPM G +S N+SV+A I++ H + R
Sbjct: 123 ITKKSCFFFGRETEGLSQQVIDEADCFLKIPMVGFTESLNISVSAAIILQHVTAE--LRK 180
Query: 313 VGCNGDLTSEE 323
LT EE
Sbjct: 181 SEIKWKLTEEE 191
>gi|203283978|ref|YP_002221718.1| spoU protein [Borrelia duttonii Ly]
gi|203287521|ref|YP_002222536.1| spoU protein [Borrelia recurrentis A1]
gi|201083421|gb|ACH93012.1| spoU protein [Borrelia duttonii Ly]
gi|201084741|gb|ACH94315.1| spoU protein [Borrelia recurrentis A1]
Length = 218
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E L+ ++ R+ER V+ NR+ + LV+E + N SAT R+ + LG+ ++H++
Sbjct: 9 IEILAEFITRRRRERIDEVLNNRTNYLTLVLEDIFQSQNASATMRTIEILGLSNIHII-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+++ +Y N V +GA KW+ I + + F L++ GY+I T + +AIS+ D
Sbjct: 67 ETNNKYTLNPGVVLGASKWIGINKYKCVKVAFEHLKANGYKIVATSLDNEAISLEDFPID 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
A+ G E G+S L +DL IPM G S+N+SVA I+ + +
Sbjct: 127 TKMAVFFGTELTGLSHTILQNADLHLKIPMYGFTQSYNLSVAVAIVFYSLI 177
>gi|90581394|ref|ZP_01237189.1| putative tRNA methyltransferase [Photobacterium angustum S14]
gi|90437371|gb|EAS62567.1| putative tRNA methyltransferase [Vibrio angustum S14]
Length = 241
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R +R V+ R + + +E + NVSA R+ADA+GV VH V +
Sbjct: 4 DRFQRIHQVLATRQPDLTVCMEEVHKPNNVSAIIRTADAVGVHKVHAVWPKEGMKVLS-- 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ E L+ +G ++ T++ AI D+D++ PTAI++G E
Sbjct: 62 HTSAGARNWVELDTHDSMVEAVQALKDQGMQVLATNLSDTAIDFRDVDYTKPTAIILGGE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G++ EAL+++D IPM GMV S NVSVA+ ++++ A R N + EK
Sbjct: 122 KNGITAEALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ------NAGMYEREK 175
Query: 325 QIL 327
+L
Sbjct: 176 TLL 178
>gi|350529939|ref|ZP_08908880.1| tRNA guanosine-2'-O-methyltransferase [Vibrio rotiferianus DAT722]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|312882902|ref|ZP_07742634.1| tRNA guanosine-2'-O-methyltransferase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369421|gb|EFP96941.1| tRNA guanosine-2'-O-methyltransferase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 227
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ +H V + R
Sbjct: 4 ERYHRIQQVLKARQADLTLCLEEVHKPNNVSAVIRTADATGLHKIHAVWPNE---MRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+D+E D+ E L+ + ++ T++ A+ D+D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVDVETHDSIDEAVCQLKEQDMQVLVTNLSPTAVDFRDIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G S+ A LSD +PM GMV S NVSVA+ ++++ A R + G + S+
Sbjct: 121 KTGASERAKQLSDQDIIVPMVGMVQSLNVSVASAVVLYEA--QRQRQAAGMYDNEVSQVP 178
Query: 325 QILLAEFSLRHSKSAISIVHEYAKRKETTHMP 356
Q ++ ++ V AKRK + P
Sbjct: 179 QEIIHRLLFERGHPVLAKV---AKRKGLAYPP 207
>gi|228472383|ref|ZP_04057148.1| SpoU protein [Capnocytophaga gingivalis ATCC 33624]
gi|228276251|gb|EEK14986.1| SpoU protein [Capnocytophaga gingivalis ATCC 33624]
Length = 220
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L ++ +ERKERF ++ R+ + +E L N SA R+ + GVQ+ H++
Sbjct: 12 LEEFITQERKERFTQILSQRTEHFTVAIEDLFQVHNTSAVVRTCEVFGVQTAHIIEEKYG 71
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR + ++MGAEKW+ + + C LR +GYRI T A + + D + +
Sbjct: 72 KRL--DSKIAMGAEKWVTTIRYPHTQPCIEALRGQGYRIVATVPPPGATPLQEFDITPKS 129
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
A G E G+S E +S +D +IPM G +S N+SV+ I++ +
Sbjct: 130 AFFFGTERDGLSQEVISQADECLTIPMVGFTESLNISVSVAIILQY 175
>gi|424042994|ref|ZP_17780648.1| tRNA guanosine-2'-O-methyltransferase [Vibrio cholerae HENC-02]
gi|408882444|gb|EKM21265.1| tRNA guanosine-2'-O-methyltransferase [Vibrio cholerae HENC-02]
Length = 227
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|271502622|ref|YP_003335648.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech586]
gi|270346177|gb|ACZ78942.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech586]
Length = 230
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R ++ NR + + +E + NVSA R+ADA+GV VH V S R +
Sbjct: 1 MTPERYTRIREMLNNRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPTS--RMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ ++ L+++G +I T++ DA+ D+D++ PT I++
Sbjct: 59 TLVSTAAGSNSWVQVKTHRTIQDAARHLKTQGMQILATNLSADAVDFRDVDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NG 317
G E G+S EAL+L+D IPM GMV S NVSVA+ ++++ A R +L G +
Sbjct: 119 GQEKTGISGEALALADQDIIIPMIGMVQSLNVSVASALILYEA--QRQRQLAGMYQREDS 176
Query: 318 DLTSEEKQILLAE 330
L EE+Q LL E
Sbjct: 177 PLDEEEQQRLLFE 189
>gi|46911829|emb|CAG18627.1| putative tRNA methyltransferase [Photobacterium profundum SS9]
Length = 267
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 9/216 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R +R +V+ R + + +E + NVSA R+ADA+G+ VH V + R
Sbjct: 34 MTPDRYQRIHSVLATRQPDLTVCMEEVHKPNNVSAIIRTADAVGIHKVHAVWPKENMRVL 93
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
H S GA W++++ D + L+++G +I T++ AI D+D++ PTAI++
Sbjct: 94 S--HTSAGARNWVELDTHDNMVDAITQLKAQGMQILATNLSDTAIDFRDVDYTKPTAIIL 151
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
G E G++ EAL+ +D IPM GMV S NVSVA+ ++++ A R N +
Sbjct: 152 GGEKNGITAEALAQADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ------NAGMYE 205
Query: 322 EEKQILLAEFSLR-HSKSAISIVHEYAKRKETTHMP 356
EK +L E R + ++ + A+RK ++ P
Sbjct: 206 REKTLLPDEVVHRILFERGHPVLAKVARRKRLSYPP 241
>gi|384099155|ref|ZP_10000255.1| putative tRNA/rRNA methyltransferase [Imtechella halotolerans K1]
gi|383833579|gb|EID73030.1| putative tRNA/rRNA methyltransferase [Imtechella halotolerans K1]
Length = 216
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
++ ++++ L ++ E+RK +F+ ++ R+ + +E + N SA RS + GVQ
Sbjct: 1 MADTKLLAYLEEFITEDRKAKFLEILSRRTNHFTVAIEDVYQAHNTSAVIRSCEVFGVQQ 60
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
H+V KR N ++MGA+KW+D+ ++ + C + LR++GY+I T D+ +
Sbjct: 61 AHLVEKRFGKRLDAN--IAMGAQKWVDVYRYNDTQSCIDSLRAKGYKIIATTPHDDSCML 118
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ D S +A G E G+S + + +D IPM+G +S N+SV+A I++ D
Sbjct: 119 DEFDISQKSAFFFGTERLGLSQDVMQQADGFLKIPMEGFTESLNISVSAAIILQ----DI 174
Query: 309 ATRL 312
TRL
Sbjct: 175 TTRL 178
>gi|260902542|ref|ZP_05910937.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AQ4037]
gi|308109724|gb|EFO47264.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AQ4037]
Length = 227
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYHRIHQVLKARQTDLTLCLEEVHKPNNVSAIIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+++E ++ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVETHNSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|89076058|ref|ZP_01162418.1| putative tRNA methyltransferase [Photobacterium sp. SKA34]
gi|89048210|gb|EAR53792.1| putative tRNA methyltransferase [Photobacterium sp. SKA34]
Length = 241
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R +R V+ R + + +E + NVSA R+ADA+GV VH V + +
Sbjct: 4 DRFQRIHQVLATRQPDLTVCMEEVHKPNNVSAIIRTADAVGVHKVHAVWPKENMKVLS-- 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ E L+ +G ++ T++ AI D+D++ PTA+++G E
Sbjct: 62 HTSAGARNWVELDTHDSMVEAVQTLKDQGMQVLATNLSDTAIDFRDVDYTKPTAVILGGE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G++ EAL+++D IPM GMV S NVSVA+ ++++ A R N + EK
Sbjct: 122 KNGITAEALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ------NAGMYEREK 175
Query: 325 QIL 327
+L
Sbjct: 176 TLL 178
>gi|313674753|ref|YP_004052749.1| tRNA/rRNA methyltransferase (spou) [Marivirga tractuosa DSM 4126]
gi|312941451|gb|ADR20641.1| tRNA/rRNA methyltransferase (SpoU) [Marivirga tractuosa DSM 4126]
Length = 231
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
+ + +L +ERK+ +V++NR+ + +V+E + D N +A RS + LG+Q H++
Sbjct: 9 LTQKFGEFLSDERKQFIESVLENRTDFIRVVLEDIRDPHNANAIIRSGECLGIQHYHII- 67
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPR----ECFNVLRSRGYRIATTHVGMDAISVY 249
++ ++ R VS GA KW+D+ + + + + L+S+GY+I T +A +
Sbjct: 68 -ENENVFKLGRGVSRGAIKWVDVHQYPESKTPTADALHDLKSQGYKIVVTSPNKEACAPE 126
Query: 250 DMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
++ P AIV+GNE G+S+EA S++D +PM G +S+NVSVA+GI + V
Sbjct: 127 ELALDQPIAIVMGNERDGISEEAKSMADEFVRLPMHGFTESYNVSVASGITFYSLV 182
>gi|77361707|ref|YP_341282.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas
haloplanktis TAC125]
gi|76876618|emb|CAI87840.1| putative tRNA methyltransferase (tRNA mG18-2'-O-methyltransferase)
[Pseudoalteromonas haloplanktis TAC125]
Length = 228
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 6/175 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + +E + N+SA RSADA+G VH V ++ K
Sbjct: 1 MQQTRYQRIADVLSRRQTDLTVCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPENQKWLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ WL+ L + +R+R +I TH+ DA+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWLETHLHKNIDDAATAMRARNPDIQILATHLSTDAVDFREIDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
+VG E G+S++AL +D IPM+GMV S NVSVAA +++ A R L G
Sbjct: 119 IVGQEKTGISEQALKHADQNIIIPMQGMVQSLNVSVAAALILFEA--QRQRELAG 171
>gi|388602594|ref|ZP_10160990.1| tRNA guanosine-2'-O-methyltransferase [Vibrio campbellii DS40M4]
Length = 227
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKARQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KIGASEQAKRLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|284929527|ref|YP_003422049.1| rRNA methylase [cyanobacterium UCYN-A]
gi|284809971|gb|ADB95668.1| rRNA methylase [cyanobacterium UCYN-A]
Length = 218
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ +R R V+K R + +++E + N+SA R+ DA+G+ +HVV + + +Y
Sbjct: 1 MLYKRHNRIKEVLKKRQPHLTVLIEDVHKPHNLSAIIRTCDAVGILDLHVV--NQNGKYP 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
VS G+EKW+ I + + + N L+ R ++I H AI +++++ P AI++
Sbjct: 59 TFSKVSQGSEKWVFITTYISIDDAINALKRRKFKIYAAHFSKTAIDYRNVNYTEPVAILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
G E GVS EA L D +IPM GMV S NVSVAA +++ A R + L+
Sbjct: 119 GAEKWGVSKEAAQLVDGHITIPMLGMVQSLNVSVAAAVILFEAQRQRLEAKMYTKMQLSP 178
Query: 322 EEKQILLAEFS 332
+L E+S
Sbjct: 179 TTYNKILFEWS 189
>gi|386287387|ref|ZP_10064560.1| tRNA guanosine-2'-O-methyltransferase [gamma proteobacterium
BDW918]
gi|385279519|gb|EIF43458.1| tRNA guanosine-2'-O-methyltransferase [gamma proteobacterium
BDW918]
Length = 231
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 4/169 (2%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R +R V+ R + +V + + N+SA R+ADA G+ S+H V D K Y+ R
Sbjct: 5 RFQRLRQVLAFRQPDLTIVTDNVHKSRNLSAIVRTADAAGIGSMHCVIPD--KDYKAFRG 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+MG+ W+++E L+++GY++ H+G A+ + D++ PT I++G E
Sbjct: 63 TAMGSHSWVNVERKQDVTTALAPLKAQGYQVLAAHLGEGAVDFREPDYTKPTVILMGAEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
GVS +L+D +IPM GMV SFNVSVAAGI++ A R +L G
Sbjct: 123 LGVSPAGCALADAFITIPMMGMVQSFNVSVAAGIIL--AEVQRQRQLAG 169
>gi|407788902|ref|ZP_11136005.1| tRNA guanosine-2'-O-methyltransferase [Gallaecimonas xiamenensis
3-C-1]
gi|407207494|gb|EKE77430.1| tRNA guanosine-2'-O-methyltransferase [Gallaecimonas xiamenensis
3-C-1]
Length = 233
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 105/188 (55%), Gaps = 6/188 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER ER V+ R + L ++ + N+SA R+ADA+G+ VH V ++ R R
Sbjct: 4 ERFERIKQVLALRQPDLTLCMDQVHKGHNLSAAVRTADAVGIHEVHGVFPETGVRMRP-- 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H + G+ W+ + ++ LR++G +I T++ A D+D++ PTA++VG E
Sbjct: 62 HTAGGSLNWVKVHRHRTIQDAVAALRAQGMQIVVTNLSEQAKDFRDIDYTKPTALLVGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC--NGDLTSE 322
+G+S EAL L+D + IPM GMV S NVSVA+ ++++ A R +L G + L
Sbjct: 122 LQGISQEALDLADHQVVIPMLGMVQSLNVSVASALILYEA--QRQRQLAGLYQHCRLPEV 179
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 180 EQQRLLFE 187
>gi|406675021|ref|ZP_11082212.1| hypothetical protein HMPREF1170_00420 [Aeromonas veronii AMC35]
gi|404628159|gb|EKB24945.1| hypothetical protein HMPREF1170_00420 [Aeromonas veronii AMC35]
Length = 243
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +++ R + + +E + N++A R+ADA+G+ VH V + R+
Sbjct: 4 ERFKRITDMLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKG- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G++ W+D++L L++ G +I TH+ ++ +D++ PTAI+VG E
Sbjct: 63 -TARGSQNWVDVKLHPDIGTAVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC---NGDLTS 321
G+ +EAL+L+D IPM GMV S NVSVAA +++ A R L GC LT
Sbjct: 122 KHGIGEEALALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGCYQRGSPLTL 179
Query: 322 EEKQILLAE 330
EE+ +L E
Sbjct: 180 EEQNSILFE 188
>gi|384440253|ref|YP_005654977.1| tRNA guanosine-2'-O-methyltransferase [Thermus sp. CCB_US3_UF1]
gi|359291386|gb|AEV16903.1| tRNA guanosine-2'-O-methyltransferase [Thermus sp. CCB_US3_UF1]
Length = 191
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 4/168 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRY 200
+ E R++R +V+K R + +++E + N+SA RS DA+GV H V+ +
Sbjct: 1 MTEARRKRIEDVLKRRQPDLTVLLENVHKPHNLSAILRSCDAVGVLEAHAVNPTGGVPTF 60
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
E S G+ KW+ + + E F LR RG+R+ T + +A ++D++ PTAI+
Sbjct: 61 NET---SGGSHKWVYLRVHPDIAEAFRFLRERGFRVYATALSREAQDYREVDYTQPTAIL 117
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+G E GVS EAL+L+D IPM GMV S NVSVAA +++ A R
Sbjct: 118 LGAEKWGVSPEALALADGAIQIPMLGMVQSLNVSVAAAVILFEAQRQR 165
>gi|332532739|ref|ZP_08408613.1| tRNA (guanosine18-2'-O-) -methyltransferase [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037766|gb|EGI74216.1| tRNA (guanosine18-2'-O-) -methyltransferase [Pseudoalteromonas
haloplanktis ANT/505]
Length = 228
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + +E + N+SA RSADA+G VH V + K
Sbjct: 1 MQQTRYQRIEDVLSRRQTDLTVCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPEKQKWLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ WL+ L + +R R +I TH+ DA+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWLETHLHRNIDDAVTAMRERNPEIQILATHLSEDAVDFREVDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC-NGD 318
+VG E G+S++AL +D IPM+GMV S NVSVAA +++ A R L G N D
Sbjct: 119 IVGQEKTGISEKALEYADQNIIIPMQGMVQSLNVSVAAALILFEA--QRQRELAGLYNRD 176
Query: 319 LTSEE 323
+ S E
Sbjct: 177 MLSAE 181
>gi|423202942|ref|ZP_17189520.1| hypothetical protein HMPREF1167_03103 [Aeromonas veronii AER39]
gi|404614198|gb|EKB11201.1| hypothetical protein HMPREF1167_03103 [Aeromonas veronii AER39]
Length = 243
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +++ R + + +E + N++A R+ADA+G+ VH V + R+
Sbjct: 4 ERFKRITDMLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKG- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G++ W+D++L L++ G +I TH+ ++ +D++ PTAI+VG E
Sbjct: 63 -TARGSQNWVDVKLHPDIGTAVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC---NGDLTS 321
G+ +EAL+L+D IPM GMV S NVSVAA +++ A R L GC LT
Sbjct: 122 KHGIGEEALALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGCYQRGCPLTQ 179
Query: 322 EEKQILLAE 330
EE+ +L E
Sbjct: 180 EEQNSILFE 188
>gi|145297150|ref|YP_001139991.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142849922|gb|ABO88243.1| tRNA (guanosine-2'-O-)-methyltransferase [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 248
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER +R +++ R + + +E + N++A R+ADA+G+ VH V + R
Sbjct: 1 MTPERFKRISDMLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ + G++ W+D++L L++ G +I TH+ ++ +D++ PTAI+V
Sbjct: 61 KG--TARGSQNWVDVKLHPDIGSAVAELKASGMQIVATHLSESSVDFRTIDYTRPTAILV 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC---NGD 318
G E G+ +EAL+L+D IPM GMV S NVSVAA +++ A R L GC
Sbjct: 119 GQEKHGIGEEALALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGCYQRGCP 176
Query: 319 LTSEEKQILLAE 330
LT EE+ +L E
Sbjct: 177 LTLEEQNTILFE 188
>gi|359431662|ref|ZP_09222086.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20652]
gi|359439881|ref|ZP_09229811.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20429]
gi|359456475|ref|ZP_09245624.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20495]
gi|392535452|ref|ZP_10282589.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas arctica A
37-1-2]
gi|357921700|dbj|GAA58335.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20652]
gi|358038221|dbj|GAA66060.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20429]
gi|358046463|dbj|GAA81873.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20495]
Length = 228
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + +E + N+SA RSADA+G VH V + K
Sbjct: 1 MQQTRYQRIEDVLSRRQTDLTVCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPEKQKWLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ WL+ L + +R R +I TH+ DA+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWLETHLHRNIDDAVTAMRERNPEIQILATHLSEDAVDFREVDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC-NGD 318
+VG E G+S++AL +D IPM+GMV S NVSVAA +++ A R L G N D
Sbjct: 119 IVGQEKTGISEKALEYADQNIIIPMQGMVQSLNVSVAAALILFEA--QRQRELAGLYNRD 176
Query: 319 LTSEE 323
+ S E
Sbjct: 177 MLSAE 181
>gi|261250548|ref|ZP_05943123.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|417953408|ref|ZP_12596454.1| tRNA guanosine-2'-O-methyltransferase [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|260939117|gb|EEX95104.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|342817282|gb|EGU52166.1| tRNA guanosine-2'-O-methyltransferase [Vibrio orientalis CIP 102891
= ATCC 33934]
Length = 227
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH V R
Sbjct: 4 ERYNRIQQVLKARQADLTLCLEEVHKPNNVSAVIRTADATGIHKVHAVW---PHEMRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W+D+E D + L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVDVETHDNIEDAIAELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L+D +PM GMV S NVSVA+ ++++ A R
Sbjct: 121 KVGASEKAKQLADQDIIVPMVGMVQSLNVSVASAVILYEAQRQR 164
>gi|90412684|ref|ZP_01220685.1| putative tRNA methyltransferase [Photobacterium profundum 3TCK]
gi|90326259|gb|EAS42678.1| putative tRNA methyltransferase [Photobacterium profundum 3TCK]
Length = 234
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R +R +V+ R + + +E + NVSA R+ADA+GV VH V + R
Sbjct: 1 MTPDRYQRIHSVLATRQPDLTVCMEEVHKPNNVSAIIRTADAVGVHKVHAVWPKENMRVL 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
H S GA W++++ D + L+++G ++ T++ AI D+D++ PTAI+
Sbjct: 61 S--HTSAGARNWVELDTHDNMVDAITHLKAQGMQVLATNLSDTAIDFRDVDYTKPTAIIF 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
G E G++ EAL+++D IPM GMV S NVSVA+ ++++ A R N +
Sbjct: 119 GGEKNGITAEALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ------NAGMYE 172
Query: 322 EEKQILLAEFSLR 334
EK +L E R
Sbjct: 173 REKTLLPNEVVHR 185
>gi|88803205|ref|ZP_01118731.1| spoU protein [Polaribacter irgensii 23-P]
gi|88780771|gb|EAR11950.1| spoU protein [Polaribacter irgensii 23-P]
Length = 225
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 113/217 (52%), Gaps = 8/217 (3%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
+++ +L E RK+ F V++NR+ +V+E + N SA R+ D G+Q VH +
Sbjct: 6 LLKYFESFLTENRKKLFQKVLENRTRHFTVVLEDIFQPHNASAVVRTCDIFGIQDVHAI- 64
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELW----DAPRECFNVLRSRGYRIATTHVGMDAISVY 249
++ + +RHV+ G++KWL+ + D +EC + L+ +GY+I T ++ +
Sbjct: 65 -ENKYNTKVSRHVAKGSQKWLNQYRYRSDGDNTKECLDGLKEKGYQIIATSPHNNSCVLQ 123
Query: 250 DMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
D D++ TA V G E GVSD + +D IPM G +S N+SVAA I++
Sbjct: 124 DFDFTKKTAFVFGVEAEGVSDCVIENADGFLKIPMVGFTESLNISVAAAIILQEVTA--K 181
Query: 310 TRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEY 346
R L+ EEK++L ++ + K+ +I Y
Sbjct: 182 LRNSNVAWKLSKEEKRLLYFDWVKKTIKNVSNIEAHY 218
>gi|410030531|ref|ZP_11280361.1| rRNA methylase [Marinilabilia sp. AK2]
Length = 227
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 14/165 (8%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
LMEE V+ R+ +V+E + N SA R+AD G+Q +HV+ ++S Y+
Sbjct: 23 LMEE-------VLDKRTRYFTVVLENIYKPHNASAVLRTADCFGLQDIHVIEKENS--YK 73
Query: 202 ENRHVSMGAEKWLDI-----ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP 256
N +V+ GA +W+D+ E +A +CF+ LR +GY+I T +IS++++
Sbjct: 74 INPYVTRGASQWVDLFKYSNENGNAVSDCFHQLRRKGYKIMATSPKAGSISIHELRPDQK 133
Query: 257 TAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
A+V GNE+ GVS E L +D IPM G +SFN+SVAA I +
Sbjct: 134 LALVFGNEHEGVSQEILDQADGLVHIPMHGFTESFNISVAASIFL 178
>gi|156936176|ref|YP_001440092.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii ATCC
BAA-894]
gi|156534430|gb|ABU79256.1| hypothetical protein ESA_04075 [Cronobacter sakazakii ATCC BAA-894]
Length = 229
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + N L++RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRNISDAVNHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EALSL+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITEEALSLADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSTLPEK 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|254429253|ref|ZP_05042960.1| RNA methyltransferase, TrmH family [Alcanivorax sp. DG881]
gi|196195422|gb|EDX90381.1| RNA methyltransferase, TrmH family [Alcanivorax sp. DG881]
Length = 230
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R + R + ++++G+ N++A R+ DA+G+ VH V R R
Sbjct: 1 MTPERYRRICETLDRRQPDLTVIMDGVHKPHNIAAIVRTCDAVGILDVHAVL--PKNRAR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+MG+++W+ + D + L+ +G ++ H+ DAI ++D++ PTA+++
Sbjct: 59 MAAGTAMGSQRWVQVHKRDESTDVIRELQGQGVQVLAAHLSDDAIPYREVDYTRPTALLL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
G E GVSDE S+ D +IPM GMV+SFNVSVAA I++ A
Sbjct: 119 GTEKFGVSDEVASVVDQNVTIPMMGMVESFNVSVAAAIILSEA 161
>gi|390944443|ref|YP_006408204.1| rRNA methylase [Belliella baltica DSM 15883]
gi|390417871|gb|AFL85449.1| rRNA methylase [Belliella baltica DSM 15883]
Length = 232
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 122/218 (55%), Gaps = 10/218 (4%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E + LS Y+ + ++ R+ +V+E + N SA R+AD G+Q V+++
Sbjct: 7 EFLIYLSGYITPHKMALMEEILAKRTRYFTVVLEDIYKPHNASAVLRTADCFGIQDVYII 66
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELW-----DAPRECFNVLRSRGYRIATTHVGMDAIS 247
+ + Y+ N +V+ GA +W+DI + +A C + L+ +G++I T ++IS
Sbjct: 67 --EKEQEYKVNPYVTRGAAQWVDIHKYSNYGGNAVTCCVSDLKKKGFKIYATSPRAESIS 124
Query: 248 VYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCD 307
++D++ TA+V GNE+ GVS+E +S +D IPM G +SFN+SVAA I + +
Sbjct: 125 IHDLNVDEKTALVFGNEHEGVSEEMISQADGLVHIPMDGFTESFNISVAASIFLLD-LQR 183
Query: 308 RATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHE 345
+A+ L + LT EK++L +++ K+ S++HE
Sbjct: 184 KASALDLPDFYLTEAEKEVLRSKWYRDIVKN--SVLHE 219
>gi|161936340|ref|YP_128429.2| tRNA guanosine-2'-O-methyltransferase [Photobacterium profundum
SS9]
Length = 234
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 9/216 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R +R +V+ R + + +E + NVSA R+ADA+G+ VH V + R
Sbjct: 1 MTPDRYQRIHSVLATRQPDLTVCMEEVHKPNNVSAIIRTADAVGIHKVHAVWPKENMRVL 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
H S GA W++++ D + L+++G +I T++ AI D+D++ PTAI++
Sbjct: 61 S--HTSAGARNWVELDTHDNMVDAITQLKAQGMQILATNLSDTAIDFRDVDYTKPTAIIL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
G E G++ EAL+ +D IPM GMV S NVSVA+ ++++ A R N +
Sbjct: 119 GGEKNGITAEALAQADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ------NAGMYE 172
Query: 322 EEKQILLAEFSLR-HSKSAISIVHEYAKRKETTHMP 356
EK +L E R + ++ + A+RK ++ P
Sbjct: 173 REKTLLPDEVVHRILFERGHPVLAKVARRKRLSYPP 208
>gi|94499900|ref|ZP_01306436.1| putative tRNA/rRNA methyltransferase [Bermanella marisrubri]
gi|94428101|gb|EAT13075.1| putative tRNA/rRNA methyltransferase [Oceanobacter sp. RED65]
Length = 229
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER +R ++++ R + L+ + + N+SA RS DA V ++VV Y+
Sbjct: 1 MTPERVQRMHDILRKRQPDLTLITDAVFKPHNLSAIIRSCDAFAVNELNVVW--PYDDYQ 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R +MG++++++++ + + +GY+I H A+ YD+D++ PTAIV+
Sbjct: 59 TFRGRAMGSQQYVNVKTHKDVSQAIQGFKQQGYQIVAAHFCDQAVPHYDIDYTKPTAIVM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
G E GVS +A+ L D +PM+GMV S NVSVAA +++ A+ R + + L S
Sbjct: 119 GAEKNGVSAKAMDLVDHSIIVPMEGMVQSLNVSVAAALILSEAMHQRKNKGMLGENQLDS 178
Query: 322 EEKQILLAEF 331
E QI E+
Sbjct: 179 ETYQIQFFEW 188
>gi|407793544|ref|ZP_11140577.1| tRNA guanosine-2'-O-methyltransferase [Idiomarina xiamenensis
10-D-4]
gi|407214621|gb|EKE84465.1| tRNA guanosine-2'-O-methyltransferase [Idiomarina xiamenensis
10-D-4]
Length = 233
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 106/189 (56%), Gaps = 8/189 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV-SCDSSKRYREN 203
ER +R ++ R + L +E + N++A RSADA+GV VH V C K+ R +
Sbjct: 4 ERYQRINQMLDQRQLDLTLCLENVHKQHNLAAVVRSADAVGVHDVHAVWHC---KKSRIS 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
++G++ W+ + + + ++ +G +I TH+ A+ ++D++ PTAI++G
Sbjct: 61 GGTALGSQNWVRVHKHRSIDDALQTIKQQGMQIVVTHLSDSAVDFREIDYTRPTAILLGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC--NGDLTS 321
E GVS++AL+ +D + IPM GMV S NVSVA ++++ A R +L G L+
Sbjct: 121 EKYGVSEQALAAADQQVVIPMLGMVQSLNVSVAGAVMLYEA--QRQRQLAGMYQRPQLSE 178
Query: 322 EEKQILLAE 330
E+Q +L E
Sbjct: 179 AERQRVLFE 187
>gi|91224994|ref|ZP_01260253.1| tRNA methyltransferase [Vibrio alginolyticus 12G01]
gi|91190240|gb|EAS76510.1| tRNA methyltransferase [Vibrio alginolyticus 12G01]
Length = 227
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + L +E + NVSA R+ADA G+ VH + D + R
Sbjct: 4 ERYNRIHQVLKTRQTDLTLCLEEVHKPNNVSAVIRTADATGLHKVHAIWPD---KMRTLS 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ D+ L+++G ++ T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHDSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTRPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S++A L++ IPM GMV S NVSVA+ ++++ A R
Sbjct: 121 KVGASEQAKQLAEQDIIIPMVGMVQSLNVSVASAVILYEAQRQR 164
>gi|295133953|ref|YP_003584629.1| TrmH family tRNA/rRNA methyltransferase [Zunongwangia profunda
SM-A87]
gi|294981968|gb|ADF52433.1| TrmH family tRNA/rRNA methyltransferase [Zunongwangia profunda
SM-A87]
Length = 217
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
++ L +L + RK V+ R+ + + + + N SA RS D G+Q++HV+
Sbjct: 6 LISYLEDFLTDRRKSLIKKVIDQRTNHITVATQDVYQLHNTSAVIRSCDVFGIQNIHVIE 65
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
KR +R ++MGA+KW+ + + +EC + +R GY+I T D++ + D D
Sbjct: 66 EKFPKRI--DREIAMGAQKWVSVNRHASAKECISHVREMGYQIVATSPHDDSLHLGDFDI 123
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
+ +A+ G E G+S E + +D IPM G +S N+SV+A I++ R
Sbjct: 124 TKKSALFFGTERYGLSQEIIDEADCTLKIPMYGFTESLNISVSAAIILQSLA--EKMRKD 181
Query: 314 GCNGDLTSEEKQILLAEF---SLRHSKSAISIVHEYAK 348
L +EK+ L E+ +L++S IS H Y+K
Sbjct: 182 DVKWQLNEQEKEALKFEWLKNNLKNSTELIS--HFYSK 217
>gi|429120510|ref|ZP_19181185.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
680]
gi|426325024|emb|CCK11922.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
680]
Length = 229
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + + L++RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRNISDAVSHLKARGMQILATHLSDKAVDFREIDYTRPTCILLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EALSL+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITEEALSLADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSTLPEE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|218288912|ref|ZP_03493163.1| tRNA/rRNA methyltransferase (SpoU) [Alicyclobacillus acidocaldarius
LAA1]
gi|218241001|gb|EED08178.1| tRNA/rRNA methyltransferase (SpoU) [Alicyclobacillus acidocaldarius
LAA1]
Length = 249
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
V+ R+ + + +E + D N +A RSA+A GVQ HV + + ++ ++ V+ GA K
Sbjct: 37 VLMRRTGYIAVAMEAVDDGHNQAAILRSAEAFGVQ--HVAVIEGKQPFQPSKGVTQGAHK 94
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
WL I + + L +RG+++ T +G A + +D + PTAI+ GNE GVS EA
Sbjct: 95 WLTIHRMPSVGRAIDALHARGFQVYATDLGDGAEPIDAVDLARPTAILFGNEKDGVSPEA 154
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFS 332
+D R IPM G V SFNVSVAA I ++ + RA G L ++E+ L +
Sbjct: 155 RERADGRFYIPMAGFVQSFNVSVAAAIALYE-LTRRARETAGDRYALDADERHRLYVTWC 213
Query: 333 LRHSKSAISIVHEYAKRK 350
LR A E A+R+
Sbjct: 214 LRSLHGA---TREEARRR 228
>gi|20808975|ref|NP_624146.1| rRNA methylase [Thermoanaerobacter tengcongensis MB4]
gi|20517641|gb|AAM25750.1| rRNA methylase [Thermoanaerobacter tengcongensis MB4]
Length = 210
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 107/186 (57%), Gaps = 4/186 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++E+R +RF V++ R + + V+ +++ N SA R+ DA+GV V+ S ++ K
Sbjct: 8 VLEDRLKRFYEVLQKRQKDLVVFVDDVTNEHNFSAILRTCDAVGVMRVYYFS-EAKKGIE 66
Query: 202 ENRHVSMGAEKWLDIE-LWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
N VSM A +WL IE ++D + + ++ T + + +++++ PT +V
Sbjct: 67 INEAVSMAANRWLFIERVYDREKAIKEIKERENLQVVVTWLDESSKDFREINYTKPTLLV 126
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLT 320
VGNE +GVS++ L+L+D R IPM GMV S NVSVA GI+++ A+ R + G T
Sbjct: 127 VGNELKGVSEDILNLADERIVIPMMGMVQSLNVSVATGIILYEALRQRLDK--GMYLKPT 184
Query: 321 SEEKQI 326
EK+I
Sbjct: 185 LSEKEI 190
>gi|407698372|ref|YP_006823159.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Black Sea 11']
gi|407247519|gb|AFT76704.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Black Sea 11']
Length = 235
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 98/183 (53%), Gaps = 3/183 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R V++ R + + +E + NVSA R+ DA+G+ VH V K+Y+ R
Sbjct: 4 ERYQRIRQVLERRQTDLTVCLENVHKPHNVSAVVRTCDAVGIHRVHTVW---EKKYQFRR 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+++W+ D + L+ + ++ TH+ A+ D+D++ PTAI+ G E
Sbjct: 61 GTAMGSQQWVRQTNHDNINDAMAELKGQSMQVLVTHLSDTAVDFRDIDYTKPTAILFGQE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G +DEA +++D IPM GMV S NVSVAA ++++ A R + L EE
Sbjct: 121 KYGATDEAKAMADHDIVIPMMGMVQSLNVSVAAALVLYEAQRQRTIAGMYNTQQLPEEEC 180
Query: 325 QIL 327
Q L
Sbjct: 181 QAL 183
>gi|417791982|ref|ZP_12439395.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii E899]
gi|429117399|ref|ZP_19178317.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
701]
gi|449310275|ref|YP_007442631.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii SP291]
gi|333953967|gb|EGL71856.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii E899]
gi|426320528|emb|CCK04430.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
701]
gi|449100308|gb|AGE88342.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii SP291]
Length = 229
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + + L++RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRNISDAVSHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EALSL+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITEEALSLADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSTLPEE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|85711929|ref|ZP_01042984.1| rRNA methylase SpoU [Idiomarina baltica OS145]
gi|85694326|gb|EAQ32269.1| rRNA methylase SpoU [Idiomarina baltica OS145]
Length = 230
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R ++ R + +V+EG+ N+SA R+ADA+GV +H + S R
Sbjct: 4 ERYQRITEMLAFRQPDLTVVMEGVHKHHNLSAVVRTADAVGVHEMHAIWLSSKMRVSGG- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
++G++ W+++ ++ +G ++ TH+ A+ ++D++ PTAI++G E
Sbjct: 63 -TALGSQNWVNVHHHSQLSPAVEQIKQQGMQVVVTHLSDQAVDFREIDYTQPTAILLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G ++EAL ++D IPM GMV S NVSVA ++++ A R
Sbjct: 122 KHGATEEALKIADHHVKIPMVGMVQSLNVSVAGAVMLYEAQRQR 165
>gi|300725268|ref|YP_003714597.1| tRNA /rRNA methyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297631814|emb|CBJ92535.1| putative tRNA/rRNA methyltransferase [Xenorhabdus nematophila ATCC
19061]
Length = 235
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 8/190 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ +H + D S R + +
Sbjct: 4 KRYARICQMMAMRQPDLTICLEEVHKPHNVSAVIRTADAIGIHQIHAIWPDQSLRTQLSS 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ ++ +S G ++ TH+ A+ +D++ PT I++G E
Sbjct: 64 --AAGSNSWVQVQTHSTIQQAIEQFKSDGMQVLATHLSDKAVDFRQIDYTKPTCIIMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDLT 320
+G+S +A++L+D IPM GMV S NVSVA+ ++++ A R +LVG L+
Sbjct: 122 KKGISKQAVALADHDIIIPMAGMVQSLNVSVASALILYEA--QRQRQLVGMYQREESILS 179
Query: 321 SEEKQILLAE 330
EE+Q LL E
Sbjct: 180 EEEQQKLLFE 189
>gi|406955186|gb|EKD83759.1| rRNA methylase SpoU [uncultured bacterium]
Length = 232
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Query: 149 RFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM 208
R + R + + ++G+ D N+SA RSADA G+ V + D K + N VS
Sbjct: 9 RIAKAIHQRQLDIVVALDGVHDQHNLSAVLRSADATGLGRV-LWYPDIKKPEKLNPEVSK 67
Query: 209 GAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGV 268
G+E+W+ +E DA L+ +GY+IA TH+ +A+ +DW+ P +V GNE RG
Sbjct: 68 GSERWVALETVDALTPHLLDLKKQGYKIAATHMAREAVDYRTVDWTTPWVVVFGNEQRGC 127
Query: 269 SDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
S+ + ++D +PM G V S N+SVAA + +
Sbjct: 128 SEATIEVADANIFLPMMGFVQSLNISVAAAVTFY 161
>gi|110833674|ref|YP_692533.1| RNA methyltransferase [Alcanivorax borkumensis SK2]
gi|110646785|emb|CAL16261.1| RNA methyltransferase, TrmH family, group 3 [Alcanivorax
borkumensis SK2]
Length = 230
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R + + R + ++++G+ N++A R+ DA+G+ VH V R R
Sbjct: 1 MTPERYRRICDTLDRRQPDLTVIMDGVHKPHNIAAIVRTCDAVGILDVHAVL--PKNRAR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+MG+++W+ + D + L+ +G ++ H+ DAI +D++ PTA+++
Sbjct: 59 MAAGTAMGSQRWVQVHKRDESTDVIRELQGQGVQVLAAHLSDDAIEYRQVDYTRPTALLL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
G E GVSDE S D +IPM GMV+SFNVSVAA I++ A
Sbjct: 119 GTEKFGVSDEVASAVDQNVTIPMMGMVESFNVSVAAAIILSEA 161
>gi|330827726|ref|YP_004390678.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas veronii B565]
gi|423211600|ref|ZP_17198133.1| hypothetical protein HMPREF1169_03651 [Aeromonas veronii AER397]
gi|328802862|gb|AEB48061.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas veronii B565]
gi|404613259|gb|EKB10292.1| hypothetical protein HMPREF1169_03651 [Aeromonas veronii AER397]
Length = 243
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +++ R + + +E + N++A R+ADA+G+ VH V + R+
Sbjct: 4 ERFKRITDMLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKG- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G++ W+D++L L++ G +I TH+ ++ +D++ PTAI+VG E
Sbjct: 63 -TARGSQNWVDVKLHPDIGTAVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC---NGDLTS 321
G+ +EAL+L+D IPM GMV S NVSVAA +++ A R L GC LT
Sbjct: 122 KHGIGEEALALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGCYQRGCPLTL 179
Query: 322 EEKQILLAE 330
EE+ +L E
Sbjct: 180 EEQNSILFE 188
>gi|372270672|ref|ZP_09506720.1| tRNA guanosine-2'-O-methyltransferase [Marinobacterium stanieri
S30]
Length = 234
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 95/167 (56%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER+++ ++V++ R + L+ E + N+SA R+ DA GV V VV + Y
Sbjct: 1 MTPEREQKLLSVLQRRQPDLTLIAEQVHKPRNISALIRNCDAAGVPEVQVVK--PKEGYH 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R ++G+++W+D L + + + +R++G +I H +A+ ++D++ P AI++
Sbjct: 59 NYRGTALGSDRWVDTALHETLDDAVDKVRAQGMKIYAAHFSDEAVPYREVDYTQPCAIIM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E G+S A L+D IPM+G+V S NVS AAGI++ + R
Sbjct: 119 GAEKEGISPRAAELADAHIIIPMQGVVSSLNVSTAAGIILAEVIDQR 165
>gi|46580760|ref|YP_011568.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio vulgaris
str. Hildenborough]
gi|387154028|ref|YP_005702964.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris RCH1]
gi|46450180|gb|AAS96828.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio vulgaris
str. Hildenborough]
gi|311234472|gb|ADP87326.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 196
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R V+ R + LV+ + D NVSA +RS DA GV VH+ D++
Sbjct: 5 ITPERLARLRKVLSWRQKDLTLVLANIHDPHNVSAIYRSCDAFGVAQVHLYYTDTAFPSL 64
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S A KW+D + LR+ G+++ T A V D D + PTAI++
Sbjct: 65 SGK-TSASARKWVDTVRHQDRDSLMSTLRASGHQVLATSCSPVAKPVADYDLTRPTAIIM 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GVS E + + D IPM GM+ SFNVSVAA IL+ A R + T
Sbjct: 124 GNEHSGVSQELVDVVDGEVYIPMYGMIQSFNVSVAAAILLSEASRQRVVAGMYAKSTYTD 183
Query: 322 EEKQILLAEF 331
EE + LA++
Sbjct: 184 EEFEARLAQW 193
>gi|116073311|ref|ZP_01470573.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. RS9916]
gi|116068616|gb|EAU74368.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. RS9916]
Length = 229
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER V+ R ++ +++E + N+SA RS DA+G H VS R R
Sbjct: 3 LLPRRFERLKAVLDGRMANLTVLLEHVEKPHNLSAILRSCDAVGALEAHAVSLQG--RPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAP--RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
+ G++KW + L+D P + L+++G+++ TH+G++A D D++ PTA
Sbjct: 61 TFNSTAQGSQKW--VPLYDHPSTEDAVQQLKAKGFKLYGTHLGVNAKDYRDCDFTGPTAF 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
V+G E G+SD A L D IPM GMV S NVSVAA L+ AV R
Sbjct: 119 VLGAEKWGLSDTARDLMDEAVFIPMTGMVQSLNVSVAAATLLFEAVRQR 167
>gi|423316635|ref|ZP_17294540.1| hypothetical protein HMPREF9699_01111 [Bergeyella zoohelcum ATCC
43767]
gi|405583299|gb|EKB57260.1| hypothetical protein HMPREF9699_01111 [Bergeyella zoohelcum ATCC
43767]
Length = 231
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
+V E LS +L EER E+ + S + V+E + F N +A RS +A G V V
Sbjct: 12 KVFEYLSGFLTEERLEKINHFALTSSAYILPVLEDVYQFRNAAAIVRSVEACGFHKV--V 69
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
+ + N V+ GA+ W+++E + V++ RGYR+ +A S+ D
Sbjct: 70 ALQDKNSFEPNIKVTKGADTWVEVEKMPLTKASLQVIKDRGYRLVAVSPERNATSLPDFS 129
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
PTA++ G E +GVS++AL ++D IPM G +SFNVSVAA I M+
Sbjct: 130 IQQPTALLFGTEWKGVSEDALEMADETLMIPMYGWTNSFNVSVAAAICMY 179
>gi|423204629|ref|ZP_17191185.1| hypothetical protein HMPREF1168_00820 [Aeromonas veronii AMC34]
gi|404625953|gb|EKB22764.1| hypothetical protein HMPREF1168_00820 [Aeromonas veronii AMC34]
Length = 243
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +++ R + + +E + N++A R+ADA+G+ VH V + R+
Sbjct: 4 ERFKRITDMLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKG- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G++ W+D++L L++ G +I TH+ ++ +D++ PTAI+VG E
Sbjct: 63 -TARGSQNWVDVKLHPDIGTAVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC---NGDLTS 321
G+ +EAL+L+D IPM GMV S NVSVAA +++ A R L GC LT
Sbjct: 122 KHGIGEEALALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGCYQRGCPLTL 179
Query: 322 EEKQILLAE 330
EE+ +L E
Sbjct: 180 EEQNSILFE 188
>gi|120601954|ref|YP_966354.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris DP4]
gi|120562183|gb|ABM27927.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris DP4]
Length = 196
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R V+ R + LV+ + D NVSA +RS DA GV VH+ D++
Sbjct: 5 ITPERLARLRKVLSWRQKDLTLVLANIHDPHNVSAIYRSCDAFGVAQVHLYYTDTAFPAL 64
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S A KW+D + LR+ G+++ T A V D D + PTAI++
Sbjct: 65 SGK-TSASARKWVDTVRHQDRDSLMSTLRASGHQVLATSCSPVAKPVADYDLTRPTAIIM 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ GVS E + + D IPM GM+ SFNVSVAA IL+ A R + T
Sbjct: 124 GNEHSGVSQELVDVVDGEVYIPMYGMIQSFNVSVAAAILLSEASRQRVVAGMYAKPTYTD 183
Query: 322 EEKQILLAEF 331
EE + LA++
Sbjct: 184 EEFEARLAQW 193
>gi|87303170|ref|ZP_01085968.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. WH 5701]
gi|87282337|gb|EAQ74297.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. WH 5701]
Length = 229
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER V+ R + +V+E + N+SA RS DA+GV HVVS R R
Sbjct: 3 LLPRRFERIRAVLDRRMADLTVVLEAVDKPHNLSAILRSCDAVGVLEAHVVSLKG--RPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + + E L+ +G+R+ T +G DA+ D++ PTA ++
Sbjct: 61 TFNSTAQGSQKWVPLRPHERVEEVLGQLKQQGFRLYGTQLGTDAVDYRQCDFTGPTAFLL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD-L 319
G E G+S+ A ++ D IP GMV S NVSVAA +L+ A+ R A LV G+ L
Sbjct: 121 GAEKWGLSEAAAAMVDQALFIPTGGMVQSLNVSVAAAVLLFEALRQRQAEGLVPEAGEGL 180
Query: 320 TSEEKQILLAEFS 332
+ ++ LL E++
Sbjct: 181 PAGAREGLLFEWA 193
>gi|288932987|ref|YP_003437046.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella variicola At-22]
gi|290511781|ref|ZP_06551149.1| tRNA (guanosine-2'-O-)-methyltransferase [Klebsiella sp. 1_1_55]
gi|288887716|gb|ADC56034.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella variicola At-22]
gi|289775571|gb|EFD83571.1| tRNA (guanosine-2'-O-)-methyltransferase [Klebsiella sp. 1_1_55]
Length = 229
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 KRYERICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAVW--PSSRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ +G +I TH+ AI ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIADAVGHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSMLPPE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|33866213|ref|NP_897772.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH
8102]
gi|33639188|emb|CAE08196.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. WH 8102]
Length = 229
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+ +R + +++E + N+SA RS DA+G H+VS R R
Sbjct: 3 LLPRRFERLKSVLNHRMADLTVLLEHVEKPHNLSAILRSCDAVGALEAHIVSLQG--RTR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + L+ RG+R+ TH+G++A D D++ PTA V+
Sbjct: 61 TFNSTAQGSQKWVPLNDHPTIETAIGSLKDRGFRVYGTHLGVEAKDYRDCDFTGPTAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD-L 319
G E G++D A L D IPM+GMV S NVSVA L+ A+ R A G+ L
Sbjct: 121 GAEKWGLTDRARDLMDEALFIPMRGMVQSLNVSVATATLLFEALRQRQAAGTAPSQGEGL 180
Query: 320 TSEEKQILLAEFS 332
+++ LL E+S
Sbjct: 181 SADHYTKLLFEWS 193
>gi|429106812|ref|ZP_19168681.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter malonaticus
681]
gi|429112229|ref|ZP_19173999.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter malonaticus
507]
gi|426293535|emb|CCJ94794.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter malonaticus
681]
gi|426313386|emb|CCK00112.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter malonaticus
507]
Length = 229
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L++RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRNISDAVGHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EALSL+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITEEALSLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSTLPEE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|206577394|ref|YP_002235981.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae 342]
gi|206566452|gb|ACI08228.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae 342]
Length = 229
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 KRYERICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAVW--PSSRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ +G +I TH+ AI ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIADAVGHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSMLPPE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|444376912|ref|ZP_21176150.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Enterovibrio sp. AK16]
gi|443679037|gb|ELT85699.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Enterovibrio sp. AK16]
Length = 207
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
N+SA R+ADA+GV VH V SK R S GA W+D+ D E F L+++
Sbjct: 9 NISAIIRTADAVGVHQVHAVWPKDSK-MRALGGTSAGARNWVDVVTHDNTPEAFETLKAK 67
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I T++ A+ ++D++ PTAIV+G E G+S +AL L+D IPM GMV S N
Sbjct: 68 GMQILVTNLSDTAVDFREIDYTKPTAIVMGQEKTGISKQALELADQDIIIPMIGMVQSLN 127
Query: 293 VSVAAGILMHHAVCDR 308
VSVA+ ++++ A R
Sbjct: 128 VSVASALILYEAQRQR 143
>gi|56180485|gb|AAV83207.1| rRNA methylase SpoU [Idiomarina loihiensis L2TR]
Length = 215
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++ R + +V+E + N+SA RSADA+GV +H + +K+ R + ++G++
Sbjct: 1 MLDKRQPDLTVVMENVHKNHNLSAVVRSADAIGVHEMHAIWL--TKKARLSGGTALGSQN 58
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
W+ I E + RG ++ TH+ ++ ++D++ PTAI++G E GV+DEA
Sbjct: 59 WVKIHNHKTVGEALEATQGRGMQVVVTHLSEHSVDFREVDYTKPTAILLGQEKYGVTDEA 118
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAE 330
L ++D IPM GMV S NVSVA ++++ A R + +++EE+ +L E
Sbjct: 119 LDIADYHVMIPMVGMVQSLNVSVAGAVMLYEAQRQREQAGLYDKTHISAEERHRVLFE 176
>gi|421496387|ref|ZP_15943619.1| trmH [Aeromonas media WS]
gi|407184651|gb|EKE58476.1| trmH [Aeromonas media WS]
Length = 258
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 4/171 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +++ R + + +E + N++A R+ADA+G+ VH V + R+
Sbjct: 14 ERFKRISDMLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKG- 72
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G++ W+D++L L++ G +I TH+ ++ +D++ PTAI+VG E
Sbjct: 73 -TARGSQNWVDVKLHPDIGSAVAELKASGMQILATHLSESSVDFRAIDYTKPTAILVGQE 131
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC 315
G+ +EAL+L+D IPM GMV S NVSVAA +++ A R +L GC
Sbjct: 132 KHGIGEEALALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRQLAGC 180
>gi|291619492|ref|YP_003522234.1| TrmH [Pantoea ananatis LMG 20103]
gi|291154522|gb|ADD79106.1| TrmH [Pantoea ananatis LMG 20103]
Length = 233
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + + +E + NVSA R+ADA+G+ VH V S+R R
Sbjct: 4 QRFARIQEMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSQRMRTQA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S G+ W+++ + + + L+++ +I T++ DA+ ++D++ PT I++G E
Sbjct: 62 SASAGSNSWVNVVTHRSINDAISHLKTQNMQILATNLSADAVDFREIDYTKPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++DEAL+L+D IPM GMV S NVSVA+ ++++ A R A L E
Sbjct: 122 KTGITDEALALADRHIIIPMVGMVQSLNVSVASALILYEAQRQRQNAGMYQRQTSLLAPE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|386859280|ref|YP_006271986.1| SpoU protein [Borrelia crocidurae str. Achema]
gi|384934161|gb|AFI30834.1| SpoU protein [Borrelia crocidurae str. Achema]
Length = 218
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E L+ ++ R+ER V+ NR+ + LV+E + N SAT R+ + LG+ ++H++
Sbjct: 9 IEILAEFITRRRRERIDEVLNNRTNYLTLVLEDIFQSQNASATMRTIEILGLSNIHII-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+++ +Y N V +GA KW+ I + + F L++ GY+I T + AIS+ +
Sbjct: 67 ETNNKYTLNPGVVLGASKWIGINKYKCVKVAFEHLKANGYKIVATSLDNAAISLEEFPID 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
A+ G E G+S L +DL IPM G S+N+SVA I+ + +
Sbjct: 127 TKMAVFFGTELTGLSHTILQNADLHLKIPMYGFTQSYNLSVAVAIVFYSLI 177
>gi|386347268|ref|YP_006045517.1| tRNA/rRNA methyltransferase SpoU [Spirochaeta thermophila DSM 6578]
gi|339412235|gb|AEJ61800.1| tRNA/rRNA methyltransferase (SpoU) [Spirochaeta thermophila DSM
6578]
Length = 249
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L+ ++ R R VVK R+ + +V+E + N +A RSA+A+G+Q VH+V + +
Sbjct: 16 LARWVTPRRFRRMQEVVKERTRYITVVLENIYHPHNANAVLRSAEAMGLQDVHIV--EDA 73
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS--- 254
+ ++ VSMG +WL + + PR + LR GYRI T V + D +
Sbjct: 74 VPFTPSKGVSMGTARWLSLHRYQDPRVAVSRLREEGYRIIATTPHRTPTPVDEFDVTRGK 133
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
C A G E G+SD L +D +IPM G V+S N+SV AGI++H+ V + R
Sbjct: 134 C--AFFFGGELPGLSDAVLEAADEYLTIPMYGFVESLNISVTAGIVLHNVV--QRLRKTD 189
Query: 315 CNGDLTSEEKQILL 328
LTS E++ LL
Sbjct: 190 IPWRLTSSEQEALL 203
>gi|193212564|ref|YP_001998517.1| tRNA guanosine-2'-O-methyltransferase [Chlorobaculum parvum NCIB
8327]
gi|193086041|gb|ACF11317.1| tRNA guanosine-2'-O-methyltransferase [Chlorobaculum parvum NCIB
8327]
Length = 221
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 105/188 (55%), Gaps = 2/188 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER ++ +++ R + LV++ ++ N++A RS DA+G+ VH +S SS R ++
Sbjct: 5 ERFQKIHQLLERRQTDLTLVMDNVNKPHNLAAIIRSCDAVGIHQVHAISRRSSIRTKQ-- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H + GA +W+ + L D+ +R G +I DA+ +D++ PTAIV+G E
Sbjct: 63 HTAAGASRWVKVGLSDSIVPVGEKIREAGMQILVATYRPDAVDFRSIDYTRPTAIVMGEE 122
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G S+EA++L+D IPM GMV+S NVSVAA +++ A R + + + E
Sbjct: 123 LTGPSEEAMNLADHFVYIPMFGMVESLNVSVAAALILFEAQRQRKAADLYDSRHFSDAEF 182
Query: 325 QILLAEFS 332
+ LL E++
Sbjct: 183 ERLLFEYA 190
>gi|343506853|ref|ZP_08744315.1| tRNA guanosine-2'-O-methyltransferase [Vibrio ichthyoenteri ATCC
700023]
gi|342801201|gb|EGU36679.1| tRNA guanosine-2'-O-methyltransferase [Vibrio ichthyoenteri ATCC
700023]
Length = 227
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + +E + NVSA R+ADA G+ +H V + R
Sbjct: 4 ERYNRIQQVLKARQTDLTFCLEEVHKPNNVSAVIRTADATGIHKIHAVW---PAKMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ + E + L+++G +I T++ A+ ++D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHSSIDEAISELKAQGMQILVTNLSDSAVDFREIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S A L+D IPM GMV S NVSVA+ ++M+ A R
Sbjct: 121 KVGASARAKELADQDIIIPMMGMVQSLNVSVASAVIMYEAQRQR 164
>gi|336247783|ref|YP_004591493.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter aerogenes KCTC
2190]
gi|444354107|ref|YP_007390251.1| tRNA (Guanosine18-2'-O-)-methyltransferase (EC 2.1.1.34)
[Enterobacter aerogenes EA1509E]
gi|334733839|gb|AEG96214.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter aerogenes KCTC
2190]
gi|443904937|emb|CCG32711.1| tRNA (Guanosine18-2'-O-)-methyltransferase (EC 2.1.1.34)
[Enterobacter aerogenes EA1509E]
Length = 229
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAIGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + + L+ RG +I TH+ AI ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVSHLKGRGMQILATHLSDKAIDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALALADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSMLPPE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|170766883|ref|ZP_02901336.1| tRNA guanosine-2'-O-methyltransferase [Escherichia albertii
TW07627]
gi|170124321|gb|EDS93252.1| tRNA guanosine-2'-O-methyltransferase [Escherichia albertii
TW07627]
Length = 229
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ +A+ ++D++CPT I++G E
Sbjct: 62 STAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDNAVDFREIDYTCPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L
Sbjct: 122 KTGITKEALELADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEA 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|376298146|ref|YP_005169376.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
ND132]
gi|323460708|gb|EGB16573.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
ND132]
Length = 196
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 5/199 (2%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
+S + E RK R V+ R + LV++ + D NVSA RS DA GV VH+ DS
Sbjct: 1 MSKQITEARKRRIDAVLARRQKDLTLVMDNIWDPHNVSAVLRSCDAFGVAGVHLYYTDS- 59
Query: 198 KRYRENRHVSMG-AEKWLD-IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC 255
++ + S G A KW++ E DA E L+ RG R+ T A V D D++
Sbjct: 60 -QWPDLALKSSGSATKWVERTEHVDAA-EMVAELKGRGMRVLRTGFSDSARPVMDFDFTK 117
Query: 256 PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC 315
PTAI++ NE+RG S + +L IPM+GMV SFNVSVAA I+++ A R +
Sbjct: 118 PTAIILSNEHRGTSPDLAALVPDEIYIPMQGMVQSFNVSVAAAIILYQAFTQRDAAGMYD 177
Query: 316 NGDLTSEEKQILLAEFSLR 334
+ EE + L ++ +R
Sbjct: 178 EPSFSREELESLKPQWYMR 196
>gi|283787717|ref|YP_003367582.1| tRNA (guanosine-2'-O)-methyltransferase [Citrobacter rodentium
ICC168]
gi|282951171|emb|CBG90863.1| tRNA (guanosine-2'-O)-methyltransferase [Citrobacter rodentium
ICC168]
Length = 229
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 11/209 (5%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E+R ER ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 3 EQRYERICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTM 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+ ++ + + L+ RG ++ TH+ +A+ ++D++ PT I++G
Sbjct: 61 ASAAAGSNSWVQVKTHRTIGDAVSHLKGRGMQVLATHLSDNAVDFREIDYTRPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTS 321
E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L
Sbjct: 121 EKTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE 180
Query: 322 EEKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 181 AEQQRLLFE-------GGYPVLAKVAKRK 202
>gi|397163156|ref|ZP_10486621.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter radicincitans
DSM 16656]
gi|396095303|gb|EJI92848.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter radicincitans
DSM 16656]
Length = 229
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 QRYARIREMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PSNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + VL++RG ++ TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRTIGDAVGVLKARGMQVLATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRENSMLPDE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|117621457|ref|YP_854563.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562864|gb|ABK39812.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 253
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R +++ R + + +E + N++A R+ADA+G+ VH V + R+
Sbjct: 14 ERFKRITDMLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKG- 72
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G++ W+D++L L++ G +I TH+ ++ +D++ PTAI+VG E
Sbjct: 73 -TARGSQNWVDVKLHPDIGSAVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQE 131
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC 315
G+ +EAL+L+D IPM GMV S NVSVAA +++ A R L GC
Sbjct: 132 KHGIGEEALALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGC 180
>gi|378981324|ref|YP_005229465.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|419974046|ref|ZP_14489467.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419979551|ref|ZP_14494842.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987227|ref|ZP_14502350.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419993378|ref|ZP_14508320.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997074|ref|ZP_14511873.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420004746|ref|ZP_14519379.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010899|ref|ZP_14525365.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420014971|ref|ZP_14529274.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022437|ref|ZP_14536605.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420027690|ref|ZP_14541680.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420033974|ref|ZP_14547770.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420039084|ref|ZP_14552723.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420044958|ref|ZP_14558432.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420051007|ref|ZP_14564300.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420056566|ref|ZP_14569721.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420062237|ref|ZP_14575213.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420066237|ref|ZP_14579038.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420074490|ref|ZP_14587095.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420076584|ref|ZP_14589054.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420083499|ref|ZP_14595779.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421910567|ref|ZP_16340346.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421918463|ref|ZP_16347990.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|428149354|ref|ZP_18997172.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428938115|ref|ZP_19011247.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae VA360]
gi|364520735|gb|AEW63863.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397345432|gb|EJJ38556.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397346628|gb|EJJ39741.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397349053|gb|EJJ42150.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397358646|gb|EJJ51361.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397363938|gb|EJJ56574.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397364411|gb|EJJ57042.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397377019|gb|EJJ69260.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397377526|gb|EJJ69757.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397384543|gb|EJJ76661.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397393016|gb|EJJ84789.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397393674|gb|EJJ85425.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403497|gb|EJJ95059.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397410161|gb|EJK01452.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397410652|gb|EJK01926.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397420514|gb|EJK11584.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397428608|gb|EJK19343.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397429999|gb|EJK20700.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397435209|gb|EJK25832.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397446914|gb|EJK37118.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397451116|gb|EJK41206.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|410115529|emb|CCM82971.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410119216|emb|CCM90615.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426306305|gb|EKV68410.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae VA360]
gi|427540682|emb|CCM93310.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 229
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 KRYERICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAVW--PSSRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + + L+ +G +I TH+ AI ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIADAVSHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSMLPPQ 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|307719082|ref|YP_003874614.1| hypothetical protein STHERM_c14010 [Spirochaeta thermophila DSM
6192]
gi|306532807|gb|ADN02341.1| hypothetical protein STHERM_c14010 [Spirochaeta thermophila DSM
6192]
Length = 249
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
LS ++ R R VVK R+ V + +E + N +A RSA+A+G+Q VH+V + +
Sbjct: 16 LSRWVTPRRFRRMQEVVKERTRYVTVALENIYHPHNANAVLRSAEAMGLQDVHIV--EDA 73
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS--- 254
+ ++ VSMG +WL + + PR + LR GYRI T V + D +
Sbjct: 74 VPFTPSKGVSMGTARWLSLHRYRDPRMAVSRLREEGYRIIATTPHRTPTPVDEFDVTRGK 133
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
C A G E G+SD L +D +IPM G V+S N+SV AGI++H+ V + R
Sbjct: 134 C--AFFFGGELPGLSDAVLEAADEYLTIPMYGFVESLNISVTAGIVLHNVV--QRLRKTD 189
Query: 315 CNGDLTSEEKQILL 328
LTS E++ LL
Sbjct: 190 IPWKLTSSEQEALL 203
>gi|414072702|ref|ZP_11408629.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
gi|410804863|gb|EKS10901.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
Length = 228
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + +E + N+SA RSADA+G VH V + K
Sbjct: 1 MQQTRYQRIEDVLSRRQTDLTVCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPEKQKWLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ WL+ L + +R R +I TH+ A+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWLETHLHRNIDDAVTAMRERNPEIQILATHLSEGAVDFREVDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC-NGD 318
+VG E G+S++AL +D IPM+GMV S NVSVAA +++ A R L G N D
Sbjct: 119 IVGQEKTGISEKALEYADQNIIIPMQGMVQSLNVSVAAALILFEA--QRQRELAGLYNRD 176
Query: 319 LTSEE 323
+ S E
Sbjct: 177 MLSAE 181
>gi|88861117|ref|ZP_01135751.1| putative tRNA methyltransferase (tRNA mG18-2'-O-methyltransferase)
[Pseudoalteromonas tunicata D2]
gi|88816839|gb|EAR26660.1| putative tRNA methyltransferase (tRNA mG18-2'-O-methyltransferase)
[Pseudoalteromonas tunicata D2]
Length = 229
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R ++ V+ R + L ++ + N+SA RSADA+G+ +H V + KR +
Sbjct: 5 RYQKIKAVLDKRQIDLTLCLDEVHKHHNLSAIVRSADAVGIHHIHSVWPEGGKRLTSS-- 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSR--GYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S G++ W + + + +RSR +I TH A+ +D++ PTAI++G
Sbjct: 63 TSGGSKNWTENHIHHTVEDAIATIRSRTPNVQILATHFSEQAVDFRAIDYTRPTAIILGQ 122
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEE 323
E G+SD+AL+L+D IPM GMV S NVSVAA I+++ A R + G+L
Sbjct: 123 EKFGISDQALALADQHIIIPMVGMVQSLNVSVAAAIILYEAQKQRQDAGLYQQGNLPDSI 182
Query: 324 KQILLAE 330
K LL E
Sbjct: 183 KHRLLFE 189
>gi|378765082|ref|YP_005193541.1| tRNA guanosine-2'-O-methyltransferase [Pantoea ananatis LMG 5342]
gi|386017720|ref|YP_005936019.1| tRNA guanosine-2'-O-methyltransferase TrmH [Pantoea ananatis
AJ13355]
gi|386077345|ref|YP_005990870.1| tRNA guanosine-2'-O-methyltransferase TrmH [Pantoea ananatis PA13]
gi|327395801|dbj|BAK13223.1| tRNA guanosine-2'-O-methyltransferase TrmH [Pantoea ananatis
AJ13355]
gi|354986526|gb|AER30650.1| tRNA guanosine-2'-O-methyltransferase TrmH [Pantoea ananatis PA13]
gi|365184554|emb|CCF07504.1| tRNA guanosine-2'-O-methyltransferase [Pantoea ananatis LMG 5342]
Length = 233
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + + +E + NVSA R+ADA+G+ VH V S+R R
Sbjct: 4 QRFARIQEMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSQRMRTQA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S G+ W+++ + + + L+++ +I T++ DA+ ++D++ PT I++G E
Sbjct: 62 SASAGSNSWVNVVTHRSINDAISHLKTQNMQILATNLSADAVDFREIDYTKPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++DEAL+L+D IPM GMV S NVSVA+ ++++ A R A L E
Sbjct: 122 KTGITDEALALADRHIIIPMVGMVQSLNVSVASALILYEAQRQRQNAGMYQRQASLLAPE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|152972505|ref|YP_001337651.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238897101|ref|YP_002921847.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262045611|ref|ZP_06018630.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329996955|ref|ZP_08302652.1| RNA methyltransferase, TrmH family [Klebsiella sp. MS 92-3]
gi|365141033|ref|ZP_09346924.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella sp. 4_1_44FAA]
gi|386037140|ref|YP_005957053.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae KCTC
2242]
gi|402778410|ref|YP_006633956.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|424832971|ref|ZP_18257699.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424931189|ref|ZP_18349561.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425083772|ref|ZP_18486869.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425093885|ref|ZP_18496969.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428932116|ref|ZP_19005700.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae JHCK1]
gi|449048163|ref|ZP_21731133.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae hvKP1]
gi|150957354|gb|ABR79384.1| putative tRNA/rRNA methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549429|dbj|BAH65780.1| putative tRNA/rRNA methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259037037|gb|EEW38289.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328539245|gb|EGF65274.1| RNA methyltransferase, TrmH family [Klebsiella sp. MS 92-3]
gi|339764268|gb|AEK00489.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae KCTC
2242]
gi|363653085|gb|EHL92075.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella sp. 4_1_44FAA]
gi|402539382|gb|AFQ63531.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|405598264|gb|EKB71493.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405610381|gb|EKB83185.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407805376|gb|EKF76627.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414710417|emb|CCN32121.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426307383|gb|EKV69465.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae JHCK1]
gi|448877130|gb|EMB12100.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae hvKP1]
Length = 229
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 KRYERICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAVW--PSSRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ +G +I TH+ AI ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIADAVGHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSMLPPQ 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|157373473|ref|YP_001472073.1| tRNA guanosine-2'-O-methyltransferase [Shewanella sediminis
HAW-EB3]
gi|157315847|gb|ABV34945.1| tRNA guanosine-2'-O-methyltransferase [Shewanella sediminis
HAW-EB3]
Length = 231
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 10/214 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ NR + L ++ + N++A R+ADA+G+ VH + D R N
Sbjct: 4 ERFARINEMLDNRQPDLTLCLDKVHKTNNIAAVIRTADAVGIHQVHAIWPDLDMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ D E R++G +I T+ DA+ ++D++ PTAI++GNE
Sbjct: 63 -TASGSQQWVKTIRHDHMDEAQTQFRAQGMQILATNFSEDAVDFREIDYTRPTAIILGNE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
GVS E ++ +D IPM GMV S NVSVA+ ++M+ A R G G +E
Sbjct: 122 RDGVSPEGIAAADQHIIIPMIGMVQSLNVSVASALIMYEA--QRQREAAGMYGQRRLDED 179
Query: 325 QILLAEFSLRHSKSAISIVHEYAKRKETTHMPKL 358
+ F H ++ A R+++ PK+
Sbjct: 180 YCQVKLFEQGHP------IYAKACRRKSIPYPKV 207
>gi|392557337|ref|ZP_10304474.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas undina
NCIMB 2128]
Length = 228
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + +E + N+SA R+ADA+G VH V + K
Sbjct: 1 MQQTRYQRIESVLSRRQTDLTVCLEDVHKHHNLSAIVRTADAVGCHHVHAVWPEKQKWLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ WLD L + +R+ +I TH+ DA+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWLDTHLHRNIDDAVASMRAHNPDVQILATHLSEDAVDFREIDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC-NGD 318
+VG E G+S +AL +D IPM+GMV S NVSVAA +++ A R L G N +
Sbjct: 119 IVGQEKTGISPQALEYADQNIIIPMQGMVQSLNVSVAAALILFEA--QRQRDLAGLYNRN 176
Query: 319 LTSEE 323
+ SEE
Sbjct: 177 MLSEE 181
>gi|197286694|ref|YP_002152566.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis HI4320]
gi|227355114|ref|ZP_03839525.1| tRNA (guanosine-2'-O-)-methyltransferase [Proteus mirabilis ATCC
29906]
gi|425069568|ref|ZP_18472683.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW6]
gi|425071027|ref|ZP_18474133.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW4]
gi|194684181|emb|CAR45642.1| tRNA (guanosine-2'-O-)-methyltransferase [Proteus mirabilis HI4320]
gi|227164901|gb|EEI49748.1| tRNA (guanosine-2'-O-)-methyltransferase [Proteus mirabilis ATCC
29906]
gi|404596994|gb|EKA97501.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW6]
gi|404599852|gb|EKB00305.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW4]
Length = 239
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NV+A R+ADA+G+ +H + + R +
Sbjct: 5 RYARICQMMAMRQPDLTVCLEEVHKSHNVAAVIRTADAVGIPKIHAIWPEEKMRMLVSP- 63
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+++ + N R++G ++ TH+ A+ ++D++ PT I++G E
Sbjct: 64 -AAGSNSWVNVNTHPTIADAINTFRAQGMQVLATHLSDKAVDFREIDYTQPTCIIMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG----CNGDLTS 321
G+S EA++L+D +PM GMV S NVSVA+ ++++ A R + G LT+
Sbjct: 123 TGISPEAIALADQDIIVPMMGMVQSLNVSVASALILYEA--QRQRQAAGMYNRTESALTA 180
Query: 322 EEKQILLAE 330
EE+QILL E
Sbjct: 181 EEQQILLFE 189
>gi|422020171|ref|ZP_16366711.1| tRNA guanosine-2'-O-methyltransferase [Providencia alcalifaciens
Dmel2]
gi|414101766|gb|EKT63363.1| tRNA guanosine-2'-O-methyltransferase [Providencia alcalifaciens
Dmel2]
Length = 237
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E R R ++ R + L +E + NVSA RSADA+G+ ++H V D + +
Sbjct: 3 ERRYRRICQMMAMRQPDLTLCLEEIHKPHNVSAIVRSADAVGIHNIHAVWPDQHVKLSVS 62
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+ + + + ++S+G +I T++ A+ ++D++ PT I+VG
Sbjct: 63 S--AAGSNSWVKVIPHQSTENAISQIKSQGMQILVTNLSDSAVDFREIDYTQPTCIMVGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDL 319
E G+SD+AL+L+D IPM GMV S NVSVA+ ++++ A R +L G N L
Sbjct: 121 EKTGISDKALALADQHIIIPMVGMVQSLNVSVASALILYEA--QRQRQLAGMYDRENSLL 178
Query: 320 TSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
+ +E+Q L E ++ E AKRK
Sbjct: 179 SEQEQQEWLFE-------GGYPVLAEVAKRK 202
>gi|315127927|ref|YP_004069930.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas sp.
SM9913]
gi|315016441|gb|ADT69779.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas sp.
SM9913]
Length = 228
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + +E + N+SA R+ADA+G VH V + K
Sbjct: 1 MQKTRYQRIESVLSRRQTDLTVCLEDVHKHHNLSAIVRTADAVGCHHVHAVWPEKQKWLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ WLD L + +R+ +I TH+ DA+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWLDTHLHKNIDDAAASIRAHNPDVQILATHLSEDAVDFREIDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC-NGD 318
+VG E G+S++AL +D IPM+GMV S NVSVAA +++ A R L G N +
Sbjct: 119 IVGQEKTGISEKALEYADQNIIIPMQGMVQSLNVSVAAALILFEA--QRQRELAGLYNRN 176
Query: 319 LTSEE 323
+ SE+
Sbjct: 177 MLSEQ 181
>gi|425074280|ref|ZP_18477383.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425084916|ref|ZP_18488009.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405595745|gb|EKB69115.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405608331|gb|EKB81282.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 229
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 KRYERICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAVW--PSSRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ +G +I TH+ AI ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIADTVGHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSMLPPQ 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|85818933|gb|EAQ40092.1| SpoU rRNA methylase family protein [Dokdonia donghaensis MED134]
Length = 218
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L +L E R + F V+ R+ + VE + N SA RS ++ GVQ +HV+ ++
Sbjct: 9 LQSFLTERRVQLFDKVLSERTTHFTVAVEDVYQLHNTSAVIRSCESFGVQELHVIEEVNA 68
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
KR +R ++MGA+KW+D+ ++ C LR +GY+I T DA + + D +
Sbjct: 69 KRI--DREIAMGAQKWVDVARHNSASSCIKSLREQGYKIVATSPHKDAHRLEEFDVTEKA 126
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
AI G E G+S+ + +D IPM G +S N+SV+A I + +
Sbjct: 127 AIFFGRETEGLSELVMEEADDFIYIPMVGFTESLNISVSAAITLQY 172
>gi|72383592|ref|YP_292947.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus str.
NATL2A]
gi|72003442|gb|AAZ59244.1| tRNA (guanosine-2'-O-)-methyltransferase [Prochlorococcus marinus
str. NATL2A]
Length = 229
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+ R + +++E + N+SA RS DA+GV + + + +++
Sbjct: 3 LLPRRFERIKSVLNRRISDLTVLIENVEKPHNLSAIIRSCDAVGVLEAYAIF--NKEKFL 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ I + E VL+ +G+++ T++ +I D+ PTA V+
Sbjct: 61 TFNSTAQGSQKWVKINQYKKTTEAIKVLKEKGFKLYGTNLNPRSIDYRKCDFKGPTAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGDLT 320
G E G+S+EA SL D IPM+GMV+S NVSVAA L+ A+ R +V +G+
Sbjct: 121 GAEKWGISEEASSLMDEHIHIPMRGMVESLNVSVAASALLFEALRQRQVANMVPESGEGM 180
Query: 321 SEE 323
S+E
Sbjct: 181 SQE 183
>gi|427418424|ref|ZP_18908607.1| rRNA methylase [Leptolyngbya sp. PCC 7375]
gi|425761137|gb|EKV01990.1| rRNA methylase [Leptolyngbya sp. PCC 7375]
Length = 234
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 8/202 (3%)
Query: 130 SSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSV 189
++ E++ L +L EER+ + V+ R+ V + +E L N A R+ D G+Q V
Sbjct: 12 TTEELINYLGKFLTEERRAKIETVLAYRTRYVTVALEDLHTSQNAGAVLRNCDHFGIQDV 71
Query: 190 HVVSCDSSKRYRENRHVSMGAEKWLDIELW----DAPRECFNVLRSRGYRIATTHVGMDA 245
H++ + + ++ N +V+ G +KWL + D R C L+++GY I T +A
Sbjct: 72 HII--EQTTSFKVNLNVTRGCQKWLTTHRYAKQRDNTRNCIATLKAKGYCIVATTPHTEA 129
Query: 246 ISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
+ + + A++ GNE G+S+ A++ +D IPM G +SFN+SV+A + + ++
Sbjct: 130 LELSALPTERSIALLFGNELDGLSEIAMAEADRLLKIPMYGFSESFNISVSAALCL-QSI 188
Query: 306 CDRATRLVGCNGDLTSEEKQIL 327
CDR R LT EKQ L
Sbjct: 189 CDR-IRHSTHPWQLTPAEKQTL 209
>gi|119773403|ref|YP_926143.1| tRNA guanosine-2'-O-methyltransferase [Shewanella amazonensis SB2B]
gi|119765903|gb|ABL98473.1| tRNA guanosine-2'-O-methyltransferase [Shewanella amazonensis SB2B]
Length = 241
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 4/174 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ NR + ++++ + N++A RSADA+GV +H V +S+ R N
Sbjct: 4 ERFARINEMLDNRQPDLTVLLDQVHKTNNIAAVLRSADAVGVHQLHAVWPESAMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ + L++ G ++ T+ +A ++D++ PTAIV+G+E
Sbjct: 63 -TASGSQQWVKTLRHQTVTDAITALKADGMQVVVTNFSPNAKDFREIDYTKPTAIVLGHE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGD 318
GVSDEA+ L+D IPM GMV S NVSVA +++ A +R R G G+
Sbjct: 122 KNGVSDEAVRLADAEVIIPMVGMVQSLNVSVAGALVLFEA--ERQRRATGMYGN 173
>gi|113953546|ref|YP_729908.1| tRNA/rRNA methyltransferase [Synechococcus sp. CC9311]
gi|113880897|gb|ABI45855.1| tRNA/rRNA methyltransferase [Synechococcus sp. CC9311]
Length = 229
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R ER V+ R ++ ++VE + N+SA RS DA+GV H VS S R R
Sbjct: 3 ILPRRFERLRAVLNQRMANLTVLVEHVDKPHNLSAILRSCDAVGVLEAHAVSL--SGRSR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+++W+ + E L+ RG+ + T++ +DA+ D D++ PTA V+
Sbjct: 61 TYNSTAQGSQRWVPLHSHPNIEEAVKTLKDRGFHLYGTNLSVDALDYRDCDFTGPTAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD 318
G E G+S+ A L D IPM+GMV S NVSVA L+ A+ R A L +G+
Sbjct: 121 GAEKWGLSENATKLMDTDVFIPMRGMVQSLNVSVATATLLFEALRQREAAGLAPSDGE 178
>gi|242280259|ref|YP_002992388.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio salexigens DSM
2638]
gi|242123153|gb|ACS80849.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio salexigens DSM
2638]
Length = 196
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R+ R +V+ R L+++ + D NVSA RS DA G+ +H+ S+ +
Sbjct: 8 QREARVRDVLAKRQKDFTLIIDNVWDPHNVSAILRSCDAFGIYGIHLYYT-VSQWPELAK 66
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S +KW++ P + LR +GY++ T A + D D S P+A+++ NE
Sbjct: 67 KSSASGKKWVERTKHTDPVKMVGGLRDQGYQVLRTGFSETARPLMDFDLSKPSAVILSNE 126
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
+ G + E L IPM+GM+ SFNVSVAA ++++H R + + N T EE
Sbjct: 127 HSGTAPELAELVPDEVYIPMQGMIQSFNVSVAAALILYHGFSQRFAKGMYDNPSFTPEEM 186
Query: 325 QILLAEFSLR 334
+ L AE+ R
Sbjct: 187 EKLTAEWLAR 196
>gi|172037390|ref|YP_001803891.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Cyanothece sp.
ATCC 51142]
gi|354553728|ref|ZP_08973034.1| tRNA guanosine-2'-O-methyltransferase [Cyanothece sp. ATCC 51472]
gi|171698844|gb|ACB51825.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Cyanothece sp.
ATCC 51142]
gi|353554445|gb|EHC23835.1| tRNA guanosine-2'-O-methyltransferase [Cyanothece sp. ATCC 51472]
Length = 219
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R R V++ R + ++ E + N+SA R+ DA+G+ VH S +++ +
Sbjct: 3 LLPRRYHRIKEVLEKRQPDLTVLTEDVHKPHNLSAIIRTCDAVGILDVH--SINTTDEFP 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
VS G++KW+ + + N L+S+ ++I H+ ++ D+D++ PTA+++
Sbjct: 61 TFSQVSQGSDKWIFLHTHPNIQTAINHLKSKKFKIYAAHLTDKSVDYRDIDYTQPTALLL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
G E GVS+EA SL D IPM GMV S NVSVAA +++ A R + + L
Sbjct: 121 GAEKWGVSEEAASLVDGHIIIPMLGMVQSLNVSVAAAVILFEAQRQRLQKKMYDTSRLDI 180
Query: 322 EEKQILLAEFS 332
+ +L E+S
Sbjct: 181 KRYHQILFEWS 191
>gi|359450267|ref|ZP_09239726.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20480]
gi|358043913|dbj|GAA75975.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20480]
Length = 228
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + +E + N+SA RSADA+G VH V ++ K
Sbjct: 1 MQQNRYQRIKDVLSRRQTDLTVCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPENQKWLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ WL+ L + ++R +I TH+ DA+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWLETHLHKNIDDAATMMRQHNPNIQILATHLSEDAVDFREIDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+VG E G+S +AL +D IPM+GMV S NVSVAA +++ A R
Sbjct: 119 IVGQEKTGISAQALKHADQNIIIPMQGMVQSLNVSVAAALILFEAQHQR 167
>gi|436841644|ref|YP_007326022.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170550|emb|CCO23921.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 196
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 3/191 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRE-N 203
+R+ R V+ R L+++ + D NVSA RS DA GV +H+ S ++ E
Sbjct: 8 QREARVREVLAKRQKDFTLIIDNVWDPHNVSAILRSCDAFGVYGIHLYYTVS--QWPELA 65
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ S +KW++ P + + LR +GY++ T A + D D S P+A+++ N
Sbjct: 66 KKSSASGKKWVERTKHSDPVKMISGLRDQGYQVLRTGFSETARPLMDFDLSTPSAVILSN 125
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEE 323
E+ G + E L IPM+GM+ SFNVSVAA ++++H R + + + T EE
Sbjct: 126 EHSGTAPELAELVPDEVYIPMQGMIQSFNVSVAAALILYHGFSQRYAKGMYNDPSFTPEE 185
Query: 324 KQILLAEFSLR 334
+ L AE+ R
Sbjct: 186 LEKLTAEWLAR 196
>gi|119472959|ref|ZP_01614815.1| tRNA (Guanosine-2'-O-)-methyltransferase [Alteromonadales bacterium
TW-7]
gi|392540167|ref|ZP_10287304.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas marina
mano4]
gi|119444628|gb|EAW25938.1| tRNA (Guanosine-2'-O-)-methyltransferase [Alteromonadales bacterium
TW-7]
Length = 228
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + +E + N+SA RSADA+G VH V ++ K
Sbjct: 1 MQQNRYQRIKDVLSRRQTDLTVCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPENQKWLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ WL+ L + ++R +I TH+ DA+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWLETHLHKNIDDAATMMRQHNPNVQILATHLSEDAVDFREIDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+VG E G+S +AL +D IPM+GMV S NVSVAA +++ A R
Sbjct: 119 IVGQEKTGISAQALKHADQNIIIPMQGMVQSLNVSVAAALILFEAQHQR 167
>gi|242241345|ref|YP_002989526.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech703]
gi|242133402|gb|ACS87704.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech703]
Length = 230
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R +++ NR + + +E + NVSA R+ADA+GV VH V + R +
Sbjct: 1 MTPQRYARIRDMLNNRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHQVHAVW--PTNRMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ + + + L+S+G ++ T++ A+ D+D++ PT I++
Sbjct: 59 TLVSTAAGSNSWVQVKTHRSIHDAVSHLKSQGMQVLATNLSASAVDFRDVDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCN----G 317
G E G+S EAL+L+D IPM GMV S NVSVA+ ++++ A R +L G
Sbjct: 119 GQEKTGISAEALALADQDIIIPMIGMVQSLNVSVASALILYEA--QRQRQLAGMYQREIS 176
Query: 318 DLTSEEKQILLAE 330
L EE+Q LL E
Sbjct: 177 PLDEEEQQRLLFE 189
>gi|119484369|ref|ZP_01618986.1| spoU protein [Lyngbya sp. PCC 8106]
gi|119457843|gb|EAW38966.1| spoU protein [Lyngbya sp. PCC 8106]
Length = 229
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 111/211 (52%), Gaps = 8/211 (3%)
Query: 130 SSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSV 189
S +++ LS ++ E R ++ VV+ R+ + +++E + N SA R+ D+ GVQ V
Sbjct: 5 SKKDLITHLSQFVTETRSQKIEAVVQQRTRQLTVILEDIYQPHNASACLRNCDSFGVQDV 64
Query: 190 HVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRE-----CFNVLRSRGYRIATTHVGMD 244
H++ ++ + NR VS+G+ +WL I ++ P+ C L+S+GY+I T +
Sbjct: 65 HII--ENRNDFDLNREVSLGSHRWLTISRYNEPKINNTKICLEKLKSQGYKIVATTPHEE 122
Query: 245 AISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
I++ + ++ G E G+SD+A+S +D IPM G +SFN+SV+ + ++
Sbjct: 123 EITIEQISVEEKLGLMFGTELNGLSDDAVSQADYLVRIPMVGFSESFNISVSVALCLYEI 182
Query: 305 VCD-RATRLVGCNGDLTSEEKQILLAEFSLR 334
RA+ L +L E Q+ S+R
Sbjct: 183 TTKLRASNLDWKLSELEQAEIQLQWLRQSIR 213
>gi|410087544|ref|ZP_11284247.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Morganella morganii
SC01]
gi|409765988|gb|EKN50086.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Morganella morganii
SC01]
Length = 231
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + L +E + NVSA RSADA+G+ +H V + K +
Sbjct: 4 QRYERICRMMAMRQPDLTLCLEEVHKPHNVSAVIRSADAVGIHDLHAVWPEKIKTLVSS- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+++ D + +L+S+G +I TH+ A+ +D++ PT I++G+E
Sbjct: 63 --AAGSNSWVNVHNHDTLADAVTLLKSQGMQILATHLSDSAVDFRAIDFTRPTCIIMGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
G+S EA+ L+D IPM GMV S NVSVAA ++++ A
Sbjct: 121 KTGISQEAIRLADQHIMIPMSGMVQSLNVSVAAAVILYEA 160
>gi|332662188|ref|YP_004444976.1| tRNA/rRNA methyltransferase SpoU [Haliscomenobacter hydrossis DSM
1100]
gi|332331002|gb|AEE48103.1| tRNA/rRNA methyltransferase (SpoU) [Haliscomenobacter hydrossis DSM
1100]
Length = 209
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD---SSKRYRE 202
R+++ + +NR + + +++E + D NV A RS D++G++ + V+ + +
Sbjct: 5 REQKIRQLAQNRQFDLTVILENVDDPHNVGAVLRSCDSVGIREIFVLYTRPGLQNHKLEL 64
Query: 203 NRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVG 262
+ S G+ KW+D+ L+ C +R R+ TH+ DA S+Y++D + A++ G
Sbjct: 65 GKRTSAGSRKWIDVYLYREVDACMEHVRRNYQRVYATHLAHDAKSLYELDLAQSAALMFG 124
Query: 263 NENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR-LVGCNGDLTS 321
NE G+S+ ALS +D IP GM S NVSVA + ++ A R+ + L G ++
Sbjct: 125 NEADGLSELALSQADGNFIIPQVGMAQSLNVSVACAVSLYEAFRQRSAKGLYGVGNPAST 184
Query: 322 EEKQILLAEFSLRH 335
+++ LL ++ R
Sbjct: 185 DQQAALLEDYFRRQ 198
>gi|307128795|ref|YP_003880811.1| tRNA (Guanosine-2'-O-)-methyltransferase [Dickeya dadantii 3937]
gi|306526324|gb|ADM96254.1| tRNA (Guanosine-2'-O-)-methyltransferase [Dickeya dadantii 3937]
Length = 230
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 10/194 (5%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R ++ NR + + +E + NVSA R+ADA+GV VH V + R R
Sbjct: 1 MTPERYTRIREMLNNRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHQVHAVW--PTNRMR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ +E ++ L+++G +I T++ A+ ++D++ PT I++
Sbjct: 59 TLVSTAAGSNSWVQVETHRTVQDAVGHLKTQGMQILATNLSASAVDFREVDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG-----CN 316
G E G++ +AL+L+D IPM GMV S NVSVA+ ++++ A R +L G C+
Sbjct: 119 GQEKTGITADALALADQDIIIPMVGMVQSLNVSVASALILYEA--QRQRQLAGMYQRECS 176
Query: 317 GDLTSEEKQILLAE 330
L EE+Q LL E
Sbjct: 177 -PLDEEEQQRLLFE 189
>gi|334126221|ref|ZP_08500200.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter hormaechei ATCC
49162]
gi|333385881|gb|EGK57107.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter hormaechei ATCC
49162]
Length = 229
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + + +E + NVSA R+ADA+GV VH V + R R
Sbjct: 4 KRYERICEMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGT--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E + L+ RG ++ TH+ A+ ++D++ PT I++G E
Sbjct: 62 STAAGSNSWVSVKTHQTIGEAVSHLKGRGMQVLATHLSEKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYERSNSMLPED 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|429088728|ref|ZP_19151460.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter universalis
NCTC 9529]
gi|426508531|emb|CCK16572.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter universalis
NCTC 9529]
Length = 229
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L++RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRNIGDAVGHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITEEALRLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSTLPEE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|401761640|ref|YP_006576647.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400173174|gb|AFP68023.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 229
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V + R R
Sbjct: 4 QRYTRICEMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGT--RMRNMV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E + L+ RG ++ TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVSVKTHQTIGEAVSHLKGRGMQVLATHLSAKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYERSNSMLPEE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|254478160|ref|ZP_05091542.1| RNA methyltransferase, TrmH family [Carboxydibrachium pacificum DSM
12653]
gi|214035889|gb|EEB76581.1| RNA methyltransferase, TrmH family [Carboxydibrachium pacificum DSM
12653]
Length = 198
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
+RF V++ R + V+ +++ N SA R+ DA+GV V+ S ++ K N VS
Sbjct: 2 KRFYEVLQKRQKDFVVFVDDVTNEHNFSAILRTCDAVGVMRVYYFS-EAKKGIEINEAVS 60
Query: 208 MGAEKWLDIE-LWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENR 266
M A +WL IE ++D + + ++ T + + ++D++ PT +VVGNE +
Sbjct: 61 MAANRWLFIERVYDREKAIKELKERENLQVVVTWLDESSKDFREIDYTKPTLLVVGNELK 120
Query: 267 GVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQI 326
GVS++ L+L+D R IPM GMV S NVSVA GI+++ A+ R + + L+ +E +
Sbjct: 121 GVSEDILNLADERIVIPMMGMVQSLNVSVATGIILYEALRQRLDKGMYLKPTLSEKEIEE 180
Query: 327 LLAEFS 332
++ +++
Sbjct: 181 IIMKWN 186
>gi|311277429|ref|YP_003939660.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae SCF1]
gi|308746624|gb|ADO46376.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae SCF1]
Length = 229
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARIREMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 STAAGSNSWVSVKTHRTIGDAVAQLKGRGMQILATHLSDSAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 122 KTGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSTLPQE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|124025191|ref|YP_001014307.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
NATL1A]
gi|123960259|gb|ABM75042.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
NATL1A]
Length = 229
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+ R + +++E + N+SA RS DA+GV + + + +++
Sbjct: 3 LLPRRFERLKSVLNRRISDLTVLIENVEKPHNLSAIIRSCDAVGVLEAYAIF--NKEKFL 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ I + E VL+ +G+++ T++ +I ++ PTA V+
Sbjct: 61 TFNSTAQGSQKWVKINQYKMTTEAIKVLKEKGFKLYGTNLNPRSIDYRKCNFKGPTAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGDLT 320
G E G+S+EA SL D IPM+GMV+S NVSVAA L+ A+ R +V +G+
Sbjct: 121 GAEKWGISEEASSLMDEHIHIPMRGMVESLNVSVAASALLFEAIRQRQVANMVPESGEGM 180
Query: 321 SEE 323
S+E
Sbjct: 181 SQE 183
>gi|443326966|ref|ZP_21055603.1| rRNA methylase [Xenococcus sp. PCC 7305]
gi|442793395|gb|ELS02845.1| rRNA methylase [Xenococcus sp. PCC 7305]
Length = 215
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R ER V+ R + +V E + N+SA R+ DA+GV +VH V+ +S +
Sbjct: 1 MIPRRYERLKQVLSKRQPDLTVVTEDVHKPHNLSAIIRTCDAVGVFAVHGVNSNS--KVP 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
V+ G+EKW+ + + + L+ ++I H+ +AI D+D++ PTAI++
Sbjct: 59 TYSQVAQGSEKWVQLHTHNHIKTAIADLQDSNFKIYAAHLSPEAIDYRDIDYTLPTAILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E GVS+ A L D IPM GMV S NVSVAA +++ A R
Sbjct: 119 GAEKHGVSELAAELVDGHIIIPMMGMVQSLNVSVAAAVILFEAQRQR 165
>gi|119947098|ref|YP_944778.1| tRNA guanosine-2'-O-methyltransferase [Psychromonas ingrahamii 37]
gi|119865702|gb|ABM05179.1| tRNA guanosine-2'-O-methyltransferase [Psychromonas ingrahamii 37]
Length = 234
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 104/189 (55%), Gaps = 7/189 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R N++ R + + +E + N++A R+ADA+GV VH + + + N
Sbjct: 4 ERLARITNMLNYRQPDLTVFLEQVHKAHNLAAIVRTADAVGVSDVHATWENKTTQISGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G++ W+++ + + LR++G +I T++ AI ++D++ PTAI++G E
Sbjct: 63 -TATGSQNWVNLHSHETLEDAVKALRAQGMQIIATNLSDSAIDFREVDYTKPTAILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC-NGD--LTS 321
G+S EAL+L+D IPM GM S NVSVA+ ++++ A R L G NG+ L
Sbjct: 122 KHGISPEALALADQDVIIPMVGMCQSLNVSVASALILYEA--QRQRELAGMYNGECRLPE 179
Query: 322 EEKQILLAE 330
EE +L E
Sbjct: 180 EEAHRILFE 188
>gi|384135990|ref|YP_005518704.1| tRNA/rRNA methyltransferase SpoU [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290075|gb|AEJ44185.1| tRNA/rRNA methyltransferase (SpoU) [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 262
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ + +E + D N +A RSA+A GVQ HV + + ++ ++ V+ GA KWL +
Sbjct: 49 LAIALEAVDDGHNQAAILRSAEAFGVQ--HVAVIEGKQPFQPSKGVTQGAHKWLTLHRMP 106
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
++L +RG+++ T +G A + +D + PTAI+ GNE GVS EA +D R
Sbjct: 107 DIGRAIDLLHARGFQVYATDLGEGAQPLDAVDLARPTAILFGNEKDGVSAEARERADGRF 166
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAI 340
IPM G V SFNVSVAA I ++ + RA G L ++E+ L + LR A
Sbjct: 167 YIPMAGFVQSFNVSVAAAIALYE-LTRRAREAAGDRYALGADERHKLYVTWCLRSLHGA- 224
Query: 341 SIVHEYAKRK 350
E A+R+
Sbjct: 225 --TREEARRR 232
>gi|333895080|ref|YP_004468955.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas sp. SN2]
gi|332995098|gb|AEF05153.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas sp. SN2]
Length = 243
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 7/188 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R + + R + + +E + NVSA R+ DA+G+ VH V ++Y+
Sbjct: 4 ERYLRIRSALAKRQTDLTVCLENVHKPHNVSAVVRTCDAIGIHRVHTVW---EEKYQFRG 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+++W+ D+ L+ +G ++ TH+ A+ ++D++ PTAI+ G E
Sbjct: 61 DTAMGSQQWVRQTNHDSLGNAIGALKQQGMQVLVTHLSDTAVGFREVDYTKPTAIIFGQE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG--DLTSE 322
G +DEA++++D IPM GMV S NVSVAA ++++ A R L G L E
Sbjct: 121 RYGATDEAIAMADQDIIIPMAGMVQSLNVSVAAALVLYEA--QRQRELAGMYDVEHLPEE 178
Query: 323 EKQILLAE 330
E Q LL E
Sbjct: 179 ECQKLLFE 186
>gi|354721376|ref|ZP_09035591.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter mori LMG 25706]
Length = 229
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V D R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPDG--RMRNTV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E + L+ RG +I T++ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVSVKNHRTIGEAVSHLKGRGMQILATNLSAKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGISQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYERSNSMLPKE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|381403358|ref|ZP_09928042.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. Sc1]
gi|380736557|gb|EIB97620.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. Sc1]
Length = 232
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
++R R ++ R + + + +E + NVSA R+ADA+G+ VH V S+R R
Sbjct: 3 DQRFARIQAMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSQRMRTQ 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S G+ W+ + + L+ + ++ TH+ DA+ ++D++ PT I++G
Sbjct: 61 ASASAGSNSWVKVVTHPTIGDAVKQLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTS 321
E G+++EAL+L+D + IPM GMV S NVSVA ++++ A R A + L
Sbjct: 121 EKTGITEEALALADRQIVIPMVGMVQSLNVSVACALILYEAQRQRQNAGLYLRDYSLLDE 180
Query: 322 EEKQILLAE 330
EE+Q LL E
Sbjct: 181 EEQQRLLFE 189
>gi|365968389|ref|YP_004949950.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae EcWSU1]
gi|365747302|gb|AEW71529.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae EcWSU1]
Length = 229
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + + +E + NVSA R+ADA+GV VH V + R R
Sbjct: 4 KRYERICEMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGA--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E + L+ RG ++ T++ A+ ++D++ PT I++G E
Sbjct: 62 STAAGSNSWVSVKTHQTIGEAVSHLKGRGMQVLATNLSAKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYKRSNSMLPEE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|429102433|ref|ZP_19164407.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter turicensis
564]
gi|426289082|emb|CCJ90520.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter turicensis
564]
Length = 229
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L++RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRNIGDAVGHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITEEALRLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYRRANSTLPEE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|387891167|ref|YP_006321465.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia blattae DSM
4481]
gi|414594487|ref|ZP_11444123.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia blattae
NBRC 105725]
gi|386926000|gb|AFJ48954.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia blattae DSM
4481]
gi|403194482|dbj|GAB81775.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia blattae
NBRC 105725]
Length = 229
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARIREMLALRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + + L+ +G +I TH+ A+ D+D++ PT I++G E
Sbjct: 62 SAAAGSNSWVEVKTHPTIADAVSELKRQGMQILATHLSPGAVDFRDIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDLT 320
G++ EALSL+D IPM GMV S NVSVA+ ++++ A R ++ G N L+
Sbjct: 122 KTGITREALSLADQDIIIPMTGMVQSLNVSVASALILYEA--QRQRQIAGMYRRENSLLS 179
Query: 321 SEEKQILLAE 330
E+Q LL E
Sbjct: 180 DAEQQRLLFE 189
>gi|260599948|ref|YP_003212519.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter turicensis
z3032]
gi|260219125|emb|CBA34480.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter turicensis
z3032]
Length = 229
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L++RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRNIGDAVGHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITEEALRLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYRRANSTLPEE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|88809215|ref|ZP_01124724.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH
7805]
gi|88787157|gb|EAR18315.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH
7805]
Length = 229
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER V+ R + ++VE + N+SA RS DA+GV H VS S R R
Sbjct: 3 LLPRRFERLKTVLNQRMSDLTVLVEHVEKPHNLSAILRSCDAVGVLEAHAVSF--SGRPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+++W+ + + L+ R +R+ T++G+DA D D++ P A V+
Sbjct: 61 TFNSTAQGSQRWVSLRDHADISTAVHHLKERSFRLYGTNLGVDARDYRDCDFTGPCAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD-L 319
G E G+++EA +L D IPM+GMV S NVSVA L++ A+ R A L NG+ +
Sbjct: 121 GAEKWGLTEEATALMDQAIFIPMRGMVQSLNVSVATATLLYEALRQRQAAGLAPLNGEGV 180
Query: 320 TSEEKQILLAEFS 332
+E LL E++
Sbjct: 181 PAEHYSDLLFEWA 193
>gi|71282637|ref|YP_271614.1| tRNA guanosine-2'-O-methyltransferase [Colwellia psychrerythraea
34H]
gi|71148377|gb|AAZ28850.1| tRNA (guanosine-2'-O-)-methyltransferase [Colwellia psychrerythraea
34H]
Length = 235
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 100/186 (53%), Gaps = 2/186 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ R + + +EGL N++A R+ DA+G+ VH V R
Sbjct: 4 ERLARINTMLDKRQPDLTVCMEGLHKSHNLAAVVRTCDAIGISDVHAVWKSEEAEVRGGS 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G++ W+D+ + + L+++G ++ T++ A++ ++D++ PTAI++G E
Sbjct: 64 --AAGSQNWIDVHNYHKTADAIAALKAQGMQVLVTNLSDTAVNFTEIDYTKPTAIILGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G S+EAL L+D IPM GMV S NVSVA ++++ A RA + L++E +
Sbjct: 122 KFGTSEEALELADQHIVIPMVGMVQSLNVSVACSVVLYEAQRQRAAAGMYDQPRLSNERR 181
Query: 325 QILLAE 330
Q L E
Sbjct: 182 QRTLFE 187
>gi|343511488|ref|ZP_08748648.1| tRNA guanosine-2'-O-methyltransferase [Vibrio scophthalmi LMG
19158]
gi|342797930|gb|EGU33565.1| tRNA guanosine-2'-O-methyltransferase [Vibrio scophthalmi LMG
19158]
Length = 227
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + +E + NVSA R+ADA G+ +H V + R
Sbjct: 4 ERYNRIQQVLKARQTDLTFCLEEVHKPNNVSAVIRTADATGIHKIHAVW---PAKMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ + + L+++G +I T++ A+ +D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHSSIDDAIGELKAQGMQILVTNLSDTAVDFRQIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S A +L+D IPM GMV S NVSVA+ ++M+ A R
Sbjct: 121 KVGASARAKALADQDIIIPMMGMVQSLNVSVASAVIMYEAQRQR 164
>gi|283836029|ref|ZP_06355770.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter youngae ATCC
29220]
gi|291068213|gb|EFE06322.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter youngae ATCC
29220]
Length = 229
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 KRYERICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+S+G +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVQVKTHPTISDAVTQLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRENSMLPED 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|365102441|ref|ZP_09332742.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii
4_7_47CFAA]
gi|363646169|gb|EHL85417.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii
4_7_47CFAA]
Length = 229
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 3 EQRYARIREMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTM 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+ ++ + L+SRG ++ TH+ A+ ++D++ PT I++G
Sbjct: 61 LSSAAGSNSWVQVKTHPTIGDAVTHLKSRGMQVLATHLSDKAVDFREIDYTRPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTS 321
E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L
Sbjct: 121 EKTGITQEALDLADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYRRENSMLPQ 180
Query: 322 EEKQILLAE 330
+E+Q LL E
Sbjct: 181 DEQQRLLFE 189
>gi|427702678|ref|YP_007045900.1| rRNA methylase [Cyanobium gracile PCC 6307]
gi|427345846|gb|AFY28559.1| rRNA methylase [Cyanobium gracile PCC 6307]
Length = 229
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER V+ R + L++E + N+SA RS DA+GV H VS R
Sbjct: 3 LLPRRFERLRAVLDRRMGDLTLLLEHVDKPHNLSAILRSCDAVGVLEAHAVSLPG--RTP 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
++G++KW+ + + LR+ G+R+ TH+G A+ D D++ PTA V+
Sbjct: 61 TFNSTALGSQKWVALHRHGRSSDAIARLRAGGFRLYGTHLGARAVDYRDCDFTGPTAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NG 317
G E G+S+E + D IPM GMV S NVSVA IL+ A+ R + GC
Sbjct: 121 GAEKWGLSEETAAAIDQAIVIPMVGMVQSLNVSVATAILLFEALRQRQAK--GCLPSRGE 178
Query: 318 DLTSEEKQILLAEFS 332
L E+ LL E++
Sbjct: 179 GLAPEQYARLLFEWA 193
>gi|359435855|ref|ZP_09225988.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20311]
gi|359444198|ref|ZP_09234001.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20439]
gi|358029442|dbj|GAA62237.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20311]
gi|358041949|dbj|GAA70250.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20439]
Length = 228
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + +E + N+SA R+ADA+G VH V + K
Sbjct: 1 MQQTRYQRIESVLSRRQTDLTVCLEDVHKHHNLSAIVRTADAVGCHHVHAVWPEKQKWLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ WLD L + +R+ +I TH+ DA+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWLDTHLHRNIDDAVASMRAHNPDVQILATHLSEDAVDFREIDYTRPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC-NGD 318
+VG E G+S +AL +D IPM+GMV S NVSVAA +++ A R L G N +
Sbjct: 119 IVGQEKTGISPQALEYADQNIIIPMQGMVQSLNVSVAAALILFEA--QRQRDLAGLYNRN 176
Query: 319 LTSEE 323
+ EE
Sbjct: 177 MLGEE 181
>gi|419959048|ref|ZP_14475105.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
gi|295095239|emb|CBK84329.1| rRNA methylases [Enterobacter cloacae subsp. cloacae NCTC 9394]
gi|388606017|gb|EIM35230.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
Length = 229
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + + +E + NVSA R+ADA+GV VH V + R R
Sbjct: 4 KRYERICEMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGA--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E + L+ RG ++ T++ A+ ++D++ PT I++G E
Sbjct: 62 STAAGSNSWVSVKTHQTIGEAVSHLKGRGMQVLATNLSAKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYERSNSMLPEE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|303327802|ref|ZP_07358242.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio sp. 3_1_syn3]
gi|302862163|gb|EFL85097.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio sp. 3_1_syn3]
Length = 239
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Query: 117 PYL--DRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNV 174
PY R +V++S + P R+ R + V+++R + LV+ + D NV
Sbjct: 23 PYFFAARRPVAEVHMSKEVISMPKEP--TPRRRARLLEVLRHRQNDLTLVLANIHDPHNV 80
Query: 175 SATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGY 234
SA +RS DA G+ VH+ ++ R S A KW++ E + LR +G+
Sbjct: 81 SAIYRSCDAFGLSKVHLYYTNTPFPT-LGRKTSASARKWVESERHKNSADLMRTLRGQGF 139
Query: 235 RIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
++ T A + D D+ PTA+++GNE+ GV +E LSL+D + IPM GM+ SFNVS
Sbjct: 140 QVLATSCSETARPLRDWDFIRPTAVIMGNEHSGVEEELLSLADGQLYIPMYGMIQSFNVS 199
Query: 295 V 295
V
Sbjct: 200 V 200
>gi|418362495|ref|ZP_12963126.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|356686290|gb|EHI50896.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 237
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 7/181 (3%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++ R + + +E + N++A R+ADA+G+ VH V + R+ + G++
Sbjct: 1 MLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKG--TARGSQN 58
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
W+D++L L++ G +I TH+ ++ +D++ PTAI+VG E G+ +EA
Sbjct: 59 WVDVKLHPDIGSAVAELKASGMQIVATHLSESSVDFRTIDYTRPTAILVGQEKHGIGEEA 118
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC---NGDLTSEEKQILLA 329
L+L+D IPM GMV S NVSVAA +++ A R L GC LT EE+ +L
Sbjct: 119 LALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGCYQRGCPLTLEEQNTILF 176
Query: 330 E 330
E
Sbjct: 177 E 177
>gi|333929778|ref|YP_004503357.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. AS12]
gi|333934731|ref|YP_004508309.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica AS9]
gi|386331601|ref|YP_006027771.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. AS13]
gi|333476338|gb|AEF48048.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica AS9]
gi|333493838|gb|AEF53000.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. AS12]
gi|333963934|gb|AEG30707.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. AS13]
Length = 231
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 ERYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTS--RMRTLV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L+ +G +I TH+ A+ ++D++ PT +++G E
Sbjct: 62 SSAAGSNSWVNVKTHRTISDAVTHLKDQGMQILATHLSARAVDFREVDYTRPTCVLLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A + + L E
Sbjct: 122 KTGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRHNAGMYLRTHSALDEE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|409196415|ref|ZP_11225078.1| tRNA/rRNA methyltransferase SpoU [Marinilabilia salmonicolor JCM
21150]
Length = 228
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 98/177 (55%), Gaps = 10/177 (5%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
++E LS ++ R + F V++ R+ + +V+E + N SA RS D +Q VH+V
Sbjct: 5 LIEFLSQFVTVPRLDLFKRVLEERTDYITVVLEDIFHPHNASAVLRSCDCFDIQDVHIV- 63
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELW------DAPRECFNVLRSRGYRIATTHVGMDAIS 247
++ Y N V++GA KWL + + ++ R + L+ +GYRIA T A+S
Sbjct: 64 -ENRHTYNVNPDVALGASKWLTLHRYRETDKNNSTRALLD-LKDQGYRIAATVPDKKAVS 121
Query: 248 VYDMDWSC-PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
++ D + P A+V G E GVS+E ++D +IPM G +S N+SVAA IL+ H
Sbjct: 122 LHQFDITGGPFALVFGGEKTGVSEEVRKMADHFVTIPMVGFTESLNISVAAAILLQH 178
>gi|440758852|ref|ZP_20938008.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Pantoea agglomerans
299R]
gi|436427496|gb|ELP25177.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Pantoea agglomerans
299R]
Length = 232
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
++R R ++ R + + + +E + NVSA R+ADA+G+ VH V S+R R
Sbjct: 3 DQRFARIQAMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSQRMRTQ 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S G+ W+ + + L+ + ++ TH+ DA+ ++D++ PT I++G
Sbjct: 61 ASASAGSNSWVKVVTHPTIGDAVKQLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
E G+++EAL+L+D + IPM GMV S NVSVA ++++ A R
Sbjct: 121 EKTGITEEALALADRQIVIPMVGMVQSLNVSVACALILYEAQRQR 165
>gi|421493002|ref|ZP_15940360.1| hypothetical protein MU9_1530 [Morganella morganii subsp. morganii
KT]
gi|400192630|gb|EJO25768.1| hypothetical protein MU9_1530 [Morganella morganii subsp. morganii
KT]
Length = 231
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R ER ++ R + L +E + NVSA RSADA+G+ +H V + K +
Sbjct: 4 QRYERICRMMAMRQPDLTLCLEEVHKPHNVSAVIRSADAVGIHDLHAVWPEKIKTLVSS- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+++ D +L+S+G +I TH+ A+ +D++ PT I++G+E
Sbjct: 63 --AAGSNSWVNVHNHDTLAGAVTLLKSQGMQILATHLSDSAVDFRAIDFTRPTCIIMGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G+S EA+ L+D IPM GMV S NVSVAA ++++ A R
Sbjct: 121 KTGISQEAIRLADQHIMIPMSGMVQSLNVSVAAAVILYEAQRQR 164
>gi|237728947|ref|ZP_04559428.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter sp. 30_2]
gi|226909569|gb|EEH95487.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter sp. 30_2]
Length = 229
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 3 EQRYARIREMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTM 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+ ++ + L+SRG ++ TH+ A+ ++D+ PT I++G
Sbjct: 61 ASSAAGSNSWVQVKTHLTIGDAVTHLKSRGMQVLATHLSDKAVDFREIDYMRPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTS 321
E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L
Sbjct: 121 EKTGITQEALDLADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYRRENSMLPQ 180
Query: 322 EEKQILLAE 330
EE+Q LL E
Sbjct: 181 EEQQRLLFE 189
>gi|16767028|ref|NP_462643.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167992299|ref|ZP_02573397.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|374978383|ref|ZP_09719726.1| tRNA Guanosine18-2'-O- -methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378447112|ref|YP_005234744.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378452628|ref|YP_005239988.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378701631|ref|YP_005183589.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378986340|ref|YP_005249496.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378991045|ref|YP_005254209.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379703005|ref|YP_005244733.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383498379|ref|YP_005399068.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|422027986|ref|ZP_16374309.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422033028|ref|ZP_16379118.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427555638|ref|ZP_18929615.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427573250|ref|ZP_18934219.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427594634|ref|ZP_18939127.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427619161|ref|ZP_18944042.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427642693|ref|ZP_18948899.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427658015|ref|ZP_18953641.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427663245|ref|ZP_18958520.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427679345|ref|ZP_18963426.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427801261|ref|ZP_18968868.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|16422312|gb|AAL22602.1| putative tRNA/rRNA methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|205329407|gb|EDZ16171.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261248891|emb|CBG26745.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267996007|gb|ACY90892.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160280|emb|CBW19803.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914769|dbj|BAJ38743.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226797|gb|EFX51847.1| tRNA Guanosine18-2'-O- -methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323132104|gb|ADX19534.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332990592|gb|AEF09575.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|380465200|gb|AFD60603.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|414012970|gb|EKS96873.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414014075|gb|EKS97930.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414014642|gb|EKS98483.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414027866|gb|EKT11075.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414028937|gb|EKT12101.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414031507|gb|EKT14564.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414042228|gb|EKT24767.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414043081|gb|EKT25597.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414047645|gb|EKT29916.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414056043|gb|EKT37892.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414062577|gb|EKT43871.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 229
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+SRG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKSRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|343515614|ref|ZP_08752666.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sp. N418]
gi|342798045|gb|EGU33678.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sp. N418]
Length = 227
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R V+K R + +E + NVSA R+ADA G+ +H V + R
Sbjct: 4 ERYNRIQQVLKARQTDLTFCLEEVHKPNNVSAVIRTADATGIHKIHAVW---PAKMRTLT 60
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
H S GA W++++ + + L+++G +I T++ A+ +D++ PTAI++G+E
Sbjct: 61 HTSAGARNWVEVDTHSSIDDAIGELKAQGMQILVTNLSDTAVDFRQIDYTKPTAIILGSE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S A L+D IPM GMV S NVSVA+ ++M+ A R
Sbjct: 121 KVGASARAKELADQDIIIPMMGMVQSLNVSVASAVIMYEAQRQR 164
>gi|429098689|ref|ZP_19160795.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter dublinensis
582]
gi|426285029|emb|CCJ86908.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter dublinensis
582]
Length = 229
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L++RG +I TH+ ++ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRTIGDAVGHLKARGMQILATHLSDKSVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EALSL+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITEEALSLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYRRANSALPED 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|395228994|ref|ZP_10407312.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter sp. A1]
gi|424732327|ref|ZP_18160905.1| guanosine 3 -bis 3 -pyrophosphohydrolase [Citrobacter sp. L17]
gi|394717700|gb|EJF23384.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter sp. A1]
gi|422892986|gb|EKU32835.1| guanosine 3 -bis 3 -pyrophosphohydrolase [Citrobacter sp. L17]
Length = 229
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 3 EQRYARIREMLARRQPDLTVCMEEVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTM 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+ ++ + + L++RG ++ TH+ A+ D+D++ PT I++G
Sbjct: 61 ASSAAGSNSWVQVKTHLTIGDAVSHLKNRGMQVLATHLSDKAVDFRDIDYTRPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTS 321
E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L
Sbjct: 121 EKTGITQEALDLADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYRRENSMLPQ 180
Query: 322 EEKQILLAE 330
+E+Q LL E
Sbjct: 181 DEQQRLLFE 189
>gi|372277206|ref|ZP_09513242.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. SL1_M5]
gi|390437320|ref|ZP_10225858.1| tRNA guanosine-2'-O-methyltransferase [Pantoea agglomerans IG1]
Length = 232
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
++R R ++ R + + + +E + NVSA R+ADA+G+ VH V S+R R
Sbjct: 3 DQRFARIQAMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSQRMRTQ 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S G+ W+ + + L+ + ++ TH+ DA+ ++D++ PT I++G
Sbjct: 61 ASASAGSNSWVKVVTHPTIGDAVKKLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
E G+++EAL+L+D + IPM GMV S NVSVA ++++ A R
Sbjct: 121 EKTGITEEALALADRQIVIPMVGMVQSLNVSVACALILYEAQRQR 165
>gi|420368520|ref|ZP_14869268.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 1235-66]
gi|391322162|gb|EIQ78862.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 1235-66]
Length = 229
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 3 EQRYARIREMLARRQPDLTVCMEEVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTM 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+ ++ + L++RG ++ TH+ A+ ++D++ PT I++G
Sbjct: 61 ASSAAGSNSWVQVKTHRTISDAVTHLKNRGMQVLATHLSDKAVDFREIDYTRPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTS 321
E G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L
Sbjct: 121 EKTGITQEALALADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYRRENSMLPQ 180
Query: 322 EEKQILLAE 330
+E+Q LL E
Sbjct: 181 DEQQRLLFE 189
>gi|194476556|ref|YP_002048735.1| putative tRNA (guanosine-2'-O-) - methyltransferase [Paulinella
chromatophora]
gi|171191563|gb|ACB42525.1| putative tRNA (guanosine-2'-O-) - methyltransferase [Paulinella
chromatophora]
Length = 229
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R R V+ R + +++E + N+SA RS DA+G+ H VS +R R
Sbjct: 3 LLPRRFRRLQFVLNYRISDLTVILEHVEKSHNLSAILRSCDAVGIIEAHAVSL--RERLR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
++ ++G++KW+ + +++ L+ RG++I T++G+ +I + D+ P++ ++
Sbjct: 61 IFQNTALGSQKWVRLRNYNSIVPAITQLKQRGFKIYGTNLGIGSIDYRNCDFLGPSSFLL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD-L 319
G E G+S EA L D +IPM GMV S NVSVA IL+ + R + NG+ L
Sbjct: 121 GAEKWGLSQEAAELVDQSITIPMSGMVQSLNVSVATAILLFEVLRQRQVAETLPTNGEGL 180
Query: 320 TSEEKQILLAEFS 332
+ ++ LL E++
Sbjct: 181 IMQHRKKLLLEYA 193
>gi|148240118|ref|YP_001225505.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH
7803]
gi|147848657|emb|CAK24208.1| tRNA (Guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH
7803]
Length = 229
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER V+ R + ++VE + N+SA RS DA+GV H VS S R R
Sbjct: 3 LLPRRFERLRTVLNQRMADLTVLVEHVEKPHNLSAILRSCDAVGVLEAHAVSF--SGRPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+++W+ + + L+ RG+++ T++G+DA D D++ P A V+
Sbjct: 61 TFNSTAQGSQRWVPLRDHATIASAVHHLKDRGFKLYGTNLGVDARDYRDCDFTGPCAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD-L 319
G E G+++EA L D IPM+GMV S NVSVA L+ A+ R A + NG+ +
Sbjct: 121 GAEKWGLTEEATGLMDQAVFIPMRGMVQSLNVSVATATLLFEALRQRQAAGVAPHNGEGI 180
Query: 320 TSEEKQILLAEFS 332
+E+ LL E++
Sbjct: 181 PAEQYGDLLFEWA 193
>gi|251791702|ref|YP_003006423.1| tRNA guanosine-2'-O-methyltransferase [Dickeya zeae Ech1591]
gi|247540323|gb|ACT08944.1| tRNA guanosine-2'-O-methyltransferase [Dickeya zeae Ech1591]
Length = 230
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R ++ NR + + +E + NVSA R+ADA+GV VH V S R +
Sbjct: 1 MTPERYTRIREMLNNRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPTS--RMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ ++ L+ +G +I T++ A+ D+D++ PT I++
Sbjct: 59 TLVSTAAGSNSWVQVKTHRTIQDAVGHLKMQGMQILATNLSAGAVDFRDVDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NG 317
G E G+S +AL+L+D IPM GMV S NVSVA+ ++++ A R +L G +
Sbjct: 119 GQEKTGISADALALADQDIIIPMIGMVQSLNVSVASALILYEA--QRQRQLAGMYRREDS 176
Query: 318 DLTSEEKQILLAE 330
L EE+Q L+ E
Sbjct: 177 PLDEEEQQRLMFE 189
>gi|89095094|ref|ZP_01168021.1| rRNA methylase SpoU [Neptuniibacter caesariensis]
gi|89080655|gb|EAR59900.1| rRNA methylase SpoU [Oceanospirillum sp. MED92]
Length = 238
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER E+ +NV++ R + L+ + ++ N+SA R+ DA+G+ S+H V + YR
Sbjct: 1 MTPERTEKLLNVLRRRQPDLSLIADQVNKPRNLSALVRNCDAVGIHSIHTVV--PKEGYR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R + G++ ++ ++ +V+R +G ++ H AI + D++ P A+++
Sbjct: 59 TYRGTAKGSDYYVKSRAHESVENAISVVRQQGMKVVAAHFSDKAIDYREFDFTQPCALLM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E +GVSD A +SD IPM GMV S NVS AAGI++ A R
Sbjct: 119 GAEKQGVSDVAAQMSDAHVVIPMMGMVSSLNVSTAAGIILVEAQHQR 165
>gi|374584445|ref|ZP_09657537.1| tRNA/rRNA methyltransferase (SpoU) [Leptonema illini DSM 21528]
gi|373873306|gb|EHQ05300.1| tRNA/rRNA methyltransferase (SpoU) [Leptonema illini DSM 21528]
Length = 246
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 23/229 (10%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
++ LS +L E R +F +V+ R+ V +V+E L D N SA RS +A G+Q VH+V
Sbjct: 9 IQELSGFLTESRFRKFRDVLSQRTRFVSVVLEDLYDPHNGSACLRSCEACGIQEVHIV-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPR-----------------ECFNVLRSRGYRIA 237
+ + V+MG+ +WLD+ +P +C+ LR RGY I
Sbjct: 67 EERNAFMTVEGVTMGSARWLDLRRHYSPDAQGNAILSDEHSGASIGQCYAGLRDRGYTIV 126
Query: 238 --TTHVGMDAISVYD-MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
T H D +D + S P A+V G+E G+S+ A++ +DL +P+ G V+S+N+S
Sbjct: 127 AMTPHPAADKAVAFDRLPLSGPVAVVFGSERDGLSETAMNEADLHTRLPIHGFVESYNIS 186
Query: 295 VAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIV 343
VA + + H L+ L+ E+ +L + LR S + +V
Sbjct: 187 VACALTVFHLAGRIRNELLPEQWQLSGEDHDSVLLSW-LRRSIRNVELV 234
>gi|238750786|ref|ZP_04612284.1| tRNA guanosine-2'-O-methyltransferase [Yersinia rohdei ATCC 43380]
gi|238710930|gb|EEQ03150.1| tRNA guanosine-2'-O-methyltransferase [Yersinia rohdei ATCC 43380]
Length = 230
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ VH + + R +
Sbjct: 4 QRYARICGMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTEMYTRLSS 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+S+G +I TH+ A+ ++D++ PT I++G E
Sbjct: 64 --AAGSNSWVQVKTHAHITDAITYLKSQGMQILATHLSDKAVDFREIDYTLPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S+EAL+L+D IPM GMV S NVSVA+ ++++ A R A L +
Sbjct: 122 KTGISEEALALADKDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRAQSALPKD 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAQVAKRK 202
>gi|395234030|ref|ZP_10412261.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter sp. Ag1]
gi|394731396|gb|EJF31177.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter sp. Ag1]
Length = 229
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E L+S G +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVQVKTHKTIGEAVRQLKSGGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L
Sbjct: 122 KTGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRENSTLPEA 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|270265245|ref|ZP_06193507.1| hypothetical protein SOD_l00950 [Serratia odorifera 4Rx13]
gi|270040879|gb|EFA13981.1| hypothetical protein SOD_l00950 [Serratia odorifera 4Rx13]
Length = 231
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 ERYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTS--RMRTLV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L+ +G +I TH+ A+ ++D++ PT +++G E
Sbjct: 62 SSAAGSNSWVNVKTHRTISDAVTHLKDQGMQILATHLSARAVDFREVDYTRPTCVLLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A + L E
Sbjct: 122 KTGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRHNAGMYLRTRSALDEE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|308188674|ref|YP_003932805.1| RNA methylase [Pantoea vagans C9-1]
gi|308059184|gb|ADO11356.1| putative RNA methylase [Pantoea vagans C9-1]
Length = 232
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
++R R ++ R + + + +E + NVSA R+ADA+G+ VH V S+R R
Sbjct: 3 DQRFARIQAMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSQRMRTQ 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S G+ W+ + + L+ + ++ TH+ DA+ ++D++ PT I++G
Sbjct: 61 ASASAGSNSWVKVVTHPTIGDAVKQLKQQKMQVLATHLSDDAVDFREIDYTLPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
E G+++EAL+L+D + IPM GMV S NVSVA ++++ A R
Sbjct: 121 EKTGITEEALALADRKIVIPMVGMVQSLNVSVACALILYEAQRQR 165
>gi|386743180|ref|YP_006216359.1| tRNA guanosine-2'-O-methyltransferase [Providencia stuartii MRSN
2154]
gi|384479873|gb|AFH93668.1| tRNA guanosine-2'-O-methyltransferase [Providencia stuartii MRSN
2154]
Length = 237
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 15/211 (7%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E R R ++ R + + +E + NVSA RSADA+G+ ++H + D ++ + +
Sbjct: 3 ERRYRRICQMMAMRQPDLTICLEEVHKPHNVSAIVRSADAVGIHTIHAIWPD--QQVKLS 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+++ + + L+S+ ++ TH+ AI ++D++ PT I+VG
Sbjct: 61 VSSAAGSNSWVNVISHPSTEAAISQLKSQNMQVLVTHLSEQAIDFREIDYTQPTCIMVGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDL 319
E +G+S +AL L+D IPM GMV S NVSVA+ ++++ A R +L G L
Sbjct: 121 EKKGISAKALELADKHIIIPMVGMVQSLNVSVASALILYEA--QRQRQLAGMYSRETSLL 178
Query: 320 TSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
+ +E+Q L E ++ E AKRK
Sbjct: 179 SEQEQQQWLFE-------GGYPVLAEVAKRK 202
>gi|410696250|gb|AFV75318.1| rRNA methylase [Thermus oshimai JL-2]
Length = 191
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRY 200
+ E R+ R V++ R + +++E + N+SA R+ DA+GV H V+ Y
Sbjct: 1 MTEARRRRIEEVLRRRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTY 60
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
E S G+ KW+ + + F LR++G+R+ T + A+ ++D++ P A+V
Sbjct: 61 NET---SGGSHKWVYLRVHPDTPSAFAHLRAQGFRVYATALREGALDYREVDYTRPVAVV 117
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+G E GVS+EAL+L+D IPM GMV S NVSVAA +++ A R
Sbjct: 118 LGAEKWGVSEEALALADGHIHIPMLGMVQSLNVSVAAAVILFEAQRQR 165
>gi|320539303|ref|ZP_08038973.1| putative tRNA mG18-2'-O-methyltransferase, SAM-dependen [Serratia
symbiotica str. Tucson]
gi|320030695|gb|EFW12704.1| putative tRNA mG18-2'-O-methyltransferase, SAM-dependen [Serratia
symbiotica str. Tucson]
Length = 231
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 103/190 (54%), Gaps = 8/190 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ R + + +E + NVSA R+ADA+GV VH V + R R
Sbjct: 4 ERYARISEILATRQPDLTVCLEQVLKPHNVSAIIRTADAVGVHQVHAVW--PTTRMRTLV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + N L+++G ++ TH+ A+ ++D++ PT +++G E
Sbjct: 62 SSAAGSNNWVNVKTHHTISDTVNHLKTQGMQVLATHLSSRAVDFREVDYTRPTCVLLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDLT 320
G++DEAL+L+D IPM GMV S NVSVA+ ++++ A R + G L
Sbjct: 122 KTGMTDEALALADQDIIIPMIGMVQSLNVSVASALILYEA--QRQRQNAGLYHRDRSMLD 179
Query: 321 SEEKQILLAE 330
EE+Q LL E
Sbjct: 180 EEEQQRLLFE 189
>gi|386824716|ref|ZP_10111846.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica PRI-2C]
gi|386378393|gb|EIJ19200.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica PRI-2C]
Length = 231
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 102/188 (54%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 ERYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTS--RMRTLV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L+ +G +I TH+ A+ ++D++ PT +++G E
Sbjct: 62 SSAAGSNSWVNVKTHRTISDAVTHLKDQGMQILATHLSTRAVDFREVDYTRPTCVLLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A + + L E
Sbjct: 122 KTGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRHNAGMYLRTHSALDEE 181
Query: 323 EKQILLAE 330
++Q LL E
Sbjct: 182 QQQRLLFE 189
>gi|417542590|ref|ZP_12193990.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353658365|gb|EHC98571.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
Length = 229
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIW--PSSRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|194333759|ref|YP_002015619.1| tRNA guanosine-2'-O-methyltransferase [Prosthecochloris aestuarii
DSM 271]
gi|194311577|gb|ACF45972.1| tRNA guanosine-2'-O-methyltransferase [Prosthecochloris aestuarii
DSM 271]
Length = 216
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER + +++ R + +V++ ++ N++A R+ D++G++++H VS S R+ +
Sbjct: 5 ERFHKIRRLLEQRQPDLTVVMDNVNKPHNLAAIIRTCDSVGIETIHAVSNRPS--IRKKQ 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ +W+ + L ++ N L+S G R+ H ++ +D++ PTAIV+G E
Sbjct: 63 KTAGGSTRWVQLSLHESMENLANTLKSNGTRLLAAHYSSTSVDFRSIDYTRPTAIVMGAE 122
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G S + +SL D IPM+GM +S NVSVAA +++ A R GC + E++
Sbjct: 123 KLGPSSDTISLVDQAIHIPMQGMAESLNVSVAAAVILFEA--QRQRLAAGCYEKIALEKE 180
Query: 325 QI 326
+
Sbjct: 181 TL 182
>gi|215488946|ref|YP_002331377.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O127:H6
str. E2348/69]
gi|312967980|ref|ZP_07782191.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 2362-75]
gi|417758037|ref|ZP_12406101.1| spoU rRNA Methylase family protein [Escherichia coli DEC2B]
gi|418999096|ref|ZP_13546676.1| spoU rRNA Methylase family protein [Escherichia coli DEC1A]
gi|419004412|ref|ZP_13551922.1| spoU rRNA Methylase family protein [Escherichia coli DEC1B]
gi|419010088|ref|ZP_13557503.1| spoU rRNA Methylase family protein [Escherichia coli DEC1C]
gi|419015799|ref|ZP_13563134.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC1D]
gi|419026180|ref|ZP_13573395.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC2A]
gi|419031320|ref|ZP_13578464.1| spoU rRNA Methylase family protein [Escherichia coli DEC2C]
gi|419036952|ref|ZP_13584025.1| spoU rRNA Methylase family protein [Escherichia coli DEC2D]
gi|419042015|ref|ZP_13589032.1| spoU rRNA Methylase family protein [Escherichia coli DEC2E]
gi|215267018|emb|CAS11463.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O127:H6
str. E2348/69]
gi|312287239|gb|EFR15148.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 2362-75]
gi|377839362|gb|EHU04451.1| spoU rRNA Methylase family protein [Escherichia coli DEC1A]
gi|377839754|gb|EHU04834.1| spoU rRNA Methylase family protein [Escherichia coli DEC1C]
gi|377842901|gb|EHU07950.1| spoU rRNA Methylase family protein [Escherichia coli DEC1B]
gi|377853151|gb|EHU18054.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC1D]
gi|377859194|gb|EHU24029.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC2A]
gi|377870965|gb|EHU35638.1| spoU rRNA Methylase family protein [Escherichia coli DEC2B]
gi|377873300|gb|EHU37938.1| spoU rRNA Methylase family protein [Escherichia coli DEC2C]
gi|377875071|gb|EHU39691.1| spoU rRNA Methylase family protein [Escherichia coli DEC2D]
gi|377886727|gb|EHU51208.1| spoU rRNA Methylase family protein [Escherichia coli DEC2E]
Length = 229
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TTH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILTTHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPETE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|157149268|ref|YP_001456587.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter koseri ATCC
BAA-895]
gi|157086473|gb|ABV16151.1| hypothetical protein CKO_05108 [Citrobacter koseri ATCC BAA-895]
Length = 229
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV +H V S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEIHAVWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVSHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|406673730|ref|ZP_11080950.1| hypothetical protein HMPREF9700_01492 [Bergeyella zoohelcum CCUG
30536]
gi|405585849|gb|EKB59649.1| hypothetical protein HMPREF9700_01492 [Bergeyella zoohelcum CCUG
30536]
Length = 225
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
LS +L EER E+ + S + V+E + F N +A RS +A G V V+
Sbjct: 11 LSGFLTEERLEKINHFALTSSAYILPVLEDVYQFRNAAAIVRSVEACGFHKV--VALQDK 68
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
+ N V+ GA+ W+++E + V++ RGYR+ +A S+ + PT
Sbjct: 69 NSFEPNIKVTKGADTWVEVEKMPLTKASLQVIKDRGYRLVAVSPERNATSLPEFSIQQPT 128
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
A++ G E +GVS++AL ++D IPM G SFNVSVAA I M+
Sbjct: 129 ALLFGTEWKGVSEDALEMADETLMIPMYGWTKSFNVSVAAAICMY 173
>gi|398346997|ref|ZP_10531700.1| spoU protein [Leptospira broomii str. 5399]
Length = 240
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 110/197 (55%), Gaps = 12/197 (6%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L E R+++ V+ R+ + +V+E + N SAT R+A+ LG+ V+ V +S YR
Sbjct: 24 LSESRRQKIEEVLSFRTKYLTIVLEDIFQPFNASATLRTAECLGLSDVYAVENRNS--YR 81
Query: 202 ENRHVSMGAEKWLDIELWDAPRE-----CFNVLRSRGYRI-ATTHVGMDAI-SVYDMDWS 254
N V+ GA+KWL I + + RE C N L+ GYRI AT+ ++ + ++ ++
Sbjct: 82 PNAGVAKGAQKWLRIHRYQSMREDNTRFCLNHLKESGYRIVATSPRNVETLHTLENLPLD 141
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
PTA++ G E G+S+ ALS +DL +PM G +S+N+SV I++ H + R R V
Sbjct: 142 RPTAVLFGAEEIGLSEIALSQADLHLRLPMFGFTESYNLSVTVAIVLSHLI-PRVRREV- 199
Query: 315 CNGDLTSEEKQILLAEF 331
G +EE+ + L F
Sbjct: 200 -EGWALTEEEAVHLRNF 215
>gi|377578524|ref|ZP_09807501.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia hermannii
NBRC 105704]
gi|377540110|dbj|GAB52666.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia hermannii
NBRC 105704]
Length = 242
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V S R
Sbjct: 4 QRYARIREMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMSTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ ++ L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRTIQDAVGELKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ +AL+L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQQALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRENSTLADE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|392552498|ref|ZP_10299635.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas spongiae
UST010723-006]
Length = 232
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 5/192 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ + R +R +V+ R + + ++ + N+SA R+ADA+G VH V +R
Sbjct: 1 MADNRYKRVKSVLDKRQLDLTVCLDEVHKHHNLSAIVRTADAVGCHHVHAVWPREQRRLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSR--GYRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ W++ + D + LR + G +I T++ A+ ++D++ PTA+
Sbjct: 61 NN--TSGGSKNWVETHMHDDIDDAVKALREQIPGVQILATNLSDSAVDFREIDYTKPTAV 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR-LVGCNGD 318
+VG E G+SD+AL+ +D IPM+GMV S NVSVAA ++++ A R + N
Sbjct: 119 IVGQERDGISDKALAHADQHIIIPMEGMVQSLNVSVAAALILYEAQRQRENADMYQPNDH 178
Query: 319 LTSEEKQILLAE 330
L K LL E
Sbjct: 179 LDKNTKHTLLFE 190
>gi|161616825|ref|YP_001590790.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168464947|ref|ZP_02698839.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418761434|ref|ZP_13317578.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418765419|ref|ZP_13321504.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418770229|ref|ZP_13326252.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418777810|ref|ZP_13333736.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418781879|ref|ZP_13337754.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418784983|ref|ZP_13340817.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418804037|ref|ZP_13359648.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419789860|ref|ZP_14315537.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419794653|ref|ZP_14320262.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|161366189|gb|ABX69957.1| hypothetical protein SPAB_04644 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195632097|gb|EDX50581.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392614227|gb|EIW96676.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392614687|gb|EIW97132.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392737598|gb|EIZ94752.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392740322|gb|EIZ97443.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392740435|gb|EIZ97555.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392743267|gb|EJA00341.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392745644|gb|EJA02668.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392753158|gb|EJA10096.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392771869|gb|EJA28581.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 229
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|378581686|ref|ZP_09830330.1| tRNA (Guanosine-2'-O-)-methyltransferase [Pantoea stewartii subsp.
stewartii DC283]
gi|377815600|gb|EHT98711.1| tRNA (Guanosine-2'-O-)-methyltransferase [Pantoea stewartii subsp.
stewartii DC283]
Length = 233
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + + +E + NVSA R+ADA+G+ VH V +R R
Sbjct: 4 QRFARIQEMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PGQRMRTQA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S G+ W+++ + + + L+++ +I T++ DA+ ++D++ PT I++G E
Sbjct: 62 SASAGSNSWVNVVTHRSISDAISHLKTQDMQILATNLSADAVDFREIDYTKPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++DEAL+L+D IPM GMV S NVSVA+ ++++ A R A + L +
Sbjct: 122 KTGITDEALALADHHIIIPMVGMVQSLNVSVASALILYEAQRQRQNAGMYRRQSSLLAEK 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|218697372|ref|YP_002405039.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 55989]
gi|332282578|ref|ZP_08394991.1| tRNA guanosine-2'-O-methyltransferase [Shigella sp. D9]
gi|407471644|ref|YP_006781913.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407479704|ref|YP_006776853.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2011C-3493]
gi|410480262|ref|YP_006767808.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2009EL-2050]
gi|417146958|ref|ZP_11987805.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
1.2264]
gi|417807333|ref|ZP_12454263.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. LB226692]
gi|417835073|ref|ZP_12481513.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 01-09591]
gi|417866219|ref|ZP_12511261.1| hypothetical protein C22711_3149 [Escherichia coli O104:H4 str.
C227-11]
gi|419377761|ref|ZP_13918777.1| spoU rRNA Methylase family protein [Escherichia coli DEC14B]
gi|419383098|ref|ZP_13924040.1| spoU rRNA Methylase family protein [Escherichia coli DEC14C]
gi|419388394|ref|ZP_13929261.1| spoU rRNA Methylase family protein [Escherichia coli DEC14D]
gi|419929124|ref|ZP_14446813.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 541-1]
gi|422989867|ref|ZP_16980639.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. C227-11]
gi|422996762|ref|ZP_16987525.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. C236-11]
gi|423001914|ref|ZP_16992667.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 09-7901]
gi|423005570|ref|ZP_16996315.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 04-8351]
gi|423012076|ref|ZP_17002808.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-3677]
gi|423021303|ref|ZP_17012010.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4404]
gi|423026470|ref|ZP_17017165.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4522]
gi|423032291|ref|ZP_17022977.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4623]
gi|423035162|ref|ZP_17025840.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423040288|ref|ZP_17030957.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423046972|ref|ZP_17037631.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423055511|ref|ZP_17044317.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423057503|ref|ZP_17046302.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|429721338|ref|ZP_19256257.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9450]
gi|429773236|ref|ZP_19305252.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02030]
gi|429778599|ref|ZP_19310567.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429782435|ref|ZP_19314361.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02092]
gi|429787851|ref|ZP_19319740.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02093]
gi|429793648|ref|ZP_19325492.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02281]
gi|429800229|ref|ZP_19332019.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02318]
gi|429803840|ref|ZP_19335598.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02913]
gi|429808487|ref|ZP_19340204.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-03439]
gi|429814186|ref|ZP_19345859.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-04080]
gi|429819390|ref|ZP_19351021.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-03943]
gi|429905740|ref|ZP_19371716.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429909878|ref|ZP_19375840.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9941]
gi|429915744|ref|ZP_19381690.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429920792|ref|ZP_19386719.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429926600|ref|ZP_19392511.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429930533|ref|ZP_19396432.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429937069|ref|ZP_19402954.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429942753|ref|ZP_19408625.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429945433|ref|ZP_19411293.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429952991|ref|ZP_19418836.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429956348|ref|ZP_19422178.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec12-0466]
gi|432482970|ref|ZP_19724919.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE210]
gi|432752112|ref|ZP_19986688.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE29]
gi|432767044|ref|ZP_20001457.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE48]
gi|432807890|ref|ZP_20041803.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE91]
gi|432829275|ref|ZP_20062890.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE135]
gi|432931151|ref|ZP_20131423.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE184]
gi|433195708|ref|ZP_20379677.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE90]
gi|218354104|emb|CAV00665.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 55989]
gi|332104930|gb|EGJ08276.1| tRNA guanosine-2'-O-methyltransferase [Shigella sp. D9]
gi|340732302|gb|EGR61440.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 01-09591]
gi|340738061|gb|EGR72312.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. LB226692]
gi|341919508|gb|EGT69119.1| hypothetical protein C22711_3149 [Escherichia coli O104:H4 str.
C227-11]
gi|354859002|gb|EHF19451.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. C236-11]
gi|354862889|gb|EHF23326.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. C227-11]
gi|354863456|gb|EHF23889.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 04-8351]
gi|354871493|gb|EHF31891.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 09-7901]
gi|354878028|gb|EHF38386.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-3677]
gi|354886044|gb|EHF46335.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4404]
gi|354890251|gb|EHF50494.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4522]
gi|354893887|gb|EHF54085.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4623]
gi|354905194|gb|EHF65278.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354908860|gb|EHF68902.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354910743|gb|EHF70760.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354913444|gb|EHF73436.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|354920845|gb|EHF80771.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|378215300|gb|EHX75599.1| spoU rRNA Methylase family protein [Escherichia coli DEC14B]
gi|378225039|gb|EHX85240.1| spoU rRNA Methylase family protein [Escherichia coli DEC14C]
gi|378228392|gb|EHX88550.1| spoU rRNA Methylase family protein [Escherichia coli DEC14D]
gi|386162898|gb|EIH24694.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
1.2264]
gi|388404215|gb|EIL64703.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 541-1]
gi|406775424|gb|AFS54848.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407052001|gb|AFS72052.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2011C-3493]
gi|407067679|gb|AFS88726.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2009EL-2071]
gi|429356118|gb|EKY92800.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02030]
gi|429357056|gb|EKY93731.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429358747|gb|EKY95415.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02092]
gi|429371668|gb|EKZ08221.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02093]
gi|429373747|gb|EKZ10290.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02281]
gi|429376159|gb|EKZ12689.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02318]
gi|429389026|gb|EKZ25451.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02913]
gi|429390583|gb|EKZ26994.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-03439]
gi|429391034|gb|EKZ27440.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-03943]
gi|429401463|gb|EKZ37765.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-04080]
gi|429402386|gb|EKZ38677.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429406326|gb|EKZ42586.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9450]
gi|429414012|gb|EKZ50191.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429416470|gb|EKZ52626.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429424228|gb|EKZ60331.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429428609|gb|EKZ64685.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429432663|gb|EKZ68701.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429439732|gb|EKZ75713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429443896|gb|EKZ79843.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429448647|gb|EKZ84557.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429455120|gb|EKZ90978.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec12-0466]
gi|429458743|gb|EKZ94565.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9941]
gi|431003988|gb|ELD19221.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE210]
gi|431293042|gb|ELF83422.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE29]
gi|431307044|gb|ELF95345.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE48]
gi|431352747|gb|ELG39512.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE91]
gi|431382218|gb|ELG66558.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE135]
gi|431460586|gb|ELH40874.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE184]
gi|431713156|gb|ELJ77413.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE90]
Length = 229
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ RG +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|429091297|ref|ZP_19153975.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter dublinensis
1210]
gi|426744124|emb|CCJ80088.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter dublinensis
1210]
Length = 229
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L++RG +I TH+ ++ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRTIGDAVGHLKARGMQILATHLSDKSVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITEEALNLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYRRANSALPED 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|410634238|ref|ZP_11344875.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola arctica
BSs20135]
gi|410146094|dbj|GAC21742.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola arctica
BSs20135]
Length = 236
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
Y+ ER R + + R S+ L +E L NVSA RS DA+GV VH V D+
Sbjct: 6 YMSPERYARIRHFLSLRQPSLTLCLEQLDKPHNVSAIVRSCDAVGVYEVHAV-WDNKPEI 64
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
R++ +MG+E W+ + + L+++ ++ T++ +A+ ++D++ PTAI+
Sbjct: 65 RKS--TAMGSENWVYTKEHSCIENAVSHLKAQNMQVLVTNLSDNAVDFREIDYTQPTAII 122
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC--NGD 318
+G E G +DEA++L+ IPM GMV S NVSVAA ++++ A R +L G
Sbjct: 123 LGQEKYGATDEAVALASQDIIIPMVGMVQSLNVSVAAALILYEA--QRQRQLAGMYNTQQ 180
Query: 319 LTSEEKQILLAE 330
LT + Q +L E
Sbjct: 181 LTEQACQKMLFE 192
>gi|422016022|ref|ZP_16362612.1| tRNA guanosine-2'-O-methyltransferase [Providencia burhodogranariea
DSM 19968]
gi|414095469|gb|EKT57131.1| tRNA guanosine-2'-O-methyltransferase [Providencia burhodogranariea
DSM 19968]
Length = 237
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 15/211 (7%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E R R ++ R + + +E + NVSA RSADA+G+ +H + D + + +
Sbjct: 3 ERRYRRICQMMAMRQPDLTICLEEVHKPHNVSAIVRSADAVGIHQIHAIWPDQNVKLSVS 62
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+ + + + + ++S+ ++ T++ A+ ++D++ PT I+VG
Sbjct: 63 S--AAGSNSWVKVISHKSTEDAISQIKSQNMQVLVTNLSEHAVDFREIDYTRPTCIMVGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDL 319
E +G+S +ALSLSD IPM GMV S NVSVA+ ++++ A R +L G N L
Sbjct: 121 EKKGISSKALSLSDQHIIIPMAGMVQSLNVSVASALILYEA--QRQRQLAGMYSRENSVL 178
Query: 320 TSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
+++E+Q L E ++ E A+RK
Sbjct: 179 SAQEQQEWLFE-------GGYPVLAEVARRK 202
>gi|423142229|ref|ZP_17129867.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379050158|gb|EHY68051.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 229
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG ++ TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAYLKGRGMQVLATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|197250973|ref|YP_002148674.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|198245054|ref|YP_002217703.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|416427425|ref|ZP_11693560.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416432637|ref|ZP_11696316.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416437503|ref|ZP_11698853.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416443443|ref|ZP_11703056.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416450343|ref|ZP_11707472.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416460248|ref|ZP_11714631.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416463640|ref|ZP_11716055.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416479809|ref|ZP_11722566.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416490062|ref|ZP_11726640.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416501959|ref|ZP_11732507.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416508293|ref|ZP_11735997.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416517282|ref|ZP_11739403.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416525383|ref|ZP_11741596.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416538854|ref|ZP_11749618.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416541320|ref|ZP_11750907.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416552784|ref|ZP_11757345.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416562214|ref|ZP_11761971.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416571102|ref|ZP_11766501.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416579987|ref|ZP_11771561.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416586408|ref|ZP_11775492.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416589490|ref|ZP_11777075.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416597625|ref|ZP_11782206.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416607067|ref|ZP_11788281.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416611507|ref|ZP_11790881.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416623018|ref|ZP_11797196.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416631128|ref|ZP_11801041.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416645113|ref|ZP_11807279.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416648172|ref|ZP_11808885.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416661306|ref|ZP_11815480.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416668088|ref|ZP_11818714.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416681237|ref|ZP_11823647.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416695701|ref|ZP_11827778.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416709057|ref|ZP_11833861.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416712952|ref|ZP_11836614.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416721127|ref|ZP_11842658.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416722855|ref|ZP_11843681.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416735003|ref|ZP_11851405.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416741453|ref|ZP_11855147.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416746595|ref|ZP_11857885.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416755260|ref|ZP_11861921.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416765014|ref|ZP_11868437.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416771836|ref|ZP_11873015.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|417361533|ref|ZP_12135404.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|417376739|ref|ZP_12145843.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|417470807|ref|ZP_12166912.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|418485022|ref|ZP_13054009.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418491165|ref|ZP_13057692.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418494721|ref|ZP_13061172.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418499862|ref|ZP_13066263.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418505138|ref|ZP_13071487.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418510370|ref|ZP_13076651.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418525067|ref|ZP_13091050.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|421883550|ref|ZP_16314780.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|440765833|ref|ZP_20944845.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440767396|ref|ZP_20946374.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440773477|ref|ZP_20952371.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445143048|ref|ZP_21386329.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445149186|ref|ZP_21389011.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|197214676|gb|ACH52073.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197939570|gb|ACH76903.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|322612909|gb|EFY09861.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618974|gb|EFY15861.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625249|gb|EFY22076.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322630083|gb|EFY26856.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634275|gb|EFY31010.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635824|gb|EFY32533.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642973|gb|EFY39551.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645034|gb|EFY41565.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649866|gb|EFY46289.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653073|gb|EFY49408.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661108|gb|EFY57336.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662403|gb|EFY58616.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667281|gb|EFY63447.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674342|gb|EFY70435.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678450|gb|EFY74511.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680956|gb|EFY76990.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687108|gb|EFY83081.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323193170|gb|EFZ78388.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198251|gb|EFZ83357.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323200869|gb|EFZ85939.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323210464|gb|EFZ95350.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216247|gb|EGA00975.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220470|gb|EGA04924.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323225334|gb|EGA09568.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228448|gb|EGA12579.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234269|gb|EGA18357.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237254|gb|EGA21321.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244773|gb|EGA28777.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323245852|gb|EGA29842.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250965|gb|EGA34841.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257287|gb|EGA40986.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262211|gb|EGA45772.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264578|gb|EGA48082.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323268867|gb|EGA52325.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|353583745|gb|EHC44021.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353592172|gb|EHC50264.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|353624340|gb|EHC73396.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|363552482|gb|EHL36771.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363559044|gb|EHL43222.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363561115|gb|EHL45244.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363561216|gb|EHL45344.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363563956|gb|EHL48021.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363573296|gb|EHL57182.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363574599|gb|EHL58466.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366056665|gb|EHN20977.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366061482|gb|EHN25728.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366063409|gb|EHN27628.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366068759|gb|EHN32893.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366070050|gb|EHN34167.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366076876|gb|EHN40909.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366829802|gb|EHN56677.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207014|gb|EHP20515.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|379986934|emb|CCF87053.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|436411484|gb|ELP09435.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|436415822|gb|ELP13737.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436420101|gb|ELP17970.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444848775|gb|ELX73896.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444858481|gb|ELX83467.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
Length = 229
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|212705009|ref|ZP_03313137.1| hypothetical protein DESPIG_03077 [Desulfovibrio piger ATCC 29098]
gi|212671561|gb|EEB32044.1| RNA methyltransferase, TrmH family [Desulfovibrio piger ATCC 29098]
Length = 196
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
RK R +V+ +R + LV+ + D NVSA +RS DA GV VH+ D+ R
Sbjct: 9 RKARLGSVLAHRQPDLTLVLANIHDPHNVSAIYRSCDAFGVDKVHLYYTDTPFPVL-GRK 67
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
S A KW++ +E LR++ +I T A + D++ PTAI++GNE+
Sbjct: 68 TSASARKWVESVRHRDRQELETSLRAQNMQILATTFTPTAKPLRTWDFTRPTAIIMGNEH 127
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
GV++E +S++D IPM GM+ SFNVSVA+ I++ A R
Sbjct: 128 SGVNEELISMADGELYIPMYGMIQSFNVSVASAIILSEACRQR 170
>gi|320449724|ref|YP_004201820.1| tRNA guanosine-2'-O-methyltransferase [Thermus scotoductus SA-01]
gi|320149893|gb|ADW21271.1| tRNA guanosine-2'-O-methyltransferase [Thermus scotoductus SA-01]
Length = 191
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 94/168 (55%), Gaps = 4/168 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRY 200
+ E R+ R V++ R + +++E + N+SA R+ DA+G+ H V+ +
Sbjct: 1 MTEARRRRIEEVLRRRQPDLTVLLENVHKPHNLSAILRTCDAVGILEAHAVNPTGGVPTF 60
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
E S G+ KW+ + + + +E + L+ +G+R+ T + DA ++D++ PTAI+
Sbjct: 61 NET---SGGSHKWVYLRVHPSIQEAISFLKEKGFRVYATALREDARDFREVDYTQPTAIL 117
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+G E GVS+E L+LS IPM GMV S NVSVAA +++ A R
Sbjct: 118 LGAEKWGVSEETLALSHGAIKIPMLGMVQSLNVSVAAAVILFEAQRQR 165
>gi|205354655|ref|YP_002228456.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|375125543|ref|ZP_09770707.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|445131783|ref|ZP_21381887.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|205274436|emb|CAR39468.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326629793|gb|EGE36136.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|444849922|gb|ELX75030.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
Length = 229
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIW--PSSRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|238789531|ref|ZP_04633315.1| tRNA guanosine-2'-O-methyltransferase [Yersinia frederiksenii ATCC
33641]
gi|238722284|gb|EEQ13940.1| tRNA guanosine-2'-O-methyltransferase [Yersinia frederiksenii ATCC
33641]
Length = 230
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ VH + + R +
Sbjct: 4 QRYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLSS 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+S+G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 64 --AAGSNSWVQVKTHSHIADAITHLKSQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S EAL+L+D IPM GMV S NVSVA+ ++++ A R A L E
Sbjct: 122 KTGISQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRAQSVLPEE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
++Q LL E ++ + AKRK
Sbjct: 182 QQQRLLFE-------GGYPVLAQVAKRK 202
>gi|352096318|ref|ZP_08957198.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8016]
gi|351677012|gb|EHA60163.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8016]
Length = 229
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R ER V+ R ++ ++VE + N+SA RS DA+GV H VS S R R
Sbjct: 3 ILPRRFERLRAVLNQRMANLTVLVEHVDKPHNLSAILRSCDAVGVLEAHAVSL--SGRSR 60
Query: 202 ENRHVSMGAEKWLDIELWDAP--RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
+ G+++W + L D P L+ RG+ + T++ +DA+ D D++ P+A
Sbjct: 61 TYNSTAQGSQRW--VPLHDHPNIEAAVKKLKDRGFHLYGTNLSVDAVDYRDCDFTGPSAF 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD 318
V+G E G+S+ A L D IPM+GMV S NVSVA L+ A+ R A L +G+
Sbjct: 119 VLGAEKWGLSENATQLMDTDVFIPMRGMVQSLNVSVATATLLFEALRQREAAGLAPSDGE 178
Query: 319 -LTSEEKQILLAEFS 332
+ +E LL E++
Sbjct: 179 GIPAENYDNLLFEWA 193
>gi|317485615|ref|ZP_07944491.1| SpoU rRNA methylase [Bilophila wadsworthia 3_1_6]
gi|345886027|ref|ZP_08837307.1| hypothetical protein HMPREF0178_00081 [Bilophila sp. 4_1_30]
gi|316923152|gb|EFV44362.1| SpoU rRNA methylase [Bilophila wadsworthia 3_1_6]
gi|345041427|gb|EGW45584.1| hypothetical protein HMPREF0178_00081 [Bilophila sp. 4_1_30]
Length = 196
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R+ + V++ R + LV+ + D NVSA +RSADA GV ++H+ D++ +
Sbjct: 5 ITERRRAKLERVLRWRQKDLTLVLANIHDPHNVSAIYRSADAFGVAALHLYYTDTA--FP 62
Query: 202 E-NRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
E + S A KW++ + E + L++ G++I T ++ + D++ PTA++
Sbjct: 63 ELGKKSSASARKWVESVRHRSAEELYAALKAGGHQILATSCTPESKPLGAYDFTKPTAVI 122
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+GNE+ GV E SL D IPM GM+ SFNVSVAA +++ A R
Sbjct: 123 MGNEHSGVPAELNSLVDGEVYIPMYGMIQSFNVSVAAAVILSEASRQR 170
>gi|226327607|ref|ZP_03803125.1| hypothetical protein PROPEN_01478 [Proteus penneri ATCC 35198]
gi|225204133|gb|EEG86487.1| RNA methyltransferase, TrmH family [Proteus penneri ATCC 35198]
Length = 229
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 10/175 (5%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
++CL E + NV+A R+ADA+G+ +H + + R + + G+ W+++E
Sbjct: 10 TICL--EEVHKSHNVAAVIRTADAVGIPKIHAIWPEEKMRMLVSP--AAGSNSWVNVETH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ R++G ++ TH+ A+ ++D++ PT I++G E G+S +A++L+D
Sbjct: 66 PTITDAVGAFRTQGMQVLATHLSDKAVDFREIDYTRPTCIIMGQEKTGISQDAIALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG----CNGDLTSEEKQILLAE 330
+PM GMV S NVSVA+ ++++ A R + G LT EE+QILL E
Sbjct: 126 IIVPMMGMVQSLNVSVASALILYEA--QRQRQAAGMYNRTESTLTEEEQQILLFE 178
>gi|212711590|ref|ZP_03319718.1| hypothetical protein PROVALCAL_02665 [Providencia alcalifaciens DSM
30120]
gi|212685692|gb|EEB45220.1| hypothetical protein PROVALCAL_02665 [Providencia alcalifaciens DSM
30120]
Length = 226
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 15/198 (7%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDI 216
R + L +E + NVSA RSADA+G+ ++H V D + + + G+ W+ +
Sbjct: 5 RQPDLTLCLEEIHKPHNVSAIVRSADAVGIHNIHAVWPDQHVKLSVSS--AAGSNSWVKV 62
Query: 217 ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLS 276
+ + ++S+G +I T++ A+ ++D++ PT I+VG E G+SD+AL+L+
Sbjct: 63 IPHQSTENAISQIKSQGMQILVTNLSDSAVDFREIDYTQPTCIMVGQEKTGISDKALALA 122
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDLTSEEKQILLAEFS 332
D IPM GMV S NVSVA+ ++++ A R +L G N L+ +E+Q L E
Sbjct: 123 DQHIIIPMVGMVQSLNVSVASALILYEA--QRQRQLAGMYDRENSLLSEQEQQEWLFE-- 178
Query: 333 LRHSKSAISIVHEYAKRK 350
++ E AKRK
Sbjct: 179 -----GGYPVLAEVAKRK 191
>gi|375258005|ref|YP_005017175.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca KCTC
1686]
gi|397660632|ref|YP_006501334.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Klebsiella oxytoca
E718]
gi|402841611|ref|ZP_10890056.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella sp. OBRC7]
gi|423105476|ref|ZP_17093178.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5242]
gi|365907483|gb|AEX02936.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca KCTC
1686]
gi|376380793|gb|EHS93536.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5242]
gi|394348635|gb|AFN34756.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Klebsiella oxytoca
E718]
gi|402282545|gb|EJU31084.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella sp. OBRC7]
Length = 229
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGEAVTHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYRRENSMLPEE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
++Q LL E ++ + AKRK
Sbjct: 182 DQQRLLFE-------GGYPVLAKVAKRK 202
>gi|293417112|ref|ZP_06659739.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B185]
gi|432451908|ref|ZP_19694162.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE193]
gi|433035567|ref|ZP_20223256.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE112]
gi|291431143|gb|EFF04136.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B185]
gi|430977058|gb|ELC93909.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE193]
gi|431546530|gb|ELI20926.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE112]
Length = 229
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVTHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|114564277|ref|YP_751791.1| tRNA guanosine-2'-O-methyltransferase [Shewanella frigidimarina
NCIMB 400]
gi|114335570|gb|ABI72952.1| tRNA guanosine-2'-O-methyltransferase [Shewanella frigidimarina
NCIMB 400]
Length = 233
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ NR + + ++ + N++A RSAD +G+ +H V D R N
Sbjct: 4 ERFARINQMLDNRQVDLTVCLDKVHMTNNIAAVLRSADCVGIHQIHAVWPDDDMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+D E + + ++ TT A+ ++D++ PTAIV+GNE
Sbjct: 63 -TASGSQQWVDTVKHYTFEEAHQAFKKQKMQVLTTTFSDSAVDFREIDYTQPTAIVMGNE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
GVS EA++ +D IPM+GMV S NVSVAA ++M+ A
Sbjct: 122 RDGVSAEAIAAADQHIIIPMRGMVQSLNVSVAAALVMYEA 161
>gi|386853460|ref|YP_006202745.1| SpoU protein [Borrelia garinii BgVir]
gi|365193494|gb|AEW68392.1| SpoU [Borrelia garinii BgVir]
Length = 218
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 6/170 (3%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E LS ++ +++K R V+ R+ + V+E + N SAT R+ + LG+ VH++S
Sbjct: 9 IEVLSEFITDKKKARIEEVLSCRTNYLTFVLEDIFQPQNASATIRTGEILGLSDVHIIS- 67
Query: 195 DSSKRYR--ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR + N V++G+ +W+++ ++ + + L+S GY I T + +I++ D
Sbjct: 68 ---KRNKCTLNPDVTLGSSQWINLNRYNNTKFALDRLKSDGYSIVATSLDEQSINLEDFP 124
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
+ AI G E G+S+EA +DL IPM G S+N+SVA I+M+
Sbjct: 125 INNKMAIFFGTELTGLSEEAFEAADLYLKIPMHGFTQSYNISVAVAIVMY 174
>gi|408670683|ref|YP_006870754.1| spoU protein [Borrelia garinii NMJW1]
gi|407240505|gb|AFT83388.1| spoU protein [Borrelia garinii NMJW1]
Length = 218
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 6/170 (3%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E LS ++ +++K R V+ R+ + V+E + N SAT R+ + LG+ VH++S
Sbjct: 9 IEVLSEFITDKKKARIEEVLSCRTNYLTFVLEDIFQPQNASATIRTGEILGLSDVHIIS- 67
Query: 195 DSSKRYR--ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR + N V++G+ +W+++ ++ + + L+S GY I T + +I++ D
Sbjct: 68 ---KRNKCTLNPDVTLGSSQWINLNRYNNTKFALDRLKSDGYSIVATSLDEQSINLEDFP 124
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
+ AI G E G+S+EA +DL IPM G S+N+SVA I+M+
Sbjct: 125 INNKMAIFFGTELTGLSEEAFEAADLYLKIPMHGFTQSYNISVAVAIVMY 174
>gi|304399040|ref|ZP_07380909.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. aB]
gi|304353500|gb|EFM17878.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. aB]
Length = 221
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDI 216
R + + + +E + NVSA R+ADA+G+ VH V S+R R S G+ W+ +
Sbjct: 5 RQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSQRMRTQASASAGSNSWVKV 62
Query: 217 ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLS 276
+ L+ + ++ TH+ DA+ ++D++ PT I++G E G+++EAL+L+
Sbjct: 63 VTHPTIGDAVKQLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQEKTGITEEALALA 122
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D + IPM GMV S NVSVA ++++ A R
Sbjct: 123 DRQIVIPMVGMVQSLNVSVACALILYEAQRQR 154
>gi|78187117|ref|YP_375160.1| tRNA (guanosine-2'-O-)-methyltransferase [Chlorobium luteolum DSM
273]
gi|78167019|gb|ABB24117.1| tRNA (guanosine-2'-O-)-methyltransferase [Chlorobium luteolum DSM
273]
Length = 219
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 108/196 (55%), Gaps = 6/196 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER + ++++ R + +V++ ++ N+SA RS DA+G+ +H VS S R+
Sbjct: 5 ERFRQIRSMLRRRQPDLTVVMDNVNKPHNLSALIRSCDAVGIHDLHAVSKQRSIHTRQ-- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAISVYDMDWSCPTAIVVGN 263
H + G+ +W + LW +E + LR G ++ A T+V A+ ++D++ PTA+++G
Sbjct: 63 HAAAGSSRWTRLHLWHEIKEPCSALRREGMQLLAATNVAA-AVDFREIDYTLPTAVILGA 121
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEE 323
E GVS EA+ +D + GMV+S NVSVAA +++ A +R L G +L EE
Sbjct: 122 EWDGVSKEAIGEADRTIMVQTHGMVESLNVSVAAAVILFEA--ERQRSLNGMYRELRMEE 179
Query: 324 KQILLAEFSLRHSKSA 339
+Q F L + + A
Sbjct: 180 EQYRRLLFELSYPRLA 195
>gi|189500156|ref|YP_001959626.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeobacteroides
BS1]
gi|189495597|gb|ACE04145.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeobacteroides
BS1]
Length = 216
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER + ++ R + ++++ ++ N+SA RS DA+G+++VH VS K + +
Sbjct: 5 ERFSKIKQLLAYRQPDLTVLMDNVNKPHNLSAIIRSCDAVGIETVHAVS--EEKIIKNRQ 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ KW+++EL + F LR++G ++ H +++ +D++ PTAIV+G E
Sbjct: 63 RAARGSSKWVNLELHETIEHAFACLRAQGMQVLVAHHHEESVDFRTLDYTLPTAIVMGAE 122
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G S LS +D IPM+GMV+S NVSVAA +++ A R
Sbjct: 123 LFGPSATTLSGADHCIHIPMQGMVESLNVSVAAAVILFEAQRQR 166
>gi|343127374|ref|YP_004777305.1| spoU rRNA methylase family protein [Borrelia bissettii DN127]
gi|342222062|gb|AEL18240.1| spoU rRNA Methylase family protein [Borrelia bissettii DN127]
Length = 218
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
++ LS ++ +E+K + V+ R+ + V+E + N SAT R+ + LG+ VHV+
Sbjct: 9 IDVLSRFITDEKKAKIEKVLSIRTNYLTFVLEDICQSQNASATIRTGEILGLSGVHVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
D + ++ N V++G+ +W+++ + + + LRS GY I T + +I++ + +
Sbjct: 67 DKNNKHTLNPDVTLGSSQWINLNKYKNSKFTIDKLRSDGYSIVATSLNEQSINLENFTIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV-CDRATRL 312
A+ G E G+S E L +DL IPM G S+N+SVA I+M+ + C R + +
Sbjct: 127 NKMAVFFGTELTGLSAEVLRAADLYVKIPMYGFTQSYNISVAVAIVMYSLLTCLRKSNI 185
>gi|255534645|ref|YP_003095016.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Flavobacteriaceae
bacterium 3519-10]
gi|255340841|gb|ACU06954.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Flavobacteriaceae
bacterium 3519-10]
Length = 255
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 13/226 (5%)
Query: 117 PYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSA 176
P Y C ++ + + L +L +ER + + S V V+E + F N +A
Sbjct: 27 PNKKHYFCP---MNDQQTFDYLKQFLTDERLAKIEHYAPESSGFVLPVMEDIFQFRNAAA 83
Query: 177 TFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI 236
RS +A G + V+ +S + N V+ GAE W+++E E +++RGY+I
Sbjct: 84 IVRSVEACGFHKI--VAMESENEFNPNLRVTKGAETWVEVEKMPHNLESLTEIKNRGYKI 141
Query: 237 ATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVA 296
+A + D P A+V G E GV++E L +D +IPM G SFNVSVA
Sbjct: 142 LAVSPEKNATMLPDYQLKEPVALVFGTEKEGVTEEILDFADETVAIPMYGFTRSFNVSVA 201
Query: 297 AGILMHHAVCDRATRLVGCNGDLT-SEEKQILLAEFSLRHSKSAIS 341
A I + + +L+ N D SEEK L E +R +K++I+
Sbjct: 202 AAICFY----ELKQKLIRSNIDYKLSEEK---LWEIKVRWAKNSIA 240
>gi|423110959|ref|ZP_17098654.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5243]
gi|423116961|ref|ZP_17104652.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5245]
gi|376376830|gb|EHS89605.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5245]
gi|376377439|gb|EHS90208.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5243]
Length = 229
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVTHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 122 KTGITQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRDNSMLPKE 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
++Q LL E ++ + AKRK
Sbjct: 182 DQQRLLFE-------GGYPVLAKVAKRK 202
>gi|372208626|ref|ZP_09496428.1| tRNA/rRNA methyltransferase SpoU [Flavobacteriaceae bacterium S85]
Length = 225
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 12/226 (5%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
E++ L ++ +ERKE F VV R+ +V+E L N SA RS D G+Q V+
Sbjct: 3 QELLTYLETFVTKERKENFKKVVSQRTRHFAVVLEDLFQKHNWSAVVRSCDVFGIQDVYT 62
Query: 192 VSCDSSKRYRE--NRHVSMGAEKWLDIELWDAPRE----CFNVLRSRGYRIATTHVGMDA 245
+ +YR + V GA+KW++ + + C LR GY+I T +
Sbjct: 63 IE----NKYRAYISNGVGKGAQKWVNFHRFKSQENNTESCVEALRKNGYQIIVTTPHEQS 118
Query: 246 ISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
+ D D + +A V G E GVS+ + +D IPM G +S NVSVAA I + +
Sbjct: 119 SFISDFDITKKSAFVFGVEGTGVSEGLMQKADGFLKIPMVGFTESLNVSVAAAITLQNT- 177
Query: 306 CDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
DR R G + LT E++ L AE+ + S I Y K+
Sbjct: 178 TDRLRR-SGLDWKLTQAEQEQLYAEWIEKSIGSVKQIKERYYADKQ 222
>gi|421844837|ref|ZP_16277993.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|411773700|gb|EKS57228.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|455645439|gb|EMF24499.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii GTC
09479]
Length = 229
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 3 EQRYARIREMLARRQPDLTVCMEEVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTM 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+ ++ + L++RG ++ TH+ A+ ++D++ PT I++G
Sbjct: 61 ASSAAGSNSWVQVKTHLTIGDAVTHLKNRGMQVLATHLSDKAVDFREIDYTRPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTS 321
E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L
Sbjct: 121 EKTGITQEALDLADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYRRENSMLPQ 180
Query: 322 EEKQILLAE 330
+E+Q LL E
Sbjct: 181 DEQQRLLFE 189
>gi|82779142|ref|YP_405491.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae Sd197]
gi|309784368|ref|ZP_07679007.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella dysenteriae
1617]
gi|81243290|gb|ABB64000.1| putative RNA methylase [Shigella dysenteriae Sd197]
gi|308927875|gb|EFP73343.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella dysenteriae
1617]
Length = 229
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQHQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|127514429|ref|YP_001095626.1| tRNA guanosine-2'-O-methyltransferase [Shewanella loihica PV-4]
gi|126639724|gb|ABO25367.1| tRNA guanosine-2'-O-methyltransferase [Shewanella loihica PV-4]
Length = 234
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 93/165 (56%), Gaps = 2/165 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER +R ++ NR + + ++ + N++A R+ADA+G+ +H V D R N
Sbjct: 4 ERFKRINQMLDNRQTDLTVCLDKVHKTNNIAAVIRTADAVGIHQIHAVWPDIEMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ E ++ G +I T+ +A+ D+D++ PT +++GNE
Sbjct: 63 -TASGSQQWVKTIKHYHMDEAAAQFKAAGMQILATNFSENAVDFRDIDYTKPTVVIMGNE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
GVS+E L+++D + IPM GMV S NVSVA+ ++M+ A RA
Sbjct: 122 RDGVSEEGLAIADQQIIIPMIGMVQSLNVSVASALVMYEAQRQRA 166
>gi|16762567|ref|NP_458184.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144056|ref|NP_807398.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213052646|ref|ZP_03345524.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213417916|ref|ZP_03351009.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
gi|213425217|ref|ZP_03357967.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213580806|ref|ZP_03362632.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213647939|ref|ZP_03377992.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|289826480|ref|ZP_06545592.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|378961941|ref|YP_005219427.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|25331661|pir||AF0969 tRNA (guanosine-2'-O-)-methyltransferase (EC 2.1.1.34) - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504872|emb|CAD03250.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139692|gb|AAO71258.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|374355813|gb|AEZ47574.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 229
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIDDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|62182237|ref|YP_218654.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|167549007|ref|ZP_02342766.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168233268|ref|ZP_02658326.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168235358|ref|ZP_02660416.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168241923|ref|ZP_02666855.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168260501|ref|ZP_02682474.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168818425|ref|ZP_02830425.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194444680|ref|YP_002042992.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194448230|ref|YP_002047774.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194469893|ref|ZP_03075877.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194735347|ref|YP_002116686.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|200387615|ref|ZP_03214227.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|207858980|ref|YP_002245631.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224585541|ref|YP_002639340.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238910216|ref|ZP_04654053.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|375116579|ref|ZP_09761749.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|378957401|ref|YP_005214888.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|386593415|ref|YP_006089815.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|409247430|ref|YP_006888129.1| putative RNA methylase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|417329692|ref|ZP_12114476.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|417344697|ref|ZP_12124985.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|417353150|ref|ZP_12130168.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|417368394|ref|ZP_12139955.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417386693|ref|ZP_12151325.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417394308|ref|ZP_12156530.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|417433355|ref|ZP_12161483.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|417514428|ref|ZP_12178237.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|417521417|ref|ZP_12183117.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|418790524|ref|ZP_13346298.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418793395|ref|ZP_13349127.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418799796|ref|ZP_13355461.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418806935|ref|ZP_13362505.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418811097|ref|ZP_13366634.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418814657|ref|ZP_13370170.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418822556|ref|ZP_13377968.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418826305|ref|ZP_13381546.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418829370|ref|ZP_13384351.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418838150|ref|ZP_13393000.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418839446|ref|ZP_13394281.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418843300|ref|ZP_13398098.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418849933|ref|ZP_13404654.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418852728|ref|ZP_13407425.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418858674|ref|ZP_13413287.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418861569|ref|ZP_13416124.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418867861|ref|ZP_13422313.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419728804|ref|ZP_14255767.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419735151|ref|ZP_14262035.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419740619|ref|ZP_14267342.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419743601|ref|ZP_14270266.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419746752|ref|ZP_14273328.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421448570|ref|ZP_15897963.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421569704|ref|ZP_16015405.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421573790|ref|ZP_16019422.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421579226|ref|ZP_16024796.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421582794|ref|ZP_16028326.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|436661315|ref|ZP_20517153.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436803476|ref|ZP_20525906.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|437331882|ref|ZP_20742071.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437344390|ref|ZP_20746298.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437834831|ref|ZP_20845138.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|438141305|ref|ZP_20875026.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|445275134|ref|ZP_21410549.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445325005|ref|ZP_21412466.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|62129870|gb|AAX67573.1| putative tRNA/rRNA methyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|194403343|gb|ACF63565.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406534|gb|ACF66753.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194456257|gb|EDX45096.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194710849|gb|ACF90070.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197291598|gb|EDY30950.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|199604713|gb|EDZ03258.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205325898|gb|EDZ13737.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205332504|gb|EDZ19268.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205339031|gb|EDZ25795.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205344462|gb|EDZ31226.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205350250|gb|EDZ36881.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206710783|emb|CAR35144.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224470069|gb|ACN47899.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|320088164|emb|CBY97926.1| putative RNA methylase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|322716725|gb|EFZ08296.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|353564240|gb|EHC30366.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|353564513|gb|EHC30563.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|353586714|gb|EHC46207.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353602580|gb|EHC57907.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353606028|gb|EHC60380.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353613903|gb|EHC65888.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353633881|gb|EHC80581.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353641504|gb|EHC86223.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|357208012|gb|AET56058.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|357953854|gb|EHJ80252.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|381293751|gb|EIC34892.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381295972|gb|EIC37081.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381298497|gb|EIC39575.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381312086|gb|EIC52896.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381321035|gb|EIC61563.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383800456|gb|AFH47538.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|392757890|gb|EJA14771.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392762978|gb|EJA19788.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392764970|gb|EJA21761.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392780783|gb|EJA37435.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392782093|gb|EJA38731.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392787466|gb|EJA44007.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392794030|gb|EJA50457.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392796661|gb|EJA52991.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392804414|gb|EJA60574.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392807931|gb|EJA63989.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392812627|gb|EJA68610.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392816992|gb|EJA72910.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392819610|gb|EJA75471.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392828462|gb|EJA84155.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392832179|gb|EJA87802.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392838447|gb|EJA94010.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392838924|gb|EJA94472.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|396073224|gb|EJI81530.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|402523197|gb|EJW30516.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402526704|gb|EJW33974.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402526984|gb|EJW34250.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402532690|gb|EJW39879.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|434939763|gb|ELL46531.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434956620|gb|ELL50349.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|435019844|gb|ELM10277.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|435188678|gb|ELN73367.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435190826|gb|ELN75401.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435301001|gb|ELO77058.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|444881818|gb|ELY05827.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444887746|gb|ELY11435.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 229
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|87125562|ref|ZP_01081407.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. RS9917]
gi|86166862|gb|EAQ68124.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. RS9917]
Length = 229
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 6/169 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER +V+ R + ++VE + N+SA RS DA+GV H VS S R R
Sbjct: 3 LLPRRFERLRSVLNRRMADLTVLVEHVEKPHNLSAILRSCDAVGVLEAHAVSL--SGRPR 60
Query: 202 ENRHVSMGAEKWLDIELWDAP--RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
+ G+++W + L D P + L+++G+++ T++G+DA D D++ P A
Sbjct: 61 TFNSTAQGSQRW--VPLRDHPDITAAVHHLKAQGFKLYGTNLGVDARDYRDCDFTGPCAF 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
V+G E G+SD A +L D IPM+GMV S NVSVA L+ A+ R
Sbjct: 119 VLGAEKWGLSDAATALMDQAVFIPMRGMVQSLNVSVATATLLFEALRQR 167
>gi|423122733|ref|ZP_17110417.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5246]
gi|376392014|gb|EHT04681.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5246]
Length = 253
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAIW--PSSRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + + + L+ +G +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRSIDDAVSHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ +AL+L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITRQALALADRDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYKRENSMLPEE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|261823688|ref|YP_003261794.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium wasabiae
WPP163]
gi|261607701|gb|ACX90187.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium wasabiae
WPP163]
gi|385874202|gb|AFI92722.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium sp. SCC3193]
Length = 230
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + NVSA R+ADA+GV VH + S R +
Sbjct: 1 MTPQRYARIKEMLNCRQPDLTICMEQVHKPHNVSAVIRTADAVGVHQVHAIWPTS--RMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ R+ L++ G ++ T++ A+ ++D++ PT I++
Sbjct: 59 TLVSSAAGSNSWVQVKTHRTIRDAVGHLKAEGMQVLATNLSEHAVDFREIDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NG 317
G E G++DEAL L+D IPM GMV S NVSVA+ ++++ A R ++ G +
Sbjct: 119 GQEKTGITDEALKLADRDIIIPMTGMVQSLNVSVASALILYEA--QRQRQIAGMYRREDS 176
Query: 318 DLTSEEKQILLAE 330
L EE+Q LL E
Sbjct: 177 PLDEEEQQRLLFE 189
>gi|415831320|ref|ZP_11517037.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli OK1357]
gi|323182442|gb|EFZ67846.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli OK1357]
Length = 229
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|423198894|ref|ZP_17185477.1| hypothetical protein HMPREF1171_03509 [Aeromonas hydrophila SSU]
gi|404629742|gb|EKB26470.1| hypothetical protein HMPREF1171_03509 [Aeromonas hydrophila SSU]
Length = 231
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 7/181 (3%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++ R + + +E + N++A R+ADA+G+ VH V S R+ + G++
Sbjct: 1 MLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKSWIHKRKG--TARGSQN 58
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
W+D++L L++ G +I TH+ ++ +D++ PTAI+VG E G+ +EA
Sbjct: 59 WVDVKLHPDIGSAVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQEKHGIGEEA 118
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC---NGDLTSEEKQILLA 329
L+L+D IPM GMV S NVSVAA +++ A R L GC L+ EE+ +L
Sbjct: 119 LALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGCYQRGCPLSLEEQNSILF 176
Query: 330 E 330
E
Sbjct: 177 E 177
>gi|423126406|ref|ZP_17114085.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5250]
gi|376397978|gb|EHT10608.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5250]
Length = 229
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E L+ +G +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGEAVTHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRENSMLPEE 181
Query: 323 EKQILLAE 330
++Q LL E
Sbjct: 182 DQQRLLFE 189
>gi|417631092|ref|ZP_12281326.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_MHI813]
gi|433045199|ref|ZP_20232673.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE117]
gi|345370371|gb|EGX02349.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_MHI813]
gi|431552596|gb|ELI26549.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE117]
Length = 229
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|432467978|ref|ZP_19710055.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE205]
gi|432585189|ref|ZP_19821580.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE57]
gi|433074923|ref|ZP_20261560.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE129]
gi|433122278|ref|ZP_20307933.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE157]
gi|433185385|ref|ZP_20369619.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE85]
gi|430990920|gb|ELD07340.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE205]
gi|431115089|gb|ELE18616.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE57]
gi|431583438|gb|ELI55443.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE129]
gi|431638796|gb|ELJ06674.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE157]
gi|431702355|gb|ELJ67155.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE85]
Length = 229
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTISDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|297564557|ref|YP_003683529.1| tRNA guanosine-2'-O-methyltransferase [Meiothermus silvanus DSM
9946]
gi|296849006|gb|ADH62021.1| tRNA guanosine-2'-O-methyltransferase [Meiothermus silvanus DSM
9946]
Length = 228
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC------D 195
+ ER ++ V+ R + +++E + + N SA RS DA+GV H++ +
Sbjct: 1 MTPERWQKIQQVLARRQPDLTVLMERVHKWHNFSAVLRSCDAVGVLEAHLIPAAHGIPTE 60
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC 255
R S A KW+ + + F LRSRG+ I H AI ++D++
Sbjct: 61 DQNPSRHTAATSGSAAKWVGLRTYPDTPSAFADLRSRGFVIYAAHFSHKAIDYREVDYTR 120
Query: 256 PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
PT I++G E GV++EA +L+D IPM GMV S NVSVAA +++ A R
Sbjct: 121 PTCILLGTEKWGVTEEAATLADGHIVIPMMGMVQSLNVSVAAAVILFEAQRQR 173
>gi|256830639|ref|YP_003159367.1| tRNA guanosine-2'-O-methyltransferase [Desulfomicrobium baculatum
DSM 4028]
gi|256579815|gb|ACU90951.1| tRNA guanosine-2'-O-methyltransferase [Desulfomicrobium baculatum
DSM 4028]
Length = 201
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
+L E+RK R +V+ R + LV+ + D NVSA RS DA GV VH+ + +++
Sbjct: 5 FLTEDRKTRLRSVLARRQPDLTLVLNNIHDPHNVSAILRSCDAFGVFGVHLYY--TKEKF 62
Query: 201 RENRHVSMG-AEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
+ S G A+KW+D+ LR RG +I T A + D+D++ PTAI
Sbjct: 63 PSLANSSSGSAKKWIDLTRHREAGPMIQGLRGRGMQIVGTGFSPTARPIMDIDFTRPTAI 122
Query: 260 VVGNENRGV-SDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGD 318
++GNE+RG+ D + + D IPM GMV S NVSVAA +++ A+ R +
Sbjct: 123 ILGNEHRGMDPDVKIHVPD-EIYIPMFGMVQSLNVSVAAATILYEAMRQRLAAGMYDQSP 181
Query: 319 LTSEEKQILLAEFSLR 334
L ++E + + A++ R
Sbjct: 182 LDTDEFEDVYADWCKR 197
>gi|204928623|ref|ZP_03219822.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|452122464|ref|YP_007472712.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|204322056|gb|EDZ07254.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|451911468|gb|AGF83274.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|193070365|ref|ZP_03051307.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E110019]
gi|293413085|ref|ZP_06655753.1| conserved hypothetical protein [Escherichia coli B354]
gi|432676775|ref|ZP_19912219.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE142]
gi|192956304|gb|EDV86765.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E110019]
gi|291468732|gb|EFF11225.1| conserved hypothetical protein [Escherichia coli B354]
gi|431210683|gb|ELF08737.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE142]
Length = 229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITEEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|337287214|ref|YP_004626687.1| tRNA guanosine-2'-O-methyltransferase [Thermodesulfatator indicus
DSM 15286]
gi|335360042|gb|AEH45723.1| tRNA guanosine-2'-O-methyltransferase [Thermodesulfatator indicus
DSM 15286]
Length = 208
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 3/170 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ ER R V++ R + L +E + ++ NVSA R+ADA+GV VH
Sbjct: 6 VIPERLARIKEVLERRQPDLRLFLERVVNYHNVSAILRTADAVGVLHVHYFH---EGELP 62
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
N ++ GA +WL + + +E LR +G+++ T + + I ++D++ PT I+V
Sbjct: 63 INDAITCGAHRWLLLHREEKVKEALTKLRDQGFQLVATGLFPETIDFREVDYTRPTVIIV 122
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
G+E G+S+ L+ IPM GMV S NVSVA GI+++ A R +
Sbjct: 123 GHELEGISETVRELAHAVVKIPMHGMVQSLNVSVATGIILYEAERQRKEK 172
>gi|410612673|ref|ZP_11323749.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola psychrophila
170]
gi|410167786|dbj|GAC37638.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola psychrophila
170]
Length = 229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R + + R S+ L +E L NVSA RS DA+GV VH V + +R++
Sbjct: 4 ERYARIRHFLSQRQPSLTLCLEQLHKPHNVSAIVRSCDAVGVYEVHAV-WNEKPEFRKS- 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+E W+ + + + L+++ ++ T++ +A+ ++D++ PTAI++G E
Sbjct: 62 -TAMGSENWVYTKEHSCIEDAVDHLKTQDMQVLVTNLSENAVDFREIDYTLPTAIILGQE 120
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G + EA++ +D IPM GMV S NVSVAA ++++ A R + LT +
Sbjct: 121 KHGATQEAVAAADQDIIIPMVGMVQSLNVSVAAALILYEAQRQRQQAGMYNTQQLTEQAC 180
Query: 325 QILLAE 330
Q +L E
Sbjct: 181 QKMLFE 186
>gi|260846564|ref|YP_003224342.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O103:H2
str. 12009]
gi|257761711|dbj|BAI33208.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O103:H2
str. 12009]
Length = 229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|26250298|ref|NP_756338.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CFT073]
gi|91213169|ref|YP_543155.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli UTI89]
gi|117625923|ref|YP_859246.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli APEC O1]
gi|157156957|ref|YP_001465132.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E24377A]
gi|218560723|ref|YP_002393636.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli S88]
gi|218691934|ref|YP_002400146.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ED1a]
gi|222158354|ref|YP_002558493.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli LF82]
gi|301028430|ref|ZP_07191676.1| RNA methyltransferase, TrmH family [Escherichia coli MS 196-1]
gi|306816001|ref|ZP_07450139.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NC101]
gi|331644370|ref|ZP_08345499.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H736]
gi|331655284|ref|ZP_08356283.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli M718]
gi|331659987|ref|ZP_08360925.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA206]
gi|386282671|ref|ZP_10060318.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 4_1_40B]
gi|386601685|ref|YP_006103191.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli IHE3034]
gi|386606240|ref|YP_006112540.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli UM146]
gi|386621329|ref|YP_006140909.1| tRNA Guanosine18-2'-O-methyltransferase [Escherichia coli NA114]
gi|386631568|ref|YP_006151288.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. 'clone
D i2']
gi|386636488|ref|YP_006156207.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. 'clone
D i14']
gi|386641277|ref|YP_006108075.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli ABU
83972]
gi|387618951|ref|YP_006121973.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O83:H1 str.
NRG 857C]
gi|387831540|ref|YP_003351477.1| putative RNA methyltransferase [Escherichia coli SE15]
gi|417087540|ref|ZP_11954468.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli cloneA_i1]
gi|417264092|ref|ZP_12051486.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
2.3916]
gi|417273267|ref|ZP_12060614.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
2.4168]
gi|417279248|ref|ZP_12066558.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.2303]
gi|417293608|ref|ZP_12080887.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
B41]
gi|417615243|ref|ZP_12265693.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_EH250]
gi|417620318|ref|ZP_12270721.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli G58-1]
gi|417636623|ref|ZP_12286831.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_S1191]
gi|418305291|ref|ZP_12917085.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli UMNF18]
gi|419144764|ref|ZP_13689491.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6A]
gi|419150391|ref|ZP_13695039.1| spoU rRNA Methylase family protein [Escherichia coli DEC6B]
gi|419156162|ref|ZP_13700717.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6C]
gi|419161506|ref|ZP_13705998.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6D]
gi|419166542|ref|ZP_13710991.1| spoU rRNA Methylase family protein [Escherichia coli DEC6E]
gi|419912105|ref|ZP_14430564.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KD1]
gi|419940012|ref|ZP_14456781.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 75]
gi|419943811|ref|ZP_14460324.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli HM605]
gi|422751505|ref|ZP_16805414.1| SpoU rRNA methylase [Escherichia coli H252]
gi|422756654|ref|ZP_16810476.1| SpoU rRNA methylase [Escherichia coli H263]
gi|422818817|ref|ZP_16867029.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli M919]
gi|423703170|ref|ZP_17677602.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H730]
gi|425117268|ref|ZP_18519045.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 8.0566]
gi|425121998|ref|ZP_18523673.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0569]
gi|425274936|ref|ZP_18666316.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli TW15901]
gi|425285517|ref|ZP_18676530.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli TW00353]
gi|425290859|ref|ZP_18681671.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 3006]
gi|432360114|ref|ZP_19603326.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE4]
gi|432364913|ref|ZP_19608067.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE5]
gi|432383556|ref|ZP_19626481.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE15]
gi|432389464|ref|ZP_19632343.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE16]
gi|432408724|ref|ZP_19651426.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE28]
gi|432413908|ref|ZP_19656561.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE39]
gi|432424060|ref|ZP_19666597.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE178]
gi|432438493|ref|ZP_19680875.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE188]
gi|432443149|ref|ZP_19685483.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE189]
gi|432448292|ref|ZP_19690587.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE191]
gi|432502213|ref|ZP_19743963.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE216]
gi|432516049|ref|ZP_19753264.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE224]
gi|432536062|ref|ZP_19773017.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE234]
gi|432555741|ref|ZP_19792458.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE47]
gi|432560923|ref|ZP_19797576.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE49]
gi|432570917|ref|ZP_19807422.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE53]
gi|432575902|ref|ZP_19812371.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE55]
gi|432594857|ref|ZP_19831168.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE60]
gi|432613663|ref|ZP_19849820.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE72]
gi|432638882|ref|ZP_19874745.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE81]
gi|432648330|ref|ZP_19884115.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE86]
gi|432657895|ref|ZP_19893591.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE93]
gi|432662865|ref|ZP_19898495.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE111]
gi|432687474|ref|ZP_19922762.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE156]
gi|432688924|ref|ZP_19924193.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE161]
gi|432696523|ref|ZP_19931714.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE162]
gi|432701175|ref|ZP_19936319.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE169]
gi|432706392|ref|ZP_19941486.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE171]
gi|432707998|ref|ZP_19943073.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE6]
gi|432725118|ref|ZP_19960031.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE17]
gi|432729726|ref|ZP_19964599.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE18]
gi|432739159|ref|ZP_19973887.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE42]
gi|432743415|ref|ZP_19978129.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE23]
gi|432747635|ref|ZP_19982296.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE43]
gi|432756617|ref|ZP_19991160.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE22]
gi|432846779|ref|ZP_20079382.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE141]
gi|432907361|ref|ZP_20115837.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE194]
gi|432922912|ref|ZP_20125635.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE173]
gi|432929521|ref|ZP_20130571.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE175]
gi|432940467|ref|ZP_20138381.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE183]
gi|432957600|ref|ZP_20149006.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE197]
gi|432973933|ref|ZP_20162776.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE207]
gi|432983102|ref|ZP_20171871.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE211]
gi|432987506|ref|ZP_20176217.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE215]
gi|432992796|ref|ZP_20181434.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE217]
gi|433009862|ref|ZP_20198273.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE229]
gi|433015975|ref|ZP_20204304.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE104]
gi|433025566|ref|ZP_20213534.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE106]
gi|433040668|ref|ZP_20228256.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE113]
gi|433050112|ref|ZP_20237435.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE120]
gi|433060167|ref|ZP_20247198.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE124]
gi|433084587|ref|ZP_20271032.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE133]
gi|433098478|ref|ZP_20284645.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE139]
gi|433103258|ref|ZP_20289327.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE145]
gi|433107916|ref|ZP_20293875.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE148]
gi|433112921|ref|ZP_20298770.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE150]
gi|433117574|ref|ZP_20303353.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE153]
gi|433146297|ref|ZP_20331427.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE168]
gi|433165678|ref|ZP_20350403.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE179]
gi|433170673|ref|ZP_20355289.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE180]
gi|433190466|ref|ZP_20374552.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE88]
gi|433214666|ref|ZP_20398243.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE99]
gi|433321735|ref|ZP_20399293.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli J96]
gi|442595497|ref|ZP_21013343.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442605674|ref|ZP_21020490.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
Nissle 1917]
gi|26110728|gb|AAN82912.1|AE016769_27 tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli CFT073]
gi|91074743|gb|ABE09624.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli UTI89]
gi|115515047|gb|ABJ03122.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli APEC O1]
gi|157078987|gb|ABV18695.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E24377A]
gi|218367492|emb|CAR05274.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli S88]
gi|218429498|emb|CAR10462.2| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli ED1a]
gi|222035359|emb|CAP78104.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli LF82]
gi|281180697|dbj|BAI57027.1| putative RNA methyltransferase [Escherichia coli SE15]
gi|294493140|gb|ADE91896.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli IHE3034]
gi|299878541|gb|EFI86752.1| RNA methyltransferase, TrmH family [Escherichia coli MS 196-1]
gi|305850397|gb|EFM50854.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NC101]
gi|307555769|gb|ADN48544.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli ABU
83972]
gi|307628724|gb|ADN73028.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli UM146]
gi|312948212|gb|ADR29039.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O83:H1 str.
NRG 857C]
gi|323949890|gb|EGB45774.1| SpoU rRNA methylase [Escherichia coli H252]
gi|323954946|gb|EGB50725.1| SpoU rRNA methylase [Escherichia coli H263]
gi|331036664|gb|EGI08890.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H736]
gi|331047299|gb|EGI19377.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli M718]
gi|331053202|gb|EGI25235.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA206]
gi|333971830|gb|AEG38635.1| tRNA Guanosine18-2'-O-methyltransferase [Escherichia coli NA114]
gi|339417389|gb|AEJ59061.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli UMNF18]
gi|345358521|gb|EGW90707.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_EH250]
gi|345370723|gb|EGX02699.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli G58-1]
gi|345385128|gb|EGX14976.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_S1191]
gi|355349640|gb|EHF98843.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli cloneA_i1]
gi|355422467|gb|AER86664.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. 'clone
D i2']
gi|355427387|gb|AER91583.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. 'clone
D i14']
gi|377989194|gb|EHV52362.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6A]
gi|377989682|gb|EHV52848.1| spoU rRNA Methylase family protein [Escherichia coli DEC6B]
gi|377993231|gb|EHV56369.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6C]
gi|378004205|gb|EHV67233.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6D]
gi|378006766|gb|EHV69739.1| spoU rRNA Methylase family protein [Escherichia coli DEC6E]
gi|385537620|gb|EIF84490.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli M919]
gi|385708727|gb|EIG45732.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H730]
gi|386120294|gb|EIG68924.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 4_1_40B]
gi|386221801|gb|EII44230.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
2.3916]
gi|386234444|gb|EII66422.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
2.4168]
gi|386238025|gb|EII74965.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.2303]
gi|386251796|gb|EIJ01488.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
B41]
gi|388392204|gb|EIL53631.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KD1]
gi|388404774|gb|EIL65221.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 75]
gi|388420008|gb|EIL79713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli HM605]
gi|408189852|gb|EKI15546.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli TW15901]
gi|408198186|gb|EKI23429.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli TW00353]
gi|408209280|gb|EKI33881.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 3006]
gi|408563648|gb|EKK39779.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 8.0566]
gi|408564743|gb|EKK40844.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0569]
gi|430873248|gb|ELB96823.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE4]
gi|430883203|gb|ELC06207.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE5]
gi|430903455|gb|ELC25192.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE16]
gi|430903941|gb|ELC25677.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE15]
gi|430926098|gb|ELC46686.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE28]
gi|430932934|gb|ELC53352.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE39]
gi|430941688|gb|ELC61830.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE178]
gi|430960515|gb|ELC78670.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE188]
gi|430963352|gb|ELC80939.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE189]
gi|430970677|gb|ELC87722.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE191]
gi|431025881|gb|ELD38967.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE216]
gi|431038744|gb|ELD49640.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE224]
gi|431057435|gb|ELD66878.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE234]
gi|431080864|gb|ELD87650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE47]
gi|431088418|gb|ELD94296.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE49]
gi|431097083|gb|ELE02532.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE53]
gi|431104675|gb|ELE09048.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE55]
gi|431125758|gb|ELE28155.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE60]
gi|431146685|gb|ELE48121.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE72]
gi|431168358|gb|ELE68604.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE81]
gi|431178303|gb|ELE78216.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE86]
gi|431188006|gb|ELE87505.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE93]
gi|431196800|gb|ELE95705.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE111]
gi|431219125|gb|ELF16543.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE156]
gi|431231167|gb|ELF26935.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE162]
gi|431235646|gb|ELF30895.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE161]
gi|431240286|gb|ELF34748.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE169]
gi|431240582|gb|ELF35033.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE171]
gi|431254952|gb|ELF48213.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE6]
gi|431262337|gb|ELF54327.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE17]
gi|431270867|gb|ELF62010.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE18]
gi|431279259|gb|ELF70227.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE42]
gi|431281572|gb|ELF72475.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE23]
gi|431289535|gb|ELF80276.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE43]
gi|431299505|gb|ELF89076.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE22]
gi|431392312|gb|ELG75911.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE141]
gi|431428327|gb|ELH10269.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE194]
gi|431434832|gb|ELH16446.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE173]
gi|431440929|gb|ELH22257.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE175]
gi|431460361|gb|ELH40650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE183]
gi|431463478|gb|ELH43668.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE197]
gi|431479280|gb|ELH59023.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE207]
gi|431488860|gb|ELH68490.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE211]
gi|431490551|gb|ELH70161.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE217]
gi|431494264|gb|ELH73853.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE215]
gi|431521244|gb|ELH98492.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE229]
gi|431526543|gb|ELI03291.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE104]
gi|431530951|gb|ELI07626.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE106]
gi|431548505|gb|ELI22786.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE113]
gi|431561959|gb|ELI35295.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE120]
gi|431565772|gb|ELI38847.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE124]
gi|431597991|gb|ELI67892.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE133]
gi|431612478|gb|ELI81725.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE139]
gi|431616021|gb|ELI85089.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE145]
gi|431623814|gb|ELI92440.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE148]
gi|431624817|gb|ELI93413.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE150]
gi|431630534|gb|ELI98863.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE153]
gi|431657482|gb|ELJ24446.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE168]
gi|431683574|gb|ELJ49203.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE179]
gi|431683998|gb|ELJ49619.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE180]
gi|431702106|gb|ELJ66907.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE88]
gi|431731824|gb|ELJ95286.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE99]
gi|432349538|gb|ELL43965.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli J96]
gi|441604346|emb|CCP98477.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441713356|emb|CCQ06467.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
Nissle 1917]
Length = 229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|415838602|ref|ZP_11520571.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli RN587/1]
gi|417281817|ref|ZP_12069117.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3003]
gi|323189442|gb|EFZ74723.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli RN587/1]
gi|386246146|gb|EII87876.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3003]
Length = 229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPETE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|225552193|ref|ZP_03773133.1| tRNA/rRNA methyltransferase [Borrelia sp. SV1]
gi|225371191|gb|EEH00621.1| tRNA/rRNA methyltransferase [Borrelia sp. SV1]
Length = 218
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+ LS ++ +E+K R V+ R+ + V+E + N SAT R+ + LG+ VHV+
Sbjct: 9 ISVLSKFITDEKKARIEKVLSFRTNYLTFVLEDIFQSQNASATIRTGEILGLSDVHVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ ++ N V++G+ +W+++ + + + L+S GY I T + +I++ ++ +
Sbjct: 67 EKKNKHTLNPDVTLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLNPKSINLENLTIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
AI G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAIFFGTELTGLSAEVLGAADLYVKIPMYGFTQSYNISVAVAIVMY 174
>gi|51598313|ref|YP_072501.1| spoU protein [Borrelia garinii PBi]
gi|51572884|gb|AAU06909.1| spoU protein [Borrelia garinii PBi]
Length = 218
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E LS ++ +++K R V+ R+ + V+E + N SAT R+ + LG VH++S
Sbjct: 9 IEVLSEFITDKKKARIEEVLSRRTNYLTFVLEDIFQPQNASATIRTGEILGFSDVHIIS- 67
Query: 195 DSSKRYR--ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR + N V++G+ +W+++ ++ + + L+S GY I T + +I++ D
Sbjct: 68 ---KRNKCTLNPDVTLGSSQWINLNRYNNTKFALDRLKSDGYSIVATSLDEQSINLEDFP 124
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
+ A+ G E G+S EA +DL IPM G S+N+SVA I+M+
Sbjct: 125 INNKMAVFFGTELTGLSAEAFEAADLYLKIPMHGFTQSYNISVAVAIVMY 174
>gi|146309755|ref|YP_001174829.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter sp. 638]
gi|145316631|gb|ABP58778.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter sp. 638]
Length = 229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVW--PGNRLRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E L++ G +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVTVKTHPTISEAVAQLKASGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYERKNSMLPEE 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|219684874|ref|ZP_03539816.1| tRNA/rRNA methyltransferase [Borrelia garinii PBr]
gi|219671819|gb|EED28874.1| tRNA/rRNA methyltransferase [Borrelia garinii PBr]
Length = 218
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 6/170 (3%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E LS ++ +++K R V+ R+ + V+E + N SAT R+ + LG+ VH++S
Sbjct: 9 IEVLSEFITDKKKARIEEVLSRRTNYLTFVLEDIFQPQNASATIRTGEILGLSDVHIIS- 67
Query: 195 DSSKRYR--ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR + N V++G+ +W+++ ++ + + L+S GY I T + +I++ D
Sbjct: 68 ---KRNKCTLNPDVTLGSSQWINLNRYNNTKFALDRLKSDGYSIVATSLDEQSINLEDFP 124
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
+ A+ G E G+S EA +DL IPM G S+N+SVA I+M+
Sbjct: 125 INNKMAVFFGTELTGLSAEAFEAADLYLKIPMYGFTQSYNISVAVAIVMY 174
>gi|254480165|ref|ZP_05093413.1| RNA methyltransferase, TrmH family [marine gamma proteobacterium
HTCC2148]
gi|214039727|gb|EEB80386.1| RNA methyltransferase, TrmH family [marine gamma proteobacterium
HTCC2148]
Length = 215
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
N+SA R+ DA+G+Q +H V ++ Y+ R +MG+ W+D++ P + L++
Sbjct: 11 NLSAIVRNCDAVGIQRMHAVI--GTEDYKTFRGTAMGSHHWVDVDTHQNPAVALDALKAS 68
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
GY++ H A +D++ PT I++G E RGVS AL D +IPM GMV+S+N
Sbjct: 69 GYQLVAAHFDEQAADYRQVDYTLPTGILMGAERRGVSAIALERVDRCITIPMVGMVESYN 128
Query: 293 VSVAAGILMHHA 304
VSVAAGI++ A
Sbjct: 129 VSVAAGIILAEA 140
>gi|390559815|ref|ZP_10244098.1| tRNA guanosine-2'-O-methyltransferase [Nitrolancetus hollandicus
Lb]
gi|390173615|emb|CCF83397.1| tRNA guanosine-2'-O-methyltransferase [Nitrolancetus hollandicus
Lb]
Length = 190
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Query: 150 FVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMG 209
++V++ R + +V+E + D NVSA RS +A+G+ VH+V + +R +R S
Sbjct: 1 MIDVLERRQPDLTVVIEDVHDPHNVSAVLRSCEAVGIPVVHLVYT-TEERPSLSRLSSAS 59
Query: 210 AEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVS 269
A KWLD+ + LR +G+ I TH DA +Y +D + P A+V GNE RGVS
Sbjct: 60 AVKWLDVRFHRDIDAAYAELRRQGFTIYATHFDPDAGDLYSLDLTGPVALVFGNEQRGVS 119
Query: 270 DEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++A +D IPM GMV S N+SVA + ++ A+ R
Sbjct: 120 EDARQGADGGLVIPMMGMVRSLNISVACAVSLYEALRQR 158
>gi|15804192|ref|NP_290231.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EDL933]
gi|15833780|ref|NP_312553.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. Sakai]
gi|16131522|ref|NP_418108.1| tRNA mG18-2'-O-methyltransferase, SAM-dependen [Escherichia coli
str. K-12 substr. MG1655]
gi|24114921|ref|NP_709431.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2a str.
301]
gi|30065073|ref|NP_839244.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2a str.
2457T]
gi|74314114|ref|YP_312533.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei Ss046]
gi|82546080|ref|YP_410027.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii Sb227]
gi|110807671|ref|YP_691191.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 5 str.
8401]
gi|157163132|ref|YP_001460450.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli HS]
gi|168748698|ref|ZP_02773720.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4113]
gi|168753476|ref|ZP_02778483.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4401]
gi|168759772|ref|ZP_02784779.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4501]
gi|168766072|ref|ZP_02791079.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4486]
gi|168772380|ref|ZP_02797387.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4196]
gi|168779807|ref|ZP_02804814.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4076]
gi|168785528|ref|ZP_02810535.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC869]
gi|168798621|ref|ZP_02823628.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC508]
gi|170018119|ref|YP_001723073.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ATCC 8739]
gi|170083158|ref|YP_001732478.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. K-12
substr. DH10B]
gi|188495946|ref|ZP_03003216.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 53638]
gi|191167826|ref|ZP_03029632.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B7A]
gi|193063862|ref|ZP_03044949.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E22]
gi|194430057|ref|ZP_03062562.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B171]
gi|194435953|ref|ZP_03068056.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 101-1]
gi|195936212|ref|ZP_03081594.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4024]
gi|208806132|ref|ZP_03248469.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4206]
gi|208812795|ref|ZP_03254124.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4045]
gi|208819105|ref|ZP_03259425.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4042]
gi|209398863|ref|YP_002273131.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4115]
gi|209921124|ref|YP_002295208.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SE11]
gi|217324129|ref|ZP_03440213.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. TW14588]
gi|218551178|ref|YP_002384969.1| tRNA guanosine-2'-O-methyltransferase [Escherichia fergusonii ATCC
35469]
gi|218556214|ref|YP_002389127.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli IAI1]
gi|238902742|ref|YP_002928538.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli BW2952]
gi|251786902|ref|YP_003001206.1| tRNA (Gm18) 2'-O-methyltransferase [Escherichia coli BL21(DE3)]
gi|253771507|ref|YP_003034338.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163579|ref|YP_003046687.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B str.
REL606]
gi|254290329|ref|YP_003056077.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli
BL21(DE3)]
gi|254795606|ref|YP_003080443.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. TW14359]
gi|260857954|ref|YP_003231845.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. 11368]
gi|260870381|ref|YP_003236783.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O111:H-
str. 11128]
gi|261224166|ref|ZP_05938447.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O157:H7
str. FRIK2000]
gi|261254776|ref|ZP_05947309.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O157:H7
str. FRIK966]
gi|291285022|ref|YP_003501840.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|293463975|ref|ZP_06664389.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B088]
gi|312972063|ref|ZP_07786237.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 1827-70]
gi|331670492|ref|ZP_08371331.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA271]
gi|331679743|ref|ZP_08380413.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H591]
gi|383180829|ref|YP_005458834.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 53G]
gi|384545227|ref|YP_005729291.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2002017]
gi|386593641|ref|YP_006090041.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DH1]
gi|386616471|ref|YP_006136137.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli UMNK88]
gi|386706921|ref|YP_006170768.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli P12b]
gi|387509057|ref|YP_006161313.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|387614317|ref|YP_006117433.1| tRNA (guanosine-2'-O)-methyltransferase [Escherichia coli ETEC
H10407]
gi|387623309|ref|YP_006130937.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DH1]
gi|387884828|ref|YP_006315130.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli Xuzhou21]
gi|388479589|ref|YP_491783.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli str.
K-12 substr. W3110]
gi|404377046|ref|ZP_10982188.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 1_1_43]
gi|415785790|ref|ZP_11493141.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli EPECa14]
gi|415810885|ref|ZP_11503235.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli LT-68]
gi|415821695|ref|ZP_11510476.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli OK1180]
gi|415847827|ref|ZP_11525941.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella sonnei 53G]
gi|416259644|ref|ZP_11640020.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae CDC
74-1112]
gi|416297416|ref|ZP_11651674.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri CDC
796-83]
gi|416315688|ref|ZP_11659501.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. 1044]
gi|416319940|ref|ZP_11662492.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC1212]
gi|416330131|ref|ZP_11669168.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. 1125]
gi|416342072|ref|ZP_11676438.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4100B]
gi|416778382|ref|ZP_11875883.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. G5101]
gi|416789680|ref|ZP_11880728.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H-
str. 493-89]
gi|416801567|ref|ZP_11885668.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H-
str. H 2687]
gi|416812422|ref|ZP_11890586.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
3256-97]
gi|416822696|ref|ZP_11895100.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
USDA 5905]
gi|416833126|ref|ZP_11900198.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. LSU-61]
gi|417133450|ref|ZP_11978235.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
5.0588]
gi|417157483|ref|ZP_11995107.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
96.0497]
gi|417165327|ref|ZP_11999389.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
99.0741]
gi|417173870|ref|ZP_12003666.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.2608]
gi|417185586|ref|ZP_12010987.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
93.0624]
gi|417201992|ref|ZP_12018242.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
4.0522]
gi|417209930|ref|ZP_12021032.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
JB1-95]
gi|417220734|ref|ZP_12024174.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
96.154]
gi|417227628|ref|ZP_12029386.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
5.0959]
gi|417236322|ref|ZP_12034872.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
9.0111]
gi|417249616|ref|ZP_12041400.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
4.0967]
gi|417267022|ref|ZP_12054383.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.3884]
gi|417296353|ref|ZP_12083600.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
900105 (10e)]
gi|417594111|ref|ZP_12244797.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 2534-86]
gi|417604554|ref|ZP_12255117.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_94C]
gi|417610345|ref|ZP_12260838.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_DG131-3]
gi|417625766|ref|ZP_12276056.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_H.1.8]
gi|417641594|ref|ZP_12291720.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli TX1999]
gi|417669152|ref|ZP_12318690.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_O31]
gi|417709897|ref|ZP_12358911.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri VA-6]
gi|417714847|ref|ZP_12363796.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-272]
gi|417725595|ref|ZP_12374376.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-304]
gi|417736005|ref|ZP_12384640.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri
2747-71]
gi|417830232|ref|ZP_12476768.1| spoU rRNA Methylase family protein [Shigella flexneri J1713]
gi|418259818|ref|ZP_12882465.1| spoU rRNA Methylase family protein [Shigella flexneri 6603-63]
gi|418269303|ref|ZP_12887782.1| spoU rRNA Methylase family protein [Shigella sonnei str. Moseley]
gi|418944915|ref|ZP_13497885.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H43
str. T22]
gi|418955941|ref|ZP_13507874.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli J53]
gi|419047579|ref|ZP_13594510.1| spoU rRNA Methylase family protein [Escherichia coli DEC3A]
gi|419059419|ref|ZP_13606219.1| spoU rRNA Methylase family protein [Escherichia coli DEC3C]
gi|419064964|ref|ZP_13611683.1| spoU rRNA Methylase family protein [Escherichia coli DEC3D]
gi|419071926|ref|ZP_13617531.1| spoU rRNA Methylase family protein [Escherichia coli DEC3E]
gi|419077735|ref|ZP_13623235.1| spoU rRNA Methylase family protein [Escherichia coli DEC3F]
gi|419082897|ref|ZP_13628340.1| spoU rRNA Methylase family protein [Escherichia coli DEC4A]
gi|419088772|ref|ZP_13634123.1| spoU rRNA Methylase family protein [Escherichia coli DEC4B]
gi|419094863|ref|ZP_13640138.1| spoU rRNA Methylase family protein [Escherichia coli DEC4C]
gi|419100574|ref|ZP_13645761.1| spoU rRNA Methylase family protein [Escherichia coli DEC4D]
gi|419106311|ref|ZP_13651432.1| spoU rRNA Methylase family protein [Escherichia coli DEC4E]
gi|419111692|ref|ZP_13656743.1| spoU rRNA Methylase family protein [Escherichia coli DEC4F]
gi|419113662|ref|ZP_13658695.1| spoU rRNA Methylase family protein [Escherichia coli DEC5A]
gi|419122975|ref|ZP_13667915.1| spoU rRNA Methylase family protein [Escherichia coli DEC5B]
gi|419128404|ref|ZP_13673274.1| spoU rRNA Methylase family protein [Escherichia coli DEC5C]
gi|419172531|ref|ZP_13716405.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC7A]
gi|419177337|ref|ZP_13721145.1| spoU rRNA Methylase family protein [Escherichia coli DEC7B]
gi|419183094|ref|ZP_13726702.1| spoU rRNA Methylase family protein [Escherichia coli DEC7C]
gi|419188710|ref|ZP_13732214.1| spoU rRNA Methylase family protein [Escherichia coli DEC7D]
gi|419194093|ref|ZP_13737530.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC7E]
gi|419199422|ref|ZP_13742711.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC8A]
gi|419205855|ref|ZP_13749010.1| spoU rRNA Methylase family protein [Escherichia coli DEC8B]
gi|419212149|ref|ZP_13755212.1| spoU rRNA Methylase family protein [Escherichia coli DEC8C]
gi|419223833|ref|ZP_13766743.1| spoU rRNA Methylase family protein [Escherichia coli DEC8E]
gi|419229441|ref|ZP_13772275.1| spoU rRNA Methylase family protein [Escherichia coli DEC9A]
gi|419234913|ref|ZP_13777677.1| spoU rRNA Methylase family protein [Escherichia coli DEC9B]
gi|419240307|ref|ZP_13783009.1| spoU rRNA Methylase family protein [Escherichia coli DEC9C]
gi|419245745|ref|ZP_13788375.1| spoU rRNA Methylase family protein [Escherichia coli DEC9D]
gi|419251668|ref|ZP_13794232.1| spoU rRNA Methylase family protein [Escherichia coli DEC9E]
gi|419257579|ref|ZP_13800074.1| spoU rRNA Methylase family protein [Escherichia coli DEC10A]
gi|419263704|ref|ZP_13806107.1| spoU rRNA Methylase family protein [Escherichia coli DEC10B]
gi|419269859|ref|ZP_13812199.1| spoU rRNA Methylase family protein [Escherichia coli DEC10C]
gi|419275098|ref|ZP_13817383.1| spoU rRNA Methylase family protein [Escherichia coli DEC10D]
gi|419286786|ref|ZP_13828944.1| spoU rRNA Methylase family protein [Escherichia coli DEC10F]
gi|419291872|ref|ZP_13833955.1| spoU rRNA Methylase family protein [Escherichia coli DEC11A]
gi|419297153|ref|ZP_13839188.1| spoU rRNA Methylase family protein [Escherichia coli DEC11B]
gi|419302746|ref|ZP_13844737.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11C]
gi|419308687|ref|ZP_13850576.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11D]
gi|419313708|ref|ZP_13855566.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11E]
gi|419319151|ref|ZP_13860946.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC12A]
gi|419325519|ref|ZP_13867200.1| spoU rRNA Methylase family protein [Escherichia coli DEC12B]
gi|419331363|ref|ZP_13872955.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC12C]
gi|419336959|ref|ZP_13878469.1| spoU rRNA Methylase family protein [Escherichia coli DEC12D]
gi|419342242|ref|ZP_13883695.1| spoU rRNA Methylase family protein [Escherichia coli DEC12E]
gi|419347431|ref|ZP_13888798.1| spoU rRNA Methylase family protein [Escherichia coli DEC13A]
gi|419351892|ref|ZP_13893219.1| spoU rRNA Methylase family protein [Escherichia coli DEC13B]
gi|419357359|ref|ZP_13898605.1| spoU rRNA Methylase family protein [Escherichia coli DEC13C]
gi|419362335|ref|ZP_13903541.1| spoU rRNA Methylase family protein [Escherichia coli DEC13D]
gi|419367190|ref|ZP_13908339.1| spoU rRNA Methylase family protein [Escherichia coli DEC13E]
gi|419372256|ref|ZP_13913365.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC14A]
gi|419394111|ref|ZP_13934906.1| spoU rRNA Methylase family protein [Escherichia coli DEC15A]
gi|419398929|ref|ZP_13939691.1| spoU rRNA Methylase family protein [Escherichia coli DEC15B]
gi|419404204|ref|ZP_13944921.1| spoU rRNA Methylase family protein [Escherichia coli DEC15C]
gi|419409366|ref|ZP_13950049.1| spoU rRNA Methylase family protein [Escherichia coli DEC15D]
gi|419414918|ref|ZP_13955551.1| spoU rRNA Methylase family protein [Escherichia coli DEC15E]
gi|419702490|ref|ZP_14230083.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SCI-07]
gi|419810714|ref|ZP_14335593.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O32:H37
str. P4]
gi|419867078|ref|ZP_14389416.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O103:H25
str. CVM9340]
gi|419872349|ref|ZP_14394386.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O103:H2
str. CVM9450]
gi|419877549|ref|ZP_14399108.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9534]
gi|419883317|ref|ZP_14404438.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9545]
gi|419890056|ref|ZP_14410364.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9570]
gi|419898354|ref|ZP_14417914.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9574]
gi|419903545|ref|ZP_14422604.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM9942]
gi|419907346|ref|ZP_14426180.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10026]
gi|419924751|ref|ZP_14442625.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 541-15]
gi|419949629|ref|ZP_14465868.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CUMT8]
gi|420087523|ref|ZP_14599482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9602]
gi|420097286|ref|ZP_14608589.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9634]
gi|420103493|ref|ZP_14614351.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9455]
gi|420110213|ref|ZP_14620235.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9553]
gi|420113775|ref|ZP_14623485.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10021]
gi|420120504|ref|ZP_14629713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10030]
gi|420127056|ref|ZP_14635736.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10224]
gi|420133936|ref|ZP_14642095.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM9952]
gi|420271982|ref|ZP_14774332.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA22]
gi|420277727|ref|ZP_14780006.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA40]
gi|420282563|ref|ZP_14784795.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW06591]
gi|420294093|ref|ZP_14796207.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW11039]
gi|420300697|ref|ZP_14802740.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09109]
gi|420306566|ref|ZP_14808554.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW10119]
gi|420311487|ref|ZP_14813416.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1738]
gi|420317660|ref|ZP_14819529.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1734]
gi|420322862|ref|ZP_14824679.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2850-71]
gi|420327956|ref|ZP_14829694.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri CCH060]
gi|420333782|ref|ZP_14835414.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-1770]
gi|420344240|ref|ZP_14845697.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-404]
gi|420355206|ref|ZP_14856279.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii 4444-74]
gi|420361016|ref|ZP_14861964.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 3226-85]
gi|420365619|ref|ZP_14866482.1| spoU rRNA Methylase family protein [Shigella sonnei 4822-66]
gi|420376948|ref|ZP_14876632.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 1235-66]
gi|420382916|ref|ZP_14882341.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae 225-75]
gi|420387954|ref|ZP_14887287.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EPECa12]
gi|421777558|ref|ZP_16214152.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli AD30]
gi|421814640|ref|ZP_16250341.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0416]
gi|421826530|ref|ZP_16261883.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK920]
gi|421827616|ref|ZP_16262954.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA7]
gi|422764176|ref|ZP_16817928.1| SpoU rRNA methylase [Escherichia coli E1167]
gi|422768559|ref|ZP_16822283.1| SpoU rRNA methylase [Escherichia coli E1520]
gi|422773216|ref|ZP_16826901.1| SpoU rRNA methylase [Escherichia coli E482]
gi|422778219|ref|ZP_16831869.1| SpoU rRNA methylase [Escherichia coli H120]
gi|422783755|ref|ZP_16836538.1| SpoU rRNA methylase [Escherichia coli TW10509]
gi|422788496|ref|ZP_16841232.1| SpoU rRNA methylase [Escherichia coli H489]
gi|422792242|ref|ZP_16844943.1| SpoU rRNA methylase [Escherichia coli TA007]
gi|422807700|ref|ZP_16856129.1| SpoU rRNA methylase [Escherichia fergusonii B253]
gi|422961914|ref|ZP_16972650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H494]
gi|423707966|ref|ZP_17682346.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B799]
gi|423727709|ref|ZP_17701573.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA31]
gi|424079910|ref|ZP_17816865.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA505]
gi|424086313|ref|ZP_17822794.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA517]
gi|424092721|ref|ZP_17828643.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1996]
gi|424099398|ref|ZP_17834660.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1985]
gi|424105601|ref|ZP_17840334.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1990]
gi|424112247|ref|ZP_17846469.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93-001]
gi|424124379|ref|ZP_17857675.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA5]
gi|424130545|ref|ZP_17863442.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA9]
gi|424136854|ref|ZP_17869290.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA10]
gi|424143407|ref|ZP_17875260.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA14]
gi|424149795|ref|ZP_17881161.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA15]
gi|424155681|ref|ZP_17886573.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA24]
gi|424255914|ref|ZP_17892119.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA25]
gi|424334952|ref|ZP_17898053.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA28]
gi|424452092|ref|ZP_17903748.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA32]
gi|424458275|ref|ZP_17909374.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA33]
gi|424464786|ref|ZP_17915130.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA39]
gi|424471047|ref|ZP_17920845.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA41]
gi|424477542|ref|ZP_17926849.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA42]
gi|424483329|ref|ZP_17932299.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW07945]
gi|424489511|ref|ZP_17938048.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09098]
gi|424496198|ref|ZP_17943758.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09195]
gi|424502836|ref|ZP_17949715.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4203]
gi|424509099|ref|ZP_17955467.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4196]
gi|424516489|ref|ZP_17961092.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW14313]
gi|424522638|ref|ZP_17966740.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW14301]
gi|424540719|ref|ZP_17983653.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4013]
gi|424546871|ref|ZP_17989216.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4402]
gi|424553078|ref|ZP_17994906.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4439]
gi|424559279|ref|ZP_18000674.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4436]
gi|424565613|ref|ZP_18006606.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4437]
gi|424571729|ref|ZP_18012264.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4448]
gi|424749792|ref|ZP_18177871.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CFSAN001629]
gi|424760097|ref|ZP_18187743.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CFSAN001630]
gi|424773495|ref|ZP_18200555.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CFSAN001632]
gi|424818437|ref|ZP_18243588.1| tRNA guanosine-2'-O-methyltransferase [Escherichia fergusonii
ECD227]
gi|424840044|ref|ZP_18264681.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 5a str.
M90T]
gi|425106474|ref|ZP_18508780.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5.2239]
gi|425134176|ref|ZP_18535016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.2524]
gi|425140768|ref|ZP_18541139.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0833]
gi|425146439|ref|ZP_18546420.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0869]
gi|425188921|ref|ZP_18586182.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1997]
gi|425195655|ref|ZP_18592415.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE1487]
gi|425214268|ref|ZP_18609659.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA4]
gi|425220395|ref|ZP_18615347.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA23]
gi|425227034|ref|ZP_18621491.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA49]
gi|425233198|ref|ZP_18627227.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA45]
gi|425239121|ref|ZP_18632831.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TT12B]
gi|425245353|ref|ZP_18638650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli MA6]
gi|425251550|ref|ZP_18644482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5905]
gi|425263600|ref|ZP_18655585.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC96038]
gi|425269587|ref|ZP_18661206.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5412]
gi|425297053|ref|ZP_18687194.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA38]
gi|425307457|ref|ZP_18697126.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli N1]
gi|425313754|ref|ZP_18702919.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1735]
gi|425319735|ref|ZP_18708511.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1736]
gi|425325852|ref|ZP_18714188.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1737]
gi|425332176|ref|ZP_18719997.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1846]
gi|425338352|ref|ZP_18725694.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1847]
gi|425350503|ref|ZP_18736958.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1849]
gi|425356775|ref|ZP_18742831.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1850]
gi|425362734|ref|ZP_18748370.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1856]
gi|425368973|ref|ZP_18754068.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1862]
gi|425375294|ref|ZP_18759923.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1864]
gi|425381971|ref|ZP_18765955.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1865]
gi|425394875|ref|ZP_18777972.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1868]
gi|425407061|ref|ZP_18789271.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1870]
gi|425413423|ref|ZP_18795175.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE098]
gi|425419734|ref|ZP_18800994.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK523]
gi|425424663|ref|ZP_18805811.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 0.1288]
gi|425431034|ref|ZP_18811632.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 0.1304]
gi|427806849|ref|ZP_18973916.1| putative RNA methylase [Escherichia coli chi7122]
gi|427811435|ref|ZP_18978500.1| putative RNA methylase [Escherichia coli]
gi|428949445|ref|ZP_19021707.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.1467]
gi|428955515|ref|ZP_19027297.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.1042]
gi|428968123|ref|ZP_19038824.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.0091]
gi|428980282|ref|ZP_19050086.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.2281]
gi|428986058|ref|ZP_19055439.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93.0055]
gi|428992230|ref|ZP_19061208.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93.0056]
gi|428998122|ref|ZP_19066704.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 94.0618]
gi|429004475|ref|ZP_19072551.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0183]
gi|429010487|ref|ZP_19077916.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.1288]
gi|429017008|ref|ZP_19083879.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0943]
gi|429022841|ref|ZP_19089347.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0428]
gi|429028922|ref|ZP_19094898.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0427]
gi|429046974|ref|ZP_19111676.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0107]
gi|429052382|ref|ZP_19116941.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0003]
gi|429057919|ref|ZP_19122177.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.1742]
gi|429069628|ref|ZP_19133068.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0672]
gi|429080636|ref|ZP_19143764.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0713]
gi|432367138|ref|ZP_19610252.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE10]
gi|432378828|ref|ZP_19621809.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE12]
gi|432419185|ref|ZP_19661776.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE44]
gi|432528496|ref|ZP_19765568.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE233]
gi|432577929|ref|ZP_19814375.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE56]
gi|432629286|ref|ZP_19865251.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE77]
gi|432672759|ref|ZP_19908277.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE119]
gi|432720798|ref|ZP_19955759.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE9]
gi|432794903|ref|ZP_20028981.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE78]
gi|432796420|ref|ZP_20030457.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE79]
gi|432811402|ref|ZP_20045258.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE101]
gi|432836599|ref|ZP_20070129.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE136]
gi|432878018|ref|ZP_20095467.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE154]
gi|432965415|ref|ZP_20154338.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE203]
gi|433094053|ref|ZP_20280301.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE138]
gi|433132238|ref|ZP_20317659.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE163]
gi|433136913|ref|ZP_20322236.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE166]
gi|433200423|ref|ZP_20384305.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE94]
gi|442600184|ref|ZP_21017876.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443619724|ref|YP_007383580.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli APEC O78]
gi|444932944|ref|ZP_21251958.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0814]
gi|444938422|ref|ZP_21257162.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0815]
gi|444944014|ref|ZP_21262503.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0816]
gi|444949435|ref|ZP_21267729.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0839]
gi|444955153|ref|ZP_21273222.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0848]
gi|444960539|ref|ZP_21278365.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1753]
gi|444965736|ref|ZP_21283301.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1775]
gi|444971772|ref|ZP_21289114.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1793]
gi|444982419|ref|ZP_21299319.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ATCC
700728]
gi|444998392|ref|ZP_21314883.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA13]
gi|445003937|ref|ZP_21320318.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA2]
gi|445009293|ref|ZP_21325524.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA47]
gi|445014425|ref|ZP_21330522.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA48]
gi|445025708|ref|ZP_21341524.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 7.1982]
gi|445036588|ref|ZP_21352108.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1762]
gi|445042263|ref|ZP_21357627.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA35]
gi|445047473|ref|ZP_21362713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 3.4880]
gi|445053042|ref|ZP_21368057.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0083]
gi|445061074|ref|ZP_21373584.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0670]
gi|450225362|ref|ZP_21897360.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O08]
gi|450252543|ref|ZP_21902129.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli S17]
gi|452968950|ref|ZP_21967177.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4009]
gi|84029291|sp|P0AGJ3.1|TRMH_ECO57 RecName: Full=tRNA (guanosine(18)-2'-O)-methyltransferase; AltName:
Full=tRNA [Gm18] methyltransferase
gi|84029292|sp|P0AGJ2.1|TRMH_ECOLI RecName: Full=tRNA (guanosine(18)-2'-O)-methyltransferase; AltName:
Full=tRNA [Gm18] methyltransferase
gi|84029293|sp|P0AGJ4.1|TRMH_SHIFL RecName: Full=tRNA (guanosine(18)-2'-O)-methyltransferase; AltName:
Full=tRNA [Gm18] methyltransferase
gi|12518410|gb|AAG58795.1|AE005592_6 putative RNA methylase [Escherichia coli O157:H7 str. EDL933]
gi|147866|gb|AAB00161.1| spoU [Escherichia coli]
gi|290501|gb|AAA62004.1| spoU [Escherichia coli]
gi|1790083|gb|AAC76675.1| tRNA mG18-2'-O-methyltransferase, SAM-dependent [Escherichia coli
str. K-12 substr. MG1655]
gi|13364001|dbj|BAB37949.1| putative RNA methylase [Escherichia coli O157:H7 str. Sakai]
gi|24054164|gb|AAN45138.1| putative RNA methylase [Shigella flexneri 2a str. 301]
gi|30043334|gb|AAP19055.1| putative RNA methylase [Shigella flexneri 2a str. 2457T]
gi|73857591|gb|AAZ90298.1| putative RNA methylase [Shigella sonnei Ss046]
gi|81247491|gb|ABB68199.1| putative RNA methylase [Shigella boydii Sb227]
gi|85676392|dbj|BAE77642.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli str. K12
substr. W3110]
gi|110617219|gb|ABF05886.1| putative RNA methylase [Shigella flexneri 5 str. 8401]
gi|157068812|gb|ABV08067.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli HS]
gi|169753047|gb|ACA75746.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ATCC 8739]
gi|169890993|gb|ACB04700.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli str.
K-12 substr. DH10B]
gi|187771590|gb|EDU35434.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4196]
gi|188017001|gb|EDU55123.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4113]
gi|188491145|gb|EDU66248.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 53638]
gi|189002529|gb|EDU71515.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4076]
gi|189359254|gb|EDU77673.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4401]
gi|189364456|gb|EDU82875.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4486]
gi|189369492|gb|EDU87908.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4501]
gi|189374444|gb|EDU92860.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC869]
gi|189378798|gb|EDU97214.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC508]
gi|190902169|gb|EDV61912.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B7A]
gi|192930577|gb|EDV83184.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E22]
gi|194411884|gb|EDX28201.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B171]
gi|194425496|gb|EDX41480.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 101-1]
gi|208725933|gb|EDZ75534.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4206]
gi|208734072|gb|EDZ82759.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4045]
gi|208739228|gb|EDZ86910.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4042]
gi|209160263|gb|ACI37696.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4115]
gi|209754528|gb|ACI75571.1| putative RNA methylase [Escherichia coli]
gi|209754530|gb|ACI75572.1| putative RNA methylase [Escherichia coli]
gi|209754532|gb|ACI75573.1| putative RNA methylase [Escherichia coli]
gi|209754534|gb|ACI75574.1| putative RNA methylase [Escherichia coli]
gi|209754536|gb|ACI75575.1| putative RNA methylase [Escherichia coli]
gi|209914383|dbj|BAG79457.1| putative RNA methyltransferase [Escherichia coli SE11]
gi|217320350|gb|EEC28774.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. TW14588]
gi|218358719|emb|CAQ91377.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia fergusonii
ATCC 35469]
gi|218362982|emb|CAR00620.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli IAI1]
gi|226838817|gb|EEH70844.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 1_1_43]
gi|238863706|gb|ACR65704.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli BW2952]
gi|242379175|emb|CAQ33977.1| tRNA (Gm18) 2'-O-methyltransferase [Escherichia coli BL21(DE3)]
gi|253322551|gb|ACT27153.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975480|gb|ACT41151.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli B str.
REL606]
gi|253979636|gb|ACT45306.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli
BL21(DE3)]
gi|254595006|gb|ACT74367.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O157:H7
str. TW14359]
gi|257756603|dbj|BAI28105.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O26:H11
str. 11368]
gi|257766737|dbj|BAI38232.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O111:H-
str. 11128]
gi|260447330|gb|ACX37752.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DH1]
gi|281603014|gb|ADA75998.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2002017]
gi|290764895|gb|ADD58856.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|291321607|gb|EFE61043.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B088]
gi|309704053|emb|CBJ03399.1| tRNA (guanosine-2'-O)-methyltransferase [Escherichia coli ETEC
H10407]
gi|310334440|gb|EFQ00645.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 1827-70]
gi|315138233|dbj|BAJ45392.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DH1]
gi|320177349|gb|EFW52351.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae CDC
74-1112]
gi|320185701|gb|EFW60459.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri CDC
796-83]
gi|320191296|gb|EFW65946.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC1212]
gi|320201323|gb|EFW75904.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4100B]
gi|320639558|gb|EFX09166.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. G5101]
gi|320644997|gb|EFX14027.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H-
str. 493-89]
gi|320650264|gb|EFX18753.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H-
str. H 2687]
gi|320655616|gb|EFX23544.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661350|gb|EFX28774.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666364|gb|EFX33363.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. LSU-61]
gi|323155304|gb|EFZ41487.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli EPECa14]
gi|323166862|gb|EFZ52601.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella sonnei 53G]
gi|323173260|gb|EFZ58889.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli LT-68]
gi|323177656|gb|EFZ63240.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli OK1180]
gi|323934804|gb|EGB31186.1| SpoU rRNA methylase [Escherichia coli E1520]
gi|323939589|gb|EGB35795.1| SpoU rRNA methylase [Escherichia coli E482]
gi|323944104|gb|EGB40184.1| SpoU rRNA methylase [Escherichia coli H120]
gi|323959899|gb|EGB55547.1| SpoU rRNA methylase [Escherichia coli H489]
gi|323971293|gb|EGB66538.1| SpoU rRNA methylase [Escherichia coli TA007]
gi|323975130|gb|EGB70235.1| SpoU rRNA methylase [Escherichia coli TW10509]
gi|324111545|gb|EGC05526.1| SpoU rRNA methylase [Escherichia fergusonii B253]
gi|324116010|gb|EGC09936.1| SpoU rRNA methylase [Escherichia coli E1167]
gi|325499457|gb|EGC97316.1| tRNA guanosine-2'-O-methyltransferase [Escherichia fergusonii
ECD227]
gi|326337349|gb|EGD61184.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. 1044]
gi|326339847|gb|EGD63654.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. 1125]
gi|331062554|gb|EGI34474.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA271]
gi|331072915|gb|EGI44240.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H591]
gi|332345640|gb|AEE58974.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli UMNK88]
gi|332751201|gb|EGJ81604.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri
2747-71]
gi|332996123|gb|EGK15750.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri VA-6]
gi|332997752|gb|EGK17363.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-272]
gi|333012867|gb|EGK32244.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-304]
gi|335572887|gb|EGM59250.1| spoU rRNA Methylase family protein [Shigella flexneri J1713]
gi|345331218|gb|EGW63678.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 2534-86]
gi|345347430|gb|EGW79740.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_94C]
gi|345354352|gb|EGW86577.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_DG131-3]
gi|345373014|gb|EGX04976.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_H.1.8]
gi|345390558|gb|EGX20356.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli TX1999]
gi|359333796|dbj|BAL40243.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli str.
K-12 substr. MDS42]
gi|371592656|gb|EHN81553.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H494]
gi|374361051|gb|AEZ42758.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|375319774|gb|EHS65849.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H43
str. T22]
gi|377889529|gb|EHU53989.1| spoU rRNA Methylase family protein [Escherichia coli DEC3A]
gi|377902641|gb|EHU66944.1| spoU rRNA Methylase family protein [Escherichia coli DEC3C]
gi|377906859|gb|EHU71100.1| spoU rRNA Methylase family protein [Escherichia coli DEC3D]
gi|377907551|gb|EHU71775.1| spoU rRNA Methylase family protein [Escherichia coli DEC3E]
gi|377917783|gb|EHU81839.1| spoU rRNA Methylase family protein [Escherichia coli DEC3F]
gi|377923543|gb|EHU87507.1| spoU rRNA Methylase family protein [Escherichia coli DEC4A]
gi|377927834|gb|EHU91749.1| spoU rRNA Methylase family protein [Escherichia coli DEC4B]
gi|377937772|gb|EHV01546.1| spoU rRNA Methylase family protein [Escherichia coli DEC4D]
gi|377938128|gb|EHV01897.1| spoU rRNA Methylase family protein [Escherichia coli DEC4C]
gi|377944186|gb|EHV07891.1| spoU rRNA Methylase family protein [Escherichia coli DEC4E]
gi|377954715|gb|EHV18274.1| spoU rRNA Methylase family protein [Escherichia coli DEC4F]
gi|377962280|gb|EHV25741.1| spoU rRNA Methylase family protein [Escherichia coli DEC5B]
gi|377965212|gb|EHV28637.1| spoU rRNA Methylase family protein [Escherichia coli DEC5A]
gi|377970032|gb|EHV33404.1| spoU rRNA Methylase family protein [Escherichia coli DEC5C]
gi|378011712|gb|EHV74650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC7A]
gi|378021306|gb|EHV84019.1| spoU rRNA Methylase family protein [Escherichia coli DEC7C]
gi|378024730|gb|EHV87383.1| spoU rRNA Methylase family protein [Escherichia coli DEC7D]
gi|378029379|gb|EHV91991.1| spoU rRNA Methylase family protein [Escherichia coli DEC7B]
gi|378034514|gb|EHV97079.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC7E]
gi|378043490|gb|EHW05925.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC8A]
gi|378043866|gb|EHW06296.1| spoU rRNA Methylase family protein [Escherichia coli DEC8B]
gi|378048941|gb|EHW11292.1| spoU rRNA Methylase family protein [Escherichia coli DEC8C]
gi|378061534|gb|EHW23718.1| spoU rRNA Methylase family protein [Escherichia coli DEC8E]
gi|378068322|gb|EHW30425.1| spoU rRNA Methylase family protein [Escherichia coli DEC9A]
gi|378073603|gb|EHW35649.1| spoU rRNA Methylase family protein [Escherichia coli DEC9B]
gi|378079382|gb|EHW41359.1| spoU rRNA Methylase family protein [Escherichia coli DEC9C]
gi|378086882|gb|EHW48752.1| spoU rRNA Methylase family protein [Escherichia coli DEC9D]
gi|378089351|gb|EHW51194.1| spoU rRNA Methylase family protein [Escherichia coli DEC9E]
gi|378096086|gb|EHW57862.1| spoU rRNA Methylase family protein [Escherichia coli DEC10A]
gi|378101639|gb|EHW63324.1| spoU rRNA Methylase family protein [Escherichia coli DEC10B]
gi|378106552|gb|EHW68181.1| spoU rRNA Methylase family protein [Escherichia coli DEC10C]
gi|378112710|gb|EHW74284.1| spoU rRNA Methylase family protein [Escherichia coli DEC10D]
gi|378124799|gb|EHW86203.1| spoU rRNA Methylase family protein [Escherichia coli DEC10F]
gi|378125315|gb|EHW86716.1| spoU rRNA Methylase family protein [Escherichia coli DEC11A]
gi|378138480|gb|EHW99734.1| spoU rRNA Methylase family protein [Escherichia coli DEC11B]
gi|378144458|gb|EHX05630.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11D]
gi|378146587|gb|EHX07738.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11C]
gi|378155627|gb|EHX16686.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11E]
gi|378160994|gb|EHX21979.1| spoU rRNA Methylase family protein [Escherichia coli DEC12B]
gi|378165287|gb|EHX26223.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC12A]
gi|378165634|gb|EHX26565.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC12C]
gi|378179029|gb|EHX39769.1| spoU rRNA Methylase family protein [Escherichia coli DEC12D]
gi|378182575|gb|EHX43225.1| spoU rRNA Methylase family protein [Escherichia coli DEC13A]
gi|378183155|gb|EHX43801.1| spoU rRNA Methylase family protein [Escherichia coli DEC12E]
gi|378195792|gb|EHX56283.1| spoU rRNA Methylase family protein [Escherichia coli DEC13B]
gi|378196067|gb|EHX56557.1| spoU rRNA Methylase family protein [Escherichia coli DEC13C]
gi|378198907|gb|EHX59376.1| spoU rRNA Methylase family protein [Escherichia coli DEC13D]
gi|378209847|gb|EHX70214.1| spoU rRNA Methylase family protein [Escherichia coli DEC13E]
gi|378213883|gb|EHX74195.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC14A]
gi|378233212|gb|EHX93302.1| spoU rRNA Methylase family protein [Escherichia coli DEC15A]
gi|378240831|gb|EHY00801.1| spoU rRNA Methylase family protein [Escherichia coli DEC15B]
gi|378243021|gb|EHY02968.1| spoU rRNA Methylase family protein [Escherichia coli DEC15C]
gi|378252001|gb|EHY11896.1| spoU rRNA Methylase family protein [Escherichia coli DEC15D]
gi|378256473|gb|EHY16324.1| spoU rRNA Methylase family protein [Escherichia coli DEC15E]
gi|380346318|gb|EIA34613.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SCI-07]
gi|383105089|gb|AFG42598.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli P12b]
gi|383469096|gb|EID64117.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 5a str.
M90T]
gi|384381332|gb|EIE39191.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli J53]
gi|385156349|gb|EIF18346.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O32:H37
str. P4]
gi|385708879|gb|EIG45881.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B799]
gi|386151304|gb|EIH02593.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
5.0588]
gi|386166233|gb|EIH32753.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
96.0497]
gi|386172307|gb|EIH44337.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
99.0741]
gi|386176562|gb|EIH54041.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.2608]
gi|386182886|gb|EIH65642.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
93.0624]
gi|386186879|gb|EIH75702.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
4.0522]
gi|386195983|gb|EIH90211.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
JB1-95]
gi|386200536|gb|EIH99526.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
96.154]
gi|386206963|gb|EII11468.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
5.0959]
gi|386214621|gb|EII25037.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
9.0111]
gi|386219937|gb|EII36401.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
4.0967]
gi|386229380|gb|EII56735.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.3884]
gi|386259797|gb|EIJ15271.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
900105 (10e)]
gi|386798286|gb|AFJ31320.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli Xuzhou21]
gi|388333279|gb|EIK99915.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O103:H25
str. CVM9340]
gi|388334743|gb|EIL01325.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O103:H2
str. CVM9450]
gi|388339575|gb|EIL05930.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9534]
gi|388353982|gb|EIL18946.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9574]
gi|388355619|gb|EIL20442.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9570]
gi|388358760|gb|EIL23161.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9545]
gi|388370673|gb|EIL34189.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM9942]
gi|388377220|gb|EIL40046.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10026]
gi|388388864|gb|EIL50412.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 541-15]
gi|388418730|gb|EIL78512.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CUMT8]
gi|390638081|gb|EIN17602.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1996]
gi|390638873|gb|EIN18364.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA505]
gi|390639496|gb|EIN18970.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA517]
gi|390656833|gb|EIN34674.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1985]
gi|390657290|gb|EIN35114.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93-001]
gi|390660441|gb|EIN38146.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1990]
gi|390678043|gb|EIN54042.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA5]
gi|390681307|gb|EIN57101.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA9]
gi|390692742|gb|EIN67404.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA10]
gi|390696995|gb|EIN71430.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA14]
gi|390698071|gb|EIN72462.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA15]
gi|390711657|gb|EIN84618.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA22]
gi|390718891|gb|EIN91633.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA25]
gi|390719640|gb|EIN92364.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA24]
gi|390724775|gb|EIN97315.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA28]
gi|390737917|gb|EIO09159.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA31]
gi|390738662|gb|EIO09868.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA32]
gi|390741990|gb|EIO13016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA33]
gi|390755924|gb|EIO25445.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA40]
gi|390760473|gb|EIO29800.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA39]
gi|390763639|gb|EIO32874.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA41]
gi|390765720|gb|EIO34877.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA42]
gi|390779354|gb|EIO47068.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW06591]
gi|390786364|gb|EIO53879.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW07945]
gi|390794551|gb|EIO61841.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW11039]
gi|390800890|gb|EIO67960.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09098]
gi|390805068|gb|EIO72016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09109]
gi|390814281|gb|EIO80861.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW10119]
gi|390822976|gb|EIO89054.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4203]
gi|390823682|gb|EIO89721.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09195]
gi|390827948|gb|EIO93648.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4196]
gi|390841573|gb|EIP05487.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW14313]
gi|390843340|gb|EIP07141.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW14301]
gi|390863039|gb|EIP25196.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4013]
gi|390867079|gb|EIP28933.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4402]
gi|390875446|gb|EIP36472.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4439]
gi|390881026|gb|EIP41668.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4436]
gi|390890715|gb|EIP50374.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4437]
gi|390892513|gb|EIP52099.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4448]
gi|390898844|gb|EIP58105.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1738]
gi|390905974|gb|EIP64888.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1734]
gi|391244280|gb|EIQ03565.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-1770]
gi|391244421|gb|EIQ03705.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2850-71]
gi|391245621|gb|EIQ04888.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri CCH060]
gi|391261523|gb|EIQ20570.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-404]
gi|391273194|gb|EIQ32021.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii 4444-74]
gi|391277912|gb|EIQ36636.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 3226-85]
gi|391291941|gb|EIQ50301.1| spoU rRNA Methylase family protein [Shigella sonnei 4822-66]
gi|391297782|gb|EIQ55821.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae 225-75]
gi|391299139|gb|EIQ57105.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 1235-66]
gi|391301972|gb|EIQ59849.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EPECa12]
gi|394384818|gb|EJE62371.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9634]
gi|394390300|gb|EJE67319.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10224]
gi|394392836|gb|EJE69570.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9602]
gi|394404323|gb|EJE79737.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9553]
gi|394407623|gb|EJE82435.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9455]
gi|394410915|gb|EJE85232.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10021]
gi|394423468|gb|EJE96714.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM9952]
gi|394429267|gb|EJF01706.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10030]
gi|397783245|gb|EJK94105.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_O31]
gi|397893989|gb|EJL10441.1| spoU rRNA Methylase family protein [Shigella flexneri 6603-63]
gi|397895666|gb|EJL12092.1| spoU rRNA Methylase family protein [Shigella sonnei str. Moseley]
gi|408064914|gb|EKG99395.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK920]
gi|408074204|gb|EKH08489.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA7]
gi|408101233|gb|EKH33697.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1997]
gi|408106085|gb|EKH38206.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE1487]
gi|408125257|gb|EKH55868.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA4]
gi|408135058|gb|EKH64863.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA23]
gi|408137289|gb|EKH66994.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA49]
gi|408144159|gb|EKH73407.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA45]
gi|408152481|gb|EKH80914.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TT12B]
gi|408157570|gb|EKH85714.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli MA6]
gi|408161594|gb|EKH89541.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5905]
gi|408177617|gb|EKI04391.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC96038]
gi|408180879|gb|EKI07475.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5412]
gi|408213861|gb|EKI38339.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA38]
gi|408224115|gb|EKI47843.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1735]
gi|408225322|gb|EKI49005.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli N1]
gi|408235536|gb|EKI58482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1736]
gi|408238958|gb|EKI61731.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1737]
gi|408243979|gb|EKI66456.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1846]
gi|408252513|gb|EKI74157.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1847]
gi|408263181|gb|EKI84053.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1849]
gi|408271549|gb|EKI91672.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1850]
gi|408274522|gb|EKI94522.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1856]
gi|408282917|gb|EKJ02167.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1862]
gi|408288850|gb|EKJ07647.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1864]
gi|408293359|gb|EKJ11803.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1865]
gi|408304104|gb|EKJ21539.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1868]
gi|408321593|gb|EKJ37611.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1870]
gi|408324123|gb|EKJ40075.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE098]
gi|408334287|gb|EKJ49177.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK523]
gi|408340788|gb|EKJ55268.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 0.1288]
gi|408342744|gb|EKJ57164.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 0.1304]
gi|408457322|gb|EKJ81119.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli AD30]
gi|408545538|gb|EKK22966.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5.2239]
gi|408576090|gb|EKK51710.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0833]
gi|408578916|gb|EKK54407.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.2524]
gi|408588829|gb|EKK63387.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0869]
gi|408599251|gb|EKK73169.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0416]
gi|412965031|emb|CCK48961.1| putative RNA methylase [Escherichia coli chi7122]
gi|412971614|emb|CCJ46277.1| putative RNA methylase [Escherichia coli]
gi|421936264|gb|EKT93931.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CFSAN001632]
gi|421941542|gb|EKT98935.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CFSAN001629]
gi|421946486|gb|EKU03611.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CFSAN001630]
gi|427201858|gb|EKV72225.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.1042]
gi|427205373|gb|EKV75623.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.1467]
gi|427218307|gb|EKV87322.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.0091]
gi|427221614|gb|EKV90438.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.2281]
gi|427238826|gb|EKW06330.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93.0056]
gi|427239005|gb|EKW06503.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93.0055]
gi|427243249|gb|EKW10634.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 94.0618]
gi|427256750|gb|EKW22902.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0183]
gi|427258324|gb|EKW24417.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0943]
gi|427260353|gb|EKW26343.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.1288]
gi|427273545|gb|EKW38226.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0428]
gi|427275934|gb|EKW40519.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0427]
gi|427296099|gb|EKW59162.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0107]
gi|427298287|gb|EKW61303.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0003]
gi|427308501|gb|EKW70879.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.1742]
gi|427316437|gb|EKW78384.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0672]
gi|427326900|gb|EKW88305.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0713]
gi|430890953|gb|ELC13501.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE10]
gi|430895778|gb|ELC18031.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE12]
gi|430936241|gb|ELC56524.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE44]
gi|431060073|gb|ELD69411.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE233]
gi|431111896|gb|ELE15786.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE56]
gi|431160222|gb|ELE60737.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE77]
gi|431207460|gb|ELF05716.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE119]
gi|431259427|gb|ELF51792.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE9]
gi|431336500|gb|ELG23610.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE78]
gi|431348481|gb|ELG35338.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE79]
gi|431359858|gb|ELG46483.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE101]
gi|431381995|gb|ELG66344.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE136]
gi|431417258|gb|ELG99721.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE154]
gi|431476907|gb|ELH56694.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE203]
gi|431606777|gb|ELI76149.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE138]
gi|431642593|gb|ELJ10315.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE163]
gi|431653110|gb|ELJ20222.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE166]
gi|431717265|gb|ELJ81365.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE94]
gi|441650898|emb|CCQ03344.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443424232|gb|AGC89136.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli APEC O78]
gi|444535408|gb|ELV15494.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0814]
gi|444545648|gb|ELV24495.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0815]
gi|444554939|gb|ELV32443.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0816]
gi|444555014|gb|ELV32507.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0839]
gi|444560071|gb|ELV37253.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0848]
gi|444569494|gb|ELV46082.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1753]
gi|444573273|gb|ELV49657.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1775]
gi|444576565|gb|ELV52728.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1793]
gi|444589888|gb|ELV65209.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ATCC
700728]
gi|444603685|gb|ELV78382.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA13]
gi|444612921|gb|ELV87201.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA2]
gi|444620342|gb|ELV94350.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA47]
gi|444620790|gb|ELV94784.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA48]
gi|444635704|gb|ELW09121.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 7.1982]
gi|444642502|gb|ELW15690.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1762]
gi|444652039|gb|ELW24818.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA35]
gi|444657307|gb|ELW29793.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 3.4880]
gi|444660432|gb|ELW32802.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0083]
gi|444667248|gb|ELW39287.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0670]
gi|449313909|gb|EMD04095.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O08]
gi|449314618|gb|EMD04781.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli S17]
Length = 229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|392310598|ref|ZP_10273132.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas citrea
NCIMB 1889]
Length = 232
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R V+ R + + ++ + N+SA R+ADA+G VH V +R N
Sbjct: 4 KRYHRVKRVLDRRQTDLTVCLDEVHKHHNLSAIVRTADAVGCHHVHAVWPQEQRRLTNN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRG--YRIATTHVGMDAISVYDMDWSCPTAIVVG 262
S G++ W++ + D + +R++ +I T++ A+ ++D++ PTAI+VG
Sbjct: 63 -TSGGSKNWVETHMHDDIHDAVGAIRAQNPDIQILATNLSDSAVDFREIDYTKPTAIIVG 121
Query: 263 NENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC 315
E G+SD+AL+ +D IPM+GMV S NVSVAA ++++ A R GC
Sbjct: 122 QERTGISDDALAHADQHIVIPMEGMVQSLNVSVAAALILYEA--QRQREAAGC 172
>gi|187732340|ref|YP_001882364.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii CDC 3083-94]
gi|187429332|gb|ACD08606.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii CDC 3083-94]
Length = 229
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQHLLFE-------GGYPVLAKVAKRK 202
>gi|90407844|ref|ZP_01216020.1| putative tRNA methyltransferase [Psychromonas sp. CNPT3]
gi|90311019|gb|EAS39128.1| putative tRNA methyltransferase [Psychromonas sp. CNPT3]
Length = 228
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 104/188 (55%), Gaps = 6/188 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R N++ +R + +++E + N++A R+ADA+GV VH + +K +
Sbjct: 4 ERFARITNMLNHRQPELTVLLEDVHKSHNLAAIVRTADAVGVNDVH--ATRETKTTKVCG 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G++ W+ I + + LR++G +I T++ AI ++D++ PTAI++G E
Sbjct: 62 VTATGSQNWVKIHTHENIEDAIAALRAQGMQIIATNLSDTAIDFREVDYTKPTAILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGD--LTSE 322
G+S +AL+L+D IPM GM S NVSVA+ ++++ A R G G+ L+
Sbjct: 122 KTGISAQALALADQDVIIPMLGMCQSLNVSVASALILYEA--QRQRENAGMYGECRLSDA 179
Query: 323 EKQILLAE 330
EK +L E
Sbjct: 180 EKHRILFE 187
>gi|386284238|ref|ZP_10061460.1| tRNA (guanosine-2'-O-)-methyltransferase [Sulfurovum sp. AR]
gi|385344523|gb|EIF51237.1| tRNA (guanosine-2'-O-)-methyltransferase [Sulfurovum sp. AR]
Length = 217
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 99/169 (58%), Gaps = 3/169 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L E+R R +V+ + + ++++ L N+SA RSADA+GV ++ + + + R
Sbjct: 2 LNEKRITRIDDVLSKKQPDLQVMLDNLHSSQNLSAIIRSADAVGVLDIYYATKEDAS-LR 60
Query: 202 ENRHVSMGAEKWLD-IELWDAPRECF-NVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
++ ++ GA +W + D + F +++G+++ TH+ A+S ++D++ PT +
Sbjct: 61 IHKTITQGAHRWTHRYRMHDDHKVSFIKEKKTQGFQVVVTHLEEQAVSFREIDYTKPTLL 120
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
V+GNE GVS E + L+D IPM+GMV S NVSVA G++++ A R
Sbjct: 121 VMGNEKEGVSSEIVKLADEIIIIPMQGMVQSLNVSVATGLILYEAQRQR 169
>gi|216264824|ref|ZP_03436816.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 156a]
gi|223889195|ref|ZP_03623784.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 64b]
gi|387825711|ref|YP_005805164.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi JD1]
gi|215981297|gb|EEC22104.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 156a]
gi|223885444|gb|EEF56545.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 64b]
gi|312148144|gb|ADQ30803.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi JD1]
Length = 218
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+ LS ++ +E+K R V+ R+ + V+E + N SAT R+ + LG+ VHV+
Sbjct: 9 IGVLSKFITDEKKARIEKVLNLRTNYLTFVLEDIFQSQNASATIRTGEILGLSDVHVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ ++ N V++G+ +W+++ + + + L+S GY I T + +I++ ++ +
Sbjct: 67 EKKNKHTLNPDVTLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLNPKSINLENLTIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
AI G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAIFFGTELTGLSAEVLGAADLYVKIPMHGFTQSYNISVAVAIVMY 174
>gi|421360153|ref|ZP_15810439.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421363735|ref|ZP_15813975.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421368699|ref|ZP_15818884.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370768|ref|ZP_15820931.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378330|ref|ZP_15828418.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421382937|ref|ZP_15832982.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421387261|ref|ZP_15837266.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421391965|ref|ZP_15841930.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421396435|ref|ZP_15846363.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421400783|ref|ZP_15850668.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421405391|ref|ZP_15855225.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421406944|ref|ZP_15856754.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421414441|ref|ZP_15864185.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421418899|ref|ZP_15868599.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421421081|ref|ZP_15870756.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421427602|ref|ZP_15877221.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421432452|ref|ZP_15882024.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421437711|ref|ZP_15887227.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421441711|ref|ZP_15891176.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421443588|ref|ZP_15893029.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|436808125|ref|ZP_20527762.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812550|ref|ZP_20530981.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436845710|ref|ZP_20538948.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436853658|ref|ZP_20543486.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436855219|ref|ZP_20544528.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436866533|ref|ZP_20552050.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436869395|ref|ZP_20553611.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436882595|ref|ZP_20561349.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436889671|ref|ZP_20565385.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436894911|ref|ZP_20568115.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436904775|ref|ZP_20574736.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436914042|ref|ZP_20579244.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436921553|ref|ZP_20583854.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436928620|ref|ZP_20587857.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436934607|ref|ZP_20590567.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436941584|ref|ZP_20595090.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436953042|ref|ZP_20601507.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436965322|ref|ZP_20606568.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436967735|ref|ZP_20607489.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436978299|ref|ZP_20612441.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436988148|ref|ZP_20616151.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437003033|ref|ZP_20621459.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437013942|ref|ZP_20625303.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437032691|ref|ZP_20632071.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437043902|ref|ZP_20636976.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437051274|ref|ZP_20641245.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437057221|ref|ZP_20644496.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437063960|ref|ZP_20648275.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078085|ref|ZP_20655931.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437082664|ref|ZP_20658506.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437095918|ref|ZP_20664716.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437114800|ref|ZP_20669184.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437119799|ref|ZP_20671046.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437129916|ref|ZP_20676372.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437136312|ref|ZP_20679777.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437148209|ref|ZP_20687377.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437150806|ref|ZP_20688865.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437161338|ref|ZP_20695374.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437169732|ref|ZP_20699945.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437174781|ref|ZP_20702368.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437184058|ref|ZP_20708056.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437262817|ref|ZP_20719147.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437271351|ref|ZP_20723615.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437274019|ref|ZP_20725050.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437291570|ref|ZP_20731634.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437304269|ref|ZP_20733982.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437373032|ref|ZP_20749520.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437430561|ref|ZP_20755764.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437449602|ref|ZP_20759341.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437464151|ref|ZP_20763514.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437479451|ref|ZP_20767964.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437491092|ref|ZP_20771318.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437506726|ref|ZP_20775915.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437533802|ref|ZP_20781204.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437560185|ref|ZP_20785953.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437572922|ref|ZP_20789346.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437585924|ref|ZP_20793115.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437605884|ref|ZP_20799507.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437620180|ref|ZP_20803966.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437646744|ref|ZP_20809089.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437661343|ref|ZP_20812953.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437677719|ref|ZP_20817385.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437697445|ref|ZP_20822934.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437708541|ref|ZP_20825966.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437724198|ref|ZP_20829558.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437758962|ref|ZP_20834561.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437814128|ref|ZP_20842250.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437899647|ref|ZP_20849759.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|437988070|ref|ZP_20853648.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438091720|ref|ZP_20861125.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438097257|ref|ZP_20862273.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438115366|ref|ZP_20870489.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|445175132|ref|ZP_21397263.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445186215|ref|ZP_21399127.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445233093|ref|ZP_21406311.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445345909|ref|ZP_21418511.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445356524|ref|ZP_21421809.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|395982842|gb|EJH92039.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395983787|gb|EJH92978.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395985765|gb|EJH94931.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395996839|gb|EJI05883.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395996955|gb|EJI05998.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396006052|gb|EJI15023.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396009661|gb|EJI18585.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396010039|gb|EJI18953.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396010401|gb|EJI19314.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396023087|gb|EJI31889.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396024076|gb|EJI32866.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396032419|gb|EJI41142.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396036483|gb|EJI45143.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396037279|gb|EJI45929.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396043327|gb|EJI51931.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396049849|gb|EJI58387.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396050178|gb|EJI58710.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396050859|gb|EJI59378.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396063308|gb|EJI71707.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396070270|gb|EJI78599.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|434967875|gb|ELL60658.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434976121|gb|ELL68378.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434978324|gb|ELL70364.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434983768|gb|ELL75549.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434993163|gb|ELL84601.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434994160|gb|ELL85533.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435003071|gb|ELL94109.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435003294|gb|ELL94314.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435007256|gb|ELL98110.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435015459|gb|ELM05987.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435017622|gb|ELM08112.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435023842|gb|ELM14082.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435025221|gb|ELM15390.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435034405|gb|ELM24288.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435040649|gb|ELM30404.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435044805|gb|ELM34473.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435047299|gb|ELM36893.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435048705|gb|ELM38263.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435061055|gb|ELM50292.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435070219|gb|ELM59215.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435072556|gb|ELM61463.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435073258|gb|ELM62136.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435078739|gb|ELM67460.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435082004|gb|ELM70630.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435086235|gb|ELM74779.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435092500|gb|ELM80856.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435095711|gb|ELM83996.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435101627|gb|ELM89772.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435102087|gb|ELM90202.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435109251|gb|ELM97205.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435109416|gb|ELM97369.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435115681|gb|ELN03442.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435126271|gb|ELN13675.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435128721|gb|ELN16048.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435133107|gb|ELN20288.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435136133|gb|ELN23225.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435145323|gb|ELN32142.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435145459|gb|ELN32271.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435148119|gb|ELN34855.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435157449|gb|ELN43901.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435161392|gb|ELN47620.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435161929|gb|ELN48142.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435169825|gb|ELN55583.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435176779|gb|ELN62145.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435181764|gb|ELN66817.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435188395|gb|ELN73112.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435198969|gb|ELN83089.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435206037|gb|ELN89598.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435208949|gb|ELN92334.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435217639|gb|ELO00055.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435219756|gb|ELO02087.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435229587|gb|ELO10946.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435234361|gb|ELO15226.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435238689|gb|ELO19314.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435241967|gb|ELO22280.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435247286|gb|ELO27257.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435256508|gb|ELO35812.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435257871|gb|ELO37149.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435260486|gb|ELO39681.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435268786|gb|ELO47366.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435271478|gb|ELO49940.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435274959|gb|ELO53053.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435276037|gb|ELO54062.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435290502|gb|ELO67423.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435293327|gb|ELO70031.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435296056|gb|ELO72479.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435309698|gb|ELO84347.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435315661|gb|ELO88886.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435321805|gb|ELO94169.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|435327061|gb|ELO98837.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435328285|gb|ELO99863.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435337146|gb|ELP06815.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|444858683|gb|ELX83662.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444861616|gb|ELX86490.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444869641|gb|ELX94212.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444878843|gb|ELY02957.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444887002|gb|ELY10738.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 229
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHSIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|220903872|ref|YP_002479184.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868171|gb|ACL48506.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 250
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E RK R + V+ +R + LV+ + D NVSA +RS DA GV V++ ++
Sbjct: 61 ERRKARLLEVLAHRQPDLTLVLANIHDPHNVSAIYRSCDAFGVSRVNLYYTNTPFPAL-G 119
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
R S A KW++ LR + ++ T A + D D++ PTA+++GN
Sbjct: 120 RKTSASARKWVESARHKDSAALMESLRGQNMQVLATSCSPTARPLRDWDFTRPTAVIMGN 179
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
E+ GV E L ++D IPM GM+ SFNVSVAA I++ A R
Sbjct: 180 EHSGVEPELLQMADGELYIPMYGMIQSFNVSVAAAIILSEAARQR 224
>gi|422021487|ref|ZP_16367999.1| tRNA guanosine-2'-O-methyltransferase [Providencia sneebia DSM
19967]
gi|414099345|gb|EKT60988.1| tRNA guanosine-2'-O-methyltransferase [Providencia sneebia DSM
19967]
Length = 237
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 27/217 (12%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E R R ++ R + + +E + NVSA RSADA+G+ +H + D
Sbjct: 3 ERRYRRICQMMAMRQPDLTICLEEIHKPHNVSAIVRSADAVGIHQIHAIWPD-------- 54
Query: 204 RHVSM------GAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
+HV + G W+ + + + + L+S+ +I T++ +A+ ++D++ PT
Sbjct: 55 QHVKLSVSSAAGCNSWVKVVTHHSTEDAISQLKSQNMQILVTNLSDNAVDFREIDYTRPT 114
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC-- 315
I++G E +G+S +AL+L+D IPM GMV S NVSVA+ ++++ A R +L G
Sbjct: 115 CIMMGQEKKGISPQALALADQHIIIPMVGMVQSLNVSVASALILYEA--QRQRQLAGMYT 172
Query: 316 --NGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
LT +E+Q L E ++ E AKRK
Sbjct: 173 REQSLLTEQEQQEWLFE-------GGYPVLAEVAKRK 202
>gi|421727986|ref|ZP_16167143.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca M5al]
gi|410371168|gb|EKP25892.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca M5al]
Length = 229
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R +
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAIWPGSHMRTMAS- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E L+ +G +I TH+ A+ ++D++ PT I++G E
Sbjct: 63 -AAAGSNSWVQVKTHRTIGEAVTHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L E
Sbjct: 122 KTGITQEALDLADQDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYQRENSMLPEE 181
Query: 323 EKQILLAE 330
++Q LL E
Sbjct: 182 DQQRLLFE 189
>gi|254786166|ref|YP_003073595.1| tRNA guanosine-2'-O-methyltransferase [Teredinibacter turnerae
T7901]
gi|237686905|gb|ACR14169.1| tRNA guanosine-2'-O-methyltransferase [Teredinibacter turnerae
T7901]
Length = 228
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 95/167 (56%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER +R +V+ R + ++ + + N+SA R+ DA+G+ ++H V + Y+
Sbjct: 1 MTPERFQRITSVLNKRQPDLTVITDEVHKGRNLSAITRTCDAVGIDTIHCVMPEDG--YQ 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
S AEKW+ ++ + N L+ G+++ ++G + + ++D++ PTA+V+
Sbjct: 59 TYNGTSASAEKWVAVQHHSSISAPVNDLKREGFQLVAANLGDNTLDYRNVDYTKPTALVL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E +GVS EA + D ++PM GMV+SFNVSVAA I++ A R
Sbjct: 119 GAEVKGVSPEAAAAVDYNVTVPMVGMVESFNVSVAAAIILMEAQHQR 165
>gi|218702420|ref|YP_002410049.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli IAI39]
gi|386626472|ref|YP_006146200.1| tRNA mG18-2'-O-methyltransferase, SAM-dependen [Escherichia coli
O7:K1 str. CE10]
gi|218372406|emb|CAR20280.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli IAI39]
gi|349740208|gb|AEQ14914.1| tRNA mG18-2'-O-methyltransferase, SAM-dependen [Escherichia coli
O7:K1 str. CE10]
Length = 229
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|392976992|ref|YP_006475580.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392322925|gb|AFM57878.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 229
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V + R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGT--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E + L+ RG ++ T++ A+ ++D++ PT I++G E
Sbjct: 62 STAAGSNSWVSVKTHQTIGEAVSHLKGRGMQVLATNLSAKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYERSNSMLPED 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|411011480|ref|ZP_11387809.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas aquariorum AAK1]
Length = 231
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 7/181 (3%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++ R + + +E + N++A R+ADA+G+ VH V + R+ + G++
Sbjct: 1 MLAQRQLDLTVCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKG--TARGSQN 58
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
W+D++L L++ G +I TH+ ++ +D++ PTAI+VG E G+ +EA
Sbjct: 59 WVDVKLHPDIGSAVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQEKHGIGEEA 118
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC---NGDLTSEEKQILLA 329
L+L+D IPM GMV S NVSVAA +++ A R L GC L+ EE+ +L
Sbjct: 119 LALADHHIVIPMVGMVQSLNVSVAAAAILYEA--QRQRELAGCYQRGCPLSLEEQNSILF 176
Query: 330 E 330
E
Sbjct: 177 E 177
>gi|110643892|ref|YP_671622.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 536]
gi|170681825|ref|YP_001745951.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SMS-3-5]
gi|191170337|ref|ZP_03031890.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli F11]
gi|218707285|ref|YP_002414804.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli UMN026]
gi|293407274|ref|ZP_06651198.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FVEC1412]
gi|298383020|ref|ZP_06992615.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli
FVEC1302]
gi|331665276|ref|ZP_08366177.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA143]
gi|331685313|ref|ZP_08385899.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H299]
gi|387609413|ref|YP_006098269.1| tRNA (guanosine-2'-O)-methyltransferase [Escherichia coli 042]
gi|417142293|ref|ZP_11984868.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
97.0259]
gi|417310197|ref|ZP_12097017.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PCN033]
gi|419917521|ref|ZP_14435766.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KD2]
gi|419934196|ref|ZP_14451339.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 576-1]
gi|422334768|ref|ZP_16415773.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 4_1_47FAA]
gi|422829738|ref|ZP_16877902.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B093]
gi|422977738|ref|ZP_16977482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TA124]
gi|432394255|ref|ZP_19637075.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE21]
gi|432473001|ref|ZP_19715037.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE206]
gi|432478013|ref|ZP_19719999.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE208]
gi|432491433|ref|ZP_19733294.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE213]
gi|432545396|ref|ZP_19782225.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE236]
gi|432550880|ref|ZP_19787633.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE237]
gi|432604484|ref|ZP_19840713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE66]
gi|432618919|ref|ZP_19855016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE75]
gi|432624018|ref|ZP_19860031.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE76]
gi|432715507|ref|ZP_19950531.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE8]
gi|432768024|ref|ZP_20002415.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE50]
gi|432817428|ref|ZP_20051183.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE115]
gi|432855517|ref|ZP_20083353.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE144]
gi|432865974|ref|ZP_20088824.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE146]
gi|432871254|ref|ZP_20091574.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE147]
gi|432915251|ref|ZP_20120578.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE190]
gi|432964368|ref|ZP_20153527.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE202]
gi|433020909|ref|ZP_20208988.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE105]
gi|433065119|ref|ZP_20252022.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE125]
gi|433079848|ref|ZP_20266364.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE131]
gi|433160809|ref|ZP_20345625.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE177]
gi|433205391|ref|ZP_20389136.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE95]
gi|450194503|ref|ZP_21892426.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SEPT362]
gi|110345484|gb|ABG71721.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli 536]
gi|170519543|gb|ACB17721.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SMS-3-5]
gi|190909145|gb|EDV68731.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli F11]
gi|218434382|emb|CAR15308.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli UMN026]
gi|284923713|emb|CBG36810.1| tRNA (guanosine-2'-O)-methyltransferase [Escherichia coli 042]
gi|291426085|gb|EFE99119.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FVEC1412]
gi|298276856|gb|EFI18374.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli
FVEC1302]
gi|331057786|gb|EGI29772.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA143]
gi|331077684|gb|EGI48896.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H299]
gi|338768247|gb|EGP23047.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PCN033]
gi|371593110|gb|EHN81999.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TA124]
gi|371608220|gb|EHN96779.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B093]
gi|373244247|gb|EHP63735.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 4_1_47FAA]
gi|386155317|gb|EIH11672.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
97.0259]
gi|388393985|gb|EIL55325.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KD2]
gi|388409627|gb|EIL69904.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 576-1]
gi|430914404|gb|ELC35500.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE21]
gi|430995448|gb|ELD11741.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE206]
gi|431002042|gb|ELD17608.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE208]
gi|431017919|gb|ELD31372.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE213]
gi|431071245|gb|ELD79388.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE236]
gi|431076368|gb|ELD83864.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE237]
gi|431137123|gb|ELE38971.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE66]
gi|431150434|gb|ELE51484.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE75]
gi|431155803|gb|ELE56545.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE76]
gi|431251763|gb|ELF45769.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE8]
gi|431321914|gb|ELG09510.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE50]
gi|431360568|gb|ELG47171.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE115]
gi|431397529|gb|ELG80983.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE144]
gi|431401903|gb|ELG85235.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE146]
gi|431408254|gb|ELG91445.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE147]
gi|431436319|gb|ELH17926.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE190]
gi|431468517|gb|ELH48451.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE202]
gi|431526829|gb|ELI03565.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE105]
gi|431578009|gb|ELI50625.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE125]
gi|431593895|gb|ELI64186.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE131]
gi|431673505|gb|ELJ39727.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE177]
gi|431716190|gb|ELJ80327.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE95]
gi|449316734|gb|EMD06842.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SEPT362]
Length = 229
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|225549196|ref|ZP_03770169.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 94a]
gi|225370054|gb|EEG99494.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 94a]
Length = 218
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+ LS ++ +E+K R V+ R+ + V+E + N SAT R+ + LG+ VHV+
Sbjct: 9 IGVLSKFITDEKKARIEKVLSLRTNYLTFVLEDIFQSQNASATIRTGEILGLSDVHVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ ++ N V++G+ +W+++ + + + L+S GY I T + +I++ ++ +
Sbjct: 67 EKKNKHTLNPDVTLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLNPKSINLENLTIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
AI G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAIFFGTELTGLSAEVLGAADLYVKIPMHGFTQSYNISVAVAIVMY 174
>gi|237703445|ref|ZP_04533926.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 3_2_53FAA]
gi|422841695|ref|ZP_16889664.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H397]
gi|432789686|ref|ZP_20023812.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE65]
gi|432824582|ref|ZP_20058245.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE123]
gi|226902709|gb|EEH88968.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 3_2_53FAA]
gi|371604013|gb|EHN92647.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H397]
gi|431334855|gb|ELG21999.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE65]
gi|431377524|gb|ELG62650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE123]
Length = 229
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDSVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|410620858|ref|ZP_11331716.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola pallidula DSM
14239 = ACAM 615]
gi|410159741|dbj|GAC27090.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola pallidula DSM
14239 = ACAM 615]
Length = 233
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++K R + + +E ++ NVSA R+ DA+GV VH V + + R +
Sbjct: 8 ERYTRIRQLLKMRQPDLTVCLEEVTKAHNVSAVIRTCDAVGVHKVHAV-WNEPENLR--K 64
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG++ W+ +L + ++ + +G ++ TH+ +A D+D++ PT +++G E
Sbjct: 65 CTAMGSDVWVKTQLHNTIQQAIGHFKEQGMQVLVTHLDDNACDFRDIDYTKPTVVLLGQE 124
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G + +A++L+D +PM GMV S NVSVAA I+M+ A R
Sbjct: 125 KTGATPDAIALADHSIIVPMVGMVQSLNVSVAAAIVMYEAQGQR 168
>gi|224532063|ref|ZP_03672695.1| tRNA/rRNA methyltransferase [Borrelia valaisiana VS116]
gi|224511528|gb|EEF81934.1| tRNA/rRNA methyltransferase [Borrelia valaisiana VS116]
Length = 218
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+ LS ++ +E+K R V+ R+ + +E + N SAT R+ + LG ++HV+
Sbjct: 9 IGVLSEFITDEKKARIEEVLNRRTNYLTFALEDIFHSQNASATVRTGEILGFSNIHVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
D Y N +++G+ +W+++ + + + L+S GY I T + +I++ + +
Sbjct: 67 DKKNNYTLNPDITLGSSQWINLNKYKDSKFAIDRLKSDGYSIVATSLNEQSINLENFPIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
A+ G E G+S E L +DL IPM G S+N+SVA GI+M+
Sbjct: 127 NKMAVFFGTELTGLSAEVLGAADLYVKIPMYGFTQSYNISVAVGIVMY 174
>gi|432682447|ref|ZP_19917803.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE143]
gi|431217421|gb|ELF15000.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE143]
Length = 229
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLAMRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRKE 351
+Q LL E ++ + AKRK+
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRKD 203
>gi|15594398|ref|NP_212186.1| SpoU protein [Borrelia burgdorferi B31]
gi|218249703|ref|YP_002374583.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi ZS7]
gi|221217482|ref|ZP_03588953.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 72a]
gi|224533884|ref|ZP_03674469.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi CA-11.2a]
gi|225549731|ref|ZP_03770696.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 118a]
gi|226322036|ref|ZP_03797561.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi Bol26]
gi|3915341|sp|O51081.1|Y052_BORBU RecName: Full=Putative tRNA/rRNA methyltransferase BB_0052
gi|2687923|gb|AAC66431.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi B31]
gi|218164891|gb|ACK74952.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi ZS7]
gi|221192760|gb|EEE18976.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 72a]
gi|224512887|gb|EEF83253.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi CA-11.2a]
gi|225369691|gb|EEG99139.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 118a]
gi|226232626|gb|EEH31380.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi Bol26]
Length = 218
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+ LS ++ +E+K R V+ R+ + V+E + N SAT R+ + LG+ VHV+
Sbjct: 9 IGVLSKFITDEKKARIEKVLNLRTNYLTFVLEDIFQSQNASATIRTGEILGLSDVHVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ ++ N V++G+ +W+++ + + + L+S GY I T + +I++ ++ +
Sbjct: 67 EKKNKHTLNPDVTLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLNPKSINLENLTIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
AI G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAIFFGTELTGLSAEVLGAADLYVKIPMYGFTQSYNISVAVAIVMY 174
>gi|307314264|ref|ZP_07593872.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W]
gi|378710907|ref|YP_005275800.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KO11FL]
gi|386611022|ref|YP_006126508.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli W]
gi|386699390|ref|YP_006163227.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KO11FL]
gi|386711546|ref|YP_006175267.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W]
gi|418040454|ref|ZP_12678697.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W26]
gi|306906087|gb|EFN36606.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W]
gi|315062939|gb|ADT77266.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli W]
gi|323376468|gb|ADX48736.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KO11FL]
gi|383390917|gb|AFH15875.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KO11FL]
gi|383407238|gb|AFH13481.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W]
gi|383476605|gb|EID68541.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W26]
Length = 229
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREVDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|416900168|ref|ZP_11929479.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli STEC_7v]
gi|417116697|ref|ZP_11967558.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
1.2741]
gi|422801605|ref|ZP_16850101.1| SpoU rRNA methylase [Escherichia coli M863]
gi|323965917|gb|EGB61365.1| SpoU rRNA methylase [Escherichia coli M863]
gi|327250779|gb|EGE62481.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli STEC_7v]
gi|386139241|gb|EIG80396.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
1.2741]
Length = 229
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|197266019|ref|ZP_03166093.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197244274|gb|EDY26894.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
Length = 229
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEY 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|429085566|ref|ZP_19148537.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter condimenti
1330]
gi|426545392|emb|CCJ74578.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter condimenti
1330]
Length = 229
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + + L++RG ++ TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVEVKTHRTISDAVSHLKARGMQVLATHLSEKAVDFREVDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D +PM GMV S NVSVA+ ++++ A R A + L
Sbjct: 122 KTGITQEALDLADQDIIVPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRADSTLPET 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|345893382|ref|ZP_08844181.1| hypothetical protein HMPREF1022_02841 [Desulfovibrio sp.
6_1_46AFAA]
gi|345046299|gb|EGW50190.1| hypothetical protein HMPREF1022_02841 [Desulfovibrio sp.
6_1_46AFAA]
Length = 196
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R+ R + V+++R + LV+ + D NVSA +RS DA G+ VH+ ++ R
Sbjct: 9 RRARLLEVLRHRQNDLTLVLANIHDPHNVSAIYRSCDAFGLSKVHLYYTNTPFPT-LGRK 67
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
S A KW++ E + LR +G+++ T A + D+ PTA+++GNE+
Sbjct: 68 TSASARKWVESERHKNSADLMRTLRGQGFQVLATSCSKTARPLRAWDFIRPTAVIMGNEH 127
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSV 295
GV +E LSL+D + IPM GM+ SFNVSV
Sbjct: 128 SGVEEELLSLADGQLYIPMYGMIQSFNVSV 157
>gi|417945614|ref|ZP_12588845.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli XH140A]
gi|417976437|ref|ZP_12617230.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli XH001]
gi|342362685|gb|EGU26801.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli XH140A]
gi|344193860|gb|EGV47937.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli XH001]
Length = 229
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVVHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|442609376|ref|ZP_21024114.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441749133|emb|CCQ10176.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 233
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R R V+ R + + +E + N+SA R+ADA+G +H V +R
Sbjct: 1 MEENRFHRIKRVLDRRQTDLTVCLEEVHKHHNLSAIIRTADAVGCHYIHAVWPHDRRRTT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSR--GYRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ W++ +L + + +R G +I T++ A+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWVETKLHRSIEDAVVDMRETNPGLQILATNLSDKAVDFREIDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
+VG E G+SD+AL+L+D +PM+GMV S NVSVA ++++ A RA
Sbjct: 119 IVGQEKLGISDKALALADHHIVVPMEGMVQSLNVSVATALILYEAQRQRA 168
>gi|387826975|ref|YP_005806257.1| putative tRNA/rRNA methyltransferase [Borrelia burgdorferi N40]
gi|312149761|gb|ADQ29832.1| putative tRNA/rRNA methyltransferase [Borrelia burgdorferi N40]
Length = 218
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+ LS ++ +E+K R V+ R+ + V+E + N SAT R+ + LG+ VHV+
Sbjct: 9 IGVLSKFITDEKKARIEKVLSLRTNYLTFVLEDIFQSQNASATIRTGEILGLSDVHVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ ++ N V++G+ +W+++ + + + L+S GY I T + +I++ ++ +
Sbjct: 67 EKKNKHTLNPDVTLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLNPKSINLENLTIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
AI G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAIFFGTELTGLSAEVLGAADLYVKIPMYGFTQSYNISVAVAIVMY 174
>gi|345297276|ref|YP_004826634.1| tRNA/rRNA methyltransferase SpoU [Enterobacter asburiae LF7a]
gi|345091213|gb|AEN62849.1| tRNA/rRNA methyltransferase (SpoU) [Enterobacter asburiae LF7a]
Length = 229
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGS--RMRNMV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E + L+ RG ++ T++ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVSVKNHQTIGEAVSHLKGRGMQVLATNLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S EAL L+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGISQEALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYKRSNSMLPED 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|238797645|ref|ZP_04641141.1| tRNA guanosine-2'-O-methyltransferase [Yersinia mollaretii ATCC
43969]
gi|238718509|gb|EEQ10329.1| tRNA guanosine-2'-O-methyltransferase [Yersinia mollaretii ATCC
43969]
Length = 233
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ VH + + R +
Sbjct: 4 QRYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPSTEMYTRLS- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+S+G +I TH+ A+ ++D++ PT I++G E
Sbjct: 63 -AAAGSNSWVQVKTHPHITDAIAHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S+EAL+L+D IPM GMV S NVSVA+ ++++ A R A L
Sbjct: 122 KTGISEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRAQSVLPLV 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRKETTHMP 356
E+Q LL E ++ + AKRK P
Sbjct: 182 EQQRLLFE-------GGYPVLAQVAKRKGLPQPP 208
>gi|194431220|ref|ZP_03063513.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae 1012]
gi|194420675|gb|EDX36751.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae 1012]
Length = 229
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVW--PGNRMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|163750719|ref|ZP_02157955.1| tRNA (guanosine-2'-O-)-methyltransferase [Shewanella benthica KT99]
gi|161329563|gb|EDQ00555.1| tRNA (guanosine-2'-O-)-methyltransferase [Shewanella benthica KT99]
Length = 231
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ NR + L ++ + N++A R+ADA+G+ +H V D R N
Sbjct: 4 ERLARINEMLDNRQPDLTLCLDKVHKTNNIAAVIRTADAVGIHQIHAVWPDIEMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ + R++G +I T+ +A+ ++D++ PTAI++GNE
Sbjct: 63 -TASGSQQWVKTIKHYHMHDAEAAFRAQGMQILATNFSKEAVDFREIDYTRPTAIILGNE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ GVS E ++ +D IPM GMV S NVSVA+ ++M+ A R
Sbjct: 122 HDGVSAEGIAAADQHIIIPMIGMVQSLNVSVASALIMYEAQRQR 165
>gi|359689507|ref|ZP_09259508.1| tRNA (guanosine-2'-O-)-methyltransferase [Leptospira licerasiae
serovar Varillal str. MMD0835]
gi|418749734|ref|ZP_13306022.1| RNA methyltransferase, TrmH family [Leptospira licerasiae str.
MMD4847]
gi|418759022|ref|ZP_13315202.1| RNA methyltransferase, TrmH family [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384113513|gb|EID99777.1| RNA methyltransferase, TrmH family [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404274619|gb|EJZ41937.1| RNA methyltransferase, TrmH family [Leptospira licerasiae str.
MMD4847]
Length = 246
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 11/187 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
E+ + V R+ + +V+E + N SA R+++ LG+ +HVV ++ YR N
Sbjct: 30 EKVSKIQEVASFRTKYLTIVMEDIFQPYNASAPVRTSECLGLTEIHVV--ENRNPYRPNE 87
Query: 205 HVSMGAEKWLDIELWDAP-----RECFNVLRSRGYRIATT--HVGMDAISVYDMDWSCPT 257
+S+GA+KW+ I + P R C + L+ +GYR+ T H ++ + + P
Sbjct: 88 GISLGAQKWIQIHKYQKPNIDNTRHCISGLKEKGYRVVATSPHTLANSYELNTLPLDKPC 147
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
AI+ G+E +G+S ++ +D+ +PM G +S+N+SV I++ H + R + V N
Sbjct: 148 AILFGSEEKGLSSYSMEEADVFLKLPMYGFTESYNISVTVAIVLSH-LAFRLRKEVP-NW 205
Query: 318 DLTSEEK 324
LT EEK
Sbjct: 206 GLTEEEK 212
>gi|238764307|ref|ZP_04625258.1| tRNA guanosine-2'-O-methyltransferase [Yersinia kristensenii ATCC
33638]
gi|238697458|gb|EEP90224.1| tRNA guanosine-2'-O-methyltransferase [Yersinia kristensenii ATCC
33638]
Length = 231
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ +H + R +
Sbjct: 4 QRYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGIHQIHAIWPTPEMYTRLSS 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E L+S+G +I TH+ A+ ++D++ PT I++G E
Sbjct: 64 --AAGSNSWVQVKTHSDITEAITHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S EAL+++D IPM GMV S NVSVA+ ++++ A R A L+ +
Sbjct: 122 KTGISKEALAMADKDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYRRTQSVLSED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAQVAKRK 202
>gi|219685293|ref|ZP_03540112.1| tRNA/rRNA methyltransferase [Borrelia garinii Far04]
gi|219673066|gb|EED30086.1| tRNA/rRNA methyltransferase [Borrelia garinii Far04]
Length = 218
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 6/170 (3%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E LS ++ +++K R V+ R+ + V+E + N SAT R+ + LG+ VH++S
Sbjct: 9 IEVLSEFITDKKKARIEEVLSCRTNYLTFVLEDIFQPQNASATIRTGEILGLSDVHIIS- 67
Query: 195 DSSKRYR--ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
KR + N V++G+ +W+++ ++ + + L+S GY I T + +I++ D
Sbjct: 68 ---KRNKCTLNPDVTLGSSQWINLNRYNNTKFALDRLKSDGYSIVATSLDEQSINLEDFP 124
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
+ A+ G E G+S EA +DL IPM G S+N+SVA I+M+
Sbjct: 125 INNKMAVFFGTELTGLSAEAFEAADLYLKIPMHGFTQSYNISVAVAIVMY 174
>gi|436611986|ref|ZP_20513927.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434969283|gb|ELL61995.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
Length = 229
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHSIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVAFALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|432566043|ref|ZP_19802599.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE51]
gi|431089611|gb|ELD95417.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE51]
Length = 229
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R +
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSQMRTMAS-- 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|300815109|ref|ZP_07095334.1| RNA methyltransferase, TrmH family [Escherichia coli MS 107-1]
gi|415873324|ref|ZP_11540579.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli MS 79-10]
gi|300532001|gb|EFK53063.1| RNA methyltransferase, TrmH family [Escherichia coli MS 107-1]
gi|342930935|gb|EGU99657.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli MS 79-10]
Length = 218
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ RG +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D
Sbjct: 66 RTIGDAVAHLKGRGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + N L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 GGYPVLAKVAKRK 191
>gi|421786260|ref|ZP_16222669.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica A30]
gi|407751606|gb|EKF61780.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica A30]
Length = 220
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 6/173 (3%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VCL E + NVSA R+ADA+GV VH V S R R + G+ W++++
Sbjct: 10 TVCL--EQVHKPHNVSAIIRTADAVGVHQVHAVWPTS--RMRTLVSSAAGSNSWVNVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ +G +I TH+ A+ ++D++ PT +++G E G+++EAL+L+D
Sbjct: 66 RTISDAVTHLKDQGMQILATHLSARAVDFREVDYTRPTCVLLGQEKTGITEEALALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R A + L EE+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRHNAGMYLRTRSALDEEEQQRLLFE 178
>gi|366161290|ref|ZP_09461152.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. TW09308]
gi|432374379|ref|ZP_19617410.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE11]
gi|430893801|gb|ELC16125.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE11]
Length = 229
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALELADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|293393635|ref|ZP_06637945.1| tRNA guanosine-2'-O-methyltransferase [Serratia odorifera DSM 4582]
gi|291423970|gb|EFE97189.1| tRNA guanosine-2'-O-methyltransferase [Serratia odorifera DSM 4582]
Length = 220
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 10/175 (5%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VCL E + NVSA R+ADA+GV VH V + R R + G+ W++++
Sbjct: 10 TVCL--EQVHKPHNVSAIIRTADAVGVHQVHAVW--PTTRMRTLVSSAAGSNSWVNVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
E L+S+G +I T++ A+ D+D++ PT I++G E G+S+EAL L+D
Sbjct: 66 RTIGEAVGHLKSQGMQILATNLSARAVDFRDIDYTRPTCILLGQEKSGISEEALQLADRD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R + G L EE+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEA--QRQRQNAGMYRREASTLEQEEQQRLLFE 178
>gi|188025415|ref|ZP_02958530.2| hypothetical protein PROSTU_00272 [Providencia stuartii ATCC 25827]
gi|188023696|gb|EDU61736.1| RNA methyltransferase, TrmH family [Providencia stuartii ATCC
25827]
Length = 226
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 17/195 (8%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
++CL E + NVSA RSADA+G+ ++H + D ++ + + + G+ W+++
Sbjct: 10 TICL--EEVHKPHNVSAIVRSADAVGIHTIHAIWPD--QQVKLSVSSAAGSNSWVNVISH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ + L+S+ ++ TH+ A+ ++D++ PT I+VG E +G+S +AL L+D
Sbjct: 66 PSTEAAISQLKSQNMQVLVTHLSEQAVDFREIDYTQPTCIMVGQEKKGISAKALELADKH 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDLTSEEKQILLAEFSLRH 335
IPM GMV S NVSVA+ ++++ A R +L G L+ +E+Q L E
Sbjct: 126 IIIPMVGMVQSLNVSVASALILYEA--QRQRQLAGMYSRETSLLSEQEQQQWLFE----- 178
Query: 336 SKSAISIVHEYAKRK 350
++ E AKRK
Sbjct: 179 --GGYPVLAEVAKRK 191
>gi|195941791|ref|ZP_03087173.1| spoU protein (spoU) [Borrelia burgdorferi 80a]
Length = 218
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+ LS ++ +E+K R V+ R+ + V+E + N SAT R+ + LG+ VHV+
Sbjct: 9 IGVLSKFITDEKKARIEKVLSFRTNYLTFVLEDIFQSQNASATIRTGEILGLSDVHVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ ++ N V++G+ +W+++ + + + L+S GY I T + +I++ ++ +
Sbjct: 67 EKKNKHTLNPDVTLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLNPKSINLENLTIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
AI G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAIFFGAELTGLSAEVLGAADLYVKIPMYGFTQSYNISVAVAIVMY 174
>gi|419020723|ref|ZP_13568020.1| spoU rRNA Methylase family protein [Escherichia coli DEC1E]
gi|377856684|gb|EHU21543.1| spoU rRNA Methylase family protein [Escherichia coli DEC1E]
Length = 206
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V S R R + G+ W+ ++ + L+ +
Sbjct: 9 NVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQ 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TTH+ +A+ ++D++ PT I++G E G++ EAL+L+D IPM GMV S N
Sbjct: 67 GMQILTTHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPETEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|331649465|ref|ZP_08350551.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli M605]
gi|417664239|ref|ZP_12313819.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Escherichia coli AA86]
gi|330909712|gb|EGH38226.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Escherichia coli AA86]
gi|331041963|gb|EGI14107.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli M605]
Length = 229
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR--LVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNTGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|226320776|ref|ZP_03796332.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 29805]
gi|226233831|gb|EEH32556.1| tRNA/rRNA methyltransferase [Borrelia burgdorferi 29805]
Length = 218
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+ LS ++ +E+K R V+ R+ + V+E + N SAT R+ + LG+ VHV+
Sbjct: 9 IGVLSKFITDEKKARIEKVLSLRTNYLTFVLEDIFQSQNASATIRTGEILGLSDVHVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ ++ N V++G+ +W+++ + + + L+S GY I T + +I++ ++ +
Sbjct: 67 EKKNKHTLNPDVTLGSSQWINLNKYRNAKFAIDRLKSDGYSIVATSLNPKSINLENLTIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
AI G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAIFFGTELTGLSAEVLGAADLYVKIPMYGFTQSYNISVAVAIVMY 174
>gi|238784018|ref|ZP_04628034.1| tRNA guanosine-2'-O-methyltransferase [Yersinia bercovieri ATCC
43970]
gi|238715126|gb|EEQ07122.1| tRNA guanosine-2'-O-methyltransferase [Yersinia bercovieri ATCC
43970]
Length = 230
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ VH + + R +
Sbjct: 4 QRYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTEMYTRLSS 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+S+G +I TH+ A+ ++D++ PT I++G E
Sbjct: 64 --AAGSNSWVQVKTHPHITDAIAHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G+S+EAL+L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KTGISEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165
>gi|308047831|ref|YP_003911397.1| tRNA guanosine-2'-O-methyltransferase [Ferrimonas balearica DSM
9799]
gi|307630021|gb|ADN74323.1| tRNA guanosine-2'-O-methyltransferase [Ferrimonas balearica DSM
9799]
Length = 235
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 6/188 (3%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ R + + +E + N+SA R+ADA+GV VH V R R
Sbjct: 4 ERLARINAMLDMRQPDLTICLEDVHKPHNLSAMIRTADAIGVPEVHAVFLGEDNRLRGG- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ + + + +R +G ++ T++ A+ +D++ PTAI++G E
Sbjct: 63 -TATGSQQWVKVNRHQSIGDAVARMREQGMQVIATNLSEKAVDFRSIDYTKPTAILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGD--LTSE 322
G+S EAL+L+D +PM GMV S NVSVA+ +L++ A R + G G L
Sbjct: 122 KTGISQEALALADHDVIVPMVGMVQSLNVSVASALLLYEA--QRQRQAAGMYGQRRLDEA 179
Query: 323 EKQILLAE 330
E Q LL E
Sbjct: 180 ECQRLLFE 187
>gi|254432253|ref|ZP_05045956.1| RNA methyltransferase, TrmH family, group 3 [Cyanobium sp. PCC
7001]
gi|197626706|gb|EDY39265.1| RNA methyltransferase, TrmH family, group 3 [Cyanobium sp. PCC
7001]
Length = 229
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ER V+ R + +++E + N+SA RS DA+GV H V R
Sbjct: 3 LLPRRFERLQAVLNRRMADLTVLLEHVEKPHNLSAILRSCDAVGVLEAHAVCLKG--RLP 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + + LR +G+R+ TH+ +A+ D++ PTA V+
Sbjct: 61 TFNSTAQGSQKWVPLHRHPSAAAALQSLREQGFRLYGTHLSAEAVDYRSCDFTGPTAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR-ATRLVGCNGD-L 319
G E G+S E L D IPM GMV S NVSVA L+ A+ R A V G+ L
Sbjct: 121 GAEKWGLSPECAGLVDQAIVIPMSGMVQSLNVSVATATLLFEALRQRQAAGTVPSAGEGL 180
Query: 320 TSEEKQILLAEFS 332
E + LL E++
Sbjct: 181 APERYRALLFEWA 193
>gi|421685013|ref|ZP_16124790.1| spoU rRNA Methylase family protein [Shigella flexneri 1485-80]
gi|404334979|gb|EJZ61454.1| spoU rRNA Methylase family protein [Shigella flexneri 1485-80]
Length = 206
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V S R R + G+ W+ ++ + L+ +
Sbjct: 9 NVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQ 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TTH+ +A+ ++D++ PT I++G E G++ EAL+L+D IPM GMV S N
Sbjct: 67 GMQILTTHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|161505720|ref|YP_001572832.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160867067|gb|ABX23690.1| hypothetical protein SARI_03896 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 218
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++ R + + +E + NVSA R+ADA+GV VH V S R R + G+
Sbjct: 1 MLARRQPDLTICMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNS 58
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E G++ EA
Sbjct: 59 WVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEA 118
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAE 330
L L+D IPM GMV S NVSVA+ ++++ A R A + N L +E+Q LL E
Sbjct: 119 LDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEDEQQRLLFE 178
Query: 331 FSLRHSKSAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 -------GGYPVLAKVAKRK 191
>gi|294142851|ref|YP_003558829.1| tRNA (guanosine-2'-O-)-methyltransferase [Shewanella violacea
DSS12]
gi|32562924|dbj|BAC79237.1| tRNA (guanosine-2'-O-)-methyltransferase [Shewanella violacea]
gi|293329320|dbj|BAJ04051.1| tRNA (guanosine-2'-O-)-methyltransferase [Shewanella violacea
DSS12]
Length = 232
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 4/173 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ NR + L ++ + N++A R+ADA+G+ VH V D R N
Sbjct: 4 ERLARINEMLDNRQPDLTLCLDRVHKTNNIAAVIRTADAVGIHQVHAVWPDIEMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ + R++ +I T+ DA+ ++D++ PT I++GNE
Sbjct: 63 -TASGSQQWVKTIKHYHMDDAVQAFRAQDMQILATNFSADAVDFREIDYTRPTVIILGNE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
+ GVS E ++ +D IPM GMV S NVSVA+ ++M+ A R ++ G G
Sbjct: 122 HDGVSPEGIAAADQHIIIPMIGMVQSLNVSVASALIMYEA--QRQRQVAGMYG 172
>gi|422006605|ref|ZP_16353594.1| tRNA guanosine-2'-O-methyltransferase [Providencia rettgeri Dmel1]
gi|414098821|gb|EKT60466.1| tRNA guanosine-2'-O-methyltransferase [Providencia rettgeri Dmel1]
Length = 237
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 11/209 (5%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E R R ++ R + L +E + NVSA RSADA+G+ +H + D ++ + +
Sbjct: 3 ERRYRRICQMMAMRQPDLTLCLEEIHKPHNVSAIVRSADAVGIHQIHAIWPD--QQVKLS 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+ G+ W+ I + E + ++S+ ++ T++ A+ ++D++ PT I++G
Sbjct: 61 VSSAAGSNSWVKIISHTSTEEAISQIKSQNMQVLATNLSEHAVDFREIDYTLPTCIMMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTS 321
E G+S +AL+L+D IPM GMV S NVSVA+ ++++ A R A+ + L+
Sbjct: 121 EKTGISQQALALADKHIIIPMAGMVQSLNVSVASALILYEAQRQRQQASMYEREHCLLSP 180
Query: 322 EEKQILLAEFSLRHSKSAISIVHEYAKRK 350
+E+Q L E ++ E AKRK
Sbjct: 181 DEQQTWLFE-------GGYPVLAEVAKRK 202
>gi|123440446|ref|YP_001004440.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|418243496|ref|ZP_12869972.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|420261066|ref|ZP_14763726.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. enterocolitica WA-314]
gi|122087407|emb|CAL10188.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|351777039|gb|EHB19291.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|404511570|gb|EKA25445.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. enterocolitica WA-314]
Length = 230
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ +H + + R +
Sbjct: 4 QRYARICEMLATRQPDLTVCLEEVHKPHNVSAIIRTADAVGIHQIHAIWPTPAMYTRLSS 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+S+G +I TH+ A+ ++D++ PT I++G E
Sbjct: 64 --AAGSNSWVQVKTHSHITDAITHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S EAL+++D IPM GMV S NVSVA+ ++++ A R A L+ +
Sbjct: 122 KTGISKEALAMADKDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRTQSVLSED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAQVAKRK 202
>gi|418514662|ref|ZP_13080860.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366078390|gb|EHN42392.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 229
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R +
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSWMRTMAS- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 63 -AAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|300775607|ref|ZP_07085468.1| tRNA/rRNA methyltransferase [Chryseobacterium gleum ATCC 35910]
gi|300505634|gb|EFK36771.1| tRNA/rRNA methyltransferase [Chryseobacterium gleum ATCC 35910]
Length = 226
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 6/196 (3%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
S+ E L +L EER + + K S V VVE + F N +A RS +A G V
Sbjct: 7 SQTYEYLKQFLTEERLTKIEHFSKESSDFVLPVVEDVYQFRNAAAIVRSVEACGFHKV-- 64
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
V+ + N V+ GA+ W+++E E F ++ R Y+I + +A + +
Sbjct: 65 VALQEEYSFEPNLRVTKGADTWVEVEKLPRNMESFQNIKDRRYKIVAVSLEKNAKMLPEY 124
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+ + P A+V G E GVS E L +D +IPM G SFNVSVAA I M+ + +
Sbjct: 125 EVTEPIALVFGTEMEGVSQEILDFADETLAIPMYGFTRSFNVSVAASICMY----ELKQK 180
Query: 312 LVGCNGDLTSEEKQIL 327
L+ + D E+++L
Sbjct: 181 LIKSDIDYKLNEEKLL 196
>gi|453065735|gb|EMF06695.1| tRNA guanosine-2'-O-methyltransferase [Serratia marcescens VGH107]
Length = 231
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ R + + +E + NVSA R+ADA+GV VH V + R R
Sbjct: 4 ERYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGVHQVHAVW--PTTRMRTLV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+++G +I T++ A+ ++D++ PT +++G E
Sbjct: 62 SSAAGSNSWVSVKTHRTIGDAVGHLKAQGMQILATNLSARAVDFREVDYTRPTCVLLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDLT 320
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R + G N L
Sbjct: 122 KTGITEEALALADQDIVIPMIGMVQSLNVSVASALILYEA--QRQRQNAGLYRRDNSMLD 179
Query: 321 SEEKQILLAE 330
EE+Q LL E
Sbjct: 180 EEEQQRLLFE 189
>gi|432590114|ref|ZP_19826465.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE58]
gi|431117626|gb|ELE20854.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE58]
Length = 229
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDSVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GM S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMAQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|440285574|ref|YP_007338339.1| rRNA methylase [Enterobacteriaceae bacterium strain FGI 57]
gi|440045096|gb|AGB76154.1| rRNA methylase [Enterobacteriaceae bacterium strain FGI 57]
Length = 229
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 KRYARIREMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ E + L+ RG ++ T++ A+ ++D++ PT I++G E
Sbjct: 62 STAAGSNSWVSVKTHPTIGEAVSHLKGRGMQVLATNLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A N L +
Sbjct: 122 KTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRENSMLPDD 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|419280642|ref|ZP_13822879.1| spoU rRNA Methylase family protein [Escherichia coli DEC10E]
gi|378123744|gb|EHW85161.1| spoU rRNA Methylase family protein [Escherichia coli DEC10E]
Length = 206
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V S R R + G+ W+ ++ + L+ R
Sbjct: 9 NVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGR 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D IPM GMV S N
Sbjct: 67 GMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|284008963|emb|CBA75850.1| tRNA (guanosine-2'-O-)-methyltransferase [Arsenophonus nasoniae]
Length = 225
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VCL E + N+SA R+ADA+G+ +H + C +S + + G+ W+ ++
Sbjct: 7 TVCL--ENVHKPHNISAVIRTADAVGISQIHAIWCQNSTKSLSA--AAAGSNHWVKVKTH 62
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ + ++ G +I H+ AI +D++ PT I++G E G+S +AL+L+D
Sbjct: 63 ATIEKAISTCKAAGMQILAAHLTKQAIDFRQIDYTQPTCIILGQERTGISKQALALADHN 122
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R A L+ EE+Q L E
Sbjct: 123 IHIPMMGMVQSLNVSVASALILYEAQRQRQNANMYNSLFSQLSEEEQQEWLFE 175
>gi|67923985|ref|ZP_00517438.1| tRNA (guanosine-2'-O-)-methyltransferase [Crocosphaera watsonii WH
8501]
gi|416404859|ref|ZP_11687788.1| rRNA methylase SpoU [Crocosphaera watsonii WH 0003]
gi|67854160|gb|EAM49466.1| tRNA (guanosine-2'-O-)-methyltransferase [Crocosphaera watsonii WH
8501]
gi|357261441|gb|EHJ10708.1| rRNA methylase SpoU [Crocosphaera watsonii WH 0003]
Length = 216
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R R V++ R + ++ E + N+SA R+ DA+G+ VH S +++ +
Sbjct: 3 VLPRRYHRIKQVLEKRQPDLTVLTEDVHKPHNLSAIIRTCDAVGILDVH--SINTTDEFP 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
VS G++KW + + L+S+ I H ++ D+D++ PTAI++
Sbjct: 61 TFSQVSQGSDKWTFLHTHPDIKTAITYLKSKKINIYAAHFTEKSLDYRDIDYTQPTAILL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
G E GVS+EA +L D IPM GMV S NVSVAA +++ A R + L
Sbjct: 121 GAEKWGVSEEAANLVDGNIIIPMLGMVQSLNVSVAAAVILFEAQRQRLAGKMYDTSRLDP 180
Query: 322 EEKQILLAEFS 332
E +L E+S
Sbjct: 181 ERYHKILFEWS 191
>gi|422836173|ref|ZP_16884222.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E101]
gi|432950328|ref|ZP_20144617.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE196]
gi|371609734|gb|EHN98268.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E101]
gi|431452634|gb|ELH33046.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE196]
Length = 218
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ +G +I TH+ +A+ ++D++ PT I++G E G+++EAL+L+D
Sbjct: 66 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITEEALALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + N L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 GGYPVLAKVAKRK 191
>gi|417488336|ref|ZP_12172711.1| tRNA-methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353632187|gb|EHC79314.1| tRNA-methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
Length = 178
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A
Sbjct: 122 KTGITQEALALADRDIIIPMIGMVQSLNVSVASALILYEA 161
>gi|238918012|ref|YP_002931526.1| RNA methyltransferase, TrmH family [Edwardsiella ictaluri 93-146]
gi|238867580|gb|ACR67291.1| RNA methyltransferase, TrmH family [Edwardsiella ictaluri 93-146]
Length = 230
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + NVSA R+ADA+GV VH V S R
Sbjct: 1 MTPQRYARICQMMAARQPDLTVCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPGKSMRTL 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ + G+ W+ ++ L+ +G +I T++ A+ ++D++ PT I++
Sbjct: 61 VS--TAAGSNSWVSVKTHRDIAAAVGELKGQGMQILATNLSATAVDFREIDYTRPTCILM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG---- 317
G E RG+S EAL L+D IPM GMV S NVSVA+ ++++ A R + G G
Sbjct: 119 GQEKRGISAEALQLADRDIIIPMVGMVQSLNVSVASALILYEA--QRQRQQAGMYGRSQP 176
Query: 318 DLTSEEKQILLAE 330
L E++Q LL E
Sbjct: 177 SLNEEQQQRLLWE 189
>gi|384430458|ref|YP_005639818.1| tRNA guanosine-2'-O-methyltransferase [Thermus thermophilus
SG0.5JP17-16]
gi|333965926|gb|AEG32691.1| tRNA guanosine-2'-O-methyltransferase [Thermus thermophilus
SG0.5JP17-16]
Length = 194
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRYRENRHVSMGAE 211
V++ R + +++E + N+SA R+ DA+GV H V+ + E S G+
Sbjct: 15 VLRKRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNET---SGGSH 71
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
KW+ + + RE F LR+R +R+ T + DA ++D++ PT +++G E GVS+E
Sbjct: 72 KWVYLRVHPDIREAFRHLRARDFRVYATALREDAQDFREVDYTKPTCVLLGAEKWGVSEE 131
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
AL+L+D IPM GMV S NVSVAA +++ A R
Sbjct: 132 ALALADGAIKIPMLGMVQSLNVSVAAAVILFEAQRQR 168
>gi|365877121|ref|ZP_09416626.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis Ag1]
gi|442587955|ref|ZP_21006769.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis R26]
gi|365754981|gb|EHM96915.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis Ag1]
gi|442562454|gb|ELR79675.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis R26]
Length = 227
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
+V E + +L EER + + S V V+E + F N +A RS +A G +
Sbjct: 7 QDVYEYMKGFLTEERLFKIDKYAEESSDFVLPVLENIYQFRNAAAIIRSVEACGFHKI-- 64
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
V+ + + N V+ GA+ W+ +E +R +GY+I +A+S+ +
Sbjct: 65 VALEEENVFNPNTRVARGADTWMQVEKMPKTMASLQQIRDKGYKILAVSPEKNAVSLPEY 124
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+ P A++ G E GVS E L +D IPM G SFNVSVAA I M+ + +
Sbjct: 125 ELKEPVALIFGTEMEGVSQEVLDFADETLIIPMYGFTQSFNVSVAAAICMY----ELKQK 180
Query: 312 LVGCNGD--LTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
L+ + D L+ ++K + +++ ++S +++ Y K+
Sbjct: 181 LLKSDIDYKLSDDKKLAMKIRWAVNSTRSGDEVLNHYLKK 220
>gi|455737774|ref|YP_007504040.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Morganella morganii
subsp. morganii KT]
gi|455419337|gb|AGG29667.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Morganella morganii
subsp. morganii KT]
Length = 217
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDI 216
R + L +E + NVSA RSADA+G+ +H V + K + + G+ W+++
Sbjct: 2 RQPDLTLCLEEVHKPHNVSAVIRSADAVGIHDLHAVWPEKIKTLVSS---AAGSNSWVNV 58
Query: 217 ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLS 276
D +L+S+G +I TH+ A+ +D++ PT I++G+E G+S EA+ L+
Sbjct: 59 HNHDTLAGAVTLLKSQGMQILATHLSDSAVDFRAIDFTRPTCIIMGSEKTGISQEAIRLA 118
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D IPM GMV S NVSVAA ++++ A R
Sbjct: 119 DQHIMIPMSGMVQSLNVSVAAAVILYEAQRQR 150
>gi|258406290|ref|YP_003199032.1| tRNA guanosine-2'-O-methyltransferase [Desulfohalobium retbaense
DSM 5692]
gi|257798517|gb|ACV69454.1| tRNA guanosine-2'-O-methyltransferase [Desulfohalobium retbaense
DSM 5692]
Length = 202
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E R++R V+ R + LV+ + D NV+A RS DA GV VH++ S
Sbjct: 13 EAREKRIREVLARRQKDLTLVMNNIHDPHNVAAIMRSCDAFGVPDVHLLYT-SEAFPALG 71
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
R S A KW+ + LR G RI +T A + + +++ PTAIV+GN
Sbjct: 72 RRASASARKWVGRHHHTSSEALAGHLRDHGMRILSTSCSPSARPLPEWEFTSPTAIVLGN 131
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
E+RGV S D IPM+GMV SFNVSVAA I+++ A R
Sbjct: 132 EHRGVDPALRSHIDGELFIPMQGMVQSFNVSVAAAIILYEAWRQR 176
>gi|149908558|ref|ZP_01897220.1| tRNA (guanosine-2'-O-)-methyltransferase [Moritella sp. PE36]
gi|149808392|gb|EDM68329.1| tRNA (guanosine-2'-O-)-methyltransferase [Moritella sp. PE36]
Length = 228
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER ER ++++R + + +E + N++A R+ DA+GV +VH V S + +
Sbjct: 1 MTPERLERITKMLQHRQPDLTVCMESVHKPHNLAAVVRTCDAVGVNNVHAVW--SIRPTK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ + G++ W+ + D L+++G ++ T++ A+ D+D++ PTAI++
Sbjct: 59 VSGGTATGSQNWVKVHSHDNIAAAIKELKAQGMQVLATNLSDTAVDFRDIDYTKPTAILM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E G+S EAL+L+D IPM GMV S NVSVA +++ A R
Sbjct: 119 GQEKTGISAEALALADQDIIIPMVGMVQSLNVSVATATILYEAQRQR 165
>gi|392546692|ref|ZP_10293829.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas rubra ATCC
29570]
Length = 232
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R +R ++ R + + ++ + N+SA R+ADA+G VH V +R
Sbjct: 1 MEENRFQRVKRILDQRQTDLTVCLDEVHKHHNLSAIVRTADAVGCHHVHAVWPQEQRRLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSR--GYRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ W++ + D + +R++ G ++ T++ A+ ++D++ PTA+
Sbjct: 61 NN--TSGGSKNWVETHMHDDIDQAVATIRAQNPGIQLLATNLSDTAVDFREIDYTKPTAV 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+VG E G+SD AL +D IPM GMV S NVSVAA ++++ A
Sbjct: 119 IVGQERLGISDRALEHADQHIVIPMAGMVQSLNVSVAAALILYEA 163
>gi|213609646|ref|ZP_03369472.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 184
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIDDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQ 325
E+Q
Sbjct: 182 EQQ 184
>gi|375003604|ref|ZP_09727943.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353074519|gb|EHB40280.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 218
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 101/193 (52%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH + S R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMASAAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ RG +I TH+ A+ ++D++ PT I++G E G++ EAL L+D
Sbjct: 66 RTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + N L +E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEDEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 GGYPVLAKVAKRK 191
>gi|375121221|ref|ZP_09766388.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326625488|gb|EGE31833.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
Length = 206
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH + S R R + G+ W+ ++ + L+ R
Sbjct: 9 NVSAIIRTADAVGVHEVHAIWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGR 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TH+ A+ ++D++ PT I++G E G++ EAL+L+D IPM GMV S N
Sbjct: 67 GMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L +E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPEDEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|327405561|ref|YP_004346399.1| tRNA/rRNA methyltransferase SpoU [Fluviicola taffensis DSM 16823]
gi|327321069|gb|AEA45561.1| tRNA/rRNA methyltransferase (SpoU) [Fluviicola taffensis DSM 16823]
Length = 225
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 7/175 (4%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
+E+++A + E + + F V R+ + +++E + N SA RS D G+Q +HV
Sbjct: 3 NELLQAFYELIPEVKGQMFDEVASMRTRHLTVLLEEIFQEHNASAVIRSCDCFGIQELHV 62
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELW-DAPR---ECFNVLRSRGYRIATTHVGMDAIS 247
V +S +Y+ R ++ GA +W+D+ + + P + N L+S+GY+IA + S
Sbjct: 63 V--ESKNKYKVQRDIARGAGRWVDLFNYNEGPTPLLDAVNKLKSKGYKIAALTPDAEH-S 119
Query: 248 VYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
++D+ P A+ G E G+SDE ++D + SIPM G +SFNVSV+ + +
Sbjct: 120 IFDLPLDQPVALSFGTEWEGISDEIREIADYKVSIPMVGFTESFNVSVSVALTLQ 174
>gi|381189778|ref|ZP_09897303.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus sp. RL]
gi|380452355|gb|EIA39954.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus sp. RL]
Length = 194
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRYRENRHVSMGAE 211
V++ R + +++E + N+SA R+ DA+GV H V+ + E S G+
Sbjct: 15 VLRKRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNET---SGGSH 71
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
KW+ + + RE F LR+R +R+ T + DA ++D++ PT +++G E GVS+E
Sbjct: 72 KWVYLRVHPDIREAFRHLRARDFRVYATALREDAQDFREVDYTKPTCVLLGAEKWGVSEE 131
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
AL+L+D IPM GMV S NVSVAA +++ A R
Sbjct: 132 ALALADGAIKIPMLGMVQSLNVSVAAAVILFEAHXHR 168
>gi|415800551|ref|ZP_11499293.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli E128010]
gi|323160738|gb|EFZ46674.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli E128010]
Length = 229
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYAHICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|56415633|ref|YP_152708.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197364560|ref|YP_002144197.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56129890|gb|AAV79396.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197096037|emb|CAR61624.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 229
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 KRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ R +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTIGDAVAHLKGREMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N L +
Sbjct: 122 KTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|340001247|ref|YP_004732131.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella bongori NCTC
12419]
gi|339514609|emb|CCC32375.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella bongori NCTC
12419]
Length = 229
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 QRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMA 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ R ++ TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRTISDAVAHLKGREMQVLATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L
Sbjct: 122 KTGITQEALNLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEA 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAKVAKRK 202
>gi|300939291|ref|ZP_07153965.1| RNA methyltransferase, TrmH family [Escherichia coli MS 21-1]
gi|300455798|gb|EFK19291.1| RNA methyltransferase, TrmH family [Escherichia coli MS 21-1]
Length = 218
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 13/194 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ +G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D
Sbjct: 66 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + N L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRKE 351
++ + AKRK+
Sbjct: 179 GGYPVLAKVAKRKD 192
>gi|338732522|ref|YP_004670995.1| putative tRNA/rRNA methyltransferase [Simkania negevensis Z]
gi|336481905|emb|CCB88504.1| putative tRNA/rRNA methyltransferase BB_0052 [Simkania negevensis
Z]
Length = 220
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 17/225 (7%)
Query: 127 VYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGV 186
+ S +++EALS +L EERK R V++ R V + +E +D N A R+ +ALGV
Sbjct: 8 IKFSPKKIIEALSIFLTEERKVRIDQVLEKRVKGVQVALEAPADIHNALAVTRTGEALGV 67
Query: 187 QSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDA- 245
H++ K + + G+ +W I L+ V RS+ +D
Sbjct: 68 YQFHLIDAQLVKG--QGKATMRGSSRW--IHLYR--HNTLEVFRSKMKGFILAGASLDGE 121
Query: 246 ISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
+++ ++ P ++ GNE +G++ EA ++ DL IPM GMV+SFN+SV+AG+ ++ +
Sbjct: 122 LTLEELPKDRPLCLLFGNERKGLTSEAKAMCDLLYHIPMVGMVESFNLSVSAGLSLYQMM 181
Query: 306 CDRATRLVGCNGDLTSEEKQILLAEFSLRHSKS-AISIVHEYAKR 349
+ GDL EE+ L E + +++S I + H+ +R
Sbjct: 182 RGK------TEGDLNHEEQ---LEEKARYYARSIGIKVAHDILQR 217
>gi|227883841|ref|ZP_04001646.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 83972]
gi|300919781|ref|ZP_07136256.1| RNA methyltransferase, TrmH family [Escherichia coli MS 115-1]
gi|300950017|ref|ZP_07163967.1| RNA methyltransferase, TrmH family [Escherichia coli MS 116-1]
gi|300955360|ref|ZP_07167739.1| RNA methyltransferase, TrmH family [Escherichia coli MS 175-1]
gi|300984896|ref|ZP_07177184.1| RNA methyltransferase, TrmH family [Escherichia coli MS 45-1]
gi|301047441|ref|ZP_07194520.1| RNA methyltransferase, TrmH family [Escherichia coli MS 185-1]
gi|301644318|ref|ZP_07244320.1| RNA methyltransferase, TrmH family [Escherichia coli MS 146-1]
gi|422360751|ref|ZP_16441380.1| RNA methyltransferase, TrmH family [Escherichia coli MS 110-3]
gi|422364335|ref|ZP_16444853.1| RNA methyltransferase, TrmH family [Escherichia coli MS 153-1]
gi|422371261|ref|ZP_16451642.1| RNA methyltransferase, TrmH family [Escherichia coli MS 16-3]
gi|422380676|ref|ZP_16460850.1| RNA methyltransferase, TrmH family [Escherichia coli MS 57-2]
gi|432399600|ref|ZP_19642373.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE25]
gi|432433874|ref|ZP_19676297.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE187]
gi|432458785|ref|ZP_19700959.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE201]
gi|432497780|ref|ZP_19739571.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE214]
gi|432506535|ref|ZP_19748253.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE220]
gi|432526012|ref|ZP_19763127.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE230]
gi|432599917|ref|ZP_19836186.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE62]
gi|432605082|ref|ZP_19841291.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE67]
gi|432653256|ref|ZP_19889000.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE87]
gi|432734415|ref|ZP_19969237.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE45]
gi|432761500|ref|ZP_19995988.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE46]
gi|432785629|ref|ZP_20019805.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE63]
gi|432803854|ref|ZP_20037805.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE84]
gi|432891205|ref|ZP_20103963.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE165]
gi|432901218|ref|ZP_20111330.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE192]
gi|432975867|ref|ZP_20164699.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE209]
gi|432997426|ref|ZP_20186006.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE218]
gi|433002022|ref|ZP_20190539.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE223]
gi|433007246|ref|ZP_20195668.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE227]
gi|433030603|ref|ZP_20218449.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE109]
gi|433089370|ref|ZP_20275728.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE137]
gi|433127276|ref|ZP_20312817.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE160]
gi|433141350|ref|ZP_20326587.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE167]
gi|433151302|ref|ZP_20336298.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE174]
gi|433155839|ref|ZP_20340766.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE176]
gi|433209799|ref|ZP_20393462.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE97]
gi|227839119|gb|EEJ49585.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 83972]
gi|300300649|gb|EFJ57034.1| RNA methyltransferase, TrmH family [Escherichia coli MS 185-1]
gi|300317732|gb|EFJ67516.1| RNA methyltransferase, TrmH family [Escherichia coli MS 175-1]
gi|300408325|gb|EFJ91863.1| RNA methyltransferase, TrmH family [Escherichia coli MS 45-1]
gi|300413134|gb|EFJ96444.1| RNA methyltransferase, TrmH family [Escherichia coli MS 115-1]
gi|300450631|gb|EFK14251.1| RNA methyltransferase, TrmH family [Escherichia coli MS 116-1]
gi|301077356|gb|EFK92162.1| RNA methyltransferase, TrmH family [Escherichia coli MS 146-1]
gi|315285421|gb|EFU44866.1| RNA methyltransferase, TrmH family [Escherichia coli MS 110-3]
gi|315292920|gb|EFU52272.1| RNA methyltransferase, TrmH family [Escherichia coli MS 153-1]
gi|315296994|gb|EFU56274.1| RNA methyltransferase, TrmH family [Escherichia coli MS 16-3]
gi|324008107|gb|EGB77326.1| RNA methyltransferase, TrmH family [Escherichia coli MS 57-2]
gi|430912762|gb|ELC33934.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE25]
gi|430950144|gb|ELC69532.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE187]
gi|430979310|gb|ELC96095.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE201]
gi|431020788|gb|ELD34123.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE214]
gi|431035355|gb|ELD46745.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE220]
gi|431048306|gb|ELD58289.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE230]
gi|431127792|gb|ELE30086.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE62]
gi|431144104|gb|ELE45811.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE67]
gi|431187138|gb|ELE86652.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE87]
gi|431271028|gb|ELF62170.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE45]
gi|431305436|gb|ELF93759.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE46]
gi|431325951|gb|ELG13314.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE63]
gi|431345602|gb|ELG32518.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE84]
gi|431422259|gb|ELH04452.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE192]
gi|431430320|gb|ELH12152.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE165]
gi|431485533|gb|ELH65192.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE209]
gi|431502118|gb|ELH81010.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE218]
gi|431504294|gb|ELH82920.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE223]
gi|431509853|gb|ELH88101.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE227]
gi|431540235|gb|ELI15862.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE109]
gi|431600658|gb|ELI70325.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE137]
gi|431640152|gb|ELJ07913.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE160]
gi|431655773|gb|ELJ22803.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE167]
gi|431667093|gb|ELJ33685.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE174]
gi|431670270|gb|ELJ36624.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE176]
gi|431728079|gb|ELJ91800.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE97]
Length = 218
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ +G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D
Sbjct: 66 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + N L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 GGYPVLAKVAKRK 191
>gi|113475890|ref|YP_721951.1| tRNA/rRNA methyltransferase SpoU [Trichodesmium erythraeum IMS101]
gi|110166938|gb|ABG51478.1| tRNA/rRNA methyltransferase (SpoU) [Trichodesmium erythraeum
IMS101]
Length = 234
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 103/177 (58%), Gaps = 7/177 (3%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
+++ LS ++ R+E+ ++V++ R+ + +++E + N SA RS D+ GVQ VH+
Sbjct: 7 QQLITYLSQFITPARREKILSVLQQRTRDITVILEDIYQPHNASAVLRSCDSFGVQDVHI 66
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAP-----RECFNVLRSRGYRIATTHVGMDAI 246
V ++ + + V++G+++WL + ++ EC L++ GY IA T + I
Sbjct: 67 V--ENKNIFTITQSVTIGSDRWLTLYRYNEQSINNTEECLKRLKNEGYVIAATTPYKEHI 124
Query: 247 SVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
++ ++ + A++ G+E G+S+ A + +D+ IPM G +SFN+SV+A + +++
Sbjct: 125 TIEELSVNTKVALMFGSEINGLSEYAKNNADVSVKIPMVGFSESFNISVSAALCLYN 181
>gi|300822421|ref|ZP_07102561.1| RNA methyltransferase, TrmH family [Escherichia coli MS 119-7]
gi|300907694|ref|ZP_07125322.1| RNA methyltransferase, TrmH family [Escherichia coli MS 84-1]
gi|300923462|ref|ZP_07139502.1| RNA methyltransferase, TrmH family [Escherichia coli MS 182-1]
gi|300927918|ref|ZP_07143477.1| RNA methyltransferase, TrmH family [Escherichia coli MS 187-1]
gi|301303886|ref|ZP_07210005.1| RNA methyltransferase, TrmH family [Escherichia coli MS 124-1]
gi|301325334|ref|ZP_07218841.1| RNA methyltransferase, TrmH family [Escherichia coli MS 78-1]
gi|309797607|ref|ZP_07691995.1| RNA methyltransferase, TrmH family [Escherichia coli MS 145-7]
gi|415865585|ref|ZP_11538398.1| RNA methyltransferase, TrmH family [Escherichia coli MS 85-1]
gi|420393788|ref|ZP_14893032.1| spoU rRNA Methylase family protein [Escherichia coli EPEC C342-62]
gi|421820386|ref|ZP_16255871.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0821]
gi|422352269|ref|ZP_16433060.1| RNA methyltransferase, TrmH family [Escherichia coli MS 117-3]
gi|424118188|ref|ZP_17852016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA3]
gi|424528512|ref|ZP_17972219.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4421]
gi|424577888|ref|ZP_18017925.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1845]
gi|424583726|ref|ZP_18023361.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1863]
gi|425100370|ref|ZP_18503092.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 3.4870]
gi|425112478|ref|ZP_18514389.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 6.0172]
gi|425158453|ref|ZP_18557707.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA34]
gi|425164772|ref|ZP_18563650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA506]
gi|425170520|ref|ZP_18568983.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA507]
gi|425176569|ref|ZP_18574679.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA504]
gi|425182626|ref|ZP_18580311.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1999]
gi|425202131|ref|ZP_18598329.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE037]
gi|425208511|ref|ZP_18604298.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK2001]
gi|425257333|ref|ZP_18649830.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CB7326]
gi|425344666|ref|ZP_18731546.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1848]
gi|425388181|ref|ZP_18771729.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1866]
gi|428973837|ref|ZP_19044149.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.0039]
gi|429035079|ref|ZP_19100591.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0939]
gi|429041179|ref|ZP_19106260.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0932]
gi|429063437|ref|ZP_19127409.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0007]
gi|429075433|ref|ZP_19138678.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0678]
gi|432487423|ref|ZP_19729329.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE212]
gi|433175557|ref|ZP_20360061.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE232]
gi|444927331|ref|ZP_21246594.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli
09BKT078844]
gi|444977069|ref|ZP_21294154.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1805]
gi|444987836|ref|ZP_21304605.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA11]
gi|444993141|ref|ZP_21309775.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA19]
gi|300400630|gb|EFJ84168.1| RNA methyltransferase, TrmH family [Escherichia coli MS 84-1]
gi|300420289|gb|EFK03600.1| RNA methyltransferase, TrmH family [Escherichia coli MS 182-1]
gi|300464010|gb|EFK27503.1| RNA methyltransferase, TrmH family [Escherichia coli MS 187-1]
gi|300525068|gb|EFK46137.1| RNA methyltransferase, TrmH family [Escherichia coli MS 119-7]
gi|300840849|gb|EFK68609.1| RNA methyltransferase, TrmH family [Escherichia coli MS 124-1]
gi|300847861|gb|EFK75621.1| RNA methyltransferase, TrmH family [Escherichia coli MS 78-1]
gi|308118794|gb|EFO56056.1| RNA methyltransferase, TrmH family [Escherichia coli MS 145-7]
gi|315254039|gb|EFU34007.1| RNA methyltransferase, TrmH family [Escherichia coli MS 85-1]
gi|324019690|gb|EGB88909.1| RNA methyltransferase, TrmH family [Escherichia coli MS 117-3]
gi|390674633|gb|EIN50809.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA3]
gi|390848152|gb|EIP11636.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4421]
gi|390916208|gb|EIP74686.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1863]
gi|390916740|gb|EIP75191.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1845]
gi|391309867|gb|EIQ67530.1| spoU rRNA Methylase family protein [Escherichia coli EPEC C342-62]
gi|408066527|gb|EKH00981.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA34]
gi|408076749|gb|EKH10970.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA506]
gi|408080573|gb|EKH14638.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA507]
gi|408088791|gb|EKH22138.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA504]
gi|408094873|gb|EKH27873.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1999]
gi|408112762|gb|EKH44379.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE037]
gi|408119100|gb|EKH50194.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK2001]
gi|408170731|gb|EKH97889.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CB7326]
gi|408256717|gb|EKI78084.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1848]
gi|408304914|gb|EKJ22323.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1866]
gi|408546084|gb|EKK23503.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 3.4870]
gi|408546884|gb|EKK24288.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 6.0172]
gi|408609561|gb|EKK82939.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0821]
gi|427225033|gb|EKV93698.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.0039]
gi|427280961|gb|EKW45301.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0939]
gi|427289358|gb|EKW52921.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0932]
gi|427311629|gb|EKW73819.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0007]
gi|427325401|gb|EKW86843.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0678]
gi|431013255|gb|ELD26988.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE212]
gi|431688239|gb|ELJ53778.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE232]
gi|444536963|gb|ELV16937.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli
09BKT078844]
gi|444589501|gb|ELV64834.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1805]
gi|444589795|gb|ELV65118.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA11]
gi|444604075|gb|ELV78758.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA19]
Length = 218
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ +G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D
Sbjct: 66 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + N L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 GGYPVLAKVAKRK 191
>gi|383816798|ref|ZP_09972188.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. M24T3]
gi|383294327|gb|EIC82671.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. M24T3]
Length = 231
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ R + + +E + NVSA R+ADA+GV VH V S R +
Sbjct: 4 ERYARIREMLAARQPDLTVCMEQVHKPHNVSAVIRTADAVGVNEVHAVWPTS--RMKTQG 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ GA W+ ++ +E +++ G +I T++ A+ +D++ PT I++G E
Sbjct: 62 SFAAGANSWVQVKTHKTIQEAVAKMKAMGMQILATNLSEKAVDFRAIDYTRPTCILLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KTGITPEALALADSDIIIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|451966263|ref|ZP_21919517.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Edwardsiella tarda
NBRC 105688]
gi|451315042|dbj|GAC64879.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Edwardsiella tarda
NBRC 105688]
Length = 230
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + NVSA R+ADA+GV VH V S R
Sbjct: 1 MTPQRYARICQMMAARQPDLTVCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPGKSMRTL 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ + G+ W+ ++ + L+ +G +I T++ A+ ++D++ PT I++
Sbjct: 61 VS--TAAGSNSWVSVKTHRDIASAVSELKGQGMQILATNLSATAVDFREIDYTRPTCILM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDL 319
G E RG+S EAL L+D IPM GMV S NVSVA+ ++++ A R A L
Sbjct: 119 GQEKRGISAEALQLADRDIIIPMVGMVQSLNVSVASALILYEAQRQRQQAGMYQHHQPRL 178
Query: 320 TSEEKQILLAE 330
+ EE+Q LL E
Sbjct: 179 SDEEQQRLLWE 189
>gi|301018980|ref|ZP_07183203.1| RNA methyltransferase, TrmH family [Escherichia coli MS 69-1]
gi|300399474|gb|EFJ83012.1| RNA methyltransferase, TrmH family [Escherichia coli MS 69-1]
Length = 218
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ +G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D
Sbjct: 66 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + N L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 GGYPVLAKIAKRK 191
>gi|224373768|ref|YP_002608140.1| tRNA guanosine-2'-O-methyltransferase [Nautilia profundicola AmH]
gi|223589277|gb|ACM93013.1| tRNA guanosine-2'-O-methyltransferase [Nautilia profundicola AmH]
Length = 209
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
EER E+ N++ R ++ + ++ + N+SA R+ DA+ V ++ ++ R N
Sbjct: 6 EERLEKMKNILNTRQNTLRVFMDYVFSSHNLSAIVRTCDAVNVGKLY---YRHQRKVRLN 62
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
++MGA KW+ E + E + ++ GY++ T + + + ++D++ PT IV+GN
Sbjct: 63 NDITMGAHKWIFHEYVEDIEEFYKNIKKEGYQVVVTLLDEETVDFREVDYTKPTLIVLGN 122
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
E G SD ++ +D + IPM GM S NVSVA ++++ A RA +
Sbjct: 123 EVDGASDISIKYADKKVIIPMYGMSQSLNVSVANAVILYEAQRQRAAK 170
>gi|432780694|ref|ZP_20014913.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE59]
gi|432823122|ref|ZP_20056809.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE118]
gi|431324535|gb|ELG11987.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE59]
gi|431365331|gb|ELG51845.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE118]
Length = 218
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ +G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D
Sbjct: 66 RTIGDSVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + N L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 GGYPVLAKVAKRK 191
>gi|152992691|ref|YP_001358412.1| tRNA (guanosine-2'-O-)-methyltransferase [Sulfurovum sp. NBC37-1]
gi|151424552|dbj|BAF72055.1| tRNA (guanosine-2'-O-)-methyltransferase [Sulfurovum sp. NBC37-1]
Length = 216
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
+ER +R ++ + ++ ++++ + N+SA R+ DA+GVQ ++ + D+ + R +
Sbjct: 11 QERIDRIDQILCCKQPTLKVMLDDVHSSQNLSAILRTCDAVGVQHLYYTTSDN-RDLRIH 69
Query: 204 RHVSMGAEKWLDIELW--DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ ++ GA +W++ + R + GY++ TH+ A+ ++D++ PT IV+
Sbjct: 70 KTITQGAHRWVERTRISTEEQRVFLQKKQKEGYQVVVTHLEERAVPFREVDYTKPTIIVM 129
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
GNE GVS E + L+D IPM+GMV S NVSVAA ++++ A
Sbjct: 130 GNEKDGVSSETVELADTVIIIPMQGMVQSLNVSVAAALILYEA 172
>gi|238794541|ref|ZP_04638149.1| tRNA guanosine-2'-O-methyltransferase [Yersinia intermedia ATCC
29909]
gi|238726121|gb|EEQ17667.1| tRNA guanosine-2'-O-methyltransferase [Yersinia intermedia ATCC
29909]
Length = 230
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ VH + + R +
Sbjct: 4 QRYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLSS 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+S+ +I TH+ +A+ ++D++ PT I++G E
Sbjct: 64 --AAGSNSWVQVKTHTHISDAIAHLKSQNMQILATHLSDNAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A L +
Sbjct: 122 KTGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRAKSVLPED 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAQVAKRK 202
>gi|399024430|ref|ZP_10726467.1| rRNA methylase [Chryseobacterium sp. CF314]
gi|398080420|gb|EJL71234.1| rRNA methylase [Chryseobacterium sp. CF314]
Length = 223
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
++ E L +L EER ++ + S + V+E + F N +A RS +A G V
Sbjct: 5 AQTFEYLKQFLTEERLKKIEHFSPESSDFILPVMEDVYQFRNAAAIVRSVEACGFHKV-- 62
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
V+ + + N V+ GAE W+++E ++++GY+I +A+ + D
Sbjct: 63 VALEEENVFNPNLTVTKGAETWVEVEKMPKNISSLQKIKNQGYKILAVSPEKNAVMLPDY 122
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
+ P A+V G E GVS+E + +D +IPM G SFNVSVAAGI M+
Sbjct: 123 QITEPIALVFGTELEGVSEEVIDFADETLAIPMYGFTKSFNVSVAAGICMYE 174
>gi|300898586|ref|ZP_07116916.1| RNA methyltransferase, TrmH family [Escherichia coli MS 198-1]
gi|300983468|ref|ZP_07176615.1| RNA methyltransferase, TrmH family [Escherichia coli MS 200-1]
gi|417588789|ref|ZP_12239551.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_C165-02]
gi|422376036|ref|ZP_16456294.1| RNA methyltransferase, TrmH family [Escherichia coli MS 60-1]
gi|432355678|ref|ZP_19598943.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE2]
gi|432404051|ref|ZP_19646795.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE26]
gi|432428319|ref|ZP_19670799.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE181]
gi|432463018|ref|ZP_19705150.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE204]
gi|432519871|ref|ZP_19757050.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE228]
gi|432540034|ref|ZP_19776925.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE235]
gi|432633552|ref|ZP_19869470.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE80]
gi|432643249|ref|ZP_19879071.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE83]
gi|432668242|ref|ZP_19903813.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE116]
gi|432772428|ref|ZP_20006740.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE54]
gi|432841462|ref|ZP_20074919.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE140]
gi|432889134|ref|ZP_20102723.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE158]
gi|433053110|ref|ZP_20240305.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE122]
gi|433070013|ref|ZP_20256779.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE128]
gi|433180528|ref|ZP_20364903.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE82]
gi|300306932|gb|EFJ61452.1| RNA methyltransferase, TrmH family [Escherichia coli MS 200-1]
gi|300357749|gb|EFJ73619.1| RNA methyltransferase, TrmH family [Escherichia coli MS 198-1]
gi|324012714|gb|EGB81933.1| RNA methyltransferase, TrmH family [Escherichia coli MS 60-1]
gi|345331788|gb|EGW64247.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_C165-02]
gi|430872517|gb|ELB96121.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE2]
gi|430923464|gb|ELC44201.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE26]
gi|430950548|gb|ELC69777.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE181]
gi|430985598|gb|ELD02195.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE204]
gi|431048123|gb|ELD58108.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE228]
gi|431066861|gb|ELD75482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE235]
gi|431167239|gb|ELE67520.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE80]
gi|431177420|gb|ELE77351.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE83]
gi|431197584|gb|ELE96431.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE116]
gi|431323517|gb|ELG11010.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE54]
gi|431385925|gb|ELG69890.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE140]
gi|431413461|gb|ELG96227.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE158]
gi|431571506|gb|ELI44376.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE122]
gi|431578855|gb|ELI51444.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE128]
gi|431697870|gb|ELJ62957.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE82]
Length = 218
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ +G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D
Sbjct: 66 RTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + N L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 GGYPVLAKVAKRK 191
>gi|417337374|ref|ZP_12119544.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|417534856|ref|ZP_12188504.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|353564855|gb|EHC30811.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|353657914|gb|EHC98239.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
Length = 206
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH + S R R + G+ W+ ++ + L+ R
Sbjct: 9 NVSAIIRTADAVGVHEVHAIWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGR 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TH+ A+ ++D++ PT I++G E G++ EAL L+D IPM GMV S N
Sbjct: 67 GMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L +E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPEDEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|291294599|ref|YP_003505997.1| tRNA guanosine-2'-O-methyltransferase [Meiothermus ruber DSM 1279]
gi|290469558|gb|ADD26977.1| tRNA guanosine-2'-O-methyltransferase [Meiothermus ruber DSM 1279]
Length = 210
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC---------- 194
ER R V+ R + +++E + N SA RS DA+GV H +
Sbjct: 4 ERLARIRAVLNKRQPDLTVLMERVHKPHNFSAILRSCDAVGVLEAHAIPAKHGIPNLEEA 63
Query: 195 -DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
D S + + S A KW+ ++L F L++RG+++ H A+ D+
Sbjct: 64 EDLSLKGKTFNETSGSAAKWVGLQLHADTASAFAHLKARGFQVLAAHFSERAVDYRQADY 123
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
+ PT I++G E GVS EA L+D IPM GMV S NVSVAA +++ A R
Sbjct: 124 TRPTCILLGTEKWGVSPEAAELADAHILIPMVGMVQSLNVSVAAAVILFEAQRQRLQAGF 183
Query: 314 GCNGDLTSEEKQILLAEFSLRHSKS 338
L E+ + +L + RH++
Sbjct: 184 YEQVRLAPEQYEAVLQSWMARHAQG 208
>gi|452821950|gb|EME28974.1| tRNA/rRNA methyltransferase (SpoU) isoform 1 [Galdieria
sulphuraria]
Length = 532
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
+ + +++ L L + R E+ + R S+ ++ E L D N +A R+ + G+Q
Sbjct: 313 IKRTPLLDLLRQQLKKSRLEKMEQTLMQRCGSIQVLFENLHDPHNGAACIRTCEGHGIQH 372
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
VHVV +Y + V+M A+KW+ I + + L+ + + + DA+ +
Sbjct: 373 VHVVEAFEPFQYADG--VAMSADKWMTIHRYKNLYDAVETLKQQNMVLIAACLDPDAVPI 430
Query: 249 YDMDWS--CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVC 306
+D++ ++ GNE RG+S LSD++ IPM G SFN+SV+ + ++H
Sbjct: 431 DQVDFTKYSRLCLLFGNEERGLSKGIRQLSDMKVYIPMVGFTQSFNLSVSCAMFLYH--- 487
Query: 307 DRATRLVGC-NGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRKETTHMPKL 358
+L GC +LT EE Q L ++ +R S+ A ++ K H P+L
Sbjct: 488 ---LKLQGCIQPNLTQEEMQELYTKWLVRGSRRAAHLI-----EKHRFHFPEL 532
>gi|46200169|ref|YP_005836.1| tRNA (guanosine-2'-O-)-methyltransferase [Thermus thermophilus
HB27]
gi|55980096|ref|YP_143393.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus thermophilus HB8]
gi|48425869|pdb|1V2X|A Chain A, Trmh
gi|11079208|dbj|BAB17605.1| tRNA (Gm18) methyltransferase [Thermus thermophilus HB8]
gi|46197797|gb|AAS82209.1| tRNA (Guanosine-2'-O-)-methyltransferase [Thermus thermophilus
HB27]
gi|55771509|dbj|BAD69950.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus thermophilus HB8]
Length = 194
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 4/180 (2%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRYRENRHVSMGAE 211
V++ R + +++E + N+SA R+ DA+GV H V+ + E S G+
Sbjct: 15 VLRRRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNET---SGGSH 71
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
KW+ + + E F L+ RG+ + T + DA ++D++ PTA++ G E GVS+E
Sbjct: 72 KWVYLRVHPDLHEAFRFLKERGFTVYATALREDARDFREVDYTKPTAVLFGAEKWGVSEE 131
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEF 331
AL+L+D IPM GMV S NVSVAA +++ A R + L E Q +LA++
Sbjct: 132 ALALADGAIKIPMLGMVQSLNVSVAAAVILFEAQRQRLKAGLYDRPRLDPELYQKVLADW 191
>gi|347734342|ref|ZP_08867389.1| spoU rRNA Methylase family protein [Desulfovibrio sp. A2]
gi|347516855|gb|EGY24053.1| spoU rRNA Methylase family protein [Desulfovibrio sp. A2]
Length = 187
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
ER V+ R + LV+ + D NVSA +RS DA GV VH+ D++ R S
Sbjct: 2 ERIRRVLGWRQKDLTLVLANIHDPHNVSAIYRSCDAFGVAQVHLYYTDTAFPVL-GRKSS 60
Query: 208 MGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRG 267
A KW+D + L+ G+R+ T A + + D + PTAI++GNE+ G
Sbjct: 61 ASARKWVDTVRHSDAQSLMRTLKEGGHRVLATSCTPAARPLGEYDMTQPTAIIMGNEHSG 120
Query: 268 VSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
V+ E +L D IPM GM+ SFNVSVAA +++ A R
Sbjct: 121 VAPELTALVDGEVYIPMYGMIQSFNVSVAAAVILSEASRQR 161
>gi|421079347|ref|ZP_15540291.1| TRNA guanosine-2'-O-methyltransferase [Pectobacterium wasabiae CFBP
3304]
gi|401706053|gb|EJS96232.1| TRNA guanosine-2'-O-methyltransferase [Pectobacterium wasabiae CFBP
3304]
Length = 230
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + N+SA R+ADA+GV VH + S R +
Sbjct: 1 MTPQRYARIKEMLNCRQPDLTICMEQVHKPHNISAVIRTADAVGVHQVHAIWPTS--RMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W++++ R+ L+ G ++ T++ A+ ++D++ PT I++
Sbjct: 59 TLVSSAAGSNSWVEVKTHRTIRDAVGHLKDEGMQVLATNLSEHAVDFREIDYTLPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGD--L 319
G E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R + D L
Sbjct: 119 GQEKTGITAEALKLADRDIIIPMTGMVQSLNVSVASALILYEAQRQRQNAGMYQREDSPL 178
Query: 320 TSEEKQILLAE 330
EE+Q LL E
Sbjct: 179 DEEEQQRLLFE 189
>gi|348027676|ref|YP_004870362.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola
nitratireducens FR1064]
gi|347945019|gb|AEP28369.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola
nitratireducens FR1064]
Length = 232
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 99/181 (54%), Gaps = 5/181 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++K R + + +E ++ NVSA R+ DA+GV VH V + S+ R +
Sbjct: 8 ERYNRICQLLKMRQPDLTVCMEEVTKPHNVSAVIRTCDAVGVHKVHAV-WNESENLR--K 64
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+MG+ W+ +L ++ + +G ++ TH+ A ++D++ PT +++G E
Sbjct: 65 CTAMGSHVWVKTQLHKTMQDAVGCFKEQGMQVLVTHLDERASDFREVDYTKPTVVLLGQE 124
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G + +A++L+D +PM GMV S NVSVAA I+M+ A R + G + + +EK
Sbjct: 125 KTGATADAIALADHSIIVPMVGMVQSLNVSVAAAIVMYEA--QRQRQAAGMYEEQSLDEK 182
Query: 325 Q 325
+
Sbjct: 183 E 183
>gi|345867234|ref|ZP_08819251.1| spoU rRNA Methylase family protein [Bizionia argentinensis JUB59]
gi|344048448|gb|EGV44055.1| spoU rRNA Methylase family protein [Bizionia argentinensis JUB59]
Length = 211
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
+ +L ++R+E+F V+ R+ + E + N SA RS D G+Q VH+V +S
Sbjct: 1 MEEFLTDKRREKFNKVLSGRTKHFTVATEDVYQLHNTSAVMRSCDVFGIQEVHIVEEVNS 60
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
K + ++MGA+KW+D+ ++ L+ GY+I T + +++ D + +
Sbjct: 61 KSI--DGEIAMGAQKWVDLNRHHHVKDALKSLKEEGYQIVATTPHTNDCLLHEFDVTKKS 118
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCN- 316
G E G+S + L +D IPM G +S N+SV+A I++ D T+L +
Sbjct: 119 CFFFGRETEGLSQDVLDSADCFLKIPMTGFTESLNISVSAAIILQ----DVTTKLKQTDI 174
Query: 317 -GDLTSEEKQILLAEFSLRHSKSAISIVHEY 346
LT EK ++ + KS IV Y
Sbjct: 175 AWQLTENEKLEKRLDWIKKTVKSYDQIVERY 205
>gi|417127057|ref|ZP_11974548.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
97.0246]
gi|386144360|gb|EIG90826.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
97.0246]
Length = 229
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSSSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G+++EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|407695269|ref|YP_006820057.1| TrmH family RNA methyltransferase [Alcanivorax dieselolei B5]
gi|407252607|gb|AFT69714.1| RNA methyltransferase, TrmH family [Alcanivorax dieselolei B5]
Length = 234
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R ++ + R + +++EG+ N++A R+ DA+G+ VH V ++ R R
Sbjct: 1 MTPERYRRLLDTLDRRQPDLTVIMEGVHKPHNIAAVVRTCDAVGILDVHAVLPEN--RAR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+MG+++W+++ + + +R++G ++ H A+ ++D++ PTA+++
Sbjct: 59 VAAGTAMGSQRWINLHKHNDGVAAIDQVRTQGMQVLAAHFSDTALPYREVDFTKPTALLL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E GVS+ A + D +PM GMV SFNVSVAA I++ A R
Sbjct: 119 GTERFGVSEAAGAAVDGHVIVPMMGMVASFNVSVAAAIILSEACEQR 165
>gi|281204193|gb|EFA78389.1| anaphase promoting complex subunit 3 [Polysphondylium pallidum PN500]
Length = 1113
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 140 PYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKR 199
P L +ER ++ +V+++R+ V +V + + GNV+A RS +A+G+Q +HV+ +
Sbjct: 869 PVLSDERLDKLDSVLRSRTDRVAIVCDNVKTTGNVAAIIRSCEAMGIQHIHVI---DDQP 925
Query: 200 YRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT-- 257
Y +S G EKW+ + P +C + L+ + Y+I ++ + AI ++ + P
Sbjct: 926 YTPFNDISKGTEKWVTVHRHHTPLDCVDYLKQQRYQIWSSDLCEGAIRFDNLVKTLPATT 985
Query: 258 ---------------------------AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDS 290
AIV GNE GV+++ LSD R +PM GMV S
Sbjct: 986 TTTSTTTTTTSIISQNDNDNDDNNNRIAIVFGNEKSGVTEDMKILSDKRIFLPMYGMVQS 1045
Query: 291 FNVSVAAGILMHHAVCDRATRLVGCNGDLTSE 322
FNVSV+ G+ + A+ L G D E
Sbjct: 1046 FNVSVSVGMTL--AMLQMQGVLGGSLSDFNKE 1075
>gi|227113296|ref|ZP_03826952.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 230
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + NVSA R+ADA+GV VH + S R +
Sbjct: 1 MTPQRYARIKEMLNCRQPDLTICMEQVHKPHNVSAVIRTADAVGVHEVHAIWPTS--RMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ + L++ G ++ TH+ A+ ++D++ PT I++
Sbjct: 59 TLVSSAAGSNSWVQVKTHRNIGDAVGHLKAEGMQVLATHLSEHAVDFREIDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NG 317
G E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R ++ G +
Sbjct: 119 GQEKTGITAEALKLADRDIIIPMTGMVQSLNVSVASALILYEA--QRQRQIAGMYQREDS 176
Query: 318 DLTSEEKQILLAE 330
L EE+Q LL E
Sbjct: 177 PLDEEEQQRLLFE 189
>gi|22124024|ref|NP_667447.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis KIM10+]
gi|45439903|ref|NP_991442.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Microtus str. 91001]
gi|51594392|ref|YP_068583.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
IP 32953]
gi|108809496|ref|YP_653412.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Antiqua]
gi|108813973|ref|YP_649740.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Nepal516]
gi|145601108|ref|YP_001165184.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Pestoides F]
gi|150260899|ref|ZP_01917627.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis
CA88-4125]
gi|153947104|ref|YP_001399039.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
IP 31758]
gi|162419568|ref|YP_001604683.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Angola]
gi|165926178|ref|ZP_02222010.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936350|ref|ZP_02224919.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011464|ref|ZP_02232362.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213686|ref|ZP_02239721.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167402131|ref|ZP_02307608.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419397|ref|ZP_02311150.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426644|ref|ZP_02318397.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468213|ref|ZP_02332917.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis FV-1]
gi|218927258|ref|YP_002345133.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis CO92]
gi|229836148|ref|ZP_04456316.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis Pestoides
A]
gi|229839886|ref|ZP_04460045.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229841968|ref|ZP_04462123.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904503|ref|ZP_04519614.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis Nepal516]
gi|270488503|ref|ZP_06205577.1| RNA methyltransferase, TrmH family [Yersinia pestis KIM D27]
gi|384137979|ref|YP_005520681.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis A1122]
gi|384412887|ref|YP_005622249.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420544336|ref|ZP_15042590.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-01]
gi|420549736|ref|ZP_15047398.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-02]
gi|420565869|ref|ZP_15061701.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-05]
gi|420573400|ref|ZP_15068522.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-06]
gi|420580171|ref|ZP_15074685.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-07]
gi|420586654|ref|ZP_15080560.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-08]
gi|420588368|ref|ZP_15082109.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-09]
gi|420597777|ref|ZP_15090567.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-10]
gi|420598320|ref|ZP_15091037.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-11]
gi|420614460|ref|ZP_15105505.1| spoU rRNA Methylase family protein [Yersinia pestis PY-14]
gi|420620908|ref|ZP_15111179.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-15]
gi|420630108|ref|ZP_15119506.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-19]
gi|420635236|ref|ZP_15124094.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-25]
gi|420646963|ref|ZP_15134756.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-32]
gi|420651645|ref|ZP_15138933.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-34]
gi|420662191|ref|ZP_15148404.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-42]
gi|420679270|ref|ZP_15163910.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-47]
gi|420683458|ref|ZP_15167657.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-48]
gi|420693312|ref|ZP_15176353.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-52]
gi|420694425|ref|ZP_15177329.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-53]
gi|420704295|ref|ZP_15185514.1| spoU rRNA Methylase family protein [Yersinia pestis PY-54]
gi|420711127|ref|ZP_15191599.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-56]
gi|420716494|ref|ZP_15196361.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-58]
gi|420722149|ref|ZP_15201169.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-59]
gi|420727800|ref|ZP_15206190.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-60]
gi|420743340|ref|ZP_15220196.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-64]
gi|420758430|ref|ZP_15232947.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-66]
gi|420760691|ref|ZP_15234766.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-71]
gi|420765654|ref|ZP_15239259.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-72]
gi|420770856|ref|ZP_15243912.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-76]
gi|420782749|ref|ZP_15254495.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-89]
gi|420787111|ref|ZP_15258302.1| spoU rRNA Methylase family protein [Yersinia pestis PY-90]
gi|420809309|ref|ZP_15278323.1| spoU rRNA Methylase family protein [Yersinia pestis PY-94]
gi|420829368|ref|ZP_15296372.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-98]
gi|420829869|ref|ZP_15296799.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-99]
gi|420845176|ref|ZP_15310663.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-101]
gi|420845644|ref|ZP_15311071.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-102]
gi|420854578|ref|ZP_15318847.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-103]
gi|421761461|ref|ZP_16198261.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis INS]
gi|21956767|gb|AAM83698.1|AE013610_10 putative RNA methylase [Yersinia pestis KIM10+]
gi|45434758|gb|AAS60319.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Microtus str. 91001]
gi|51587674|emb|CAH19274.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia
pseudotuberculosis IP 32953]
gi|108777621|gb|ABG20140.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis Nepal516]
gi|108781409|gb|ABG15467.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis Antiqua]
gi|115345869|emb|CAL18727.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis CO92]
gi|145212804|gb|ABP42211.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis Pestoides
F]
gi|149290307|gb|EDM40384.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis
CA88-4125]
gi|152958599|gb|ABS46060.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
IP 31758]
gi|162352383|gb|ABX86331.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Angola]
gi|165915964|gb|EDR34572.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922038|gb|EDR39215.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989610|gb|EDR41911.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205088|gb|EDR49568.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166963391|gb|EDR59412.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167048506|gb|EDR59914.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167054333|gb|EDR64150.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229678621|gb|EEO74726.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis Nepal516]
gi|229690278|gb|EEO82332.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696252|gb|EEO86299.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706596|gb|EEO92602.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis Pestoides
A]
gi|270337007|gb|EFA47784.1| RNA methyltransferase, TrmH family [Yersinia pestis KIM D27]
gi|320013391|gb|ADV96962.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342853108|gb|AEL71661.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis A1122]
gi|391434237|gb|EIQ95452.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-01]
gi|391434519|gb|EIQ95703.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-02]
gi|391448182|gb|EIR08021.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-06]
gi|391450315|gb|EIR09963.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-05]
gi|391453767|gb|EIR13048.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-08]
gi|391456227|gb|EIR15273.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-07]
gi|391466590|gb|EIR24648.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-09]
gi|391467532|gb|EIR25504.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-10]
gi|391484110|gb|EIR40409.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-11]
gi|391496076|gb|EIR51062.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-15]
gi|391502214|gb|EIR56536.1| spoU rRNA Methylase family protein [Yersinia pestis PY-14]
gi|391514927|gb|EIR67991.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-19]
gi|391516412|gb|EIR69310.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-25]
gi|391530577|gb|EIR82143.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-32]
gi|391531953|gb|EIR83398.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-34]
gi|391548673|gb|EIR98447.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-42]
gi|391560805|gb|EIS09401.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-47]
gi|391564930|gb|EIS13089.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-52]
gi|391565407|gb|EIS13521.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-48]
gi|391572315|gb|EIS19560.1| spoU rRNA Methylase family protein [Yersinia pestis PY-54]
gi|391578236|gb|EIS24535.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-53]
gi|391593678|gb|EIS37951.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-56]
gi|391606590|gb|EIS49306.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-60]
gi|391608462|gb|EIS50944.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-58]
gi|391609086|gb|EIS51518.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-59]
gi|391631291|gb|EIS70938.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-64]
gi|391631835|gb|EIS71421.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-66]
gi|391643864|gb|EIS81987.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-71]
gi|391646931|gb|EIS84620.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-72]
gi|391656418|gb|EIS93058.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-76]
gi|391665196|gb|EIT00808.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-89]
gi|391670001|gb|EIT05086.1| spoU rRNA Methylase family protein [Yersinia pestis PY-90]
gi|391687655|gb|EIT20943.1| spoU rRNA Methylase family protein [Yersinia pestis PY-94]
gi|391691794|gb|EIT24689.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-98]
gi|391706325|gb|EIT37768.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-101]
gi|391717016|gb|EIT47420.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-99]
gi|391726763|gb|EIT56067.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-103]
gi|391731967|gb|EIT60597.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-102]
gi|411177783|gb|EKS47795.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis INS]
Length = 230
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R +++ R + + +E + NVSA R+ADA+G+ VH + + R +
Sbjct: 4 QRYARICDMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLS- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+S+ +I TH+ A+ ++D++ PT I++G E
Sbjct: 63 -AAAGSNSWVQVKTHPHIADAIAYLKSQDMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S EAL+L+D IPM GMV S NVSVA+ ++++ A R A + L
Sbjct: 122 KTGISPEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYKRTHSVLAES 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|425280060|ref|ZP_18671277.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli
ARS4.2123]
gi|408197874|gb|EKI23121.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli
ARS4.2123]
Length = 206
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V S R R + G+ W+ ++ + L+ +
Sbjct: 9 NVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQ 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D IPM GMV S N
Sbjct: 67 GMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPETEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|296100480|ref|YP_003610626.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295054939|gb|ADF59677.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 206
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V + R R + G+ W+ ++ E + L+ R
Sbjct: 9 NVSAIVRTADAVGVHEVHAVWPGA--RMRTMASTAAGSNSWVSVKTHQTIGEAVSHLKGR 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I T++ A+ ++D++ PT I++G E G++ EAL L+D IPM GMV S N
Sbjct: 67 GMQILATNLSAKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAE 330
VSVA+ ++++ A R A N L +E+Q LL E
Sbjct: 127 VSVASALILYEAQRQRQNAGMYERSNSMLPEDEQQRLLFE 166
>gi|415773985|ref|ZP_11486532.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 3431]
gi|416338172|ref|ZP_11674406.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli WV_060327]
gi|315618645|gb|EFU99231.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 3431]
gi|320193842|gb|EFW68475.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli WV_060327]
Length = 206
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V S R R + G+ W+ ++ + L+ +
Sbjct: 9 NVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQ 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D IPM GMV S N
Sbjct: 67 GMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|300714631|ref|YP_003739434.1| tRNA/rRNA methyltransferase [Erwinia billingiae Eb661]
gi|299060467|emb|CAX57574.1| Putative tRNA/rRNA methyltransferase [Erwinia billingiae Eb661]
Length = 232
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R + ++ R + + + +E + NV+A R+ADA+GV VH V S R R
Sbjct: 4 QRYARILEMLAARQHDLTVCMEQVHKPHNVAAVIRTADAVGVHEVHAVWPGS--RMRTMV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + L+ +G +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVQVKTHSNIADAVGHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G++ +AL L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 122 KTGITQQALDLADQDIIIPMIGMVQSLNVSVASALILYEAQRQR 165
>gi|414578459|ref|ZP_11435625.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 3233-85]
gi|415858432|ref|ZP_11532947.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri 2a str.
2457T]
gi|416284352|ref|ZP_11647198.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii ATCC 9905]
gi|417583274|ref|ZP_12234073.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_B2F1]
gi|417599072|ref|ZP_12249696.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 3030-1]
gi|417684491|ref|ZP_12333831.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella boydii 3594-74]
gi|417692031|ref|ZP_12341236.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella boydii 5216-82]
gi|417704921|ref|ZP_12354014.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-218]
gi|417719791|ref|ZP_12368668.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-227]
gi|417730817|ref|ZP_12379498.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-671]
gi|417740572|ref|ZP_12389138.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri
4343-70]
gi|419053466|ref|ZP_13600332.1| spoU rRNA Methylase family protein [Escherichia coli DEC3B]
gi|419133818|ref|ZP_13678642.1| spoU rRNA Methylase family protein [Escherichia coli DEC5D]
gi|419218077|ref|ZP_13761067.1| spoU rRNA Methylase family protein [Escherichia coli DEC8D]
gi|419805444|ref|ZP_14330580.1| RNA methyltransferase, TrmH family [Escherichia coli AI27]
gi|420289194|ref|ZP_14791375.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW10246]
gi|420338572|ref|ZP_14840126.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-315]
gi|420345735|ref|ZP_14847164.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii 965-58]
gi|424534662|ref|ZP_17977999.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4422]
gi|425128408|ref|ZP_18529566.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0586]
gi|425152556|ref|ZP_18552160.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.0221]
gi|425400966|ref|ZP_18783661.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1869]
gi|428961516|ref|ZP_19032796.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 89.0511]
gi|429828830|ref|ZP_19359830.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0109]
gi|429835272|ref|ZP_19365542.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0010]
gi|445020350|ref|ZP_21336308.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA8]
gi|445031167|ref|ZP_21346827.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1781]
gi|313647474|gb|EFS11924.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri 2a str.
2457T]
gi|320179989|gb|EFW54931.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii ATCC 9905]
gi|332084833|gb|EGI90016.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella boydii 5216-82]
gi|332089513|gb|EGI94617.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella boydii 3594-74]
gi|332749893|gb|EGJ80305.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-671]
gi|332750609|gb|EGJ81017.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri
4343-70]
gi|332997445|gb|EGK17061.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-218]
gi|333013287|gb|EGK32659.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-227]
gi|345334336|gb|EGW66780.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_B2F1]
gi|345348568|gb|EGW80861.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 3030-1]
gi|377889856|gb|EHU54315.1| spoU rRNA Methylase family protein [Escherichia coli DEC3B]
gi|377970522|gb|EHV33881.1| spoU rRNA Methylase family protein [Escherichia coli DEC5D]
gi|378057785|gb|EHW20007.1| spoU rRNA Methylase family protein [Escherichia coli DEC8D]
gi|384471545|gb|EIE55620.1| RNA methyltransferase, TrmH family [Escherichia coli AI27]
gi|390787168|gb|EIO54660.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW10246]
gi|390858603|gb|EIP20982.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4422]
gi|391257887|gb|EIQ16995.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-315]
gi|391275787|gb|EIQ34570.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii 965-58]
gi|391281074|gb|EIQ39727.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 3233-85]
gi|408316315|gb|EKJ32597.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1869]
gi|408564309|gb|EKK40420.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0586]
gi|408593984|gb|EKK68283.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.0221]
gi|427202319|gb|EKV72652.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 89.0511]
gi|429251311|gb|EKY35920.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0109]
gi|429252266|gb|EKY36812.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0010]
gi|444627278|gb|ELW01048.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA8]
gi|444638033|gb|ELW11386.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1781]
Length = 206
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V S R R + G+ W+ ++ + L+ +
Sbjct: 9 NVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQ 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D IPM GMV S N
Sbjct: 67 GMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|410678801|ref|YP_006931203.1| spoU protein [Borrelia afzelii HLJ01]
gi|408536189|gb|AFU74320.1| spoU protein [Borrelia afzelii HLJ01]
Length = 218
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
++ LS ++ + +K R V+ R+ + V+E + N SAT R+ + LG+ ++V+
Sbjct: 9 IDVLSEFITDGKKARIEEVLNRRTNYLTFVLEDIVQSHNASATIRTGEILGLSDIYVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
D + +Y N +++G+ +W+++ + + + L+S GY I T + ++++ + +
Sbjct: 67 DKNNKYTLNPDITLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLSEQSVNLENFSIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
A+ G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAVFFGTELTGLSSEVLEAADLCIKIPMYGFTQSYNISVAVAIVMY 174
>gi|188532205|ref|YP_001906002.1| tRNA guanosine-2'-O-methyltransferase [Erwinia tasmaniensis Et1/99]
gi|188027247|emb|CAO95086.1| Putative tRNA/rRNA methyltransferase [Erwinia tasmaniensis Et1/99]
Length = 231
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 QRYARIRAMLAARQHDLTVCMEQVHKPHNVSAVIRTADAIGVHEVHAVWPGS--RMRTMV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + + + L+ + +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVQVKTHRSIADAVSCLKGQNMQILATHLSEKAVDFREVDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + L
Sbjct: 122 KTGITQEALELADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLREESSLEYS 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|392542316|ref|ZP_10289453.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas piscicida
JCM 20779]
Length = 232
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R R +V+ R + + ++ + N+SA R+ADA+G VH V +R
Sbjct: 1 MAENRFHRVKSVLDRRQTDLTVCLDEVHKHHNLSAIVRTADAVGCHHVHAVWPQDQRRLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSR--GYRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ W++ + + + +R + G ++ T++ A+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWVETHMHEHIDQAVATIREQNPGVQLLATNLSDSAVDFREIDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+VG E G+S+ AL +D IPM+GMV S NVSVAA ++++ A
Sbjct: 119 IVGQERLGISERALEHADQHIVIPMQGMVQSLNVSVAAALILYEA 163
>gi|269137386|ref|YP_003294086.1| tRNA guanosine-2-O-methyltransferase [Edwardsiella tarda EIB202]
gi|387866174|ref|YP_005697643.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Edwardsiella tarda
FL6-60]
gi|267983046|gb|ACY82875.1| tRNA guanosine-2-O-methyltransferase [Edwardsiella tarda EIB202]
gi|304557487|gb|ADM40151.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Edwardsiella tarda
FL6-60]
Length = 219
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 10/175 (5%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R + + G+ W++++
Sbjct: 10 TVCM--EQVHKPHNVSAVIRTADAVGVHQVHAVWPGKSMRTLVS--TAAGSNSWVNVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
L+ +G +I T++ A+ ++D++ PT I++G E RG+S EAL L+D
Sbjct: 66 RDIATAVGELKGQGMQILATNLSATAVDFREIDYTRPTCILMGQEKRGISAEALQLADRD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG----DLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R + G G L+ EE+Q LL E
Sbjct: 126 IIIPMVGMVQSLNVSVASALILYEA--QRQRQQAGMYGRSQPSLSEEEQQRLLWE 178
>gi|440795347|gb|ELR16474.1| RNA methyltransferase, TrmH superfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 424
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 13/189 (6%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC--DSSKRYREN 203
R R V+ R+ LV+E D N A R+A+ LG+Q V +V K++ N
Sbjct: 154 RLRRAEKVLSERTQRFLLVLERPHDNHNQQAVLRTAECLGIQHVWIVKNVEQKQKKFVAN 213
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV---YDMDWSCPTAIV 260
R ++ G++ WL + + EC LR ++ T + AI + +D A+V
Sbjct: 214 RKITRGSDDWLSVREFQTTTECLMALREDNRQVWVTDLSKTAICLDEKVQVDIPAKVALV 273
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH--AVCDRATRLVGCNGD 318
+G E G S E L+ +D R +PM G DSFN+SVA +L+ VC +A GD
Sbjct: 274 IGREADGCSQEMLAAADKRVFLPMYGFSDSFNLSVATALLLQRLFLVCPQA------RGD 327
Query: 319 LTSEEKQIL 327
L EEK L
Sbjct: 328 LPEEEKHHL 336
>gi|425302520|ref|ZP_18692400.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 07798]
gi|408210857|gb|EKI35414.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 07798]
Length = 229
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMRTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ T I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRSTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPETE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|441500849|ref|ZP_20982998.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Fulvivirga imtechensis
AK7]
gi|441435423|gb|ELR68818.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Fulvivirga imtechensis
AK7]
Length = 227
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 6/174 (3%)
Query: 130 SSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSV 189
+S ++ + Y+ + +K V+ R+ + LV+E + N SA R+ + G+Q +
Sbjct: 4 TSVRLLNFFAEYVTDHKKVLVEKVLSQRTRHLTLVLEDIYQPQNASAVVRTCEGFGLQDL 63
Query: 190 HVVSCDSSKRYRENRHVSMGAEKWLDIELWDA----PRECFNVLRSRGYRIATTHVGMDA 245
HV+ + Y N V GA KW+DI + C+N LR + Y I T +
Sbjct: 64 HVI--EGRHHYELNPRVVHGASKWIDIIKYSGRPNNTATCYNHLREKDYTILATSPESNG 121
Query: 246 ISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGI 299
+S+YD+D A+V G E G++D A +D +IPM G +S+N+SV+A I
Sbjct: 122 LSIYDVDVKDKIALVFGTEKYGITDYAKQHADGLVTIPMYGFTESYNISVSAAI 175
>gi|317050128|ref|YP_004117776.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. At-9b]
gi|316951745|gb|ADU71220.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. At-9b]
Length = 231
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
++R R ++ R + + + +E + NVSA R+ADA+G+ VH V S R R
Sbjct: 3 DQRFARIREMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSVRMRTM 60
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S G+ W+ ++ + + L+++G ++ T++ A+ ++D++ PT I++G
Sbjct: 61 VSASAGSNSWVKVKTHRNITDAVSHLKTQGMQVLATNLSAKAVDFREIDYTRPTCILMGQ 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTS 321
E G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A L
Sbjct: 121 EKTGITAEALALADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQNAGMYQRTYSLLDE 180
Query: 322 EEKQILLAE 330
EE+Q LL E
Sbjct: 181 EEQQRLLFE 189
>gi|386361244|ref|YP_006059489.1| rRNA methylase [Thermus thermophilus JL-18]
gi|383510271|gb|AFH39703.1| rRNA methylase [Thermus thermophilus JL-18]
Length = 194
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 4/180 (2%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRYRENRHVSMGAE 211
V++ R + +++E + N+SA R+ DA+GV H V+ + E S G+
Sbjct: 15 VLRRRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNET---SGGSH 71
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
KW+ + + E F L+ RG+ + T + DA ++D++ PT +++G E GVS+E
Sbjct: 72 KWVYLRVHPDIHEAFRFLKERGFTVYATALREDARDFREVDYTKPTCVLLGAEKWGVSEE 131
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEF 331
AL+LSD IPM GMV S NVSVAA +++ A R + L E Q +LA++
Sbjct: 132 ALALSDGAIKIPMLGMVQSLNVSVAAAVILFEAQRQRLKAGLYERPRLDPELYQKVLADW 191
>gi|157373101|ref|YP_001481090.1| tRNA guanosine-2'-O-methyltransferase [Serratia proteamaculans 568]
gi|157324865|gb|ABV43962.1| tRNA guanosine-2'-O-methyltransferase [Serratia proteamaculans 568]
Length = 231
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 8/190 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ R + + +E + NVSA R+ADA+GV VH V + R R
Sbjct: 4 ERYARICEMLATRQPDLTVCLEQVHKPHNVSAIIRTADAVGVHQVHAVW--PTPRMRTLV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W++++ + L+ +G +I T++ A+ ++D++ PT +++G E
Sbjct: 62 SSAAGSNSWVNVKTHPTIVDAVTHLKDQGMQILATNLSARAVDFREVDYTRPTCVLLGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDLT 320
G+++EAL L+D IPM GMV S NVSVA+ ++++ A R + G + L
Sbjct: 122 KTGITEEALRLADQDIIIPMIGMVQSLNVSVASALILYEA--QRQRQNAGLYRREHSMLD 179
Query: 321 SEEKQILLAE 330
EE+Q LL E
Sbjct: 180 QEEQQRLLFE 189
>gi|313679270|ref|YP_004057009.1| tRNA guanosine-2'-o-methyltransferase [Oceanithermus profundus DSM
14977]
gi|313151985|gb|ADR35836.1| tRNA guanosine-2'-O-methyltransferase [Oceanithermus profundus DSM
14977]
Length = 214
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R +V+ R + +++E + N+SA R+ADA+GV H V+
Sbjct: 1 MTPERYRRLRDVLDKRQPDLTVLMENVHKPHNLSAILRTADAVGVYEAHAVNPTGGVPTF 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S G+EKW+ + + L+ RG+ + ++ A+ ++D++ P+A+++
Sbjct: 61 HD--TSGGSEKWVYLRVHPNVEAALEHLKGRGFTVYAANLSERAVDYREVDYTRPSAVLL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E GVS A L+D IPM GMV S NVSVAA +++ A C R
Sbjct: 119 GAEKWGVSPRAAELADADVIIPMMGMVQSLNVSVAAAVILFEAQCQR 165
>gi|126656950|ref|ZP_01728128.1| rRNA methylase SpoU [Cyanothece sp. CCY0110]
gi|126621788|gb|EAZ92497.1| rRNA methylase SpoU [Cyanothece sp. CCY0110]
Length = 220
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 2/191 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R R V++ R + ++ E + N+SA R+ DA+G+ VH + +++ +
Sbjct: 3 LLPRRYHRIRQVLEKRQPDLTILTEDVHKPHNLSAIIRTCDAVGILDVHCI--NTTDEFP 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
VS G++KW+ + + N L+ + + I H ++ ++D++ PTAI++
Sbjct: 61 TFSQVSQGSDKWVFLHSHPNIKTGINHLKRQNFNIYAAHFTDQSLDYREIDYTQPTAILL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
G E GVS+EA +L D +PM GMV S NVSVAA +++ A R + + L
Sbjct: 121 GAEKWGVSEEAANLVDGHIIVPMLGMVQSLNVSVAAAVILFEAQRQRLAQKMYDTSRLDL 180
Query: 322 EEKQILLAEFS 332
+ +L E+S
Sbjct: 181 DRYHKILFEWS 191
>gi|422293719|gb|EKU21019.1| trna rrna methyltransferase [Nannochloropsis gaditana CCMP526]
Length = 254
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
+ E LS + R ER ++V R+ SV V E +++ N+ A RS DA GVQ HV
Sbjct: 15 AAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHV 74
Query: 192 VSCDSSKRYRENRHV----SMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHV--GMDA 245
+ D++ + +R +MG++KWL + + C L+ GY + + + G
Sbjct: 75 I-LDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSP 133
Query: 246 ISVYDMDWSC-PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
V +++W+ AIV+GNE RG+++E SL D IPM G +SFN+S + + +
Sbjct: 134 KPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFV 193
Query: 305 VCDRATRLVGCNGDLTSEEK 324
+ +GDL + EK
Sbjct: 194 SSMGGLK----HGDLPTAEK 209
>gi|216263798|ref|ZP_03435792.1| tRNA/rRNA methyltransferase [Borrelia afzelii ACA-1]
gi|215979842|gb|EEC20664.1| tRNA/rRNA methyltransferase [Borrelia afzelii ACA-1]
Length = 218
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
++ LS ++ + +K R V+ R+ + V+E + N SAT R+ + LG+ ++V+
Sbjct: 9 IDVLSEFITDGKKARIEEVLSRRTNYLTFVLEDIVQSHNASATIRTGEILGLSDIYVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
D + +Y N +++G+ +W+++ + + + L+S GY I T + ++++ + +
Sbjct: 67 DKNNKYTLNPDITLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLSEQSVNLENFPIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
A+ G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAVFFGTELTGLSSEVLEAADLCVKIPMYGFTQSYNISVAVAIVMY 174
>gi|282599849|ref|ZP_05972117.2| tRNA guanosine-2'-O-methyltransferase [Providencia rustigianii DSM
4541]
gi|282567380|gb|EFB72915.1| tRNA guanosine-2'-O-methyltransferase [Providencia rustigianii DSM
4541]
Length = 226
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 96/178 (53%), Gaps = 19/178 (10%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM------GA 210
R + L +E + NVSA RSADA+G+ +H + D +HV + G+
Sbjct: 5 RQPDLTLCLEEIHKPHNVSAIVRSADAIGIHQIHAIWPD--------QHVKLSVSSAAGS 56
Query: 211 EKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSD 270
W+ + + + ++++G ++ T++ A+ ++D++ PT I++G E +G+S
Sbjct: 57 NSWVKVISHSSTEDAIAQIKAQGMQVLATNLSEHAVDFREIDYTRPTCIMMGQEKKGISQ 116
Query: 271 EALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG---DLTSEEKQ 325
+AL+L+D IPM GMV S NVSVA+ ++M+ A R +L G L SE++Q
Sbjct: 117 KALALADQHIIIPMAGMVQSLNVSVASALIMYEA--QRQRQLAGMYNREYSLLSEQEQ 172
>gi|384206553|ref|YP_005592274.1| spoU rRNA methylase family protein [Borrelia afzelii PKo]
gi|342856436|gb|AEL69284.1| spoU rRNA Methylase family protein [Borrelia afzelii PKo]
Length = 218
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
++ LS ++ + +K R V+ R+ + V+E + N SAT R+ + LG+ ++V+
Sbjct: 9 IDVLSEFITDGKKARIEEVLSRRTNYLTFVLEDIVQSHNASATIRTGEILGLSDIYVI-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
D + +Y N +++G+ +W+++ + + + L+S GY I T + ++++ + +
Sbjct: 67 DKNNKYTLNPDITLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLSEQSVNLENFPIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
A+ G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 127 NKMAVFFGTELTGLSSEVLEAADLCIKIPMYGFTQSYNISVAVAIVMY 174
>gi|317494702|ref|ZP_07953114.1| SpoU rRNA methylase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917304|gb|EFV38651.1| SpoU rRNA methylase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 230
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + NVSA R+ADA+GV VH V K R
Sbjct: 1 MTPQRYARICQMLATRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHQVHAVW--PGKTMR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ + L++ G +I T++ A+ ++D++ PT I++
Sbjct: 59 TMVSTAAGSNSWVSVKTHPDISSAVSTLKAEGMQILATNLSSTAVDFREIDYTRPTCILM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDL 319
G E G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + L
Sbjct: 119 GQEKYGITAEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQREHSPL 178
Query: 320 TSEEKQILLAEFSLRHSKSAISIVHEYAKRKE 351
+ E++Q LL E ++ AKRK+
Sbjct: 179 SDEDQQRLLWE-------GGYPVLANVAKRKK 203
>gi|111114873|ref|YP_709491.1| spoU protein [Borrelia afzelii PKo]
gi|110890147|gb|ABH01315.1| spoU protein [Borrelia afzelii PKo]
Length = 222
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
++ LS ++ + +K R V+ R+ + V+E + N SAT R+ + LG+ ++V+
Sbjct: 13 IDVLSEFITDGKKARIEEVLSRRTNYLTFVLEDIVQSHNASATIRTGEILGLSDIYVI-- 70
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
D + +Y N +++G+ +W+++ + + + L+S GY I T + ++++ + +
Sbjct: 71 DKNNKYTLNPDITLGSSQWINLNKYKNAKFAIDRLKSDGYSIVATSLSEQSVNLENFPIN 130
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
A+ G E G+S E L +DL IPM G S+N+SVA I+M+
Sbjct: 131 NKMAVFFGTELTGLSSEVLEAADLCIKIPMYGFTQSYNISVAVAIVMY 178
>gi|409201170|ref|ZP_11229373.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas
flavipulchra JG1]
Length = 232
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R R +V+ R + + ++ + N+SA R+ADA+G VH V +R
Sbjct: 1 MAENRFHRVKSVLDRRQTDLTVCLDEVHKHHNLSAIVRTADAVGCHHVHAVWPQDQRRLT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSR--GYRIATTHVGMDAISVYDMDWSCPTAI 259
N S G++ W++ + + + +R + G ++ T++ A+ ++D++ PTAI
Sbjct: 61 NN--TSGGSKNWVETHMHEDIDQAVATIREQNPGVQLLATNLSDSAVDFREIDYTKPTAI 118
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+VG E G+S+ AL +D IPM+GMV S NVSVAA ++++ A
Sbjct: 119 IVGQERLGISERALEHADQHIVIPMQGMVQSLNVSVAAALILYEA 163
>gi|404404683|ref|ZP_10996267.1| rRNA methylase [Alistipes sp. JC136]
Length = 228
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E + L ++M ER E V R+ + ++ E + N +A R +A GVQ +H V
Sbjct: 13 ERIACLREFMMPERYEVLRKTVGMRTRYMTVLAENMYHGQNAAALIRHCEAFGVQEMHTV 72
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
S + N ++ GAE+W+D+ + E LR GYRI T + ++ D
Sbjct: 73 EALCS--FEPNPDIARGAERWVDVRQHPSTAEAIAALRGAGYRIVATTPHREDVTPETFD 130
Query: 253 WS-CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
+ P A+V G E+ G+SDE ++ +D IPM GMV+S NVS +A IL++
Sbjct: 131 VARGPFALVFGTEHAGISDEVIASADEFLRIPMCGMVESLNVSASAAILIY 181
>gi|419138955|ref|ZP_13683745.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC5E]
gi|377981079|gb|EHV44339.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC5E]
Length = 229
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + + +E + NVSA R+ADA+GV VH V S R
Sbjct: 5 RYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGS--RMCTMAS 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT I++G E
Sbjct: 63 AAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEE 323
G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N L E
Sbjct: 123 TGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAE 182
Query: 324 KQILLAEFSLRHSKSAISIVHEYAKRK 350
+Q LL E ++ + AKRK
Sbjct: 183 QQRLLFE-------GGYPVLAKVAKRK 202
>gi|94986799|ref|YP_594732.1| rRNA methylases [Lawsonia intracellularis PHE/MN1-00]
gi|442555629|ref|YP_007365454.1| SpoU rRNA methylase [Lawsonia intracellularis N343]
gi|94731048|emb|CAJ54411.1| rRNA methylases [Lawsonia intracellularis PHE/MN1-00]
gi|441493076|gb|AGC49770.1| SpoU rRNA methylase [Lawsonia intracellularis N343]
Length = 196
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER + +V+ R ++ LV+ + D NVSA +RSADA G+ ++H+ D+ +
Sbjct: 5 ITSERLAKIKHVLSLRQKNLTLVLANIHDPHNVSAIYRSADAFGIDTIHLYYTDTPFP-K 63
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
S A+KW+ + + +L+ Y++ T A + +++ TAI++
Sbjct: 64 LGSKSSASAKKWVKTIYHQSANKLIRMLKEDNYKVIATSCTSQAQPLLSHNFTGSTAIIM 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
GNE+ GV E L D IPM GMV SFNVSVAA I++ A R
Sbjct: 124 GNEHAGVPPELTGLVDSELYIPMYGMVQSFNVSVAAAIILAEASRQR 170
>gi|417675136|ref|ZP_12324561.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella dysenteriae
155-74]
gi|332084466|gb|EGI89661.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella dysenteriae
155-74]
Length = 206
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V R R + G+ W+ ++ + L+ +
Sbjct: 9 NVSAIIRTADAVGVHEVHAVW--PGNRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQ 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D IPM GMV S N
Sbjct: 67 GMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|259906722|ref|YP_002647078.1| tRNA guanosine-2'-O-methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|385786673|ref|YP_005817782.1| tRNA guanosine-2'-O-methyltransferase [Erwinia sp. Ejp617]
gi|387869423|ref|YP_005800792.1| RNA methylase [Erwinia pyrifoliae DSM 12163]
gi|224962344|emb|CAX53799.1| tRNA/rRNA methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|283476505|emb|CAY72320.1| putative RNA methylase [Erwinia pyrifoliae DSM 12163]
gi|310765945|gb|ADP10895.1| tRNA guanosine-2'-O-methyltransferase [Erwinia sp. Ejp617]
Length = 231
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 QRYARIRAMLAARQHDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPGS--RMRTMV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + E L+ + +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRSIAEAVACLKGQNMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSE-- 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R + + T E
Sbjct: 122 KTGITREALDLADGDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLREESTLEYS 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|434398981|ref|YP_007132985.1| tRNA guanosine-2'-O-methyltransferase [Stanieria cyanosphaera PCC
7437]
gi|428270078|gb|AFZ36019.1| tRNA guanosine-2'-O-methyltransferase [Stanieria cyanosphaera PCC
7437]
Length = 216
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER ++F V+ R + ++ E + N SA R+ DA+GV ++H V+ SS
Sbjct: 1 MTPERYQKFQQVLNRRQLDLTVITEDVHKPHNFSAIIRTCDAVGVFAIHAVNSRSSMPIY 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
V+ G+EKW+ + L +G ++ H+ A+ +D++ PTAI++
Sbjct: 61 NQ--VAKGSEKWVACHTHTNIESAVSDLHQQGLKVYAAHLSKQALDYRMIDYTKPTAILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E GV+ +A L D IPM GMV S NVSVAA +++ A R
Sbjct: 119 GAEKSGVTQKAADLVDGHIIIPMLGMVQSLNVSVAAAVILFEAQRQR 165
>gi|332159669|ref|YP_004296246.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|386310361|ref|YP_006006417.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Yersinia enterocolitica
subsp. palearctica Y11]
gi|433548793|ref|ZP_20504841.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Yersinia
enterocolitica IP 10393]
gi|318603765|emb|CBY25263.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325663899|gb|ADZ40543.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330860934|emb|CBX71212.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
W22703]
gi|431790307|emb|CCO67881.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Yersinia
enterocolitica IP 10393]
Length = 219
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VCL E + NVSA R+ADA+G+ +H + + R + + G+ W+ ++
Sbjct: 10 TVCL--EEVHKPHNVSAIIRTADAVGIHQIHAIWPTPAMYTRLSS--AAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+S+G +I TH+ A+ ++D++ PT I++G E G+S EAL+++D
Sbjct: 66 SHITDAITHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISKEALAMADKD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A L+ +E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRTQSVLSEDEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ + AKRK
Sbjct: 179 GGYPVLAQVAKRK 191
>gi|398345010|ref|ZP_10529713.1| spoU protein [Leptospira inadai serovar Lyme str. 10]
Length = 239
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L E R+ + V+ R+ + +V+E + N SAT R+++ LG+ V+ V +S YR
Sbjct: 24 LSESRRRKIEEVLSFRTKYLTIVLEDIFQPFNASATLRTSECLGLSDVYAVENRNS--YR 81
Query: 202 ENRHVSMGAEKWLDIELW-----DAPRECFNVLRSRGYRIATTHVGMDAISVYDMD---W 253
N V+ GA+KWL I + D R C L+ GYRI T D + + ++
Sbjct: 82 PNAGVAKGAQKWLRIHRYQSMGEDNTRFCLRHLKESGYRIVATSPWGDGETFHSLESLPL 141
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
PTA++ G E G+S ALS +DL +PM G +S+N+SV I++ H + R R V
Sbjct: 142 DRPTAVLFGAEEIGLSAIALSQADLHLRLPMFGFTESYNLSVTVAIVLSHLI-PRVRREV 200
Query: 314 GCNGDLTSEE 323
+LT EE
Sbjct: 201 E-GWELTEEE 209
>gi|354599748|ref|ZP_09017765.1| tRNA guanosine-2'-O-methyltransferase [Brenneria sp. EniD312]
gi|353677683|gb|EHD23716.1| tRNA guanosine-2'-O-methyltransferase [Brenneria sp. EniD312]
Length = 230
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + NVSA R+ADA+GV +H V S R +
Sbjct: 1 MTPQRYARIREMLSCRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHRIHAVWPGS--RMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ + L+++G +I TH+ ++ ++D++ PT I++
Sbjct: 59 TLASSAAGSNSWVQVKTHRTIHDAVGHLKTQGMQILATHLSPQSVDFREIDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NG 317
G E G+S EAL L+D IPM GMV S NVSVA ++++ A R ++ G
Sbjct: 119 GQEKTGISKEALRLADRDIIIPMTGMVQSLNVSVACALILYEA--QRQRQMAGMYQRQES 176
Query: 318 DLTSEEKQILLAE 330
L E+Q LL E
Sbjct: 177 PLDDAEQQRLLFE 189
>gi|238755588|ref|ZP_04616925.1| tRNA guanosine-2'-O-methyltransferase [Yersinia ruckeri ATCC 29473]
gi|238706188|gb|EEP98568.1| tRNA guanosine-2'-O-methyltransferase [Yersinia ruckeri ATCC 29473]
Length = 230
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ +H + +++ Y
Sbjct: 4 QRYVRICEMLATRQPDLTVCLEQVHKPHNVSAVIRTADAVGIHQIHAI-WPTTEMY-TLL 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + +S+G +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHPDIGDAVQHFKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S +AL+L+D IPM GMV S NVSVA+ ++++ A R A + LT +
Sbjct: 122 KTGISKQALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYHRASSMLTKD 181
Query: 323 EKQILLAEFSLRHSKSAISIVHEYAKRK 350
E+Q LL E ++ + AKRK
Sbjct: 182 EQQRLLFE-------GGYPVLAQVAKRK 202
>gi|50119000|ref|YP_048167.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium atrosepticum
SCRI1043]
gi|49609526|emb|CAG72959.1| putative tRNA (guanosine-2'-O)-methyltransferase [Pectobacterium
atrosepticum SCRI1043]
Length = 230
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + N+SA R+ADA+GV VH + S R +
Sbjct: 1 MTPQRYARIKEMLNCRQPDLTICMEQVHKPHNISAVIRTADAVGVHQVHAIWPTS--RMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ ++ L++ G ++ T++ A+ ++D++ PT I++
Sbjct: 59 TLVSSAAGSNSWVQVKTHRTIQDAVGHLKNEGMQVLATNLSEHAVDFREIDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NG 317
G E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R ++ G +
Sbjct: 119 GQEKTGITAEALKLADRDIIIPMTGMVQSLNVSVASALILYEA--QRQRQIAGMYQREDS 176
Query: 318 DLTSEEKQILLAE 330
L EE+Q LL E
Sbjct: 177 PLDEEEQQRLLFE 189
>gi|254527012|ref|ZP_05139064.1| tRNA guanosine-2'-O-methyltransferase [Prochlorococcus marinus str.
MIT 9202]
gi|221538436|gb|EEE40889.1| tRNA guanosine-2'-O-methyltransferase [Prochlorococcus marinus str.
MIT 9202]
Length = 223
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 106/192 (55%), Gaps = 4/192 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R ER NV+ R ++ ++VE ++ N+SA R+ DA GV + +S + +
Sbjct: 3 ILPRRFERIKNVLDCRMKNLTVLVEDVNKPHNLSAILRTCDAAGVFEANFIS--KTNAVK 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + + + L+++G+++ T + +++ + D+S T V+
Sbjct: 61 TFNSTAQGSQKWVKLNNHENTITAISDLKNKGFKLYGTTLNSESVDYRNFDYSQNTCFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR-LVGCNGD-L 319
G E G+S+E +S+ D IPM+GMV S NVSVAA IL+ AV R + ++ NG+ L
Sbjct: 121 GAEKWGLSNELISMVDQSIFIPMRGMVQSLNVSVAASILLFEAVRQRKNKGILPANGEGL 180
Query: 320 TSEEKQILLAEF 331
+E Q L E+
Sbjct: 181 NMDEYQKTLFEW 192
>gi|440233087|ref|YP_007346880.1| rRNA methylase [Serratia marcescens FGI94]
gi|440054792|gb|AGB84695.1| rRNA methylase [Serratia marcescens FGI94]
Length = 220
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VCL E + NVSA R+ADA+GV VH V + R R + G+ W++++
Sbjct: 10 TVCL--EQVHKPHNVSAIIRTADAVGVHQVHAVW--PTARMRTLVSSAAGSNSWVNVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ ++ +G +I TH+ A+ D+D++ PT I++G E G+++EAL L+D
Sbjct: 66 PTIGDAVQHMKGQGMQILATHLSDRAVDFRDIDYTRPTCILLGQEKTGITEEALQLADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R A L EE+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYRRDRSMLDDEEQQRLLFE 178
>gi|408372827|ref|ZP_11170526.1| RNA methyltransferase [Alcanivorax hongdengensis A-11-3]
gi|407767179|gb|EKF75617.1| RNA methyltransferase [Alcanivorax hongdengensis A-11-3]
Length = 231
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R + R + ++++G+ N++A R+ DA+G+ V+ S R R
Sbjct: 1 MTPERYRRIRETLDRRQPDLTVIMDGVHKPHNIAAIVRTCDAVGILDVY--SVLPGNRAR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+MG+++W+ +D L++ G ++ H+ DAI ++D++ PTA+++
Sbjct: 59 AAAGTAMGSQRWVQAHQYDDGVSAIRDLQAEGVQVLAAHLSDDAIPYREVDYTRPTALLL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E GV + + + D IPM GMV+SFNVSVAA I++ A R
Sbjct: 119 GTEKFGVGEASAAAVDQNVIIPMMGMVESFNVSVAAAIILAEACEQR 165
>gi|401678142|ref|ZP_10810110.1| rRNA methylase [Enterobacter sp. SST3]
gi|400214510|gb|EJO45428.1| rRNA methylase [Enterobacter sp. SST3]
Length = 218
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIVRTADAVGVHEVHAVW--PGHRMRTMVSAAAGSNSWVSVKSH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ + L+ RG +I T++ A+ ++D++ PT I++G E G+S EAL L+D
Sbjct: 66 QTIGDAVSHLKGRGMQILATNLSAKAVDFREIDYTRPTCILMGQEKTGISQEALDLADRD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R A N L +E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYERSNSMLPEDEQQRLLFE 178
>gi|429218810|ref|YP_007180454.1| rRNA methylase [Deinococcus peraridilitoris DSM 19664]
gi|429129673|gb|AFZ66688.1| rRNA methylase [Deinococcus peraridilitoris DSM 19664]
Length = 218
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH-VVSCDSSKRYREN 203
ER E+ V+ +R S+ +++E + N SA RS DA+GV VH VV Y
Sbjct: 4 ERLEKIKRVLDHRQPSLTVLMEEVHKPHNFSAILRSCDAVGVLEVHAVVPRGGLPTYNAT 63
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S AEKW+ ++ + + L+ RG ++ TH+ A+ ++D++ PT I++G
Sbjct: 64 ---SGSAEKWVSVQRHVSALDAIAQLQERGVQVLATHLSARALDYRELDYTRPTCILLGA 120
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEE 323
E GV+ A SD IPM GMV S NVSVAA ++ A R + L+ E
Sbjct: 121 EKWGVTQAAADASDHNIVIPMLGMVQSLNVSVAAATILFEAQRQRLQGGMYARRQLSDER 180
Query: 324 KQILLAEFS 332
+ LL E++
Sbjct: 181 YEELLFEWA 189
>gi|328949678|ref|YP_004367013.1| tRNA guanosine-2'-O-methyltransferase [Marinithermus hydrothermalis
DSM 14884]
gi|328450002|gb|AEB10903.1| tRNA guanosine-2'-O-methyltransferase [Marinithermus hydrothermalis
DSM 14884]
Length = 223
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRY 200
+ ER + V+ R + +++E + N+SA R+ADA+GV H V+ Y
Sbjct: 1 MTPERYRKLRAVLDKRQPDLTVLMENVHKPHNLSAILRTADAVGVYEAHAVNPTGGVPTY 60
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
E S G+EKW+ + + L+ RG+ + H+ +A+ +D++ P A++
Sbjct: 61 NET---SGGSEKWVYLRVHPDIATAVQHLKERGFLVYAAHLSDEAVDYRAVDYTRPVAVL 117
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+G E GVS EA +L+D IPM GMV S NVSVAA +++ A R
Sbjct: 118 LGAEKWGVSPEAAALADRHIVIPMMGMVQSLNVSVAAAVILFEAQRQR 165
>gi|170076759|ref|YP_001733397.1| RNA methyltransferase [Synechococcus sp. PCC 7002]
gi|169884428|gb|ACA98141.1| RNA methyltransferase, TrmH family [Synechococcus sp. PCC 7002]
Length = 219
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 7/167 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH----VVSCDSS 197
++ R +R + R + +++E + N+SA R+ DA+GV +VH V D
Sbjct: 1 MLSRRYQRICQTLDRRQPDLTVLMEDVHKPHNISAIIRTCDAVGVMAVHAMNQVADGDVL 60
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
Y + V+ G+EKW+D+ + L + ++I H+ A+ +D++ PT
Sbjct: 61 DTYSQ---VAQGSEKWVDLNRHPDVTVAIDQLHQQNFKIYAAHLSDRAVDYRTIDYTQPT 117
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
AI++G E GVSD A L D IPM GMV S NVSVAA +++ A
Sbjct: 118 AILMGAERWGVSDTAAELVDGHIIIPMLGMVQSLNVSVAAAVILFEA 164
>gi|374298531|ref|YP_005050170.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio africanus str.
Walvis Bay]
gi|332551467|gb|EGJ48511.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio africanus str.
Walvis Bay]
Length = 196
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 92/186 (49%), Gaps = 1/186 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +ER R V+ R + LV++ + D NVSA RS DA GV SVH+ S+
Sbjct: 5 ITDERLARIRQVLARRQKGLTLVIDNVHDPHNVSAILRSCDAFGVPSVHLYYTTSAFPVL 64
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S A KW+ + L+ + +++ T A + D S PTA+++
Sbjct: 65 GQKS-SASARKWVMRTRHSDATSMYRGLKDQNFQVLATGFSERAKPLTAWDLSAPTAVIL 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTS 321
GNE+ G S E ++D IPM GMV S NVSVAA I+++ A R + + L+
Sbjct: 124 GNEHNGASPELAQVADGEIYIPMMGMVQSLNVSVAAAIILYEAWRQRWAKGMYDKASLSP 183
Query: 322 EEKQIL 327
EE +L
Sbjct: 184 EELALL 189
>gi|167622328|ref|YP_001672622.1| tRNA guanosine-2'-O-methyltransferase [Shewanella halifaxensis
HAW-EB4]
gi|167352350|gb|ABZ74963.1| tRNA guanosine-2'-O-methyltransferase [Shewanella halifaxensis
HAW-EB4]
Length = 228
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ NR + + ++ + N++A R+ADA G+ VH V + R N
Sbjct: 4 ERFARINQMLDNRQPDLTVCLDTVHKGNNIAAVLRTADAAGIHEVHAVWSELEMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ + + ++ + R + +I T A+ ++D++ PTAI++GNE
Sbjct: 63 -TASGSQQWVKTRVHQSMQQAVDEFRGKEMQILATTFSDTAVDFREIDYTRPTAIILGNE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
GVS ++ +D IPM GMV S NVSVAA ++M+ A
Sbjct: 122 RDGVSPAGIAAADQHIIIPMIGMVQSLNVSVAAALIMYEA 161
>gi|448244541|ref|YP_007408594.1| tRNA guanosine-2'-O-methyltransferase [Serratia marcescens WW4]
gi|445214905|gb|AGE20575.1| tRNA guanosine-2'-O-methyltransferase [Serratia marcescens WW4]
Length = 220
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 10/175 (5%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VCL E + NVSA R+ADA+GV VH V + R R + G+ W+ ++
Sbjct: 10 TVCL--EQVHKPHNVSAIIRTADAVGVHQVHAVW--PTTRMRTLVSSAAGSNSWVSVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+++G +I T++ A+ ++D++ PT +++G E G+++EAL+L+D
Sbjct: 66 RTIGDAVGHLKAQGMQILATNLSARAVDFREVDYTRPTCVLLGQEKTGITEEALALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NGDLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R + G N L EE+Q LL E
Sbjct: 126 IVIPMIGMVQSLNVSVASALILYEA--QRQRQNAGLYRRDNSMLDEEEQQRLLFE 178
>gi|33862541|ref|NP_894101.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus str. MIT
9313]
gi|33640654|emb|CAE20443.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9313]
Length = 245
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R +R V+ R + +++E + N+SA RS DA+GV H V + S R
Sbjct: 19 LLPRRFDRLKAVLDCRMADLTVLLEHVEKPHNLSAILRSCDAVGVLEAHAV--NYSGRLP 76
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ ++ + ++ G+R+ TH+G +A D D+ PTA V+
Sbjct: 77 TFNSTAQGSQKWIPLKEHSSIEVAVKAIKDSGFRLYGTHLGGNARDYRDCDFCEPTAFVL 136
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
G E G+S A L D IPM GMV S NVSVAA L+ A+ R RL G
Sbjct: 137 GAEKWGLSKLATPLMDEGIFIPMSGMVQSLNVSVAAATLLFEAL--RQRRLAG 187
>gi|398797253|ref|ZP_10556576.1| rRNA methylase [Pantoea sp. GM01]
gi|398103373|gb|EJL93543.1| rRNA methylase [Pantoea sp. GM01]
Length = 231
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + + +E + NVSA R+ADA+G+ VH V S R R
Sbjct: 4 QRFARIQEMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSVRMRTMV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S G+ W+ ++ E L+ G ++ T++ A+ ++D++ PT I++G E
Sbjct: 62 SASAGSNSWVKVKTHRHIAEAVRHLKDEGMQVLATNLSAKAVDFREVDYTKPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G++ EAL+L+D +PM GMV S NVSVA+ ++++ A R
Sbjct: 122 KTGITAEALALADQDIIVPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|238759850|ref|ZP_04621006.1| tRNA guanosine-2'-O-methyltransferase [Yersinia aldovae ATCC 35236]
gi|238701911|gb|EEP94472.1| tRNA guanosine-2'-O-methyltransferase [Yersinia aldovae ATCC 35236]
Length = 230
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + +E + NVSA R+ADA+G+ VH + + R +
Sbjct: 4 QRYARICEMLTTRQPDLTVCLEEVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLSS 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ L+S+ +I TH+ A+ ++D++ PT I++G E
Sbjct: 64 --AAGSNSWVQVKTHTHIAGAIAHLKSQDMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S+EAL+L+D IPM GMV S NVSVA+ ++++ A R A L+
Sbjct: 122 KTGISEEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRTQSVLSEN 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|124023764|ref|YP_001018071.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus str. MIT
9303]
gi|123964050|gb|ABM78806.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9303]
Length = 229
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R +R V+ R + +++E + N+SA RS DA+GV H V + S R
Sbjct: 3 LLPRRFDRLKAVLDCRMADLTVLLEHVEKPHNLSAILRSCDAVGVLEAHAV--NYSGRLP 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ ++ + ++ G+R+ TH+G +A D D+ PTA V+
Sbjct: 61 TFNSTAQGSQKWIPLKEHSSIEVAVKAIKESGFRLYGTHLGGNARDYRDCDFCEPTAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
G E G+S+ A L D IPM GMV S NVSVAA L+ A+ R RL G
Sbjct: 121 GAEKWGLSELATPLMDEGIFIPMCGMVQSLNVSVAAATLLFEAL--RQRRLAG 171
>gi|90021648|ref|YP_527475.1| tRNA (guanosine-2'-O-)-methyltransferase [Saccharophagus degradans
2-40]
gi|89951248|gb|ABD81263.1| tRNA (guanosine-2'-O-)-methyltransferase [Saccharophagus degradans
2-40]
Length = 224
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH-VVSCDSSKRY 200
+ ER R +V+ R + ++ E + N+SA R+ DA+G+ VH VV + Y
Sbjct: 1 MTPERLSRIRSVLDQRQPDLTVITEEVQKGRNLSAIIRTCDAVGIPEVHSVVPREGFTSY 60
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
+ A KW+DI + E L +GY+I HV +A ++D++ PTA++
Sbjct: 61 NGT---AASAHKWVDIHHYSTALEPITALTQQGYQIVAAHVDRNAKDFREIDYTKPTALL 117
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVA-AGILM 301
+G E GVS+ A L +PM GM++S+NVSVA AGIL+
Sbjct: 118 MGAEIWGVSEPARELVTHTIHLPMVGMIESYNVSVACAGILL 159
>gi|88799008|ref|ZP_01114589.1| putative tRNA methyltransferase [Reinekea blandensis MED297]
gi|88778235|gb|EAR09429.1| putative tRNA methyltransferase [Reinekea sp. MED297]
Length = 224
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R +F V+ R + ++ + + NVSA R+AD++G+ +VH+V + + H
Sbjct: 5 RYLKFQQVLNQRQNDMTILTDKVHKSQNVSAIMRTADSVGIPTVHMVKPERGRLVYH--H 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ GA +++D+ +++ E LR+ G + H AIS + D++ P A+++G E
Sbjct: 63 TAGGASRFVDVIVYETLSEGIQSLRNAGMALYAAHWSDRAISYREADYTRPFALILGAEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G+S EA +D IPM G +S NVSVA+GI++ A+ R
Sbjct: 123 YGISPEAADAADEHLIIPMVGACESLNVSVASGIILQEAMHQR 165
>gi|398796171|ref|ZP_10555799.1| rRNA methylase [Pantoea sp. YR343]
gi|398204023|gb|EJM90835.1| rRNA methylase [Pantoea sp. YR343]
Length = 231
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + + +E + NVSA R+ADA+G+ VH V S R R
Sbjct: 4 QRFARIQEMLALRQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSVRMRTMV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S G+ W+ ++ + L+ G ++ T++ A+ ++D++ PT I++G E
Sbjct: 62 AASAGSNSWVKVKTHQHIADAVRHLKDEGMQVLATNLSAKAVDFREIDYTKPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G++ EAL+L+D +PM GMV S NVSVA+ ++++ A R
Sbjct: 122 KTGITSEALALADQDIIVPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|312170608|emb|CBX78871.1| putative RNA methylase [Erwinia amylovora ATCC BAA-2158]
Length = 231
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + + +E + NVSA R+ADA+GV VH V S R R
Sbjct: 4 QRYARIRAMLAARQHDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPGS--RMRTMV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + + L+ + +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SSAAGSNSWVQVKTHRSIADAVTCLKGQNMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSE-- 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R + + T E
Sbjct: 122 KTGITREALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYMREESTLEYS 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|325279827|ref|YP_004252369.1| tRNA/rRNA methyltransferase (SpoU) [Odoribacter splanchnicus DSM
20712]
gi|324311636|gb|ADY32189.1| tRNA/rRNA methyltransferase (SpoU) [Odoribacter splanchnicus DSM
20712]
Length = 223
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 9/222 (4%)
Query: 130 SSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSV 189
S E VE L ++++E+ F +++ R+ V +V+E L N SA RSAD G+Q V
Sbjct: 3 SIKEQVEYLRDFVVDEKNALFDRLIQERTDYVTVVLEDLFQSHNQSAVMRSADCYGIQHV 62
Query: 190 HVVSCDSSKRYRENRHVSMGAEKWLDI----ELWDAPRECFNVLRSRGYRIATTHVGMDA 245
H++ +S Y VS GA WL I EL + + + LR+ GYRI T +
Sbjct: 63 HLIENRNS--YDMTSTVSQGARDWLSIHRHKELENNTQATIDQLRAEGYRILATTPHAND 120
Query: 246 ISVYDMDWS-CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
I V D+D A G E G+SD + +D IPM G +S NVSV A I M+
Sbjct: 121 IFVDDIDLEKGKMAFFFGTELTGLSDLVIGQADEFVKIPMYGFTESLNVSVCAAITMYSV 180
Query: 305 VCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEY 346
R R G + L+ K +L ++ K++ I+ +
Sbjct: 181 T--RRLRGSGIDWHLSDRAKDEILFKWYKNAIKASGEILERF 220
>gi|329296824|ref|ZP_08254160.1| tRNA guanosine-2'-O-methyltransferase [Plautia stali symbiont]
Length = 239
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDI 216
R + + + +E + NVSA R+ADA+G+ VH V S R R S G+ W+ +
Sbjct: 2 RQHDLTVCMEQVHKPHNVSAVIRTADAVGIHEVHAVW--PSVRMRTMVSASAGSNSWVKV 59
Query: 217 ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLS 276
+ + L+ RG ++ TH+ A+ ++D++ PT I++G E G++ EAL+L+
Sbjct: 60 KTHRHIADAVRHLKDRGMQVLATHLSDKAVDFREIDYTKPTCILMGKEKTGITAEALALA 119
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D IP+ GMV S NVSVA+ ++++ A R
Sbjct: 120 DRDIIIPIVGMVQSLNVSVASALILYEAQRQR 151
>gi|407452569|ref|YP_006724294.1| rRNA methylase [Riemerella anatipestifer RA-CH-1]
gi|403313553|gb|AFR36394.1| rRNA methylase [Riemerella anatipestifer RA-CH-1]
Length = 231
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 8/214 (3%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
L+ +L EER ++ + + S + V+E + + N +A RS +A V V+ +
Sbjct: 19 LAQFLTEERLQKINHYAEESSDFILPVMEDVYQYRNAAAIVRSVEACAFHKV--VALEKD 76
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
+ N V+ GA+ W+++E + ++ RGY+I +A+ + D P
Sbjct: 77 NIFDPNLSVTKGADTWVEVEKMPRNKASLEKIKERGYKIVAVSPENNAMMLPDYKVETPI 136
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
A+V G E GVSDE L +D +IPM G SFNVSVAA I M+ + +L+
Sbjct: 137 ALVFGTEWEGVSDELLDFADETLAIPMYGFTKSFNVSVAAAICMY----ELKQKLLNSTI 192
Query: 318 D--LTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
D L+ +EK +++ +S I H++ +
Sbjct: 193 DYKLSPDEKWHTKIRWAVNSIRSGEEIYHKFLRE 226
>gi|294638299|ref|ZP_06716552.1| tRNA guanosine-2'-O-methyltransferase [Edwardsiella tarda ATCC
23685]
gi|291088552|gb|EFE21113.1| tRNA guanosine-2'-O-methyltransferase [Edwardsiella tarda ATCC
23685]
Length = 219
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V S R + + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAVIRTADAVGVHQVHAVWPGKSMRTLVS--TAAGSNSWVSVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ +G +I T++ A+ ++D++ PT I++G E RG+S EAL L+D
Sbjct: 66 RDIASAVSELKGQGMQILATNLSATAVDFREIDYTRPTCILMGQEKRGISAEALQLADRD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R A L+ EE+Q LL E
Sbjct: 126 IIIPMVGMVQSLNVSVASALILYEAQRQRQQAGMYQHHQPRLSDEEQQRLLWE 178
>gi|292486540|ref|YP_003529406.1| RNA methylase [Erwinia amylovora CFBP1430]
gi|292897775|ref|YP_003537144.1| tRNA (guanosine-2'-O)-methyltransferase [Erwinia amylovora ATCC
49946]
gi|428783460|ref|ZP_19000956.1| putative RNA methylase [Erwinia amylovora ACW56400]
gi|291197623|emb|CBJ44717.1| tRNA (guanosine-2'-O)-methyltransferase [Erwinia amylovora ATCC
49946]
gi|291551953|emb|CBA18990.1| putative RNA methylase [Erwinia amylovora CFBP1430]
gi|426277951|gb|EKV55673.1| putative RNA methylase [Erwinia amylovora ACW56400]
Length = 231
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R ++ R + + + +E + NVSA R+ADA+GV VH + S R R
Sbjct: 4 QRYARIRAMLAARQHDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAIWPGS--RMRTMV 61
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + + L+ +I TH+ A+ ++D++ PT I++G E
Sbjct: 62 SAAAGSNSWVQVKTHRSIADAVTCLKGHNMQILATHLSDKAVDFREIDYTRPTCILMGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSE-- 322
G++ EAL L+D IPM GMV S NVSVA+ ++++ A R + + T E
Sbjct: 122 KTGITREALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYMREESTLEYS 181
Query: 323 EKQILLAE 330
E+Q LL E
Sbjct: 182 EQQRLLFE 189
>gi|218297230|ref|ZP_03497886.1| tRNA guanosine-2'-O-methyltransferase [Thermus aquaticus Y51MC23]
gi|218242423|gb|EED08963.1| tRNA guanosine-2'-O-methyltransferase [Thermus aquaticus Y51MC23]
Length = 194
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRYRENRHVSMGAEKWLDIELW 219
+ +++E + N+SA R+ DA+G+ H V+ + E S G+ KW+ +E+
Sbjct: 23 LTVLMENVHKPHNLSAILRTCDAVGILQAHAVNPTGGVPTFNET---SGGSHKWVYLEVH 79
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
F LR RG+ + T + A ++D++ PTAIV+G E GVS+EAL+L+D
Sbjct: 80 PTTEAAFRHLRERGFSVYATALKEGARDYREVDYTRPTAIVLGAEKWGVSEEALALADGL 139
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
IPM GMV S NVSVAA +++ A R
Sbjct: 140 IHIPMLGMVQSLNVSVAAAVILFEAQRQR 168
>gi|452853961|ref|YP_007495645.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio piezophilus]
gi|451897615|emb|CCH50494.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio piezophilus]
Length = 196
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 3/172 (1%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
+S + E+RK++ V+ R + LV++ + D NVSA RS DA GV VH+ +S
Sbjct: 1 MSRKITEKRKQKIDKVLSQRQKDLTLVMDNIWDPHNVSAVLRSCDAFGVFDVHLYYT-TS 59
Query: 198 KRYRENRHVSMGAEKWLD-IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP 256
+ + S A+KW+ + DA + LR G ++ T A V D D++ P
Sbjct: 60 QWPDLGKKSSASAKKWIRRVRHIDA-ESMISQLRQDGGQVLRTGFSSTARPVMDFDFTRP 118
Query: 257 TAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
T+I++ NE+ G + E L IPM GMV SFNVSVAA I+++ A R
Sbjct: 119 TSIILSNEHNGTAPEIAELVQDEIYIPMHGMVQSFNVSVAAAIILYEASTQR 170
>gi|288550202|ref|ZP_05969599.2| hypothetical protein ENTCAN_08219 [Enterobacter cancerogenus ATCC
35316]
gi|288316108|gb|EFC55046.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cancerogenus
ATCC 35316]
Length = 218
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V + R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIVRTADAVGVHEVHAVWPGA--RMRTMVSAAAGSNSWVSVKSH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ + L+ RG ++ T++ A+ ++D++ PT I++G E G+S EAL L+D
Sbjct: 66 QTIGDAVSHLKGRGMQVLATNLSDKAVDFREIDYTRPTCILMGQEKTGISQEALDLADRD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R A + L EE+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYARSSSMLPDEEQQRLLFE 178
>gi|91794292|ref|YP_563943.1| tRNA guanosine-2'-O-methyltransferase [Shewanella denitrificans
OS217]
gi|91716294|gb|ABE56220.1| tRNA (guanosine-2'-O-)-methyltransferase [Shewanella denitrificans
OS217]
Length = 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ NR + + ++ + N++A RSAD +G+ +H V D R N
Sbjct: 4 ERFARINQMLDNRQIDLTVCLDKVHKTNNIAAVIRSADCVGIHQIHAVWPDIDMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ E ++ +I TT A+ D+D++ PTAIV+GNE
Sbjct: 63 -TASGSQQWVKTIKHYRFEEAEQAFNAQNMQILTTTFSDTAVDYRDIDYTKPTAIVMGNE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
G S EA++ + IPM GMV S NVSVAA ++M+ A
Sbjct: 122 RDGTSPEAIAAASQHILIPMIGMVQSLNVSVAAALVMYEA 161
>gi|296133375|ref|YP_003640622.1| TrmH family RNA methyltransferase [Thermincola potens JR]
gi|296031953|gb|ADG82721.1| RNA methyltransferase, TrmH family, group 3 [Thermincola potens JR]
Length = 268
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%)
Query: 162 CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDA 221
L+++ + D GN+ R+ADA GV V +V + + +MG+ + I +D+
Sbjct: 117 LLIIDKVQDPGNLGTIIRTADAAGVTGVALVKGTADLYNPKTLRATMGSVFHVPIINFDS 176
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
E ++ + G ++ T + D+ S +D+S P A+VVGNE RG S A+ SD R +
Sbjct: 177 IEEACHLAKKHGLKLIVTDISKDSSSYLAVDYSEPVALVVGNEARGASSFAIENSDYRVA 236
Query: 282 IPMKGMVDSFNVSVAAGILMHHAVCDRA 309
I M G +S NVSVAAGI++ A RA
Sbjct: 237 IKMPGKAESLNVSVAAGIILFEAARQRA 264
>gi|253690572|ref|YP_003019762.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|403056463|ref|YP_006644680.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|251757150|gb|ACT15226.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|402803789|gb|AFR01427.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 230
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + N+SA R+ADA+GV VH + S R +
Sbjct: 1 MTPQRYARIKEMLNCRQPDLTICMEQVHKPHNISAVIRTADAVGVHQVHAIWPTS--RMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ + L++ G ++ T++ A+ ++D++ PT I++
Sbjct: 59 TLVSSAAGSNSWVQVKTHRNIGDAVGHLKAEGMQVLATNLSEHAVDFREIDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NG 317
G E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R ++ G +
Sbjct: 119 GQEKTGITAEALKLADRDIIIPMTGMVQSLNVSVASALILYEA--QRQRQIAGMYQREDS 176
Query: 318 DLTSEEKQILLAE 330
L EE+Q LL E
Sbjct: 177 PLDEEEQQRLLFE 189
>gi|189346347|ref|YP_001942876.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium limicola DSM 245]
gi|189340494|gb|ACD89897.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium limicola DSM 245]
Length = 219
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER + ++ R S+ +V++ ++ N++A RS DA G+ +H VS +++ R
Sbjct: 5 ERFRKIRQMLLRRQTSLTVVMDNVNKSHNLAALVRSCDAAGIHEIHAVS---RRKHIFTR 61
Query: 205 H-VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
H + G+ KW++I L+ + LR G ++ ++ ++D++ PTA+++G
Sbjct: 62 HNAAAGSSKWVNINLYHDIESVYRRLRDDGMQVLAAASTEKSVDFREIDYTLPTALILGA 121
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEE 323
E G+S++A+S +D +PM GMV+S NVSVA ++++ A R + + + LT +
Sbjct: 122 EWDGISEDAISGADRCIGVPMFGMVESLNVSVAGAVIIYEAQRQRLLKGMYGSPALTQTQ 181
Query: 324 KQILLAEFS 332
LL E +
Sbjct: 182 MNRLLFEHT 190
>gi|257146495|emb|CAX30784.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Conomelus anceps]
gi|257146515|emb|CAX30799.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Delphacidae sp.]
Length = 239
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R V+ R + + +E + N+SA R+ADA+G+ +H + C +S +
Sbjct: 4 KRYARIRQVIAMRQPDLTVCLENVHKPHNISAVIRTADAVGIPQIHAIWCKNSSKSLSA- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ + + + ++ G +I H+ AI +D++ PT I++G E
Sbjct: 63 -AAAGSNHWVKVRTHASIENAISTCKAAGMQILAAHLTNQAIDFRQIDYNQPTCIILGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S +AL+L+D IPM GMV S NVSVA+ ++++ A R A L+ E
Sbjct: 122 RAGISKQALALADHNIHIPMMGMVQSLNVSVASALILYEAQRQRQNANMYDSLFSQLSEE 181
Query: 323 EKQILLAE 330
E+Q L E
Sbjct: 182 EQQAWLFE 189
>gi|428776587|ref|YP_007168374.1| tRNA guanosine-2'-O-methyltransferase [Halothece sp. PCC 7418]
gi|428690866|gb|AFZ44160.1| tRNA guanosine-2'-O-methyltransferase [Halothece sp. PCC 7418]
Length = 223
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRY 200
++ R R V+ R + +++E + N SA R+ DA+GV S H V + +
Sbjct: 7 VLPRRYHRLREVLNRRQTDLTVLLEDVHKPHNFSAIIRTCDAVGVFSAHGVYTEGDVPAF 66
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
E + G++KW+DI + L+++ + I H+ +A+ D++ PT I+
Sbjct: 67 SET---AKGSQKWVDIHTHPDLKTAIGHLKNQNHTIYAAHLTENAVDYRQPDYTQPTCIL 123
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+G E GVS+EA+SL D IPM GMV S NVSVAA +++ A R
Sbjct: 124 LGAEKWGVSEEAISLVDQAIYIPMFGMVQSLNVSVAAAVILFEAQRQR 171
>gi|167753955|ref|ZP_02426082.1| hypothetical protein ALIPUT_02240 [Alistipes putredinis DSM 17216]
gi|167658580|gb|EDS02710.1| RNA methyltransferase, TrmH family [Alistipes putredinis DSM 17216]
Length = 228
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 5/173 (2%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
+E LS ++ EER++ + +R+ + ++ E N SA R +A GVQ +H
Sbjct: 13 AERTAYLSEFMSEERRQVLQRTLDSRTRYMTILTENTYHAQNASALVRHCEAFGVQDIHT 72
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATT--HVGMDAISVY 249
+ ++ ++ N ++ G +KW+D+ E L+ RGYRI T H +
Sbjct: 73 I--ETRCKFNPNVNIVRGTDKWIDLHRHRTTAEAIADLKGRGYRIVATTPHREDKTPETF 130
Query: 250 DMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
D+ + P +V G E+ G+SDE ++ +D IPM GMV+S NVS +A IL++
Sbjct: 131 DVA-ASPFVLVFGTEHAGISDEIVAAADEFLRIPMCGMVESLNVSASAAILIY 182
>gi|159902962|ref|YP_001550306.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9211]
gi|159888138|gb|ABX08352.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9211]
Length = 229
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R ++ +++ R + ++VE + N+SA R+ DA GV H V+ ++ + R
Sbjct: 3 LLPRRFKKLKSILNRRISDLTILVEQVEKPHNLSAIMRTCDAAGVLEAHAVARET--KTR 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ ++ L+ +G+++ T++ +DAI D++ PTA V+
Sbjct: 61 TFNSTAQGSQKWVPLKDHKNIEAAALFLKKQGFKLYGTNLSVDAIDYRYCDYTGPTAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E G+S+ A L D IPM+GMV S NVSVAA L+ A+ R
Sbjct: 121 GAEKWGLSEPATRLMDAAIYIPMRGMVQSLNVSVAASALLFEALRQR 167
>gi|123968010|ref|YP_001008868.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
AS9601]
gi|123198120|gb|ABM69761.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
AS9601]
Length = 223
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 13/214 (6%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R ER +V+ R ++ ++VE ++ N+SA R+ DA GV + +S + +
Sbjct: 3 ILPRRFERIKSVLDCRMKNLTVLVEDVNKPHNLSAILRTCDAAGVFEANFIS--KTNAVK 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + + + L+++G+++ T + +++ + D+S T V+
Sbjct: 61 TFNSTAQGSQKWVKLNNHENTITAISDLKNKGFKLYGTTLNSESVDYRNFDYSQNTCFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR-LVGCNGD-L 319
G E G+S+E +S+ D IPM+GMV S NVSVAA IL+ AV R + ++ NG+ L
Sbjct: 121 GAEKWGLSNELISMVDQSIFIPMRGMVQSLNVSVAASILLFEAVRQRKNKGILPANGEGL 180
Query: 320 TSEEKQILL-----AEFSLRHSKSAISIVHEYAK 348
+E Q L E + + KSAI EY K
Sbjct: 181 NMDEYQKTLFEWCYPELAEVYKKSAI----EYPK 210
>gi|257146507|emb|CAX30793.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Glycaspis brimblecombei]
gi|257146511|emb|CAX30796.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Diaphorina citri]
Length = 239
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R V+ R + + +E + N+SA R+ADA+G+ +H + C +S +
Sbjct: 4 KRYARIRQVIAMRQPDLTVCLENVHKPHNISAVIRTADAVGIPQIHAIWCKNSSKSLSA- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ + + + ++ G +I H+ AI +D++ PT I++G E
Sbjct: 63 -AAAGSNHWVKVRTHASIENAISACKAAGIQILAAHLTNQAIDFRQIDYNQPTCIILGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
G+S +AL+L+D IPM GMV S NVSVA+ ++++ A R A L+ E
Sbjct: 122 RAGISKQALALADHNIHIPMMGMVQSLNVSVASALILYEAQRQRQNANMYDSLFSQLSEE 181
Query: 323 EKQILLAE 330
E+Q L E
Sbjct: 182 EQQAWLFE 189
>gi|386322240|ref|YP_006018402.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|416111225|ref|ZP_11592482.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Riemerella
anatipestifer RA-YM]
gi|442315047|ref|YP_007356350.1| rRNA methylase [Riemerella anatipestifer RA-CH-2]
gi|315022826|gb|EFT35850.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Riemerella
anatipestifer RA-YM]
gi|325336783|gb|ADZ13057.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|441483970|gb|AGC40656.1| rRNA methylase [Riemerella anatipestifer RA-CH-2]
Length = 231
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
++ + L+ +L EER ++ + + S + V+E + + N +A RS +A V V
Sbjct: 14 KIFQYLAQFLTEERLQKINHYAEESSDFILPVMEDVYQYRNAAAIVRSVEACAFHKV--V 71
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
+ + + N V+ GA+ W+++E + ++ RGY+I +A + D
Sbjct: 72 ALEKDNVFDPNLSVTKGADTWVEVEKMPRNKASLEKIKERGYKIVAVSPENNATMLPDYK 131
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
P A+V G E GVSDE L +D +IPM G SFNVSVAA I M+
Sbjct: 132 VETPIALVFGTEWEGVSDELLDFADETLAIPMYGFTKSFNVSVAAAICMYE 182
>gi|227327134|ref|ZP_03831158.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 230
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 8/193 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ +R R ++ R + + +E + NVSA R+ADA+GV +H + S R +
Sbjct: 1 MTPQRYARIKEMLNCRQPDLTICMEQVHKPHNVSAVIRTADAVGVHEIHAIWPTS--RMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ + L++ G ++ T++ A+ ++D++ PT I++
Sbjct: 59 TLVSSAAGSNSWVQVKTHRNIGDAVGHLKAEGMQVLATNLSEHAVDFREIDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC----NG 317
G E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R ++ G +
Sbjct: 119 GQEKTGITAEALKLADRDIIIPMTGMVQSLNVSVASALILYEA--QRQRQIAGMYQREDS 176
Query: 318 DLTSEEKQILLAE 330
L EE+Q LL E
Sbjct: 177 PLDEEEQQRLLFE 189
>gi|157412835|ref|YP_001483701.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9215]
gi|157387410|gb|ABV50115.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9215]
Length = 223
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 106/192 (55%), Gaps = 4/192 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R ER +V+ R ++ ++VE ++ N+SA R+ DA GV + +S + +
Sbjct: 3 ILPRRFERIKSVLDCRMKNLTVLVEDVNKPHNLSAILRTCDAAGVFEANFIS--KTNAVK 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + + + + L+++G+++ T + ++ + D+S T V+
Sbjct: 61 TFNSTAQGSQKWVKLNNHENTIKAISDLKNKGFKLYGTTLNSKSVDYRNFDYSQNTCFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR-LVGCNGD-L 319
G E G+S+E +S+ D IPM+GMV S NVSVAA IL+ AV R + ++ NG+ L
Sbjct: 121 GAEKWGLSNELISMVDQSIFIPMRGMVQSLNVSVAASILLFEAVRQRKNKGILPANGEGL 180
Query: 320 TSEEKQILLAEF 331
+E Q L E+
Sbjct: 181 NMDEYQKTLFEW 192
>gi|374385341|ref|ZP_09642848.1| hypothetical protein HMPREF9449_01234 [Odoribacter laneus YIT
12061]
gi|373225832|gb|EHP48160.1| hypothetical protein HMPREF9449_01234 [Odoribacter laneus YIT
12061]
Length = 225
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 9/179 (5%)
Query: 130 SSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSV 189
+ E VE L ++ +E+ F +++ R+ V LV+E L N SA R+AD +GVQSV
Sbjct: 3 TEQEKVEYLKNFVTDEKNALFSRLIRERTEYVTLVLEDLYQSHNQSAVMRTADCMGVQSV 62
Query: 190 HVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRE----CFNVLRSRGYR-IATTHVGMD 244
H++ ++ +Y VS GA +WL + + + LR +GYR IATT D
Sbjct: 63 HII--ENRNKYDVTSTVSQGAREWLTLHRYRGEKNNTPAALRQLRQQGYRIIATTPHSRD 120
Query: 245 AISVYDMDW-SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
+ + D+D A G E G+S++ + +D +PM G +S NVSV A ++M+
Sbjct: 121 TL-IDDLDLKKGKMAFFFGTELTGLSEDVIREADEFVKVPMYGFTESLNVSVCAALIMY 178
>gi|322835058|ref|YP_004215085.1| tRNA guanosine-2'-O-methyltransferase [Rahnella sp. Y9602]
gi|384260280|ref|YP_005404214.1| tRNA guanosine-2'-O-methyltransferase [Rahnella aquatilis HX2]
gi|321170259|gb|ADW75958.1| tRNA guanosine-2'-O-methyltransferase [Rahnella sp. Y9602]
gi|380756256|gb|AFE60647.1| tRNA guanosine-2'-O-methyltransferase [Rahnella aquatilis HX2]
Length = 232
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R ++ R + + +E + NVSA R+ADA+GV +H V + R +
Sbjct: 1 MTPERYARIREMLAARQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEIHAVW--PTTRMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ ++ ++ ++++G +I T++ A+ +D++ PT I++
Sbjct: 59 TLVSSAAGSNSWVQVKTHKTIQDAVAKMKAKGMQILATNLSEKAVDFRAIDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 119 GQEKTGITPEALALADSDIIIPMIGMVQSLNVSVASALILYEAQRQR 165
>gi|170026386|ref|YP_001722891.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
YPIII]
gi|186893379|ref|YP_001870491.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
PB1/+]
gi|294502145|ref|YP_003566207.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis Z176003]
gi|384120628|ref|YP_005503248.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis D106004]
gi|384124506|ref|YP_005507120.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis D182038]
gi|420554995|ref|ZP_15052105.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-03]
gi|420563318|ref|ZP_15059382.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-04]
gi|420607070|ref|ZP_15098884.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-12]
gi|420609002|ref|ZP_15100635.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-13]
gi|420624974|ref|ZP_15114846.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-16]
gi|420640561|ref|ZP_15128900.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-29]
gi|420657061|ref|ZP_15143825.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-36]
gi|420672527|ref|ZP_15157774.1| spoU rRNA Methylase family protein [Yersinia pestis PY-45]
gi|420677684|ref|ZP_15162478.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-46]
gi|420706892|ref|ZP_15187761.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-55]
gi|420736811|ref|ZP_15214329.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-61]
gi|420738361|ref|ZP_15215716.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-63]
gi|420749487|ref|ZP_15225345.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-65]
gi|420776189|ref|ZP_15248733.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-88]
gi|420792554|ref|ZP_15263211.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-91]
gi|420802773|ref|ZP_15272404.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-92]
gi|420803072|ref|ZP_15272667.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-93]
gi|420814052|ref|ZP_15282547.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-95]
gi|420818892|ref|ZP_15286966.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-96]
gi|420834903|ref|ZP_15301340.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-100]
gi|420856430|ref|ZP_15320412.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-113]
gi|169752920|gb|ACA70438.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
YPIII]
gi|186696405|gb|ACC87034.1| tRNA/rRNA methyltransferase (SpoU) [Yersinia pseudotuberculosis
PB1/+]
gi|262360224|gb|ACY56945.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis D106004]
gi|262364170|gb|ACY60727.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis D182038]
gi|294352604|gb|ADE62945.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis Z176003]
gi|391438729|gb|EIQ99448.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-03]
gi|391441572|gb|EIR02049.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-04]
gi|391474947|gb|EIR32190.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-12]
gi|391498496|gb|EIR53261.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-13]
gi|391513511|gb|EIR66719.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-16]
gi|391529889|gb|EIR81525.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-29]
gi|391534640|gb|EIR85803.1| spoU rRNA Methylase family protein [Yersinia pestis PY-45]
gi|391546210|gb|EIR96223.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-36]
gi|391548726|gb|EIR98496.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-46]
gi|391587478|gb|EIS32634.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-55]
gi|391610974|gb|EIS53198.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-61]
gi|391622038|gb|EIS63013.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-63]
gi|391632469|gb|EIS71987.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-65]
gi|391663547|gb|EIS99380.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-88]
gi|391673279|gb|EIT08016.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-91]
gi|391674066|gb|EIT08707.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-92]
gi|391687627|gb|EIT20918.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-93]
gi|391701828|gb|EIT33784.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-95]
gi|391705577|gb|EIT37104.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-96]
gi|391721086|gb|EIT51058.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-100]
gi|391737867|gb|EIT65717.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-113]
Length = 219
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VCL E + NVSA R+ADA+G+ VH + + R + + G+ W+ ++
Sbjct: 10 TVCL--EQVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLS--AAAGSNSWVQVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+S+ +I TH+ A+ ++D++ PT I++G E G+S EAL+L+D
Sbjct: 66 PHIADAIAYLKSQDMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISPEALALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAE 330
IPM GMV S NVSVA+ ++++ A R A + L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYKRTHSVLAESEQQRLLFE 178
>gi|417286118|ref|ZP_12073409.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
TW07793]
gi|386251359|gb|EII97526.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
TW07793]
Length = 206
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V S R R + G+ W+ ++ + L+ +
Sbjct: 9 NVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQ 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TH+ +A+ ++D++ T I++G E G++ EAL+L+D IPM GMV S N
Sbjct: 67 GMQILATHLSDNAVDFREIDYTRSTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPETEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|291326958|ref|ZP_06126486.2| tRNA guanosine-2'-O-methyltransferase [Providencia rettgeri DSM
1131]
gi|291312042|gb|EFE52495.1| tRNA guanosine-2'-O-methyltransferase [Providencia rettgeri DSM
1131]
Length = 226
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 15/198 (7%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDI 216
R + L +E + NVSA RSADA+G+ +H + D ++ + + + G+ W+ I
Sbjct: 5 RQPDLTLCLEEIHKPHNVSAIVRSADAVGIHQIHAIWPD--QQVKLSVSSAAGSNSWVKI 62
Query: 217 ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLS 276
+ E ++S+ ++ T++ A+ ++D++ PT I++G E G+S +AL+L+
Sbjct: 63 ISHTSTEEAIAHIKSQNMQVLATNLSEHAVDFREIDYTLPTCIMMGQEKTGISQQALALA 122
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGD----LTSEEKQILLAEFS 332
D IPM GMV S NVSVA+ ++++ A R + G L+ +E+Q L E
Sbjct: 123 DKHIIIPMAGMVQSLNVSVASALILYEA--QRQRQQAGMYKRDHCLLSPDEQQTWLFE-- 178
Query: 333 LRHSKSAISIVHEYAKRK 350
++ E AKRK
Sbjct: 179 -----GGYPVLAEVAKRK 191
>gi|157963692|ref|YP_001503726.1| tRNA guanosine-2'-O-methyltransferase [Shewanella pealeana ATCC
700345]
gi|157848692|gb|ABV89191.1| tRNA guanosine-2'-O-methyltransferase [Shewanella pealeana ATCC
700345]
Length = 228
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ NR + + ++ + N++A R+ADA G+ VH V + R N
Sbjct: 4 ERFARINQMLDNRQPDLTVCLDTVHKGNNIAAVLRTADAAGIHEVHAVWSELEMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ + + + R + +I T A+ +D++ PT +++GNE
Sbjct: 63 -TASGSQQWVKTRVHQSMAQAVEAFRDQDMQILATTFSDTAVDFRAIDYTKPTVVIMGNE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
GVS E ++ +D IPM GMV S NVSVAA ++M+ A
Sbjct: 122 RDGVSPEGIAAADQHIIIPMIGMVQSLNVSVAAALIMYEA 161
>gi|313205776|ref|YP_004044953.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485093|ref|YP_005394005.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|312445092|gb|ADQ81447.1| tRNA/rRNA methyltransferase (SpoU) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459778|gb|AFD55462.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
Length = 228
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 8/219 (3%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
++ + L+ +L EER ++ + + S + V+E + + N +A RS +A V V
Sbjct: 14 KIFQYLAQFLTEERLQKINHYAEESSDFILPVMEDVYQYRNAAAIVRSVEACAFHKV--V 71
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
+ + + N V+ GA+ W+++E + ++ RGY+I +A + D
Sbjct: 72 ALEKDNIFDPNLSVTKGADTWVEVEKMPRNKASLEKIKERGYKIVAVSPENNATMLPDYK 131
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
P A+V G E GVSDE L +D +IPM G SFNVSVAA I M+ + +L
Sbjct: 132 VEKPIALVFGTEWEGVSDELLDFADETLAIPMYGFTKSFNVSVAAAICMY----ELKQKL 187
Query: 313 VGCNGD--LTSEEKQILLAEFSLRHSKSAISIVHEYAKR 349
+ D L+S++K +++ +S I H++ +
Sbjct: 188 LNSTIDYKLSSDKKWHTKIRWAVNSIRSGEEIYHKFLRE 226
>gi|428780080|ref|YP_007171866.1| rRNA methylase [Dactylococcopsis salina PCC 8305]
gi|428694359|gb|AFZ50509.1| rRNA methylase [Dactylococcopsis salina PCC 8305]
Length = 236
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRY 200
++ R R +V+ R + +++E + N SA R+ DA+GV + H V + +
Sbjct: 7 VLPRRYHRLRDVLNRRQTDLTVLLEDVHKPHNFSAIIRTCDAVGVFAAHGVYNEGDVPAF 66
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
E + G+EKW+DI N L+++ + + TH+ +A+ +D++ P+ I+
Sbjct: 67 SE---TAKGSEKWVDIHTHPDLETAVNHLKAQNFTLYATHLTENALDYRTIDYTKPSCIL 123
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E GVS EA++L D IPM GMV S NVSVAA +++ A R
Sbjct: 124 FGAEKWGVSTEAMALVDQAIYIPMLGMVQSLNVSVAAAVILFEAQRQR 171
>gi|383790500|ref|YP_005475074.1| rRNA methylase [Spirochaeta africana DSM 8902]
gi|383107034|gb|AFG37367.1| rRNA methylase [Spirochaeta africana DSM 8902]
Length = 235
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 131 SSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH 190
++E+ L ++ R R V+ NR+ + +V+E + N SA R+ DA GVQ VH
Sbjct: 11 TTELCTHLQEFVTPARLSRIKEVLANRTRYLTVVLEDIYQPHNASAVLRTCDATGVQDVH 70
Query: 191 VVSCDSSKRYRENRHVSMGAEKWLDIELW----DAPRECFNVLRSRGYRIATTHVGMDAI 246
++ +S V +G +WL + D LR RGYRI T D +
Sbjct: 71 IIENRNSHTLSPG--VELGTSQWLTRHRYRESADNTAAAVQQLRQRGYRIVATTPHRDDV 128
Query: 247 SVYDMDWS-CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
+ + P A++ G E G+S+ AL L+D IPM G V+S+N+SV+A I++ V
Sbjct: 129 TPEHFNLEKGPAALLFGTEISGLSETALELADEYIRIPMYGFVESYNISVSAAIILTRLV 188
Query: 306 CDRATRLVGCNGD--LTSEEKQILLAEFSLRHSKSAISIVHE 345
RL + D L+ E++ LL ++ LR+S + + E
Sbjct: 189 ----ERLRCSDLDYLLSEHERRSLLLQY-LRNSIKHVDKLEE 225
>gi|354603217|ref|ZP_09021216.1| hypothetical protein HMPREF9450_00131 [Alistipes indistinctus YIT
12060]
gi|353349094|gb|EHB93360.1| hypothetical protein HMPREF9450_00131 [Alistipes indistinctus YIT
12060]
Length = 246
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E LS ++ ER V R+ + + +E N SA R+ +A GVQ +H V
Sbjct: 19 IEYLSGFMTAERYATLCRAVDMRTRYMTVCMENTFHPQNASALVRNCEAFGVQELHAV-- 76
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ R+ N + G +KW++I E LR RGYRI T +D + D +
Sbjct: 77 EELCRFSPNVQIVRGTDKWIEIRKHPTTAELIGSLRGRGYRIVATTPHLDDATPETFDVA 136
Query: 255 C-PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
P A+ G E+ G+SDE + +D IPM GMV+S NVS +A IL++
Sbjct: 137 AGPFALFFGTEHAGISDEVKAGADEFLRIPMCGMVESLNVSASAAILLY 185
>gi|334365949|ref|ZP_08514894.1| RNA methyltransferase, TrmH family [Alistipes sp. HGB5]
gi|390946518|ref|YP_006410278.1| rRNA methylase [Alistipes finegoldii DSM 17242]
gi|313157844|gb|EFR57254.1| RNA methyltransferase, TrmH family [Alistipes sp. HGB5]
gi|390423087|gb|AFL77593.1| rRNA methylase [Alistipes finegoldii DSM 17242]
Length = 227
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
+E + L+ + ER E V R+ + ++ E + N +A R +A GVQ +H
Sbjct: 13 AERIACLAEFTTSERYEVLRRTVAMRTRYMTVLAENMYHGQNAAALIRHCEAFGVQEMHT 72
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
V ++ R+ N + G ++W+D+ + E LRS GYRI T + ++
Sbjct: 73 V--ETLCRFEPNPDIVRGTDQWVDVRRHPSTGEALAALRSAGYRIVATTPHREDVTPETF 130
Query: 252 DWSC-PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
D + P A+V G E+ G+SDE ++ +D IPM GMV+S NVS +A IL++
Sbjct: 131 DVAAGPFALVFGTEHAGISDEVIAGADEFLRIPMCGMVESLNVSASAAILIY 182
>gi|383192242|ref|YP_005202370.1| rRNA methylase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371590500|gb|AEX54230.1| rRNA methylase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 232
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R ++ R + + +E + NVSA R+ADA+GV +H V + R +
Sbjct: 1 MTPERYARIREMLAARQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEIHAVW--PTTRMK 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G+ W+ + ++ ++++G +I T++ A+ +D++ PT I++
Sbjct: 59 TLVSSAAGSNSWVQVRTHKTIQDAVAKMKAKGMQILATNLSEKAVDFRAIDYTRPTCILL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R
Sbjct: 119 GQEKTGITPEALALADSDIIIPMIGMVQSLNVSVASALILYEAQRQR 165
>gi|325282387|ref|YP_004254928.1| tRNA guanosine-2'-O-methyltransferase [Deinococcus proteolyticus
MRP]
gi|324314196|gb|ADY25311.1| tRNA guanosine-2'-O-methyltransferase [Deinococcus proteolyticus
MRP]
Length = 221
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDS----S 197
+ ER + + V++ R ++ ++++ ++ N+SA R+ DA+G + H V S S
Sbjct: 1 MTPERYAKILRVLRLRQPTLSVLMDEVNKPHNLSAILRTCDAVGAMTAHAVPPQSMSLGS 60
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
R R S A KW+ ++ + E L+ +G ++ TH+ ++ + D++ PT
Sbjct: 61 FRSRIFEASSGSAHKWVSVQQHASALEAIRTLQGQGVQVLATHLSQRSVDYREPDYTRPT 120
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
+++G E GVSD A +D IPM GMV S NVSVAA ++ A R +
Sbjct: 121 CVLLGAEKFGVSDVAAEAADANIVIPMMGMVQSLNVSVAAATILFEAQRQRLEAGMYAQP 180
Query: 318 DLTSEE 323
L+ EE
Sbjct: 181 QLSDEE 186
>gi|257146499|emb|CAX30787.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Mocydia crocea]
Length = 239
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Query: 151 VNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA 210
V+ ++ +VCL E + N+SA R+ADA+G+ +H + C +S + + G+
Sbjct: 12 VSAMRQPDLTVCL--ENVHKPHNISAVIRTADAVGIPQIHAIWCKNSSKSLSAA--AAGS 67
Query: 211 EKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSD 270
W+ ++ + ++ G +I H+ AI +D++ PT I++G E G+S
Sbjct: 68 NHWVKVKTHATIENTISTCKAAGMQILAAHLTNQAIDFRQIDYTQPTCIILGQERAGISK 127
Query: 271 EALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILL 328
+AL+L+D IPM GMV S NVSVA+ ++++ A R A L+ EE+Q L
Sbjct: 128 QALALADHNIHIPMMGMVQSLNVSVASALILYEAQRQRQNANMYDSLFSQLSEEEQQAWL 187
Query: 329 AE 330
E
Sbjct: 188 FE 189
>gi|417745748|ref|ZP_12394265.1| spoU rRNA Methylase family protein [Shigella flexneri 2930-71]
gi|332764147|gb|EGJ94384.1| spoU rRNA Methylase family protein [Shigella flexneri 2930-71]
Length = 206
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 173 NVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR 232
NVSA R+ADA+GV VH V S R R + G+ W+ ++ + L+ +
Sbjct: 9 NVSAIIRTADAVGVHEVHAVWPGS--RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQ 66
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G +I TH+ +A+ ++D++ PT I++G E G++ EAL+L+D I M GMV S N
Sbjct: 67 GMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIILMIGMVQSLN 126
Query: 293 VSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
VSVA+ ++++ A R A + N L E+Q LL E ++ + AKRK
Sbjct: 127 VSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFE-------GGYPVLAKVAKRK 179
>gi|123965718|ref|YP_001010799.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9515]
gi|123200084|gb|ABM71692.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9515]
Length = 224
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGV-QSVHVVSCDSSKRY 200
++ R ER NV+ R ++ ++VE ++ N+SA R+ DA GV ++ + D K +
Sbjct: 3 ILPRRFERIKNVLNCRMENLTVLVEAVNKPHNLSAILRTCDAAGVFEANFICKRDEVKTF 62
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
+ G++KW+ + + + L+ +G+++ T + + + D++ T V
Sbjct: 63 NS---TAQGSQKWVKLNNHETTISAVSHLKKKGFKLYGTTLNDSSTDYRNFDYAENTCFV 119
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR-LVGCNGD- 318
+G E G+SDE +S D IPM GMV S NVSVAA IL+ A+ R + L+ NG+
Sbjct: 120 LGAEKWGLSDELISKVDESIFIPMTGMVQSLNVSVAASILLFEAIRQRQIKSLLPLNGEG 179
Query: 319 LTSEEKQILLAEFS 332
L+ +E Q L E+S
Sbjct: 180 LSQKEYQKTLFEWS 193
>gi|221134069|ref|ZP_03560374.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola sp. HTCC2999]
Length = 235
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 88/163 (53%), Gaps = 3/163 (1%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R ER ++ R + +++E + NV+A R+ DA+G+ HVV ++ Y
Sbjct: 5 RFERIKQMLIQRQTDLTVLMEEVHKPHNVAALIRTCDAVGIHEAHVVW---NQNYSLRVG 61
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
S+GA W+ + + L+ +G ++ T++ DA+ ++D++ PTAI++G E
Sbjct: 62 TSLGAHHWVGMHEHSDIEKAIAHLKGQGMQVLVTNLSDDAVDFREVDYTLPTAIILGQEK 121
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G + A++L+D +PM GM S NVSVAA ++++ A R
Sbjct: 122 FGATKNAIALADKEIVVPMVGMTVSLNVSVAAAVILYEAQRQR 164
>gi|149194690|ref|ZP_01871785.1| rRNA methylase SpoU [Caminibacter mediatlanticus TB-2]
gi|149135113|gb|EDM23594.1| rRNA methylase SpoU [Caminibacter mediatlanticus TB-2]
Length = 200
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 90/167 (53%), Gaps = 3/167 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER + ++ R ++ + ++ + N+SA R+ DA+ V ++ K+ + N
Sbjct: 7 ERLNKMKKILNTRQDTLRVFMDYVYSPHNLSAIVRTCDAVNVGKLY---YRHQKKVKLNN 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
++MGA KWL E + + ++ +GY++ T + D I ++D++ PT IV+GNE
Sbjct: 64 EITMGAHKWLFTEYVEDIENFYKNIKEKGYQVVVTLLDKDTIDFREVDYTKPTLIVLGNE 123
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
G S+ ++ +D + IPM GM S NVSVA ++++ A R+ +
Sbjct: 124 VDGASEVSIKYADKKVIIPMYGMSQSLNVSVANAVILYEAQRQRSIK 170
>gi|119357014|ref|YP_911658.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeobacteroides
DSM 266]
gi|119354363|gb|ABL65234.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeobacteroides
DSM 266]
Length = 224
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN----RHVSM 208
++ +R + LV++ ++ N+SA RS DA+G+ +H VS YR+N + +
Sbjct: 1 MLAHRQPDLSLVMDNVNKAHNLSAIIRSCDAVGIHEIHAVS------YRKNIFDRQTAAA 54
Query: 209 GAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGV 268
G +W+++ L + +++ RG +I + +D++ PTA+++G E GV
Sbjct: 55 GTTRWVEVTLHQSITSGLSMIAGRGMQILAASGSSKNVDFRSIDYTRPTALILGAEWDGV 114
Query: 269 SDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
S EAL +D SIPM GM++S NVSVAA +++ A
Sbjct: 115 STEALEAADHHISIPMHGMIESLNVSVAAAVILFEA 150
>gi|365836918|ref|ZP_09378302.1| RNA methyltransferase, TrmH family [Hafnia alvei ATCC 51873]
gi|364563115|gb|EHM40935.1| RNA methyltransferase, TrmH family [Hafnia alvei ATCC 51873]
Length = 219
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH V K R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAVIRTADAVGVHQVHAVW--PGKTMRTMVSTAAGSNSWVSVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L++ G +I T++ A+ ++D++ PT I++G E G++ EAL+L+D
Sbjct: 66 PDISSAVSTLKAEGMQILATNLSSTAVDFREIDYTRPTCILMGQEKYGITAEALALADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A + L+ E++Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQREHSPLSDEDQQRLLWE------- 178
Query: 338 SAISIVHEYAKRKE 351
++ AKRK+
Sbjct: 179 GGYPVLANVAKRKK 192
>gi|256823639|ref|YP_003147602.1| tRNA guanosine-2'-O-methyltransferase [Kangiella koreensis DSM
16069]
gi|256797178|gb|ACV27834.1| tRNA guanosine-2'-O-methyltransferase [Kangiella koreensis DSM
16069]
Length = 231
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R ++ + ++ NR + + ++ + N++A R+ADA+G+ VH V + K H
Sbjct: 8 RLQKILTLLSNRQPDLTVFMDQVHKPHNLAAIVRTADAVGIGHVHAVFPEDVKF--TGHH 65
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
S G+++W+ + ++++G ++ H A+ +D++ PT ++VG+E
Sbjct: 66 TSSGSKRWVTTHKHSNLKSGIAEMKAKGMQVLAAHFSDTAVDFRTIDYTQPTCLLVGSEL 125
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
GVSDEA ++D IPM GMV S NVSVA ++++ A R+
Sbjct: 126 VGVSDEAAEIADQHVIIPMVGMVQSLNVSVATALILYEAQRQRS 169
>gi|303248118|ref|ZP_07334383.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio fructosovorans
JJ]
gi|302490517|gb|EFL50425.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio fructosovorans
JJ]
Length = 196
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R R +V+ R + LV+ + D NVSA RS DA G+ VH++ D++
Sbjct: 5 ITERRAGRIRDVLAKRQTDLTLVINNIHDPHNVSAILRSCDAFGIHRVHLLYTDTAFPAL 64
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S A+KW++ + L+ +G+ + T A + + D + AI++
Sbjct: 65 -GKKSSGSAKKWVETTRHPDAASLASSLKGQGFALVATSFSETARPLQEWDLTGKVAIIL 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC 315
GNE+RGV +E D IPM+GMV S NVSVAA ++++ R GC
Sbjct: 124 GNEHRGVDEELAPYVDGALYIPMQGMVQSLNVSVAAAVILYEGFRQRLA--AGC 175
>gi|317153991|ref|YP_004122039.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio aespoeensis
Aspo-2]
gi|316944242|gb|ADU63293.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio aespoeensis
Aspo-2]
Length = 226
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
++RK+R V+ R + LV++ + D NVSA RS DA GV VH+ +S+
Sbjct: 27 DKRKQRIDQVLARRQKDLTLVMDNIWDPHNVSAVLRSCDAFGVSDVHLYYT-TSQWPDLG 85
Query: 204 RHVSMGAEKWLD-IELWDAPRECFNVLRSRGY-----RIATTHVGMDAISVYDMDWSCPT 257
+ S A KW+ I DA N++ G +I T A V D D++ PT
Sbjct: 86 KKSSGSAMKWIRLIRHVDAATMVGNLVGGGGSAHDGGQILRTGFSATARPVMDFDFTIPT 145
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNG 317
AI++ NE+RG S E +L IPM+GMV S NVSVAA I+++ A R +
Sbjct: 146 AIILSNEHRGTSPELAALVPDEVYIPMQGMVQSLNVSVAAAIILYEAFTQRKRAGLYDAP 205
Query: 318 DLTSEEKQILLAEF 331
+ EE L AE+
Sbjct: 206 SFSDEELAALRAEW 219
>gi|126695780|ref|YP_001090666.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9301]
gi|126542823|gb|ABO17065.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9301]
Length = 223
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R ER +V+ R ++ ++VE ++ N+SA R+ DA GV + +S + +
Sbjct: 3 ILPRRFERIKSVLDCRMKNLTVLVEDVNKPHNLSAILRTCDAAGVFEANFIS--KTNAVK 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + + + L+++G+++ T + +++ + D+S T V+
Sbjct: 61 TFNSTAQGSQKWVKLNNHENTITAISDLKNKGFKLYGTTLNSESVDYRNFDYSQNTCFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR-LVGCNGD-L 319
G E G+S+E S+ D IPM+GMV S NVSVAA IL+ AV R + ++ NG+ L
Sbjct: 121 GAEKWGLSNELKSMVDQSIFIPMRGMVQSLNVSVAASILLFEAVRQRKNKGILPANGEGL 180
Query: 320 TSEEKQILLAEF 331
+E Q L E+
Sbjct: 181 NMDEYQKTLFEW 192
>gi|33860979|ref|NP_892540.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33639711|emb|CAE18881.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 223
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R ER NV+ R ++ ++VE ++ N+SA R+ DA GV + +S + +
Sbjct: 3 ILPRRFERIKNVLNCRMRNLTVLVEAVNKPHNLSAILRTCDAAGVFEANFIS--EKDKVK 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + + + L+ +G+++ T + + + D+S T V+
Sbjct: 61 TFNSTAQGSQKWVKLNNHETTISAVSELKKKGFKLYGTTLNERSTDYRNFDYSENTCFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR-LVGCNGD-L 319
G E G+SD+ +S D IPM GMV S NVSVA IL+ A+ R ++ L+ G+ L
Sbjct: 121 GAEKWGLSDQLISKVDESIFIPMSGMVQSLNVSVATSILLFEAIRQRKSKSLLPLKGEGL 180
Query: 320 TSEEKQILLAEFS 332
++EE + L E+S
Sbjct: 181 SAEEYEKTLFEWS 193
>gi|170728904|ref|YP_001762930.1| tRNA guanosine-2'-O-methyltransferase [Shewanella woodyi ATCC
51908]
gi|169814251|gb|ACA88835.1| tRNA guanosine-2'-O-methyltransferase [Shewanella woodyi ATCC
51908]
Length = 231
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER R ++ NR + L ++ + N++A R+ADA+GV +H V D R N
Sbjct: 4 ERFARINKMLDNRQPDLTLCLDKVHKTNNIAAVIRTADAVGVHQIHAVWPDIEMRVSGN- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+++W+ + R++ ++ T A+ ++D++ PTAI++GNE
Sbjct: 63 -TASGSQQWVKTIKHYHMDDAQQAFRAQNMQVLATTFSETAVDFREIDYTRPTAIILGNE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
GVS E ++ + IPM GMV S NVSVA+ ++M+ A R
Sbjct: 122 RDGVSQEGIAAAGQHIIIPMIGMVQSLNVSVASALVMYEAQRQR 165
>gi|212554698|gb|ACJ27152.1| tRNA (guanosine-2'-O-)-methyltransferase [Shewanella piezotolerans
WP3]
Length = 217
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++ NR + L ++ + N++A R+ADA+G+ +H V + R N + G+++
Sbjct: 1 MLDNRQPDLTLCLDKVHKTNNIAAVIRTADAVGIHEIHAVWPEIEMRVSGN--TASGSQQ 58
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
W+ + + + R + +I T+ A+ ++D++ PTAI++GNE GVS E
Sbjct: 59 WVKSKAHNKMSDAVAEFRRQDMQILATNFSETAVDFREIDYTRPTAIILGNERDGVSPEG 118
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFS 332
++ +D IPM GMV S NVSVA ++M+ A R G G +E+ + F
Sbjct: 119 IASADQHVIIPMIGMVQSLNVSVAGALIMYEA--QRQREAAGMYGTRKLDEQYCQIKLFE 176
Query: 333 LRH 335
H
Sbjct: 177 QGH 179
>gi|218888224|ref|YP_002437545.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218759178|gb|ACL10077.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 187
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
ER V+ R + LV+ + D NVSA +RS DA GV VH+ D++ R S
Sbjct: 2 ERIRRVLGWRQKDLTLVLANIHDPHNVSAIYRSCDAFGVAQVHLYYTDTAFPVL-GRKSS 60
Query: 208 MGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRG 267
A KW+D + L+ G+R+ T A + D D + PTAI++GNE+ G
Sbjct: 61 ASARKWVDTVRHSDAQSLMRTLKEGGHRVLATSCTPAAKPLGDYDMTQPTAIIMGNEHSG 120
Query: 268 VSDEALSLSDLRCSIPMKGMVDSFNVS 294
V+ E + L D IPM GM+ SFNVS
Sbjct: 121 VAPELVELVDGEVYIPMYGMIQSFNVS 147
>gi|372267453|ref|ZP_09503501.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas sp. S89]
Length = 228
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 2/192 (1%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R E+F V++ R + + L+ + + N+SA R+ADA+G+ +H+V N
Sbjct: 5 RYEKFKQVLRQRQHDMTLLTDQVHKGQNISAMLRTADAVGIPEIHMVQPSYGHLLYHN-- 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ G+ ++ ++ L++RG + H AI D++ P A+++G E
Sbjct: 63 TAGGSGRFTGNAVYPDIESGMVELKNRGMHLYAAHWSDRAIDFRAADYTKPFALIMGAEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQ 325
G+SD A +D +IP+ GMV+S+NVSVAA I++ A+ R + + L E+
Sbjct: 123 HGLSDYAAEHADDHVTIPIIGMVESYNVSVAAAIILQEAMHQRQKAGMYDDKVLDEEDPA 182
Query: 326 ILLAEFSLRHSK 337
I F H K
Sbjct: 183 IKDILFRWMHPK 194
>gi|224534903|ref|ZP_03675472.1| tRNA/rRNA methyltransferase [Borrelia spielmanii A14S]
gi|224513843|gb|EEF84168.1| tRNA/rRNA methyltransferase [Borrelia spielmanii A14S]
Length = 218
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
++ LS ++ + +K R V+ R+ + V+E + N SAT R+ + LG+ VH++
Sbjct: 9 IDVLSEFITDGKKARIEEVLSRRTNYLTFVLEDIFQPHNASATIRTGEILGLSDVHII-- 66
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ + + N +++G+ +W+++ + + + L+S GY I T + ++++ + +
Sbjct: 67 EKNNKCTLNPDITLGSSQWINLNKYKNTKLAIDRLKSNGYIIVATSLNEQSVNLENFPIN 126
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
A+ G E G+S E L +DL IPM G S+N+SVA I+++
Sbjct: 127 NKMAVFFGTELTGLSAEVLGAADLCVKIPMYGFTQSYNISVAVAIVIY 174
>gi|312131975|ref|YP_003999315.1| RNA methyltransferase, trmh family, group 3 [Leadbetterella
byssophila DSM 17132]
gi|311908521|gb|ADQ18962.1| RNA methyltransferase, TrmH family, group 3 [Leadbetterella
byssophila DSM 17132]
Length = 263
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ L+++ ++D N A RSA+ GV +V V + S++ + S GA ++ +
Sbjct: 113 LVLILDRITDVRNFGAICRSAECSGVHAVVVPARGSAQINGDAMKTSSGALNFIPVCRET 172
Query: 221 APRECFNVLRSRGYRIAT-THVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
L++ G++I + T G D VYD D+S PTAI++G+E G+SD + LSD +
Sbjct: 173 DLINTVKYLKNSGFQIISCTEKGNDL--VYDADYSLPTAIIMGSEEDGISDALIDLSDFK 230
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAV 305
IP+KG V+S NVSVAAG+++ AV
Sbjct: 231 AQIPLKGKVESLNVSVAAGVILFEAV 256
>gi|328868520|gb|EGG16898.1| hypothetical protein DFA_07879 [Dictyostelium fasciculatum]
Length = 382
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 123/281 (43%), Gaps = 62/281 (22%)
Query: 108 ESLSNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEG 167
E + +K+ ++ +K + + + L P +R E F V+ +R+ +V E
Sbjct: 58 EIIIHKQLIETIETFKDQSIQSFYKRLHDILIPITSTQRIETFKRVINDRTDRFVVVCED 117
Query: 168 LSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFN 227
L + GN++A RS DA+G+Q +H+V + R+ +S G+EKW+ I EC
Sbjct: 118 LGNPGNIAAVVRSCDAMGIQHMHIV--EKRIRFDSFGAISKGSEKWVTIHRHADTLECVQ 175
Query: 228 VLRSRGYRIATTHVGMDAI----------------------------------------- 246
LR GY+I ++ + + A
Sbjct: 176 NLRDNGYKIWSSDLSLGAFPFDKLVFQPNQNIIPPQLDPFYNHLKNQNNQNNQNNQNQNN 235
Query: 247 ---SVYDMDWSCPTAIVVGNE---------NRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
++Y +++ NE + GVSDE SLSD R +PM G+V+SFNVS
Sbjct: 236 IFDNIYKEYSKDKDNVILNNEKIAIVFGNEHNGVSDEMKSLSDRRIFLPMSGLVESFNVS 295
Query: 295 VAAGILMHHAVCDRATRLVGC-NGDLTSEEKQILLAEFSLR 334
V+ G+L+ + ++ G G+LT+ EK L A + ++
Sbjct: 296 VSVGMLLAYL------KIQGVLAGNLTALEKDRLFALWCMK 330
>gi|410463459|ref|ZP_11316973.1| rRNA methylase [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983423|gb|EKO39798.1| rRNA methylase [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 196
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R R V+ R + LV+ + D NVSA RS DA G+ VH++ D++
Sbjct: 5 ITERRVRRIEEVLARRQTDLTLVINNIHDPHNVSAILRSCDAFGIHRVHLLYTDTAFPAL 64
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S A+KW++ L+ +G+R+ T A+ + D + TAI++
Sbjct: 65 -GKKSSGSAKKWVETVRHKDAASLAATLKGQGFRLVATSFTETAVPLQKWDLTTKTAIIL 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
GNE+ GV ++ D IPM GMV S NVSVAA ++++
Sbjct: 124 GNEHSGVDEDLAPHVDGALYIPMMGMVQSLNVSVAAAVILY 164
>gi|386392791|ref|ZP_10077572.1| rRNA methylase [Desulfovibrio sp. U5L]
gi|385733669|gb|EIG53867.1| rRNA methylase [Desulfovibrio sp. U5L]
Length = 196
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R R +V+ R + LV+ + D NVSA RS DA G+ VH++ D++
Sbjct: 5 ITERRVSRIRDVLSRRQTDLTLVINNIHDPHNVSAILRSCDAFGIHRVHLLYTDTAFPAL 64
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S A+KW++ L+ +GY + T A + D D + AI++
Sbjct: 65 -GKKSSGSAKKWVETIRHPDAAGLAATLKGQGYALVATLCNETARPLQDWDLTGKVAIIL 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
GNE+RGV ++ D IPM+GMV S NVSVAA ++++ R
Sbjct: 124 GNEHRGVDEDLAPHVDGGLYIPMQGMVQSLNVSVAAAVILYEGFRQR 170
>gi|78778803|ref|YP_396915.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9312]
gi|78712302|gb|ABB49479.1| tRNA (guanosine-2'-O-)-methyltransferase [Prochlorococcus marinus
str. MIT 9312]
Length = 223
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
++ R ER +V+ R ++ ++VE ++ N+SA R+ DA GV + +S + +
Sbjct: 3 ILPRRFERIKSVLDCRMQNLTVLVEDVNKPHNLSAILRTCDAAGVFEANFIS--KTNAVK 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + + + L+++G+++ T + +++ + D+S T V+
Sbjct: 61 TFNSTAQGSQKWVKLNNHENTITAISDLKNKGFKLYGTTLNSESVDYRNFDYSQNTCFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
G E G+S E +S+ D IPM+GMV S NVSVAA IL+ A+ R +
Sbjct: 121 GAEKWGLSKEIISMVDQSIFIPMRGMVQSLNVSVAASILLFEAIRQRKNK 170
>gi|239907184|ref|YP_002953925.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio magneticus
RS-1]
gi|239797050|dbj|BAH76039.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio magneticus
RS-1]
Length = 196
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R R V+ R + LV+ + D NVSA RS DA G+ VH++ D++
Sbjct: 5 ITERRVRRIEEVLSRRQTDLTLVINNIHDPHNVSAILRSCDAFGIHRVHLLYTDTAFPAL 64
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S A+KW++ L+ +G+R+ T A+ + D + TAI++
Sbjct: 65 -GKKSSGSAKKWVETVRHKDAASLAAALKGQGFRLVATSFTETAVPLQKWDLTTKTAIIL 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
GNE+ GV ++ D IPM GMV S NVSVAA ++++
Sbjct: 124 GNEHSGVDEDLAPHVDGALYIPMMGMVQSLNVSVAAAVILY 164
>gi|162448639|ref|YP_001611006.1| tRNA (guanosine-2'-O-)-methyltransferase [Sorangium cellulosum So
ce56]
gi|161159221|emb|CAN90526.1| tRNA (guanosine-2'-O-)-methyltransferase [Sorangium cellulosum So
ce56]
Length = 508
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
L ++V L ++ ER+ R V+ R +V + ++ D N +A RS DA G+Q
Sbjct: 25 LDVADVARILEEFVTNERRARLRGVIAARLDAVTVAMDAPHDPHNGAAVLRSCDAFGLQR 84
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
+H++ + ++++ + VS G+E+W+D+ + LR+ G+ + TH + ++
Sbjct: 85 LHII--ERAEQFLVSNTVSRGSERWVDVRTHASTEAAVAELRASGHELVATHPEGE-LTP 141
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D+ A+V+GNE G+ + + +PM+G +S NVSV A IL+ HA R
Sbjct: 142 RDLSSIPRLALVLGNERDGIRPDLAAACARAVRVPMRGFAESLNVSVTAAILLEHATNGR 201
Query: 309 ATRLVGCNGDLTSEEKQILL 328
GDL E QI L
Sbjct: 202 P-------GDL-PEPYQITL 213
>gi|261414776|ref|YP_003248459.1| tRNA/rRNA methyltransferase SpoU [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371232|gb|ACX73977.1| tRNA/rRNA methyltransferase (SpoU) [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 250
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
YL +E +R V + ++V L NV + RS D G++ VH+ S +
Sbjct: 84 YLEQEPGDR--EVANEKPIQFAVLVHNLRSAFNVGSIIRSTDCFGLEGVHLSGYSCSPDH 141
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
+ + G ++W+ I+ WD+P +C + GY I G D S+ ++ W IV
Sbjct: 142 VTVKSAARGCQEWIPIKRWDSPFDCIKWHKENGYEIIALETGEDIPSINNVKWPEKGLIV 201
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
+GNE G++ E ++ + ++ +IPM G S NV+ A I+ A C R+
Sbjct: 202 LGNEELGIAPEIMAEATMKVTIPMAGRKASMNVAGAFAIM---AFCLRS 247
>gi|385789752|ref|YP_005820875.1| TrmH family RNA methyltransferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326903|gb|ADL26104.1| RNA methyltransferase, TrmH family [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 241
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
YL +E +R V + ++V L NV + RS D G++ VH+ S +
Sbjct: 75 YLEQEPGDR--EVANEKPIQFAVLVHNLRSAFNVGSIIRSTDCFGLEGVHLSGYSCSPDH 132
Query: 201 RENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
+ + G ++W+ I+ WD+P +C + GY I G D S+ ++ W IV
Sbjct: 133 VTVKSAARGCQEWIPIKRWDSPFDCIKWHKENGYEIIALETGEDIPSINNVKWPEKGLIV 192
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
+GNE G++ E ++ + ++ +IPM G S NV+ A I+ A C R+
Sbjct: 193 LGNEELGIAPEIMAEATMKVTIPMAGRKASMNVAGAFAIM---AFCLRS 238
>gi|357632632|ref|ZP_09130510.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio sp. FW1012B]
gi|357581186|gb|EHJ46519.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio sp. FW1012B]
Length = 196
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ E R R +V+ R + LV+ + D NVSA RS DA G+ VH++ D++
Sbjct: 5 ITERRVGRIRDVLSRRQTDLTLVINNIHDPHNVSAILRSCDAFGIHRVHLLYTDTAFPAL 64
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S A+KW++ L+ +GY + T A + D D + AI++
Sbjct: 65 -GKKSSGSAKKWVETIRHPDAASLAASLKGQGYTLVATLCSETARPLQDWDLTGKVAIIL 123
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
GNE+RGV ++ D IPM+GMV S NVSVAA ++++ R
Sbjct: 124 GNEHRGVDEDLAPHVDGALYIPMQGMVQSLNVSVAAAVILYEGFRQR 170
>gi|372223049|ref|ZP_09501470.1| TrmH family RNA methyltransferase [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 245
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Query: 152 NVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE 211
+++ + + L+++ L+D N A R+A+ +GV ++ V S+ + S GA
Sbjct: 88 QILEAKESPLILLLDQLTDVRNFGAIIRTAECVGVDAIVVPKSGSAPITSDTVKTSAGAA 147
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
+ I D ++ L++ G+++ D S+YD+D++ TAI++G E++G+SD
Sbjct: 148 FTVPIAKADHLKDVIYYLQASGFKLVAATEKTDH-SIYDVDFTGATAIIMGAEDKGISDS 206
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
L L+D + +P+ G ++S NVSVA G+ ++ A+ R
Sbjct: 207 ILKLADHKAKLPLMGQIESLNVSVACGVFLYEALRQR 243
>gi|226357312|ref|YP_002787052.1| tRNA guanosine-2-O-methyltransferase [Deinococcus deserti VCD115]
gi|226319302|gb|ACO47298.1| putative tRNA guanosine-2-O-methyltransferase (transfer
ribonucleate guanosine 2-methyltransferase) [Deinococcus
deserti VCD115]
Length = 222
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 4/168 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER + + V+++R ++ ++++ ++ N+SA R+ DA+GV H V +
Sbjct: 5 ERYAKILRVLRHRQPTLTVLMDEVNKPHNLSAIIRTCDAVGVLEAHAVPPKGGPLASFSG 64
Query: 205 HV----SMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
H S A KW+ + + L+ +G+++ TH+ ++ + D++ PT ++
Sbjct: 65 HTYEATSGSAHKWVPVHSHTDAVSAVHALQGQGFQVLATHLSQRSVDYREPDYTRPTCVL 124
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+G E GVSDEA +D IPM GMV S NVSVAA ++ A R
Sbjct: 125 LGAEKWGVSDEAADAADHNIVIPMFGMVQSLNVSVAAATILFEAQRQR 172
>gi|365847299|ref|ZP_09387788.1| RNA methyltransferase, TrmH family [Yokenella regensburgei ATCC
43003]
gi|364572553|gb|EHM50093.1| RNA methyltransferase, TrmH family [Yokenella regensburgei ATCC
43003]
Length = 218
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+VC+ E + NVSA R+ADA+GV VH + R R + G+ W+ ++
Sbjct: 10 TVCM--EQVHKPHNVSAIIRTADAVGVHEVHAIW--PGNRMRTMASSAAGSNSWVSVKTH 65
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ G ++ TH+ A+ ++D++ PT I++G E G++ EAL L+D
Sbjct: 66 RNIGDAVTHLKGCGMQVLATHLSDTAVDFREIDYTRPTCILMGQEKTGITQEALDLADQD 125
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQILLAEFSLRHSK 337
IPM GMV S NVSVA+ ++++ A R A N L E+Q LL E
Sbjct: 126 IIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRENSMLPEAEQQRLLFE------- 178
Query: 338 SAISIVHEYAKRK 350
++ AKRK
Sbjct: 179 GGYPVLANVAKRK 191
>gi|257146503|emb|CAX30790.1| tRNA (Guanosine-2'-O-)-methyltransferase [SBR proteobacterium]
Length = 239
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R V+ R + + +E + N+SA R+ADA+G+ +H + C +S +
Sbjct: 4 KRYARIRQVIAMRQPDLTVCLENVHKPHNISAVIRTADAVGIPQIHAIWCKNSSKSLSA- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ I+ + ++ G +I ++ AI +D++ PT I++G E
Sbjct: 63 -AAAGSNHWVKIKTHATIENAISTCKAVGMQILAAYLNNQAIDFRQIDYTQPTCIILGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
+S +AL+L+D IPM GMV S NVSVA+ ++++ A R A+ L E
Sbjct: 122 RASISKQALALADHNIHIPMMGMVQSLNVSVASALILYEAQRQRQDASMYDSLFSQLPEE 181
Query: 323 EKQILLAE 330
E+Q L E
Sbjct: 182 EQQEWLFE 189
>gi|392404290|ref|YP_006440902.1| tRNA/rRNA methyltransferase (SpoU) [Turneriella parva DSM 21527]
gi|390612244|gb|AFM13396.1| tRNA/rRNA methyltransferase (SpoU) [Turneriella parva DSM 21527]
Length = 220
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 37/218 (16%)
Query: 141 YLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRY 200
+L E+R+ER + NR+ + +++E + D N SA R+AD LG+Q +H+
Sbjct: 10 FLTEKRRERLQAALANRTRRLTVLLEDIYDPLNASAVLRTADGLGIQDIHIA-------- 61
Query: 201 RENRH-------VSMGAEKWLDIELW-------------------DAPRECFNVLRSRGY 234
ENRH V+ A WL I+ + + F L+ GY
Sbjct: 62 -ENRHAFNAHAKVAGRAASWLTIKKYRENFANTKVDFRIKPEGVQHSTAAAFAALKKDGY 120
Query: 235 RIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
+ T + + ++D + AIV+G+E+ G+SD A+ +D ++PM G +S+N+S
Sbjct: 121 TVLATSPRGRSTPLRELDITKKYAIVLGSEHWGLSDWAIENADAAIALPMLGFTESYNIS 180
Query: 295 VAAGILMHHAVCDRATRLVGCNGDLTSEEKQILLAEFS 332
V A +++ + + DR R + L+ EEK+ L ++++
Sbjct: 181 VTAAMILFY-LSDR-LRSETVDWGLSEEEKEQLWSDWT 216
>gi|319957044|ref|YP_004168307.1| tRNA guanosine-2'-o-methyltransferase [Nitratifractor salsuginis
DSM 16511]
gi|319419448|gb|ADV46558.1| tRNA guanosine-2'-O-methyltransferase [Nitratifractor salsuginis
DSM 16511]
Length = 217
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L+ + ER R ++ + + + ++ + D N+SA R+ADA+GV + + +
Sbjct: 3 ERLTRLVTPERLARIEALLAAKQPCLQIFLDDVHDSRNMSAVIRTADAVGVLDI-FYARN 61
Query: 196 SSKRYRENRHVSMGAEKWLDIEL--WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ + + V+ GA +WL ++ E R G +I TH+ ++ D+D+
Sbjct: 62 NPQHVPVHTLVTQGAHRWLRRHRIPYEERAEFLRKKREEGMQIVVTHLEEASLDFRDVDY 121
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLV 313
+ PT +V+GNE GVS E L+ + IPM GMV S N+SVAA ++++ A R
Sbjct: 122 TRPTMLVLGNEREGVSPEVLAEASHSVIIPMHGMVQSLNISVAAALILYEAERQRKAAGY 181
Query: 314 GCNGDLTSEEKQILLAEF-----SLRHSKSAISIV 343
+ E++ LL E+ +R SK + ++
Sbjct: 182 YEEARMPEPERRALLEEWLRRDTLVRRSKGRVRVI 216
>gi|347543092|ref|YP_004857730.1| RNA methyltransferase [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346986129|dbj|BAK81804.1| RNA methyltransferase [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 246
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 150 FVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV---SCDSSKRYRENRHV 206
+N V N S + L+++ + D N+ + R+A+ +G++++ + SCD + +
Sbjct: 86 IINNVDNESDEIVLILDSIQDPRNLGSILRTAEIMGIKNIIIPQKRSCDVNNTVWK---T 142
Query: 207 SMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENR 266
SMGA L+I + + G++I T + I++ D+++ P +++GNE
Sbjct: 143 SMGAVAHLNICRANNIPNVILKFKDIGFKIIATSLNT-KINLSDINYKYPIVLIIGNEET 201
Query: 267 GVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
GV E L+ D++ IPM G +DSFNVSVAAGI+M+
Sbjct: 202 GVDKELLTFCDVKVKIPMYGKIDSFNVSVAAGIIMYE 238
>gi|298530210|ref|ZP_07017612.1| tRNA guanosine-2'-O-methyltransferase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509584|gb|EFI33488.1| tRNA guanosine-2'-O-methyltransferase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 197
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRE- 202
+ RK R +V+ R + LV+ + D NVSA RS DA V VH++ + + E
Sbjct: 8 DRRKLRIKDVLCRRQRDLTLVMNNIHDPHNVSAILRSCDAFAVPDVHLLYV--GQPFPEV 65
Query: 203 NRHVSMGAEKWLD-IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R S A KW+ I DA E L +G + T G +IS+ + D++ PTA+++
Sbjct: 66 GRKSSASARKWVRRIRHRDAG-EMVQRLEGQGLCLIRTGFGPQSISLPEWDFTRPTAVIL 124
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
GNE+ GV ++ + IPM+GMV S NVSVAA ++++ A R
Sbjct: 125 GNEHSGVQEDLEQMVAQEIYIPMQGMVQSLNVSVAAAVILYEAFRQR 171
>gi|257146522|emb|CAX30805.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Pentastiridius sp.]
Length = 239
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R R V+ R + + +E + N+SA R+ADA+G+ +H + C +S +
Sbjct: 4 KRYARIRQVIAMRQPDLTVCLENVHKPHNISAVIRTADAVGIPQIHAIWCKNSSKSLSA- 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ G+ W+ ++ + ++ G +I ++ AI +D++ PT I++G E
Sbjct: 63 -AAAGSNHWVKVKTHATIENAISTCKAVGMQILAAYLNNQAIDFRQIDYTQPTCIILGQE 121
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSE 322
+S +AL+L+D IPM GMV S NVSVA+ ++++ A R A+ L E
Sbjct: 122 RASISKQALTLADHNIHIPMMGMVQSLNVSVASALILYEAQRQRQDASMYDSLFSQLPEE 181
Query: 323 EKQILLAE 330
E+Q L E
Sbjct: 182 EQQEWLFE 189
>gi|406899812|gb|EKD42986.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 153
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
L++ + NV A FR+AD GV +++ + VS+GAEKW+ E
Sbjct: 7 LILPNIRSAHNVGAMFRTADGAGVDKIYLTGYTPCPPHPRLDKVSLGAEKWVPWEYAKQT 66
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
L+ +GY+I ++++Y+ P A+VVGNE GV+ L D +
Sbjct: 67 GRLLKKLKEQGYKIVALEQTSKSVNIYEWVPEFPLALVVGNEKTGVTKSLLKYCDTEIEL 126
Query: 283 PMKGMVDSFNVSVAAGILMHH 303
MKG S NVSVAAGI M++
Sbjct: 127 DMKGKKKSLNVSVAAGITMYY 147
>gi|406885870|gb|EKD32983.1| SpoU rRNA methylase family protein [uncultured bacterium]
Length = 161
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 151 VNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA 210
+N N + ++ + NV + FRS++ GV+ +++ + RE V++GA
Sbjct: 1 MNKTANDEMRLVVLAHNIRSMHNVGSIFRSSECFGVEKIYLTGYTACPPRREINKVALGA 60
Query: 211 EKWLDIELWDAPRECFNV---LRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRG 267
E DI W+ +E + L+ GY I D++S+ D +S A+++GNE G
Sbjct: 61 E---DIVRWEYSQEMLPLILELKKSGYEIVALETTKDSVSISDAAFSGRVALILGNEVNG 117
Query: 268 VSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVC 306
+ + L+LSD I MKG S NVSVAAGI M+ +C
Sbjct: 118 IETDILALSDKVAHIEMKGKKSSLNVSVAAGIAMYALLC 156
>gi|145219814|ref|YP_001130523.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeovibrioides
DSM 265]
gi|145205978|gb|ABP37021.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeovibrioides
DSM 265]
Length = 232
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 5/167 (2%)
Query: 148 ERFVNVVK---NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ERF+ + K +R + +V++ ++ N+SA RS DA+G+ ++ VS S K +
Sbjct: 5 ERFLRIKKMLASRQPDLTVVMDNVNKPHNLSAIIRSCDAVGIHDLYAVS--SKKSIHTTQ 62
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ + GA +W ++ L L G ++ ++ +D++ PTAIV+G E
Sbjct: 63 NAAAGAGRWTNLHLRKDIGTLCRKLGMEGMQVLAATNTEESRDFRTIDFTLPTAIVLGAE 122
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
GVS EA+ +D+ +IPM GMV+S NVSVAA +++ A R+ +
Sbjct: 123 WEGVSAEAIQAADMAITIPMYGMVESLNVSVAAALILFEAERQRSLK 169
>gi|340618472|ref|YP_004736925.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Zobellia
galactanivorans]
gi|339733269|emb|CAZ96646.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Zobellia
galactanivorans]
Length = 248
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV +SP E +E V+ + + L+++ LSD N A R+A+ GV + +
Sbjct: 70 VVANISPITFYELEELVEKVIAKKEAPLFLLLDQLSDVRNFGAIIRTAECTGVDGIIIQK 129
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
++ + S GA + I D ++ L++ G + D S+YD+ +
Sbjct: 130 KGAAPVTADTIKTSAGAAFKVPIAKVDHIKDAVYYLQASGISVVAATEKTDT-SIYDISF 188
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
S P+AIV+G+E+RG+S L +D +P+ G ++S NVSVA + ++ AV RA
Sbjct: 189 SGPSAIVMGSEDRGISPSTLKAADHLAKLPLLGEIESLNVSVACAVFLYEAVRQRA 244
>gi|294815551|ref|ZP_06774194.1| rRNA methylase [Streptomyces clavuligerus ATCC 27064]
gi|326443902|ref|ZP_08218636.1| putative tRNA/rRNA methyltransferase [Streptomyces clavuligerus
ATCC 27064]
gi|294328150|gb|EFG09793.1| rRNA methylase [Streptomyces clavuligerus ATCC 27064]
Length = 179
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%)
Query: 155 KNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWL 214
+ S V L++E + NV + R+A ALGV +++ +S R + + + MG +++L
Sbjct: 18 RQSSAEVALLLENVQSPFNVGSIVRTAAALGVGRLYLAGNTASPRNAKAQKICMGTDRYL 77
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALS 274
D++ ++ E +R+ GYR+ + +A+ +++ D S T I VGNE+ G+S +AL
Sbjct: 78 DVQTFETLPEAVERVRADGYRLVGLELADEAVPLHEADLSGATCIAVGNEDHGISPQALG 137
Query: 275 LSDLRCSIPMKGMVDSFNVSVAAGI 299
+ D IP G V S NV+ A +
Sbjct: 138 MCDAVAFIPQLGRVGSLNVATALAV 162
>gi|260223702|emb|CAX28485.1| tRNA (Guanosine-2'-O-)-methyltransferase [Candidatus Phlomobacter
fragariae]
Length = 218
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 10/180 (5%)
Query: 149 RFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV-SCDSSKRYRENRHVS 207
R V +++ +VCL E L N+SA R+AD + + +H + S +SSK +
Sbjct: 10 RQVIAMRHPDLTVCL--ENLHKPRNISAIIRTADEVEIPQIHAIWSKNSSKNLST---AA 64
Query: 208 MGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRG 267
G+ W+ ++ + ++ G +I TH+ AI ++D++ P I++G E G
Sbjct: 65 AGSNHWVRVKNHATIENTISTCKAAGMQILVTHLTNQAIDFLEIDYTQPNCIILGQEQTG 124
Query: 268 VSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCNGDLTSEEKQ 325
+S +AL+L+D +IPM GMV S NVSVA+ ++++ A R A L+ EE+Q
Sbjct: 125 ISKQALALAD--HNIPMMGMVQSLNVSVASALILYEAQRQRQNANMYDSLFSQLSEEEQQ 182
>gi|320332674|ref|YP_004169385.1| tRNA guanosine-2'-O-methyltransferase [Deinococcus maricopensis DSM
21211]
gi|319753963|gb|ADV65720.1| tRNA guanosine-2'-O-methyltransferase [Deinococcus maricopensis DSM
21211]
Length = 217
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 3/168 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER E+ V+ R ++ +++E ++ N SA RS DA+GV H V + K
Sbjct: 1 MTPERFEKLKRVLSQRQPTLTVLMEEVNKPHNFSAILRSCDAVGVWEAHAVPPKNGKLPT 60
Query: 202 ENRHVSMGAEKWLDIE-LWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
N S AEKW+ ++ DAP L+ RG+++ TH+ ++ ++D++ PT ++
Sbjct: 61 YN-ATSGSAEKWVRVQSHADAP-SAVRELQGRGFQVLATHLSARSVDYRELDYTRPTCVL 118
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+G E GVS+EA +D IPM GMV S NVSVA ++ A R
Sbjct: 119 LGAEKWGVSEEAADAADANVVIPMLGMVQSLNVSVACATILFEAQRQR 166
>gi|254391080|ref|ZP_05006288.1| tRNA/rRNA methyltransferase [Streptomyces clavuligerus ATCC 27064]
gi|197704775|gb|EDY50587.1| tRNA/rRNA methyltransferase [Streptomyces clavuligerus ATCC 27064]
Length = 182
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%)
Query: 155 KNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWL 214
+ S V L++E + NV + R+A ALGV +++ +S R + + + MG +++L
Sbjct: 21 RQSSAEVALLLENVQSPFNVGSIVRTAAALGVGRLYLAGNTASPRNAKAQKICMGTDRYL 80
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALS 274
D++ ++ E +R+ GYR+ + +A+ +++ D S T I VGNE+ G+S +AL
Sbjct: 81 DVQTFETLPEAVERVRADGYRLVGLELADEAVPLHEADLSGATCIAVGNEDHGISPQALG 140
Query: 275 LSDLRCSIPMKGMVDSFNVSVAAGI 299
+ D IP G V S NV+ A +
Sbjct: 141 MCDAVAFIPQLGRVGSLNVATALAV 165
>gi|291514391|emb|CBK63601.1| rRNA methylases [Alistipes shahii WAL 8301]
Length = 243
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 7/216 (3%)
Query: 131 SSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH 190
++E + L+ ++ ER V R+ + ++ E + N +A R +A GVQ +H
Sbjct: 25 AAERIACLAGFMTPERYAVLRKTVSMRTRYMTVLAENMYHGQNAAALIRHCEAFGVQEMH 84
Query: 191 VVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAI-SV 248
V ++ + N ++ G +W+D+ + E L+ GYRI ATT DA
Sbjct: 85 TV--ETLCPFEPNPDIARGTHQWVDVRRHASTGEAVAALKGAGYRIVATTPHREDATPET 142
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+D+ P A+V G E+ G+SDE ++ +D IPM GMV+S NVS +A IL++
Sbjct: 143 FDVGRG-PFALVFGTEHAGISDEVIASADEFLRIPMCGMVESLNVSASAAILIY--TLSE 199
Query: 309 ATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVH 344
RL N ++ E+ L + R K + +I+
Sbjct: 200 RMRLTVGNWRMSDAEQAETLCRWMRRSVKDSEAILQ 235
>gi|427723345|ref|YP_007070622.1| tRNA guanosine-2'-O-methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427355065|gb|AFY37788.1| tRNA guanosine-2'-O-methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 220
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 7/171 (4%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVH----VVSCDSS 197
++ R +R + R + ++ E + N+SA R+ DA+GV VH VV +
Sbjct: 1 MLPRRYQRIRETLDRRQPDLTVLTEDVHKPHNLSAIIRTCDAVGVFEVHAMNKVVDGEDL 60
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
+ + V+ G+EKW+++ L++R ++I H+ A+ ++D++ PT
Sbjct: 61 PTFTQ---VAQGSEKWVELHRHTTIEGAIAQLQARDFKIYAAHLSDRAVDYREIDYTQPT 117
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
A+++G E GVS+ D IPM GMV S NVSVAA +++ A R
Sbjct: 118 AVLMGAERWGVSESTADAVDGHIIIPMLGMVQSLNVSVAAAVVLFEAQRQR 168
>gi|449017128|dbj|BAM80530.1| similar to rRNA methylase SpoU [Cyanidioschyzon merolae strain 10D]
Length = 309
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
++ L L +R R V+ R V L++E L+D N +A R+ + G+Q VHV+
Sbjct: 84 LDLLRGRLRPKRVARMEQVLLQRCERVTLLLENLADPHNGAAILRTCECFGIQFVHVLES 143
Query: 195 DSSKRYREN---------RHVSMGAEKWLDIELWDAPRECFNVLRSRGYR-IATTHVGMD 244
S R + R VS ++WL I + EC LR+ GY I TT
Sbjct: 144 IESFRCHSHTVPDDCGSTRGVSRSCDQWLRIRRFHQLNECLASLRANGYSLIGTTLDTTR 203
Query: 245 AISVYDMDWSC--PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
++ + ++D++ IV+GNE RG+S + +PM G S NVSVAA +++
Sbjct: 204 SVPIDNVDFTSLKRICIVLGNEERGLSSAMQRHCEQLIHLPMVGFSQSLNVSVAAACMLY 263
Query: 303 HAVCDRATRLVGC-NGDLTSEEKQILLAEFSLRHSKS 338
H R+ GC DL+ E+ Q L + +R +++
Sbjct: 264 H------LRMKGCIQPDLSPEQLQDLYTRWLVRANRN 294
>gi|297624314|ref|YP_003705748.1| tRNA guanosine-2'-O-methyltransferase [Truepera radiovictrix DSM
17093]
gi|297165494|gb|ADI15205.1| tRNA guanosine-2'-O-methyltransferase [Truepera radiovictrix DSM
17093]
Length = 221
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS-KRYRE 202
+ER ++ + V+K R + ++ E + N+SA R+ DA+G+ VH ++ + E
Sbjct: 4 KERYDKILRVLKKRQRDLSVLAENVHKPHNLSAMLRTCDAVGIGVVHALNPTGGVPTFNE 63
Query: 203 NRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVG 262
S A KW+++ + + E L G ++ H A+ ++D++ PT ++ G
Sbjct: 64 T---SASAHKWVELRVHGSLAEARAALG--GVQLLAAHFSGRALDYREVDYTRPTCVLFG 118
Query: 263 NENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
NE GVS EA +D IPM GMV S NVSVAA +++ A R
Sbjct: 119 NEKHGVSREAADAADAHIVIPMLGMVQSLNVSVAAAVILFEAQRQR 164
>gi|33239873|ref|NP_874815.1| tRNA/rRNA methyltransferase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33237399|gb|AAP99467.1| rRNA methylase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 229
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
L+ R +R +V+ R ++ ++ E + N+SA R+ DA+G+ H V S +
Sbjct: 3 LLPRRFDRIKSVLNRRMSNLTVLAEEVEKPHNLSAILRTCDAIGILQAHAVFKQS--KIP 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ G++KW+ + L+ G++I T++ A D+ PTA V+
Sbjct: 61 TFNSTAQGSQKWVKLVKHPNIEVAIKSLKGEGFKIYGTNLNEQAKDYRLFDYKGPTAFVL 120
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E G+S A SL D IPM+GMV S NVSVA+ L+ A+ R
Sbjct: 121 GAEKWGLSQLATSLVDESIFIPMRGMVQSLNVSVASATLLFEALRQR 167
>gi|255036422|ref|YP_003087043.1| TrmH family RNA methyltransferase [Dyadobacter fermentans DSM
18053]
gi|254949178|gb|ACT93878.1| RNA methyltransferase, TrmH family, group 3 [Dyadobacter fermentans
DSM 18053]
Length = 256
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Query: 103 GVGSMESLSNKRWFPY--LDRYKCGDVYLSSSE-VVEALSPYLMEERKERFVNVVKNRSY 159
G+ +E L+ + PY + K V + + V+ +SP V ++
Sbjct: 47 GLAEIEKLAKELGVPYQRVPVEKLNRVTRKNHQGVIAFVSPIQYMPLHNVLTQVYEDGKT 106
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+ L+++ ++D N A R+A+ GVQ++ V + ++ + S GA +L I
Sbjct: 107 PLLLLLDRVTDVRNFGAIARTAECAGVQAIIVPTKGGAQINADAMKTSSGALNFLPICRE 166
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
E LR+ G +I D S+YD+D++ PT I++G+E G+S E + L+D
Sbjct: 167 PNLYETLTYLRNSGLQIIACTEKTDK-SLYDIDFTVPTVIIMGSEEDGISKEFIDLADSG 225
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
IP+ G V+S NVSVA+ ++++ AV R
Sbjct: 226 ARIPLAGQVESLNVSVASSVVLYEAVRQR 254
>gi|94986333|ref|YP_605697.1| tRNA (guanosine-2'-O-)-methyltransferase [Deinococcus geothermalis
DSM 11300]
gi|94556614|gb|ABF46528.1| tRNA (guanosine-2'-O-)-methyltransferase [Deinococcus geothermalis
DSM 11300]
Length = 216
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER ++ V+ R ++ ++++ ++ N SA R+ DA+GV + H V S
Sbjct: 1 MTPERYQKIRRVLARRQPTLTVLMDEVNKPHNFSAILRTCDAVGVLTAHAVPPKSGVLPT 60
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
+ S A KW+ ++ L++ G ++ TH+ ++ + D++ PT +++
Sbjct: 61 FD-ATSGSAHKWVAVQRQPDAVTAVRQLQAAGMQVLATHLSQRSLDYREPDYTRPTCVLL 119
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G E GVSDEA ++D IPM GMV S NVSVAA ++ A R
Sbjct: 120 GAEKWGVSDEAAEIADANIVIPMFGMVQSLNVSVAAATILFEAQRQR 166
>gi|385332206|ref|YP_005886157.1| tRNA guanosine-2'-O-methyltransferase [Marinobacter adhaerens HP15]
gi|311695356|gb|ADP98229.1| tRNA guanosine-2'-O-methyltransferase [Marinobacter adhaerens HP15]
Length = 245
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R + R + ++ + + N+SA RS DA G+ ++HVV + +R
Sbjct: 1 MTPERLARIKQTLNTRQPDLSVLTDQVHKPRNLSAIIRSCDAFGLANMHVVW--PKEGFR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R + G+ W+ + E L+ +G+++ + AI D+D++ P I++
Sbjct: 59 AFRKTAGGSYNWVTTHTHRSMDEAIQSLKVQGHKLYAAQLSDRAIDFRDVDYTLPCTIIL 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
GNE GVS +A + +D IPM GMV+S NVS A I++ A R +L G
Sbjct: 119 GNEVDGVSVDAAAQADEHIVIPMMGMVESLNVSSACAIVLSEA--QRQRKLAG 169
>gi|110597515|ref|ZP_01385801.1| tRNA (guanosine-2'-O-)-methyltransferase [Chlorobium ferrooxidans
DSM 13031]
gi|110340834|gb|EAT59308.1| tRNA (guanosine-2'-O-)-methyltransferase [Chlorobium ferrooxidans
DSM 13031]
Length = 215
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 10/214 (4%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
+R + +++ +R + +V++ ++ N+SA RS D +G+ +H VS S ++
Sbjct: 5 DRFRKIRHMLLHRQPDLTVVMDNVNKAHNLSAIIRSCDTVGIGELHAVSYRKSIYTEQD- 63
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
+ GA KW + L+ + L + +I + ++D++ PTA+VVG E
Sbjct: 64 -AAAGASKWTTLHLYHEMATVYKKLSDQNMQILVASSSAGCMDFRNIDYTMPTALVVGAE 122
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEK 324
G+S+ AL +D +IPM GMV+S NVSVA +++ A R+ + G L E
Sbjct: 123 WDGISEAALHGADQTIAIPMFGMVESLNVSVATALILFEAQRQRSAK--GMYDSLQMEPG 180
Query: 325 QILLAEFSLRHSKSAISIVHEYAKRKETTHMPKL 358
F L + + + + R+E T P+L
Sbjct: 181 LFHQTLFELAYPRLSREL------RQEGTPYPRL 208
>gi|332663829|ref|YP_004446617.1| TrmH family RNA methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332332643|gb|AEE49744.1| RNA methyltransferase, TrmH family, group 3 [Haliscomenobacter
hydrossis DSM 1100]
Length = 247
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV +SP + ++ +V +N + ++++G++D N A RSA+ G ++ + S
Sbjct: 72 VVAFISPIPFQRLEDILPSVFENGQNPLIVLLDGITDVRNFGAIARSAEVFGAHALVISS 131
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
S++ E S GA + + + +L+ G ++ + + A S+ +DW
Sbjct: 132 KKSAQVNAEAVKTSAGALTLIPVCREKSMVGAIELLKLSGVKVYVSDLAATA-SIAALDW 190
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ P A+V+G+E+ G++ +L+D R IP G DS N SVAAGI+++ A R
Sbjct: 191 TIPVALVIGSESEGITPAVAALADDRFLIPQLGQTDSLNASVAAGIILYEATRQR 245
>gi|325186501|emb|CCA21041.1| hypothetical protein VOLCADRAFT_116506 [Albugo laibachii Nc14]
Length = 314
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 152 NVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE 211
V++ R+ + LV+E D N A R+A+ LGVQ V +V K + +R ++ +
Sbjct: 78 TVLQQRTSRIVLVLEASCDMFNQQAVLRTAECLGVQHVWIVEPAFYKAVKSDRRIARQSS 137
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVS 269
+W+ + + C L + GY + T + ++S+ S P AIV+G E GVS
Sbjct: 138 QWISVRRFKTSEACLVALFAEGYEVWATDLSQRSVSLQSGTLSVPDRLAIVMGRETDGVS 197
Query: 270 DEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH--AVCDRATRLVGCNGDLTSEEKQIL 327
+ L + R +P+ G DS N++VA G+++ ++C G + +EE+ L
Sbjct: 198 ETMLQAAQHRVYLPIYGFTDSLNLNVATGMVLFQIFSMCPE------MRGQMEAEERNTL 251
>gi|397689376|ref|YP_006526630.1| RNA methyltransferase, TrmH family, group 3 [Melioribacter roseus
P3M]
gi|395810868|gb|AFN73617.1| RNA methyltransferase, TrmH family, group 3 [Melioribacter roseus
P3M]
Length = 247
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
L++ V+ S Y + +E N +K++ + L+++ L D N+ A R+A+ GV
Sbjct: 63 LNAQGVIAIKSVYKFLDYRELIDNSMKSQE-PLILILDTLQDTHNLGAVLRTAECAGVDG 121
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
V + S +S+ +S GA L I + L+ +G+ I H+ +++
Sbjct: 122 VILTSNNSAPVNETVAKISAGALSHLKISRVANLMQPIKYLKEKGFWIVGAHLTEKSVNY 181
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+D+S P A+++GNE +G+ D IPMKG +DS NVSVA G+++ R
Sbjct: 182 DTIDYSGPIALIMGNEEKGIRRLVAEECDFIVKIPMKGKIDSLNVSVATGVILFEINRQR 241
Query: 309 ATR 311
+T+
Sbjct: 242 STK 244
>gi|402495272|ref|ZP_10842003.1| TrmH family RNA methyltransferase [Aquimarina agarilytica ZC1]
Length = 244
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV ++P + +E ++ + + ++++ L+D N A R+A+ +G + +
Sbjct: 70 VVAFVAPVDFHDLEEVIISTQEAGETPLLILLDQLTDARNFGAIIRTAECVGAHGIVIAK 129
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYR-IATTHVGMDAISVYDMD 252
++ + S GA + I D ++ +L++ G + +A T D S+Y +D
Sbjct: 130 TGAAPVSADTVKTSAGAVFNMPICKVDHLKDALFLLQASGIQTVAATEKTQD--SIYQVD 187
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ PTAI++G+E +GVS L L D + +PM G + S NVSVAAG+ ++ AV R
Sbjct: 188 FKIPTAIIMGSEGKGVSPGILKLVDHKAKLPMFGEISSLNVSVAAGVFLYEAVRQR 243
>gi|199598532|ref|ZP_03211949.1| rRNA methylase [Lactobacillus rhamnosus HN001]
gi|199590574|gb|EDY98663.1| rRNA methylase [Lactobacillus rhamnosus HN001]
Length = 260
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F + L+++ L D N+ + R+ADA GV + +
Sbjct: 84 VLLAMTPYAYATLDDLFKHAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGIIIPK 143
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + +L+ RG I T MD D
Sbjct: 144 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKILKDRGMWIFGT--AMDGQDYRQWDA 201
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TAIV+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 202 KGSTAIVIGNEGKGISPGIAKLMDATIAIPMVGHVQSLNASVAAGILMYQAFASR 256
>gi|116495758|ref|YP_807492.1| rRNA methylase [Lactobacillus casei ATCC 334]
gi|239630169|ref|ZP_04673200.1| rRNA methylase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|417981525|ref|ZP_12622190.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei 12A]
gi|417984344|ref|ZP_12624967.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei 21/1]
gi|417990631|ref|ZP_12631101.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei
A2-362]
gi|417993944|ref|ZP_12634280.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei CRF28]
gi|417999940|ref|ZP_12640144.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei
T71499]
gi|418003099|ref|ZP_12643200.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei
UCD174]
gi|418013996|ref|ZP_12653615.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei
Lpc-37]
gi|116105908|gb|ABJ71050.1| rRNA methylase [Lactobacillus casei ATCC 334]
gi|239527781|gb|EEQ66782.1| rRNA methylase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|410521664|gb|EKP96622.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei 12A]
gi|410525710|gb|EKQ00608.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei 21/1]
gi|410530853|gb|EKQ05616.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei CRF28]
gi|410534335|gb|EKQ08989.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei
A2-362]
gi|410538175|gb|EKQ12732.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei
T71499]
gi|410542929|gb|EKQ17330.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei
UCD174]
gi|410555087|gb|EKQ29050.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei
Lpc-37]
Length = 259
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F N L+++ L D N+ + R+ADA GV V +
Sbjct: 83 VLLAMTPYAYATLDDLFKNAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGVIIPK 142
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + L+ RG + T MD D
Sbjct: 143 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKTLKERGMWVFGT--AMDGQDYRKWDA 200
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 201 KGSTALVIGNEGKGISPGVAKLMDATIAIPMVGHVQSLNASVAAGILMYQAFASR 255
>gi|301067314|ref|YP_003789337.1| rRNA methylase [Lactobacillus casei str. Zhang]
gi|300439721|gb|ADK19487.1| rRNA methylase [Lactobacillus casei str. Zhang]
Length = 259
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F N L+++ L D N+ + R+ADA GV V +
Sbjct: 83 VLLAMTPYAYATLDDLFKNAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGVIIPK 142
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + L+ RG + T MD D
Sbjct: 143 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKTLKERGMWVFGT--AMDGQDYRKWDA 200
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 201 KGSTALVIGNEGKGISPGVAKLMDATIAIPMVGHVQSLNASVAAGILMYQAFASR 255
>gi|418010686|ref|ZP_12650457.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei Lc-10]
gi|410553265|gb|EKQ27268.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei Lc-10]
Length = 259
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F N L+++ L D N+ + R+ADA GV V +
Sbjct: 83 VLLAMTPYAYATLDDLFKNAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGVIIPK 142
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + L+ RG + T MD D
Sbjct: 143 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKTLKERGMWVFGT--AMDGQDYRKWDA 200
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 201 KGSTALVIGNEGKGISPGVAKLMDAMIAIPMVGHVQSLNASVAAGILMYQAFASR 255
>gi|258509319|ref|YP_003172070.1| RNA methyltransferase [Lactobacillus rhamnosus GG]
gi|385828955|ref|YP_005866727.1| rRNA methylase [Lactobacillus rhamnosus GG]
gi|257149246|emb|CAR88219.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
rhamnosus GG]
gi|259650600|dbj|BAI42762.1| rRNA methylase [Lactobacillus rhamnosus GG]
Length = 260
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F + L+++ L D N+ + R+ADA GV + +
Sbjct: 84 VLLAMTPYAYATLDDLFKHAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGIIIPK 143
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + +L+ RG I T MD D
Sbjct: 144 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKILKDRGMWIFGT--AMDGQDYRQWDA 201
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 202 KGSTALVIGNEGKGISPGIAKLMDATIAIPMAGHVQSLNASVAAGILMYQAFASR 256
>gi|298373202|ref|ZP_06983192.1| RNA methyltransferase, TrmH family, group 3 [Bacteroidetes oral
taxon 274 str. F0058]
gi|298276106|gb|EFI17657.1| RNA methyltransferase, TrmH family, group 3 [Bacteroidetes oral
taxon 274 str. F0058]
Length = 248
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
+ ++G++D N A R+ + GV ++ + S S+ + S GA +L + D
Sbjct: 103 VALDGVTDIRNFGAISRTCECAGVDAILLPSYCSATINADAVKTSAGALHYLPVCRTDNL 162
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
+ L++ G+ I + I+ D D+S PT +V+G E+RG+S E LSL D + I
Sbjct: 163 CQAIKFLKNSGFTIIALSEKAN-IAYTDQDYSSPTVLVLGAEDRGISSEVLSLCDSKVKI 221
Query: 283 PMKGMVDSFNVSVAAGILMHHAVCDR 308
P+ G ++S NVSVAAGI+++ AV R
Sbjct: 222 PVLGKIESLNVSVAAGIVIYEAVKSR 247
>gi|291005305|ref|ZP_06563278.1| putative tRNA/rRNA methyltransferase [Saccharopolyspora erythraea
NRRL 2338]
Length = 270
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPR 223
V+EG+ D N+ A FR+A ALGV V + S YR + VSMG + +
Sbjct: 126 VLEGVGDHENLGALFRNAAALGVDGVLLGEGCSDPLYRRSVRVSMGHVLRVPFTRLKSWP 185
Query: 224 ECFNVLRSRGYRIATTHVGMDAISVYDMDW-SCPTAIVVGNENRGVSDEALSLSDLRCSI 282
+ ++LR G+R+A DA+S+ + S P A+V+G+E G++++A++ +D+ I
Sbjct: 186 DDLDLLRDGGFRVAALTPRADAVSLREAALDSGPVAVVLGSEGPGLTEQAIAAADVAVRI 245
Query: 283 PMKGMVDSFNVSVAAGILMH 302
PM G VDS NV+ A I H
Sbjct: 246 PMAGGVDSLNVATAGAIAFH 265
>gi|227533680|ref|ZP_03963729.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|417987609|ref|ZP_12628164.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei 32G]
gi|418008848|ref|ZP_12648698.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei UW4]
gi|227188664|gb|EEI68731.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|410522929|gb|EKP97867.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei 32G]
gi|410545573|gb|EKQ19864.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei UW4]
Length = 259
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F N L+++ L D N+ + R+ADA GV V +
Sbjct: 83 VLLAMTPYAYATLDDLFKNAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGVIIPK 142
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + L+ RG + T MD D
Sbjct: 143 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKTLKERGMWVFGT--AMDGQDYRKWDA 200
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 201 KGSTALVIGNEGKGISPGIAKLMDATIAIPMVGHVQSLNASVAAGILMYQAFASR 255
>gi|417997099|ref|ZP_12637366.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei M36]
gi|418006031|ref|ZP_12646000.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei UW1]
gi|410533805|gb|EKQ08471.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei M36]
gi|410545051|gb|EKQ19359.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus casei UW1]
Length = 197
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F N L+++ L D N+ + R+ADA GV V +
Sbjct: 21 VLLAMTPYAYATLDDLFKNAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGVIIPK 80
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + L+ RG + T MD D
Sbjct: 81 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKTLKERGMWVFGT--AMDGQDYRKWDA 138
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 139 KGSTALVIGNEGKGISPGVAKLMDATIAIPMVGHVQSLNASVAAGILMYQAFASR 193
>gi|134097236|ref|YP_001102897.1| tRNA/rRNA methyltransferase [Saccharopolyspora erythraea NRRL 2338]
gi|133909859|emb|CAL99971.1| hypothetical tRNA/rRNA methyltransferase Rv0881 [Saccharopolyspora
erythraea NRRL 2338]
Length = 287
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPR 223
V+EG+ D N+ A FR+A ALGV V + S YR + VSMG + +
Sbjct: 143 VLEGVGDHENLGALFRNAAALGVDGVLLGEGCSDPLYRRSVRVSMGHVLRVPFTRLKSWP 202
Query: 224 ECFNVLRSRGYRIATTHVGMDAISVYDMDW-SCPTAIVVGNENRGVSDEALSLSDLRCSI 282
+ ++LR G+R+A DA+S+ + S P A+V+G+E G++++A++ +D+ I
Sbjct: 203 DDLDLLRDGGFRVAALTPRADAVSLREAALDSGPVAVVLGSEGPGLTEQAIAAADVAVRI 262
Query: 283 PMKGMVDSFNVSVAAGILMH 302
PM G VDS NV+ A I H
Sbjct: 263 PMAGGVDSLNVATAGAIAFH 282
>gi|229552882|ref|ZP_04441607.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus rhamnosus
LMS2-1]
gi|258540508|ref|YP_003175007.1| TrmH family group 3 RNA methyltransferase [Lactobacillus rhamnosus
Lc 705]
gi|385836146|ref|YP_005873921.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Lactobacillus rhamnosus ATCC 8530]
gi|421769978|ref|ZP_16206682.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
rhamnosus LRHMDP2]
gi|421773654|ref|ZP_16210294.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
rhamnosus LRHMDP3]
gi|229313751|gb|EEN79724.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus rhamnosus
LMS2-1]
gi|257152184|emb|CAR91156.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
rhamnosus Lc 705]
gi|355395638|gb|AER65068.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Lactobacillus rhamnosus ATCC 8530]
gi|411181558|gb|EKS48727.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
rhamnosus LRHMDP3]
gi|411183338|gb|EKS50477.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
rhamnosus LRHMDP2]
Length = 260
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F + L+++ L D N+ + R+ADA GV + +
Sbjct: 84 VLLAMTPYAYATLDDLFKHAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGIIIPK 143
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + +L+ RG I T MD D
Sbjct: 144 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKILKDRGMWIFGT--AMDGQDYRQWDA 201
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 202 KGSTALVIGNEGKGISPGIAKLMDATIAIPMVGHVQSLNASVAAGILMYQAFASR 256
>gi|418072172|ref|ZP_12709444.1| TrmH family group 3 RNA methyltransferase [Lactobacillus rhamnosus
R0011]
gi|423080359|ref|ZP_17068983.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
rhamnosus ATCC 21052]
gi|357537423|gb|EHJ21447.1| TrmH family group 3 RNA methyltransferase [Lactobacillus rhamnosus
R0011]
gi|357542701|gb|EHJ24738.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
rhamnosus ATCC 21052]
Length = 260
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F + L+++ L D N+ + R+ADA GV + +
Sbjct: 84 VLLAMTPYAYATLDDLFKHAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGIIIPK 143
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + +L+ RG I T MD D
Sbjct: 144 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKILKDRGMWIFGT--AMDGQDYRQWDA 201
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 202 KGSTALVIGNEGKGISPGIAKLMDATIAIPMVGHVQSLNASVAAGILMYQAFASR 256
>gi|149917858|ref|ZP_01906353.1| tRNA/rRNA methyltransferase (SpoU) [Plesiocystis pacifica SIR-1]
gi|149821378|gb|EDM80780.1| tRNA/rRNA methyltransferase (SpoU) [Plesiocystis pacifica SIR-1]
Length = 240
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 18/220 (8%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
++EAL+PY+ E R+ER +V+ R SV + +E D N +A RS +ALG +VHV++
Sbjct: 18 MLEALTPYVSERRRERIESVLDARLASVQVAIENPYDPHNAAAVVRSTEALGGWTVHVIA 77
Query: 194 CDSSKRYRENRHVSMGAEKWL---------DIELWDAPRECFNVLRSRGYRIATTHVGMD 244
+ +R + + G WL D E P G + +D
Sbjct: 78 --AHERILRAKGTTTGTHHWLETRNHRTLADFEAHLGPARAAGGAGGPGEGMILAGACVD 135
Query: 245 AISVY-DMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
A + ++ P ++ GNE+ G+S EA + DLR IP+ G +S+N+SV+A + + +
Sbjct: 136 ATHMLEELPVDRPLCLLFGNEHAGLSPEAKASCDLRFRIPIHGFAESYNLSVSAALTL-Y 194
Query: 304 AVCDRATRLVGCNGDLTS-----EEKQILLAEFSLRHSKS 338
+V R +G GDL E + L RH+K+
Sbjct: 195 SVTTRRRAAIGRAGDLEPGALAIERVRFYLQSIDRRHAKA 234
>gi|383449883|ref|YP_005356604.1| tRNA/rRNA methyltransferase [Flavobacterium indicum GPTSA100-9]
gi|380501505|emb|CCG52547.1| Probable tRNA/rRNA methyltransferase [Flavobacterium indicum
GPTSA100-9]
Length = 244
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
V +SP + +E + + + + L+++ LSD N A R+A+ GV + +
Sbjct: 71 VATISPIGFIDLEELIESTLAKKENPLFLILDQLSDARNFGAIIRTAECTGVDGIIIQKQ 130
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
S+ + S GA + I D ++ L+ G + D ++YD+D+S
Sbjct: 131 GSAPVNGDTVKTSAGAVFNVPICKVDHIKDAIFHLQGSGIKTVAATEKTDN-NIYDIDFS 189
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
P AI++GNE RGV+ L + D + +PM G ++S NVSVA G ++ AV R
Sbjct: 190 APVAIIMGNEERGVNPSVLKIVDEKAKLPMYGTIESLNVSVACGAFLYEAVRQR 243
>gi|302832103|ref|XP_002947616.1| hypothetical protein VOLCADRAFT_116506 [Volvox carteri f.
nagariensis]
gi|300266964|gb|EFJ51149.1| hypothetical protein VOLCADRAFT_116506 [Volvox carteri f.
nagariensis]
Length = 279
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 152 NVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE 211
V+ +R+ + LV+E +D N A R+A+ LGVQ+V +V S R +N + + A+
Sbjct: 31 TVLCSRTDRILLVLERCTDNQNYLACLRTAEILGVQNVWIVL---SPRGMKNEAL-IAAD 86
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT--AIVVGNENRGVS 269
W L P C R G T DAI ++ S P A+V+G E GVS
Sbjct: 87 GWTSGHLPPPPSACRRCWRMAGKSGPRTWRRRDAILLHGTALSLPARLAVVMGREADGVS 146
Query: 270 DEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH--AVCDRATRLVGCNGDLTSEEKQIL 327
E L+ + R +PM G DSFN+SVA +++HH C A GDLT K+ L
Sbjct: 147 REMLAAAHRRVCLPMYGFNDSFNLSVATSMVLHHLFLCCPEA------RGDLTEGRKRAL 200
Query: 328 LAEFSLRHSKS 338
E+ R ++S
Sbjct: 201 RTEWYGRLARS 211
>gi|194336785|ref|YP_002018579.1| tRNA guanosine-2'-O-methyltransferase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309262|gb|ACF43962.1| tRNA guanosine-2'-O-methyltransferase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 212
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 156 NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLD 215
+R + ++++ ++ N+SA RS D +G+ +H VS S ++N + GA KWL
Sbjct: 4 HRQPDLTVIMDNVNKAHNLSAIIRSCDGVGIDEIHAVSYRKSIYAKQN--AAAGASKWLT 61
Query: 216 IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSL 275
+ L + + + G +I + +D++ PTA+V+G E G+S+EA+
Sbjct: 62 LTLHPDIASAYRKVSACGMQILVATGKEGSRDFRAIDYTVPTALVMGAEWDGISEEAIKG 121
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+D ++PM GMV+S NVSVA +++ A RA +
Sbjct: 122 ADHAITVPMFGMVESLNVSVATAVILFEAQRQRAEK 157
>gi|335427935|ref|ZP_08554855.1| 23S rRNA methyltransferase [Haloplasma contractile SSD-17B]
gi|334893861|gb|EGM32070.1| 23S rRNA methyltransferase [Haloplasma contractile SSD-17B]
Length = 242
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Query: 116 FPYLDRYKCGDVYLSSSE-VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNV 174
F ++D+ + + + + ++ + PY E + VK L+++GL D N+
Sbjct: 48 FKFVDKVELDQLVKGNHQGIIAKVEPYNYYSIDEILNDAVKKDEDPFLLILDGLEDPHNL 107
Query: 175 SATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGY 234
A R+ADA GV + + S +S GA +++ + L+ +G
Sbjct: 108 GAIMRTADACGVHGIIIPKNRSVSLNATVAKLSSGAIEYVKVTKVTNITRTIKELKKKGI 167
Query: 235 RIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVS 294
IA T + +++ + D+ P A+V+GNE +G+S D +PMKG + S N S
Sbjct: 168 WIAGTDLDT-SVTYKNSDYKLPLALVIGNEGKGISRLVKDNCDFLVKLPMKGKISSLNAS 226
Query: 295 VAAGILMHHAVCDRA 309
VAAGILM+ R+
Sbjct: 227 VAAGILMYEIYSQRS 241
>gi|260061888|ref|YP_003194968.1| tRNA:rRNA methyltransferase [Robiginitalea biformata HTCC2501]
gi|88786021|gb|EAR17190.1| putative tRNA:rRNA methyltransferase [Robiginitalea biformata
HTCC2501]
Length = 244
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV LSP E + + L+++G+SD N+ A R+A+ GV + + +
Sbjct: 70 VVAVLSPITYREHTALIDETLARDKAPLFLLLDGVSDVRNLGAIIRTAECAGVSGLFLPA 129
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
S+ + S GA L I ++ L++ G R+ ++ ++Y+ D
Sbjct: 130 SGSAPVSADTIKTSAGAAFNLPIARSPHLKDVVYYLQASGVRLVAATEKAES-TLYEADL 188
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
+ P A+++G+E+RG+ L L D++ +PM+G ++S NVSVA G+ + A RA
Sbjct: 189 TGPLALIMGSEDRGIHPSLLKLCDIQAQLPMQGSIESLNVSVACGVFLFEAQRQRA 244
>gi|431301311|ref|ZP_19507630.1| RNA methyltransferase [Enterococcus faecium E1626]
gi|430580501|gb|ELB18968.1| RNA methyltransferase [Enterococcus faecium E1626]
Length = 254
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSKDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNIYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|358448154|ref|ZP_09158659.1| tRNA guanosine-2'-O-methyltransferase [Marinobacter manganoxydans
MnI7-9]
gi|357227582|gb|EHJ06042.1| tRNA guanosine-2'-O-methyltransferase [Marinobacter manganoxydans
MnI7-9]
Length = 245
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R + R + ++ + + N+SA RS DA G+ ++HVV + +R
Sbjct: 1 MTPERLARIKQTLNTRQPDLSVLTDQVHKPRNLSAIIRSCDAFGLANMHVVW--PKEGFR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R + G+ W+ + E L+ +G ++ + AI + D++ P +++
Sbjct: 59 AFRKTAGGSYNWVTTHTHRSMDEAIESLKGQGNKLYAAQLSDRAIDFREADYTVPCTVIM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
GNE GVS +A + +D IPM GMV+S NVS A I++ A R +L G
Sbjct: 119 GNEVDGVSPDAAAQADEHIVIPMMGMVESLNVSSACAIILSEA--QRQRKLAG 169
>gi|430825755|ref|ZP_19443956.1| RNA methyltransferase [Enterococcus faecium E0164]
gi|430445819|gb|ELA55536.1| RNA methyltransferase [Enterococcus faecium E0164]
Length = 254
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPEFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|344202019|ref|YP_004787162.1| TrmH family RNA methyltransferase [Muricauda ruestringensis DSM
13258]
gi|343953941|gb|AEM69740.1| RNA methyltransferase, TrmH family, group 3 [Muricauda
ruestringensis DSM 13258]
Length = 243
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV +SP + +E V+ + L+++G+SD N A R+A+ GV + +
Sbjct: 68 VVAQISPVQFHQFEELVEQVLSKEQLPLFLMLDGVSDVRNFGAIIRTAECCGVHGIIIPK 127
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAISVYDMD 252
++ + S GA + I D ++ L+S G I T D I Y +D
Sbjct: 128 NGAAPITDDTVKTSAGAAFNVPIAKVDHLKDAIFYLQSSGIVITGATEKAKDEI--YGVD 185
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ PTAI++G+E +G+S L++ D + +P+ G + S NVSVA G+ ++ V R
Sbjct: 186 FNQPTAIIMGSEEKGISPSTLNIIDHQAKLPLLGKIGSLNVSVACGVFLYEVVRQR 241
>gi|294616353|ref|ZP_06696146.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1636]
gi|424898819|ref|ZP_18322373.1| RNA methyltransferase, TrmH family [Enterococcus faecium R497]
gi|430847722|ref|ZP_19465556.1| RNA methyltransferase [Enterococcus faecium E1133]
gi|430849350|ref|ZP_19467131.1| RNA methyltransferase [Enterococcus faecium E1185]
gi|431077000|ref|ZP_19495036.1| RNA methyltransferase [Enterococcus faecium E1604]
gi|431414381|ref|ZP_19512200.1| RNA methyltransferase [Enterococcus faecium E1630]
gi|431750242|ref|ZP_19538967.1| RNA methyltransferase [Enterococcus faecium E2297]
gi|431759593|ref|ZP_19548204.1| RNA methyltransferase [Enterococcus faecium E3346]
gi|291590867|gb|EFF22583.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1636]
gi|402932039|gb|EJX51575.1| RNA methyltransferase, TrmH family [Enterococcus faecium R497]
gi|430536396|gb|ELA76764.1| RNA methyltransferase [Enterococcus faecium E1133]
gi|430538196|gb|ELA78495.1| RNA methyltransferase [Enterococcus faecium E1185]
gi|430566455|gb|ELB05568.1| RNA methyltransferase [Enterococcus faecium E1604]
gi|430589114|gb|ELB27259.1| RNA methyltransferase [Enterococcus faecium E1630]
gi|430610171|gb|ELB47325.1| RNA methyltransferase [Enterococcus faecium E2297]
gi|430625774|gb|ELB62377.1| RNA methyltransferase [Enterococcus faecium E3346]
Length = 254
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSKDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|257884108|ref|ZP_05663761.1| rRNA methyltransferase [Enterococcus faecium 1,231,501]
gi|431230091|ref|ZP_19502294.1| RNA methyltransferase [Enterococcus faecium E1622]
gi|431764406|ref|ZP_19552947.1| RNA methyltransferase [Enterococcus faecium E4215]
gi|257819946|gb|EEV47094.1| rRNA methyltransferase [Enterococcus faecium 1,231,501]
gi|430574077|gb|ELB12855.1| RNA methyltransferase [Enterococcus faecium E1622]
gi|430631057|gb|ELB67388.1| RNA methyltransferase [Enterococcus faecium E4215]
Length = 254
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|430851941|ref|ZP_19469676.1| RNA methyltransferase [Enterococcus faecium E1258]
gi|430542523|gb|ELA82631.1| RNA methyltransferase [Enterococcus faecium E1258]
Length = 254
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLSEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|430830975|ref|ZP_19449030.1| RNA methyltransferase [Enterococcus faecium E0333]
gi|430482197|gb|ELA59328.1| RNA methyltransferase [Enterococcus faecium E0333]
Length = 254
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLSEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|430827851|ref|ZP_19445982.1| RNA methyltransferase [Enterococcus faecium E0269]
gi|431108362|ref|ZP_19497513.1| RNA methyltransferase [Enterococcus faecium E1613]
gi|430484197|gb|ELA61227.1| RNA methyltransferase [Enterococcus faecium E0269]
gi|430569486|gb|ELB08490.1| RNA methyltransferase [Enterococcus faecium E1613]
Length = 254
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSKDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|224000635|ref|XP_002289990.1| rRNA methyltransferase [Thalassiosira pseudonana CCMP1335]
gi|220975198|gb|EED93527.1| rRNA methyltransferase [Thalassiosira pseudonana CCMP1335]
Length = 302
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDI 216
R+ + +VVE ++ N SA R+A+ALGVQ V+++S + + V A +WL +
Sbjct: 1 RTSRLVIVVERCTNDHNYSAILRTAEALGVQHVYIIS----PKTINSTLVDEAATEWLTV 56
Query: 217 ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLS 276
+D +EC LRS I T + A S + AIV G E G + E L+ +
Sbjct: 57 HEFDDTKECIETLRSENREIWVTDLSQVA-SCLTEEGIQKVAIVFGTEAVGCTAEMLNAA 115
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHH 303
DLR +P++G DS N+SVA +++H
Sbjct: 116 DLRVYLPLRGFADSLNLSVATALVVHQ 142
>gi|293553832|ref|ZP_06674447.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1039]
gi|406591097|ref|ZP_11065404.1| RNA methyltransferase [Enterococcus sp. GMD1E]
gi|410936861|ref|ZP_11368724.1| RNA methyltransferase [Enterococcus sp. GMD5E]
gi|415893540|ref|ZP_11550185.1| Uncharacterized tRNA/rRNA methyltransferase ysgA [Enterococcus
faecium E4453]
gi|431746482|ref|ZP_19535308.1| RNA methyltransferase [Enterococcus faecium E2134]
gi|291602038|gb|EFF32275.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1039]
gi|364092686|gb|EHM35033.1| Uncharacterized tRNA/rRNA methyltransferase ysgA [Enterococcus
faecium E4453]
gi|404468263|gb|EKA13266.1| RNA methyltransferase [Enterococcus sp. GMD1E]
gi|410734891|gb|EKQ76809.1| RNA methyltransferase [Enterococcus sp. GMD5E]
gi|430608716|gb|ELB45955.1| RNA methyltransferase [Enterococcus faecium E2134]
Length = 254
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|430841708|ref|ZP_19459626.1| RNA methyltransferase [Enterococcus faecium E1007]
gi|430493766|gb|ELA70050.1| RNA methyltransferase [Enterococcus faecium E1007]
Length = 254
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFMVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|430819656|ref|ZP_19438304.1| RNA methyltransferase [Enterococcus faecium E0045]
gi|430440344|gb|ELA50606.1| RNA methyltransferase [Enterococcus faecium E0045]
Length = 254
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLISDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLSEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|345867078|ref|ZP_08819096.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Bizionia argentinensis JUB59]
gi|344048573|gb|EGV44179.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Bizionia argentinensis JUB59]
Length = 245
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 3/176 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV +SP + ++ ++V+++ + L+++ LSD N A R+A+ GV + +
Sbjct: 70 VVAQISPIAYYDIEDLVLDVIESGKTPLFLLLDQLSDVRNFGAIIRTAECTGVNGIIIQK 129
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYR-IATTHVGMDAISVYDMD 252
S+ + S GA + I D ++ +++ G + IA T D ++YD+D
Sbjct: 130 KGSAPINGDTIKTSAGAVFKMPICRVDHIKDAMFHMQASGIKLIAATEKTND--TIYDID 187
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P AI++G+E RG++ L L+D + +P+ G ++S NVSVA G ++ V R
Sbjct: 188 FTGPCAIIMGSEGRGINPSVLKLADHKAKLPLLGTIESLNVSVACGAFLYEVVRQR 243
>gi|294623039|ref|ZP_06701928.1| RNA methyltransferase, TrmH family [Enterococcus faecium U0317]
gi|425032784|ref|ZP_18437795.1| RNA methyltransferase, TrmH family [Enterococcus faecium 515]
gi|431003757|ref|ZP_19488855.1| RNA methyltransferase [Enterococcus faecium E1578]
gi|431775501|ref|ZP_19563773.1| RNA methyltransferase [Enterococcus faecium E2560]
gi|291597595|gb|EFF28757.1| RNA methyltransferase, TrmH family [Enterococcus faecium U0317]
gi|403011778|gb|EJY25061.1| RNA methyltransferase, TrmH family [Enterococcus faecium 515]
gi|430561846|gb|ELB01100.1| RNA methyltransferase [Enterococcus faecium E1578]
gi|430642770|gb|ELB78536.1| RNA methyltransferase [Enterococcus faecium E2560]
Length = 254
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMMLTSKDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|406672724|ref|ZP_11079949.1| hypothetical protein HMPREF9700_00491 [Bergeyella zoohelcum CCUG
30536]
gi|423315799|ref|ZP_17293704.1| hypothetical protein HMPREF9699_00275 [Bergeyella zoohelcum ATCC
43767]
gi|405585515|gb|EKB59339.1| hypothetical protein HMPREF9699_00275 [Bergeyella zoohelcum ATCC
43767]
gi|405587268|gb|EKB60996.1| hypothetical protein HMPREF9700_00491 [Bergeyella zoohelcum CCUG
30536]
Length = 179
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 2/145 (1%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
V +V++ + NV A FR+ADA ++ + + + +RE ++GA + ++ E
Sbjct: 27 VIVVLDNIRSMHNVGAFFRTADAFIMEKIILCGITPTPPHREIHKAALGATESVNWEYHK 86
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISV--YDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
E N L+S GY I ++I++ + +D A+V GNE G+SDEAL+ D
Sbjct: 87 TISETLNTLKSEGYAITGIEQTNNSIAMNQFPIDTKKKYALVFGNEVDGLSDEALNSYDS 146
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHH 303
IP G S NVSV GI+M+H
Sbjct: 147 FIEIPQLGTKHSLNVSVCGGIVMYH 171
>gi|373957707|ref|ZP_09617667.1| RNA methyltransferase, TrmH family, group 3 [Mucilaginibacter
paludis DSM 18603]
gi|373894307|gb|EHQ30204.1| RNA methyltransferase, TrmH family, group 3 [Mucilaginibacter
paludis DSM 18603]
Length = 269
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ +SP + ++ V + + L+++G++D NV A R+A+ GV ++ V +
Sbjct: 89 VIAIISPITYYKIEDIIPMVFEKGEVPLILILDGVTDVRNVGAIARTAECAGVHAIVVPA 148
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIAT-THVGMDAISVYDMD 252
S++ + S GA + + + + L+S G +I T D I Y D
Sbjct: 149 KGSAQINPDTIKTSAGALYNIPVCRESSLLQTVKFLQSSGLQIVCCTEKTTDFI--YAPD 206
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
++ PTAIV+G E+ GVS+E + ++D IPM G ++S NVSV+ G++++ A+
Sbjct: 207 YTLPTAIVMGGEDDGVSNEIIRIADHLAKIPMYGEIESLNVSVSTGVILYEAI 259
>gi|397904504|ref|ZP_10505414.1| FIG011178: rRNA methylase [Caloramator australicus RC3]
gi|397162459|emb|CCJ32748.1| FIG011178: rRNA methylase [Caloramator australicus RC3]
Length = 253
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 162 CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDA 221
++ +G+ D GN+ R+ DA G ++ ++ + +MG+ + I +D
Sbjct: 105 VVIADGVQDPGNLGTIIRTLDAAGADALIIIKGTVDPYNSKTLRSTMGSIFRVPIVYFDD 164
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
+ + L+++G+ I T + + + +YD +++ TA+V+GNE G+S E + LS +
Sbjct: 165 FEKASDYLKNKGFNIYATSLEAEKL-IYDYNFNEKTALVIGNEANGISKEHIELSTHKIK 223
Query: 282 IPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
IPM G +S N +VA+ I+++ V R TR
Sbjct: 224 IPMIGKAESLNAAVASAIVIYEVVRQRLTR 253
>gi|425055729|ref|ZP_18459199.1| RNA methyltransferase, TrmH family [Enterococcus faecium 505]
gi|430834188|ref|ZP_19452195.1| RNA methyltransferase [Enterococcus faecium E0679]
gi|403033230|gb|EJY44746.1| RNA methyltransferase, TrmH family [Enterococcus faecium 505]
gi|430485419|gb|ELA62325.1| RNA methyltransferase [Enterococcus faecium E0679]
Length = 254
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMMLTSKDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFMVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|119356408|ref|YP_911052.1| RNA methyltransferase [Chlorobium phaeobacteroides DSM 266]
gi|119353757|gb|ABL64628.1| RNA methyltransferase, TrmH family, group 3 [Chlorobium
phaeobacteroides DSM 266]
Length = 252
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
+V A+S Y +EE ++ N ++ + L+++GL D N+ A R+A+A+ +V ++
Sbjct: 82 LVSAVSYYTIEEVLDKPRN-----TFPLLLILQGLEDPHNIGAIIRTAEAVAADAVLLIE 136
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDA-ISVYDMD 252
S S GA + + + C L R + I MDA I+ D+D
Sbjct: 137 GKGSPVNATVHKASAGALSHMRVCKVKSLVRCLEFLHERKFLIIAAD--MDAEINYTDID 194
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ AIV+G E G++ EA+ D IPM G V+S NVSV AG+L++ A+ R
Sbjct: 195 LTKALAIVLGAEGSGLAPEAVKFCDHTVRIPMAGCVESLNVSVTAGVLLYEAMRQR 250
>gi|359412510|ref|ZP_09204975.1| tRNA/rRNA methyltransferase (SpoU) [Clostridium sp. DL-VIII]
gi|357171394|gb|EHI99568.1| tRNA/rRNA methyltransferase (SpoU) [Clostridium sp. DL-VIII]
Length = 260
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR-HVSMGAEKWLDIELWDA 221
L+ + L D GN+ R+A A GV + +++ + Y E +MG+ ++ I+ D
Sbjct: 114 LLCDKLQDPGNLGTIIRTAHAAGVSGI-ILTKGTVDIYNEKTIRSTMGSIFYIPIQYDDE 172
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
L+S+G+ + T + D + +D+D + VGNE GVS+E +S++D +
Sbjct: 173 DFSLVKELKSKGFNLVATSLDTDK-NFFDVDLKGKVLLTVGNEGNGVSEEVISMADTKVK 231
Query: 282 IPMKGMVDSFNVSVAAGILMHHAV 305
IPM G +S NV++AA ++M+ V
Sbjct: 232 IPMPGNAESLNVAIAASVIMYEKV 255
>gi|397575701|gb|EJK49840.1| hypothetical protein THAOC_31244 [Thalassiosira oceanica]
Length = 580
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 132 SEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
S + AL+PY+ R ER V+ R+ + E S+ NV A R+ D+ GVQ V
Sbjct: 77 SRSIAALAPYVRPRRLERIDEVLSRRTGRARFLFENPSNPSNVWACLRTLDSFGVQHADV 136
Query: 192 V----SCDSSKRYRENR--HVSMGAEKWLDIELWDAPRECFNVLRSR-GYRIATTHVGMD 244
V + D + R +MG+ W+ + + + E V+R G + + +G
Sbjct: 137 VVDPDAYDGKAAVMQKRGMRTAMGSAVWMTVRQFGSADEALRVIRDEEGCAVYASDLGEG 196
Query: 245 AISVYDMDWS-------CPTA--------------------IVVGNENRGVSDEALSLSD 277
++ V D+ W CP A IV+GNE+RG+SD S +D
Sbjct: 197 SVDVRDLSWDGRDCPERCPDAPAGGGGRDAGDGVAEYRPVCIVMGNEDRGISDGMRSAAD 256
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHH 303
+PM G +SFN+SVA + + +
Sbjct: 257 ATFRLPMVGFAESFNLSVATAVTLAY 282
>gi|83815691|ref|YP_445907.1| SpoU rRNA methylase family protein [Salinibacter ruber DSM 13855]
gi|294507817|ref|YP_003571875.1| methyltransferase [Salinibacter ruber M8]
gi|83757085|gb|ABC45198.1| SpoU rRNA methylase family protein [Salinibacter ruber DSM 13855]
gi|294344144|emb|CBH24922.1| methyltransferase [Salinibacter ruber M8]
Length = 187
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 159 YSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
+ V LVV + NV + FR++DA ++ +H+ + +++ ++GA+ ++
Sbjct: 23 HPVRLVVHNVRSIHNVGSMFRTSDAARIEHIHLTGFTGTPEHKDLHKTALGAQDAVEWSQ 82
Query: 219 WDAPRECFNVLRSRGYRIA----TTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALS 274
D PR L+ GY IA T H + D + P A+VVGNE RG+ + L
Sbjct: 83 HDEPRPLLRDLKDAGYTIAALEQTDHTQRPDAAPAD---AFPIALVVGNEVRGIEPDVLD 139
Query: 275 LSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGD 318
DL IP G S NV VA GI ++ + R+ L+G GD
Sbjct: 140 AVDLALEIPQYGAKISLNVGVAYGIAVYDLIR-RSRTLLGPPGD 182
>gi|191639244|ref|YP_001988410.1| TRNA/rRNA methyltransferase [Lactobacillus casei BL23]
gi|385820997|ref|YP_005857384.1| TrmH family RNA methyltransferase [Lactobacillus casei LC2W]
gi|385824180|ref|YP_005860522.1| TrmH family RNA methyltransferase [Lactobacillus casei BD-II]
gi|190713546|emb|CAQ67552.1| TRNA/rRNA methyltransferase [Lactobacillus casei BL23]
gi|327383324|gb|AEA54800.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus casei
LC2W]
gi|327386507|gb|AEA57981.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus casei
BD-II]
Length = 259
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F N L+++ L D N+ + R+ADA GV V +
Sbjct: 83 VLLAMTPYAYATLDDLFKNAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGVIIPK 142
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + L+ R + T MD D
Sbjct: 143 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKTLKERSMWVFGT--AMDGQDYRKWDA 200
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 201 KGSTALVIGNEGKGISPGVAKLMDAMIAIPMVGHVQSLNASVAAGILMYQAFASR 255
>gi|295396932|ref|ZP_06807055.1| RNA methyltransferase [Aerococcus viridans ATCC 11563]
gi|294974825|gb|EFG50529.1| RNA methyltransferase [Aerococcus viridans ATCC 11563]
Length = 271
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV A++ Y E ++ F + + +V++G+ D N+ + R+ADA GV V + +
Sbjct: 95 VVMAIAAYKYAELEDIFKKAEEANEDPIIMVLDGIEDPHNLGSILRTADASGVHGVIIQN 154
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ + S GA + + + + ++L+ RG + T M S++ MD
Sbjct: 155 RRAVGLTQVVAKTSTGAIEHVPVVRVTNISKTIDLLKERGVWVFGTD--MKGQSMWQMDA 212
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ P A+V+GNE +GVS D +IPM+G V S N SVAAG+LM+ R
Sbjct: 213 ALPIAVVIGNEGKGVSPGVKKHLDGMITIPMRGHVQSLNASVAAGLLMYQIYQSR 267
>gi|424951414|ref|ZP_18366512.1| RNA methyltransferase, TrmH family [Enterococcus faecium R496]
gi|424975284|ref|ZP_18388456.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1137]
gi|424982558|ref|ZP_18395207.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV99]
gi|425022009|ref|ZP_18432222.1| RNA methyltransferase, TrmH family [Enterococcus faecium C497]
gi|425026905|ref|ZP_18434975.1| RNA methyltransferase, TrmH family [Enterococcus faecium C1904]
gi|425046160|ref|ZP_18450200.1| RNA methyltransferase, TrmH family [Enterococcus faecium 510]
gi|425053490|ref|ZP_18457032.1| RNA methyltransferase, TrmH family [Enterococcus faecium 506]
gi|425059004|ref|ZP_18462356.1| RNA methyltransferase, TrmH family [Enterococcus faecium 504]
gi|427396436|ref|ZP_18889195.1| hypothetical protein HMPREF9307_01371 [Enterococcus durans
FB129-CNAB-4]
gi|430835566|ref|ZP_19453555.1| RNA methyltransferase [Enterococcus faecium E0680]
gi|430855160|ref|ZP_19472870.1| RNA methyltransferase [Enterococcus faecium E1392]
gi|430857875|ref|ZP_19475508.1| RNA methyltransferase [Enterococcus faecium E1552]
gi|431147907|ref|ZP_19499273.1| RNA methyltransferase [Enterococcus faecium E1620]
gi|431252064|ref|ZP_19504122.1| RNA methyltransferase [Enterococcus faecium E1623]
gi|431374439|ref|ZP_19510127.1| RNA methyltransferase [Enterococcus faecium E1627]
gi|431513932|ref|ZP_19515980.1| RNA methyltransferase [Enterococcus faecium E1634]
gi|431547501|ref|ZP_19519068.1| RNA methyltransferase [Enterococcus faecium E1731]
gi|431710426|ref|ZP_19525238.1| RNA methyltransferase [Enterococcus faecium E1904]
gi|431742852|ref|ZP_19531736.1| RNA methyltransferase [Enterococcus faecium E2071]
gi|431755095|ref|ZP_19543751.1| RNA methyltransferase [Enterococcus faecium E2883]
gi|431769221|ref|ZP_19557645.1| RNA methyltransferase [Enterococcus faecium E1321]
gi|431781649|ref|ZP_19569793.1| RNA methyltransferase [Enterococcus faecium E6012]
gi|431785969|ref|ZP_19573989.1| RNA methyltransferase [Enterococcus faecium E6045]
gi|447912326|ref|YP_007393738.1| rRNA methylase [Enterococcus faecium NRRL B-2354]
gi|402930113|gb|EJX49806.1| RNA methyltransferase, TrmH family [Enterococcus faecium R496]
gi|402954183|gb|EJX71826.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1137]
gi|402960556|gb|EJX77687.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV99]
gi|403004639|gb|EJY18427.1| RNA methyltransferase, TrmH family [Enterococcus faecium C497]
gi|403005347|gb|EJY19066.1| RNA methyltransferase, TrmH family [Enterococcus faecium C1904]
gi|403025064|gb|EJY37171.1| RNA methyltransferase, TrmH family [Enterococcus faecium 510]
gi|403030274|gb|EJY41971.1| RNA methyltransferase, TrmH family [Enterococcus faecium 506]
gi|403036723|gb|EJY48064.1| RNA methyltransferase, TrmH family [Enterococcus faecium 504]
gi|425723106|gb|EKU85997.1| hypothetical protein HMPREF9307_01371 [Enterococcus durans
FB129-CNAB-4]
gi|430489257|gb|ELA65881.1| RNA methyltransferase [Enterococcus faecium E0680]
gi|430547085|gb|ELA87027.1| RNA methyltransferase [Enterococcus faecium E1552]
gi|430547446|gb|ELA87378.1| RNA methyltransferase [Enterococcus faecium E1392]
gi|430575559|gb|ELB14270.1| RNA methyltransferase [Enterococcus faecium E1620]
gi|430578490|gb|ELB17042.1| RNA methyltransferase [Enterococcus faecium E1623]
gi|430583063|gb|ELB21452.1| RNA methyltransferase [Enterococcus faecium E1627]
gi|430586188|gb|ELB24449.1| RNA methyltransferase [Enterococcus faecium E1634]
gi|430591170|gb|ELB29209.1| RNA methyltransferase [Enterococcus faecium E1731]
gi|430596349|gb|ELB34184.1| RNA methyltransferase [Enterococcus faecium E1904]
gi|430607821|gb|ELB45122.1| RNA methyltransferase [Enterococcus faecium E2071]
gi|430617664|gb|ELB54530.1| RNA methyltransferase [Enterococcus faecium E2883]
gi|430627759|gb|ELB64233.1| RNA methyltransferase [Enterococcus faecium E1321]
gi|430646584|gb|ELB82059.1| RNA methyltransferase [Enterococcus faecium E6045]
gi|430648867|gb|ELB84256.1| RNA methyltransferase [Enterococcus faecium E6012]
gi|445188035|gb|AGE29677.1| rRNA methylase [Enterococcus faecium NRRL B-2354]
Length = 254
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L + V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLADVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|294620204|ref|ZP_06699538.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1679]
gi|314940174|ref|ZP_07847352.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133a04]
gi|314942409|ref|ZP_07849252.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133C]
gi|314952315|ref|ZP_07855326.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133A]
gi|314994242|ref|ZP_07859545.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133B]
gi|314997157|ref|ZP_07862143.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133a01]
gi|424963509|ref|ZP_18377721.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1190]
gi|424972435|ref|ZP_18385774.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1139]
gi|424978996|ref|ZP_18391868.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1123]
gi|425037178|ref|ZP_18441863.1| RNA methyltransferase, TrmH family [Enterococcus faecium 514]
gi|425042262|ref|ZP_18446609.1| RNA methyltransferase, TrmH family [Enterococcus faecium 511]
gi|425048174|ref|ZP_18452096.1| RNA methyltransferase, TrmH family [Enterococcus faecium 509]
gi|431771085|ref|ZP_19559472.1| RNA methyltransferase [Enterococcus faecium E1644]
gi|431772528|ref|ZP_19560866.1| RNA methyltransferase [Enterococcus faecium E2369]
gi|291593557|gb|EFF25097.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1679]
gi|313588731|gb|EFR67576.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133a01]
gi|313591329|gb|EFR70174.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133B]
gi|313595574|gb|EFR74419.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133A]
gi|313598809|gb|EFR77654.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133C]
gi|313640613|gb|EFS05193.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133a04]
gi|402949014|gb|EJX67107.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1190]
gi|402954240|gb|EJX71878.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1139]
gi|402959659|gb|EJX76897.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1123]
gi|403011992|gb|EJY25265.1| RNA methyltransferase, TrmH family [Enterococcus faecium 514]
gi|403023860|gb|EJY36076.1| RNA methyltransferase, TrmH family [Enterococcus faecium 511]
gi|403031450|gb|EJY43056.1| RNA methyltransferase, TrmH family [Enterococcus faecium 509]
gi|430633865|gb|ELB70015.1| RNA methyltransferase [Enterococcus faecium E1644]
gi|430637607|gb|ELB73606.1| RNA methyltransferase [Enterococcus faecium E2369]
Length = 254
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L + V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLADVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|291458961|ref|ZP_06598351.1| RNA methyltransferase, TrmH family [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418215|gb|EFE91934.1| RNA methyltransferase, TrmH family [Oribacterium sp. oral taxon 078
str. F0262]
Length = 248
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR-HVSMGAEKWLDIELWDA 221
L++E L D GN+ FR A+A GV +++ S D + Y +MG+ L +
Sbjct: 99 LLLESLQDPGNLGTIFRLAEAAGVNGIYM-SSDCADIYSPKLVRSTMGSLYRLPFRIVPD 157
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
+E L+ +G R +H+ + + YD D+ PTA ++GNE RG+S E +D+R
Sbjct: 158 LKETIAELKKKGVRCFASHL-LGEKAHYDCDFRSPTAFLIGNEGRGLSPELSEAADIRLR 216
Query: 282 IPMKGMVDSFNVSVAAGILMHHAVCDR 308
IPMKG V+S N + AA IL + + R
Sbjct: 217 IPMKGGVESLNAAAAAAILSYETLRQR 243
>gi|304405070|ref|ZP_07386730.1| tRNA/rRNA methyltransferase (SpoU) [Paenibacillus curdlanolyticus
YK9]
gi|304345949|gb|EFM11783.1| tRNA/rRNA methyltransferase (SpoU) [Paenibacillus curdlanolyticus
YK9]
Length = 264
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 10/157 (6%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEK 212
R S+ +V++G+ D GNV RSADA+G +V + V + K R +MG+
Sbjct: 114 REQSLVVVLDGVRDPGNVGTIIRSADAVGADAVVLGRGCVDLYNPKTVRS----TMGSLF 169
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
L + D E + RG R+A T + A+S YD DW+ T +++G+E+ G+S E
Sbjct: 170 HLPVIEADL-LELLPKAQERGIRLAATSL-QSAVSCYDCDWTSATWLLMGSESDGLSPEV 227
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
L L+D IP++G +S NV++AA ++++ A+ R
Sbjct: 228 LELADQSVIIPIRGRAESLNVAMAATVILYEALRQRG 264
>gi|324999431|ref|ZP_08120543.1| rRNA methylase [Pseudonocardia sp. P1]
Length = 267
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 149 RFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM 208
R ++ ++ R ++ LV EG+ GNV A R+A+A GV +V + + D + N +V
Sbjct: 101 RPLDELELRPDALVLVAEGIEKPGNVGAMLRTAEACGVDAVVIATPDRAGTDFANPNVVR 160
Query: 209 GAEKWL-DIELWDAPR-ECFNVLRSRGYR-IATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
++ + + + AP E LR RG R + TT G + D+ + PTA+V+G E
Sbjct: 161 ASKGTVFAVPVASAPTAEVQEWLRRRGVRSVVTTPAGTTELGRADL--TGPTALVIGTEA 218
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
GV+ L+ +D IPM+G V+S N S+AA +++ AV R
Sbjct: 219 TGVTGPWLAGADATVVIPMRGTVNSLNASIAAAVVLFEAVRQR 261
>gi|257879970|ref|ZP_05659623.1| RNA methyltransferase [Enterococcus faecium 1,230,933]
gi|257814198|gb|EEV42956.1| RNA methyltransferase [Enterococcus faecium 1,230,933]
Length = 223
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 28 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 87
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L + V+
Sbjct: 88 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLADVIPVM 146
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 147 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 206
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 207 SLNVGVAAGIVLYH 220
>gi|430843778|ref|ZP_19461677.1| RNA methyltransferase [Enterococcus faecium E1050]
gi|430497637|gb|ELA73674.1| RNA methyltransferase [Enterococcus faecium E1050]
Length = 254
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS + LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQKILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|189502510|ref|YP_001958227.1| hypothetical protein Aasi_1164 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497951|gb|ACE06498.1| hypothetical protein Aasi_1164 [Candidatus Amoebophilus asiaticus
5a2]
Length = 246
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 127 VYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGV 186
V L+ +V LSP + + + + ++++G++D GN+ A R+A +G
Sbjct: 63 VPLNHQGIVALLSPVPLVTLSHIVQDTYEKGELPLIIILDGVTDVGNLGAIVRTAVCVGA 122
Query: 187 QSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAI 246
++ + S+ S GA L I + N L++ G ++ H
Sbjct: 123 HALVLPKQGSASLGSGAMKTSAGALAHLPICREANLQASINYLQNSGLQVIACHEKTQT- 181
Query: 247 SVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVC 306
S+Y + + PTAI++G+E++G+ + L+ D++ SIPM G + S NVSVAA I+++ +
Sbjct: 182 SIYQVKLTVPTAILLGSEDKGIQPQLLNKVDVQASIPMVGPISSLNVSVAAAIILYESFR 241
Query: 307 DR 308
R
Sbjct: 242 QR 243
>gi|409998107|ref|YP_006752508.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus casei
W56]
gi|406359119|emb|CCK23389.1| Putative TrmH family tRNA/rRNA methyltransferase YacO
[Lactobacillus casei W56]
Length = 280
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F N L+++ L D N+ + R+ADA GV V +
Sbjct: 104 VLLAMTPYAYATLDDLFKNAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGVIIPK 163
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + L+ R + T MD D
Sbjct: 164 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKTLKERSMWVFGT--AMDGQDYRKWDA 221
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 222 KGSTALVIGNEGKGISPGVAKLMDAMIAIPMVGHVQSLNASVAAGILMYQAFASR 276
>gi|254495332|ref|ZP_05108256.1| SpoU rRNA methylase [Polaribacter sp. MED152]
gi|85819686|gb|EAQ40843.1| SpoU rRNA methylase [Polaribacter sp. MED152]
Length = 248
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
L+++ LSD N A R+A+ GV + + S+ E S GA + I D
Sbjct: 100 LILDQLSDVRNFGAIIRTAECTGVNGIIIQKNGSAPVNAETIKTSAGAAFKMPICKVDHI 159
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
++ +L++ + D+ S+YD++++ P AI++G+E+RGV+ L + D + +
Sbjct: 160 KDALFILQASNIKTVAATEKTDS-SIYDVNFNQPIAIIMGSEHRGVNPSVLKMVDYKAKL 218
Query: 283 PMKGMVDSFNVSVAAGILMHHAVCDRA 309
P+ G ++S NVSVA G+ ++ V R+
Sbjct: 219 PLSGNIESLNVSVACGVFLYETVRQRS 245
>gi|424766335|ref|ZP_18193688.1| RNA methyltransferase, TrmH family [Enterococcus faecium TX1337RF]
gi|402411074|gb|EJV43454.1| RNA methyltransferase, TrmH family [Enterococcus faecium TX1337RF]
Length = 254
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKEISTFLVSDEVMDAVSDLPTPQGILAVMALTAEGTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++S ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLSKGTADIYSTKVLRSMQGSNYHLPVLQKDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|430877571|ref|ZP_19483940.1| RNA methyltransferase [Enterococcus faecium E1575]
gi|430557324|gb|ELA96790.1| RNA methyltransferase [Enterococcus faecium E1575]
Length = 254
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L + V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLADVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE GVS E LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGHGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|302391187|ref|YP_003827007.1| tRNA/rRNA methyltransferase SpoU [Acetohalobium arabaticum DSM
5501]
gi|302203264|gb|ADL11942.1| tRNA/rRNA methyltransferase (SpoU) [Acetohalobium arabaticum DSM
5501]
Length = 268
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ L+++ + D GN+ R+AD GV V ++ + +MG+ + + +
Sbjct: 118 LFLIIDRIQDPGNLGTILRTADGAGVDGVFLLKGTVDIYNLKTIRATMGSLFRVPVFGLN 177
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+P + ++L+ + ++ + Y++D++ PTA+V+GNE G E L L+D +
Sbjct: 178 SPSDLTDILQMKDIQMVAADIEAKD-YYYELDYNQPTALVIGNEGAGAQPETLKLADKKV 236
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDR 308
IP+ +DS N ++A+GI+M+ V R
Sbjct: 237 KIPLSEGIDSLNAAIASGIIMYEMVRQR 264
>gi|325103518|ref|YP_004273172.1| TrmH family RNA methyltransferase [Pedobacter saltans DSM 12145]
gi|324972366|gb|ADY51350.1| RNA methyltransferase, TrmH family, group 3 [Pedobacter saltans DSM
12145]
Length = 255
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ +SP ++ ++ V + + L+++ ++D N A R+A+ GV ++ +
Sbjct: 81 VIAFISPITYQKIEDIIPQVYEKGETPLILILDNITDVRNFGAIARTAECSGVHAIVIPK 140
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+++ + S GA + + D+ + L+ G +I + D + +Y D+
Sbjct: 141 RGAAQINPDAVKTSAGALYKVPVCRHDSLLQILRFLKDSGLQIVSCTEKTDDL-IYKPDY 199
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ PTA+++G E+ G+S E + SD IPM G ++S NVSV+AGI+++ AV R
Sbjct: 200 TVPTAVIMGAEDTGISFELIRNSDYLTKIPMAGEIESLNVSVSAGIILYEAVRQR 254
>gi|366087749|ref|ZP_09454234.1| TrmH family group 3 RNA methyltransferase [Lactobacillus zeae KCTC
3804]
Length = 260
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ A++PY + F + L+++ L D N+ + R+ADA GV + +
Sbjct: 84 VLLAMTPYAYASVDDLFQHAADKGEDPFFLLLDNLEDPHNLGSILRTADASGVHGIIIPK 143
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ VS GA +++ + + L+ RG + T MD D
Sbjct: 144 HRAVGLTSAVAKVSTGAIEYVPVARVTNLAQTIKQLKDRGMWVFGT--AMDGQDYRQWDA 201
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
TA+V+GNE +G+S L D +IPM G V S N SVAAGILM+ A R
Sbjct: 202 KGSTALVIGNEGKGISPGIAKLMDATIAIPMVGHVQSLNASVAAGILMYQAFASR 256
>gi|431033276|ref|ZP_19491122.1| RNA methyltransferase [Enterococcus faecium E1590]
gi|430564377|gb|ELB03561.1| RNA methyltransferase [Enterococcus faecium E1590]
Length = 254
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K ++L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKEISIFLVSDEVMDAVSDLPTPQGILAVMALTAEGTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|342733076|ref|YP_004771915.1| TrmH family RNA methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456444|ref|YP_005669042.1| RNA methyltransferase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417958885|ref|ZP_12601783.1| tRNA/rRNA methyltransferase [Candidatus Arthromitus sp. SFB-1]
gi|417962119|ref|ZP_12604395.1| hypothetical protein SFB2_265G1 [Candidatus Arthromitus sp. SFB-2]
gi|417965446|ref|ZP_12606971.1| Putative RNA methyltransferase [Candidatus Arthromitus sp. SFB-4]
gi|417968890|ref|ZP_12609862.1| SpoU rRNA Methylase family protein [Candidatus Arthromitus sp.
SFB-co]
gi|418015517|ref|ZP_12655082.1| RNA methyltransferase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418373335|ref|ZP_12965424.1| tRNA/rRNA methyltransferase (SpoU) domain protein [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342330531|dbj|BAK57173.1| RNA methyltransferase, TrmH family, group 3 [Candidatus Arthromitus
sp. SFB-mouse-Japan]
gi|345505852|gb|EGX28146.1| RNA methyltransferase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984790|dbj|BAK80466.1| RNA methyltransferase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380331104|gb|EIA22207.1| hypothetical protein SFB2_265G1 [Candidatus Arthromitus sp. SFB-2]
gi|380334724|gb|EIA25075.1| tRNA/rRNA methyltransferase [Candidatus Arthromitus sp. SFB-1]
gi|380337615|gb|EIA26644.1| Putative RNA methyltransferase [Candidatus Arthromitus sp. SFB-4]
gi|380338791|gb|EIA27646.1| SpoU rRNA Methylase family protein [Candidatus Arthromitus sp.
SFB-co]
gi|380341171|gb|EIA29664.1| tRNA/rRNA methyltransferase (SpoU) domain protein [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 246
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Query: 149 RFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM 208
++ + S + L+++ + D N+ + R+A+ +G+++V + S SM
Sbjct: 85 EIIDNIDTNSNDIVLILDSIQDPRNLGSILRTAEIMGIKNVIIPQKRSCGINSTVWKASM 144
Query: 209 GAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGV 268
G+ +L+I + + ++ G++I T + + S+ D++++ P +++GNE G+
Sbjct: 145 GSLAYLNICRINNIINVLSKFKNMGFKIVATSLDSTS-SLCDINYNFPLILIIGNEEMGI 203
Query: 269 SDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
++ L+ D++ IPM G +DSFNVSVAAGI+M+
Sbjct: 204 GEDLLNHCDIKIKIPMYGNIDSFNVSVAAGIIMYE 238
>gi|431586278|ref|ZP_19520793.1| RNA methyltransferase [Enterococcus faecium E1861]
gi|431737145|ref|ZP_19526100.1| RNA methyltransferase [Enterococcus faecium E1972]
gi|430593456|gb|ELB31442.1| RNA methyltransferase [Enterococcus faecium E1861]
gi|430599229|gb|ELB36941.1| RNA methyltransferase [Enterococcus faecium E1972]
Length = 254
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKGISTFLVSDEVMDAVSDLPTPQGILAVMALTAEGAPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQQDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|86143959|ref|ZP_01062327.1| putative tRNA:rRNA methyltransferase [Leeuwenhoekiella blandensis
MED217]
gi|85829666|gb|EAQ48129.1| putative tRNA:rRNA methyltransferase [Leeuwenhoekiella blandensis
MED217]
Length = 245
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 5/195 (2%)
Query: 115 WFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNV 174
+ P YK D + + +SP E + V+ + L+++ L+D N
Sbjct: 53 YVPQEKLYKLSD--QNHQGAIATISPIQFAEFEATAEAVLAASKPGLFLLLDQLTDVRNF 110
Query: 175 SATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGY 234
A R+A GV ++ + + + S GA + I D ++ L+ G
Sbjct: 111 GAIIRTAVCTGVDAIIIPKSGGAPVTDDTVKTSAGAIFNIPICKVDHIKDALFYLQGSGV 170
Query: 235 RI-ATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNV 293
++ A T D S+YD+D++ PTA+V+G+E +GV+ L L D + +PM G + S NV
Sbjct: 171 QVVAATEKTED--SIYDLDYTTPTALVMGSEGKGVTPGVLKLVDHKAKLPMAGTISSLNV 228
Query: 294 SVAAGILMHHAVCDR 308
SVA G ++ V R
Sbjct: 229 SVACGAFLYEVVRQR 243
>gi|294672913|ref|YP_003573529.1| TrmH family RNA methyltransferase [Prevotella ruminicola 23]
gi|294472688|gb|ADE82077.1| RNA methyltransferase, TrmH family [Prevotella ruminicola 23]
Length = 247
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 147 KERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDS-SKRYRENR- 204
KE + ++ + + +V+E + GN+ A RSA+A G+ ++ + CD + Y N
Sbjct: 85 KEHTLEKLQLKESPLIVVLESVEKPGNLGAILRSAEAAGIDAL--IVCDPLTDMYNPNVI 142
Query: 205 HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNE 264
S+G + + + +EC L+ G +I T + D+ YD D + TAIV+G E
Sbjct: 143 RASIGGVFCVPTAVCSS-QECIAFLKEHGIKILTAQL-QDSYEYYDYDMTQGTAIVMGTE 200
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+ G++++ +D IPM G +DS NVSV+A ILM+ AV R ++
Sbjct: 201 STGLTNQWREAADAHIRIPMLGRLDSLNVSVSAAILMYEAVRQRNSK 247
>gi|428173999|gb|EKX42898.1| hypothetical protein GUITHDRAFT_111265 [Guillardia theta CCMP2712]
Length = 249
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 152 NVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSV------HVVSC--DSSKRYREN 203
+V+ R+ + LV++ + D GN+S+ FR+ DALGVQ + H S+K+ R
Sbjct: 33 DVLSWRTDKIILVLDRIRDVGNISSIFRTCDALGVQVIWSILPPHYTGAFSSSTKKIRSK 92
Query: 204 -RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW-SCPT---A 258
R +S GA+++L + E +R G +I +T +G A+S+ + P A
Sbjct: 93 MRSISRGADRYLSQRFFQDEHELLKAIREEGRQIWSTDLGAGAVSLRSGEQVELPQEGIA 152
Query: 259 IVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
+V+G E GVS L S R IP G V S NV+VA +++
Sbjct: 153 LVMGEETAGVSQAILDASSKRVFIPTFGFVQSLNVAVATALVLQ 196
>gi|372267403|ref|ZP_09503451.1| rRNA methylase [Alteromonas sp. S89]
Length = 197
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC-----DSSKRYRENRHVS---M 208
R ++ V+E D N+ R+ +ALGV+ ++V D + RE + +S +
Sbjct: 19 RCKNLIAVLEYPMDMKNIGTVIRNVNALGVEKTYIVDPRNALPDDWQEMRERKSLSKPSV 78
Query: 209 GAEKWLDIELWDAPRECFNVLRSRGYR--IATTHV-GMDAISVYDMDWSCPT-AIVVGNE 264
A KW ++ +D+ EC L G+ + + HV G D +++ D++ P A+ GNE
Sbjct: 79 SAIKWSFVKRFDSTEECLAHLAKNGFTSIVTSPHVKGKDNFILHEADYTQPKLAVWFGNE 138
Query: 265 NRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+RGVSD A+ S SIPM GM++S N+ +GI+++ R
Sbjct: 139 SRGVSDLAVENSAFCVSIPMFGMIESLNLGTTSGIVLYEVTKQR 182
>gi|258515609|ref|YP_003191831.1| tRNA/rRNA methyltransferase SpoU [Desulfotomaculum acetoxidans DSM
771]
gi|257779314|gb|ACV63208.1| tRNA/rRNA methyltransferase (SpoU) [Desulfotomaculum acetoxidans
DSM 771]
Length = 266
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR-ENRHVSMGAEKWLDIELW 219
+ ++V+G+ D GN+ R++DA GV +V ++S + Y + +MG+ L + +
Sbjct: 118 LLVLVDGIQDPGNLGTIIRTSDAAGVDAV-ILSRGTVDLYNPKTLRATMGSLFHLPVIMA 176
Query: 220 DAPRECFNVLRSRGYRIATTHVGM--DAISVYDMDWSCPTAIVVGNENRGVSDEALSLSD 277
P + +L G R+ VGM D VY +D + P A+VVG+E GVS+ L
Sbjct: 177 GEPVQAAELLLQAGIRLV---VGMPQDCQPVYSVDLTGPVALVVGSEANGVSEGLKRLPA 233
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
+ +IPM G +S N ++AA I+++ AV R+
Sbjct: 234 IPVNIPMPGHAESLNAAIAAAIMLYEAVRQRSV 266
>gi|452949058|gb|EME54529.1| tRNA/rRNA methyltransferase [Amycolatopsis decaplanina DSM 44594]
Length = 271
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
V V+EG+ D N+ + FR+A ALGV + + + S YR + VSMG + +
Sbjct: 121 VLAVLEGIGDHENLGSLFRNAAALGVDGILLGAGCSDPLYRRSVRVSMGHVLRVPFATFG 180
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVSDEALSLSDL 278
+ +LR RG+RIA D++S+ + P A+++G E G++DEA++ +D+
Sbjct: 181 SWPGDLELLRQRGFRIAALTPRADSVSLRQLRDQTPEKIALMLGAEGAGLTDEAIAAADV 240
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHH 303
IPM VDS NV+ A I +
Sbjct: 241 AVRIPMPEGVDSLNVATAGAIAFYE 265
>gi|430838369|ref|ZP_19456315.1| RNA methyltransferase [Enterococcus faecium E0688]
gi|430491611|gb|ELA68063.1| RNA methyltransferase [Enterococcus faecium E0688]
Length = 254
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKEISTFLVSDEVMDAVSDLPTPQGILAVMALTAEGAPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSGNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|363897362|ref|ZP_09323901.1| hypothetical protein HMPREF9624_00463 [Oribacterium sp. ACB7]
gi|361958859|gb|EHL12156.1| hypothetical protein HMPREF9624_00463 [Oribacterium sp. ACB7]
Length = 217
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
L++E + D GN+ FR+A+A G+ + + + + +MG+ + + +
Sbjct: 72 LILEDIQDPGNLGTIFRTAEAAGISHIFMNKTCTDIFSPKAVRSTMGSLFRVSFSIHEDL 131
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
+L+ R RI H+ + + Y D+ CP+A ++GNE G+S+ LSD I
Sbjct: 132 ESICKMLKKRAVRIYAMHLSGENV-FYQEDFRCPSAFMLGNEGNGLSESLTKLSDQLIRI 190
Query: 283 PMKGMVDSFNVSVAAGILMHHAVCDR 308
PM+G ++S NV+ A ILM+ R
Sbjct: 191 PMQGQIESLNVATTASILMYEVYRQR 216
>gi|430860478|ref|ZP_19478077.1| RNA methyltransferase [Enterococcus faecium E1573]
gi|430551876|gb|ELA91626.1| RNA methyltransferase [Enterococcus faecium E1573]
Length = 254
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
L+++ + D GNV R+ADA G+ V ++ ++ Y SM + L
Sbjct: 112 LLLDNVQDPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDL 170
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
E V++ +G+ + T + +A ++ ++ + AI++GNE +GVS E LSL+D I
Sbjct: 171 AEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNVYI 230
Query: 283 PMKGMVDSFNVSVAAGILMHH 303
P+KG +S NV VAAGI+++H
Sbjct: 231 PIKGNAESLNVGVAAGIVLYH 251
>gi|261209460|ref|ZP_05923823.1| RNA methyltransferase [Enterococcus faecium TC 6]
gi|289566871|ref|ZP_06447279.1| RNA methyltransferase [Enterococcus faecium D344SRF]
gi|260076588|gb|EEW64352.1| RNA methyltransferase [Enterococcus faecium TC 6]
gi|289161320|gb|EFD09212.1| RNA methyltransferase [Enterococcus faecium D344SRF]
Length = 254
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LS +D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSSTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|257883080|ref|ZP_05662733.1| RNA methyltransferase [Enterococcus faecium 1,231,502]
gi|416135642|ref|ZP_11598539.1| Putative tRNA/rRNA methyltransferase [Enterococcus faecium E4452]
gi|424797252|ref|ZP_18222865.1| RNA methyltransferase, TrmH family [Enterococcus faecium S447]
gi|424858042|ref|ZP_18282096.1| RNA methyltransferase, TrmH family [Enterococcus faecium R499]
gi|424958254|ref|ZP_18372910.1| RNA methyltransferase, TrmH family [Enterococcus faecium R446]
gi|424961449|ref|ZP_18375892.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1986]
gi|424967876|ref|ZP_18381551.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1140]
gi|424995372|ref|ZP_18407255.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV168]
gi|424999412|ref|ZP_18411029.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV165]
gi|425001750|ref|ZP_18413238.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV161]
gi|425004443|ref|ZP_18415751.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV102]
gi|425011101|ref|ZP_18422018.1| RNA methyltransferase, TrmH family [Enterococcus faecium E422]
gi|425017206|ref|ZP_18427728.1| RNA methyltransferase, TrmH family [Enterococcus faecium C621]
gi|257818738|gb|EEV46066.1| RNA methyltransferase [Enterococcus faecium 1,231,502]
gi|364092114|gb|EHM34515.1| Putative tRNA/rRNA methyltransferase [Enterococcus faecium E4452]
gi|402921489|gb|EJX41933.1| RNA methyltransferase, TrmH family [Enterococcus faecium S447]
gi|402927428|gb|EJX47394.1| RNA methyltransferase, TrmH family [Enterococcus faecium R499]
gi|402941053|gb|EJX59812.1| RNA methyltransferase, TrmH family [Enterococcus faecium R446]
gi|402943686|gb|EJX62155.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1986]
gi|402953514|gb|EJX71228.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1140]
gi|402977476|gb|EJX93290.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV168]
gi|402978872|gb|EJX94582.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV165]
gi|402985447|gb|EJY00654.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV161]
gi|402989283|gb|EJY04218.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV102]
gi|402997956|gb|EJY12246.1| RNA methyltransferase, TrmH family [Enterococcus faecium E422]
gi|403004898|gb|EJY18657.1| RNA methyltransferase, TrmH family [Enterococcus faecium C621]
Length = 254
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L E V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLAEVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ + AI++GNE +GVS E LS +D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSSADQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|387791083|ref|YP_006256148.1| rRNA methylase [Solitalea canadensis DSM 3403]
gi|379653916|gb|AFD06972.1| rRNA methylase, putative, group 3 [Solitalea canadensis DSM 3403]
Length = 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV +SP + + + ++ + LV++ ++D N A R+A+ +GV +V V +
Sbjct: 78 VVAYISPIVYHKTEHIVPDIYAAGKTPLLLVLDRVTDVRNFGAIVRTAECMGVDAVIVPA 137
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
S++ + S GA + I ++ L+ G ++ D + + D+D+
Sbjct: 138 RGSAQVNPDAVKTSAGAIFRVPICREMKLKDTLEFLKDSGIQLVACTEKTDNV-LADVDY 196
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ PTAI++G+E G+S E + D + IPM G + SFNVSV+AGI+++ A+ R
Sbjct: 197 TGPTAIIMGSEEDGISPEYMKYCDAKAKIPMFGDIASFNVSVSAGIILYEAIRQR 251
>gi|293571651|ref|ZP_06682672.1| hypothetical tRNA/rRNA methyltransferase [Enterococcus faecium
E980]
gi|291608321|gb|EFF37622.1| hypothetical tRNA/rRNA methyltransferase [Enterococcus faecium
E980]
Length = 254
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKEISTFLVSDEVMDAVSDLPTPQGILAVMALTAEGAPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQQDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|431762344|ref|ZP_19550906.1| RNA methyltransferase [Enterococcus faecium E3548]
gi|430625036|gb|ELB61686.1| RNA methyltransferase [Enterococcus faecium E3548]
Length = 254
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKEISTFLVSDEVMDAVSDLPTPQGILAVMALTAEGTPEFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|409098555|ref|ZP_11218579.1| TrmH family RNA methyltransferase [Pedobacter agri PB92]
Length = 257
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 5/181 (2%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ +SP + ++ V + + LV++ ++D N+ A R+A +GV ++ V
Sbjct: 80 VIAVISPITYQNIEDIVPAVFEKGEVPLILVLDSVTDVRNMGAIARTAACVGVHAIVVPL 139
Query: 194 CDSSKRYRENRHVSMGAEKWLDI-ELWDAPRECFNVLRSRGYRI-ATTHVGMDAISVYDM 251
++++ + S GA + I + + C L+ G +I A T D I Y
Sbjct: 140 KNAAQINADAIKTSAGALFSIPICRHANLHKTCL-FLQDSGLQIVACTEKTSDLI--YTP 196
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D++ PTAIV+G+E+ G+S++ L ++D IPM G ++S NVSV+AG++++ AV R T
Sbjct: 197 DYTMPTAIVMGSEDEGISNDLLRVADHLAKIPMAGKIESLNVSVSAGVILYEAVRQRTTA 256
Query: 312 L 312
+
Sbjct: 257 I 257
>gi|149378386|ref|ZP_01896087.1| tRNA (guanosine-2'-O-)-methyltransferase [Marinobacter algicola
DG893]
gi|149357335|gb|EDM45856.1| tRNA (guanosine-2'-O-)-methyltransferase [Marinobacter algicola
DG893]
Length = 245
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R + R + ++ + + N+SA RS DA G+ ++HVV + +R
Sbjct: 1 MTPERLARIKQTLDTRQPDLSVLTDQVHKPRNLSAIIRSCDAFGLANMHVVW--PREGFR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R + G+ W+ + + L+ +G+++ + AI + D++ P +++
Sbjct: 59 AFRKTAGGSYNWVTTHTHPTMDDAVSELKGQGHKLYAAQLSDRAIDYREADFTVPCTVIM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
GNE GVS A +D IPM GMV+S NVS A I++ A R +L G
Sbjct: 119 GNEVDGVSHGAAEQADEHIVIPMMGMVESLNVSSACAIILSEA--QRQRKLAG 169
>gi|257886892|ref|ZP_05666545.1| RNA methyltransferase [Enterococcus faecium 1,141,733]
gi|257890478|ref|ZP_05670131.1| RNA methyltransferase [Enterococcus faecium 1,231,410]
gi|257893082|ref|ZP_05672735.1| RNA methyltransferase [Enterococcus faecium 1,231,408]
gi|260558938|ref|ZP_05831125.1| RNA methyltransferase [Enterococcus faecium C68]
gi|293559777|ref|ZP_06676297.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1162]
gi|293568626|ref|ZP_06679941.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1071]
gi|314950192|ref|ZP_07853477.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0082]
gi|383329257|ref|YP_005355141.1| RNA methyltransferase [Enterococcus faecium Aus0004]
gi|424791877|ref|ZP_18218178.1| RNA methyltransferase, TrmH family [Enterococcus faecium V689]
gi|424847654|ref|ZP_18272208.1| RNA methyltransferase, TrmH family [Enterococcus faecium R501]
gi|424954540|ref|ZP_18369435.1| RNA methyltransferase, TrmH family [Enterococcus faecium R494]
gi|424985305|ref|ZP_18397788.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV69]
gi|424987656|ref|ZP_18400023.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV38]
gi|424991501|ref|ZP_18403648.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV26]
gi|425008965|ref|ZP_18420011.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV1]
gi|425014831|ref|ZP_18425485.1| RNA methyltransferase, TrmH family [Enterococcus faecium E417]
gi|425040429|ref|ZP_18444902.1| RNA methyltransferase, TrmH family [Enterococcus faecium 513]
gi|431752242|ref|ZP_19540925.1| RNA methyltransferase [Enterococcus faecium E2620]
gi|431757086|ref|ZP_19545717.1| RNA methyltransferase [Enterococcus faecium E3083]
gi|431780946|ref|ZP_19569104.1| RNA methyltransferase [Enterococcus faecium E4389]
gi|257822946|gb|EEV49878.1| RNA methyltransferase [Enterococcus faecium 1,141,733]
gi|257826838|gb|EEV53464.1| RNA methyltransferase [Enterococcus faecium 1,231,410]
gi|257829461|gb|EEV56068.1| RNA methyltransferase [Enterococcus faecium 1,231,408]
gi|260075046|gb|EEW63361.1| RNA methyltransferase [Enterococcus faecium C68]
gi|291588586|gb|EFF20419.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1071]
gi|291606260|gb|EFF35674.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1162]
gi|313643502|gb|EFS08082.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0082]
gi|378938951|gb|AFC64023.1| RNA methyltransferase [Enterococcus faecium Aus0004]
gi|402918391|gb|EJX39088.1| RNA methyltransferase, TrmH family [Enterococcus faecium V689]
gi|402919002|gb|EJX39644.1| RNA methyltransferase, TrmH family [Enterococcus faecium R501]
gi|402936533|gb|EJX55704.1| RNA methyltransferase, TrmH family [Enterococcus faecium R494]
gi|402966221|gb|EJX82875.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV69]
gi|402973892|gb|EJX89977.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV38]
gi|402976653|gb|EJX92527.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV26]
gi|402991029|gb|EJY05861.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV1]
gi|402997598|gb|EJY11914.1| RNA methyltransferase, TrmH family [Enterococcus faecium E417]
gi|403012880|gb|EJY26047.1| RNA methyltransferase, TrmH family [Enterococcus faecium 513]
gi|430613733|gb|ELB50732.1| RNA methyltransferase [Enterococcus faecium E2620]
gi|430619375|gb|ELB56202.1| RNA methyltransferase [Enterococcus faecium E3083]
gi|430638468|gb|ELB74403.1| RNA methyltransferase [Enterococcus faecium E4389]
Length = 254
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKEISTFLVSDEVMDAVSDLPTPQGILAVMALTAEGTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|114319697|ref|YP_741380.1| tRNA guanosine-2'-O-methyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226091|gb|ABI55890.1| tRNA guanosine-2'-O-methyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 220
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 146 RKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRH 205
R R ++ R + ++++ + N+SA R+ DA+GV H VS + + +R
Sbjct: 5 RLHRMRQTLERRQPDLQVLLDQVHKPHNLSAILRTCDAVGVPRAHAVS--RHQDFTVHRA 62
Query: 206 VSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
S G +W+ +E ++ +G ++ H+ A+ +D++ P +++G E
Sbjct: 63 ASSGTGQWVAVETHADLPAAVRAVQGQGMKVYAAHLSEQAVDYRQVDYTKPCCLLLGAEK 122
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
GVS+E +L+D IPM G+ S NVSVAA +++ A
Sbjct: 123 EGVSEEGAALADGHVIIPMFGLGASLNVSVAAAVILFEA 161
>gi|335046268|ref|ZP_08539291.1| RNA methyltransferase, TrmH family [Oribacterium sp. oral taxon 108
str. F0425]
gi|333760054|gb|EGL37611.1| RNA methyltransferase, TrmH family [Oribacterium sp. oral taxon 108
str. F0425]
Length = 217
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
L++E + D GN+ FR+A+A G+ + + + + +MG+ + + +
Sbjct: 72 LILEDIQDPGNLGTIFRTAEAAGISHIFMNKTCTDIFSPKAVRSTMGSLFRVSFSIHEDL 131
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
+L+ R RI H+ + + Y D+ CP+A + GNE G+S+ LSD I
Sbjct: 132 ESICKMLKKRAVRIYAMHLSGENV-FYQEDFRCPSAFMFGNEGNGLSESLTKLSDQLIRI 190
Query: 283 PMKGMVDSFNVSVAAGILMHHAVCDR 308
PM+G ++S NV+ A ILM+ R
Sbjct: 191 PMQGQIESLNVATTASILMYEVYRQR 216
>gi|425061762|ref|ZP_18464967.1| RNA methyltransferase, TrmH family, partial [Enterococcus faecium
503]
gi|403040582|gb|EJY51649.1| RNA methyltransferase, TrmH family, partial [Enterococcus faecium
503]
Length = 268
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 73 KEWGDWLAANKEISTFLVSDEVMDAVSDLPTPQGILAVMALTAEGTPDFSGGWLLLDNVQ 132
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 133 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLTEVIPLM 191
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 192 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 251
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 252 SLNVGVAAGIVLYH 265
>gi|420264027|ref|ZP_14766662.1| TrmH family RNA methyltransferase [Enterococcus sp. C1]
gi|394768926|gb|EJF48803.1| TrmH family RNA methyltransferase [Enterococcus sp. C1]
Length = 253
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 119 LDRYKCGDVYLSSSEVVEALSP-------YLMEERKERFVNVVKNRSYSVCLVVEGLSDF 171
LD Y+ + YL + E+ LS + + E++E+ + + L+++ + D
Sbjct: 65 LDDYQE-ESYLITEEIAAMLSDLPTPQGIFAVVEKQEQNLQTLTGN----WLILDNVQDP 119
Query: 172 GNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRS 231
GNV R+ADA G V + ++ Y SM + L A LRS
Sbjct: 120 GNVGTMIRTADAAGFSGV-FLGEGTADLYSTKVLRSMQGSNYHLPILEGAIPPFLKQLRS 178
Query: 232 RGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSF 291
G I T + +A+ ++ TA ++GNE +GV E L+L+D IP+ G +S
Sbjct: 179 AGVTIYGTELNKEAVPYTELPKEQTTAFILGNEGQGVHPELLALTDKNVYIPLYGQAESL 238
Query: 292 NVSVAAGILMHHAV 305
NV++AAGILM+ +V
Sbjct: 239 NVAIAAGILMYFSV 252
>gi|289579164|ref|YP_003477791.1| TrmH family RNA methyltransferase [Thermoanaerobacter italicus Ab9]
gi|289528877|gb|ADD03229.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
italicus Ab9]
Length = 249
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
VE L Y E++KE+ L+++ ++D N+ A RSA+A GV + +
Sbjct: 84 VEDLLEY-AEQKKEK----------PFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKR 132
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ S GA +++ I L+ RG I T V S ++D+
Sbjct: 133 RAVGVNATVVKTSAGAVEYMKIAKVSNINNTIRNLKERGLWIIGTDVN-GGKSFEEIDYD 191
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
P A+V+GNE +GVS L D IPMKG ++S N SVAA IL++ V R ++
Sbjct: 192 FPVALVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVVSKRKDKV 249
>gi|227551945|ref|ZP_03981994.1| TrmH family RNA methyltransferase [Enterococcus faecium TX1330]
gi|257895463|ref|ZP_05675116.1| RNA methyltransferase [Enterococcus faecium Com12]
gi|293378329|ref|ZP_06624498.1| RNA methyltransferase, TrmH family [Enterococcus faecium PC4.1]
gi|227178850|gb|EEI59822.1| TrmH family RNA methyltransferase [Enterococcus faecium TX1330]
gi|257832028|gb|EEV58449.1| RNA methyltransferase [Enterococcus faecium Com12]
gi|292643193|gb|EFF61334.1| RNA methyltransferase, TrmH family [Enterococcus faecium PC4.1]
Length = 254
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKEISTFLVSDEVMDAVSDLPAPQGILAVMALTAEGAPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|168188126|ref|ZP_02622761.1| rRNA methylase [Clostridium botulinum C str. Eklund]
gi|169294044|gb|EDS76177.1| rRNA methylase [Clostridium botulinum C str. Eklund]
Length = 261
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
++ + + D GN+ RSA+A G V V + +MG+ + I + D
Sbjct: 115 VLADKVQDPGNMGTIIRSANASGALGVIVTKGTVDIYNDKTLRSTMGSIFKIPI-IEDNE 173
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
E NVL+S+G+++ + + + + +D+D + I VGNE GVSDE SL D + I
Sbjct: 174 FEIINVLKSKGFKLIVSSLDTEN-NFFDIDLTGKVIICVGNEGNGVSDEVYSLGDEKVKI 232
Query: 283 PMKGMVDSFNVSVAAGILMHHAV 305
PM G +S N VAA I+M+ V
Sbjct: 233 PMPGNAESLNAGVAASIMMYEVV 255
>gi|430947038|ref|ZP_19485818.1| RNA methyltransferase [Enterococcus faecium E1576]
gi|430558435|gb|ELA97854.1| RNA methyltransferase [Enterococcus faecium E1576]
Length = 254
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV+ A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAVNKEISTFLVSDEVMTAMSDLPTPQGILAVMTLTSEDTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA G+ V ++ ++ Y SM + L + V+
Sbjct: 119 DPGNVGTMIRTADAFGMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLADVIPVM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A + ++ + AI++GNE +GVS + LSL+D IPMKG +
Sbjct: 178 KGKGFTVYGTELNEEAHELDKVEKTEDFAIIMGNEGQGVSQKILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|375013599|ref|YP_004990587.1| rRNA methylase [Owenweeksia hongkongensis DSM 17368]
gi|359349523|gb|AEV33942.1| rRNA methylase [Owenweeksia hongkongensis DSM 17368]
Length = 175
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
E F KN + LV++ + NV + FR++DA V+ +H+ ++ +RE +
Sbjct: 15 EEFQEAPKN---PIVLVLDNVRSLLNVGSVFRTSDAFRVEELHLCGLTATPPHREMNKTA 71
Query: 208 MGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV--YDMDWSCPTAIVVGNEN 265
+GA + + + + L+ +GY + AIS+ + + A++ GNE
Sbjct: 72 LGATESVSWRHFVETSDSLKDLKEKGYTLIAIEQTSGAISLEQFPFEQHDKVALIFGNEV 131
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+GVS+EAL+L D IP G S N+SV+AGI + A
Sbjct: 132 KGVSNEALALCDFAIEIPQFGTKHSLNISVSAGIALWQA 170
>gi|386846885|ref|YP_006264898.1| rRNA methylase [Actinoplanes sp. SE50/110]
gi|359834389|gb|AEV82830.1| rRNA methylase [Actinoplanes sp. SE50/110]
Length = 264
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMG---AEKWLDIELWD 220
V+EGL+ N+ A FRSA ALG+ +V + + YR VSMG A + E W
Sbjct: 120 VLEGLNTHTNLGALFRSAAALGIDAVVLSPSCADPLYRRAVRVSMGEVFAIPYTKTETWP 179
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVSDEALSLSDL 278
P +R G+ + DA+++ D+ + A+++G E G++ AL SD+
Sbjct: 180 EP---LTTIRDAGFTLLAMTPAPDAVALRDLTAAQRDRPALLLGAEGPGLTPAALGASDV 236
Query: 279 RCSIPMKGMVDSFNVSVAAGILMH 302
R +IPM VDS NV+ AA I +
Sbjct: 237 RVAIPMHNNVDSLNVATAAAIAFY 260
>gi|428179016|gb|EKX47889.1| hypothetical protein GUITHDRAFT_151995, partial [Guillardia theta
CCMP2712]
Length = 164
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRE-- 202
+R + V NR +V++G+ D GN +A R+A+ALG+ +HV+ K R
Sbjct: 11 QRLAKLQRAVLNRMSGFRIVIDGVQDPGNHAAVMRTAEALGLLDLHVIRYVRDKPQRRTS 70
Query: 203 -NRHVSMGAEKWLDIELWDAPRECFNVLRSRGY--------RIATTHVGMDAISVYDMDW 253
++ ++ G E+WL I + +C + LR G+ R T + + + ++D+
Sbjct: 71 LSKSITKGGEQWLRIHFHNTAGDCLHHLRQEGFSQILAAKPRNPQTDTARNPVELSEVDF 130
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGM 287
TA+++GNE GVS E L D I M G+
Sbjct: 131 GKKTALIIGNEKNGVSSEMSELCDGDFCIDMHGL 164
>gi|325954534|ref|YP_004238194.1| tRNA/rRNA methyltransferase SpoU [Weeksella virosa DSM 16922]
gi|323437152|gb|ADX67616.1| tRNA/rRNA methyltransferase (SpoU) [Weeksella virosa DSM 16922]
Length = 257
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
++ LV+E + GN+ A R+AD V +V V CD + + + ++
Sbjct: 109 ALILVLEAVEKPGNLGAILRTADGAKVDAVIV--CDETVDFYNPNVIRSSVGTLFTNQIA 166
Query: 220 DAPRE-CFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
+E N L++ +I +T + + S+Y+MD+S +AIV+G E G+SD SD+
Sbjct: 167 SGSKEEVLNFLKNNNIQIVSTFLRDNTKSLYEMDFSSSSAIVLGTEATGLSDFWADESDV 226
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
IPM G VDS NVS AA I ++ AV R
Sbjct: 227 LIKIPMLGKVDSLNVSNAAAICVYEAVRQR 256
>gi|255526051|ref|ZP_05392974.1| tRNA/rRNA methyltransferase (SpoU) [Clostridium carboxidivorans P7]
gi|255510237|gb|EET86554.1| tRNA/rRNA methyltransferase (SpoU) [Clostridium carboxidivorans P7]
Length = 260
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 19/193 (9%)
Query: 123 KCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSV------CLVVEGLSDFGNVSA 176
K +Y S +V++ LS E + VV N+ +V ++V+ + D GN+
Sbjct: 72 KSTKIYWVSEQVLKLLSD---TETPQGITAVVDNKELNVENKEGFYVLVDKVQDPGNMGT 128
Query: 177 TFRSA---DALGVQSVHVVSCDSSKRYRENR-HVSMGAEKWLDIELWDAPRECFNVLRSR 232
R+A ALGV +++ + Y E +MG+ + + + D N L+ +
Sbjct: 129 IIRTAHASKALGV----IITKGTVDIYNEKTLRSTMGSIFHVPV-IQDNDLNKVNFLKEK 183
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G+ + + + D + YD+D I VGNE G+SDE +++D++ IPM G +S N
Sbjct: 184 GFNLVASSLNTDK-NFYDVDLKGKKIIAVGNEGSGISDEIYNMADIKVKIPMPGGAESLN 242
Query: 293 VSVAAGILMHHAV 305
VSVAAG++M +
Sbjct: 243 VSVAAGVMMFEVI 255
>gi|300770796|ref|ZP_07080674.1| RNA methyltransferase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762353|gb|EFK59171.1| RNA methyltransferase [Sphingobacterium spiritivorum ATCC 33861]
Length = 259
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 1/175 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ +SP ++ ++ + + + L+++G++D N+ A R+A+ GV ++ V
Sbjct: 82 VIAVISPITYQKIEDLIPEIYEKGETPLILMLDGVTDVRNLGAIARTAECSGVHAIIVPK 141
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
S++ + S GA + + D + L G ++ + + S+Y +D+
Sbjct: 142 KGSAEINPDAIKTSAGALYKIPVCRHDNLGKVGKFLIDSGIQLVVSTEKTEE-SIYSVDY 200
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ PT I++G E+ GVSD+ + +SD IPM G + S NVSV+AG++++ A+ R
Sbjct: 201 TAPTCIIMGAEDIGVSDDLIRISDHLAKIPMFGEIGSLNVSVSAGVVLYEAIRQR 255
>gi|227538387|ref|ZP_03968436.1| possible tRNA/rRNA methyltransferase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227241769|gb|EEI91784.1| possible tRNA/rRNA methyltransferase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 259
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 1/175 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ +SP ++ ++ + + + L+++G++D N+ A R+A+ GV ++ V
Sbjct: 82 VIAVISPITYQKIEDLIPEIYEKGETPLILMLDGVTDVRNLGAIARTAECSGVHAIIVPK 141
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
S++ + S GA + + D + L G ++ + + S+Y +D+
Sbjct: 142 KGSAEINPDAIKTSAGALYKIPVCRHDNLGKVGKFLIDSGIQLVVSTEKTEE-SIYSVDY 200
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ PT I++G E+ GVSD+ + +SD IPM G + S NVSV+AG++++ A+ R
Sbjct: 201 TAPTCIIMGAEDVGVSDDLIRISDHLAKIPMFGEIGSLNVSVSAGVVLYEAIRQR 255
>gi|354604368|ref|ZP_09022359.1| RNA methyltransferase, TrmH family, group 3 [Alistipes indistinctus
YIT 12060]
gi|353348135|gb|EHB92409.1| RNA methyltransferase, TrmH family, group 3 [Alistipes indistinctus
YIT 12060]
Length = 244
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ ++ +G++D N A RSA+ GV + + +S+ + S GA + +
Sbjct: 96 LLVIFDGVTDVRNFGAIARSAECAGVHGLIMPVKNSAPVNANSMKTSAGALSIIPVSRVG 155
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+ R +L++ G +I + + +Y D + PTA+V+G+E+ G+S E L + D++
Sbjct: 156 SIRNTIRILQNAGLQIVAASEKSE-LPLYKADLNKPTALVLGSEDTGISKEVLKMCDVQL 214
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
+IP+KG ++S NV AA +++ AV R+
Sbjct: 215 AIPLKGTIESLNVGAAAAVMLFEAVRQRS 243
>gi|153955807|ref|YP_001396572.1| methyltransferase [Clostridium kluyveri DSM 555]
gi|219856174|ref|YP_002473296.1| hypothetical protein CKR_2831 [Clostridium kluyveri NBRC 12016]
gi|146348665|gb|EDK35201.1| Predicted methyltransferase [Clostridium kluyveri DSM 555]
gi|219569898|dbj|BAH07882.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 266
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 108 ESLSNKRWFPYLDR---YKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSV--- 161
E +N+ +L+R KC +Y + E++ ++S E + + VVKN+ ++
Sbjct: 55 EYFTNREERFFLERNNKVKC-PIYFVTDEILRSIS---CTENPQGIIAVVKNKELNIKDE 110
Query: 162 ---CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
++ + + D GN+ RSA A G + + +MG+ ++ I +
Sbjct: 111 QGFYILADRIQDPGNMGTIIRSAHASGALGIITTKGTVDVYNEKTLRATMGSIFYIPI-I 169
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
D E + LR G+++ ++ + D I+ YDMD I +GNE G+ + +SD+
Sbjct: 170 QDENLEKVSTLRQMGFKLISSSLDSD-INFYDMDLRGKIIIAIGNEGNGLLQDVKKISDI 228
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHAV 305
+IPM G +S N +VAA I+M V
Sbjct: 229 EVNIPMPGNAESLNAAVAASIMMFEVV 255
>gi|374287705|ref|YP_005034790.1| putative SpoU rRNA methylase family protein [Bacteriovorax marinus
SJ]
gi|301166246|emb|CBW25821.1| putative SpoU rRNA methylase family protein [Bacteriovorax marinus
SJ]
Length = 268
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ LV++ L NV + FR+A+A+G++ VH+ + + ++G +KW+ W+
Sbjct: 117 IHLVLDNLRSSFNVGSLFRTAEAIGIKEVHLCGYTPTPENSKTAKSALGTDKWIKWSYWE 176
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+ +C + L+ RG I +A ++ ++ AIV+GNE G+++ L+ SD
Sbjct: 177 SSLDCIDALKERGASIYAFETEKNAKALEEVREIRECAIVLGNERYGLNESVLNRSDEIL 236
Query: 281 SIPMKGMVDSFNVSVAAGILMHH 303
I + G +S NV I M+H
Sbjct: 237 KIRLDGKKNSLNVGTCGAIAMYH 259
>gi|227530112|ref|ZP_03960161.1| tRNA/rRNA methyltransferase (SpoU) [Lactobacillus vaginalis ATCC
49540]
gi|227349968|gb|EEJ40259.1| tRNA/rRNA methyltransferase (SpoU) [Lactobacillus vaginalis ATCC
49540]
Length = 288
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 127 VYLSSSEVVEALSPYLMEERKERFVNVVKN-----------RSYSVCLVVEGLSDFGNVS 175
+Y+ SSE++ LS Y + ++ VK +++ V+E + + N+
Sbjct: 89 IYVVSSELLSQLSGYNLLRGALAAMHRVKRPDLASFLATMPKAHPRIAVLESVVNPTNIG 148
Query: 176 ATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE-----KWLDIELWDAPRECFNVLR 230
A FRSA ALG+ V V S + YR VSMG ++D +LW A E ++L
Sbjct: 149 AIFRSAAALGIDGVVVTSDSADPFYRRASRVSMGTVFQVPWTYVDAKLWQA--EGISLLH 206
Query: 231 SRGYRIATTHVGMDAISVYD--MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMV 288
GY+ A + + +++ D +D AI++G+E G+ ++ ++ SD IPM V
Sbjct: 207 RLGYKTAAMALRHNTVNIDDPQLDQVDKLAIILGSEGPGLREKTIAQSDFTIKIPMAPGV 266
Query: 289 DSFNVSVAAGI 299
DS NV+ A+ +
Sbjct: 267 DSLNVAAASAL 277
>gi|296187098|ref|ZP_06855496.1| RNA methyltransferase, TrmH family [Clostridium carboxidivorans P7]
gi|296048292|gb|EFG87728.1| RNA methyltransferase, TrmH family [Clostridium carboxidivorans P7]
Length = 213
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 19/193 (9%)
Query: 123 KCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSV------CLVVEGLSDFGNVSA 176
K +Y S +V++ LS E + VV N+ +V ++V+ + D GN+
Sbjct: 25 KSTKIYWVSEQVLKLLSD---TETPQGITAVVDNKELNVENKEGFYVLVDKVQDPGNMGT 81
Query: 177 TFRSA---DALGVQSVHVVSCDSSKRYRENR-HVSMGAEKWLDIELWDAPRECFNVLRSR 232
R+A ALGV +++ + Y E +MG+ + + + D N L+ +
Sbjct: 82 IIRTAHASKALGV----IITKGTVDIYNEKTLRSTMGSIFHVPV-IQDNDLNKVNFLKEK 136
Query: 233 GYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFN 292
G+ + + + D + YD+D I VGNE G+SDE +++D++ IPM G +S N
Sbjct: 137 GFNLVASSLNTDK-NFYDVDLKGKKIIAVGNEGSGISDEIYNMADIKVKIPMPGGAESLN 195
Query: 293 VSVAAGILMHHAV 305
VSVAAG++M +
Sbjct: 196 VSVAAGVMMFEVI 208
>gi|408675273|ref|YP_006875021.1| RNA methyltransferase, TrmH family, group 3 [Emticicia
oligotrophica DSM 17448]
gi|387856897|gb|AFK04994.1| RNA methyltransferase, TrmH family, group 3 [Emticicia
oligotrophica DSM 17448]
Length = 286
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ LV++ ++D N A R+A+ GV ++ V + +++ + S+GA L + +
Sbjct: 136 LLLVLDRITDVRNFGAIARTAECAGVNAIVVPARGAAQVNADAMKTSVGALNHLPVCREN 195
Query: 221 APRECFNVLRSRGYRI-ATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ + + L+ G ++ A T D + Y++D++ PTAI++G+E G+SD L +D
Sbjct: 196 SLSQVVSELQQSGIQVVACTEKANDEL--YEIDFTLPTAILMGSEEDGISDNLLEQADFA 253
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
IPM G + S NVSVA I+++ AV R
Sbjct: 254 TKIPMMGKIGSLNVSVATAIILYEAVRQR 282
>gi|333373150|ref|ZP_08465066.1| RNA methyltransferase [Desmospora sp. 8437]
gi|332970729|gb|EGK09709.1| RNA methyltransferase [Desmospora sp. 8437]
Length = 247
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Query: 119 LDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATF 178
LDR G L+ V P+ E +E F + L+++G+ D N+ +
Sbjct: 60 LDRVAAG---LNHQGVAAQAEPWRYAELEELFQRAEERDEPPFILLLDGIEDPHNLGSIL 116
Query: 179 RSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIAT 238
R+ADA GV V + ++ S GA + + + + L+ RG +
Sbjct: 117 RTADASGVHGVVIPKRRAAGLTPTVAKTSAGAVEHVPVVRVTNLNRTADELKERGVWLVA 176
Query: 239 THVGMDAISVYD-MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAA 297
DA + YD MD+S P A+V+GNE +GVS D +PMKG V S N SVAA
Sbjct: 177 GDA--DASARYDEMDYSLPVALVIGNEGKGVSRRLKEKCDFTVGLPMKGAVSSLNASVAA 234
Query: 298 GILMHHAVCDR 308
+LM+ + R
Sbjct: 235 ALLMYEVLRGR 245
>gi|213855785|ref|ZP_03384025.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 179
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 199 RYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTA 258
R R + G+ W+ ++ + L+ RG +I TH+ A+ ++D++ PT
Sbjct: 6 RMRTMASAAAGSNSWVQVKTHRTIDDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTC 65
Query: 259 IVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCN 316
I++G E G++ EAL L+D IPM GMV S NVSVA+ ++++ A R A + N
Sbjct: 66 ILMGQEKTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLREN 125
Query: 317 GDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
L +E+Q LL E ++ + AKRK
Sbjct: 126 SMLPEDEQQRLLFE-------GGYPVLAKVAKRK 152
>gi|163752931|ref|ZP_02160055.1| putative tRNA:rRNA methyltransferase [Kordia algicida OT-1]
gi|161326663|gb|EDP97988.1| putative tRNA:rRNA methyltransferase [Kordia algicida OT-1]
Length = 246
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ +SP + +NV+++ L+++ LSD N A R+A+ GV + +
Sbjct: 71 VIALISPIEFHDLDTLVLNVIESGRVPKFLILDQLSDVRNFGAIIRTAECTGVDGIIIQK 130
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
+ + S GA + I D ++ L+S G +I + ++YD+D+
Sbjct: 131 KGGAPVNADAVKTSAGAIFKMPICKVDHIKDAIYHLQSSGVQIVAATEKTEN-TLYDVDF 189
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ P AIV+G+E +GVS L + D + +PM G + S NVSVA G ++ V R
Sbjct: 190 TIPVAIVMGSEGKGVSPSILKIVDHQAKLPMLGEIASLNVSVACGAFLYEIVRQR 244
>gi|333370255|ref|ZP_08462269.1| TrmH family RNA methyltransferase [Desmospora sp. 8437]
gi|332978195|gb|EGK14927.1| TrmH family RNA methyltransferase [Desmospora sp. 8437]
Length = 263
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 20/225 (8%)
Query: 96 RSCMVND-GVGSMESLSNKRWFPYLDRYKCGDVYLSS-SEVVEALSP------YLMEERK 147
RS +V+D G+ +E LS YLD +Y S+ +++V+ +P ++ E K
Sbjct: 51 RSVIVSDEGIRGLEDLS------YLDGVSVYALYPSTFAQLVDTQTPQGIAAEVVVPENK 104
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
E + + R L+++ + D GN+ R+A+A GV V + + + +
Sbjct: 105 EGY----RIRGEEPVLLLDAIRDPGNLGTILRTAEAAGVGDVWLGAGTVDPFNPKVVRSA 160
Query: 208 MGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRG 267
MG+ I D RE L+ +GY + T + + +D + TAI++GNE +G
Sbjct: 161 MGSLFRTRIRRVDL-REAIPELKKQGYWVVGTSPRAER-AHFDCHYPKQTAILLGNEGKG 218
Query: 268 VSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
+S E SL D R IPM G V+S NVSV AGIL+ + + T +
Sbjct: 219 ISAEIDSLVDDRVKIPMPGQVESLNVSVTAGILLFELLRQQWTEI 263
>gi|116670673|ref|YP_831606.1| tRNA/rRNA methyltransferase SpoU [Arthrobacter sp. FB24]
gi|116610782|gb|ABK03506.1| tRNA/rRNA methyltransferase (SpoU) [Arthrobacter sp. FB24]
Length = 269
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 27/207 (13%)
Query: 113 KRWFPYLD----RYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCL----- 163
++W LD ++ VY+ S+ ++E ++ + + R R V L
Sbjct: 61 EKWLEDLDDVFEQFPDVPVYIGSAALLEDITGFHLH----RGAMAAMQRPSPVPLPGLLA 116
Query: 164 ------VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE---KWL 214
V+E + D NV A FRSA ALGV +V V YR + VSMG W
Sbjct: 117 NARRVAVLEDIVDHTNVGAIFRSAAALGVDAVLVSPRCGDPLYRRSVRVSMGTVFQVPWA 176
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC--PTAIVVGNENRGVSDEA 272
+E W VLR +G+ +A + DA+ V ++ A+V+G E G+S E
Sbjct: 177 RLESWPG---DLAVLREQGFTVAAMELTDDAVDVDELAARNLDKLALVLGTEGAGMSPET 233
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGI 299
LS DL IPM+ VDS NV+ A+ +
Sbjct: 234 LSAVDLAVRIPMRAGVDSLNVAAASAV 260
>gi|121534244|ref|ZP_01666069.1| tRNA/rRNA methyltransferase (SpoU) [Thermosinus carboxydivorans
Nor1]
gi|121307347|gb|EAX48264.1| tRNA/rRNA methyltransferase (SpoU) [Thermosinus carboxydivorans
Nor1]
Length = 270
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 105 GSMESLSNK--RWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC 162
++E L+ K R FP D +VY ++ + + E+K + +++ +
Sbjct: 66 ATLEILAAKGCRIFPVAD-----NVYAKITDTEQPQGILCVMEKKRYTFDDLQSSDRELI 120
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
+V++ + D GNV R+ADA G V + + + +MG+ L + A
Sbjct: 121 VVLDNVQDPGNVGTVVRTADAAGCCGVILTKGCADLFSGKTVRATMGSLFHLPVITGVAE 180
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVY-DMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
+E L +G R+ T +D+ S+Y D+D P AIV GNE GVS L +D R
Sbjct: 181 QEVAAFLERQGIRLLAT--ALDSSSLYHDVDLRSPVAIVFGNEGAGVSKVILEKADERLY 238
Query: 282 IPMKGMVDSFNVSVAAGILMHHA 304
IP+ G +S NV+VAA ++++ A
Sbjct: 239 IPLYGRAESLNVAVAAAVILYEA 261
>gi|259046651|ref|ZP_05737052.1| TrmH family RNA methyltransferase [Granulicatella adiacens ATCC
49175]
gi|259036816|gb|EEW38071.1| TrmH family RNA methyltransferase [Granulicatella adiacens ATCC
49175]
Length = 256
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
+V++ + D GN+ R+ADA G +V V+ + Y + SM + I ++ A
Sbjct: 111 IVLDAVQDPGNLGTIVRTADAAGFDAV-VLGTGTVDLYNDKVLRSMQGSHF-HIPVFQAN 168
Query: 223 -RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
+E +L+ +G ++A T + D+ + + AIVVGNE +GVSD+ + L+D+ +
Sbjct: 169 LQEYLPILKEKGVQVAVTALHRDSKDYSVLQGATDVAIVVGNEGQGVSDDVIDLADVVVT 228
Query: 282 IPMKGMVDSFNVSVAAGILMH 302
IP+ G +S NVS+A+ +LM+
Sbjct: 229 IPIFGKAESLNVSIASALLMY 249
>gi|406908514|gb|EKD48997.1| tRNA/rRNA methyltransferase (SpoU), partial [uncultured bacterium]
Length = 128
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
+H++ SS +R V+ GA KW+D+ C + L+ +GYRI T ++
Sbjct: 1 MHII--QSSDAFRALNTVAKGASKWVDLYPHKTTASCISQLKQQGYRIVATTPHERGYTL 58
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ + TA++ G E G+SDEA++L+D +IPM G +SFN+SV+A I ++ D
Sbjct: 59 SELPVTQKTALLFGTEITGLSDEAIALADDFVTIPMFGFTESFNISVSAAICLY----DF 114
Query: 309 ATRL 312
TRL
Sbjct: 115 ITRL 118
>gi|359777084|ref|ZP_09280380.1| RNA methyltransferase [Arthrobacter globiformis NBRC 12137]
gi|359305681|dbj|GAB14209.1| RNA methyltransferase [Arthrobacter globiformis NBRC 12137]
Length = 269
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 27/207 (13%)
Query: 113 KRWFPYL----DRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCL----- 163
++W P L ++Y Y+ S+ ++E ++ + + R +R V L
Sbjct: 61 EKWLPDLADIFEQYPDVPAYIGSAGLLEEITGFHLH----RGAMAAMHRPAPVPLPELVA 116
Query: 164 ------VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA---EKWL 214
V+E + D NV A FRSA AL V +V V YR + VSMG W
Sbjct: 117 GARRVAVLEDIVDHTNVGAIFRSAAALDVDAVLVSPRCGDPLYRRSVRVSMGTVFQVPWA 176
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVSDEA 272
++ W P++ +L+ +G+ +A + DA+ + ++ P A+V+G E G+S E
Sbjct: 177 RLDSW--PQD-LTLLKEQGFTVAAMELTADAVDLDELAARNPERLALVLGTEGAGMSAET 233
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGI 299
L+ DL IPM+ VDS NV+ A+ +
Sbjct: 234 LAAVDLAVKIPMRAGVDSLNVAAASAV 260
>gi|281491073|ref|YP_003353053.1| 23S rRNA methyltransferase [Lactococcus lactis subsp. lactis KF147]
gi|281374831|gb|ADA64351.1| 23S rRNA methyltransferase [Lactococcus lactis subsp. lactis KF147]
Length = 252
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 127 VYLSSSEVVEAL----SPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSAD 182
V L S EV+++L SP + + V+ + S + L++E + D GNV R+AD
Sbjct: 74 VNLVSKEVLKSLADSESPQGLIAEVTKIEEVI-DFSAAKFLLLENVQDPGNVGTMIRTAD 132
Query: 183 ALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVG 242
A G +V ++ +++ Y SM + + A +CF L+ G I TT +
Sbjct: 133 AAGFSAV-ILLGETADIYSPKVMRSMQGSNFHLPLVRMAKEDCFAQLKKAGISILTTTLS 191
Query: 243 MDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
+++S Y + A+++GNE GVSDEA+ +D I M G +S NV+VAAGILM
Sbjct: 192 ANSVS-YKIINEPHFALIMGNEGAGVSDEAVKAADKLVHIDMPGQAESLNVAVAAGILM 249
>gi|315604571|ref|ZP_07879634.1| TrmH family RNA methyltransferase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313583|gb|EFU61637.1| TrmH family RNA methyltransferase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 289
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 44/240 (18%)
Query: 110 LSNKRWFPYL--------DRYKCGDV--YLSSSEVVEALSPY------LMEERKERFVNV 153
L + RW P L ++ G+V +++ EV+E ++ + L ++ + +V
Sbjct: 60 LVSARWLPTLRPLIAAATGSFEDGEVPVFVAPEEVLERMTGFHLHRGALAAMQRPQLPSV 119
Query: 154 VK-------NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHV 206
V+ + +V+E L D NV A FRSA ALG+ +V V + YR + V
Sbjct: 120 VQLLTSAQPPQPTRRVVVLENLVDHTNVGAAFRSAAALGIDAVLVTPSCADPLYRRSVRV 179
Query: 207 SMGA---EKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT------ 257
SMG W +E W +LR G+ +A+ + D+IS+ D + P
Sbjct: 180 SMGTVFQVPWTRLESWPG---DIALLRDAGFTLASLALCEDSISLDDFA-ALPALRGPDA 235
Query: 258 --AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGC 315
AIV+G E G+ ++ SD IPM VDS NV+ A+ AV ATR VG
Sbjct: 236 RLAIVMGTEGHGLGKHTIAASDYTVKIPMDHGVDSLNVAAAS------AVVFWATRGVGA 289
>gi|407451634|ref|YP_006723358.1| hypothetical protein B739_0858 [Riemerella anatipestifer RA-CH-1]
gi|403312618|gb|AFR35459.1| hypothetical protein B739_0858 [Riemerella anatipestifer RA-CH-1]
Length = 176
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 155 KNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWL 214
K + +V++ + NV A FR+ADA ++ + + +RE ++GA + +
Sbjct: 20 KTSKTPLVVVLDNIRSMHNVGALFRTADAFLIEKIVLCGITPQPPHREIHKAALGATESV 79
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC--PTAIVVGNENRGVSDEA 272
D E L+++GY I D+IS+ D + S A+V+GNE G+SDE
Sbjct: 80 DWVYQKDISEAIKELKTQGYNIIGVEQTTDSISLSDFEISPNQKYALVLGNEVEGLSDET 139
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
LSL D IP G S NVSV GI++
Sbjct: 140 LSLYDSFIEIPQLGTKHSLNVSVCGGIVI 168
>gi|451335808|ref|ZP_21906373.1| putative rRNA methylase [Amycolatopsis azurea DSM 43854]
gi|449421700|gb|EMD27107.1| putative rRNA methylase [Amycolatopsis azurea DSM 43854]
Length = 271
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
V ++EG+ D N+ + FR+A ALGV V + + S YR + VSMG + +
Sbjct: 121 VLAILEGVGDHENLGSLFRNAAALGVDGVLLGAGCSDPLYRRSVRVSMGHVLRVPFATFG 180
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVSDEALSLSDL 278
+ + +LR RG+RIA D++S+ + P A+++G E G++ EA++ +D+
Sbjct: 181 SWPDDLELLRERGFRIAALTPRADSVSLRQLRDQTPEKVALMLGAEGPGLTGEAIAAADV 240
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHH 303
IPM VDS NV+ A I +
Sbjct: 241 AVRIPMPEGVDSLNVATAGAIAFYE 265
>gi|15672589|ref|NP_266763.1| tRNA/rRNA methyltransferase [Lactococcus lactis subsp. lactis
Il1403]
gi|385830100|ref|YP_005867913.1| 23S rRNA methyltransferase [Lactococcus lactis subsp. lactis CV56]
gi|418036917|ref|ZP_12675308.1| hypothetical protein LLCRE1631_00115 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|12723502|gb|AAK04705.1|AE006293_11 tRNA/rRNA methyltransferase [Lactococcus lactis subsp. lactis
Il1403]
gi|326406108|gb|ADZ63179.1| 23S rRNA methyltransferase [Lactococcus lactis subsp. lactis CV56]
gi|354695062|gb|EHE94684.1| hypothetical protein LLCRE1631_00115 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 252
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 127 VYLSSSEVVEAL----SPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSAD 182
V L S EV+++L SP + + V+ + S + L++E + D GNV R+AD
Sbjct: 74 VNLVSKEVLKSLADSESPQGLIAEVTKIEEVI-DFSAAKFLLLENVQDPGNVGTMIRTAD 132
Query: 183 ALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVG 242
A G +V ++ +++ Y SM + + A +CF L+ G I TT +
Sbjct: 133 AAGFSAV-ILLGETADIYSPKVMRSMQGSNFHLPLVRMAKEDCFAQLKKAGISILTTTLS 191
Query: 243 MDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
+++S Y + A+++GNE GVSDEA+ +D I M G +S NV+VAAGILM
Sbjct: 192 ANSVS-YKIINEPHFALIMGNEGAGVSDEAVKAADKLVHIDMPGQAESLNVAVAAGILM 249
>gi|357050805|ref|ZP_09112001.1| hypothetical protein HMPREF9478_01984 [Enterococcus saccharolyticus
30_1]
gi|355380430|gb|EHG27566.1| hypothetical protein HMPREF9478_01984 [Enterococcus saccharolyticus
30_1]
Length = 252
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM-GAEKWLDIELWDA 221
L+++ + D GNV R+ADA G V + ++ RY SM G+ L I D
Sbjct: 110 LILDNVQDPGNVGTMIRTADAAGFAGVFL-GTGTADRYSTKVLRSMQGSNFHLPILEGDV 168
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
P L+++G I T + +A+S ++ A ++GNE +GV + L L+D
Sbjct: 169 P-AFIQKLKAQGTAIYGTELNKEAVSYTELSKKGTAAFILGNEGQGVHPDILKLTDQNVY 227
Query: 282 IPMKGMVDSFNVSVAAGILMHHAVC 306
IP+ G +S NV++AAGILM+ V
Sbjct: 228 IPIYGQAESLNVAIAAGILMYFFVS 252
>gi|430822804|ref|ZP_19441379.1| RNA methyltransferase [Enterococcus faecium E0120]
gi|430865483|ref|ZP_19481118.1| RNA methyltransferase [Enterococcus faecium E1574]
gi|431739634|ref|ZP_19528554.1| RNA methyltransferase [Enterococcus faecium E2039]
gi|430442733|gb|ELA52754.1| RNA methyltransferase [Enterococcus faecium E0120]
gi|430552830|gb|ELA92547.1| RNA methyltransferase [Enterococcus faecium E1574]
gi|430604250|gb|ELB41741.1| RNA methyltransferase [Enterococcus faecium E2039]
Length = 254
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKEISTFLVSDEVMDAVSDLPTPQGILAVMALTAEGTPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQKDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS E LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VA+GI+++H
Sbjct: 238 SLNVGVASGIVLYH 251
>gi|363581356|ref|ZP_09314166.1| TrmH family RNA methyltransferase [Flavobacteriaceae bacterium
HQM9]
Length = 231
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV ++P + +E + ++ + +V++ L+D N A RSA+ +G + +
Sbjct: 57 VVAFVAPVDFYDLEELVIRTQESGETPLFIVLDQLTDARNFGAIIRSAECVGAHGIVIAK 116
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYR-IATTHVGMDAISVYDMD 252
++ + S GA L I ++ + +S G + +A T D S+Y ++
Sbjct: 117 TGAAPVSADTVKTSAGAVFNLPICKVAHLKDALFLFQSCGIQTVAATEKTED--SIYQIN 174
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ PTAI++G+E +GVS L L D + +PM G + S NVSVAAG+ ++ A+ R
Sbjct: 175 FKLPTAIIMGSEGKGVSLGILKLVDHKAKLPMFGEISSLNVSVAAGVFLYEAIRQR 230
>gi|257869609|ref|ZP_05649262.1| RNA methyltransferase [Enterococcus gallinarum EG2]
gi|257803773|gb|EEV32595.1| RNA methyltransferase [Enterococcus gallinarum EG2]
Length = 255
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM-GAEKWLDIELWDA 221
L+++ + D GNV R+ADA G V + ++ RY SM G+ L I D
Sbjct: 113 LILDNVQDPGNVGTMIRTADAAGFAGVFL-GTGTADRYSTKVLRSMQGSNFHLPILEGDV 171
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
P L+++G I T + +A+S ++ A ++GNE +GV + L L+D
Sbjct: 172 P-AFIQKLKAQGTAIYGTELNKEAVSYTELSKKGTAAFILGNEGQGVHPDILGLTDQNVY 230
Query: 282 IPMKGMVDSFNVSVAAGILMHHAVC 306
IP+ G +S NV++AAGILM+ V
Sbjct: 231 IPIYGQAESLNVAIAAGILMYFFVS 255
>gi|451819436|ref|YP_007455637.1| tRNA/rRNA methyltransferase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451785415|gb|AGF56383.1| tRNA/rRNA methyltransferase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 261
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR-HVSMGAEKWLDIELWDA 221
L+ + L D GN+ R+A A GVQ + +++ + Y E +MG+ ++ I D
Sbjct: 114 LLCDKLQDPGNLGTIIRTAHAAGVQGI-ILTKGTVDIYNEKTIRSTMGSIFYIPIHYDDE 172
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
N L+ +G+ + T + D + + D + VGNE GVS E L ++D +
Sbjct: 173 NFSLANELKEKGFNLVVTSLDTDK-NFFQADLRGKVLLTVGNEGNGVSSEVLDMADTKVK 231
Query: 282 IPMKGMVDSFNVSVAAGILMHHAV 305
IPM G +S NV++AA ++M+ V
Sbjct: 232 IPMPGNAESLNVAIAASVIMYEKV 255
>gi|297624394|ref|YP_003705828.1| tRNA/rRNA methyltransferase SpoU [Truepera radiovictrix DSM 17093]
gi|297165574|gb|ADI15285.1| tRNA/rRNA methyltransferase (SpoU) [Truepera radiovictrix DSM
17093]
Length = 276
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHV---SMGAEKWLDI 216
++ LVV+GL GN+ A R+AD +G +V + EN +V SMG+ +
Sbjct: 125 ALVLVVDGLEKPGNLGALLRTADGVGAAAVFATGAGTDF---ENPNVIRSSMGSV--FSL 179
Query: 217 ELWDAPR-ECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSL 275
AP E LR++G+R+ D + +D ++ TA+++G E+ G+S L
Sbjct: 180 PTLRAPAAELLAWLRAQGFRLVAATPHADTL-FWDAPYTGRTALLLGTEHDGLSALWLEA 238
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+D+R +IPM G+ DS NV+ A +L++ A+ R R
Sbjct: 239 ADVRVTIPMGGLADSLNVATAGALLLYEALRQRRRR 274
>gi|225010506|ref|ZP_03700977.1| RNA methyltransferase, TrmH family, group 3 [Flavobacteria
bacterium MS024-3C]
gi|225005335|gb|EEG43286.1| RNA methyltransferase, TrmH family, group 3 [Flavobacteria
bacterium MS024-3C]
Length = 246
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 8/214 (3%)
Query: 101 NDGVGSMESLSNKR-----WFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVK 155
D + ++E+L K+ + P + + + VV ++SP E +V++
Sbjct: 34 GDLIKTLENLIRKQGLNTSYVPVEKLDRLAKQHNNHQGVVASISPIEFHELDPFVESVLE 93
Query: 156 NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLD 215
+ + L+++ LSD N A R+A GV + + ++ + S GA +
Sbjct: 94 TKEAPLFLLLDQLSDVRNFGAIIRTASCTGVDGIIIQKKGTAPVTADTIKTSAGAAFQVP 153
Query: 216 IELWDAPRECFNVLRSRGYR-IATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALS 274
I D ++ L++ G + IA T + +Y++ ++ PTAIV+G+E+ G++ L
Sbjct: 154 IIKVDHLKDAVFHLQACGIQVIAATEKAKN--DLYEVSFTGPTAIVMGSEDMGITPSILK 211
Query: 275 LSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+++ + +PM+G + S NVSVA G+ ++ AV R
Sbjct: 212 VANAQAKLPMQGPISSLNVSVACGVFLYEAVRQR 245
>gi|393789136|ref|ZP_10377259.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides nordii
CL02T12C05]
gi|392652412|gb|EIY46072.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides nordii
CL02T12C05]
Length = 252
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K + ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEQGKN-----------PLFVMLDGITDVRNFGAIARTCECAAVDAVIIPARG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + + L+ G+ I D YD D
Sbjct: 133 SVTVNADAVKTSAGALHTLPVCREQSLKSTLQFLKDSGFHIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
++ PT I++G E++GVS E L+L D IPM G ++S NVSVAAGIL++ AV R + L
Sbjct: 189 YTTPTCIIMGAEDKGVSYENLALCDEWVKIPMLGSIESLNVSVAAGILIYEAVKQRHSDL 248
Query: 313 V 313
V
Sbjct: 249 V 249
>gi|297518058|ref|ZP_06936444.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli OP50]
Length = 174
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 199 RYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTA 258
R R + G+ W+ ++ + L+ +G +I TH+ +A+ ++D++ PT
Sbjct: 1 RMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTC 60
Query: 259 IVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR--ATRLVGCN 316
I++G E G++ EAL+L+D IPM GMV S NVSVA+ ++++ A R A + N
Sbjct: 61 ILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLREN 120
Query: 317 GDLTSEEKQILLAEFSLRHSKSAISIVHEYAKRK 350
L E+Q LL E ++ + AKRK
Sbjct: 121 SMLPEAEQQRLLFE-------GGYPVLAKVAKRK 147
>gi|218961471|ref|YP_001741246.1| putative tRNA/rRNA methyltransferase [Candidatus Cloacamonas
acidaminovorans]
gi|167730128|emb|CAO81040.1| putative tRNA/rRNA methyltransferase [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 269
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 5/234 (2%)
Query: 77 NVEKLLTNPDDVTQFMK--MERSCMVNDGVGSMESLSNKRWFPYLDRYKC-GDVYLSSSE 133
++EK LT + +Q ++ +E +V + L K P+L ++ +Y
Sbjct: 30 SLEKNLTEAEKRSQIIEHILELYLLVEKPLPQKMQLFIKELNPHLSPHQLLNKLYFYCDG 89
Query: 134 VVEALSPYLMEERKERFV--NVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
+ S + KE+ + ++ ++ + ++ + L NV + FR+A+ LG+ + V
Sbjct: 90 ALRKDSQMALSTEKEKVILDPDIRQKAKRITVICDNLRSVFNVGSLFRTAECLGIGKIIV 149
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
+ + +MG EK + + + + E G+ I +A SV+
Sbjct: 150 CGITPTPEHSNMPKTAMGTEKLVAWQYFPSTTEAIAFCHQEGFFIYALETIDNAKSVFQT 209
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
+ P AIV+GNE G+ L L D ++P G +S NV VA GI+++ +
Sbjct: 210 VYQFPLAIVIGNEALGIESSILELCDEFITLPQLGWKNSLNVGVATGIVLYQIL 263
>gi|442610341|ref|ZP_21025064.1| 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441748117|emb|CCQ11126.1| 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 248
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++KN + L+++G++D N+ A RSADA GV V V S+K R V+ GA +
Sbjct: 89 ILKNNASPFFLILDGVTDPHNLGACLRSADAAGVHGVIVTKDKSAKLSPTARKVACGAAE 148
Query: 213 WLD-IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
+ I++ + R + L+ G IA T G ++D + + P AIV+G E G+
Sbjct: 149 TVPLIQVTNLARTLRD-LKDAGVWIAGT-AGETETQLFDANLTGPVAIVMGAEGDGMRRL 206
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D+ IPM G V S NVSVA GI + + R T+
Sbjct: 207 TREHCDILVKIPMVGTVSSLNVSVATGICLFEVLRQRNTQ 246
>gi|387815024|ref|YP_005430511.1| tRNA (Guanosine-2'-O-)-methyltransferase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381340041|emb|CCG96088.1| tRNA (Guanosine-2'-O-)-methyltransferase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 244
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R V+ R + ++ + + N+SA RS DA G+ ++HVV + +R
Sbjct: 1 MTPERLARIKQVLNTRQPDLRVLTDQVHKPRNLSAIIRSCDAFGLANMHVVW--PKEGFR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R + G+ W+ L+++G+++ + A+ ++D++ P I++
Sbjct: 59 AFRKTAGGSFHWVTTHTHPTMDNAVTELKAQGHKLYAAQLSDRAVDFREVDYTVPCTIIM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
GNE GV+ +D IPM GMV+S NVS A I++ A R +L G
Sbjct: 119 GNEVDGVNPVTAEQADEHIVIPMMGMVESLNVSSACSIILSEA--QRQRKLAG 169
>gi|407473375|ref|YP_006787775.1| tRNA/rRNA methyltransferase SpoU [Clostridium acidurici 9a]
gi|407049883|gb|AFS77928.1| tRNA/rRNA methyltransferase SpoU [Clostridium acidurici 9a]
Length = 271
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
+V++ + D GN+ R+ADA G + V S + +MG+ + I +D
Sbjct: 123 IVLDRVQDPGNMGTIIRTADAFGANGIIVTSGCVDIYNPKTIRSTMGSIFQIPIVHFDDI 182
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
+EC L+ I T + + S YD+D A+V+GNE G+S + L SD I
Sbjct: 183 KECIMNLKKNNIEIIATSLDTNKYS-YDVDLKSDCALVIGNEASGISKDVLDNSDYLIKI 241
Query: 283 PMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
PM G +S N +VA+G++M+ + R+ L
Sbjct: 242 PMTGEAESLNAAVASGVVMYEVLRQRSKTL 271
>gi|319952204|ref|YP_004163471.1| RNA methyltransferase, trmh family, group 3 [Cellulophaga algicola
DSM 14237]
gi|319420864|gb|ADV47973.1| RNA methyltransferase, TrmH family, group 3 [Cellulophaga algicola
DSM 14237]
Length = 254
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ +SP +E V + + L+++ LSD N A R+A+ GV + +
Sbjct: 79 VIATISPITFFTLEELVEKVSAKETTPLFLLLDQLSDVRNFGAIIRTAECTGVDGIIIQK 138
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYR-IATTHVGMDAISVYDMD 252
++ + S GA + I D ++ L++ G + IA T + SVYD+
Sbjct: 139 KGAAPVTADTIKTSAGAAFKVPIAKVDHIKDAVFYLQASGIKTIAATEKTEN--SVYDIS 196
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
+ P AI++G+E+ G+S L + D + IP+ G + S NVSVA G+ ++ AV R+
Sbjct: 197 FKEPCAIIMGSEDLGISPSILKVVDDKAKIPLLGEIGSLNVSVACGVFLYEAVRQRS 253
>gi|374672603|dbj|BAL50494.1| tRNA/rRNA methyltransferase [Lactococcus lactis subsp. lactis IO-1]
Length = 252
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 127 VYLSSSEVVEAL----SPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSAD 182
V L S EV+++L SP + + V+ + S + L++E + D GNV R+AD
Sbjct: 74 VNLVSKEVLKSLADSESPQGLIAEVTKIEEVI-DFSAAKFLLLENVQDPGNVGTMIRTAD 132
Query: 183 ALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVG 242
A G +V ++ +++ Y SM + + A +CF L+ G I TT +
Sbjct: 133 AAGFSAV-ILLGETADIYSPKVMRSMQGSNFHLPLVRMAKEDCFAQLKKAGISILTTTLS 191
Query: 243 MDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
+++S Y + A+++GNE GVSDEA+ +D I M G +S NV+VAAGILM
Sbjct: 192 ANSVS-YKVINEPHFALIMGNEGAGVSDEAVKAADKLVHIDMSGQAESLNVAVAAGILM 249
>gi|332652352|ref|ZP_08418097.1| RNA methyltransferase, TrmH family [Ruminococcaceae bacterium D16]
gi|332517498|gb|EGJ47101.1| RNA methyltransferase, TrmH family [Ruminococcaceae bacterium D16]
Length = 278
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 97 SCMVNDGVGSMESLSNKRWFPYLDR-----YKCGDVYLSSSEVVEALSPY------LMEE 145
SC + G + L+ R P L + + +Y + +V+ L+ Y L
Sbjct: 46 SCALKAGCQPLSCLTESRHLPALTQLLPPPWDNIPIYTAPRDVLARLTGYELTRGMLCAM 105
Query: 146 RKERFVNVVK-NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
R+ + + RS +V+E ++D N+ A FRSA ALG+ V V S YR +
Sbjct: 106 RRPPLPSPEEICRSARRLVVLENITDSTNIGAIFRSAAALGMDGVLVSSSCCDPLYRRSV 165
Query: 205 HVSMGA-----EKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD--MDWSCPT 257
VSMG WL + + P+ LRS G+ A + ++IS+ D + +
Sbjct: 166 RVSMGTVFQIPWTWLHGDAFQWPQPGIATLRSLGFSTAAMALTDNSISIEDPVLADAEKL 225
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
AIV+G+E G+ +E ++ D IPM VDS NV+ A ++
Sbjct: 226 AIVLGSEGNGLCEETIAHCDYTARIPMYHGVDSLNVAAAGAVIF 269
>gi|120555648|ref|YP_959999.1| tRNA guanosine-2'-O-methyltransferase [Marinobacter aquaeolei VT8]
gi|120325497|gb|ABM19812.1| tRNA guanosine-2'-O-methyltransferase [Marinobacter aquaeolei VT8]
Length = 244
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 142 LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYR 201
+ ER R V+ R + ++ + + N+SA RS DA G+ ++HVV + +R
Sbjct: 1 MTPERLARIKQVLNTRQPDLRVLTDQVHKPRNLSAIIRSCDAFGLANMHVVW--PKEGFR 58
Query: 202 ENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVV 261
R + G+ W+ L+++G+++ + A+ ++D++ P I++
Sbjct: 59 AFRKTAGGSFHWVTTHTHPTMDNAVTELKAQGHKLYAAQLSDRAVDFREVDYTVPCTIIM 118
Query: 262 GNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVG 314
GNE GV+ +D IPM GMV+S NVS A I++ A R +L G
Sbjct: 119 GNEVDGVNPVTAEQADEHIVIPMMGMVESLNVSSACSIILSEA--QRQRKLAG 169
>gi|440802346|gb|ELR23275.1| RNA methyltransferase, TrmH superfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 361
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 36/230 (15%)
Query: 125 GDVYLSSSEVVEALSPYLME--ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSAD 182
G + + SSE P+ +E R R +++ R+ + LV+E D N A R+A+
Sbjct: 100 GPLLVPSSEA----PPHGVEAPRRLRRAEHILSQRTGRILLVLERCIDNLNQHAILRTAE 155
Query: 183 ALGVQSVHVVSCDSSKRYRE--NRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTH 240
LGVQ+V +V+ ++ E NR+V+M E W +
Sbjct: 156 CLGVQNVWLVNPPDQRKKNEGLNRNVTMVWEIW-------------------ATDLCAEA 196
Query: 241 VGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGIL 300
V +D S ++ AI+ G E GVS+E L +D R +PM G DSFN+SVA +L
Sbjct: 197 VCLDE-SAGGLELPQRVAIIAGREGDGVSEEMLKEADRRVYLPMYGFTDSFNLSVAMALL 255
Query: 301 MHHA--VCDRATRLVGCNGDLTSEEKQILLAEFSLRHSKSAISIVHEYAK 348
+ +C A R +LT EEK L ++ + +K EYA+
Sbjct: 256 VQRLFYMCPEARR------NLTPEEKHQLRIQWYTKLAKGVEKNREEYAR 299
>gi|410724142|ref|ZP_11363341.1| rRNA methylase [Clostridium sp. Maddingley MBC34-26]
gi|410602428|gb|EKQ56908.1| rRNA methylase [Clostridium sp. Maddingley MBC34-26]
Length = 261
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
Query: 151 VNVVKNRSYS-VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR-HVSM 208
+N +K ++Y L+ + L D GN+ R+A A GVQ + +++ + Y E +M
Sbjct: 102 MNNMKLKAYGDFYLLCDKLQDPGNLGTIIRTAHAAGVQGI-ILTKGTVDIYNEKTIRSTM 160
Query: 209 GAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGV 268
G+ ++ I D N L+ +G+ + T + + + + D + VGNE GV
Sbjct: 161 GSIFYVPIHYDDENLSLVNELKGKGFNLVVTSLDTNK-NFFQADLRGKVLLTVGNEGNGV 219
Query: 269 SDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
S E L+++D + IPM G +S NV++AA ++M+ V
Sbjct: 220 SGEVLAMADTKVKIPMPGNAESLNVAIAASVIMYEKV 256
>gi|441498268|ref|ZP_20980466.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB [Fulvivirga
imtechensis AK7]
gi|441437895|gb|ELR71241.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB [Fulvivirga
imtechensis AK7]
Length = 247
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
++++ ++D N A R+A+ G+ V + S S+ + S GA ++ + D
Sbjct: 101 IILDRVTDVRNFGAIARTAECAGIDGVIIPSRGSAAINSDAMKTSAGALNYIPVCRVDNL 160
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
+ L+ G I D S+Y++++ P AI++G+E G+S E L + D R I
Sbjct: 161 KNTLTFLKENGIHIMACTEKTDT-SIYEVNFRQPLAIILGSEEDGISPEYLKMCDSRGRI 219
Query: 283 PMKGMVDSFNVSVAAGILMHHAVCDRA 309
PM G +DS NVSV+A I + A+ RA
Sbjct: 220 PMSGRIDSLNVSVSAAIAIFEAIRQRA 246
>gi|336405004|ref|ZP_08585689.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp.
1_1_30]
gi|335939357|gb|EGN01232.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp.
1_1_30]
Length = 247
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K F ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEQGKNPFF-----------VMLDGVTDVRNFGAIARTCECAAVDAVIIPARG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S+ + S GA L + R L+ G+RI D YD D
Sbjct: 133 SASVNADAVKTSAGALHTLPVCREQNLRSTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS E L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPLCIIMGAEDTGVSYENLALCDEWVKIPMLGTIESLNVSVAAGILVYEAVKQR 244
>gi|257898078|ref|ZP_05677731.1| RNA methyltransferase [Enterococcus faecium Com15]
gi|257835990|gb|EEV61064.1| RNA methyltransferase [Enterococcus faecium Com15]
Length = 254
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 113 KRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC---LVVEGLS 169
K W +L K +L S EV++A+S + + + + L+++ +
Sbjct: 59 KEWGDWLAANKGISTFLVSDEVMDAVSDLPTPQGILAVMALTAEGAPDFSGGWLLLDNVQ 118
Query: 170 DFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVL 229
D GNV R+ADA + V ++ ++ Y SM + L E ++
Sbjct: 119 DPGNVGTMIRTADAFDMAGV-LLGKGTADIYSTKVLRSMQGSNYHLPVLQQDLTEVIPLM 177
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ +G+ + T + +A ++ ++ S AI++GNE +GVS LSL+D IPMKG +
Sbjct: 178 KDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQGILSLTDQNVYIPMKGNAE 237
Query: 290 SFNVSVAAGILMHH 303
S NV VAAGI+++H
Sbjct: 238 SLNVGVAAGIVLYH 251
>gi|85816776|gb|EAQ37961.1| SpoU rRNA methylase family protein [Dokdonia donghaensis MED134]
Length = 244
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
L+ V +SP + +E V++ + ++++ LSD N A R+A+ G
Sbjct: 65 LNHQGAVATISPVKYHDFEELVNRTVESGETPLFILLDQLSDVRNFGAIIRTAECTGAHG 124
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
V + + S GA + I D ++ L+ G ++ D ++
Sbjct: 125 VIIPKKGGAPLNGVAVKTSAGAAFSMPIAKVDHIKDAIYYLQGSGIQVVAATEKTDN-TL 183
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
YD+D+ PTAIV+G E+ GVS L + D + +P+KG + S NVSVA G ++ AV R
Sbjct: 184 YDVDFKEPTAIVMGREDSGVSPGVLKIVDHQAKLPLKGSIASLNVSVACGAFLYEAVRQR 243
>gi|255690061|ref|ZP_05413736.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides finegoldii
DSM 17565]
gi|423302457|ref|ZP_17280480.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides finegoldii
CL09T03C10]
gi|260624338|gb|EEX47209.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides finegoldii
DSM 17565]
gi|408471548|gb|EKJ90080.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides finegoldii
CL09T03C10]
Length = 247
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K F ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEQGKNPFF-----------VMLDGVTDVRNFGAIARTCECAAVDAVIIPARG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S+ + S GA L + + R L+ G+RI D YD D
Sbjct: 133 SASVNADAVKTSAGALHTLPVCREQSLRSTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS + L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPLCIIMGAEDTGVSYDNLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|15807204|ref|NP_295933.1| rRNA methylase SpoU [Deinococcus radiodurans R1]
gi|6460013|gb|AAF11758.1|AE002054_3 rRNA methylase SpoU [Deinococcus radiodurans R1]
Length = 230
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 145 ERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR 204
ER + V+ R ++ ++++ ++ N+SA R+ DA+GV H V
Sbjct: 6 ERYAKIRRVLSKRQPTLTVLMDEVNKPHNLSAIIRTCDAVGVPEAHAVPPKHGTLASFEG 65
Query: 205 HV----SMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
H S A KW+ + L+++G+++ TH+ ++ + D++ PT ++
Sbjct: 66 HTYEATSGSAHKWVKVHPHADAVSAVRELQAQGFQVLATHLSQRSVDYREPDYTKPTCVL 125
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLT 320
+G E GVSDEA +D IPM GMV S NVSVAA ++ A R + L+
Sbjct: 126 LGAEKWGVSDEAAEAADANIVIPMFGMVQSLNVSVAAATILFEAQRQRLAAGMYEEPQLS 185
Query: 321 SEEKQILLAEF 331
EE L E+
Sbjct: 186 PEELHRLSFEW 196
>gi|399024620|ref|ZP_10726653.1| rRNA methylase [Chryseobacterium sp. CF314]
gi|398080070|gb|EJL70898.1| rRNA methylase [Chryseobacterium sp. CF314]
Length = 176
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ ++++ + NV ATFR+ADA ++ + + +RE ++GA + +D
Sbjct: 26 LVIILDNIRSMHNVGATFRTADAFLIEKIVLCGITPQPPHREIHKAALGATESVDWAYEK 85
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYD--MDWSCPTAIVVGNENRGVSDEALSLSDL 278
N L+SRGY + ++ + D +D S A+++GNE G+SDEAL D+
Sbjct: 86 NINTIINDLKSRGYEVVGIEQTSNSTMITDFMVDRSKKYALILGNEVEGISDEALENIDV 145
Query: 279 RCSIPMKGMVDSFNVSVAAGILM 301
IP G S NVSV GI+M
Sbjct: 146 FLEIPQLGTKHSLNVSVCGGIVM 168
>gi|406997271|gb|EKE15386.1| tRNA/rRNA methyltransferase [uncultured bacterium]
Length = 174
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ L+++ + D N+ FR ADAL ++ +++ + + S+G K + E
Sbjct: 25 IYLILDNIYDTYNIGGLFRLADALNMKKIYLCGQTEIPPNSKIKKASIGTYKIVPWEYKK 84
Query: 221 APRECFNVLR---SRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSD 277
+ E LR + I +IS + ++ P A+++GNE G+S EAL L+D
Sbjct: 85 SAVEVIEELRKINNPSITITAIEQHPSSISYFKAEYKPPIALILGNETFGISQEALKLAD 144
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHH 303
+ IPM G+ S NV V+AGI+ +H
Sbjct: 145 MIVEIPMFGINKSLNVIVSAGIIGYH 170
>gi|380696015|ref|ZP_09860874.1| tRNA/rRNA methyltransferase [Bacteroides faecis MAJ27]
Length = 247
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K F ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEQGKNPFF-----------VMLDGITDVRNFGAIARTCECAAVDAVIIPARG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + R L+ G+RI D YD D
Sbjct: 133 SVSVNADAMKTSAGALHTLPVCREQNLRATLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS E L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDTGVSYENLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|334135267|ref|ZP_08508759.1| RNA methyltransferase, TrmH family [Paenibacillus sp. HGF7]
gi|333607089|gb|EGL18411.1| RNA methyltransferase, TrmH family [Paenibacillus sp. HGF7]
Length = 273
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSV----HVVSCDSSKRYRENRHVSMGAEKWLDI 216
+ +VV+G+ D GN+ RSADA+G +V V + K R +MG+ L I
Sbjct: 122 LVVVVDGVQDPGNLGTIIRSADAVGASAVVLGRGTVDLYNPKAIRS----TMGSLFHLPI 177
Query: 217 ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLS 276
D +E R G +I T + D+ S Y +D + PT +VVGNE RGVS A L+
Sbjct: 178 VEADL-QELLPAAREAGRQIVVTSLQADS-SCYALDMTRPTWLVVGNEGRGVSAAAGELA 235
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHA 304
R IPM+G +S NV++A +L+ A
Sbjct: 236 THRVIIPMQGQAESLNVAMATTVLLFEA 263
>gi|333383562|ref|ZP_08475220.1| RNA methyltransferase, TrmH family, group 3 [Dysgonomonas gadei
ATCC BAA-286]
gi|332827501|gb|EGK00247.1| RNA methyltransferase, TrmH family, group 3 [Dysgonomonas gadei
ATCC BAA-286]
Length = 246
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 106 SMESLSNKRWFPYLDRYKCGDVYLSSS---EVVEALSPYLMEERKERFVNVVKNRSYSVC 162
+++ + N+R + + G + S+ E +E + P+L E K+ F+
Sbjct: 50 AVQRVPNERLDRFTRKNHQGVIAFLSAITYEKIEDIVPFLYENGKDPFI----------- 98
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
LV++G++D N A R+ + GV ++ + + S + S GA L I + P
Sbjct: 99 LVLDGITDVRNFGAIARTCEVAGVNAIVIPAKGSVTVNADAVKTSAGA--LLKIPVCKEP 156
Query: 223 R--ECFNVLRSRGYRI-ATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
LR+ G ++ A + G D + ++D++ P A V+G E+ GV++E L ++D
Sbjct: 157 NLTSAIQFLRNSGIKVVAASERGADIYT--EIDYTGPIAFVMGAEDVGVANENLRIADNL 214
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
IP G + S NVSVAAG+L++ + + +
Sbjct: 215 VKIPQFGTIGSLNVSVAAGVLIYEVIRQKGLK 246
>gi|339024771|ref|ZP_08646678.1| RNA methyltransferase, TrmH family [Acetobacter tropicalis NBRC
101654]
gi|338750217|dbj|GAA09982.1| RNA methyltransferase, TrmH family [Acetobacter tropicalis NBRC
101654]
Length = 221
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 89/165 (53%), Gaps = 13/165 (7%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS-----CDSSKRYRENR---HVSM 208
R ++ V+E + N+ R+ +ALGV+ V++V D + RE + S+
Sbjct: 26 RFQNLIAVLEDPINIKNIGTVIRNVNALGVEKVYIVDPHRALSDDWQELREQKTLSKTSV 85
Query: 209 GAEKWLDIELWDAPRECFNVLRSRGYR--IATTHV-GMDAISVYDMDWSC--PTAIVVGN 263
A KW ++ +D+ +CF+ L + + + HV G +I + + D++ A+ GN
Sbjct: 86 SAVKWTFVKRFDSTADCFDHLEKMEFTSLVTSPHVKGKTSIFLDEGDYTIYPKLAVWFGN 145
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
E RG+SD A++ S++ SIPM GM++S N+ ++GI+++ R
Sbjct: 146 ETRGISDLAVARSEMCVSIPMFGMIESLNLGTSSGIMLYEVTKQR 190
>gi|390935295|ref|YP_006392800.1| tRNA/rRNA methyltransferase SpoU [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570796|gb|AFK87201.1| tRNA/rRNA methyltransferase (SpoU) [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 256
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 152 NVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE 211
++VK + V L + + D GNV RSADA V + ++ + +MG+
Sbjct: 100 DIVKEGGFYVIL--DEVQDPGNVGTIIRSADAFNVDGIFTINNTVDIYNPKVLRSTMGSI 157
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
L + P + F+VL+ G RI +T + + +YD D S A++ GNE+RGV+
Sbjct: 158 FHLPVVNDVEPSKLFDVLKRNGIRILSTSLKAEK-YIYDFDISKNAALIFGNESRGVNKY 216
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D IPM GM +S NVSVAA I ++ + R +
Sbjct: 217 LDGFIDDSFKIPMDGMAESLNVSVAASICLYESERQRLIK 256
>gi|365122487|ref|ZP_09339389.1| RNA methyltransferase, TrmH family, group 3 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642489|gb|EHL81841.1| RNA methyltransferase, TrmH family, group 3 [Tannerella sp.
6_1_58FAA_CT1]
Length = 248
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
+ P L EE K F+ ++++G++D N A R+ + GV ++ + S
Sbjct: 85 IVPGLYEEGKNPFI-----------ILLDGITDVRNFGAIARTCECAGVNAIVIPERGSV 133
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVY-DMDWSCP 256
+ S GA L + + E L++ G+R T A+ Y D+D++ P
Sbjct: 134 SVNADAVKTSAGALLHLPVCRESSVFEAVRFLKNSGFR--TIAASEKAVVNYTDIDYTVP 191
Query: 257 TAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
AIV+G E+ GVS E L L D ++P G++ S NVSVAAG++M+ V R
Sbjct: 192 VAIVMGAEDTGVSKEVLCLCDDMVALPQMGVIGSLNVSVAAGVMMYEVVRQR 243
>gi|408490381|ref|YP_006866750.1| rRNA methyltransferase, TrmH/SpoU family [Psychroflexus torquis
ATCC 700755]
gi|408467656|gb|AFU68000.1| rRNA methyltransferase, TrmH/SpoU family [Psychroflexus torquis
ATCC 700755]
Length = 249
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
EE E+ + + + + L+++G++D N+ A R+A+ GV +V + S++ E
Sbjct: 83 EETVEKVLEI---KEKPLFLLLDGITDVRNLGAILRTAECTGVDAVILPKSGSAQVNNET 139
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S GA + I + ++ L+S G I + SVY+++ + P A+++G
Sbjct: 140 IKTSAGAAFNIPICKVNHLKDALFYLKSSGVEIVAVTEKTNT-SVYELELNKPLALLMGG 198
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
E G+ L ++D++ +PM G ++S NVSVA G++++
Sbjct: 199 EGEGIQPSILKMADVKGKLPMLGSIESLNVSVACGVILYE 238
>gi|118444322|ref|YP_877839.1| rRNA methylase [Clostridium novyi NT]
gi|118134778|gb|ABK61822.1| rRNA methylase [Clostridium novyi NT]
Length = 262
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 150 FVNVVKNRSYSV------CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
+ VV N+ S+ ++++ + D GN+ RSA+A G V V +
Sbjct: 96 IIAVVDNKKISIEDKNGFYILIDKVQDPGNMGTIIRSANASGALGVIVTKGTVDIYNDKT 155
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
+MG+ + I + D E N L+ +G+++ + + + + +D+D + I VGN
Sbjct: 156 LRSTMGSIFKIPI-IEDNDFEVINDLKLKGFKLIVSSLDTEN-NFFDIDLTKKVIICVGN 213
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
E GVSDE +L D R IPM G +S NV VAA I+M+ V
Sbjct: 214 EGNGVSDEVYNLGDERVKIPMPGDAESLNVGVAASIMMYEVV 255
>gi|392989008|ref|YP_006487601.1| RNA methyltransferase [Enterococcus hirae ATCC 9790]
gi|392336428|gb|AFM70710.1| RNA methyltransferase [Enterococcus hirae ATCC 9790]
Length = 254
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
L+++ + D GNV R+ADA G+ V V+ S+ Y SM + L
Sbjct: 112 LLLDNVQDPGNVGTMIRTADAFGLSGV-VLGKGSADIYSTKVLRSMQGSNYHLPILQTDL 170
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
+ +L+ + + I T + DA S+ + AIV+GNE +GV E LSL+D I
Sbjct: 171 EQMIPLLKEQNFNIYGTELNEDARSLEQVTVPEKYAIVMGNEGQGVRPEILSLTDKNIYI 230
Query: 283 PMKGMVDSFNVSVAAGILMHH 303
P++G +S NV VAAGI+++H
Sbjct: 231 PIRGNAESLNVGVAAGIVLYH 251
>gi|419705811|ref|ZP_14233344.1| tRNA/rRNA methyltransferase [Mycoplasma canis UFG4]
gi|384395743|gb|EIE42171.1| tRNA/rRNA methyltransferase [Mycoplasma canis UFG4]
Length = 233
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++KN+ + L+++ + D N+ A R+A+A GV ++ + +S+ + VS G
Sbjct: 77 LIKNKP-EIVLMLDKIQDPHNLGAIIRTANATGVTNIVLPKENSASINATSLKVSSGGFV 135
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
++ ++ L+ GY T + +A+S+ ++++ P+ IVVGNE GVS
Sbjct: 136 GINFYRVNSLSATITKLKKAGYWSYATALDKEAVSLAHVNYNKPSIIVVGNEGDGVSKSV 195
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
LS+ D + IP KG V S NVSVA GI++
Sbjct: 196 LSVCDSKIYIPQKGTVQSMNVSVATGIVL 224
>gi|325571078|ref|ZP_08146650.1| TrmH family RNA methyltransferase [Enterococcus casseliflavus ATCC
12755]
gi|325156163|gb|EGC68349.1| TrmH family RNA methyltransferase [Enterococcus casseliflavus ATCC
12755]
Length = 253
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 119 LDRYKCGDVYLSSSEVVEALSP-------YLMEERKERFVNVVKNRSYSVCLVVEGLSDF 171
LD Y+ + YL + E+ LS + + E++E+ + + L+++ + D
Sbjct: 65 LDDYQE-ESYLITEEIAAMLSDLPTPQGIFAVVEKQEQNLQTLTGN----WLILDNVQDP 119
Query: 172 GNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRS 231
GNV R+ADA G V + ++ Y SM + L A LRS
Sbjct: 120 GNVGTMIRTADAAGFSGV-FLGEGTADLYSTKVLRSMQGSNYHLPILEGAIPPFLKQLRS 178
Query: 232 RGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSF 291
G I T + +A+ ++ A ++GNE +GV E L+L+D IP+ G +S
Sbjct: 179 AGVTIYGTELNKEAVPYTELPKEQTAAFILGNEGQGVHPELLALTDKNVYIPIYGQAESL 238
Query: 292 NVSVAAGILMHHAVC 306
NV++AAGILM+ +V
Sbjct: 239 NVAIAAGILMYFSVS 253
>gi|21674445|ref|NP_662510.1| SpoU rRNA methylase [Chlorobium tepidum TLS]
gi|21647630|gb|AAM72852.1| spoU rRNA methylase family protein [Chlorobium tepidum TLS]
Length = 257
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIE 217
S + ++++GL D NV A R+A+A+ +V ++ + S GA + +
Sbjct: 106 SSPLLVILQGLEDPHNVGAIIRTAEAVAADAVIMIEGKGAPISATVHKASAGALSHMRVC 165
Query: 218 LWDAPRECFNVLRSRGYRIATTHVGMDAISVY-DMDWSCPTAIVVGNENRGVSDEALSLS 276
+ + ++LR RG+ I M+A + D+DW PT +V+G E G+ E +
Sbjct: 166 KVKSVVKALDLLRERGFSIVAAD--MEAEHNHTDIDWKRPTVLVMGAEGSGLGSETRNRC 223
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D IPM G V+S NVSVAAG++++ A+ R
Sbjct: 224 DQIVRIPMAGCVESLNVSVAAGVMLYEAMRQR 255
>gi|384937841|ref|ZP_10029535.1| tRNA/rRNA methyltransferase [Mycoplasma canis UF31]
gi|419703860|ref|ZP_14231412.1| tRNA/rRNA methyltransferase [Mycoplasma canis PG 14]
gi|419704514|ref|ZP_14232060.1| tRNA/rRNA methyltransferase [Mycoplasma canis UF33]
gi|384393962|gb|EIE40409.1| tRNA/rRNA methyltransferase [Mycoplasma canis UF31]
gi|384394104|gb|EIE40550.1| tRNA/rRNA methyltransferase [Mycoplasma canis PG 14]
gi|384394248|gb|EIE40693.1| tRNA/rRNA methyltransferase [Mycoplasma canis UF33]
Length = 233
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++KN+ + L+++ + D N+ A R+A+A GV ++ + +S+ + VS G
Sbjct: 77 LIKNKP-EIVLMLDKIQDPHNLGAIIRTANATGVTNIVLPKENSASINATSLKVSSGGFV 135
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
++ ++ L+ GY T + +A+S+ ++++ P+ IVVGNE GVS
Sbjct: 136 GINFYRVNSLSATITKLKKAGYWSYATALDKEAVSLAHVNYNKPSIIVVGNEGDGVSKSV 195
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
LS+ D + IP KG V S NVSVA GI++
Sbjct: 196 LSVCDSKIYIPQKGTVQSMNVSVATGIVL 224
>gi|313206520|ref|YP_004045697.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485822|ref|YP_005394734.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|386321489|ref|YP_006017651.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|416109745|ref|ZP_11591625.1| RNA methylase, SpoU family protein [Riemerella anatipestifer RA-YM]
gi|442314279|ref|YP_007355582.1| hypothetical protein G148_0584 [Riemerella anatipestifer RA-CH-2]
gi|312445836|gb|ADQ82191.1| tRNA/rRNA methyltransferase (SpoU) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315023539|gb|EFT36543.1| RNA methylase, SpoU family protein [Riemerella anatipestifer RA-YM]
gi|325336032|gb|ADZ12306.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|380460507|gb|AFD56191.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|441483202|gb|AGC39888.1| hypothetical protein G148_0584 [Riemerella anatipestifer RA-CH-2]
Length = 176
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 155 KNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWL 214
K + +V++ + NV A FR+ADA ++ + + +RE ++GA + +
Sbjct: 20 KTSKTPLVVVLDNIRSMHNVGALFRTADAFLIEKIVLCGITPQPPHREIHKAALGATESV 79
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISV--YDMDWSCPTAIVVGNENRGVSDEA 272
D E L+++GY I D+IS+ ++++ + A+V+GNE G+SDEA
Sbjct: 80 DWVYQKDISEAIKELKTQGYNIIGVEQTTDSISLSDFEINPNQKYALVLGNEVEGLSDEA 139
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
L L D IP G S NVSV GI++
Sbjct: 140 LPLYDNFIEIPQLGTKHSLNVSVCGGIVI 168
>gi|145220210|ref|YP_001130919.1| RNA methyltransferase [Chlorobium phaeovibrioides DSM 265]
gi|145206374|gb|ABP37417.1| RNA methyltransferase, TrmH family, group 3 [Chlorobium
phaeovibrioides DSM 265]
Length = 249
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
E ++V +N + + +V++GL D N+ A R+A+A+ V +V + S
Sbjct: 89 EELLSVPRNTA-PLLVVLQGLDDPHNIGAIIRTAEAVAADGVVLVEGKGAPVNAVVHKAS 147
Query: 208 MGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVY-DMDWSCPTAIVVGNENR 266
GA + + + L + G R+ T M+A + Y D D+ PTAIV+G E
Sbjct: 148 AGALSHMRVAKVKSLVRSLEFLHANGIRVIATD--MEAETNYTDADFRLPTAIVLGAEGS 205
Query: 267 GVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
G++ EA+ D IPM G V+S NVSV AG++++ + R
Sbjct: 206 GLAPEAMEYCDETLRIPMAGCVESLNVSVTAGVVLYEVMRQR 247
>gi|386855452|ref|YP_006259629.1| RRNA methylase SpoU [Deinococcus gobiensis I-0]
gi|379998981|gb|AFD24171.1| RRNA methylase SpoU [Deinococcus gobiensis I-0]
Length = 210
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHV----SM 208
++ R ++ ++++ ++ N+SA R+ DA+GV H V H S
Sbjct: 1 MLSKRQPTLTVLMDEVNKPHNLSAIVRTCDAVGVLEAHAVPPRHGTLAAFEGHTYDATSG 60
Query: 209 GAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGV 268
A KW+ + L+ RG+++ TH+ ++ ++D++ PT +++G E GV
Sbjct: 61 SAHKWVRVNPHADAVGAVRELQGRGFQVLATHLSQRSVDYRELDYTRPTCVLLGAEKWGV 120
Query: 269 SDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLTSEEKQILL 328
SDEA +D IPM GMV S NVSVAA ++ A R + L E + L
Sbjct: 121 SDEAADAADANIVIPMYGMVQSLNVSVAAASILFEAQRQRLAAGMYGTPQLAPEALEALA 180
Query: 329 AEFS 332
E++
Sbjct: 181 FEWA 184
>gi|53714267|ref|YP_100259.1| tRNA/rRNA methyltransferase [Bacteroides fragilis YCH46]
gi|60682323|ref|YP_212467.1| tRNA:rRNA methyltransferase [Bacteroides fragilis NCTC 9343]
gi|265766241|ref|ZP_06094282.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_1_16]
gi|336411882|ref|ZP_08592342.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp.
2_1_56FAA]
gi|375359116|ref|YP_005111888.1| putative tRNA:rRNA methyltransferase [Bacteroides fragilis 638R]
gi|383119044|ref|ZP_09939783.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. 3_2_5]
gi|423250625|ref|ZP_17231640.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL03T00C08]
gi|423253951|ref|ZP_17234881.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL03T12C07]
gi|423260810|ref|ZP_17241712.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL07T00C01]
gi|423266947|ref|ZP_17245929.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL07T12C05]
gi|423271198|ref|ZP_17250169.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL05T00C42]
gi|423276647|ref|ZP_17255587.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL05T12C13]
gi|423283778|ref|ZP_17262662.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
HMW 615]
gi|52217132|dbj|BAD49725.1| tRNA/rRNA methyltransferase [Bacteroides fragilis YCH46]
gi|60493757|emb|CAH08547.1| putative tRNA:rRNA methyltransferase [Bacteroides fragilis NCTC
9343]
gi|251946248|gb|EES86625.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. 3_2_5]
gi|263253909|gb|EEZ25374.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_1_16]
gi|301163797|emb|CBW23352.1| putative tRNA:rRNA methyltransferase [Bacteroides fragilis 638R]
gi|335940226|gb|EGN02094.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp.
2_1_56FAA]
gi|387774571|gb|EIK36681.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL07T00C01]
gi|392651582|gb|EIY45244.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL03T00C08]
gi|392654509|gb|EIY48156.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL03T12C07]
gi|392696361|gb|EIY89556.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL05T12C13]
gi|392699122|gb|EIY92304.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL05T00C42]
gi|392699481|gb|EIY92659.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
CL07T12C05]
gi|404580324|gb|EKA85033.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
HMW 615]
Length = 246
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K F ++++G++D N A R+ + GV +V + +
Sbjct: 84 EDLVPFLFEEGKNPFF-----------VMLDGITDVRNFGAIARTCECAGVDAVIIPAKG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + L+ G+RI D YD D
Sbjct: 133 SVTVNADAMKTSAGALHTLPVCREQNLKTTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS + L+L D IPM G ++S NVSVAAGIL++ V R
Sbjct: 189 YTGPMCIIMGAEDTGVSYDNLALCDEWVKIPMLGSIESLNVSVAAGILIYEGVKQR 244
>gi|317124864|ref|YP_004098976.1| tRNA/rRNA methyltransferase SpoU [Intrasporangium calvum DSM 43043]
gi|315588952|gb|ADU48249.1| tRNA/rRNA methyltransferase (SpoU) [Intrasporangium calvum DSM
43043]
Length = 271
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 8/137 (5%)
Query: 162 CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA---EKWLDIEL 218
+V+E + D NV A FRSA ALGV +V V + YR + VSMG W I+
Sbjct: 122 IVVLEDIVDHTNVGAVFRSAAALGVDAVLVTPRCADPLYRRSIRVSMGTVFQVPWTRIDP 181
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT--AIVVGNENRGVSDEALSLS 276
W VL+S G+ +A + DA+++ ++ + PT A+V+G E G+ ++ +
Sbjct: 182 WPG---GMAVLQSHGFTVAALALSDDAVALDVLEAAPPTKVAVVLGAEGDGLGGTTVAAA 238
Query: 277 DLRCSIPMKGMVDSFNV 293
D+ IPM G VDS NV
Sbjct: 239 DVVVRIPMAGGVDSLNV 255
>gi|363542542|ref|ZP_09312125.1| tRNA/rRNA methyltransferase [Mycoplasma ovipneumoniae SC01]
Length = 219
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 107 MESLSNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEE----RKERFVNVVKNRSY--- 159
+E++ N F + K D + S++ V+ ++ +++ + FV VV+N +
Sbjct: 2 IEAIKNGFVFKQIYCLKQPDSPIFSNQKVQIVNKDFLDKLVLANHQGFVGVVENFKFFEI 61
Query: 160 --------SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE 211
+ LV++ + D N+ R+A+ G++ + + ++K V+ G
Sbjct: 62 DVLNKDKPEIVLVLDHIHDQNNLGNIIRTANCFGIKHIILPKKRAAKLNETTFKVASGGF 121
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
+ L ++ N L+ G+ I T++ + + ++ ++ P A++VGNE+ G+
Sbjct: 122 IGIKFILVNSIVAAINKLKKIGFWIYATNLNEKSKKINEIQFNFPCAVIVGNESTGIKKS 181
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
+L SD IPM+G +DS NV+VA GI++ +
Sbjct: 182 SLYASDDSFFIPMEGKIDSLNVTVATGIILFY 213
>gi|313148238|ref|ZP_07810431.1| tRNA/rRNA methyltransferase [Bacteroides fragilis 3_1_12]
gi|313137005|gb|EFR54365.1| tRNA/rRNA methyltransferase [Bacteroides fragilis 3_1_12]
Length = 246
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K F ++++G++D N A R+ + GV +V + +
Sbjct: 84 EDLVPFLFEEGKSPFF-----------VMLDGITDVRNFGAIARTCECAGVDAVIIPAKG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + L+ G+RI D YD D
Sbjct: 133 SVTVNADAMKTSAGALHTLPVCREQNLKTTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS + L+L D IPM G ++S NVSVAAGIL++ V R
Sbjct: 189 YTGPMCIIMGAEDTGVSYDNLALCDEWVKIPMLGSIESLNVSVAAGILIYEGVKQR 244
>gi|310658445|ref|YP_003936166.1| RNA methyltransferase, TrmH family [[Clostridium] sticklandii]
gi|308825223|emb|CBH21261.1| RNA methyltransferase, TrmH family [[Clostridium] sticklandii]
Length = 261
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 17/150 (11%)
Query: 162 CLVVEGLSDFGNVSATFRSADALGVQSV----HVVSCDSSKRYRENRHVSMGAEKWLDIE 217
L+++ + D GN+ R+ADA G+ +V SSK R +MG+ L I
Sbjct: 114 ILILDKIQDPGNLGTILRTADAAGISTVICTKGTTDIYSSKVVRS----AMGSLMHLKIL 169
Query: 218 LWDAPRECFNVLRSRGYRIATTHV--GMDAISVYDM--DWSCPTAIVVGNENRGVSDEAL 273
D E N+L+ Y+I ++ + +D Y++ AIV+GNE G+ D+ L
Sbjct: 170 FID-DYESLNILKKNDYKIISSSLENALD----YNVLSTIQSKVAIVLGNEANGIDDKLL 224
Query: 274 SLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
+LSD++ IP+ G +S NV +A GILM+
Sbjct: 225 NLSDIKVKIPLYGAAESLNVGIAGGILMYK 254
>gi|419705160|ref|ZP_14232700.1| tRNA/rRNA methyltransferase [Mycoplasma canis UFG1]
gi|384395545|gb|EIE41975.1| tRNA/rRNA methyltransferase [Mycoplasma canis UFG1]
Length = 233
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++KN+ + L+++ + D N+ A R+A+A GV ++ + +S+ + VS G
Sbjct: 77 LIKNKP-EIVLMLDKIQDPHNLGAIIRTANATGVTNIVLPKENSASINATSLKVSSGGFV 135
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
++ ++ L+ GY T + +A+S+ ++++ P+ I+VGNE GVS
Sbjct: 136 GINFYRVNSLSATITKLKKAGYWSYATALDKEAVSLAHVNYNKPSIIIVGNEGDGVSKSV 195
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
LS+ D + IP KG V S NVSVA GI++
Sbjct: 196 LSVCDSKIYIPQKGTVQSMNVSVATGIVL 224
>gi|160882253|ref|ZP_02063256.1| hypothetical protein BACOVA_00199 [Bacteroides ovatus ATCC 8483]
gi|299146570|ref|ZP_07039638.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp.
3_1_23]
gi|336414266|ref|ZP_08594612.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides ovatus
3_8_47FAA]
gi|383113806|ref|ZP_09934574.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. D2]
gi|423289227|ref|ZP_17268077.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides ovatus
CL02T12C04]
gi|423298520|ref|ZP_17276577.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides ovatus
CL03T12C18]
gi|156112342|gb|EDO14087.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides ovatus
ATCC 8483]
gi|298517061|gb|EFI40942.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp.
3_1_23]
gi|313695961|gb|EFS32796.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. D2]
gi|335933378|gb|EGM95380.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides ovatus
3_8_47FAA]
gi|392663061|gb|EIY56615.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides ovatus
CL03T12C18]
gi|392667923|gb|EIY61428.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides ovatus
CL02T12C04]
Length = 247
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K F ++++G++D N A R+ + V +V +
Sbjct: 84 EDLVPFLFEQGKNPFF-----------VMLDGVTDVRNFGAIARTCECAAVDAVIIPVRG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S+ + S GA L + R L+ G+RI D YD D
Sbjct: 133 SASVNADAVKTSAGALHTLPVCREQNLRSTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS E L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPLCIIMGAEDTGVSYENLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|379058741|ref|ZP_09849267.1| rRNA methylase [Serinicoccus profundi MCCC 1A05965]
Length = 268
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA---EKWLDIELWD 220
V+E + D NV A FRSA ALGV +V V + YR + VSMG W I+ W
Sbjct: 123 VLEDIVDHTNVGAAFRSAAALGVDAVLVTPRCADPLYRRSVRVSMGTVFQVPWTRIDPWP 182
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVSDEALSLSDL 278
+LR G+ +A + DA+S+ +++ P A+V+G E G+S + + +DL
Sbjct: 183 ---HGVEMLRGLGFTVAALALSDDAVSLEELERRAPERLALVLGTEGDGLSRQTVDAADL 239
Query: 279 RCSIPMKGMVDSFN 292
IPM G VDS N
Sbjct: 240 VVRIPMGGGVDSLN 253
>gi|78187470|ref|YP_375513.1| RNA methyltransferase TrmH, group 3 [Chlorobium luteolum DSM 273]
gi|78167372|gb|ABB24470.1| RNA methyltransferase TrmH, group 3 [Chlorobium luteolum DSM 273]
Length = 248
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIE 217
S + +V++GL D N+ A R+A+A+ V +V + S GA + +
Sbjct: 97 SAPLLVVLQGLDDPHNIGAIIRTAEAVAADGVVLVEGKGAPVNAVVHKASAGALSHMRVA 156
Query: 218 LWDAPRECFNVLRSRGYRIATTHVGMDAISVY-DMDWSCPTAIVVGNENRGVSDEALSLS 276
+ C +L G ++ T M+A + Y D D+ TAIV+G E G++ EA+
Sbjct: 157 KVKSLVRCLELLHREGIQVLATD--MEAETNYTDADFRKATAIVLGAEGSGLAPEAMEFC 214
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D IPM G V+S NVSV+AG++++ A+ R
Sbjct: 215 DRVVRIPMAGCVESLNVSVSAGVMLYEAMRQR 246
>gi|193212230|ref|YP_001998183.1| RNA methyltransferase, TrmH family, group 3 [Chlorobaculum parvum
NCIB 8327]
gi|193085707|gb|ACF10983.1| RNA methyltransferase, TrmH family, group 3 [Chlorobaculum parvum
NCIB 8327]
Length = 257
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIE 217
S + ++++GL D NV A R+A+A+ SV ++ + S GA + +
Sbjct: 106 SSPLLVILQGLEDPHNVGAIIRTAEAVAADSVIMIEGKGAPISATVHKASAGALSHMRVC 165
Query: 218 LWDAPRECFNVLRSRGYRIATTHVGMDAISVY-DMDWSCPTAIVVGNENRGVSDEALSLS 276
+ + ++L RG+ I M+A + D+DW PT +V+G E +G+ E
Sbjct: 166 KVKSLVKTLDLLHERGFSIVAAD--MEAEHNHTDIDWKRPTVLVMGAEGKGLGSETRKRC 223
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D IPM G V+S NVSVAAG++++ A+ R
Sbjct: 224 DQIVRIPMAGCVESLNVSVAAGVMLYEAMRQR 255
>gi|423277899|ref|ZP_17256813.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
HMW 610]
gi|404586774|gb|EKA91335.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
HMW 610]
Length = 264
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K F ++++G++D N A R+ + GV +V + +
Sbjct: 102 EDLVPFLFEEGKSPFF-----------VMLDGITDVRNFGAIARTCECAGVDAVIIPAKG 150
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + L+ G+RI D YD D
Sbjct: 151 SVTVNADAMKTSAGALHTLPVCREQNLKTTLQYLKDSGFRIVAATEKGD----YDYTKAD 206
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS + L+L D IPM G ++S NVSVAAGIL++ V R
Sbjct: 207 YTGPMCIIMGAEDTGVSYDNLALCDEWVKIPMLGSIESLNVSVAAGILIYEGVKQR 262
>gi|390941962|ref|YP_006405723.1| rRNA methylase [Belliella baltica DSM 15883]
gi|390415390|gb|AFL82968.1| rRNA methylase, putative, group 3 [Belliella baltica DSM 15883]
Length = 257
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ LV++ ++D N A R+AD GV ++ + S++ + S GA +L +
Sbjct: 110 LILVLDRITDVRNFGAMARTADCAGVHAIVIPEKGSAQINSDAVKTSAGALNFLPVCRVK 169
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
L+ G + + + ++Y+ D++ PTA+V+G+E G+S E + +SD
Sbjct: 170 NLYYTVKDLKKMGLSVVSVTEKTER-AMYEADFTVPTALVLGSEEDGISPEIMGISDEFV 228
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDR 308
IP+ G +DS NVSVAAG++++ A+ R
Sbjct: 229 KIPLSGNIDSLNVSVAAGVVIYEAIRQR 256
>gi|424664048|ref|ZP_18101085.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
HMW 616]
gi|404576084|gb|EKA80824.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fragilis
HMW 616]
Length = 264
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K F ++++G++D N A R+ + GV +V + +
Sbjct: 102 EDLVPFLFEEGKSPFF-----------VMLDGITDVRNFGAIARTCECAGVDAVIIPAKG 150
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + L+ G+RI D YD D
Sbjct: 151 SVTVNADAMKTSAGALHTLPVCREQNLKTTLQYLKDSGFRIVAATEKGD----YDYTKAD 206
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS + L+L D IPM G ++S NVSVAAGIL++ V R
Sbjct: 207 YTGPMCIIMGAEDTGVSYDNLALCDEWVKIPMLGSIESLNVSVAAGILIYEGVKQR 262
>gi|326800453|ref|YP_004318272.1| TrmH family RNA methyltransferase [Sphingobacterium sp. 21]
gi|326551217|gb|ADZ79602.1| RNA methyltransferase, TrmH family, group 3 [Sphingobacterium sp.
21]
Length = 241
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ +SP ++ ++ + + + L+++G++D N A R+A GV ++ V +
Sbjct: 65 VIAVISPITYQKIEDVIPTIYEEGKVPLILILDGITDVRNFGAIARTAACAGVDALVVPN 124
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAISVYDMD 252
S++ + S GA + + ++ + L+ G ++ A T D ++Y D
Sbjct: 125 KGSAEINPDAIKTSAGALYKIAVCRHESLTQVIKFLQESGLQVVACTEKTGD--TIYKPD 182
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+ PTAIV+G E+ G+SD + +D IPM G + S NVSV+AG++++ A+ R +
Sbjct: 183 FKSPTAIVMGAEDTGISDSIIRNADYLAKIPMFGDIASLNVSVSAGVIIYEAIRQRVNQ 241
>gi|332292458|ref|YP_004431067.1| TrmH family RNA methyltransferase [Krokinobacter sp. 4H-3-7-5]
gi|332170544|gb|AEE19799.1| RNA methyltransferase, TrmH family, group 3 [Krokinobacter sp.
4H-3-7-5]
Length = 244
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 134 VVEALSPYLMEERKERFVN-VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
VV A+S Y EE VN VV+ + + ++++ LSD N A R+A+ GV + +
Sbjct: 73 VVSAISFYDFEE----LVNAVVETEAAPLFILLDQLSDVRNFGAIIRTAECTGVHGIIIP 128
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
+ S GA + I D ++ L+ G ++ + ++++ D
Sbjct: 129 KKGGAPVNGVAIKTSAGAAFNIPIAKVDHIKDAIYYLQGSGVQVVAATEKTET-TLFETD 187
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
++ PTAIV+G E+ GVS L + D + +P+KG + S NVSVA G ++ V R+
Sbjct: 188 FTSPTAIVMGREDSGVSPGVLKIVDKQAKLPLKGSIASLNVSVACGAFLYEIVRQRS 244
>gi|258645874|ref|ZP_05733343.1| RNA methyltransferase, TrmH family, group 3 [Dialister invisus DSM
15470]
gi|260403247|gb|EEW96794.1| RNA methyltransferase, TrmH family, group 3 [Dialister invisus DSM
15470]
Length = 282
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V +L PY + +E + R + ++++G+ D N+ A R+A+ G +V +
Sbjct: 111 VAASLKPYAYADLEEVLSSC--ERKDPLLILLDGVEDVRNIGAIVRTAECAGAAAVLLPK 168
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
SS + GA +L + R+ L+ RG+ MD +Y D
Sbjct: 169 HRSSPVTAAAMKTASGAFAYLPVCQIGNIRQTLEKLKERGF--WAVGADMDGGDLYQADL 226
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
P IV+G E +G+S + D IPM+G V S NVSVAA +LM+ AV R
Sbjct: 227 KGPLVIVMGAEGKGISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQR 281
>gi|333896858|ref|YP_004470732.1| TrmH family RNA methyltransferase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112123|gb|AEF17060.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 256
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 152 NVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE 211
++VK + V L + + D GNV RSADA V V ++ + +MG+
Sbjct: 100 DIVKEGGFYVIL--DEVQDPGNVGTIIRSADAFNVDGVFAINNTVDIYNPKVLRSTMGSI 157
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
L + P F+VL+ G RI +T + + +YD D S A++ GNE+RGV+
Sbjct: 158 FHLPVVNDVEPSRLFHVLKKHGIRILSTSLKAEK-YIYDFDISKNAALIFGNESRGVNRL 216
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D IPM GM +S NVSVAA I ++ + R +
Sbjct: 217 LDEFIDSSFKIPMDGMAESLNVSVAASICLYESERQRLIK 256
>gi|225848046|ref|YP_002728209.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643892|gb|ACN98942.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 247
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV LSP + V+K + + LV++ ++D NV + R+A+ LGV + +
Sbjct: 73 VVALLSPIQYWNEDKIIDKVIKEKG--ILLVLDHITDPQNVGSIMRTAEILGVSGIILPK 130
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
SS S GA +L I + R + +G + G +++++D+
Sbjct: 131 ERSSPINEVVVKASTGAVFYLPIAKVGSLRNTLEKFKKKGGWVVAVEKGGK--NIHEIDF 188
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
P A+VVG+E +GVS L +D+ SIPMKG + SFNVS A I +
Sbjct: 189 PFPLALVVGSEGKGVSKSVLEEADIVASIPMKGKITSFNVSNATAIAL 236
>gi|189467068|ref|ZP_03015853.1| hypothetical protein BACINT_03451 [Bacteroides intestinalis DSM
17393]
gi|189435332|gb|EDV04317.1| RNA methyltransferase, TrmH family [Bacteroides intestinalis DSM
17393]
Length = 246
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K + ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEEGKN-----------PLFVMLDGVTDVRNFGAIARTCECAAVDAVIIPAKG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + L+ G+RI D YD D
Sbjct: 133 SVTVNADAMKTSAGALHVLPVCREQNLKTTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E++GVS E L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDKGVSYENLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|262408867|ref|ZP_06085412.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647643|ref|ZP_06725210.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides ovatus SD
CC 2a]
gi|294810718|ref|ZP_06769366.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides
xylanisolvens SD CC 1b]
gi|298481741|ref|ZP_06999931.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. D22]
gi|345508472|ref|ZP_08788103.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. D1]
gi|423215842|ref|ZP_17202368.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides
xylanisolvens CL03T12C04]
gi|262353078|gb|EEZ02173.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637009|gb|EFF55460.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides ovatus SD
CC 2a]
gi|294442051|gb|EFG10870.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides
xylanisolvens SD CC 1b]
gi|295087702|emb|CBK69225.1| rRNA methylase, putative, group 3 [Bacteroides xylanisolvens XB1A]
gi|298271963|gb|EFI13534.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. D22]
gi|345455166|gb|EEO50804.2| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. D1]
gi|392691322|gb|EIY84568.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides
xylanisolvens CL03T12C04]
Length = 247
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K F ++++G++D N A R+ + V +V +
Sbjct: 84 EDLVPFLFEQGKNPFF-----------VMLDGVTDVRNFGAIARTCECAAVDAVIIPVRG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S+ + S GA L + R L+ G+RI D YD D
Sbjct: 133 SASVNADAVKTSAGALHTLPVCREQNLRSTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS E L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPLCIIMGAEDTGVSYENLALCDEWVKIPMLGTIESLNVSVAAGILVYEAVKQR 244
>gi|366164702|ref|ZP_09464457.1| RNA methyltransferase [Acetivibrio cellulolyticus CD2]
Length = 267
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 113 KRWFPYLDRYKCGDVYLSSS----EVVEALSPY----LMEERKERFVNVVKNRSYSVCLV 164
K L+ C +VY ++ EV + +P ++ ++ +V N+++ LV
Sbjct: 64 KEILEQLENSNCCNVYTLTNKLYMEVTDTENPQGILAILNKKSISLESVYDNKNF--FLV 121
Query: 165 VEGLSDFGNVSATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEKWLDIELWD 220
++ L D GN+ R+ADA GV V V V + K R +MG+ + I +
Sbjct: 122 LDSLQDPGNMGTIIRTADAAGVTGVIVSKGCVDVYNPKVLRS----TMGSLFHIPICYSE 177
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+ ++++G R+ H+ + + +++D+ AI+VGNE G+SD +S+
Sbjct: 178 NILQTLEEMKNKGIRLCAAHLS-GSKNYFELDYKDNIAIIVGNEANGISDSVAGISNELV 236
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAV 305
IPM G +S N SVAAG+LM+ +
Sbjct: 237 RIPMAGKSESLNASVAAGLLMYEVL 261
>gi|373495592|ref|ZP_09586148.1| hypothetical protein HMPREF0402_00021 [Fusobacterium sp. 12_1B]
gi|404366712|ref|ZP_10972094.1| hypothetical protein FUAG_01904 [Fusobacterium ulcerans ATCC 49185]
gi|313689554|gb|EFS26389.1| hypothetical protein FUAG_01904 [Fusobacterium ulcerans ATCC 49185]
gi|371967628|gb|EHO85097.1| hypothetical protein HMPREF0402_00021 [Fusobacterium sp. 12_1B]
Length = 255
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEKWLDIEL 218
+V++ + D GN+ R ADA G + + + V C + K R SMG+ ++I L
Sbjct: 109 VVLDKIGDPGNLGTIIRVADAAGFKDIILTKGSVDCYNEKVVRS----SMGSILNMNI-L 163
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
+ E L+ GY+I T + D++S +M + AIV G+E GVS L + D
Sbjct: 164 YMEEEELITFLKREGYKIEVTALDKDSVSYTEMKLTERNAIVFGSEGDGVSQNFLKMCDE 223
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHA 304
+ IP+ G+ +S NV++A GI+++
Sbjct: 224 KIIIPIYGIAESLNVAMACGIILYKT 249
>gi|167762351|ref|ZP_02434478.1| hypothetical protein BACSTE_00705 [Bacteroides stercoris ATCC
43183]
gi|167699994|gb|EDS16573.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides stercoris
ATCC 43183]
Length = 246
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K ++++G++D N A R+ + V +V + + +
Sbjct: 84 EDLVPFLFEEGKNPLF-----------VMLDGITDVRNFGAIARTCECAAVDAVIIPAKN 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + ++ L+S G+ I D YD D
Sbjct: 133 SVTVNADAVKTSAGALHTLPVCREQNLKDTLQFLKSSGFHIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E++GVS + L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDKGVSYDNLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|145219563|ref|YP_001130272.1| tRNA/rRNA methyltransferase SpoU [Chlorobium phaeovibrioides DSM
265]
gi|145205727|gb|ABP36770.1| tRNA/rRNA methyltransferase (SpoU) [Chlorobium phaeovibrioides DSM
265]
Length = 178
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 159 YSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
+ V L++ + NV + FRSADA G++ + + ++ +E ++GA+ + E
Sbjct: 24 HPVILMLHNIRSMWNVGSMFRSADAAGIEKIILSGYTATPPRKEITKTALGADASMPWEY 83
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD-WSCPTAIVVGNENRGVSDEALSLSD 277
D P++ L+ G RI + + +M P ++VGNE +G+ D L+ D
Sbjct: 84 TDNPQQTLRDLKKSGVRICGLEIAEGSRLYTEMKAQDFPVCLLVGNEVQGIEDNLLAQCD 143
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHHAV 305
L IP G+ S NVSVAAG+++ V
Sbjct: 144 LVLEIPQFGIKHSLNVSVAAGVVLFELV 171
>gi|427387745|ref|ZP_18883730.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides
oleiciplenus YIT 12058]
gi|425725144|gb|EKU88017.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides
oleiciplenus YIT 12058]
Length = 246
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEEGKNPLF-----------VMLDGVTDVRNFGAIARTCECAAVDAVIIPAKG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + L+ G+RI D YD D
Sbjct: 133 SVTVNADAMKTSAGALHVLPVCREQNLKTTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E++GVS E L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDKGVSYENLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|336171567|ref|YP_004578705.1| TrmH family RNA methyltransferase [Lacinutrix sp. 5H-3-7-4]
gi|334726139|gb|AEH00277.1| RNA methyltransferase, TrmH family, group 3 [Lacinutrix sp.
5H-3-7-4]
Length = 244
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
V +SP + + N + + + L+++ LSD N A R+A+ GV + +
Sbjct: 71 VAQISPIAFHDFETLVDNTIASGVTPLFLLLDQLSDVRNFGAIIRTAECTGVHGIVIQKK 130
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYR-IATTHVGMDAISVYDMDW 253
+ + S GA + I D ++ L++ G + IA T D +V+D+ +
Sbjct: 131 GGAPVNGDTIKTSAGAVFKVPICKVDHIKDAMFHLQASGVKVIAATEKTND--TVFDVSF 188
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
P AIV+G+E RG++ L L+D R +P+ G ++S NVSVA G ++ A+ R
Sbjct: 189 KQPCAIVMGSEGRGINPSVLKLADARAKLPLLGDIESLNVSVACGAFLYEAIRQR 243
>gi|220910387|ref|YP_002485698.1| tRNA/rRNA methyltransferase SpoU [Cyanothece sp. PCC 7425]
gi|219866998|gb|ACL47337.1| tRNA/rRNA methyltransferase (SpoU) [Cyanothece sp. PCC 7425]
Length = 260
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 11/158 (6%)
Query: 159 YSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMG-AEKWLDIE 217
+ + L VE L D GN+ R+A A G + V ++S DS + EN V A +W +
Sbjct: 108 HHLGLAVETLQDPGNLGTMIRTAAAAGAEGV-LLSSDSVEL--ENPKVLRATAGQWFRLP 164
Query: 218 LWDAPRECFNV----LRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEAL 273
L A E F R +G ++ T + + +D+D +CPT ++GNE G+S +
Sbjct: 165 LSVA--EDFQAELQHYRQQGIQVVAT-LPQAQSNYWDVDLTCPTLFLLGNEGAGLSASVV 221
Query: 274 SLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+L+D + IP++ V+S NV++AA +L++ A R +R
Sbjct: 222 ALADRQVKIPLQPGVESLNVAIAAALLLYEAQRQRQSR 259
>gi|403070314|ref|ZP_10911646.1| rRNA methylase [Oceanobacillus sp. Ndiop]
Length = 245
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Query: 155 KNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWL 214
K+R+ L+++ + D GN+ R+ADA G+ + + + + ++ +
Sbjct: 96 KDRNGDHFLIIDSIQDPGNLGTIIRTADAAGMDGI--IIGEGTVDLYNDKVIRSTQGSLF 153
Query: 215 DIELWDAP-RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEAL 273
I ++ A +E VL+ G+ + T + ++A++ ++ + AI++GNE GV E +
Sbjct: 154 HIPIYHAELKEEVEVLKQEGFSVWATAL-LNAVNYKEVSPNGKVAIILGNEGAGVQPELI 212
Query: 274 SLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
++D +IP+ G +S NVS+AAGILM+H
Sbjct: 213 EIADQSVTIPIYGRAESLNVSIAAGILMYH 242
>gi|153808238|ref|ZP_01960906.1| hypothetical protein BACCAC_02526 [Bacteroides caccae ATCC 43185]
gi|423219116|ref|ZP_17205612.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides caccae
CL03T12C61]
gi|149129141|gb|EDM20357.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides caccae
ATCC 43185]
gi|392625882|gb|EIY19938.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides caccae
CL03T12C61]
Length = 247
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K F ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEQGKNPFF-----------VMLDGVTDVRNFGAIARTCECAAVDAVIIPARG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S+ + S GA L + R L+ G+RI D YD D
Sbjct: 133 SASVNADAVKTSAGALHTLPVCREQNLRATLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS + L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPLCIIMGAEDTGVSYDNLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|333379158|ref|ZP_08470882.1| RNA methyltransferase, TrmH family, group 3 [Dysgonomonas mossii
DSM 22836]
gi|332885426|gb|EGK05675.1| RNA methyltransferase, TrmH family, group 3 [Dysgonomonas mossii
DSM 22836]
Length = 246
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 106 SMESLSNKRWFPYLDRYKCGDVYLSSS---EVVEALSPYLMEERKERFVNVVKNRSYSVC 162
+++ + N+R + + G + S+ E +E + P+L E+ K+ F+
Sbjct: 50 AVQRVPNERLDRFTRKNHQGVIAFLSAITYEHIEDIIPFLYEQGKDPFI----------- 98
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
LV++G++D N A R+ + GV ++ + + S + S GA + + +
Sbjct: 99 LVLDGITDVRNFGAIARTCEVAGVDAIVIPAKGSVTVNADAIKTSAGALLKIPVCKEQSL 158
Query: 223 RECFNVLRSRGYRI-ATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
L++ G ++ A T G D + +D+S P A V+G E+ GVS++ L ++D
Sbjct: 159 TNAIQFLKNSGIKVVAATERGADDYTA--VDYSGPIAFVMGAEDTGVSNDNLRIADNLVK 216
Query: 282 IPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
IP G + S NVSVAAG+L++ + + +
Sbjct: 217 IPQFGTIGSLNVSVAAGVLIYEVIRQKGIK 246
>gi|374297298|ref|YP_005047489.1| rRNA methylase, putative, group 3 [Clostridium clariflavum DSM
19732]
gi|359826792|gb|AEV69565.1| rRNA methylase, putative, group 3 [Clostridium clariflavum DSM
19732]
Length = 267
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 108 ESLSNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSV------ 161
E K L+ K G++Y +++ ++ E + + V++ +S SV
Sbjct: 59 EVKGGKEILKLLEEEKIGNIYTVPNKLYLEVTD---TENPQGILAVMRKKSVSVESVYDD 115
Query: 162 ---CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN-RHVSMGAEKWLDIE 217
+V++ + D GN+ R+ADA G +V +VS Y +MG+ L I
Sbjct: 116 KNFFVVLDSIQDPGNMGTIIRTADAAGATAV-IVSKGCVDVYNPKVLRATMGSIFHLPIC 174
Query: 218 LWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSD 277
+ E L+ RG + H+ + + +D+++ AI+VGNE G++D LSD
Sbjct: 175 YSENLLETLQSLKDRGIVLCAAHL-RGSKNYFDLNYKGNVAIIVGNEANGITDSVADLSD 233
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHHAV 305
IPM+G +S N SVAAG+L++ +
Sbjct: 234 ELVKIPMEGKSESLNASVAAGLLIYEVL 261
>gi|406933549|gb|EKD68168.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 156
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ LV+ + NV A FR+ADA + +++V ++ + VS+GAE W+ E +
Sbjct: 6 IVLVLPNIRSCHNVGAMFRTADAFNISKLYLVGYTATPPKIQIDKVSLGAETWMPWEKRE 65
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISV----YDMDWSCPTAIVVGNENRGVSDEALSLS 276
+ L+ +GY I ++ + +++D A++VGNE G+ D L +
Sbjct: 66 ELQGLVAELKEQGYAIVGLEKNEESKEIGNLKFEIDDGHAIALIVGNEVDGIDDTILDMC 125
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMH 302
D IPM G +S NVS+AAG+ M+
Sbjct: 126 DHVVHIPMLGKKESLNVSIAAGVAMY 151
>gi|189500046|ref|YP_001959516.1| tRNA/rRNA methyltransferase SpoU [Chlorobium phaeobacteroides BS1]
gi|189495487|gb|ACE04035.1| tRNA/rRNA methyltransferase (SpoU) [Chlorobium phaeobacteroides
BS1]
Length = 180
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 155 KNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWL 214
+ + + V +++ + NV + FR+ADA G+ + + ++ +E ++GA++ +
Sbjct: 23 RKQKHPVTVLLHNIRSMYNVGSVFRTADAAGIDRLIITGYTATPPRKEIDKTALGAQESV 82
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS-CPTAIVVGNENRGVSDEAL 273
D E + P E VL+ G I + ++ D+ P +++GNE G+ D+ L
Sbjct: 83 DWEYYTHPEEILGVLKDSGVTICGLEITENSRPYTDIKKDDFPLCLILGNEVDGIDDDVL 142
Query: 274 SLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
D IP G S NVSVAAG+ ++ V
Sbjct: 143 QFCDHVFEIPQYGTKHSLNVSVAAGVALYEMV 174
>gi|406660059|ref|ZP_11068194.1| Putative TrmH family tRNA/rRNA methyltransferase [Cecembia
lonarensis LW9]
gi|405556193|gb|EKB51143.1| Putative TrmH family tRNA/rRNA methyltransferase [Cecembia
lonarensis LW9]
Length = 257
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ LV++ ++D N A R+A+ GV ++ + S++ + S+GA L I
Sbjct: 110 LILVLDRITDVRNFGAIARTAECAGVHAIVIPEKGSAQINSDAVKTSVGALNHLPIARVK 169
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
L+ G ++ + + +Y D++ PTA+V+G+E G+SDE + SD
Sbjct: 170 NLYYTVKDLKKMGLQVVAVTEKTEQL-MYQADFTLPTALVMGSEEDGISDELMGQSDTAV 228
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDR 308
IP+ G ++S NVSV+AG++++ A+ R
Sbjct: 229 KIPLSGKIESLNVSVSAGVVIYEAIRQR 256
>gi|348173186|ref|ZP_08880080.1| putative tRNA/rRNA methyltransferase [Saccharopolyspora spinosa
NRRL 18395]
Length = 267
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPR 223
V+EG+ D N+ A FR+A ALG+ V + + S YR + VSMG + +
Sbjct: 123 VLEGIGDHENLGALFRNAAALGIDGVLLGAGCSDPLYRRSVRVSMGHVLRVPFAHLTSWP 182
Query: 224 ECFNVLRSRGYRIATTHVGMDAISVYDMDWS-CPTAIVVGNENRGVSDEALSLSDLRCSI 282
E +LR G+RIA D+ S+ D + A+++G+E G++DEA+ +++ I
Sbjct: 183 EDLKLLRDNGFRIAALTPRADSKSLRDAELDRGSVAVLLGSEGPGLTDEAIEAAEVAVRI 242
Query: 283 PMKGMVDSFNVSVAAGILMH 302
PM VDS NV+ A I H
Sbjct: 243 PMVSGVDSLNVATAGAITFH 262
>gi|336398429|ref|ZP_08579229.1| tRNA/rRNA methyltransferase (SpoU) [Prevotella multisaccharivorax
DSM 17128]
gi|336068165|gb|EGN56799.1| tRNA/rRNA methyltransferase (SpoU) [Prevotella multisaccharivorax
DSM 17128]
Length = 270
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDS-SKRYRENRHVSMGAEKWLDIELWDA 221
+V+E + GN+ A RSADA +V V CD + Y N S + +
Sbjct: 122 VVLERVEKPGNLGAVLRSADAAATDAVIV--CDPLTDLYNPNLIRSSIGAVFTVPTVACT 179
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
EC L+ +I T + D+ YD D C TAIV+G E+ G+++ +D
Sbjct: 180 SEECVAFLKKNAIQILTAQL-QDSRLYYDTDMQCGTAIVMGTESTGLTNTWREAADAHIR 238
Query: 282 IPMKGMVDSFNVSVAAGILMHHAVCDRA 309
IPM+G +DS NVSV+A IL+ AV RA
Sbjct: 239 IPMRGQLDSLNVSVSAAILLFEAVRQRA 266
>gi|393784992|ref|ZP_10373148.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides salyersiae
CL02T12C01]
gi|392663797|gb|EIY57343.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides salyersiae
CL02T12C01]
Length = 247
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K + ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEEGKN-----------PIFVMLDGITDVRNFGAIARTCECAAVDAVIIPARG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM---D 252
S + S GA L + + + L+ G+RI D YD D
Sbjct: 133 SVSVNADAMKTSAGALHTLPVCREQSLKSTLQYLKDSGFRIVAATEKGD----YDYTKGD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS E L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDTGVSYENLALCDEWVKIPMLGSIESLNVSVAAGILIYEAVKQR 244
>gi|255535982|ref|YP_003096353.1| rRNA methylase [Flavobacteriaceae bacterium 3519-10]
gi|255342178|gb|ACU08291.1| rRNA methylase [Flavobacteriaceae bacterium 3519-10]
Length = 265
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
E ++ + P L EE K F+ L+++ L+D N A R+A+ +GV ++ +
Sbjct: 97 ESIQDVLPQLFEEGKTPFL-----------LILDRLTDVRNFGAICRTAECVGVHAIILP 145
Query: 193 SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
++ + S GA L I + L+ G ++ + + +YD+D
Sbjct: 146 EKGAAPINSDAIKTSAGAIYNLRICKEKNLAHAVDFLQQSGLQVFSASEKAQKL-IYDVD 204
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
++ P AIV+GNE G+S E L SD + +P++G S NVSVA G +++ AV
Sbjct: 205 FTQPCAIVMGNEETGISKEVLHHSDEKIKLPIEGKTQSLNVSVACGAILYEAV 257
>gi|119963510|ref|YP_947871.1| TrmH family RNA methyltransferase [Arthrobacter aurescens TC1]
gi|403527336|ref|YP_006662223.1| tRNA/rRNA methyltransferase [Arthrobacter sp. Rue61a]
gi|119950369|gb|ABM09280.1| putative RNA methyltransferase, TrmH family [Arthrobacter aurescens
TC1]
gi|403229763|gb|AFR29185.1| putative tRNA/rRNA methyltransferase [Arthrobacter sp. Rue61a]
Length = 269
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE---KWLDIELWD 220
V+E + D NV A FRSA ALGV +V V YR + VSMG W +E W
Sbjct: 123 VLEDIVDHTNVGAIFRSAAALGVDAVLVSPRCGDPLYRRSVRVSMGTVFQVPWARLESWP 182
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDW-SCPT-AIVVGNENRGVSDEALSLSDL 278
+ L+ +G+ +A + +A+ + D+ P A+V+G E G+S+E L+ DL
Sbjct: 183 ---DHLAQLKEQGFTVAAMELTDNAVDLDDLAARKIPKLALVLGTEGAGMSEETLAAVDL 239
Query: 279 RCSIPMKGMVDSFNVSVAAGI 299
IPM+ VDS NV+ A+ +
Sbjct: 240 AVKIPMRAGVDSLNVAAASAV 260
>gi|297545334|ref|YP_003677636.1| TrmH family RNA methyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843109|gb|ADH61625.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 249
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
VE L Y E++KE+ L+++ ++D N+ A RSA+A GV + +
Sbjct: 84 VEDLLEY-AEQKKEK----------PFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKR 132
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
+ S GA + + I L+ RG I T V S ++D+
Sbjct: 133 RAVGVNATVVKTSAGAVEHMKIAKVSNINNTIRNLKERGLWIVGTDVN-GGKSFEEIDYD 191
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
P A+V+GNE +GVS L D IPMKG ++S N SVAA +L++ V R +
Sbjct: 192 FPVALVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASLLVYQVVSKRKDK 248
>gi|225026975|ref|ZP_03716167.1| hypothetical protein EUBHAL_01231 [Eubacterium hallii DSM 3353]
gi|224955711|gb|EEG36920.1| RNA methyltransferase, TrmH family [Eubacterium hallii DSM 3353]
Length = 257
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSV----HVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
++E L D GN+ R+A+ GV + V + K R +MGA + +
Sbjct: 111 FLLENLQDPGNLGTIVRTAEGAGVTGIIMNRETVDIYNPKVIRS----TMGAIFRVPFVI 166
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
D+ E L+ G + H+ D Y D+ +A ++GNE G++DE +L+D
Sbjct: 167 ADSLPEVIFQLKQNGVSVYAGHLKGDVF--YKQDYRDGSAFLIGNEGNGLTDEITALADY 224
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ IPMKG V+S N +V+A ILM+ + R
Sbjct: 225 KIKIPMKGKVESLNAAVSATILMYETMRQR 254
>gi|319901728|ref|YP_004161456.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides helcogenes
P 36-108]
gi|319416759|gb|ADV43870.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides helcogenes
P 36-108]
Length = 246
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L+P+L E+ K + ++++G++D N A R+ + V +V + + +
Sbjct: 84 EDLTPFLFEQGKN-----------PLFVMLDGITDVRNFGAIARTCECAAVDAVIIPAKN 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + +E L++ G+ I D YD D
Sbjct: 133 SVSVNADAVKTSAGALHTLPVCREQNLKETLQFLKNSGFHIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E++GVS + L+L D IPM G ++S NVSVAAG+L++ AV R
Sbjct: 189 YTGPMCIIMGAEDKGVSYDNLALCDEWVKIPMLGTIESLNVSVAAGVLIYEAVKQR 244
>gi|440781727|ref|ZP_20959955.1| RNA methyltransferase [Clostridium pasteurianum DSM 525]
gi|440220445|gb|ELP59652.1| RNA methyltransferase [Clostridium pasteurianum DSM 525]
Length = 260
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 16/163 (9%)
Query: 153 VVKNRSYSV------CLVVEGLSDFGNVSATFRSADALGVQSVHV----VSCDSSKRYRE 202
VV NR +V ++ + + D GN+ R+A+A G + + V V +SK R
Sbjct: 99 VVSNREINVDYDEGFYILADRVQDPGNMGTIIRTANAAGAKGIIVTKGSVDIYNSKTLRS 158
Query: 203 NRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVG 262
+MG+ + I + D + +G++I + + + YD+D + I VG
Sbjct: 159 ----TMGSIFKIPI-IIDEDLVHIKEFKEQGFKIVVSSLDTKN-NFYDIDLTGKIIIAVG 212
Query: 263 NENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
NE G+S+E +SD+R IPM G +S NV +AAGI+M AV
Sbjct: 213 NEGSGISEEIYGISDVRVKIPMPGNTESLNVGIAAGIMMFEAV 255
>gi|189502158|ref|YP_001957875.1| hypothetical protein Aasi_0766 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497599|gb|ACE06146.1| hypothetical protein Aasi_0766 [Candidatus Amoebophilus asiaticus
5a2]
Length = 177
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
+ F N +K + LV++ L N+ A FR ADA ++ +++ + +RE +
Sbjct: 15 KEFKNALK---IPLILVLDNLRSMHNIGAAFRIADAFLLEKIYLCGITAQPPHREIHKTA 71
Query: 208 MGAEKWLDIELWDAPRECFNVLRS---RGYRIATTHVGMDAISV--YDMDWSCPTAIVVG 262
+GAE+ + +W+ + + +L+S +GY I ++I + Y ++ + A+V G
Sbjct: 72 LGAEETV---IWEYVPDTYTLLQSLKTKGYLIVALEQTDESIPLQSYQINSNNKCALVFG 128
Query: 263 NENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
NE G+ +EAL+ DL IP G S NVSV+ GI + D+
Sbjct: 129 NEVFGIQEEALAACDLALEIPQHGTKHSLNVSVSMGIAIWELTKDK 174
>gi|148655189|ref|YP_001275394.1| tRNA/rRNA methyltransferase SpoU [Roseiflexus sp. RS-1]
gi|148567299|gb|ABQ89444.1| tRNA/rRNA methyltransferase (SpoU) [Roseiflexus sp. RS-1]
Length = 262
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 26/160 (16%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQ----SVHVVSCDSSKRYRENRHVSMGAEKWLDI 216
+ LV++ + D GN+ RSA+A+GV SV V + K R +MGA L +
Sbjct: 112 LLLVIDAVQDPGNLGTLLRSAEAVGVAQVLCSVGTVDLYAPKVVRS----AMGAHFRLAM 167
Query: 217 EL---WDAPRECFNVLRSRGYRIATT-HV-GMDA---ISVYDMDWSCPTAIVVGNENRGV 268
E WDA G R+A+ HV D + Y DW P+A++VGNE G+
Sbjct: 168 EQDLSWDA----------IGERLASVDHVYAADPEARMPYYAADWRQPSALLVGNEAHGL 217
Query: 269 SDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
SD A L+ + +IPM+G +S NV+VAA +++ A+ R
Sbjct: 218 SDAARRLATKQIAIPMRGGTESLNVAVAASVILFEALRQR 257
>gi|224014732|ref|XP_002297028.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968408|gb|EED86756.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 542
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 133 EVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVV 192
+ ++ L+PY+ R ER V+ R+ + E S+ NV A R+ D+ G+Q V V+
Sbjct: 277 QSIDILTPYVQPRRLERIDEVLNQRTRHTRFLFENPSNPSNVWACLRTLDSFGIQYVDVI 336
Query: 193 ------SCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSR-GYRIATTHVGMDA 245
++ + +MG+ W+ + + + LR I + + +
Sbjct: 337 IHSDSYQGKAAVNQKRGMRTAMGSACWMTLRQFGSIEAAITSLREEEDCLIYASDLNPAS 396
Query: 246 ISVYDMDWSC-----------------PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMV 288
+ V D++W P IV+GNE RG+SD+ L+D +PM G
Sbjct: 397 MDVRDLNWDVDYSSGGNADSDQQKEQRPICIVMGNEERGISDKMRELADETFYLPMCGFA 456
Query: 289 DSFNVSVAAGILMHH--AVCDRA 309
+SFN+SVA I + + AV R
Sbjct: 457 ESFNLSVATAITLAYMSAVSGRG 479
>gi|167753257|ref|ZP_02425384.1| hypothetical protein ALIPUT_01529 [Alistipes putredinis DSM 17216]
gi|167659188|gb|EDS03318.1| RNA methyltransferase, TrmH family, group 3 [Alistipes putredinis
DSM 17216]
Length = 243
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 8/178 (4%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV +SP E + V ++ + + L +G++D N A RSA+ G + V
Sbjct: 69 VVAQISPIGYVELNDILERVPEDETPLIVLF-DGVTDVRNFGAIARSAECAGAHGLIVPL 127
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAIS---VYD 250
+++ E S GA + + + R L++ GY++ VG S +YD
Sbjct: 128 KNAAPVNSEAIRSSAGALTAIPVCRVGSIRNTLKALQAEGYQV----VGATEKSRKLLYD 183
Query: 251 MDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D+ PTA+V+G E+ G+S E L L D + +IPM G ++S NVS AA +L+ V R
Sbjct: 184 ADFRKPTALVMGAEDTGISKEVLKLCDEQLAIPMIGKIESLNVSAAAAVLLFEIVRQR 241
>gi|406959530|gb|EKD86850.1| tRNA/rRNA methyltransferase [uncultured bacterium]
Length = 177
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 149 RFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM 208
+F + KN Y +V++ + D N+ A FR ADA+ + V + + + S+
Sbjct: 17 KFKKIKKNPIY---IVLDNVLDTYNIGAIFRLADAVAAEKVIICGQSEIPPHTRIKKASI 73
Query: 209 GAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV-YD-MDWSCPTAIVVGNENR 266
+W+ E + +E + LR + + +D +V YD D+S P A+VVG+E
Sbjct: 74 NTTEWVSWEYASSAKEAIDQLRLTIDHLQVVAIELDKRAVPYDKFDYSFPIALVVGHETT 133
Query: 267 GVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
GVS E L +SD +PM G+ S NV V+ GI+++
Sbjct: 134 GVSKEVLDVSDGIVELPMSGVNISLNVMVSLGIVLYE 170
>gi|313893275|ref|ZP_07826850.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp. oral
taxon 158 str. F0412]
gi|313442171|gb|EFR60588.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp. oral
taxon 158 str. F0412]
Length = 243
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Query: 156 NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLD 215
N + ++ +G+ D N+ A R+A+ +G +V + ++ S GA + +
Sbjct: 89 NHEVPLLILTDGVEDPHNMGAIIRTAECVGATAVLIPKRHNAPINATVAKTSAGAIEQIP 148
Query: 216 IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSL 275
+ + L+ +G+ + H+ D ++Y+ D + PT IV+GNE +G+S
Sbjct: 149 LVQVGNVAQTIKQLQKQGFWVMGAHMEGDR-TLYEADMTIPTVIVIGNEGKGISRVVKEA 207
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D +IPM G ++S N SVAA +LM+ AV R +
Sbjct: 208 CDFLVTIPMYGNLNSLNASVAAAVLMYEAVRQRQAK 243
>gi|160891918|ref|ZP_02072921.1| hypothetical protein BACUNI_04376 [Bacteroides uniformis ATCC 8492]
gi|270296416|ref|ZP_06202616.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. D20]
gi|317480388|ref|ZP_07939488.1| RNA methyltransferase [Bacteroides sp. 4_1_36]
gi|423303236|ref|ZP_17281235.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides uniformis
CL03T00C23]
gi|423308043|ref|ZP_17286033.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides uniformis
CL03T12C37]
gi|156858396|gb|EDO51827.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides uniformis
ATCC 8492]
gi|270273820|gb|EFA19682.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. D20]
gi|316903466|gb|EFV25320.1| RNA methyltransferase [Bacteroides sp. 4_1_36]
gi|392688466|gb|EIY81751.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides uniformis
CL03T00C23]
gi|392689028|gb|EIY82311.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides uniformis
CL03T12C37]
Length = 246
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K + ++++G++D N A R+ + V +V + + +
Sbjct: 84 EDLVPFLFEQGKN-----------PLFVMLDGITDVRNFGAIARTCECAAVDAVIIPARN 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + +E L++ G+ I D YD D
Sbjct: 133 SVSVNADAMKTSAGALHTLPVCREHSLKETLQFLKNSGFHIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E++GVS + L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDKGVSYDNLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|398346654|ref|ZP_10531357.1| rRNA methylase [Leptospira broomii str. 5399]
Length = 268
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
S LVVEG+ GN+ R+A+ G +V V D + + ++
Sbjct: 121 SPILVVEGVEKPGNLGTILRTAEGAGFNTVLV--ADPKLDLLNPNVIRSSTGTLFTLNVY 178
Query: 220 DA-PRECFNVLRSRGYRIATTHVGMDAISVY-DMDWSCPTAIVVGNENRGVSDEALSLSD 277
A ++ + L+ GY+I V +A S+Y D D A+V G+E G+S+ A S SD
Sbjct: 179 QALIQDLYPALKKEGYKIVA--VTPEAKSIYWDSDLQGKIALVFGSEQYGLSEFARSKSD 236
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHHAV 305
L S+PMKG DS N++++AGILM+ +
Sbjct: 237 LYISLPMKGHADSLNLAMSAGILMYEVL 264
>gi|322435978|ref|YP_004218190.1| tRNA/rRNA methyltransferase SpoU [Granulicella tundricola MP5ACTX9]
gi|321163705|gb|ADW69410.1| tRNA/rRNA methyltransferase (SpoU) [Granulicella tundricola
MP5ACTX9]
Length = 263
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Query: 152 NVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE 211
+++ ++ L+ GL D GN+ RSA+A G V S ++ S G+
Sbjct: 106 KMLEGPGEALILIAVGLQDPGNLGTLIRSAEAFGATGVLTTPGTVSPWNQKAMRASAGSV 165
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
L + + A + L +G ++ + DA+++ + D + +AI++GNE G++++
Sbjct: 166 FRLPVAV--ATPDAMETLEQQGIKL-LAAMKDDAVAIGEADLTVGSAILIGNEGAGLNED 222
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
L L+D R +IP G V+S N +VA IL++ A R R
Sbjct: 223 WLRLADQRVTIPCPGWVESLNAAVAGSILLYEASRQRGAR 262
>gi|29346770|ref|NP_810273.1| tRNA/rRNA methyltransferase [Bacteroides thetaiotaomicron VPI-5482]
gi|298386583|ref|ZP_06996139.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp.
1_1_14]
gi|383121262|ref|ZP_09941977.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. 1_1_6]
gi|29338667|gb|AAO76467.1| tRNA/rRNA methyltransferase [Bacteroides thetaiotaomicron VPI-5482]
gi|251838001|gb|EES66089.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp. 1_1_6]
gi|298260960|gb|EFI03828.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides sp.
1_1_14]
gi|375342853|gb|AFA54794.1| tRNA/rRNA methyltransferase [uncultured Bacteroides sp. SMG1]
gi|375342941|gb|AFA54879.1| tRNA/rRNA methyltransferase [uncultured Bacteroides sp. SMG6]
Length = 247
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K F ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEQGKNPFF-----------VMLDGITDVRNFGAIARTCECAAVDAVIIPARG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + R L+ G+RI D YD D
Sbjct: 133 SVSVNADAMKTSAGALHTLPVCREQNLRATLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS + L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDTGVSYDHLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|383776857|ref|YP_005461423.1| putative rRNA methylase [Actinoplanes missouriensis 431]
gi|381370089|dbj|BAL86907.1| putative rRNA methylase [Actinoplanes missouriensis 431]
Length = 264
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMG---AEKWLDIELWD 220
V+EGL+ N+ A FRSA ALG+ +V + + YR VSMG A + E W
Sbjct: 120 VLEGLNTHTNLGALFRSAAALGIDAVVLSPNCADPLYRRAVRVSMGEVFAIPYAKSENWP 179
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVSDEALSLSDL 278
E +R G+ + DA+++ D+ + A+++G E G++ AL SD+
Sbjct: 180 ---ETLATIREAGFTLLAMTPADDAVALQDLTPAQRERPALLLGAEGPGLTPHALRASDV 236
Query: 279 RCSIPMKGMVDSFNVSVAAGI 299
R +IPM+ VDS NV+ AA I
Sbjct: 237 RVAIPMRNGVDSLNVATAAAI 257
>gi|84496489|ref|ZP_00995343.1| rRNA methyltransferase [Janibacter sp. HTCC2649]
gi|84383257|gb|EAP99138.1| rRNA methyltransferase [Janibacter sp. HTCC2649]
Length = 269
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 162 CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA---EKWLDIEL 218
LV+E + D NV A FRSA ALG+ +V V + YR VSMG W I+
Sbjct: 122 VLVIEDVVDHTNVGAVFRSAAALGMDAVLVTPRCADPLYRRAIRVSMGTVFQVPWTRIDP 181
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVSDEALSLS 276
W PR N+LR G+ +A + DA+ + ++ + P A+V+G E G+S + +
Sbjct: 182 W--PR-GINLLRDSGFTVAALALSDDAVGLDELAANPPERLALVLGTEGDGLSRRTVEGA 238
Query: 277 DLRCSIPMKGMVDSFN 292
D+ IPM G VDS N
Sbjct: 239 DVVVKIPMAGGVDSLN 254
>gi|238019168|ref|ZP_04599594.1| hypothetical protein VEIDISOL_01031 [Veillonella dispar ATCC 17748]
gi|416999155|ref|ZP_11939824.1| RNA methyltransferase, TrmH family, group 3 [Veillonella parvula
ACS-068-V-Sch12]
gi|237863867|gb|EEP65157.1| hypothetical protein VEIDISOL_01031 [Veillonella dispar ATCC 17748]
gi|333977308|gb|EGL78167.1| RNA methyltransferase, TrmH family, group 3 [Veillonella parvula
ACS-068-V-Sch12]
Length = 243
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Query: 156 NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLD 215
N + ++ +G+ D N+ A R+A+ +G +V + ++ S GA + +
Sbjct: 89 NHDVPLLILTDGVEDPHNMGAIIRTAECVGATAVLIPKRHNAPINATVAKTSAGAIEQIP 148
Query: 216 IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSL 275
+ + L+ +G+ + H+ D ++Y+ D + PT IV+GNE +G+S
Sbjct: 149 LVQVGNVAQTIKQLQKQGFWVMGAHMEGDR-TLYEADMTIPTVIVIGNEGKGISRVVKEA 207
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D +IPM G ++S N SVAA +LM+ AV R +
Sbjct: 208 CDFLVTIPMYGNLNSLNASVAAAVLMYEAVRQRQAK 243
>gi|325279820|ref|YP_004252362.1| tRNA/rRNA methyltransferase (SpoU) [Odoribacter splanchnicus DSM
20712]
gi|324311629|gb|ADY32182.1| tRNA/rRNA methyltransferase (SpoU) [Odoribacter splanchnicus DSM
20712]
Length = 184
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
V ++++ + NV + FR++DA ++ + + S+ RE ++GAE +D E
Sbjct: 28 VVILLDHVRSQNNVGSVFRTSDAFRIEKIFLCGITSTPENREVHKTALGAEDAVDWEYVK 87
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT--AIVVGNENRGVSDEALSLSDL 278
E + L+ GYRI + S+ + S A++ GNE +GV E + LSD
Sbjct: 88 DTTEAVDRLKKEGYRIFAIEQAENTTSLENFSLSPGQKYALIFGNEVKGVQQEVIDLSDG 147
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHAVC 306
IP G SFN+SV GI++ +
Sbjct: 148 CIEIPQFGTKHSFNISVTVGIVLWQIIA 175
>gi|345018553|ref|YP_004820906.1| TrmH family RNA methyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033896|gb|AEM79622.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 247
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E+RKE+ L+++ ++D N+ A RSA+A GV + + +
Sbjct: 90 EQRKEK----------PFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATV 139
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S GA + + I L+ RG I T V S ++D+ P AIV+G+
Sbjct: 140 VKTSAGAVEHMRIAKVSNINNTIRGLKERGLWIVGTDVNAGK-SFEELDYDFPLAIVIGS 198
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
E +GVS L D IPMKG ++S N SVAA IL++ V R +
Sbjct: 199 EGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVVSKRKGK 246
>gi|392939596|ref|ZP_10305240.1| rRNA methylase, putative, group 3 [Thermoanaerobacter siderophilus
SR4]
gi|392291346|gb|EIV99789.1| rRNA methylase, putative, group 3 [Thermoanaerobacter siderophilus
SR4]
Length = 247
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E+RKE+ L+++ ++D N+ A RSA+A GV + + +
Sbjct: 90 EQRKEK----------PFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATV 139
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S GA + + I L+ RG I T V S ++D+ P AIV+G+
Sbjct: 140 VKTSAGAVEHMRIAKVSNINNTIRGLKERGLWIVGTDVNAGK-SFEELDYDFPLAIVIGS 198
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
E +GVS L D IPMKG ++S N SVAA IL++ V R +
Sbjct: 199 EGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVVSKRKGK 246
>gi|429759535|ref|ZP_19292033.1| RNA methyltransferase, TrmH family, group 3 [Veillonella atypica
KON]
gi|429179496|gb|EKY20743.1| RNA methyltransferase, TrmH family, group 3 [Veillonella atypica
KON]
Length = 245
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 156 NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLD 215
N + ++ +G+ D N+ A R+A+ +G +V + ++ S GA + +
Sbjct: 89 NHENPLLILTDGVEDPHNMGAIIRTAECVGATAVLIPKRHNAPINATVAKTSAGAVEQIP 148
Query: 216 IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSL 275
+ + L+ +G+ + H+ D ++Y+ D + PT +V+GNE +G+S
Sbjct: 149 LVQVGNVTQTIKQLQKQGFWVLGAHMEGDR-TLYETDLTIPTVLVIGNEGKGISRVVKEA 207
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
D +IPM G ++S N SVAA ILM+ AV R ++
Sbjct: 208 CDFLVTIPMYGNLNSLNASVAAAILMYEAVRQRTMKV 244
>gi|399888250|ref|ZP_10774127.1| RNA methyltransferase [Clostridium arbusti SL206]
Length = 261
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
++ + + D GN+ R+A+A G + + V + +MG+ + + + D
Sbjct: 116 ILADKVQDPGNMGTIIRTANAAGAKGIIVTKGTVDIYNDKTLRSTMGSIFKIPV-IIDED 174
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
L+ +G+++ + + D + YD S T I VGNE G+S+E ++SD R I
Sbjct: 175 LSYIAKLKQQGFKLIVSSLDTDN-NFYDASLSGKTIIAVGNEGSGISEEIYNISDERVKI 233
Query: 283 PMKGMVDSFNVSVAAGILMHHAV 305
PM G +S NV +AAGI+M AV
Sbjct: 234 PMPGSAESLNVGIAAGIMMFEAV 256
>gi|224535475|ref|ZP_03676014.1| hypothetical protein BACCELL_00338 [Bacteroides cellulosilyticus
DSM 14838]
gi|423222841|ref|ZP_17209311.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides
cellulosilyticus CL02T12C19]
gi|224522941|gb|EEF92046.1| hypothetical protein BACCELL_00338 [Bacteroides cellulosilyticus
DSM 14838]
gi|392640779|gb|EIY34571.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides
cellulosilyticus CL02T12C19]
Length = 246
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K + ++++G++D N A R+ + V +V + +
Sbjct: 84 EDLVPFLFEEGKN-----------PLFVMLDGVTDVRNFGAIARTCECAAVDAVIIPAKG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + L+ G+RI D YD D
Sbjct: 133 SVTVNADAMKTSAGALHVLPVCREQNLKVTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E++GVS E L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDKGVSYENLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|309812910|ref|ZP_07706638.1| RNA methyltransferase, TrmH family [Dermacoccus sp. Ellin185]
gi|308432982|gb|EFP56886.1| RNA methyltransferase, TrmH family [Dermacoccus sp. Ellin185]
Length = 270
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ LV EG+ GN+ A R+ADA+GV V ++ D + V + +
Sbjct: 121 LLLVAEGVEKPGNLGAMLRTADAVGVDGV--IAADPVTDWGNPNVVRGSKGTVFSVPVAA 178
Query: 221 APR-ECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
AP E LR + T D + D+D S P A+ VG E G++DE L + R
Sbjct: 179 APTSETLEWLRDNDIPLIATTPDTDVMHT-DIDLSGPVAVAVGTEKYGLTDEMLGAATSR 237
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
IPM G V+S NV+ +A I+++ A+ R R
Sbjct: 238 VRIPMVGQVNSLNVATSAAIVLYEAMRQRGVR 269
>gi|431797543|ref|YP_007224447.1| rRNA methylase [Echinicola vietnamensis DSM 17526]
gi|430788308|gb|AGA78437.1| rRNA methylase, putative, group 3 [Echinicola vietnamensis DSM
17526]
Length = 258
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ LV++ ++D N A R+A+ GV ++ + +++ + S GA +L +
Sbjct: 110 LVLVLDRITDVRNFGAIARTAECAGVHAIVIPEKGAAQINSDAVKTSAGALNFLPVCRAK 169
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
L+ G I + + +YD D++ PTAI++G+E G+S++ ++LSD
Sbjct: 170 NLHFMVKDLKKMGLNIVSCTEKTER-KMYDADFTVPTAIIMGSEEDGISEDLMALSDEFV 228
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDR 308
SIPM G ++S NVSVA+G+L++ + R
Sbjct: 229 SIPMAGNIESLNVSVASGVLIYEIIRQR 256
>gi|326391116|ref|ZP_08212662.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
ethanolicus JW 200]
gi|325992815|gb|EGD51261.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
ethanolicus JW 200]
Length = 247
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
E+RKE+ L+++ ++D N+ A RSA+A GV + + +
Sbjct: 90 EQRKEK----------PFLLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATV 139
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S GA + + I L+ RG I T V S ++D+ P AIV+G+
Sbjct: 140 VKTSAGAVEHMRIAKVSNINNTIRGLKERGLWIVGTDVNAGK-SFEELDYDFPLAIVIGS 198
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
E +GVS L D IPMKG ++S N SVAA IL++ V R +
Sbjct: 199 EGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVVSKRKGK 246
>gi|375102687|ref|ZP_09748950.1| rRNA methylase [Saccharomonospora cyanea NA-134]
gi|374663419|gb|EHR63297.1| rRNA methylase [Saccharomonospora cyanea NA-134]
Length = 267
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
V V+EG++D N+ A FR+A ALGV V + + + YR + VSMG L +
Sbjct: 120 VLAVLEGVNDHENLGAMFRNAAALGVDGVLLGAGCADPLYRRSVRVSMG--HVLRVPFTS 177
Query: 221 APR--ECFNVLRSRGYRIATTHVGMDAISVYDMDWSC--PTAIVVGNENRGVSDEALSLS 276
P + LR RG+ +A DAI++ D+ S A+++G+E G+S EAL +
Sbjct: 178 VPAWPDAVEELRRRGFHVAALTPRSDAIALRDVRRSGFDRIALLLGSEGHGLSQEALDAA 237
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHH 303
D IPM VDS NV+ AA + +
Sbjct: 238 DSAVRIPMASGVDSLNVATAAAVAFYE 264
>gi|398344645|ref|ZP_10529348.1| rRNA methylase [Leptospira inadai serovar Lyme str. 10]
Length = 268
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
S L+VEG+ GN+ R+A+ G +V V D + + ++
Sbjct: 121 SPILIVEGVEKPGNLGTILRTAEGAGFNTVLV--ADPKLDLLNPNVIRSSTGTLFTLNVY 178
Query: 220 DA-PRECFNVLRSRGYRIATTHVGMDAISVY-DMDWSCPTAIVVGNENRGVSDEALSLSD 277
A ++ + L+ GY+I V +A SVY D D A+V G+E G+S+ A S SD
Sbjct: 179 QALIQDLYPSLKKEGYKIVA--VTPEAKSVYWDSDLKGKVALVFGSEQYGLSEFARSKSD 236
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHHAV 305
L S+PMKG DS N++++AGILM+ +
Sbjct: 237 LYISLPMKGQADSLNLAMSAGILMYEVL 264
>gi|302874885|ref|YP_003843518.1| tRNA/rRNA methyltransferase SpoU [Clostridium cellulovorans 743B]
gi|307690498|ref|ZP_07632944.1| RNA methyltransferase, TrmH family [Clostridium cellulovorans 743B]
gi|302577742|gb|ADL51754.1| tRNA/rRNA methyltransferase (SpoU) [Clostridium cellulovorans 743B]
Length = 259
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 13/188 (6%)
Query: 125 GDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSV------CLVVEGLSDFGNVSATF 178
++Y+ S++ + +S E + + VV+N+ ++V + + + D GN+
Sbjct: 73 ANIYIIPSQIFKTIST---TETPQGIIAVVENKEFAVKNEKGFYIYADKVQDPGNMGTII 129
Query: 179 RSADALGVQSVHVVSCDSSKRYRENR-HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIA 237
R+A A G V + S + Y E +MG+ + + + D L+++G+++
Sbjct: 130 RTAHASGALGV-IYSQGTVDIYNEKTLRSTMGSIFRIPV-ILDKDMNKLKELKAQGFKLI 187
Query: 238 TTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAA 297
+ + + + +D+D S + I VGNE GVSDE +LSD + IPM G +S NV+VAA
Sbjct: 188 VSSLDTNK-NFFDVDLSQMSIIAVGNEGNGVSDELYNLSDEKVKIPMPGGAESLNVAVAA 246
Query: 298 GILMHHAV 305
I+ AV
Sbjct: 247 SIMAFEAV 254
>gi|303231482|ref|ZP_07318212.1| RNA methyltransferase, TrmH family, group 3 [Veillonella atypica
ACS-049-V-Sch6]
gi|302513825|gb|EFL55837.1| RNA methyltransferase, TrmH family, group 3 [Veillonella atypica
ACS-049-V-Sch6]
Length = 245
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 156 NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLD 215
N + ++ +G+ D N+ A R+A+ +G +V + ++ S GA + +
Sbjct: 89 NHENPLLILTDGVEDPHNMGAIIRTAECVGATAVLIPKRHNAPINATVAKTSAGAVEQIS 148
Query: 216 IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSL 275
+ + L+ +G+ + H+ D ++Y+ D + PT +V+GNE +G+S
Sbjct: 149 LVQVGNVTQTIKQLQKQGFWVLGAHMEGDR-TLYEADLTIPTVLVIGNEGKGISRVVKEA 207
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
D +IPM G ++S N SVAA ILM+ AV R ++
Sbjct: 208 CDFLVTIPMYGNLNSLNASVAAAILMYEAVRQRTMKV 244
>gi|42523228|ref|NP_968608.1| tRNA/rRNA methyltransferase [Bdellovibrio bacteriovorus HD100]
gi|39575433|emb|CAE79601.1| putative tRNA/rRNA methyltransferase [Bdellovibrio bacteriovorus
HD100]
Length = 258
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ V++ + NV + FR+A+ LG + +++ + +MG +++L E +
Sbjct: 108 LVFVLDNIRSAFNVGSIFRTAECLGAEKIYLCGYTPLPTQWKVEKTAMGTQEYLAWE--E 165
Query: 221 APR--ECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
AP+ EC L+ GYRI A +++ S PTA V+GNE G+ E L + D
Sbjct: 166 APKLLECLEELKDEGYRIVALETAASASDLFEKFESEPTAFVLGNERFGLDPEVLKIIDE 225
Query: 279 RCSIPMKGMVDSFNVSVAAGI 299
IP++G +S NV V A +
Sbjct: 226 VRIIPLRGRKNSLNVGVTAAV 246
>gi|298706974|emb|CBJ29793.1| tRNA/rRNA methyltransferase (SpoU) [Ectocarpus siliculosus]
Length = 354
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE---KWL 214
+ L+ +G+ D GN+ R+A LG +V + + SMGA L
Sbjct: 174 TLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSL 233
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA-L 273
+E W +E ++R+RG R+ G +S +D DW+ P+A+VVG E RG+SD A L
Sbjct: 234 RLESW---QEVVELMRARGIRMYAADGGAR-LSHFDADWTSPSALVVGAEARGLSDAARL 289
Query: 274 SLSD---LRCSIPMKGMVDSFNVSVAAGILMHHA 304
L S+P++G V+S N +VA I++ A
Sbjct: 290 ELESGGIAGVSVPLEGGVESLNAAVAGAIVLGEA 323
>gi|237718363|ref|ZP_04548844.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_2_4]
gi|229452296|gb|EEO58087.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_2_4]
Length = 247
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K F ++++G++D N A R+ + V +V +
Sbjct: 84 EDLVPFLFEQGKNPFF-----------VMLDGVTDVRNFGAIARTCECAAVDAVIIPVRG 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + R L+ G+RI D YD D
Sbjct: 133 SVSVNADAVKTSAGALHTLPVCREQNLRSTLQYLKDSGFRIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E+ GVS E L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPLCIIMGAEDTGVSYENLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|401680120|ref|ZP_10812044.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp. ACP1]
gi|400219247|gb|EJO50118.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp. ACP1]
Length = 245
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 156 NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLD 215
N + ++ +G+ D N+ A R+A+ +G +V + ++ S GA + +
Sbjct: 89 NHENPLLILTDGVEDPHNMGAIIRTAECVGATAVLIPKRHNAPINATVAKTSAGAVEQIP 148
Query: 216 IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSL 275
+ + L+ +G+ + H+ D ++Y+ D + PT +V+GNE +G+S
Sbjct: 149 LVQVGNVTQTIKQLQKQGFWVLGAHMEGDR-TLYEADLTIPTVLVIGNEGKGISRVVKEA 207
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
D +IPM G ++S N SVAA ILM+ AV R ++
Sbjct: 208 CDFLVTIPMYGNLNSLNASVAAAILMYEAVRQRTMKV 244
>gi|303228929|ref|ZP_07315739.1| RNA methyltransferase, TrmH family, group 3 [Veillonella atypica
ACS-134-V-Col7a]
gi|302516343|gb|EFL58275.1| RNA methyltransferase, TrmH family, group 3 [Veillonella atypica
ACS-134-V-Col7a]
Length = 245
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 156 NRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLD 215
N + ++ +G+ D N+ A R+A+ +G +V + ++ S GA + +
Sbjct: 89 NHENPLLILTDGVEDPHNMGAIIRTAECVGATAVLIPKRHNAPINATVAKTSAGAVEQIP 148
Query: 216 IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSL 275
+ + L+ +G+ + H+ D ++Y+ D + PT +V+GNE +G+S
Sbjct: 149 LVQVGNVTQTIKQLQKQGFWVLGAHMEGDR-TLYEADLTIPTVLVIGNEGKGISRVVKEA 207
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRL 312
D +IPM G ++S N SVAA ILM+ AV R ++
Sbjct: 208 CDFLVTIPMYGNLNSLNASVAAAILMYEAVRQRTMKV 244
>gi|386820899|ref|ZP_10108115.1| rRNA methylase, putative, group 3 [Joostella marina DSM 19592]
gi|386426005|gb|EIJ39835.1| rRNA methylase, putative, group 3 [Joostella marina DSM 19592]
Length = 249
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV +SP + NV+++ + + L+++ LSD N A R+A+ GV + +
Sbjct: 75 VVANISPIEFHVIETLISNVLESEAKPLFLLLDQLSDVRNFGAIIRTAECTGVSGIIIQK 134
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
++ + S GA + I D ++ +++ G ++ + ++YD D+
Sbjct: 135 KGAAPVTADTVKTSAGAAFKVPICKVDHIKDAVFHMQASGIQVVAATEKTEN-TLYDADF 193
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ PTAI++G+E+ G+S L + D + +P+ G + S NVSVA G ++ V R
Sbjct: 194 TLPTAIIMGSEDVGISPSILKVVDQKAKLPLLGEIQSLNVSVACGAFLYEVVRQR 248
>gi|237785055|ref|YP_002905760.1| putative rRNA methylase [Corynebacterium kroppenstedtii DSM 44385]
gi|237757967|gb|ACR17217.1| putative rRNA methylase [Corynebacterium kroppenstedtii DSM 44385]
Length = 325
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPR 223
V+EG+ D N+ A FR+A LGV +V + + YR VSMG + +D R
Sbjct: 154 VLEGVGDHENIGALFRNAAGLGVDAVFFGAGCADPLYRRVVRVSMGHVLRVPFAYFDGNR 213
Query: 224 ECF----NVLRSRGYRIATTHVGMDAISVYD-MDWSCPTAIVVGNENRGVSDEALSLSDL 278
+ + L+ RGYR DA+ + + +D + A++VG E G+++ A+ SD+
Sbjct: 214 STWQRGLSELQQRGYRCVALTPSDDAVMLPEALDGAQRAALIVGAEGPGLTEHAMRASDV 273
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHAVCDRA-TRLVGCN 316
R IPM DS NV+ AA + + +RA T +VGC
Sbjct: 274 RARIPMAPGTDSLNVATAAAMGFY----ERARTSIVGCG 308
>gi|325287036|ref|YP_004262826.1| TrmH family RNA methyltransferase [Cellulophaga lytica DSM 7489]
gi|324322490|gb|ADY29955.1| RNA methyltransferase, TrmH family, group 3 [Cellulophaga lytica
DSM 7489]
Length = 245
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV +SP +E +V++ + + L+++ LSD N A R+A+ GV + +
Sbjct: 70 VVANISPITFHNFEELVESVIQKKEAPLFLLLDQLSDVRNFGAIIRTAECTGVDGIIIQK 129
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
++ + S GA + I + ++ + L++ G +I + ++YD+ +
Sbjct: 130 KGAAPVTADTIKTSAGAAFKVPIAKVNHIKDAVHYLQASGVKIIAASEKTEN-TIYDVSF 188
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+AI++G+E+ G+S L +D +P+ G ++S NVSVA G+ ++ AV R
Sbjct: 189 KEASAIIMGSEDVGISPSILKAADHTAKLPLLGEIESLNVSVACGVFLYEAVRQR 243
>gi|374619008|ref|ZP_09691542.1| 23S rRNA Gm-2251 2'-O-methyltransferase [gamma proteobacterium
HIMB55]
gi|374302235|gb|EHQ56419.1| 23S rRNA Gm-2251 2'-O-methyltransferase [gamma proteobacterium
HIMB55]
Length = 247
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 83/185 (44%), Gaps = 19/185 (10%)
Query: 142 LMEERKERFVNVVKNRSYS------------------VCLVVEGLSDFGNVSATFRSADA 183
++ ER + V V+K R + LV++G++D N+ A RSADA
Sbjct: 61 MVSERHQGVVAVIKPRQADGGVAERDLSGYLKGIDCPLVLVLDGVTDPHNLGACLRSADA 120
Query: 184 LGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGM 243
GV +V V +S++ R V+ GA + + L+ G I T
Sbjct: 121 AGVAAVIVPKDNSAELNAVARKVASGAADVIPLVRVTNLARTLRSLKELGIWIVGTTGEA 180
Query: 244 DAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
D + VYD D S PTA+V+G E G+ D +PM G V S NVSVA GI +
Sbjct: 181 DTL-VYDQDLSIPTALVMGAEGPGMRRLTTEACDFLVKLPMAGDVSSLNVSVATGICLFE 239
Query: 304 AVCDR 308
AV R
Sbjct: 240 AVRQR 244
>gi|167036782|ref|YP_001664360.1| RNA methyltransferase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115204|ref|YP_004185363.1| TrmH family RNA methyltransferase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166855616|gb|ABY94024.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928295|gb|ADV78980.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 247
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 162 CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDA 221
L+++ ++D N+ A RSA+A GV + + + S GA + + I
Sbjct: 98 LLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSN 157
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
L+ RG I T V + S ++++ P A V+GNE +GVS L D
Sbjct: 158 INNTIRDLKERGLWIVGTDVNAEK-SFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVK 216
Query: 282 IPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
IPMKG ++S N SVAA IL++ V R +
Sbjct: 217 IPMKGKINSLNASVAASILIYQVVSKRKDK 246
>gi|167039502|ref|YP_001662487.1| RNA methyltransferase [Thermoanaerobacter sp. X514]
gi|300915248|ref|ZP_07132563.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter sp.
X561]
gi|307725172|ref|YP_003904923.1| TrmH family RNA methyltransferase [Thermoanaerobacter sp. X513]
gi|166853742|gb|ABY92151.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter sp.
X514]
gi|300888972|gb|EFK84119.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter sp.
X561]
gi|307582233|gb|ADN55632.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter sp.
X513]
Length = 247
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 162 CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDA 221
L+++ ++D N+ A RSA+A GV + + + S GA + + I
Sbjct: 98 LLILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSN 157
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCS 281
L+ RG I T V + S ++++ P A V+GNE +GVS L D
Sbjct: 158 INNTIRDLKERGLWIVGTDVNAEK-SFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVK 216
Query: 282 IPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
IPMKG ++S N SVAA IL++ V R +
Sbjct: 217 IPMKGKINSLNASVAASILIYQVVSKRKDK 246
>gi|194334189|ref|YP_002016049.1| tRNA/rRNA methyltransferase SpoU [Prosthecochloris aestuarii DSM
271]
gi|194312007|gb|ACF46402.1| tRNA/rRNA methyltransferase (SpoU) [Prosthecochloris aestuarii DSM
271]
Length = 181
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 159 YSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
+ V +++ + NV + FR+ADA G++ V + ++ +E ++GA++ + E
Sbjct: 26 HPVTIILHNIRSMYNVGSIFRTADAAGIEKVIITGYTATPPRKEIDKTALGAQETMAWEY 85
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS-CPTAIVVGNENRGVSDEALSLSD 277
+ P E ++ +G I + ++ + D+D S P +++GNE +G+ D+ L D
Sbjct: 86 FAHPLEVIPAMKEKGIAICGLEITTNSRAYTDVDRSDFPLCLILGNEVQGIDDDILEQCD 145
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHHAV 305
IP G S NVSVAAG+ + V
Sbjct: 146 HILEIPQFGTKHSLNVSVAAGVALFEMV 173
>gi|294791945|ref|ZP_06757093.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp.
6_1_27]
gi|294457175|gb|EFG25537.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp.
6_1_27]
Length = 243
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 153 VVKNRSYSVCLVV--EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA 210
V++ ++ V L++ +G+ D N+ A R+A+ +G +V + ++ S GA
Sbjct: 84 VLQETTHEVPLLILTDGVEDPHNMGAIIRTAECVGATAVLIPKRHNAPINATVAKTSAGA 143
Query: 211 EKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSD 270
+ + + + L+ +G+ + H+ D ++Y+ D + PT IV+GNE +G+S
Sbjct: 144 IEQIPLVQVGNVAQTIKQLQKQGFWVMGAHMEGDR-TLYEADMTIPTVIVIGNEGKGISR 202
Query: 271 EALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D +IPM G ++S N SVAA +LM+ AV R +
Sbjct: 203 VVKEACDFLVTIPMYGNLNSLNASVAAAVLMYEAVRQRQAK 243
>gi|295135708|ref|YP_003586384.1| TrmH family tRNA/rRNA methyltransferase [Zunongwangia profunda
SM-A87]
gi|294983723|gb|ADF54188.1| TrmH family tRNA/rRNA methyltransferase [Zunongwangia profunda
SM-A87]
Length = 244
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV +SP + +E ++ + L+++ ++D N A R+A+ GV ++ +
Sbjct: 70 VVAKISPIAFKGLEETVEPILAKKEVPFFLLLDQINDVRNFGAIIRTAECCGVDAIIIPE 129
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
++ + S GA + I + ++ L+S G + D + +Y++D+
Sbjct: 130 KGAAPINADTVKTSAGAVFNIPICKVNHIKDAVFYLQSSGIQTVAATEKTDNL-IYNIDF 188
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
PTAI++GNE +G+S L D + +PM G + S NVSVA G ++ V R
Sbjct: 189 KKPTAIIMGNEAKGISPSILKTIDHKAKLPMHGEIASLNVSVACGAFLYEVVRQR 243
>gi|149371617|ref|ZP_01891033.1| tRNA/rRNA methyltransferase, TrmH family protein [unidentified
eubacterium SCB49]
gi|149355244|gb|EDM43804.1| tRNA/rRNA methyltransferase, TrmH family protein [unidentified
eubacterium SCB49]
Length = 248
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
+V SP + + ++ + + L+++ +SD N A R+A+ GV +V V
Sbjct: 71 IVALTSPIEFHDLETVVEKTLETETTPLFLILDQISDVRNFGAILRTAECTGVHAVIVQK 130
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYR-IATTHVGMDAISVYDMD 252
+ + S GA + I D ++ L+ G IA T ++YD
Sbjct: 131 KGGAPVSGDAVKTSAGAIFNIPIIKVDHIKDAIFYLQGSGVTTIAATE--KSEKTIYDQT 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+ P AIV+G+E RGVS L L D + S+P+ G ++S NVSVA G +++ V R T+
Sbjct: 189 LTTPVAIVMGSEGRGVSRSVLQLVDEKASLPVLGEINSLNVSVACGAVLYEIVRQRITK 247
>gi|319891496|ref|YP_004148371.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus
pseudintermedius HKU10-03]
gi|386320162|ref|YP_006016325.1| TrmH family RNA methyltransferase [Staphylococcus pseudintermedius
ED99]
gi|317161192|gb|ADV04735.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus
pseudintermedius HKU10-03]
gi|323465333|gb|ADX77486.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
pseudintermedius ED99]
Length = 249
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 138 LSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSS 197
++PY + + + S L+++GL D N+ + R+ADA GV + + S
Sbjct: 73 VAPYEYADLNQFLAEQAQKEGLSTVLILDGLEDPHNLGSILRTADATGVDGIIIPKRRSV 132
Query: 198 KRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT 257
+ S GA + + + + +VL+ +GY IA +A M P
Sbjct: 133 SLTQTVAKASTGAIQHVPVIRVTNLSQTMDVLKDKGYWIAGAEAS-NATDYRQMQADMPL 191
Query: 258 AIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
AIV+G+E +G+S D IPM G V+S N SVAA ++M+ R
Sbjct: 192 AIVIGSEGQGMSRRVKEKCDFYIKIPMVGHVNSLNASVAASLMMYEVFRKR 242
>gi|336172981|ref|YP_004580119.1| tRNA/rRNA methyltransferase SpoU [Lacinutrix sp. 5H-3-7-4]
gi|334727553|gb|AEH01691.1| tRNA/rRNA methyltransferase (SpoU) [Lacinutrix sp. 5H-3-7-4]
Length = 266
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 5/185 (2%)
Query: 126 DVY--LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADA 183
DVY ++ E E + + + ++ F N+ N + LV E GN+ A R+ADA
Sbjct: 82 DVYTKIAYRETTEGIIA-IAKTKENNFENLSFNTKNPLILVAEAPEKPGNIGAILRTADA 140
Query: 184 LGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGM 243
+ +V +++ + Y N S + + + N L S+G I +
Sbjct: 141 ANIDAV-IIANPKTDLYNPNIIRSSVGCLFTNQIATGSTEAIINFLNSKGINIYAA-ILQ 198
Query: 244 DAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
++ + D++ PTAIVVG E G+S+ + + IPM+G +DS NVSVAAGIL+
Sbjct: 199 ESQEYHKQDFTTPTAIVVGTEATGLSNYWRNAAKKNIKIPMQGAIDSMNVSVAAGILIFE 258
Query: 304 AVCDR 308
A R
Sbjct: 259 AKRQR 263
>gi|365961253|ref|YP_004942820.1| tRNA/rRNA methyltransferase [Flavobacterium columnare ATCC 49512]
gi|365737934|gb|AEW87027.1| tRNA/rRNA methyltransferase [Flavobacterium columnare ATCC 49512]
Length = 246
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
+++N+ + L+++ LSD N A R+A+ GV + V S+ + S GA
Sbjct: 89 IMENKKTPLFLILDQLSDARNFGAIIRTAECTGVDGIIVQKQGSAPVNGDTVKTSAGAVF 148
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
+ I D ++ L+ G + D ++YD+D P AI++G+E++GV+
Sbjct: 149 NIPICKVDHIKDAVFYLQGSGIKTVAATEKTDN-NIYDIDLKEPLAIIMGSEDKGVNPSV 207
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
L + D + +PM G + S NVSVA G ++ V R
Sbjct: 208 LKIVDEKAKLPMFGTISSLNVSVACGAFLYETVRQR 243
>gi|325954869|ref|YP_004238529.1| TrmH family RNA methyltransferase [Weeksella virosa DSM 16922]
gi|323437487|gb|ADX67951.1| RNA methyltransferase, TrmH family, group 3 [Weeksella virosa DSM
16922]
Length = 249
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E + P + E K F+ L+++ +SD N A R+A+ +G+ ++ +
Sbjct: 82 IENVLPQIYERGKTPFL-----------LILDRVSDVRNFGAIARTAECVGIDAIIIPYK 130
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWS 254
S+ + S GA + I + ++ + L+ G +A D +YD+D++
Sbjct: 131 GSASVNADAVKTSAGALYNIPICKENNLKKTVDYLQQSGIVLAAASEKSDT-YLYDVDFT 189
Query: 255 CPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
P AI++G+E GVSD L +SD +PM G S NVSVA G +++ AV R
Sbjct: 190 TPLAIIMGSEEDGVSDALLKVSDYIIKLPMAGQTASLNVSVACGAILYEAVRQR 243
>gi|302389955|ref|YP_003825776.1| TrmH family RNA methyltransferase [Thermosediminibacter oceani DSM
16646]
gi|302200583|gb|ADL08153.1| RNA methyltransferase, TrmH family, group 3 [Thermosediminibacter
oceani DSM 16646]
Length = 265
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEKWLD- 215
+ + ++G+ D GN+ R+ADA G + V + K R +MG+ L
Sbjct: 113 LIVALDGIKDPGNIGTIIRTADAAGASGILAGKGCVDIYNPKVVRS----TMGSIFHLPV 168
Query: 216 IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSL 275
IE D P + + R +I TH+G + S +D D + P +V G+E GVS E L +
Sbjct: 169 IEGVDLPVVLHELSQKRA-KIVVTHLGAEK-SYFDADLTGPVVLVFGSEAEGVSPEILKI 226
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
S IPM G +S NV+VA GI++ AV R
Sbjct: 227 STEVVKIPMPGKAESLNVAVAGGIVLFEAVRQR 259
>gi|255038542|ref|YP_003089163.1| tRNA/rRNA methyltransferase SpoU [Dyadobacter fermentans DSM 18053]
gi|254951298|gb|ACT95998.1| tRNA/rRNA methyltransferase (SpoU) [Dyadobacter fermentans DSM
18053]
Length = 178
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 155 KNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWL 214
++ + + +V++ + N+ + FR+ADA + + + +RE ++GAE +
Sbjct: 19 ESEKFPLVIVLDNIRSLNNIGSFFRTADAFRAEKIVLCGYTQQPPHREITRSALGAEMAV 78
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC--PTAIVVGNENRGVSDEA 272
E + + N L+S+GY + ++ + D + + P A V GNE GV+DE
Sbjct: 79 AWEKNPSAVDAVNALKSQGYNVWCVEQAEGSVLLQDFEPAAGDPYAFVFGNEVEGVADEV 138
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
++ SD IP G SFNVSV+AGI++ + + T
Sbjct: 139 IAASDGCLEIPQFGTKHSFNVSVSAGIVLWDYIRKKIT 176
>gi|299143999|ref|ZP_07037079.1| 23S rRNA methyltransferase [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518484|gb|EFI42223.1| 23S rRNA methyltransferase [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 260
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 151 VNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA 210
+N ++N Y+ ++ L D GNV RSADA + + ++S ++ + Y S A
Sbjct: 110 INEIENGKYAF---LDDLQDPGNVGGLIRSADAFSLDGI-ILSKNTVELYNPKLIRSTMA 165
Query: 211 EKW-LDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVS 269
+ + + + ++ E L+ +G++I +T V +A + Y+ +S + I GNE +GVS
Sbjct: 166 SVFRVKLYIVESKNEILK-LKEKGFKIISTSVE-NAKASYEYKFSENSVITFGNEAKGVS 223
Query: 270 DEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
DE S SD + IPM ++S NV+VAA IL +
Sbjct: 224 DEVFSYSDEKIYIPMSEEINSLNVNVAASILFYE 257
>gi|385809459|ref|YP_005845855.1| TrmH family rRNA methyltransferase [Ignavibacterium album JCM
16511]
gi|383801507|gb|AFH48587.1| TrmH family rRNA methyltransferase [Ignavibacterium album JCM
16511]
Length = 254
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ L+++ + D NV A R+A+ GV + + +S+ S GA + + I +
Sbjct: 106 LILILDSIMDTHNVGAILRTAECSGVDGIIITKHNSAPINETVAKTSAGASELVKICQVN 165
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+ L+ G+ I +++G ++ ++D+ P A++VGNE +G+ D
Sbjct: 166 NLANAIDELKKEGFWIVGSYLG-NSKPYTEIDYKMPVALIVGNEEKGIRKLTADKCDFLV 224
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
IPMKG + S NVSVA GIL+ + R+
Sbjct: 225 HIPMKGKIQSLNVSVATGILLFEILRQRS 253
>gi|326802929|ref|YP_004320747.1| TrmH family RNA methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650933|gb|AEA01116.1| RNA methyltransferase, TrmH family, group 3 [Aerococcus urinae
ACS-120-V-Col10a]
Length = 253
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAP 222
++++G+ D N+ + R+ADA G + + ++ +S GA ++L +
Sbjct: 106 ILLDGIMDPHNLGSILRTADACGAHGIIIPKHRAAGVTPTVAKISTGAIEYLPVARVTNM 165
Query: 223 RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSI 282
+ L+ +G + T M+ +DMD S P A+V+GNE +G+S D +I
Sbjct: 166 TQTIEALKEKGVWVFGTD--MEGQDYWDMDASLPIAVVIGNEEKGISPRVKKALDGVLTI 223
Query: 283 PMKGMVDSFNVSVAAGILMHHAVCDR 308
PM+G V S N SVAA ++M+ R
Sbjct: 224 PMRGHVQSLNASVAAALVMYEVYGKR 249
>gi|92113015|ref|YP_572943.1| RNA methyl transferase TrmH [Chromohalobacter salexigens DSM 3043]
gi|91796105|gb|ABE58244.1| 23S rRNA Gm-2251 2'-O-methyltransferase [Chromohalobacter
salexigens DSM 3043]
Length = 261
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 135 VEALSPYLMEERKERF---VNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV 191
V A +P L E +E + + S + L+++G++D N A RSADA G V V
Sbjct: 83 VIAFAPPLQAESEEALWFRLGAWQQSSPPLLLILDGVTDPHNFGACLRSADAAGAHGVIV 142
Query: 192 VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM 251
++ R V+ GA + L++ G I T G A +YD+
Sbjct: 143 PKDKAAPLNATVRKVACGAADVTPVYQVTNLARAMGRLKTHGVWIVGT-AGESAQCLYDI 201
Query: 252 DWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D + P A+V+G E +G+ DL +PM G V S NVSVA G+ + AV R
Sbjct: 202 DLAGPLAVVMGAEGKGMRRLTRDACDLLAKLPMAGSVSSLNVSVATGVCLFEAVRQR 258
>gi|329955854|ref|ZP_08296657.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides clarus YIT
12056]
gi|328525234|gb|EGF52284.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides clarus YIT
12056]
Length = 246
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K + ++++G++D N A R+ + V +V + + +
Sbjct: 84 EDLVPFLFEEGKN-----------PLFVMLDGITDVRNFGAIARTCECAAVDAVIIPAKN 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + ++ L++ G+ I D YD D
Sbjct: 133 SVTVNADAVKTSAGALHTLPVCREQNLKDTLQYLKNSGFHIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E++GVS + L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDKGVSYDNLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|352517858|ref|YP_004887175.1| putative RNA methyltransferase [Tetragenococcus halophilus NBRC
12172]
gi|348601965|dbj|BAK95011.1| putative RNA methyltransferase [Tetragenococcus halophilus NBRC
12172]
Length = 252
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 115 WFPYLDRYKCGDVYLSSSEVVEALS----PYLMEERKERFVNVVKNRSYSVCLVVEGLSD 170
W ++ +++ D YL S+E + ALS P M ++ N+ + S L+++ + D
Sbjct: 61 WQDWVKQHEL-DYYLLSNEAMNALSELPTPQGMIALVKKEENIPADFS-GKWLLLDNVQD 118
Query: 171 FGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM-GAEKWLDIELWDAPRECFNVL 229
GNV R+ADA G + + ++ RY SM G++ L I A E V
Sbjct: 119 PGNVGTIVRTADAAGFDGI-FLGKGTADRYSGKVLRSMQGSQFHLPI-FSGALEEVIPVF 176
Query: 230 RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVD 289
+ ++ T + A+S + A+++GNE +GV++E L ++D IP+ G +
Sbjct: 177 KKHTSKVYGTALDPSALSYTQVKQESSFALILGNEGQGVAEEILQMADQNLYIPIYGKAE 236
Query: 290 SFNVSVAAGILMHHAV 305
S NV VAAGILM+ V
Sbjct: 237 SLNVGVAAGILMYAFV 252
>gi|410618247|ref|ZP_11329199.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola polaris LMG
21857]
gi|410162226|dbj|GAC33337.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola polaris LMG
21857]
Length = 182
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC--DSSKRYRENRHVSMGAEKWLDIEL 218
+ +V++ +++ N+ + R ADA G++ V V S K++++ S KW+ +E
Sbjct: 30 LVVVLDNVTNSYNIGSFIRLADAFGIEKVIVCGALTISDKKFKK---ASRNEAKWVRVEY 86
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
D+ L GY I + + ++ + + P +V+GNE +GVS+ AL+LS
Sbjct: 87 SDSTTASLQTLLDAGYGIYSVELCQASVDYSQIAYPSPCVLVLGNERKGVSEAALALSHQ 146
Query: 279 RCSIPMKGMVDSFNVSVAAGILM 301
IPM GM +S NV+ A I++
Sbjct: 147 HIHIPMFGMGNSLNVATAGAIVL 169
>gi|294507468|ref|YP_003571526.1| tRNA/rRNA methyltransferase [Salinibacter ruber M8]
gi|294343796|emb|CBH24574.1| tRNA/rRNA methyltransferase [Salinibacter ruber M8]
Length = 316
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIE 217
+ + LVV+ ++D N A RSA A G V V + + + S G + I
Sbjct: 166 AQPMLLVVDRVTDPRNFGAMLRSAVAAGTDGVIVPTREMAPLNAAAIKASAGTAPRIPIA 225
Query: 218 LWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSD 277
D L+ RGY + G ++D DW P A+V+G+E +G++ E D
Sbjct: 226 RTDDLPRVLTQLKERGYFVYGAE-GTAETPLWDADWDRPVAVVLGSEGQGLAPEVAEACD 284
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
SIPM+G +S NVSVA G+L+ A R
Sbjct: 285 ELLSIPMRGPAESLNVSVATGLLVFEAARSR 315
>gi|256617041|ref|ZP_05473887.1| rRNA methylase [Enterococcus faecalis ATCC 4200]
gi|307277164|ref|ZP_07558268.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX2134]
gi|421513054|ref|ZP_15959842.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ATCC
29212]
gi|256596568|gb|EEU15744.1| rRNA methylase [Enterococcus faecalis ATCC 4200]
gi|295113457|emb|CBL32094.1| rRNA methylases [Enterococcus sp. 7L76]
gi|306506094|gb|EFM75260.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX2134]
gi|401673883|gb|EJS80253.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ATCC
29212]
Length = 258
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC-----LVV 165
+ W +L + + S EV+ +LS + V + + S+ L++
Sbjct: 57 GQQEWGTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEQSLSFKGGWLLL 116
Query: 166 EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPREC 225
+ + D GNV R+ADA G+ V ++ ++ Y SM + L E
Sbjct: 117 DNIQDPGNVGTMIRTADAAGLAGV-ILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEV 175
Query: 226 FNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK 285
+ +G + T + AI+ Y+ + A+++GNE GVS E L+ + IPMK
Sbjct: 176 VQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMK 235
Query: 286 GMVDSFNVSVAAGILMHH 303
G +S NV++AAG+LM +
Sbjct: 236 GQAESLNVAIAAGVLMFY 253
>gi|332710004|ref|ZP_08429960.1| rRNA methylase [Moorea producens 3L]
gi|332351375|gb|EGJ30959.1| rRNA methylase [Moorea producens 3L]
Length = 259
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 11/152 (7%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEKW 213
S S+ L +E + D GN+ R+A A G + + + V D+ K R S+G +W
Sbjct: 109 SLSLGLALETIQDPGNLGTIIRTAVAAGAEGLWLSSDSVELDNPKVLR----ASVG--QW 162
Query: 214 LDIELWDAPRECFNVLRSRGYRIATTHVGMDA-ISVYDMDWSCPTAIVVGNENRGVSDEA 272
+ + P V +++ I DA +S +D+DW CP+ I++GNE G+ ++
Sbjct: 163 FRLPMAVTPHLPTLVAQAQAQGIQVVATVPDAKVSYWDIDWRCPSLILLGNEAAGLREDL 222
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+ +D + +IP+ V+S NV++AA ++++ A
Sbjct: 223 VKTADQQVNIPLMPGVESLNVAIAAALMLYEA 254
>gi|261880182|ref|ZP_06006609.1| SpoU rRNA methylase [Prevotella bergensis DSM 17361]
gi|270333154|gb|EFA43940.1| SpoU rRNA methylase [Prevotella bergensis DSM 17361]
Length = 269
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 154 VKNRSYS--------VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENR- 204
VKNR+ + + +V+E + GN+ A RSADA +V +V + + N
Sbjct: 106 VKNRTLADLDLPESPLIVVLESVEKPGNLGAVLRSADASKADAV-IVCNPLTDLFNPNLI 164
Query: 205 HVSMGAEKWLDIELWDAP------RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTA 258
S+GA ++ P + C N L+ R +I T + D+ YD D TA
Sbjct: 165 RSSIGA-------IFTVPTVACSSQACMNFLKERNIKILTAQL-QDSAPYYDSDMRGGTA 216
Query: 259 IVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
IV+G E+ G++D +D IPM G +DS NVSV+A ILM AV R+
Sbjct: 217 IVMGTESTGLTDAWRKAADAHIRIPMLGQLDSLNVSVSAAILMFEAVRQRS 267
>gi|257867720|ref|ZP_05647373.1| RNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257874047|ref|ZP_05653700.1| RNA methyltransferase [Enterococcus casseliflavus EC10]
gi|257876625|ref|ZP_05656278.1| RNA methyltransferase [Enterococcus casseliflavus EC20]
gi|257801803|gb|EEV30706.1| RNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257808211|gb|EEV37033.1| RNA methyltransferase [Enterococcus casseliflavus EC10]
gi|257810791|gb|EEV39611.1| RNA methyltransferase [Enterococcus casseliflavus EC20]
Length = 259
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 119 LDRYKCGDVYLSSSEVVEALSP-------YLMEERKERFVNVVKNRSYSVCLVVEGLSDF 171
LD Y+ + YL + E+ LS + + E++E+ + + L+++ + D
Sbjct: 71 LDDYQE-ESYLITEEIAAMLSDLPTPQGIFAVVEKQEQDLQTLTGN----WLILDNVQDP 125
Query: 172 GNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRS 231
GNV R+ADA G V + ++ Y SM + + A L++
Sbjct: 126 GNVGTMIRTADAAGFSGV-FLGEGTADLYSTKVLRSMQGSNYHLPIVEGAIPPFLKQLQA 184
Query: 232 RGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSF 291
G I T + +A+ ++ A ++GNE +GV+ E L+L+D IP+ G +S
Sbjct: 185 AGVAIYGTELNKEAVPYTELPKGQAAAFILGNEGQGVNQELLALTDKNLYIPIYGQAESL 244
Query: 292 NVSVAAGILMHHAVC 306
NV++AAGILM+ AV
Sbjct: 245 NVAIAAGILMYFAVS 259
>gi|160946411|ref|ZP_02093620.1| hypothetical protein PEPMIC_00371 [Parvimonas micra ATCC 33270]
gi|158447527|gb|EDP24522.1| RNA methyltransferase, TrmH family [Parvimonas micra ATCC 33270]
Length = 261
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 129 LSSSEVVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQS 188
L++SE V + Y+ EE+K N++ CL E +SD GN R+A+A G+
Sbjct: 96 LTNSEGVITIVNYI-EEKKISSKNII-------CL--ENVSDPGNFGTIIRTANAFGIND 145
Query: 189 VHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV 248
+ ++C K + +MGA + D E L+S GYR+ +T + ++ +
Sbjct: 146 ILTINC-VDKYNSKVLRATMGA--IFRTNIIDCKIEKIKELQSGGYRLISTTLSKNSKFL 202
Query: 249 YDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
+ + +V+GNE G+S E L +S+ I M ++S NVS+AA I+M+
Sbjct: 203 EEFTFDGKNIVVMGNEANGISAEMLKISNNHLKIDMDNSMESLNVSIAAAIIMYK 257
>gi|333030107|ref|ZP_08458168.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides coprosuis
DSM 18011]
gi|332740704|gb|EGJ71186.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides coprosuis
DSM 18011]
Length = 249
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
VE L P+L E+ K F ++++G++D N A R+ + GV +V +
Sbjct: 83 VEDLVPFLYEQGKNPFF-----------VMLDGVTDVRNFGAIARTCECGGVDAVVIPMK 131
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAISVYDMDW 253
S + S GA L + + L+ G+RI A T G + D+
Sbjct: 132 GSVSVNADAVKTSAGALHTLPVCREQSLNTTIKYLKDSGFRILAATEKG--DYNYTQGDY 189
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ P +++G+E++G+S E LSL D +IP+ G + S NVSVAAG+L++ AV R
Sbjct: 190 TGPICLIMGSEDKGISAENLSLCDEWMTIPILGNIQSLNVSVAAGVLIYEAVKQR 244
>gi|218130102|ref|ZP_03458906.1| hypothetical protein BACEGG_01689 [Bacteroides eggerthii DSM 20697]
gi|317476595|ref|ZP_07935840.1| RNA methyltransferase [Bacteroides eggerthii 1_2_48FAA]
gi|217987606|gb|EEC53934.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides eggerthii
DSM 20697]
gi|316907191|gb|EFV28900.1| RNA methyltransferase [Bacteroides eggerthii 1_2_48FAA]
Length = 246
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L EE K + ++++G++D N A R+ + V +V + + +
Sbjct: 84 EDLVPFLFEEGKN-----------PLFVMLDGITDVRNFGAIARTCECAAVDAVIIPAKN 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + ++ L++ G+ I D YD D
Sbjct: 133 SVTVNADAVKTSAGALHTLPVCREQNLKDTLQYLKNSGFHIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E++GVS + L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDKGVSYDNLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|296122016|ref|YP_003629794.1| TrmH family RNA methyltransferase [Planctomyces limnophilus DSM
3776]
gi|296014356|gb|ADG67595.1| RNA methyltransferase, TrmH family, group 3 [Planctomyces
limnophilus DSM 3776]
Length = 271
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
+ L+ + E F + + + ++ ++++G+ D N+ A R A+ALG + +
Sbjct: 97 QGLAARMPEFPYADFEGLFQAQLPALLVILDGIQDSFNLGAIIRCAEALGAGGIVLPEKG 156
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC 255
S + S GA +L I A + L+SRG +I + S++++
Sbjct: 157 QSGVNSQAARSSAGAVNFLPIYRVPALDRAIDQLKSRGMKILAATEKSEQ-SLWNVVIPA 215
Query: 256 PTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
P +++GNE +GVS LS D++ IPM G S N +VAAGIL+
Sbjct: 216 PLCLIIGNEGKGVSSALLSACDIQVRIPMAGQTSSLNAAVAAGILL 261
>gi|403387039|ref|ZP_10929096.1| RNA methyltransferase [Clostridium sp. JC122]
Length = 257
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 151 VNVVKNRSYS------VCLVVEGLSDFGNVSATFRSA---DALGVQSVHVVSCDSSKRYR 201
+ VV+N++ + V ++V+ + D GN+ R+A D LG+ +++ + Y
Sbjct: 93 IAVVENKALNLSNRDGVYILVDRIQDPGNLGTIIRTAHASDCLGI----IITKGTVDIYN 148
Query: 202 ENR-HVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIV 260
E +MG+ + I + D L+ RGY++ T+ + + + YD++ + I
Sbjct: 149 EKTLRSTMGSIFNIPI-IEDKDLSFLKELQERGYKLVTSSLDTEN-NFYDINLTGKVIIA 206
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
VGNE G+SDE LS+ + IPM G +S N SVAA I+M+ AV
Sbjct: 207 VGNEGNGISDEIYELSNEKVKIPMPGGAESLNASVAASIMMYEAV 251
>gi|374317631|ref|YP_005064130.1| RNA methyl transferase TrmH [Mycoplasma haemocanis str. Illinois]
gi|363988697|gb|AEW44887.1| RNA methyltransferase TrmH group 3 [Mycoplasma haemocanis str.
Illinois]
Length = 242
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 150 FVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMG 209
+ + +R S+ L+++ L D NV A R+ A GV V ++S + S N V++
Sbjct: 84 LIKICSSRERSLILILDHLQDPFNVGAILRTCCAFGVDGV-ILSKNKSAPL--NHEVTLK 140
Query: 210 AEKWLDIELWDAPRECFN----VLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNEN 265
+ + + + N L++RGY I +T +G + S ++++S +++G+E
Sbjct: 141 SSQGYSLNINTVEVSNLNNAVTKLKNRGYWIYSTEIGHNTKSFKEVEYSNKCVLIMGSEG 200
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
+GVS SD++ IPMK V+S NVSVAAGI++
Sbjct: 201 KGVSKMLRDNSDVKVHIPMKNNVNSLNVSVAAGIII 236
>gi|29376897|ref|NP_816051.1| RNA methyltransferase [Enterococcus faecalis V583]
gi|227553934|ref|ZP_03983981.1| RNA methyltransferase [Enterococcus faecalis HH22]
gi|229545177|ref|ZP_04433902.1| RNA methyltransferase [Enterococcus faecalis TX1322]
gi|229549425|ref|ZP_04438150.1| RNA methyltransferase [Enterococcus faecalis ATCC 29200]
gi|255972129|ref|ZP_05422715.1| predicted protein [Enterococcus faecalis T1]
gi|256763096|ref|ZP_05503676.1| rRNA methylase [Enterococcus faecalis T3]
gi|256853763|ref|ZP_05559128.1| RNA methyltransferase [Enterococcus faecalis T8]
gi|256961303|ref|ZP_05565474.1| rRNA methylase [Enterococcus faecalis Merz96]
gi|256963570|ref|ZP_05567741.1| rRNA methylase [Enterococcus faecalis HIP11704]
gi|257079635|ref|ZP_05573996.1| rRNA methylase [Enterococcus faecalis JH1]
gi|257082019|ref|ZP_05576380.1| rRNA methylase [Enterococcus faecalis E1Sol]
gi|257084570|ref|ZP_05578931.1| rRNA methylase [Enterococcus faecalis Fly1]
gi|293383588|ref|ZP_06629498.1| RNA methyltransferase, TrmH family [Enterococcus faecalis R712]
gi|293387299|ref|ZP_06631856.1| RNA methyltransferase, TrmH family [Enterococcus faecalis S613]
gi|294780915|ref|ZP_06746269.1| RNA methyltransferase, TrmH family [Enterococcus faecalis PC1.1]
gi|307270842|ref|ZP_07552129.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX4248]
gi|307271508|ref|ZP_07552780.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0855]
gi|307287718|ref|ZP_07567761.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0109]
gi|312906138|ref|ZP_07765150.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis DAPTO 512]
gi|312909483|ref|ZP_07768338.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis DAPTO 516]
gi|312953482|ref|ZP_07772322.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX0102]
gi|384513799|ref|YP_005708892.1| TrmH family RNA methyltransferase [Enterococcus faecalis OG1RF]
gi|384519259|ref|YP_005706564.1| SpoU type rRNA methylase [Enterococcus faecalis 62]
gi|397700592|ref|YP_006538380.1| SpoU type rRNA methylase [Enterococcus faecalis D32]
gi|422685114|ref|ZP_16743339.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX4000]
gi|422693239|ref|ZP_16751253.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0031]
gi|422703696|ref|ZP_16761516.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX1302]
gi|422714946|ref|ZP_16771670.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0309A]
gi|422717376|ref|ZP_16774061.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0309B]
gi|422725968|ref|ZP_16782425.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0312]
gi|422732319|ref|ZP_16788659.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0645]
gi|422739378|ref|ZP_16794559.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX2141]
gi|422869073|ref|ZP_16915595.1| RNA methyltransferase, TrmH family [Enterococcus faecalis TX1467]
gi|424760593|ref|ZP_18188205.1| RNA methyltransferase, TrmH family [Enterococcus faecalis R508]
gi|428767610|ref|YP_007153721.1| RNA methyltransferase, TrmH family [Enterococcus faecalis str.
Symbioflor 1]
gi|430359658|ref|ZP_19425910.1| rRNA methylase [Enterococcus faecalis OG1X]
gi|430370079|ref|ZP_19428878.1| rRNA methylase [Enterococcus faecalis M7]
gi|29344362|gb|AAO82121.1| RNA methyltransferase, TrmH family [Enterococcus faecalis V583]
gi|227176920|gb|EEI57892.1| RNA methyltransferase [Enterococcus faecalis HH22]
gi|229305662|gb|EEN71658.1| RNA methyltransferase [Enterococcus faecalis ATCC 29200]
gi|229309722|gb|EEN75709.1| RNA methyltransferase [Enterococcus faecalis TX1322]
gi|255963147|gb|EET95623.1| predicted protein [Enterococcus faecalis T1]
gi|256684347|gb|EEU24042.1| rRNA methylase [Enterococcus faecalis T3]
gi|256710706|gb|EEU25749.1| RNA methyltransferase [Enterococcus faecalis T8]
gi|256951799|gb|EEU68431.1| rRNA methylase [Enterococcus faecalis Merz96]
gi|256954066|gb|EEU70698.1| rRNA methylase [Enterococcus faecalis HIP11704]
gi|256987665|gb|EEU74967.1| rRNA methylase [Enterococcus faecalis JH1]
gi|256990049|gb|EEU77351.1| rRNA methylase [Enterococcus faecalis E1Sol]
gi|256992600|gb|EEU79902.1| rRNA methylase [Enterococcus faecalis Fly1]
gi|291079100|gb|EFE16464.1| RNA methyltransferase, TrmH family [Enterococcus faecalis R712]
gi|291083336|gb|EFE20299.1| RNA methyltransferase, TrmH family [Enterococcus faecalis S613]
gi|294452041|gb|EFG20489.1| RNA methyltransferase, TrmH family [Enterococcus faecalis PC1.1]
gi|306501456|gb|EFM70759.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0109]
gi|306511780|gb|EFM80778.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0855]
gi|306512755|gb|EFM81400.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX4248]
gi|310627784|gb|EFQ11067.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis DAPTO 512]
gi|310628691|gb|EFQ11974.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX0102]
gi|311290156|gb|EFQ68712.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis DAPTO 516]
gi|315030220|gb|EFT42152.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX4000]
gi|315144757|gb|EFT88773.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX2141]
gi|315152149|gb|EFT96165.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0031]
gi|315159088|gb|EFU03105.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0312]
gi|315161681|gb|EFU05698.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0645]
gi|315164817|gb|EFU08834.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX1302]
gi|315574365|gb|EFU86556.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0309B]
gi|315580160|gb|EFU92351.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0309A]
gi|323481392|gb|ADX80831.1| SpoU type rRNA methylase [Enterococcus faecalis 62]
gi|327535688|gb|AEA94522.1| TrmH family RNA methyltransferase [Enterococcus faecalis OG1RF]
gi|329572242|gb|EGG53902.1| RNA methyltransferase, TrmH family [Enterococcus faecalis TX1467]
gi|397337231|gb|AFO44903.1| SpoU type rRNA methylase [Enterococcus faecalis D32]
gi|402403286|gb|EJV35965.1| RNA methyltransferase, TrmH family [Enterococcus faecalis R508]
gi|427185783|emb|CCO73007.1| RNA methyltransferase, TrmH family [Enterococcus faecalis str.
Symbioflor 1]
gi|429513282|gb|ELA02869.1| rRNA methylase [Enterococcus faecalis OG1X]
gi|429515628|gb|ELA05139.1| rRNA methylase [Enterococcus faecalis M7]
Length = 258
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC-----LVV 165
+ W +L + + S EV+ +LS + V + + S+ L++
Sbjct: 57 GQQEWGTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEQSLSFKGGWLLL 116
Query: 166 EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPREC 225
+ + D GNV R+ADA G+ V ++ ++ Y SM + L E
Sbjct: 117 DNIQDPGNVGTMIRTADAAGLAGV-ILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEV 175
Query: 226 FNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK 285
+ +G + T + AI+ Y+ + A+++GNE GVS E L+ + IPMK
Sbjct: 176 VQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMK 235
Query: 286 GMVDSFNVSVAAGILMHH 303
G +S NV++AAG+LM +
Sbjct: 236 GQAESLNVAIAAGVLMFY 253
>gi|312899832|ref|ZP_07759151.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0470]
gi|422701360|ref|ZP_16759201.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX1342]
gi|311293082|gb|EFQ71638.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0470]
gi|315170301|gb|EFU14318.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX1342]
Length = 258
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC-----LVV 165
+ W +L + + S EV+ +LS + V + + S+ L++
Sbjct: 57 GQQEWGTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEQSLSFKGGWLLL 116
Query: 166 EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPREC 225
+ + D GNV R+ADA G+ V ++ ++ Y SM + L E
Sbjct: 117 DNIQDPGNVGTMIRTADAAGLAGV-ILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEV 175
Query: 226 FNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK 285
+ +G + T + AI+ Y+ + A+++GNE GVS E L+ + IPMK
Sbjct: 176 VQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMK 235
Query: 286 GMVDSFNVSVAAGILMHH 303
G +S NV++AAG+LM +
Sbjct: 236 GQAESLNVAIAAGVLMFY 253
>gi|257090594|ref|ZP_05584955.1| predicted protein [Enterococcus faecalis CH188]
gi|312905124|ref|ZP_07764245.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX0635]
gi|422687897|ref|ZP_16746068.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0630]
gi|422736796|ref|ZP_16793058.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX1341]
gi|256999406|gb|EEU85926.1| predicted protein [Enterococcus faecalis CH188]
gi|310631514|gb|EFQ14797.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX0635]
gi|315166404|gb|EFU10421.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX1341]
gi|315579047|gb|EFU91238.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0630]
Length = 258
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC-----LVV 165
+ W +L + + S EV+ +LS + V + + S+ L++
Sbjct: 57 GQQEWGTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEQSLSFKGGWLLL 116
Query: 166 EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPREC 225
+ + D GNV R+ADA G+ V ++ ++ Y SM + L E
Sbjct: 117 DNIQDPGNVGTMIRTADAAGLAGV-ILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEV 175
Query: 226 FNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK 285
+ +G + T + AI+ Y+ + A+++GNE GVS E L+ + IPMK
Sbjct: 176 VQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMK 235
Query: 286 GMVDSFNVSVAAGILMHH 303
G +S NV++AAG+LM +
Sbjct: 236 GQAESLNVAIAAGVLMFY 253
>gi|340755897|ref|ZP_08692548.1| 23S rRNA methyltransferase [Fusobacterium sp. D12]
gi|421500596|ref|ZP_15947589.1| RNA methyltransferase, TrmH family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|340573187|gb|EFS23407.2| 23S rRNA methyltransferase [Fusobacterium sp. D12]
gi|402267762|gb|EJU17156.1| RNA methyltransferase, TrmH family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 257
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSV----HVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
+V++ + D GN+ R DA G + H V C + K R SMG+ + + +
Sbjct: 109 IVLDDIQDPGNLGTMIRLVDAAGFSDIFLTKHSVDCYNEKVVRS----SMGSIFHVRLHV 164
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
+ +E L++ Y + T + D+++ +M A V GNE GVS E L L++
Sbjct: 165 ME-KKEILEYLQTENYHVLVTTLQRDSVAYTEMQLKEKNAFVFGNEGHGVSKEFLELAEQ 223
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHA 304
+ IP+ G +S NV++AAGI++ ++
Sbjct: 224 KIIIPISGQAESLNVAMAAGIILFYS 249
>gi|227519879|ref|ZP_03949928.1| RNA methyltransferase [Enterococcus faecalis TX0104]
gi|424676236|ref|ZP_18113113.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV103]
gi|424680588|ref|ZP_18117391.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV116]
gi|424683121|ref|ZP_18119875.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV129]
gi|424686673|ref|ZP_18123339.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV25]
gi|424689562|ref|ZP_18126133.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV31]
gi|424694078|ref|ZP_18130487.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV37]
gi|424697657|ref|ZP_18133979.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV41]
gi|424700154|ref|ZP_18136352.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV62]
gi|424703004|ref|ZP_18139141.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV63]
gi|424710169|ref|ZP_18143635.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV65]
gi|424717872|ref|ZP_18147146.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV68]
gi|424721096|ref|ZP_18150194.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV72]
gi|424725047|ref|ZP_18153974.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV73]
gi|424727283|ref|ZP_18155916.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV81]
gi|424742071|ref|ZP_18170405.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV85]
gi|424751203|ref|ZP_18179235.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV93]
gi|227072673|gb|EEI10636.1| RNA methyltransferase [Enterococcus faecalis TX0104]
gi|402353886|gb|EJU88708.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV116]
gi|402357495|gb|EJU92202.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV103]
gi|402365887|gb|EJV00301.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV129]
gi|402367068|gb|EJV01419.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV25]
gi|402367647|gb|EJV01986.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV31]
gi|402371860|gb|EJV06004.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV37]
gi|402374530|gb|EJV08546.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV62]
gi|402375188|gb|EJV09180.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV41]
gi|402383612|gb|EJV17207.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV68]
gi|402383881|gb|EJV17460.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV65]
gi|402385659|gb|EJV19191.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV63]
gi|402392292|gb|EJV25556.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV72]
gi|402392440|gb|EJV25701.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV73]
gi|402397273|gb|EJV30301.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV81]
gi|402401059|gb|EJV33859.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV85]
gi|402405757|gb|EJV38341.1| RNA methyltransferase, TrmH family [Enterococcus faecalis ERV93]
Length = 258
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC-----LVV 165
+ W +L + + S EV+ +LS + V + + S+ L++
Sbjct: 57 GQQEWGTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEQSLSFKGGWLLL 116
Query: 166 EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPREC 225
+ + D GNV R+ADA G+ V ++ ++ Y SM + L E
Sbjct: 117 DNIQDPGNVGTMIRTADAAGLAGV-ILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEV 175
Query: 226 FNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK 285
+ +G + T + AI+ Y+ + A+++GNE GVS E L+ + IPMK
Sbjct: 176 VQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMK 235
Query: 286 GMVDSFNVSVAAGILMHH 303
G +S NV++AAG+LM +
Sbjct: 236 GQAESLNVAIAAGVLMFY 253
>gi|422719855|ref|ZP_16776478.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX0017]
gi|315032894|gb|EFT44826.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX0017]
Length = 258
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC-----LVV 165
+ W +L + + S EV+ +LS + V + + S+ L++
Sbjct: 57 GQQEWGTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEQSLSFKGGWLLL 116
Query: 166 EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPREC 225
+ + D GNV R+ADA G+ V ++ ++ Y SM + L E
Sbjct: 117 DNIQDPGNVGTMIRTADAAGLAGV-ILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEV 175
Query: 226 FNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK 285
+ +G + T + AI+ Y+ + A+++GNE GVS E L+ + IPMK
Sbjct: 176 VQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMK 235
Query: 286 GMVDSFNVSVAAGILMHH 303
G +S NV++AAG+LM +
Sbjct: 236 GQAESLNVAIAAGVLMFY 253
>gi|269798074|ref|YP_003311974.1| TrmH family RNA methyltransferase [Veillonella parvula DSM 2008]
gi|269094703|gb|ACZ24694.1| RNA methyltransferase, TrmH family, group 3 [Veillonella parvula
DSM 2008]
Length = 243
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 153 VVKNRSYSVCLVV--EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA 210
V++ ++ V L++ +G+ D N+ A R+A+ G +V + ++ S GA
Sbjct: 84 VLQETTHEVPLLILTDGVEDPHNMGAIIRTAECAGATAVLIPKRHNAPINATVAKTSAGA 143
Query: 211 EKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSD 270
+ + + + L+ +G+ + H+ D ++Y+ D + PT IV+GNE +G+S
Sbjct: 144 IEQIPLVQIGNVTQTIKQLQKQGFWVMGAHMEGDR-TLYEADMTIPTVIVIGNEGKGISR 202
Query: 271 EALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D +IPM G ++S N SVAA +LM+ AV R +
Sbjct: 203 VVKEACDFLVTIPMYGNLNSLNASVAAAVLMYEAVRQRQAK 243
>gi|255531956|ref|YP_003092328.1| TrmH family RNA methyltransferase [Pedobacter heparinus DSM 2366]
gi|255344940|gb|ACU04266.1| RNA methyltransferase, TrmH family, group 3 [Pedobacter heparinus
DSM 2366]
Length = 254
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ L+++G++D N+ A R+A GV ++ V S +S++ + S GA + +
Sbjct: 107 LVLILDGITDVRNMGAIARTAACAGVHAIVVPSKNSAQINADAIKTSAGALFTIPVCRHP 166
Query: 221 APRECFNVLRSRGYRI-ATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+ L+ G +I A T D I Y D++ PTAIV+G E+ G+S+E + +++
Sbjct: 167 NLHKTALFLQECGLQIVACTEKTNDLI--YVPDYTAPTAIVMGAEDEGISNELMRMANHL 224
Query: 280 CSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
IPM G + S NVSV+AGI+++ A+ R
Sbjct: 225 AKIPMIGEISSLNVSVSAGIILYEAIRQR 253
>gi|220912632|ref|YP_002487941.1| tRNA/rRNA methyltransferase SpoU [Arthrobacter chlorophenolicus A6]
gi|219859510|gb|ACL39852.1| tRNA/rRNA methyltransferase (SpoU) [Arthrobacter chlorophenolicus
A6]
Length = 269
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE---KWLDIELWD 220
V+E + D NV A FRSA AL + +V V YR + VSMG W +E W
Sbjct: 123 VLEDIVDHTNVGAIFRSAAALDIDAVLVSPRCGDPLYRRSVRVSMGTVFQVPWARLESW- 181
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVSDEALSLSDL 278
P++ VL+ G+ +A + DA V + + P A+V+G E G+S E L+ DL
Sbjct: 182 -PQD-LQVLKDHGFTVAALELTGDARDVDAVAATNPDRLALVLGTEGAGMSPETLAAVDL 239
Query: 279 RCSIPMKGMVDSFNVSVAAGI 299
IPM+ VDS NV+ A+ +
Sbjct: 240 AVKIPMRNGVDSLNVAAASAV 260
>gi|392399101|ref|YP_006435702.1| rRNA methylase [Flexibacter litoralis DSM 6794]
gi|390530179|gb|AFM05909.1| rRNA methylase [Flexibacter litoralis DSM 6794]
Length = 178
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E L+ +EE KE+ + + ++++ + NV A FR+ADA ++ + +
Sbjct: 6 LENLNRIGIEEFKEQ-------KKQPIVIILDNVRSAHNVGAAFRTADAFSIEKIALCGI 58
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDA--ISVYDMD 252
+ +RE + ++GA + ++ E +D E + LR +GY I ++ ++ +
Sbjct: 59 TAKPPHREIQKTALGATESVEWEYFDTTNEAIDTLRKQGYSIFAIEQTTESQKLNTFLPK 118
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
V GNE GV E L D IP G S NVSV+ GI++ H
Sbjct: 119 KETKYGFVFGNEAFGVDAEVLQNCDSALEIPQFGTKHSLNVSVSLGIILWH 169
>gi|419842151|ref|ZP_14365507.1| RNA methyltransferase, TrmH family [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|386902778|gb|EIJ67600.1| RNA methyltransferase, TrmH family [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 257
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSV----HVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
+V++ + D GN+ R DA G + H V C + K R SMG+ + + +
Sbjct: 109 IVLDDIQDPGNLGTMIRLVDAAGFSDIFLTKHSVDCYNEKVVRS----SMGSIFHVRLHV 164
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
+ +E L++ Y + T + D+++ +M A V GNE GVS E L L++
Sbjct: 165 ME-KKEILEYLQAENYHVLVTTLQRDSVAYTEMQLKEKNAFVFGNEGHGVSKEFLELAEQ 223
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHA 304
+ IP+ G +S NV++AAGI++ ++
Sbjct: 224 KIIIPISGQAESLNVAMAAGIILFYS 249
>gi|342215237|ref|ZP_08707891.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp. oral
taxon 780 str. F0422]
gi|341588734|gb|EGS32110.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp. oral
taxon 780 str. F0422]
Length = 239
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 159 YSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
+ + ++ +G+ D N+ A R+A+ +G +V + ++ S GA + + +
Sbjct: 92 HPLLILTDGVEDPHNMGAIIRTAECVGATAVLIPKRHNAPINATVSKTSAGAVESIPLVQ 151
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
+ L+S+G+ + H MD +YD++ + P +V+GNE +G+S L D+
Sbjct: 152 IGNVAQTIEQLKSQGFWVMGAH--MDGTVMYDVNMTGPIVLVIGNEGKGLSRLTKELCDV 209
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHA 304
+IPM G ++S N SVAA +L++ A
Sbjct: 210 LVTIPMFGTINSLNASVAAAVLLYEA 235
>gi|403743601|ref|ZP_10953153.1| RNA methyltransferase, TrmH family, group 3 [Alicyclobacillus
hesperidum URH17-3-68]
gi|403122631|gb|EJY56836.1| RNA methyltransferase, TrmH family, group 3 [Alicyclobacillus
hesperidum URH17-3-68]
Length = 228
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 153 VVKNRSYS-VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE 211
V +N ++ + +V++G++D N+ A R+A+A G Q + + +S + GA
Sbjct: 72 VARNTGHAPLVVVIDGVTDPHNLGAIARTAEAAGSQGIVISKHRASPLTETVAKAAAGAL 131
Query: 212 KWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDE 271
++L + + L+ RGY + T V S+ +D+S PT +V+G+E G+
Sbjct: 132 EYLPVARVANLVQALKELKERGYWVVGTDVEAKT-SLTSVDYSGPTVVVIGSEGEGMHRL 190
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
D SIP+ G V S N SVAAG++++ V R
Sbjct: 191 VRETCDFLVSIPILGQVQSLNASVAAGVMLYEVVRQR 227
>gi|433624907|ref|YP_007258537.1| tRNA/rRNA methylase [Mycoplasma cynos C142]
gi|429534933|emb|CCP24435.1| tRNA/rRNA methylase [Mycoplasma cynos C142]
Length = 243
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 153 VVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEK 212
++KN+ S L ++ + D N+ A R+ +A G++ + + S+ +S G
Sbjct: 84 LIKNKP-SAVLALDKIQDPHNLGAIIRTTNAAGIKDIILSKEHSADINSTVLKISSGGFV 142
Query: 213 WLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
++ ++ L+ GY + T + +A+ +++++ P+ IVVGNE GVS
Sbjct: 143 NMNFYKVNSLSASLTKLKKSGYWVYATALNENAVPHTNVNYNLPSIIVVGNEGEGVSKSV 202
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
LS+SD+ I KG V S NVSVA GI++
Sbjct: 203 LSVSDVNVYINQKGTVQSLNVSVATGIIL 231
>gi|307290546|ref|ZP_07570458.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0411]
gi|306498401|gb|EFM67906.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0411]
Length = 258
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC-----LVV 165
+ W +L + + S EV+ +LS + V + + S+ L++
Sbjct: 57 GQQEWGTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEQSLSFKGGWLLL 116
Query: 166 EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPREC 225
+ + D GNV R+ADA G+ V ++ ++ Y SM + L E
Sbjct: 117 DNIQDPGNVGTMIRTADAAGLAGV-ILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEV 175
Query: 226 FNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK 285
+ +G + T + AI+ Y+ + A+++GNE GVS E L+ + IPMK
Sbjct: 176 VQAFKKQGLPVFGTELNEAAIAYYEQEAVEIYALILGNEGSGVSPELLAETTKNLYIPMK 235
Query: 286 GMVDSFNVSVAAGILMHH 303
G +S NV++AAG+LM +
Sbjct: 236 GQAESLNVAIAAGVLMFY 253
>gi|365158091|ref|ZP_09354332.1| hypothetical protein HMPREF1015_00492 [Bacillus smithii 7_3_47FAA]
gi|363621920|gb|EHL73102.1| hypothetical protein HMPREF1015_00492 [Bacillus smithii 7_3_47FAA]
Length = 256
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE-KWLDIEL 218
+ L+++ + D GN+ R+ADA G+ +V V+ S+ Y N V A+ +++
Sbjct: 107 TTFLLIDRVQDPGNIGTMIRTADAAGIDAV-VLGKGSADPY--NPKVLRAAQGSHFHVDI 163
Query: 219 WDAP-RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSD 277
+P E ++++ +G + T + +A + D+ S A++VGNE GVS E LSL+D
Sbjct: 164 VQSPLEEAISLIQKKGVSVYGTAL-QNAENYRDIHPSKGFAVLVGNEGSGVSQELLSLTD 222
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHH 303
+P+ G +S NV+VAAGIL++H
Sbjct: 223 HNVYVPIYGKSESLNVAVAAGILLYH 248
>gi|83816243|ref|YP_445585.1| RNA methyltransferase [Salinibacter ruber DSM 13855]
gi|83757637|gb|ABC45750.1| RNA methyltransferase, TrmH family, group 3 [Salinibacter ruber DSM
13855]
Length = 253
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIE 217
+ + LVV+ ++D N A RSA A G V V + + + S G + I
Sbjct: 103 AQPMLLVVDRVTDPRNFGAMLRSAVAAGTDGVIVPTREMAPLNAAAIKASAGTAPRIPIA 162
Query: 218 LWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSD 277
D L+ RGY + G ++D DW P A+V+G+E +G++ E D
Sbjct: 163 RTDDLPRVLTQLKERGYFVYGAE-GTAETPLWDADWDRPVAVVLGSEGQGLAPEVAEACD 221
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
SIPM+G +S NVSVA G+L+ A R
Sbjct: 222 ELLSIPMRGPAESLNVSVATGLLVFEAARSR 252
>gi|443242475|ref|YP_007375700.1| RNA methyltransferase, TrmH family, group 3 [Nonlabens dokdonensis
DSW-6]
gi|442799874|gb|AGC75679.1| RNA methyltransferase, TrmH family, group 3 [Nonlabens dokdonensis
DSW-6]
Length = 243
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
E+ + + S + L+++G++D N A R+A+ GV ++ + S+ S
Sbjct: 83 EQILENIDGESKPLFLLLDGVTDVRNFGAIIRTAECTGVTAIVISEKGSAPVNAATVKTS 142
Query: 208 MGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRG 267
+GA + I + ++ ++++ G + A + D + +YD+D + P AIV+G+E +G
Sbjct: 143 VGAVFNIPICKVNHIKDAVFLMQAYGIKTAGANEKADDL-IYDIDLNQPMAIVMGSEEKG 201
Query: 268 VSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ L + D + +PM+G + S NVSVA G +++ + R
Sbjct: 202 INPSTLKILDHKVKLPMRGDIASLNVSVACGAMLYETLRQR 242
>gi|407689225|ref|YP_006804398.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Alteromonas macleodii
str. 'Balearic Sea AD45']
gi|407292605|gb|AFT96917.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Alteromonas macleodii
str. 'Balearic Sea AD45']
Length = 246
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 3/159 (1%)
Query: 152 NVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE 211
N++++ + + LV++G++D N+ A R+AD GV +V V S+ R V+ GA
Sbjct: 89 NILESEAQPLILVLDGVTDPHNLGACLRTADGAGVHAVVVPKDKSASLNGTVRKVACGAA 148
Query: 212 KWLD-IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSD 270
+ + I++ + R L+ +G I T D ++YD+D PTA+V+G E +G+
Sbjct: 149 EVVPLIQITNLAR-TLKHLQDKGLWIVGTAGETDK-TLYDVDLKGPTALVMGAEGKGMRR 206
Query: 271 EALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
D +PM G V S NVSVA G+ ++ V R
Sbjct: 207 LTKETCDELVKLPMAGSVTSLNVSVATGVCLYEIVRQRG 245
>gi|406959980|gb|EKD87190.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 182
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
+ F + KN Y ++++ + D N+ A FR ADA+ + V + + + + S
Sbjct: 17 QEFAKIKKNPIY---IILDNVLDTYNIGAIFRLADAVAAEKVILCGESETPPHTRIKKAS 73
Query: 208 MGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISV-YD-MDWSCPTAIVVGNEN 265
+ +W+ E + + + L+S+ + + SV YD ++ P A+VVG+E+
Sbjct: 74 INTTEWVSWEHFADAKTAISSLKSQIPNLKVVAIEQSPKSVSYDKFEYKFPLALVVGHES 133
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
GVS E L +SD +PM G+ S NV V+ GI+++ V + R
Sbjct: 134 NGVSKEVLEISDAIIELPMFGVNKSLNVMVSLGIVLYEVVENMPQR 179
>gi|20808679|ref|NP_623850.1| rRNA methylase [Thermoanaerobacter tengcongensis MB4]
gi|20517315|gb|AAM25454.1| rRNA methylase [Thermoanaerobacter tengcongensis MB4]
Length = 247
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
EE+KE+ L+++ ++D N+ A RSA+A GV V + S+
Sbjct: 90 EEKKEK----------PFLLILDEITDPHNMGAIIRSAEAFGVHGVIIPKRRSAGINATV 139
Query: 204 RHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGN 263
S GA +++ + L+ +G I T + S ++D+ P A+V+G+
Sbjct: 140 VKASAGAVEYIKVAKVSNINSTIRDLKEKGLWIIGTDAKAEK-SFEELDYDFPLALVIGS 198
Query: 264 ENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
E +G+S L D IPMKG ++S N SVAA ILM++ + R +
Sbjct: 199 EGKGISRLVLENCDFVIKIPMKGKINSLNASVAASILMYNILSKRQGK 246
>gi|336053775|ref|YP_004562062.1| RNA methyltransferase [Lactobacillus kefiranofaciens ZW3]
gi|333957152|gb|AEG39960.1| RNA methyltransferase [Lactobacillus kefiranofaciens ZW3]
Length = 255
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 9/150 (6%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM-GAEKWLDI 216
++ ++++ L+D GNV R+ADA G V V+S +S+ Y +M G++ +D+
Sbjct: 109 NFGKWVLLDNLADPGNVGTIIRTADAAGFDGV-VLSPESADLYNPKTQRAMQGSQFHIDL 167
Query: 217 ELWDAPRECFNVL---RSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEAL 273
R+ NV+ + G + + + A + D + A+++GNE GVS+
Sbjct: 168 ----IKRDLANVITDFQDIGIPVYASMLDRTAKQLLDFEKVPQLALIIGNEAHGVSETIA 223
Query: 274 SLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
+LSD + IP+KG +S N +VAAGI+++H
Sbjct: 224 NLSDEKLYIPIKGQAESLNAAVAAGIMIYH 253
>gi|256005539|ref|ZP_05430500.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum DSM 2360]
gi|385778389|ref|YP_005687554.1| TrmH family RNA methyltransferase [Clostridium thermocellum DSM
1313]
gi|419721303|ref|ZP_14248468.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum AD2]
gi|419724385|ref|ZP_14251451.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum YS]
gi|255990519|gb|EEU00640.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum DSM 2360]
gi|316940069|gb|ADU74103.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum DSM 1313]
gi|380772207|gb|EIC06061.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum YS]
gi|380782683|gb|EIC12316.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum AD2]
Length = 267
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEKWLDIEL 218
++++ + D GN+ R+ADA G+ V V V + K R +MG+ + I
Sbjct: 119 VILDSVQDPGNMGTIIRTADAAGMTGVIVSKGCVDVYNPKVLRS----TMGSIFHIPICQ 174
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
E + ++ RG +I H+ + +D+++ AIV+GNE G+S+E + +D+
Sbjct: 175 SQDIFETMDRMKKRGIKICAAHL-EGSCDYFDLEYKNNIAIVIGNEANGISEEVKNFADI 233
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHH 303
IPM G +S N SVAAGILM+
Sbjct: 234 LVRIPMPGRAESLNASVAAGILMYE 258
>gi|156743085|ref|YP_001433214.1| tRNA/rRNA methyltransferase SpoU [Roseiflexus castenholzii DSM
13941]
gi|156234413|gb|ABU59196.1| tRNA/rRNA methyltransferase (SpoU) [Roseiflexus castenholzii DSM
13941]
Length = 496
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWL----- 214
+V L E +++ N+ T R+ADA GV++V V + +RE + GA +
Sbjct: 334 AVILATEQINNPENLGMTLRTADAAGVEAVIVAGSGADPFHRECVRAARGAVGRIPIYTC 393
Query: 215 -DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEAL 273
D+ W R+RG + G ++YD D P I+VGNE G++D L
Sbjct: 394 ADLPTW------VGQARARGIHVVGA-TGNVERTLYDADLPLPLMIIVGNETEGLTDATL 446
Query: 274 SLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV----CDR 308
++ IPM DS NV VAAG++++ V CDR
Sbjct: 447 AVCSSLVRIPMAPGQDSLNVGVAAGVILYDIVRRRLCDR 485
>gi|336320991|ref|YP_004600959.1| tRNA/rRNA methyltransferase (SpoU) [[Cellvibrio] gilvus ATCC 13127]
gi|336104572|gb|AEI12391.1| tRNA/rRNA methyltransferase (SpoU) [[Cellvibrio] gilvus ATCC 13127]
Length = 277
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 164 VVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE---KWLDIELWD 220
V+E + D NV A FRSA ALGV +V V + YR + VSMG W I+ W
Sbjct: 132 VLEDVVDHTNVGAAFRSAAALGVDAVLVTPRCADPLYRRSVRVSMGTVFQVPWTRIDPWP 191
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNENRGVSDEALSLSDL 278
+ LR G+ A + DAI++ ++ P A+V+G E G+ D ++ DL
Sbjct: 192 G---GVDALREAGFVTAALALSDDAITLDELVADPPERLAVVLGAEGDGLKDATIAACDL 248
Query: 279 RCSIPMKGMVDSFNV 293
IPM G VDS NV
Sbjct: 249 VVRIPMAGGVDSLNV 263
>gi|326201776|ref|ZP_08191647.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
papyrosolvens DSM 2782]
gi|325988376|gb|EGD49201.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
papyrosolvens DSM 2782]
Length = 265
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 124 CGDVYLSS----SEVVEALSPY----LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVS 175
C D+ L EV + +P ++E+ + F V++ + V L + L D GN
Sbjct: 74 CSDISLVPEKLFKEVSDTQTPQGILAVLEKNQFDFQEVIEKGNSVVIL--DCLQDPGNAG 131
Query: 176 ATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRS 231
R+ADA G+ +V + V S K R +MG+ + I E +L+
Sbjct: 132 TIIRTADAAGISAVLMSKGCVDLYSPKVLRS----TMGSVFHVPIFEGLNITETIQLLKQ 187
Query: 232 RGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSF 291
+GY++ +H+ + + D + +AI+VGNE G+SDE +++D IPM G +S
Sbjct: 188 KGYKVIASHLSGKN-NYFQEDLTGRSAIIVGNEANGISDETANMADSLVKIPMPGKAESL 246
Query: 292 NVSVAAGILMHHAV 305
N SVAA I+++ V
Sbjct: 247 NASVAASIMIYEIV 260
>gi|125973737|ref|YP_001037647.1| RNA methyltransferase [Clostridium thermocellum ATCC 27405]
gi|281417893|ref|ZP_06248913.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum JW20]
gi|125713962|gb|ABN52454.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum ATCC 27405]
gi|281409295|gb|EFB39553.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum JW20]
Length = 267
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 163 LVVEGLSDFGNVSATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEKWLDIEL 218
++++ + D GN+ R+ADA G+ V V V + K R +MG+ + I
Sbjct: 119 VILDSVQDPGNMGTIIRTADAAGMTGVIVSKGCVDVYNPKVLRS----TMGSIFHIPICQ 174
Query: 219 WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDL 278
E + ++ RG +I H+ + +D+++ AIV+GNE G+S+E + +D+
Sbjct: 175 SQDIFETMDRMKKRGIKICAAHLE-GSCDYFDLEYKNNIAIVIGNEANGISEEVKNFADI 233
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHH 303
IPM G +S N SVAAGILM+
Sbjct: 234 LVRIPMPGRAESLNASVAAGILMYE 258
>gi|384567555|ref|ZP_10014659.1| rRNA methylase [Saccharomonospora glauca K62]
gi|384523409|gb|EIF00605.1| rRNA methylase [Saccharomonospora glauca K62]
Length = 267
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 150 FVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMG 209
F +VV V V+EG++D N+ + FR+A ALGV V + + + YR + VSMG
Sbjct: 111 FTDVVDG--ARVLAVLEGVNDHENLGSMFRNAAALGVDGVLLGAGCADPLYRRSVRVSMG 168
Query: 210 AEKWLDIELWDAPR--ECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP--TAIVVGNEN 265
L + P +VLR G+ +A DAI++ DM + A+++G+E
Sbjct: 169 --HVLRVPFTSVPEWPGALDVLRRHGFHVAALTPRSDAITLRDMRKAGHERVALLLGSEG 226
Query: 266 RGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGI 299
G+S AL +D IPM+ VDS NV+ AA +
Sbjct: 227 HGLSRAALDAADSAVRIPMESGVDSLNVATAAAV 260
>gi|257087434|ref|ZP_05581795.1| 23S rRNA methyltransferase [Enterococcus faecalis D6]
gi|257416641|ref|ZP_05593635.1| 23S rRNA methyltransferase [Enterococcus faecalis ARO1/DG]
gi|257419857|ref|ZP_05596851.1| rRNA methylase [Enterococcus faecalis T11]
gi|257421954|ref|ZP_05598944.1| RNA methyltransferase [Enterococcus faecalis X98]
gi|422697830|ref|ZP_16755761.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX1346]
gi|422706978|ref|ZP_16764675.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0043]
gi|422724764|ref|ZP_16781240.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX2137]
gi|256995464|gb|EEU82766.1| 23S rRNA methyltransferase [Enterococcus faecalis D6]
gi|257158469|gb|EEU88429.1| 23S rRNA methyltransferase [Enterococcus faecalis ARO1/DG]
gi|257161685|gb|EEU91645.1| rRNA methylase [Enterococcus faecalis T11]
gi|257163778|gb|EEU93738.1| RNA methyltransferase [Enterococcus faecalis X98]
gi|315025411|gb|EFT37343.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecalis TX2137]
gi|315155336|gb|EFT99352.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0043]
gi|315173665|gb|EFU17682.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX1346]
Length = 258
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC-----LVV 165
+ W +L + + S EV+ +LS + V + + S+ L++
Sbjct: 57 GQQEWRTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEQSLSFKGGWLLL 116
Query: 166 EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPREC 225
+ + D GNV R+ADA G+ V ++ ++ Y SM + L E
Sbjct: 117 DNIQDPGNVGTMIRTADAAGLAGV-ILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEV 175
Query: 226 FNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK 285
+ +G + T + AI+ Y+ + A+++GNE GVS E L+ + IPMK
Sbjct: 176 VQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMK 235
Query: 286 GMVDSFNVSVAAGILMHH 303
G +S NV++AAG+LM +
Sbjct: 236 GQAESLNVAIAAGVLMFY 253
>gi|365875733|ref|ZP_09415259.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis Ag1]
gi|442587402|ref|ZP_21006219.1| hypothetical protein D505_06218 [Elizabethkingia anophelis R26]
gi|365756578|gb|EHM98491.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis Ag1]
gi|442562843|gb|ELR80061.1| hypothetical protein D505_06218 [Elizabethkingia anophelis R26]
Length = 176
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 155 KNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWL 214
++ V ++++ + NV A FR+ADA ++ V + +RE ++GA + +
Sbjct: 20 QSEKIPVIVLLDSIRSMNNVGAVFRTADAFIIEKVVLCGITPQPPHREIHKAALGATESV 79
Query: 215 DIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPT--AIVVGNENRGVSDEA 272
D + L+S GY+I +I++ + S +++GNE GVSDEA
Sbjct: 80 DWNYEKDVTDALQKLKSEGYKILAIEQTTGSIALNEQVISKDEKYVVIMGNEVDGVSDEA 139
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
L+L D IP G S NVSV AGI+M
Sbjct: 140 LALCDGFIEIPQLGTKHSLNVSVCAGIIM 168
>gi|338706087|ref|YP_004672855.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
paraluiscuniculi Cuniculi A]
gi|335344148|gb|AEH40064.1| probable rRNA (adenosine-2'-O-)-methyltransferase [Treponema
paraluiscuniculi Cuniculi A]
Length = 292
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 140 PYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKR 199
P + ++ ++ + ++++ LV++ ++D NV A RSAD V +V + +
Sbjct: 111 PAVDSSQERTLLHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGG 170
Query: 200 YRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
VS GA W+ + +L+ G+ + V +AI + TA+
Sbjct: 171 TETIARVSAGAVAWVPLVRVRNLVRTAGILKRSGFWLYGADVAGEAIGART--FPPKTAL 228
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
V+GNE GVS + D SIP +G VDS NVSVAAGIL++
Sbjct: 229 VLGNEGHGVSPLLRTHCDALISIPTQGNVDSLNVSVAAGILLY 271
>gi|448747399|ref|ZP_21729059.1| RNA methyltransferase TrmH, group 3 [Halomonas titanicae BH1]
gi|445565091|gb|ELY21204.1| RNA methyltransferase TrmH, group 3 [Halomonas titanicae BH1]
Length = 261
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 130 SSSEVVEALSPYLMEERKERF---VNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGV 186
++ + V A P L E +E + + + + L+++G++D N A RSADA G
Sbjct: 77 AAHQGVVAFCPPLTPEGEESLWLKLRAWPSNTPPLLLILDGVTDVHNFGACLRSADAAGA 136
Query: 187 QSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAI 246
V V ++ R V+ GA + + + L+ G I T G
Sbjct: 137 HGVIVAKDKAAPLNATVRKVACGAAEVVPVYQVTNLARTLAKLKDAGVWITGT-AGEAEA 195
Query: 247 SVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVC 306
SV+D+D + PTA+V+G E +G+ D +PM G V S NVSVA GI + AV
Sbjct: 196 SVFDIDMTGPTALVMGAEGKGMRRLTREACDNLAKLPMAGEVSSLNVSVATGICLFEAVR 255
Query: 307 DR 308
R
Sbjct: 256 QR 257
>gi|440747227|ref|ZP_20926487.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB [Mariniradius
saccharolyticus AK6]
gi|436484473|gb|ELP40465.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB [Mariniradius
saccharolyticus AK6]
Length = 257
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ LV++ ++D N A R+A+ GV ++ + S++ + S GA L +
Sbjct: 110 LILVLDRITDVRNFGAIARTAECAGVHAIVIPEKGSAQINSDAVKTSAGALNHLPVARVK 169
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
L+ G + + + +YD D++ PT +++G+E G+S E + LSD
Sbjct: 170 NLYYIVKDLKKMGLNVVAVTEKTEKL-MYDTDFTSPTVLILGSEEDGISPELMGLSDESI 228
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDR 308
IPM G ++S NVSV+AG++++ A+ R
Sbjct: 229 KIPMAGNIESLNVSVSAGVVIYEAIRQR 256
>gi|422729557|ref|ZP_16785958.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0012]
gi|315150158|gb|EFT94174.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Enterococcus faecalis TX0012]
Length = 258
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 111 SNKRWFPYLDRYKCGDVYLSSSEVVEALSPYLMEERKERFVNVVKNRSYSVC-----LVV 165
+ W +L + + S EV+ +LS + V + + S+ L++
Sbjct: 57 GQQEWRTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEKSLSFKGGWLLL 116
Query: 166 EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPREC 225
+ + D GNV R+ADA G+ V ++ ++ Y SM + L E
Sbjct: 117 DNIQDPGNVGTMIRTADAAGLAGV-ILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEV 175
Query: 226 FNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMK 285
+ +G + T + AI+ Y+ + A+++GNE GVS E L+ + IPMK
Sbjct: 176 VQAFKKQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMK 235
Query: 286 GMVDSFNVSVAAGILMHH 303
G +S NV++AAG+LM +
Sbjct: 236 GQAESLNVAIAAGVLMFY 253
>gi|88803487|ref|ZP_01119012.1| RNA methyltransferase, TrmH family protein [Polaribacter irgensii
23-P]
gi|88780499|gb|EAR11679.1| RNA methyltransferase, TrmH family protein [Polaribacter irgensii
23-P]
Length = 254
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
V +SP + +E +++ + L+++ LSD N A R+A+ GV + +
Sbjct: 76 VAQISPVEFYDLEELIEKTLESNKVPLFLLLDQLSDVRNFGAIIRTAECTGVNGIIIQKD 135
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYR-IATTHVGMDAISVYDMDW 253
S+ E S GA + I D ++ +L++ + +A T D + YD++
Sbjct: 136 GSAPVNAETIKTSAGAAFKIPICKVDHIKDALYILQAAEIKTVAATEKTEDVL--YDINL 193
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+ P AIV+G+E RG++ L + D + +P+ G + S NVSVA G ++ + R
Sbjct: 194 NQPIAIVMGSEQRGINPSILKMVDYKAKLPILGDIASLNVSVACGAFLYETIRQR 248
>gi|332878889|ref|ZP_08446604.1| RNA methyltransferase, TrmH family, group 3 [Capnocytophaga sp.
oral taxon 329 str. F0087]
gi|332683240|gb|EGJ56122.1| RNA methyltransferase, TrmH family, group 3 [Capnocytophaga sp.
oral taxon 329 str. F0087]
Length = 246
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV LSP ++ ++V ++ + + L+++ LSD N A R+A+ GV + +
Sbjct: 71 VVATLSPVDYHNFEDLVISVTESGATPLFLLLDHLSDVRNFGAIIRTAECAGVSGIIIPK 130
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
S + S GA + I + + L+ G R+ + + +Y D+
Sbjct: 131 RGSVSITADTVKTSAGAVFRVPICKVENLVDAVYYLQGSGIRVVAATEKTNQL-LYAEDF 189
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
S PTAIV+G E+ G+S L + D + +PMKG + S NVSVA + ++ V R
Sbjct: 190 SVPTAIVMGAEDVGISPAVLKVVDSKAKLPMKGEIGSLNVSVACAVFLYEVVRQRG 245
>gi|15639103|ref|NP_218549.1| rRNA methylase, [Treponema pallidum subsp. pallidum str. Nichols]
gi|189025343|ref|YP_001933115.1| rRNA methylase [Treponema pallidum subsp. pallidum SS14]
gi|378972612|ref|YP_005221216.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pertenue str. SamoaD]
gi|378973678|ref|YP_005222284.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pertenue str. Gauthier]
gi|378974741|ref|YP_005223349.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pallidum DAL-1]
gi|378981587|ref|YP_005229892.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pertenue str. CDC2]
gi|384421661|ref|YP_005631020.1| TrmH family RNA methyltransferase [Treponema pallidum subsp.
pallidum str. Chicago]
gi|408502012|ref|YP_006869456.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pallidum str. Mexico A]
gi|3322373|gb|AAC65100.1| rRNA methylase, putative [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189017918|gb|ACD70536.1| possible rRNA methylase [Treponema pallidum subsp. pallidum SS14]
gi|291059527|gb|ADD72262.1| RNA methyltransferase, TrmH family, group 3 [Treponema pallidum
subsp. pallidum str. Chicago]
gi|374676935|gb|AEZ57228.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pertenue str. SamoaD]
gi|374678004|gb|AEZ58296.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pertenue str. CDC2]
gi|374679073|gb|AEZ59364.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pertenue str. Gauthier]
gi|374680139|gb|AEZ60429.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pallidum DAL-1]
gi|408475375|gb|AFU66140.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
pallidum subsp. pallidum str. Mexico A]
Length = 292
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 140 PYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKR 199
P + ++ ++ + ++++ LV++ ++D NV A RSAD V +V + +
Sbjct: 111 PAVDSSQERTLLHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGG 170
Query: 200 YRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAI 259
VS GA W+ + +L+ G+ + V +AI + TA+
Sbjct: 171 TETITRVSAGAVAWVPLVRVRNLVRTAGILKRSGFWLYGADVAGEAIGART--FPPKTAL 228
Query: 260 VVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
V+GNE GVS + D SIP +G VDS NVSVAAGIL++
Sbjct: 229 VLGNEGHGVSPLLRTHCDALISIPTQGNVDSLNVSVAAGILLY 271
>gi|260550512|ref|ZP_05824722.1| rRNA methylase [Acinetobacter sp. RUH2624]
gi|424057182|ref|ZP_17794699.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Acinetobacter
nosocomialis Ab22222]
gi|260406427|gb|EEW99909.1| rRNA methylase [Acinetobacter sp. RUH2624]
gi|407440715|gb|EKF47232.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Acinetobacter
nosocomialis Ab22222]
Length = 249
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV A+ PY K+ ++ ++ L ++ ++D N+ A R+A A+GVQ+V V
Sbjct: 72 VVAAVRPYPTLNEKD-LDQILAETPDALLLALDQVTDPHNLGACIRTAAAMGVQAVIVPR 130
Query: 194 CDSSKRYRENRHVSMG-AEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMD 252
S+ R V+ G AEK I++ + R ++ + R+ T + A+ + D
Sbjct: 131 DRSASLTPTARKVAAGGAEKVKFIQVTNLARTLAHLKETTHVRVIGTMLDESALPIQKCD 190
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
+S P IV+G E+ G+ + D + IPM G + S NVSVA G+ ++ A R+
Sbjct: 191 FSGPVVIVMGAEDTGLRPITQAQCDHKVYIPMSGNLQSLNVSVATGMALYEACRQRS 247
>gi|359395714|ref|ZP_09188766.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Halomonas
boliviensis LC1]
gi|357969979|gb|EHJ92426.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Halomonas
boliviensis LC1]
Length = 222
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 130 SSSEVVEALSPYLMEERKERF---VNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGV 186
++ + V A P L E +E + + + + L+++G++D N A RSADA G
Sbjct: 38 AAHQGVVAFCPPLTPEGEESLWLKLRAWPSNTPPLLLILDGVTDVHNFGACLRSADAAGA 97
Query: 187 QSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAI 246
V V ++ R V+ GA + + + L+ G I T G
Sbjct: 98 HGVIVAKDKAAPLNATVRKVACGAAEVVPVYQVTNLARTLAKLKDAGVWITGT-AGEAEA 156
Query: 247 SVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVC 306
SV+D+D + PTA+V+G E +G+ D +PM G V S NVSVA GI + AV
Sbjct: 157 SVFDIDMTGPTALVMGAEGKGMRRLTREACDNLAKLPMAGEVSSLNVSVATGICLFEAVR 216
Query: 307 DR 308
R
Sbjct: 217 QR 218
>gi|282850301|ref|ZP_06259680.1| RNA methyltransferase, TrmH family, group 3 [Veillonella parvula
ATCC 17745]
gi|294793809|ref|ZP_06758946.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp.
3_1_44]
gi|282579794|gb|EFB85198.1| RNA methyltransferase, TrmH family, group 3 [Veillonella parvula
ATCC 17745]
gi|294455379|gb|EFG23751.1| RNA methyltransferase, TrmH family, group 3 [Veillonella sp.
3_1_44]
Length = 243
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 153 VVKNRSYSVCLVV--EGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGA 210
V++ ++ V L++ +G+ D N+ A R+A+ G +V + ++ S GA
Sbjct: 84 VLQETTHEVPLLILTDGVEDPHNMGAIIRTAECAGATAVLIPKRHNAPINATVAKTSAGA 143
Query: 211 EKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSD 270
+ + + + L+ +G+ + H+ D ++Y+ D + PT IV+GNE +G+S
Sbjct: 144 IEQIPLVQIGNVVQTIKQLQKQGFWVMGAHMEGDR-TLYEADMTIPTVIVIGNEGKGISR 202
Query: 271 EALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
D +IPM G ++S N SVAA +LM+ AV R +
Sbjct: 203 VVKEACDFLVTIPMYGNLNSLNASVAAAVLMYEAVRQRQAK 243
>gi|418460600|ref|ZP_13031691.1| rRNA methylase [Saccharomonospora azurea SZMC 14600]
gi|359739302|gb|EHK88171.1| rRNA methylase [Saccharomonospora azurea SZMC 14600]
Length = 267
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIE 217
S +V V+EG++D N+ A FR+A A GV V V + YR + VSMG +
Sbjct: 117 SSTVLAVLEGVNDHENLGAMFRNAAAFGVDGVLVGPGCADPLYRRSVRVSMGHVLRVPFT 176
Query: 218 ---LWDAPRECFNVLRSRGYRIATTHVGMDAISVYDM--DWSCPTAIVVGNENRGVSDEA 272
+W + + LR RG+R+A DA+++ D+ + A+++G+E G+S A
Sbjct: 177 SDVVWP---DSLSELRRRGFRVAALTPRADAVALRDVCAAGTGRIALLLGSEGHGLSQSA 233
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHH 303
L +D IPM VDS NV+ AA + +
Sbjct: 234 LDAADTAVRIPMASGVDSLNVATAAAVAFYE 264
>gi|334364826|ref|ZP_08513804.1| RNA methyltransferase, TrmH family, group 3 [Alistipes sp. HGB5]
gi|390947737|ref|YP_006411497.1| rRNA methylase [Alistipes finegoldii DSM 17242]
gi|313158993|gb|EFR58370.1| RNA methyltransferase, TrmH family, group 3 [Alistipes sp. HGB5]
gi|390424306|gb|AFL78812.1| rRNA methylase, putative, group 3 [Alistipes finegoldii DSM 17242]
Length = 243
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ ++ +G++D N A RSA+ G + +S+ E S GA + +
Sbjct: 94 LVVIFDGVTDVRNFGAIARSAECAGAHGLITPLKNSAPVNAEAIRSSAGALTAIPVCRVG 153
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+ R +L++ G++I + +YD D+ PTA+V+G E+ G+S E L L D +
Sbjct: 154 SIRNTVKLLQTEGFQIVAATEKSRKL-LYDADFRKPTALVMGAEDTGISKEVLKLCDEQL 212
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAVCDR 308
+IP+ G ++S NVS AA +++ AV R
Sbjct: 213 AIPLIGHIESLNVSAAAAVMLFEAVRQR 240
>gi|268319892|ref|YP_003293548.1| rRNA methyltransferase [Lactobacillus johnsonii FI9785]
gi|262398267|emb|CAX67281.1| rRNA methyltransferase [Lactobacillus johnsonii FI9785]
Length = 253
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 159 YSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
Y +V++ L+D GNV R+ADA G V V+S +S Y SM ++ I++
Sbjct: 108 YGKWVVLDNLTDPGNVGTIIRTADAAGFDGV-VLSEESVDLYNPKVQRSMQGSQF-HIQI 165
Query: 219 WDAP-RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSD 277
P E + + G + + + A S+ + A+V+GNE G S E + +D
Sbjct: 166 IQNPILEAISSFKENGLPVYVSILDKTAKSLNNCTPVPQLALVIGNEAHGASKEVIETAD 225
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHH 303
+ IP+KG +S N +VAAGI+++H
Sbjct: 226 KKIYIPIKGKAESLNAAVAAGIMIYH 251
>gi|376260544|ref|YP_005147264.1| rRNA methylase [Clostridium sp. BNL1100]
gi|373944538|gb|AEY65459.1| rRNA methylase [Clostridium sp. BNL1100]
Length = 265
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 124 CGDVYLSS----SEVVEALSPY----LMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVS 175
C D+ L EV + +P ++E+ + F V++ + V L + L D GN
Sbjct: 74 CSDISLVPEKLFKEVSDTQTPQGILAVLEKNQFDFEQVIEEGNSVVIL--DCLQDPGNAG 131
Query: 176 ATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRS 231
R+ADA G+ +V + V S K R +MG+ + I E VL+
Sbjct: 132 TIIRTADAAGISAVLMSKGCVDLYSPKVLRS----TMGSVFHVPIFEGLNITETIQVLKQ 187
Query: 232 RGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSF 291
+GY++ +H+ + + + + +AI+VGNE G+SDE ++D IPM G +S
Sbjct: 188 KGYKVIASHLSGKN-NYFQENLTGRSAIIVGNEANGISDETAHMADSLVKIPMPGKAESL 246
Query: 292 NVSVAAGILMHHAVCDRA 309
N S+AA I+++ V +A
Sbjct: 247 NASIAASIMIYEIVRQKA 264
>gi|359689255|ref|ZP_09259256.1| rRNA methylase [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418749781|ref|ZP_13306069.1| RNA methyltransferase, TrmH family [Leptospira licerasiae str.
MMD4847]
gi|418759479|ref|ZP_13315659.1| RNA methyltransferase, TrmH family [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384113970|gb|EIE00235.1| RNA methyltransferase, TrmH family [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404274666|gb|EJZ41984.1| RNA methyltransferase, TrmH family [Leptospira licerasiae str.
MMD4847]
Length = 266
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 162 CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDA 221
LV+EG+ GN+ R+A+ G V V S G LD+ D
Sbjct: 121 VLVIEGVEKPGNLGTILRTAEGAGFHKVFVADPRLDLFNPNVIRSSTGTLFTLDVFQSDI 180
Query: 222 PRECFNVLRSRGYRIATTHVGMDAISVY-DMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+E + +L+ GY+ T V +A S+Y D A+V G+E G+S+ A S SD
Sbjct: 181 -KELYPILQKAGYK--TFAVTPEAKSLYWDAKLKGKVALVFGSEQYGLSEYARSQSDQYI 237
Query: 281 SIPMKGMVDSFNVSVAAGILMHHAV 305
S+PMKG+ DS N++++AGILM+ +
Sbjct: 238 SLPMKGVADSLNLAMSAGILMYEVL 262
>gi|310777971|ref|YP_003966304.1| TrmH family RNA methyltransferase [Ilyobacter polytropus DSM 2926]
gi|309747294|gb|ADO81956.1| RNA methyltransferase, TrmH family, group 3 [Ilyobacter polytropus
DSM 2926]
Length = 236
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 78 VEKLLTNPDDVTQFMKMER-SCMVNDGVGSMESLSNKRWFPYLDRYKCGDVYLSSSEVVE 136
V + L NP+ T K+E + +D +G ++SL++KR K + +S VV
Sbjct: 10 VTEALQNPE--TNIEKIEIFKGLKDDKIGRIKSLASKRNIKIHFTDKRAE---NSQGVVA 64
Query: 137 ALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDS 196
+S Y F+ V S+ LV++G+ D N A RSA+ GV+ + + +S
Sbjct: 65 FISQYDYYVDLGAFLEKVAKDEKSIVLVLDGVQDPRNFGAIVRSAEIFGVKGIIIPERNS 124
Query: 197 SKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCP 256
K S GA + +DI E L+ Y + G YD +
Sbjct: 125 VKINETVVKTSTGAIEHVDIIKVTNISEAIQKLKKLDYWVYGAE-GSGKKCYYDEKYPNR 183
Query: 257 TAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILM 301
TA+V+G E G+ + D+ +IPM G ++S NVSVA GIL+
Sbjct: 184 TALVMGGEGSGIRKKVKENCDILVNIPMYGKINSLNVSVAGGILL 228
>gi|224023845|ref|ZP_03642211.1| hypothetical protein BACCOPRO_00562 [Bacteroides coprophilus DSM
18228]
gi|224017067|gb|EEF75079.1| hypothetical protein BACCOPRO_00562 [Bacteroides coprophilus DSM
18228]
Length = 250
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 18/177 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E + P+L E+ K + ++++G++D N A R+ + GV ++ + S +
Sbjct: 84 EDIVPFLFEQGKNPLL-----------IMLDGVTDVRNFGAIARTCECAGVDAIIIPSKN 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + L+ G++I D YD D
Sbjct: 133 SVSVNADAIKTSAGALHTLPVCRENNLTNTIKFLKESGFKIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
+ PT I++G E+ GV E L+L D IP+ G ++S NVSVAAGIL++ AV R
Sbjct: 189 YQGPTCIIMGAEDTGVPYEHLALCDEWIKIPLFGSIESLNVSVAAGILIYEAVKQRG 245
>gi|325674569|ref|ZP_08154256.1| SpoU rRNA methylase [Rhodococcus equi ATCC 33707]
gi|325554155|gb|EGD23830.1| SpoU rRNA methylase [Rhodococcus equi ATCC 33707]
Length = 268
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE---KW 213
R V+EG++D N+ + FR+A LGV ++ + + YR VSMG +
Sbjct: 116 RDARTVAVLEGVNDHENIGSMFRNAAGLGVDAILFGAAVADPLYRRAVRVSMGHALRVPF 175
Query: 214 LDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEAL 273
I W PR N+LR RG+++ + A ++ + A+++G E G++++A+
Sbjct: 176 AQIPEW--PR-GLNILRDRGFQLISLTPNPSAPTLAEAMTGERVALLLGAEGPGLTEDAM 232
Query: 274 SLSDLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
++D+R IPM DS NV+ AA + + +
Sbjct: 233 RVTDVRARIPMSAGTDSLNVATAAAMAFYERI 264
>gi|227889545|ref|ZP_04007350.1| RNA methyltransferase [Lactobacillus johnsonii ATCC 33200]
gi|227850023|gb|EEJ60109.1| RNA methyltransferase [Lactobacillus johnsonii ATCC 33200]
Length = 253
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 159 YSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
Y +V++ L+D GNV R+ADA G V V+S +S Y SM ++ I++
Sbjct: 108 YGKWVVLDNLTDPGNVGTIIRTADAAGFDGV-VLSEESVDLYNPKVQRSMQGSQF-HIQI 165
Query: 219 WDAP-RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSD 277
P E + + G + + + A S+ + A+V+GNE G S E + +D
Sbjct: 166 IQNPILEAISSFKENGLPVYVSILDKTAKSLNNCTPVPQLALVIGNEAHGASKEVIETAD 225
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHH 303
+ IP+KG +S N +VAAGI+++H
Sbjct: 226 KKIYIPIKGKAESLNAAVAAGIMIYH 251
>gi|428184651|gb|EKX53506.1| hypothetical protein GUITHDRAFT_133205 [Guillardia theta CCMP2712]
Length = 323
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 13/213 (6%)
Query: 144 EERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN 203
+ R + + R + +V+E SD N A RS DA GV + V +
Sbjct: 98 QTRAAKIEAMAARRQSGLIVVLEDASDAHNAGAVIRSCDAFGVTEIWFV----------H 147
Query: 204 RHVSMGA--EKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW-SCPTAIV 260
+ G W+ + + +E L+ GY T + S+Y A+
Sbjct: 148 NGIKEGTSMRPWVSARTFMSTKEALEELKEMGYSNVCTCFTQSSKSLYRCSLLQDKLALW 207
Query: 261 VGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATRLVGCNGDLT 320
VGNE G+SD A+S +D+ IPM+GM+ S N+SVAA I + R+ G L+
Sbjct: 208 VGNEFAGLSDVAISAADVELYIPMRGMIQSLNLSVAAAICLSEICRQRSQENDGERWTLS 267
Query: 321 SEEKQILLAEFSLRHSKSAISIVHEYAKRKETT 353
EE+Q + A R ++ E R E T
Sbjct: 268 QEEQQKIAAAMQYRRRGFRENVSKEKRARMEKT 300
>gi|71894373|ref|YP_278481.1| tRNA/rRNA methyltransferase [Mycoplasma synoviae 53]
gi|71851161|gb|AAZ43770.1| putative tRNA/rRNA methyltransferase [Mycoplasma synoviae 53]
Length = 233
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
+ LV++ + D N+ A RSA+A G++ + + + + VS G ++
Sbjct: 84 IVLVLDHIMDTYNLGAIIRSANAAGIKDIVMPKENCADITSNVLKVSSGGFIGINFYKVS 143
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
+ N L+ Y I + + ++ S Y ++ P A ++GNE +G+S AL D +
Sbjct: 144 SLNAFLNKLKKHSYWIYGSMLDKNSTSYYSAKYNFPMAFILGNEEKGISKSALVEVDEKI 203
Query: 281 SIPMKGMVDSFNVSVAAGILM 301
IP G V+S NVSVAAGIL+
Sbjct: 204 HIPQSGSVESLNVSVAAGILL 224
>gi|284031597|ref|YP_003381528.1| tRNA/rRNA methyltransferase SpoU [Kribbella flavida DSM 17836]
gi|283810890|gb|ADB32729.1| tRNA/rRNA methyltransferase (SpoU) [Kribbella flavida DSM 17836]
Length = 268
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 21/211 (9%)
Query: 110 LSNKRWFP----YLDRYKCGDVYLSSSEVVEALSPY------LMEERKERFVNV---VKN 156
L RW L+++ VYL S+E+ E ++ + L R++ ++ +
Sbjct: 57 LLAPRWLDTLADVLEKWPEAPVYLVSAELAEQVTGFHVHRGALASYRRQAPADLDTLLAG 116
Query: 157 RSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE---KW 213
++ + + + D NV A FR+A ALGV +V V + YR + VSMG W
Sbjct: 117 VTHGRIAIFDDIVDHTNVGAGFRAAAALGVDAVLVSPTCADPLYRRSVKVSMGTVFQVPW 176
Query: 214 LDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW--SCPTAIVVGNENRGVSDE 271
+ W + LR G+ A + D+IS+ ++ A++ G E G+S
Sbjct: 177 TRVASWPG---ALDQLREHGFVTAAFALTDDSISLDELAARRDAKLALIFGTEGHGLSPH 233
Query: 272 ALSLSDLRCSIPMKGMVDSFNVSVAAGILMH 302
L +DL IPM G VDS NV+ +A + +
Sbjct: 234 VLRQTDLTVKIPMAGGVDSLNVASSAAVAFY 264
>gi|149276383|ref|ZP_01882527.1| putative tRNA:rRNA methyltransferase [Pedobacter sp. BAL39]
gi|149232903|gb|EDM38278.1| putative tRNA:rRNA methyltransferase [Pedobacter sp. BAL39]
Length = 255
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 3/176 (1%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
V+ +S ++ ++ V + + L+++G++D N+ A R+A GV ++ V +
Sbjct: 80 VIAVISSITFQKIEDIIPAVYEKGETPLILILDGITDVRNMGAIARTAACAGVHAIVVPT 139
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAISVYDMD 252
+S++ + S GA + + + L+ G +I A T D I Y D
Sbjct: 140 KNSAQINADAIKTSAGALFTIPVCRHPNLHKTALFLQECGLQIVACTEKTNDLI--YAPD 197
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ PTAIV+G E+ G+S+E + +++ IPM G + S NVSV+AG++++ A+ R
Sbjct: 198 YTTPTAIVMGAEDEGISNEIMRMANHLAKIPMIGEISSLNVSVSAGVILYEAIRQR 253
>gi|374384515|ref|ZP_09642035.1| hypothetical protein HMPREF9449_00421 [Odoribacter laneus YIT
12061]
gi|373228423|gb|EHP50732.1| hypothetical protein HMPREF9449_00421 [Odoribacter laneus YIT
12061]
Length = 186
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWD 220
V L+++ + NV + FR++DA ++ +++ ++ RE ++GAE D W+
Sbjct: 27 VILLLDNVRSLNNVGSVFRTSDAFRIEKIYLCGITATPPNREIHKTALGAE---DSVAWE 83
Query: 221 APRECF---NVLRSRGYRIATTHVGMDAISV--YDMDWSCPTAIVVGNENRGVSDEALSL 275
+E N L+++GY+I +++S+ + + A++ GNE +GV E +
Sbjct: 84 YSKETLPVVNALKAQGYKIYAVEQAENSVSLENFSLLPGEKYALIFGNEVKGVQQEVIEE 143
Query: 276 SDLRCSIPMKGMVDSFNVSVAAGILM 301
++ IP G SFN+SV+AGI++
Sbjct: 144 TEGCIEIPQYGTKHSFNISVSAGIVL 169
>gi|329961137|ref|ZP_08299392.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fluxus YIT
12057]
gi|328532075|gb|EGF58885.1| RNA methyltransferase, TrmH family, group 3 [Bacteroides fluxus YIT
12057]
Length = 249
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 136 EALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCD 195
E L P+L E+ K ++++G++D N A R+ + V +V + + +
Sbjct: 84 EDLVPFLFEQGKNPLF-----------VMLDGITDVRNFGAIARTCECAAVDAVIIPAKN 132
Query: 196 SSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYD---MD 252
S + S GA L + + + L+ G+ I D YD D
Sbjct: 133 SVSVNADAMKTSAGALHTLPVCREQSLKGTLQFLKDSGFHIVAATEKGD----YDYTKAD 188
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDR 308
++ P I++G E++GVS + L+L D IPM G ++S NVSVAAGIL++ AV R
Sbjct: 189 YTGPMCIIMGAEDKGVSYDNLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVKQR 244
>gi|51894250|ref|YP_076941.1| rRNA methyltransferase [Symbiobacterium thermophilum IAM 14863]
gi|51857939|dbj|BAD42097.1| rRNA methyltransferase [Symbiobacterium thermophilum IAM 14863]
Length = 246
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+ LV++G+ D N+ + R+ADA GV V + + VS GA +++ +
Sbjct: 95 GLLLVLDGIEDPQNLGSLLRTADAAGVHGVIIPERRAVGLTETVAKVSAGAVEYVPVARV 154
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLR 279
+L+ RGY + TH D + Y+ + P A+V+G+E RG+S D
Sbjct: 155 TNIARTLEMLKERGYWVVGTHQEADEL-YYEARLTGPLAVVIGSEGRGMSRLVAETCDFT 213
Query: 280 CSIPMKGMVDSFNVSVAAGILMH 302
+PM+G V S N +VA IL++
Sbjct: 214 VRLPMRGHVTSLNAAVAGAILLY 236
>gi|359785193|ref|ZP_09288348.1| RNA methyltransferase, TrmH family, group 3 [Halomonas sp. GFAJ-1]
gi|359297491|gb|EHK61724.1| RNA methyltransferase, TrmH family, group 3 [Halomonas sp. GFAJ-1]
Length = 265
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 130 SSSEVVEALSPYLMEERKERFVNVVKNRSYS-----VCLVVEGLSDFGNVSATFRSADAL 184
++ + V A P L+ E +E +K R++ + LV++G++D N A RSADA
Sbjct: 81 AAHQGVVAFCPPLVPEGEESLW--LKLRAWQAPTPPLLLVLDGVTDVHNFGACLRSADAA 138
Query: 185 GVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMD 244
G V V ++ R V+ GA + + + L+ G I T G
Sbjct: 139 GAHGVIVAKDKAAPLNATVRKVACGAAEVVPVYQVTNLSRTLAKLKDAGVWITGT-AGEA 197
Query: 245 AISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
SV+++D + PTA+V+G E +G+ D +PM G V S NVSVA GI + A
Sbjct: 198 EASVFEIDMTGPTALVMGAEGKGMRRLTREACDNLAKLPMAGQVSSLNVSVATGICLFEA 257
Query: 305 VCDR 308
V R
Sbjct: 258 VRQR 261
>gi|315038839|ref|YP_004032407.1| rRNA methylase [Lactobacillus amylovorus GRL 1112]
gi|325957278|ref|YP_004292690.1| rRNA methylase [Lactobacillus acidophilus 30SC]
gi|385818070|ref|YP_005854460.1| rRNA methylase [Lactobacillus amylovorus GRL1118]
gi|312276972|gb|ADQ59612.1| rRNA methylase [Lactobacillus amylovorus GRL 1112]
gi|325333843|gb|ADZ07751.1| rRNA methylase [Lactobacillus acidophilus 30SC]
gi|327184008|gb|AEA32455.1| rRNA methylase [Lactobacillus amylovorus GRL1118]
Length = 255
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM-GAEKWLDI 216
+Y ++++ L+D GNV R+ADA G V V+S +S+ Y +M G++ +D+
Sbjct: 109 NYGKWVLLDNLADPGNVGTIIRTADAAGFDGV-VLSPESADLYNPKTQRAMQGSQFHIDL 167
Query: 217 ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLS 276
D + + + + + A + D + A+++GNE GVS+ SLS
Sbjct: 168 IKRDLA-DVITDFQDSAIPVYASMLDKSAKQLQDFEKVPQLALIIGNEAHGVSETIASLS 226
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILMHHAV 305
D + IP+KG +S N +VAAGI+++H V
Sbjct: 227 DEKLYIPIKGKAESLNAAVAAGIMIYHFV 255
>gi|328955415|ref|YP_004372748.1| tRNA/rRNA methyltransferase SpoU [Coriobacterium glomerans PW2]
gi|328455739|gb|AEB06933.1| tRNA/rRNA methyltransferase (SpoU) [Coriobacterium glomerans PW2]
Length = 291
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 161 VCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAE---KW--LD 215
VC V++GL D NV A FRSA AL V +V V YR VSMG W L
Sbjct: 126 VC-VLDGLVDHTNVGAAFRSAAALNVDAVLVSPTCCDPLYRRAVRVSMGTVFQVPWTRLG 184
Query: 216 IELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC--PTAIVVGNENRGVSDEAL 273
+ P++ LR+ G+ A + ++IS+ D + A+ G E RG+SD +
Sbjct: 185 ADRASWPQDGMATLRAAGFTCAALALADESISLDDPILTAIDRLALFFGTEGRGLSDRVI 244
Query: 274 SLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
D+ IPM G VDS NV+ A+ ++ +C AT
Sbjct: 245 EACDMIVRIPMAGGVDSLNVAAASAVVFWQ-LCPHAT 280
>gi|307150993|ref|YP_003886377.1| tRNA/rRNA methyltransferase SpoU [Cyanothece sp. PCC 7822]
gi|306981221|gb|ADN13102.1| tRNA/rRNA methyltransferase (SpoU) [Cyanothece sp. PCC 7822]
Length = 264
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 15/157 (9%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHV----VSCDSSKRYRENRHVSMGAEKWLD 215
S+ LV+E L D GN+ R+A A V+ + + V D+ K R + A +W
Sbjct: 111 SLGLVLEQLQDPGNLGTIIRTAVATEVEGLWLSDDSVDVDNPKVLRAS------AGEWFR 164
Query: 216 IEL---WDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEA 272
+ + + P+ + IAT G + +++D++ PT I++GNE G+SDE
Sbjct: 165 VPMRVSQNLPQVIEDYKSQNVQVIATLPQGTK--TYWEIDFTRPTLILMGNEGAGLSDEL 222
Query: 273 LSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
+SL+D+ +IP+ G V+S NV++A +L++ A RA
Sbjct: 223 ISLADIGVNIPLGGGVESLNVAIATALLLYEAKRQRA 259
>gi|340621105|ref|YP_004739556.1| putative trmH family tRNA/rRNA methyltransferase yacO
[Capnocytophaga canimorsus Cc5]
gi|339901370|gb|AEK22449.1| Putative trmH family tRNA/rRNA methyltransferase yacO
[Capnocytophaga canimorsus Cc5]
Length = 247
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
Query: 134 VVEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVS 193
VV LSP ++ +N +++ + + LV++ LSD N A R+A GV + +
Sbjct: 71 VVANLSPIEYHHFEDLVLNTIESGNSPLFLVLDHLSDVRNFGAIIRTALCTGVSGIIIPK 130
Query: 194 CDSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDW 253
S + S GA + I + R+ L+S G ++ D + +Y++
Sbjct: 131 RGSVSVTADTVKTSAGAAFKVPICKVENLRDALFFLQSSGIKVIAATEKTDQL-IYNISM 189
Query: 254 SCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRATR 311
+ P AI++G E+ G++ L +D + +PM G + S NVSVA G+ ++ + R ++
Sbjct: 190 TEPIAIIMGAEDVGIAPALLKTADEKAKLPMVGEIGSLNVSVACGVFLYEVLRQRISK 247
>gi|42519503|ref|NP_965433.1| hypothetical protein LJ1627 [Lactobacillus johnsonii NCC 533]
gi|385826298|ref|YP_005862640.1| rRNA methylase [Lactobacillus johnsonii DPC 6026]
gi|41583791|gb|AAS09399.1| hypothetical protein LJ_1627 [Lactobacillus johnsonii NCC 533]
gi|329667742|gb|AEB93690.1| rRNA methylase [Lactobacillus johnsonii DPC 6026]
Length = 253
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 159 YSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIEL 218
Y +V++ L+D GNV R+ADA G V V+S +S Y SM ++ I++
Sbjct: 108 YGKWVVLDNLTDPGNVGTIIRTADAAGFDGV-VLSEESVDLYNPKVQRSMQGSQF-HIQI 165
Query: 219 WDAP-RECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSD 277
P E + + G + + + A S+ + A+V+GNE G S E + +D
Sbjct: 166 IQNPILEAISSFKENGLPVYVSILDKTAKSLNNCAPVPQLALVIGNEAHGASKEVIETAD 225
Query: 278 LRCSIPMKGMVDSFNVSVAAGILMHH 303
+ IP+KG +S N +VAAGI+++H
Sbjct: 226 KKIYIPIKGKAESLNAAVAAGIMIYH 251
>gi|212550964|ref|YP_002309281.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|212549202|dbj|BAG83870.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
Length = 247
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 135 VEALSPYLMEERKERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSC 194
+E++ P+L EE K + L+++G++D N A RS + GV ++ +
Sbjct: 82 LESIVPFLYEEGKVPLI-----------LLLDGITDVHNFGAIARSCECAGVNAIVIPLV 130
Query: 195 DSSKRYRENRHVSMGAEKWLDIELWDAPRECFNVLRSRGYRI-ATTHVGMDAISVY-DMD 252
+S + +S GA L + L+ GY++ A T A ++Y D
Sbjct: 131 NSVSVNADAIKISAGALMSLSVCRESNIMNAVKFLKLCGYKVYAATE---KATTLYTKTD 187
Query: 253 WSCPTAIVVGNENRGVSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHAVCDRAT 310
++ PTAIV+G+E++G+S L L D IP G + S NVS A +L++ + R T
Sbjct: 188 YTYPTAIVIGSEDKGISPAVLYLCDKLVKIPTLGNITSLNVSAATAVLLYEVLRQRTT 245
>gi|375091819|ref|ZP_09738107.1| hypothetical protein HMPREF9709_00969 [Helcococcus kunzii ATCC
51366]
gi|374562706|gb|EHR34033.1| hypothetical protein HMPREF9709_00969 [Helcococcus kunzii ATCC
51366]
Length = 241
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 162 CLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYREN-RHVSMGAEKWLDIELWD 220
L+++ + D GN+ RSA+A G ++ +S DS Y E +MG+ + L +
Sbjct: 103 ILILDKIQDPGNLGTLIRSAEAFGFNTI--MSIDSVDFYNEKVLRSTMGS--IFRLHLIE 158
Query: 221 APRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLSDLRC 280
A E + L + IA MD + +M+ AIVVGNE G+SDE + + L
Sbjct: 159 AKYEDLSKLNNHKILIAD----MDGVDFREMNNVERVAIVVGNEGNGISDEVKTYNHLTI 214
Query: 281 SIPMKGMVDSFNVSVAAGILMHH 303
IPM G ++S N V+ ILM H
Sbjct: 215 KIPMLGKIESLNAGVSGSILMSH 237
>gi|374992889|ref|YP_004968388.1| rRNA methylase [Desulfosporosinus orientis DSM 765]
gi|357211255|gb|AET65873.1| rRNA methylase [Desulfosporosinus orientis DSM 765]
Length = 264
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 160 SVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSMGAEKWLDIELW 219
+V L+++GL D GN+ R+A A GV+ V + + +MGA L +
Sbjct: 114 TVVLILDGLQDPGNLGTILRTALAAGVRQVFLTPGTVDLYNPKVLRSTMGAVFSLVVLTG 173
Query: 220 DAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSC-PTAIVVGNENRGVSDEALSLSDL 278
P+E + RG R+ V S+Y+ + P A+VVGNE +G S +
Sbjct: 174 QPPKEILTFCQERGLRVLMGDV--QGASIYETKLANEPLALVVGNEGQGPSQSFREANIQ 231
Query: 279 RCSIPMKGMVDSFNVSVAAGILMHHAVCDRA 309
R +IPM V+S N ++A GIL++ V R
Sbjct: 232 RVTIPMAHEVESLNAAMATGILLYEIVRQRG 262
>gi|330837615|ref|YP_004412256.1| TrmH family RNA methyltransferase [Sphaerochaeta coccoides DSM
17374]
gi|329749518|gb|AEC02874.1| RNA methyltransferase, TrmH family, group 3 [Sphaerochaeta
coccoides DSM 17374]
Length = 258
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 148 ERFVNVVKNRSYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVS 207
E F+ ++ S+ +V++G++D N+ A RSAD GV V V S++ VS
Sbjct: 89 EDFLGSLEEGKDSLVMVLDGITDPHNLGAILRSADQFGVDLVVVPERRSAQANETVARVS 148
Query: 208 MGAEKWLDIELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRG 267
GA +++ + +++ G+ I M+ S ++++ IV+G+E G
Sbjct: 149 SGASQYVPTAVVTNITSTLTMMKDHGFWIYGAD--MNGESSETIEFTGRCIIVMGSEGDG 206
Query: 268 VSDEALSLSDLRCSIPMKGMVDSFNVSVAAGILMHHA 304
+S D SIPM+G +DS NVSVAAGILM+ A
Sbjct: 207 MSRLVRENCDFIVSIPMQGHIDSLNVSVAAGILMYEA 243
>gi|414073838|ref|YP_006999055.1| 23S rRNA methyltransferase [Lactococcus lactis subsp. cremoris
UC509.9]
gi|413973758|gb|AFW91222.1| 23S rRNA methyltransferase [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 252
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 158 SYSVCLVVEGLSDFGNVSATFRSADALGVQSVHVVSCDSSKRYRENRHVSM-GAEKWLDI 216
S S L++E + D GNV R+ADA G +V ++ +++ Y SM G+ L I
Sbjct: 108 SASKFLLLENVQDPGNVGTMIRTADAAGFSAV-ILLGETADLYSPKVMRSMQGSNFHLAI 166
Query: 217 ELWDAPRECFNVLRSRGYRIATTHVGMDAISVYDMDWSCPTAIVVGNENRGVSDEALSLS 276
+ ECF L+ I TT + +++S Y A+V+GNE GVSD A+ +
Sbjct: 167 ARMN-EEECFAALKQAKISILTTTLSANSVS-YKTVEESSFALVMGNEGAGVSDFAVESA 224
Query: 277 DLRCSIPMKGMVDSFNVSVAAGILM 301
D I M G +S NV+VAAGILM
Sbjct: 225 DKLVHIDMPGQAESLNVAVAAGILM 249
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,278,724,534
Number of Sequences: 23463169
Number of extensions: 207773134
Number of successful extensions: 507449
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6255
Number of HSP's successfully gapped in prelim test: 2527
Number of HSP's that attempted gapping in prelim test: 495646
Number of HSP's gapped (non-prelim): 9119
length of query: 358
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 215
effective length of database: 9,003,962,200
effective search space: 1935851873000
effective search space used: 1935851873000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)