Query 018309
Match_columns 358
No_of_seqs 226 out of 3414
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 13:13:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 8.6E-41 2.9E-45 310.9 32.1 309 9-357 12-320 (323)
2 2qrd_G Protein C1556.08C; AMPK 100.0 2.9E-35 1E-39 274.8 32.4 302 14-357 9-315 (334)
3 2v8q_E 5'-AMP-activated protei 100.0 2.8E-34 9.7E-39 267.7 28.8 296 16-357 27-323 (330)
4 3kh5_A Protein MJ1225; AMPK, A 100.0 1.6E-33 5.5E-38 256.0 21.3 262 40-356 12-280 (280)
5 3ddj_A CBS domain-containing p 100.0 8.6E-33 2.9E-37 253.7 18.1 262 28-357 21-285 (296)
6 2yzq_A Putative uncharacterize 100.0 1.1E-30 3.8E-35 237.8 14.4 257 40-357 9-279 (282)
7 3kh5_A Protein MJ1225; AMPK, A 99.9 2.6E-24 8.8E-29 195.1 19.2 195 131-356 9-204 (280)
8 3ddj_A CBS domain-containing p 99.9 5.9E-24 2E-28 194.8 13.1 192 128-356 22-213 (296)
9 2v8q_E 5'-AMP-activated protei 99.9 2.1E-22 7E-27 187.4 15.3 205 131-356 40-250 (330)
10 3t4n_C Nuclear protein SNF4; C 99.9 4.8E-22 1.6E-26 184.3 16.4 199 133-356 39-247 (323)
11 2yzq_A Putative uncharacterize 99.9 4.8E-22 1.6E-26 180.5 11.5 173 131-352 6-179 (282)
12 2qrd_G Protein C1556.08C; AMPK 99.9 3.9E-21 1.3E-25 179.0 15.5 207 131-356 27-242 (334)
13 4esy_A CBS domain containing m 99.9 1.1E-21 3.7E-26 165.1 8.9 137 217-357 19-162 (170)
14 3k6e_A CBS domain protein; str 99.8 4.3E-20 1.5E-24 153.1 10.7 123 219-357 18-142 (156)
15 3lv9_A Putative transporter; C 99.8 1.7E-19 5.8E-24 148.0 13.7 119 217-357 24-145 (148)
16 3i8n_A Uncharacterized protein 99.8 1.6E-19 5.6E-24 144.8 12.6 120 217-357 7-129 (130)
17 3kpb_A Uncharacterized protein 99.8 2.3E-19 7.7E-24 142.0 11.8 119 217-357 2-120 (122)
18 3nqr_A Magnesium and cobalt ef 99.8 1.1E-19 3.9E-24 145.1 9.4 120 217-357 4-126 (127)
19 3hf7_A Uncharacterized CBS-dom 99.8 3E-19 1E-23 143.3 11.7 122 217-357 3-127 (130)
20 3lhh_A CBS domain protein; str 99.8 8.9E-19 3E-23 147.6 13.9 119 217-357 43-164 (172)
21 3jtf_A Magnesium and cobalt ef 99.8 2.5E-19 8.5E-24 143.5 10.0 118 217-357 6-126 (129)
22 1pbj_A Hypothetical protein; s 99.8 1.2E-18 4.1E-23 138.3 13.2 120 218-357 3-122 (125)
23 2uv4_A 5'-AMP-activated protei 99.8 1E-18 3.6E-23 143.9 12.7 123 224-357 29-151 (152)
24 2rih_A Conserved protein with 99.8 1.2E-18 4.1E-23 141.6 12.7 121 216-356 5-127 (141)
25 2p9m_A Hypothetical protein MJ 99.8 2.9E-18 9.8E-23 138.6 14.2 122 217-357 9-136 (138)
26 4gqw_A CBS domain-containing p 99.8 1.1E-18 3.9E-23 143.1 11.5 127 217-357 6-143 (152)
27 3oco_A Hemolysin-like protein 99.8 8.7E-19 3E-23 144.6 10.7 119 217-357 21-143 (153)
28 3gby_A Uncharacterized protein 99.8 5.9E-19 2E-23 141.0 9.3 121 217-357 6-126 (128)
29 3lfr_A Putative metal ION tran 99.8 3.3E-19 1.1E-23 144.2 7.9 121 217-357 4-127 (136)
30 2yzi_A Hypothetical protein PH 99.8 3.8E-18 1.3E-22 137.9 14.2 121 217-357 8-129 (138)
31 2o16_A Acetoin utilization pro 99.8 3.1E-18 1.1E-22 142.4 14.0 125 217-356 6-134 (160)
32 2ef7_A Hypothetical protein ST 99.8 2.6E-18 9E-23 138.0 12.9 120 217-356 5-124 (133)
33 2nyc_A Nuclear protein SNF4; b 99.8 3E-18 1E-22 139.3 13.1 126 221-357 16-141 (144)
34 3k2v_A Putative D-arabinose 5- 99.8 2.5E-18 8.7E-23 141.1 12.4 119 217-354 29-149 (149)
35 3fhm_A Uncharacterized protein 99.8 1.6E-18 5.5E-23 144.8 11.3 123 217-357 25-150 (165)
36 3fv6_A YQZB protein; CBS domai 99.8 3.1E-18 1.1E-22 142.2 12.9 122 217-357 18-144 (159)
37 1y5h_A Hypothetical protein RV 99.8 8.7E-19 3E-23 140.8 9.1 122 217-357 9-131 (133)
38 3ctu_A CBS domain protein; str 99.8 1.2E-18 4.2E-23 144.0 10.2 125 217-357 16-142 (156)
39 3lqn_A CBS domain protein; csg 99.8 2.8E-18 9.6E-23 140.8 11.0 125 217-357 16-143 (150)
40 2rc3_A CBS domain; in SITU pro 99.8 5.8E-18 2E-22 136.4 11.9 122 217-357 7-131 (135)
41 3sl7_A CBS domain-containing p 99.8 2.2E-18 7.6E-23 145.7 9.5 127 217-357 5-156 (180)
42 1pvm_A Conserved hypothetical 99.8 7.2E-18 2.5E-22 143.5 12.7 123 217-356 10-132 (184)
43 2pfi_A Chloride channel protei 99.8 9.3E-18 3.2E-22 139.6 13.1 131 217-357 14-147 (164)
44 1o50_A CBS domain-containing p 99.7 1.6E-17 5.3E-22 137.6 13.7 125 217-357 17-153 (157)
45 2emq_A Hypothetical conserved 99.7 1.1E-17 3.7E-22 138.3 12.7 125 217-357 12-139 (157)
46 1yav_A Hypothetical protein BS 99.7 9.7E-18 3.3E-22 139.1 12.1 124 217-356 15-141 (159)
47 4fry_A Putative signal-transdu 99.7 1.6E-17 5.4E-22 137.4 11.8 122 217-357 8-135 (157)
48 3kxr_A Magnesium transporter, 99.7 3E-17 1E-21 142.1 12.9 116 217-356 55-173 (205)
49 3ocm_A Putative membrane prote 99.7 2.7E-17 9.4E-22 138.6 12.0 118 217-357 37-157 (173)
50 3oi8_A Uncharacterized protein 99.7 1.1E-17 3.6E-22 138.6 8.4 114 217-352 39-155 (156)
51 3kxr_A Magnesium transporter, 99.7 4.9E-17 1.7E-21 140.8 12.8 161 79-275 12-175 (205)
52 3l2b_A Probable manganase-depe 99.7 7.6E-17 2.6E-21 143.5 14.0 199 129-355 10-242 (245)
53 1vr9_A CBS domain protein/ACT 99.7 2.6E-17 8.9E-22 143.5 10.7 120 213-356 10-129 (213)
54 4esy_A CBS domain containing m 99.7 3E-17 1E-21 137.8 9.8 136 130-272 22-160 (170)
55 2j9l_A Chloride channel protei 99.7 6.2E-17 2.1E-21 137.4 11.3 125 217-356 12-164 (185)
56 3k6e_A CBS domain protein; str 99.7 6.4E-17 2.2E-21 133.9 10.6 118 133-273 24-141 (156)
57 1vr9_A CBS domain protein/ACT 99.7 1.1E-16 3.8E-21 139.5 12.3 156 129-336 16-171 (213)
58 3lv9_A Putative transporter; C 99.7 2.1E-16 7.1E-21 129.4 13.2 117 129-273 26-144 (148)
59 3lhh_A CBS domain protein; str 99.7 2.8E-16 9.5E-21 132.2 14.2 120 127-274 43-164 (172)
60 2d4z_A Chloride channel protei 99.7 3.8E-16 1.3E-20 138.9 15.6 138 217-357 14-246 (250)
61 3i8n_A Uncharacterized protein 99.7 2.2E-16 7.6E-21 126.3 12.2 118 128-272 8-127 (130)
62 3kpb_A Uncharacterized protein 99.7 1.6E-16 5.4E-21 125.5 11.0 114 131-273 6-119 (122)
63 2oux_A Magnesium transporter; 99.7 2.9E-16 9.8E-21 143.0 11.3 117 216-356 137-258 (286)
64 2ef7_A Hypothetical protein ST 99.7 1E-15 3.6E-20 122.7 12.5 119 129-274 7-125 (133)
65 1pbj_A Hypothetical protein; s 99.7 6.5E-16 2.2E-20 122.3 10.9 117 131-274 6-122 (125)
66 2yvy_A MGTE, Mg2+ transporter 99.6 6.3E-16 2.1E-20 140.2 11.6 117 216-356 135-256 (278)
67 3gby_A Uncharacterized protein 99.6 3.3E-16 1.1E-20 124.9 8.7 117 130-273 9-125 (128)
68 3nqr_A Magnesium and cobalt ef 99.6 2E-16 7E-21 126.0 6.9 115 131-272 8-124 (127)
69 3hf7_A Uncharacterized CBS-dom 99.6 1.3E-15 4.4E-20 122.0 11.4 115 134-273 12-126 (130)
70 3fv6_A YQZB protein; CBS domai 99.6 1.1E-15 3.7E-20 126.7 11.1 118 130-273 21-143 (159)
71 2p9m_A Hypothetical protein MJ 99.6 1.1E-15 3.8E-20 123.3 10.6 118 130-273 12-135 (138)
72 2yzi_A Hypothetical protein PH 99.6 2.3E-15 7.8E-20 121.5 12.4 120 129-274 10-129 (138)
73 2o16_A Acetoin utilization pro 99.6 1.6E-15 5.6E-20 125.8 11.8 127 129-273 8-134 (160)
74 2rih_A Conserved protein with 99.6 2.4E-15 8E-20 122.0 12.5 118 130-272 9-126 (141)
75 4gqw_A CBS domain-containing p 99.6 3.8E-16 1.3E-20 127.9 7.8 133 130-274 9-143 (152)
76 3lfr_A Putative metal ION tran 99.6 3.2E-16 1.1E-20 126.5 6.9 117 131-273 8-126 (136)
77 3oco_A Hemolysin-like protein 99.6 1.5E-15 5.2E-20 125.0 11.0 116 131-274 25-143 (153)
78 1o50_A CBS domain-containing p 99.6 4.9E-15 1.7E-19 122.4 14.1 133 129-274 19-153 (157)
79 3jtf_A Magnesium and cobalt ef 99.6 9.6E-16 3.3E-20 122.5 9.5 114 131-273 10-125 (129)
80 3lqn_A CBS domain protein; csg 99.6 4.1E-15 1.4E-19 121.8 13.1 119 134-274 25-143 (150)
81 3fhm_A Uncharacterized protein 99.6 5.9E-15 2E-19 123.0 13.9 116 134-274 35-150 (165)
82 3k2v_A Putative D-arabinose 5- 99.6 1.6E-15 5.6E-20 124.2 10.2 116 129-270 31-148 (149)
83 3ocm_A Putative membrane prote 99.6 5.7E-15 1.9E-19 124.3 12.9 119 127-274 37-157 (173)
84 2rc3_A CBS domain; in SITU pro 99.6 3.3E-15 1.1E-19 120.1 11.0 115 134-274 17-131 (135)
85 2nyc_A Nuclear protein SNF4; b 99.6 4.1E-15 1.4E-19 120.6 11.5 119 131-273 16-140 (144)
86 2uv4_A 5'-AMP-activated protei 99.6 6.8E-15 2.3E-19 120.9 12.8 115 134-272 29-149 (152)
87 1pvm_A Conserved hypothetical 99.6 4.3E-15 1.5E-19 126.2 12.0 121 129-273 12-132 (184)
88 2emq_A Hypothetical conserved 99.6 6.6E-15 2.3E-19 121.4 12.4 124 129-274 14-139 (157)
89 3oi8_A Uncharacterized protein 99.6 4.1E-15 1.4E-19 122.9 10.9 114 128-269 40-155 (156)
90 3l2b_A Probable manganase-depe 99.6 1.7E-14 5.9E-19 128.1 15.4 209 27-272 7-242 (245)
91 3ctu_A CBS domain protein; str 99.6 2.1E-15 7.3E-20 124.4 8.8 121 131-274 20-142 (156)
92 3pc3_A CG1753, isoform A; CBS, 99.6 4.1E-15 1.4E-19 146.7 12.1 123 216-357 384-511 (527)
93 2yvy_A MGTE, Mg2+ transporter 99.6 9.3E-15 3.2E-19 132.5 13.6 121 123-274 132-257 (278)
94 1y5h_A Hypothetical protein RV 99.6 1.5E-15 5.2E-20 121.7 7.2 116 131-272 13-129 (133)
95 2oux_A Magnesium transporter; 99.6 6.7E-15 2.3E-19 134.0 11.4 121 123-274 134-259 (286)
96 4fry_A Putative signal-transdu 99.6 1.7E-14 5.9E-19 119.0 11.9 116 134-275 21-136 (157)
97 3sl7_A CBS domain-containing p 99.6 7.7E-15 2.6E-19 123.7 9.0 137 131-273 9-155 (180)
98 2zy9_A Mg2+ transporter MGTE; 99.6 3.3E-14 1.1E-18 138.0 14.5 121 123-274 152-277 (473)
99 1yav_A Hypothetical protein BS 99.6 1E-14 3.5E-19 120.7 9.1 122 131-274 19-142 (159)
100 2d4z_A Chloride channel protei 99.6 5.9E-14 2E-18 124.7 14.4 141 128-273 15-245 (250)
101 2zy9_A Mg2+ transporter MGTE; 99.5 1.5E-14 5.1E-19 140.5 11.3 117 216-356 155-276 (473)
102 2pfi_A Chloride channel protei 99.5 3.4E-14 1.2E-18 117.9 11.6 124 131-274 18-147 (164)
103 3org_A CMCLC; transporter, tra 99.5 2.6E-15 8.8E-20 150.9 4.7 139 216-356 453-624 (632)
104 2j9l_A Chloride channel protei 99.5 7.2E-14 2.4E-18 118.3 12.7 134 136-274 25-165 (185)
105 3usb_A Inosine-5'-monophosphat 99.5 1.3E-13 4.3E-18 134.8 13.3 114 220-356 117-233 (511)
106 1zfj_A Inosine monophosphate d 99.4 6.1E-13 2.1E-17 130.1 13.4 115 219-356 93-210 (491)
107 4fxs_A Inosine-5'-monophosphat 99.4 6.2E-14 2.1E-18 136.5 4.8 114 219-355 92-207 (496)
108 3usb_A Inosine-5'-monophosphat 99.4 3.3E-12 1.1E-16 124.8 16.6 156 131-336 118-276 (511)
109 3pc3_A CG1753, isoform A; CBS, 99.4 4.4E-13 1.5E-17 132.1 10.0 122 128-275 386-512 (527)
110 1me8_A Inosine-5'-monophosphat 99.4 3.6E-14 1.2E-18 138.8 0.2 113 222-356 103-220 (503)
111 1vrd_A Inosine-5'-monophosphat 99.4 5E-14 1.7E-18 137.8 0.2 115 219-356 98-214 (494)
112 4avf_A Inosine-5'-monophosphat 99.4 6.8E-14 2.3E-18 136.1 0.1 113 219-355 91-205 (490)
113 1zfj_A Inosine monophosphate d 99.3 3E-11 1E-15 118.1 15.1 116 131-274 95-211 (491)
114 1me8_A Inosine-5'-monophosphat 99.3 2.2E-13 7.6E-18 133.1 -0.2 165 132-344 103-269 (503)
115 4af0_A Inosine-5'-monophosphat 99.3 2.4E-13 8.4E-18 129.7 0.0 109 222-354 144-255 (556)
116 3org_A CMCLC; transporter, tra 99.3 1.4E-12 4.9E-17 131.0 5.1 136 129-271 456-622 (632)
117 4fxs_A Inosine-5'-monophosphat 99.2 3E-12 1E-16 124.6 5.0 112 131-272 94-207 (496)
118 4af0_A Inosine-5'-monophosphat 99.2 1.4E-12 4.9E-17 124.5 1.2 113 132-272 144-256 (556)
119 4avf_A Inosine-5'-monophosphat 99.2 7E-12 2.4E-16 121.9 4.6 112 131-273 93-206 (490)
120 1vrd_A Inosine-5'-monophosphat 99.2 4.8E-12 1.6E-16 123.8 3.4 113 131-273 100-214 (494)
121 2cu0_A Inosine-5'-monophosphat 99.2 1.8E-12 6.3E-17 126.3 0.2 109 221-355 98-206 (486)
122 1jcn_A Inosine monophosphate d 99.2 1.8E-13 6E-18 134.5 -7.3 117 218-355 110-231 (514)
123 3ghd_A A cystathionine beta-sy 99.1 2.3E-10 7.8E-15 80.7 6.6 69 226-311 2-70 (70)
124 2cu0_A Inosine-5'-monophosphat 99.0 6.3E-11 2.1E-15 115.5 1.1 161 131-347 98-258 (486)
125 1jcn_A Inosine monophosphate d 99.0 1.6E-11 5.4E-16 120.6 -4.2 118 130-272 112-231 (514)
126 3fio_A A cystathionine beta-sy 98.8 6.5E-09 2.2E-13 72.9 6.6 48 226-274 2-49 (70)
127 3ghd_A A cystathionine beta-sy 98.8 2.3E-08 7.9E-13 70.3 7.4 47 308-356 2-48 (70)
128 3fio_A A cystathionine beta-sy 98.6 1.1E-07 3.7E-12 66.5 7.4 48 307-356 1-48 (70)
129 1tif_A IF3-N, translation init 57.9 19 0.00066 24.9 4.9 30 246-275 12-41 (78)
130 1tif_A IF3-N, translation init 39.2 46 0.0016 23.0 4.4 25 329-354 13-37 (78)
131 1p0z_A Sensor kinase CITA; tra 27.3 44 0.0015 25.1 3.1 17 249-265 105-121 (131)
132 1svj_A Potassium-transporting 27.3 27 0.00092 27.6 1.9 35 317-353 121-155 (156)
133 3by8_A Sensor protein DCUS; hi 26.2 45 0.0016 25.4 3.0 18 249-266 110-127 (142)
134 3fan_A Non-structural protein; 20.7 43 0.0015 27.9 1.8 26 245-270 124-149 (213)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=8.6e-41 Score=310.92 Aligned_cols=309 Identities=22% Similarity=0.382 Sum_probs=243.3
Q ss_pred hhchhhHHHHHHHHHhhhCcccccccCCCCcceEEEEcCCCCHHHHHHHHHHCCCCeeeceeCCCCeEEEeeehHHHHHH
Q 018309 9 VLHNTQRLIYSFLVIVYLHSCPHIQYTSSFLTQVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILI 88 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~sl~~a~~~m~~~~i~~~pV~d~~~~~~vGilt~~Di~~~ 88 (358)
+-+..+..+...++||+.++|||+|| .+.++++++.++|+.+|++.|.++++.++||||++.++++|++|..|++.+
T Consensus 12 ~~~~~~~~~~~i~~~l~~~~~~d~m~---~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~ 88 (323)
T 3t4n_C 12 VSIEQQLAVESIRKFLNSKTSYDVLP---VSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINV 88 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHSBHHHHSC---SEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCchHhhCC---CCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHH
Confidence 33444558888899999999999997 558999999999999999999999999999999887899999999999997
Q ss_pred HHHhccCCCCCCHHHHhhcchHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCC
Q 018309 89 LRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGP 168 (358)
Q Consensus 89 l~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~ 168 (358)
+.+++..+... +.++......+.+...... .|.++++++++++++.+|++.|.+++++++||+|++..
T Consensus 89 l~~~~~~~~~~--~~l~~~~~~~v~~i~~~~~----------~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~ 156 (323)
T 3t4n_C 89 IQYYFSNPDKF--ELVDKLQLDGLKDIERALG----------VDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEE 156 (323)
T ss_dssp HHHHHHCGGGG--GGGGGCBHHHHHHHHHHTT----------C----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTT
T ss_pred HHHHHcCcchh--HHHHHHHHHHHHHHHHHhC----------CCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCC
Confidence 76665433221 3444554555555544433 57889999999999999999999999999999986332
Q ss_pred CCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCC
Q 018309 169 AGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVS 248 (358)
Q Consensus 169 ~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~ 248 (358)
.+ ..+++|++|.+|+++++..+... ......+++++.++ |.++++++.+++++.+|++.|.+++++
T Consensus 157 ~~-~~~l~Givt~~di~~~l~~~~~~----~~~~~~~v~~~~~~---------m~~~~~~v~~~~~~~~~~~~m~~~~~~ 222 (323)
T 3t4n_C 157 TH-REIVVSVLTQYRILKFVALNCRE----THFLKIPIGDLNII---------TQDNMKSCQMTTPVIDVIQMLTQGRVS 222 (323)
T ss_dssp TC-CEEEEEEEEHHHHHHHHHHHCGG----GGGCCSBGGGTTCS---------BCTTCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred CC-ccceEEEecHHHHHHHHHhcCCc----hhhhhCcHHHcCCC---------CCCCcEEECCCCcHHHHHHHHHHcCCC
Confidence 22 11399999999999998766533 11223343333211 677899999999999999999999999
Q ss_pred EEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCC
Q 018309 249 SIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPG 328 (358)
Q Consensus 249 ~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~ 328 (358)
++||+|++|+++|++|.+|+++.+..+.+..+ +.++.+++.... -..+++++|++++++.+|++.|.+++
T Consensus 223 ~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~~~-------~~~~~~~~v~~~~~l~~~~~~m~~~~ 292 (323)
T 3t4n_C 223 SVPIIDENGYLINVYEAYDVLGLIKGGIYNDL---SLSVGEALMRRS-------DDFEGVYTCTKNDKLSTIMDNIRKAR 292 (323)
T ss_dssp EEEEECTTCBEEEEEETTHHHHHHHTTHHHHT---TSBHHHHGGGSC-------TTCCCCEEECTTCBHHHHHHHHHHSC
T ss_pred EEEEECCCCeEEEEEeHHHHHHHHhhchhhhc---cCCHHHHHhhcc-------ccCCCCEEECCCCCHHHHHHHHHHhC
Confidence 99999999999999999999998765543333 467888553211 00126899999999999999999999
Q ss_pred CCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 329 VRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 329 ~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
++++||+| ++|+++|+||.+||++++++
T Consensus 293 ~~~l~Vvd-~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 293 VHRFFVVD-DVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp CCEEEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred CCEEEEEC-CCCcEEEEEEHHHHHHHHHh
Confidence 99999999 47999999999999999975
No 2
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=100.00 E-value=2.9e-35 Score=274.82 Aligned_cols=302 Identities=21% Similarity=0.402 Sum_probs=231.0
Q ss_pred hHHHHHHHHHhhhCcccccccCCCCcceEEEEcCCCCHHHHHHHHHHCCCCeeeceeCCCCeEEEeeehHHHHHHHHHhc
Q 018309 14 QRLIYSFLVIVYLHSCPHIQYTSSFLTQVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELG 93 (358)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~sl~~a~~~m~~~~i~~~pV~d~~~~~~vGilt~~Di~~~l~~~~ 93 (358)
+..+..+++|+...+|+|+|+ .+.++++++.++|+.+|++.|.++++.++||+|++.++++|+++..|++.++...+
T Consensus 9 ~~~~~~~~~~l~~~~v~dim~---~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~ 85 (334)
T 2qrd_G 9 KGALKEIQAFIRSRTSYDVLP---TSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYY 85 (334)
T ss_dssp HHHHHHHHHHHHHSBGGGGSC---SEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCchhhhCC---CCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHh
Confidence 346777778888999999996 34689999999999999999999999999999987789999999999998665432
Q ss_pred c---CCCCCCHHHHhhcchHHHHHHHHhhccccccCCCCCCCCCCc--eEeCCCCCHHHHHHHHhhCCcceEEEEecCCC
Q 018309 94 T---NGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPL--VQAGPYDSLKEVALKILQNKVATVPIIHSTGP 168 (358)
Q Consensus 94 ~---~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~--v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~ 168 (358)
. .+.. .+.+....+..+.+.... +|..++ +++.+++++.+|++.|.+++++++||+|++..
T Consensus 86 ~~~~~~~~--~~~~~~~~~~~i~~~l~~------------im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~ 151 (334)
T 2qrd_G 86 QSSSFPEA--IAEIDKFRLLGLREVERK------------IGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGE 151 (334)
T ss_dssp HHCSCGGG--GGGGGSCBHHHHHHHHHH------------HTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETT
T ss_pred hccCCccH--HHHHhhhchhhHHHHHHh------------hccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCC
Confidence 2 1110 122334445555443322 345566 89999999999999999999999999975211
Q ss_pred CCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCC
Q 018309 169 AGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVS 248 (358)
Q Consensus 169 ~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~ 248 (358)
.+ ...++|++|.+|+++++...... ......+++++ ..+|.+++.++.+++++.+|++.|.+++++
T Consensus 152 ~~-~~~~~Givt~~dl~~~~~~~~~~----~~~~~~~v~~l---------~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~ 217 (334)
T 2qrd_G 152 TG-SEMIVSVLTQYRILKFISMNCKE----TAMLRVPLNQM---------TIGTWSNLATASMETKVYDVIKMLAEKNIS 217 (334)
T ss_dssp TT-EEEEEEEEEHHHHHHHHHHHCGG----GGGCCCBGGGS---------SCSBCSSCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred cC-ccceEEEeeHHHHHHHHHhhccc----hhhhhCcHHHh---------CCcccCCceEECCCCcHHHHHHHHHHcCCc
Confidence 00 01299999999999988754321 01122233222 113778899999999999999999999999
Q ss_pred EEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCC
Q 018309 249 SIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPG 328 (358)
Q Consensus 249 ~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~ 328 (358)
++||+|++|+++|++|.+|++..+..+.+... +.++.+++..... . + +++++|++++++.+|++.|.+++
T Consensus 218 ~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~---~~~v~~~m~~~~~---~--~--~~~~~v~~~~~l~~~~~~m~~~~ 287 (334)
T 2qrd_G 218 AVPIVNSEGTLLNVYESVDVMHLIQDGDYSNL---DLSVGEALLKRPA---N--F--DGVHTCRATDRLDGIFDAIKHSR 287 (334)
T ss_dssp EEEEECTTCBEEEEEETHHHHHHHTTSCGGGG---GSBHHHHHTTCCT---T--C--CCCCEECTTCBHHHHHHHHHHSC
T ss_pred EEEEEcCCCcEEEEEEHHHHHHHhhccccccc---cCcHHHHHhcccc---c--C--CCCEEECCCCcHHHHHHHHHHcC
Confidence 99999988999999999999997765433222 4677774421000 0 0 37899999999999999999999
Q ss_pred CCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 329 VRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 329 ~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
++++||+| ++|+++|+||..||++++..
T Consensus 288 ~~~l~Vvd-~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 288 VHRLFVVD-ENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp CCEEEEEC-TTCBEEEEEEHHHHHHHHHS
T ss_pred CCEEEEEC-CCCeEEEEEeHHHHHHHHHh
Confidence 99999999 57999999999999999864
No 3
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=100.00 E-value=2.8e-34 Score=267.73 Aligned_cols=296 Identities=30% Similarity=0.516 Sum_probs=230.2
Q ss_pred HHHHHHHHhhhCcccccccCCCCcceEEEEcCCCCHHHHHHHHHHCCCCeeeceeCCCCeEEEeeehHHHHHHHHHhccC
Q 018309 16 LIYSFLVIVYLHSCPHIQYTSSFLTQVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTN 95 (358)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~sl~~a~~~m~~~~i~~~pV~d~~~~~~vGilt~~Di~~~l~~~~~~ 95 (358)
.+..| |+..+++|+|+ .++++++++.++|+.+|++.|.+++++++||+|.+.++++|+++..|++..+......
T Consensus 27 ~~~~~---l~~~~v~dim~---p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~ 100 (330)
T 2v8q_E 27 VYTTF---MKSHRCYDLIP---TSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKS 100 (330)
T ss_dssp HHHHH---HHHSBGGGGSC---SEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHH---HHcCcHhhhcc---CCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhc
Confidence 44555 56999999995 3478999999999999999999999999999998768999999999999866543211
Q ss_pred CCCCCHHHHhhcchHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceE
Q 018309 96 GSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEI 175 (358)
Q Consensus 96 ~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~ 175 (358)
+. .....+....+..+.... +.+|.++++++++++++.+|++.|.+++++++||+|+ ++| ++
T Consensus 101 ~~-~~~~~l~~~~~~~~~~~~------------~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~---~~ 162 (330)
T 2v8q_E 101 AL-VQIYELEEHKIETWREVY------------LQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP--ESG---NT 162 (330)
T ss_dssp HT-TTCCCGGGCBHHHHHHHH------------SSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT--TTC---CE
T ss_pred cc-cchhHHhhccHHHHHHHH------------hhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC--CCC---cE
Confidence 10 001223344444443211 2368889999999999999999999999999999963 134 79
Q ss_pred EEeechHhHHHHHHhhcccCCCCcccccccccccccccccccccccCC-CCceEecCCCCHHHHHHHHHhCCCCEEEEEc
Q 018309 176 LYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANG-RPFAMLRPTASLGSALALLVQADVSSIPIVD 254 (358)
Q Consensus 176 vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~-~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd 254 (358)
+|++|.+|+++++.......+ ...+...+++++.+ |. +++.++.+++++.++++.|.+++++++||+|
T Consensus 163 ~Givt~~dl~~~~~~~~~~~~-~~~~~~~~v~~~~v----------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 231 (330)
T 2v8q_E 163 LYILTHKRILKFLKLFITEFP-KPEFMSKSLEELQI----------GTYANIAMVRTTTPVYVALGIFVQHRVSALPVVD 231 (330)
T ss_dssp EEEECHHHHHHHHHHHSCSSS-CCGGGGSBHHHHTC----------SBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEEC
T ss_pred EEEEcHHHHHHHHHHHhhccC-chhhhcCCHHHhcc----------cCcCCceEECCCCCHHHHHHHHHHcCCCeEEEEC
Confidence 999999999998876543211 01122333333321 33 5788999999999999999999999999999
Q ss_pred CCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEE
Q 018309 255 DNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVI 334 (358)
Q Consensus 255 ~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~V 334 (358)
++|+++|++|.+|++.....+.+..+ +.++.+++..+. .|.+++++|++++++.+|++.|.+++++++||
T Consensus 232 ~~~~l~Giit~~dl~~~~~~~~~~~~---~~~v~~~~~~~~-------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~V 301 (330)
T 2v8q_E 232 EKGRVVDIYSKFDVINLAAEKTYNNL---DVSVTKALQHRS-------HYFEGVLKCYLHETLEAIINRLVEAEVHRLVV 301 (330)
T ss_dssp TTSBEEEEEEGGGTGGGGGSSCCCCC---SSBHHHHGGGCC-------SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEE
T ss_pred CCCcEEEEEEHHHHHHHHhccccccc---cCcHHHHHhccc-------cccCCCeEECCCCcHHHHHHHHHHCCCcEEEE
Confidence 89999999999999986654433222 467888664322 45678999999999999999999999999999
Q ss_pred EeCCCCeEEEEEehHHHHHHhhc
Q 018309 335 VEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 335 vd~~~~~liGvis~~Dil~~~~~ 357 (358)
+| ++|+++|+||..||++++..
T Consensus 302 vd-~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 302 VD-EHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp EC-TTSBEEEEEEHHHHHHHHHS
T ss_pred Ec-CCCcEEEEEeHHHHHHHHHh
Confidence 99 47999999999999999864
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=1.6e-33 Score=256.02 Aligned_cols=262 Identities=14% Similarity=0.284 Sum_probs=205.3
Q ss_pred ceEEEEcCCCCHHHHHHHHHHCCCCeeeceeCCCCeEEEeeehHHHHHHHHHhccCCCCCCHHHHhhcchHHHHHHHHhh
Q 018309 40 TQVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQL 119 (358)
Q Consensus 40 ~~vv~~~~~~sl~~a~~~m~~~~i~~~pV~d~~~~~~vGilt~~Di~~~l~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~ 119 (358)
++++++++++|+.+|++.|.++++.++||+|++.++++|++|..|++..+..... ...++....... ....
T Consensus 12 ~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~------~~~~~~~~~~~~---~~~~ 82 (280)
T 3kh5_A 12 KKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSK------YNLIREKHERNF---LAAI 82 (280)
T ss_dssp SCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGG------GHHHHTTSTTCH---HHHT
T ss_pred CCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccch------hhhhhhccccch---hHHh
Confidence 4799999999999999999999999999999767899999999999975531110 011111100000 0000
Q ss_pred ccccccCCCCCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCc
Q 018309 120 NLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSL 199 (358)
Q Consensus 120 ~~~~~~d~~~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~ 199 (358)
...++.+|.++++++++++++.+|++.|.+++++++||+|+ +| +++|++|.+|+++++......
T Consensus 83 -----~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~----- 146 (280)
T 3kh5_A 83 -----NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND---EN---QLISLITERDVIRALLDKIDE----- 146 (280)
T ss_dssp -----TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHGGGSCT-----
T ss_pred -----hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC---CC---EEEEEEEHHHHHHHHhhcCCC-----
Confidence 11234478889999999999999999999999999999975 45 899999999999976543211
Q ss_pred ccccccccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccc-c
Q 018309 200 PILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAY-A 278 (358)
Q Consensus 200 ~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~-~ 278 (358)
. ..++++|.+++.++.+++++.++++.|.+++++++||+ ++|+++|++|.+|++..+..+.. .
T Consensus 147 ---~------------~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~ 210 (280)
T 3kh5_A 147 ---N------------EVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFN 210 (280)
T ss_dssp ---T------------CBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHH
T ss_pred ---C------------CCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhh
Confidence 1 13455688889999999999999999999999999999 68999999999999987653221 1
Q ss_pred ccc------cccccHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHH
Q 018309 279 QIH------LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVF 352 (358)
Q Consensus 279 ~l~------~~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil 352 (358)
.+. ..+.++.+ +|.+++++|++++++.+|++.|.+++++++||+| ++|+++|+||.+||+
T Consensus 211 ~~~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Givt~~dil 276 (280)
T 3kh5_A 211 HMQTGNVREITNVRMEE-------------IMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVD-ENLRIKGIITEKDVL 276 (280)
T ss_dssp HHHSCCTHHHHHCBHHH-------------HSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEEC-TTCBEEEEEEHHHHG
T ss_pred hhcccchhhhhCCcHHH-------------HhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEEC-CCCeEEEEEeHHHHH
Confidence 000 01234555 7778899999999999999999999999999999 578999999999999
Q ss_pred HHhh
Q 018309 353 RFLL 356 (358)
Q Consensus 353 ~~~~ 356 (358)
+++.
T Consensus 277 ~~la 280 (280)
T 3kh5_A 277 KYFA 280 (280)
T ss_dssp GGGC
T ss_pred HhhC
Confidence 9863
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=100.00 E-value=8.6e-33 Score=253.74 Aligned_cols=262 Identities=10% Similarity=0.089 Sum_probs=207.0
Q ss_pred cccccccCCCCcceEEEEcCCCCHHHHHHHHHHCCCCeeeceeCCCCeEEEeeehHHHHHHHHHhccCCCCCCHHHHhhc
Q 018309 28 SCPHIQYTSSFLTQVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETH 107 (358)
Q Consensus 28 ~~~~~~~~~~~~~~vv~~~~~~sl~~a~~~m~~~~i~~~pV~d~~~~~~vGilt~~Di~~~l~~~~~~~~~~~~~~l~~~ 107 (358)
++.|+|. ++++++++++|+.+|++.|.++++.++||+| ++++|++|..|++..+..... . ..
T Consensus 21 ~V~dim~-----~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~----~------~~ 82 (296)
T 3ddj_A 21 NIETLMI-----KNPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCK----D------SC 82 (296)
T ss_dssp SGGGTCE-----ESCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC-------------C
T ss_pred CHHHhcc-----CCCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhccccc----c------cc
Confidence 3557763 4789999999999999999999999999998 799999999999975431110 0 00
Q ss_pred chHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHH
Q 018309 108 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 187 (358)
Q Consensus 108 ~i~~~~~~~~~~~~~~~~d~~~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~ 187 (358)
....+.... ...++.+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|++++
T Consensus 83 ~~~~~~~~~--------~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~lvGivt~~dl~~~ 148 (296)
T 3ddj_A 83 SQGDLYHIS--------TTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDI---ND---KPVGIVTEREFLLL 148 (296)
T ss_dssp CHHHHHHHH--------TSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHGGG
T ss_pred cchhhHHHh--------cccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHh
Confidence 011111000 11233478889999999999999999999999999999965 45 79999999999875
Q ss_pred HHhhcccCCCCcccccccccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHH
Q 018309 188 ICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSD 267 (358)
Q Consensus 188 l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~d 267 (358)
+.... .. ..++++|.+++.++.+++++.++++.|.+++++++||+|++|+++|++|.+|
T Consensus 149 ~~~~~---------~~------------~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~d 207 (296)
T 3ddj_A 149 YKDLD---------EI------------FPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVN 207 (296)
T ss_dssp GGGSC---------CC------------CBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHH
T ss_pred hhccc---------cc------------ccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHH
Confidence 42211 11 2455668888999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccccccc---cccccHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEE
Q 018309 268 ITALAKDKAYAQIH---LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEG 344 (358)
Q Consensus 268 l~~~~~~~~~~~l~---~~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liG 344 (358)
++..+... +..+. ..+.++.+ +|.+++++|++++++.+|++.|.+++++++||+| ++|+++|
T Consensus 208 l~~~~~~~-~~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~~g~~~G 272 (296)
T 3ddj_A 208 AIKQLAKA-VDKLDPDYFYGKVVKD-------------VMVTNLVTIDELASVNRAAAEMIVKRIGSLLILN-KDNTIRG 272 (296)
T ss_dssp HHHHHHHH-HHHTCTHHHHTCBHHH-------------HSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEE
T ss_pred HHHHHHHH-HhhcChhhhcCcCHHH-------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEE
Confidence 99876522 11110 11345565 7777899999999999999999999999999999 4799999
Q ss_pred EEehHHHHHHhhc
Q 018309 345 IISLSDVFRFLLG 357 (358)
Q Consensus 345 vis~~Dil~~~~~ 357 (358)
+||+.||++++..
T Consensus 273 iit~~Dil~~l~~ 285 (296)
T 3ddj_A 273 IITERDLLIALHH 285 (296)
T ss_dssp EEEHHHHHHHHHH
T ss_pred EEcHHHHHHHHHH
Confidence 9999999999863
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=1.1e-30 Score=237.75 Aligned_cols=257 Identities=16% Similarity=0.242 Sum_probs=179.1
Q ss_pred ceEEEEcCCCCHHHHHHHHHHCCCCeeeceeCCCCeEEEeeehHHHHHHHHHhccCCCCCCHHHHhhcchHHHHHHHHhh
Q 018309 40 TQVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQL 119 (358)
Q Consensus 40 ~~vv~~~~~~sl~~a~~~m~~~~i~~~pV~d~~~~~~vGilt~~Di~~~l~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~ 119 (358)
++++++++++|+.+|++.|.++++.++||+|+ .++++|+++..|++..+. + ..
T Consensus 9 ~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~-------~--------~~----------- 61 (282)
T 2yzq_A 9 QNPVTITLPATRNYALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPD-------E--------EQ----------- 61 (282)
T ss_dssp ESCCCEESSCC------------CCEEEEECT-TCCEEEEEESSCC----------------------------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhc-------c--------CC-----------
Confidence 46788999999999999999999999999986 479999999999774221 0 00
Q ss_pred ccccccCCCCCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHH-HHHhhcccCCCC
Q 018309 120 NLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICRHFKHSSSS 198 (358)
Q Consensus 120 ~~~~~~d~~~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~-~l~~~~~~~~~~ 198 (358)
++.+|.++++++++++++.+|++.|.+++.+++||+|+ +| +++|++|..|+++ ++....
T Consensus 62 --------v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~di~~~~~~~~~------ 121 (282)
T 2yzq_A 62 --------LAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS---KG---KPVGILTVGDIIRRYFAKSE------ 121 (282)
T ss_dssp ----------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTCS------
T ss_pred --------HHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHhccC------
Confidence 11256677899999999999999999999999999975 35 7999999999988 554210
Q ss_pred cccccccccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHH------HHH
Q 018309 199 LPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT------ALA 272 (358)
Q Consensus 199 ~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~------~~~ 272 (358)
.... ..++++|.++++++.+++++.++++.|.+++++++||+|++|+++|++|.+|++ +..
T Consensus 122 -~~~~------------~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~ 188 (282)
T 2yzq_A 122 -KYKG------------VEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIM 188 (282)
T ss_dssp -GGGG------------CBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--
T ss_pred -Cccc------------CcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhh
Confidence 0011 234566888899999999999999999999999999999889999999999998 322
Q ss_pred hccc--ccc-ccc-ccccHHHHHhc--CCCCCCCc-ccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEE
Q 018309 273 KDKA--YAQ-IHL-DEMNIHQALQL--GQDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGI 345 (358)
Q Consensus 273 ~~~~--~~~-l~~-~~~~v~~~l~~--~~~~~~~~-~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGv 345 (358)
.... ... ..+ .......+... ......+. ++|.+++++|++++++.+|++.|.+++++++||+| ++|+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~lvGi 267 (282)
T 2yzq_A 189 KSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIR-GEGDLIGL 267 (282)
T ss_dssp ------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTTEEEEE
T ss_pred ccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEEC-CCCCEEEE
Confidence 1000 000 000 00000000000 00011222 28889999999999999999999999999999999 47899999
Q ss_pred EehHHHHHHhhc
Q 018309 346 ISLSDVFRFLLG 357 (358)
Q Consensus 346 is~~Dil~~~~~ 357 (358)
||++||++++..
T Consensus 268 it~~Dil~~~~~ 279 (282)
T 2yzq_A 268 IRDFDLLKVLVK 279 (282)
T ss_dssp EEHHHHGGGGCC
T ss_pred EeHHHHHHHHHh
Confidence 999999998754
No 7
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.92 E-value=2.6e-24 Score=195.14 Aligned_cols=195 Identities=18% Similarity=0.330 Sum_probs=157.1
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccc-ccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ-PVSSI 209 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~-~v~~l 209 (358)
+|.++++++++++|+.+|++.|.+++++++||+++ ++| +++|++|.+|+++++...... ..... ....+
T Consensus 9 i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~--~~~---~~~Givt~~di~~~~~~~~~~-----~~~~~~~~~~~ 78 (280)
T 3kh5_A 9 AQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNA--GNN---KVVGIITSMDIVDFMGGGSKY-----NLIREKHERNF 78 (280)
T ss_dssp SCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECT--TTC---BEEEEEEHHHHHHHTTTSGGG-----HHHHTTSTTCH
T ss_pred hcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEEC--CCC---eEEEEEEHHHHHHHhcccchh-----hhhhhccccch
Confidence 57789999999999999999999999999999963 235 899999999999976432211 00000 00000
Q ss_pred ccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHH
Q 018309 210 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 289 (358)
Q Consensus 210 ~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~ 289 (358)
+.....+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++..+...... ..++.+
T Consensus 79 -~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~v~~ 152 (280)
T 3kh5_A 79 -LAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDE-----NEVIDD 152 (280)
T ss_dssp -HHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCT-----TCBSGG
T ss_pred -hHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCC-----CCCHHH
Confidence 11112467788999999999999999999999999999999999999999999999999876543211 224444
Q ss_pred HHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 290 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 290 ~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.+++.++++++++.++++.|.+++++++||++ +|+++|+||..|+++++.
T Consensus 153 -------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~--~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 153 -------------YITRDVIVATPGERLKDVARTMVRNGFRRLPVVS--EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp -------------GCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHT
T ss_pred -------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHh
Confidence 7777899999999999999999999999999996 489999999999999874
No 8
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.90 E-value=5.9e-24 Score=194.76 Aligned_cols=192 Identities=18% Similarity=0.214 Sum_probs=157.6
Q ss_pred CCCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccc
Q 018309 128 NGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 207 (358)
Q Consensus 128 ~~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~ 207 (358)
++++|.++++++++++++.+|++.|.+++++++||++ | +++|++|..|+++++...... .....
T Consensus 22 V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-----~---~l~GivT~~Di~~~~~~~~~~--------~~~~~ 85 (296)
T 3ddj_A 22 IETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-----E---KIEGLLTTRDLLSTVESYCKD--------SCSQG 85 (296)
T ss_dssp GGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-----S---SEEEEEEHHHHHGGGTTCC-----------CCHH
T ss_pred HHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-----C---eEEEEEeHHHHHHHhcccccc--------cccch
Confidence 3457888999999999999999999999999999994 4 799999999999966422111 00111
Q ss_pred ccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccH
Q 018309 208 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNI 287 (358)
Q Consensus 208 ~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v 287 (358)
.+ +.....+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++..+.... ...++
T Consensus 86 ~~-~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~------~~~~v 158 (296)
T 3ddj_A 86 DL-YHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLD------EIFPV 158 (296)
T ss_dssp HH-HHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSC------CCCBH
T ss_pred hh-HHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhccc------ccccH
Confidence 10 001123577779889999999999999999999999999999999999999999999998654221 13577
Q ss_pred HHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 288 HQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 288 ~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
.+ +|.+++.++++++++.+|++.|.+++++++||+| ++|+++|+||..|+++++.
T Consensus 159 ~~-------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 159 KV-------------FMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVID-DDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HH-------------HSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred HH-------------hhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 77 6777899999999999999999999999999999 4799999999999998864
No 9
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.88 E-value=2.1e-22 Score=187.40 Aligned_cols=205 Identities=18% Similarity=0.243 Sum_probs=158.7
Q ss_pred CC--CCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 131 PC--PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 131 ~~--~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+| ..+++++++++++.+|++.|.+++++++||+++ +.+ +++|+++..|++.++......... ....+..
T Consensus 40 im~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~--~~~---~~vGivt~~Dll~~l~~~~~~~~~----~~~~l~~ 110 (330)
T 2v8q_E 40 LIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDS--KKQ---SFVGMLTITDFINILHRYYKSALV----QIYELEE 110 (330)
T ss_dssp GSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEET--TTT---EEEEEEEHHHHHHHHHHHHHHHTT----TCCCGGG
T ss_pred hccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHHhcccc----chhHHhh
Confidence 67 778999999999999999999999999999975 224 799999999999987654311000 0011122
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcC-CCcEEEEEeHHHHHHHHhccccc--ccccccc
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD-NDSLLDIYSRSDITALAKDKAYA--QIHLDEM 285 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~-~g~liGiis~~dl~~~~~~~~~~--~l~~~~~ 285 (358)
..+..+...++++|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|++|.+|++..+...... ...+...
T Consensus 111 ~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 190 (330)
T 2v8q_E 111 HKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSK 190 (330)
T ss_dssp CBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGGS
T ss_pred ccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhcC
Confidence 22233334556778999999999999999999999999999999998 89999999999999866432110 0011123
Q ss_pred cHHHHHhcCCCCCCCcccCC-ccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 286 NIHQALQLGQDANPSLGFNG-QRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 286 ~v~~~l~~~~~~~~~~~~~~-~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
++.+.. +|. +++.++++++++.++++.|.+++++++||+| ++|+++|+||..|+++++.
T Consensus 191 ~v~~~~-----------v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~~~l~Giit~~dl~~~~~ 250 (330)
T 2v8q_E 191 SLEELQ-----------IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVD-EKGRVVDIYSKFDVINLAA 250 (330)
T ss_dssp BHHHHT-----------CSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEEC-TTSBEEEEEEGGGTGGGGG
T ss_pred CHHHhc-----------ccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEEC-CCCcEEEEEEHHHHHHHHh
Confidence 444411 344 6789999999999999999999999999999 4799999999999998764
No 10
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.88 E-value=4.8e-22 Score=184.30 Aligned_cols=199 Identities=17% Similarity=0.256 Sum_probs=151.2
Q ss_pred CCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccccc
Q 018309 133 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 212 (358)
Q Consensus 133 ~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~ 212 (358)
..++++++.+.|+.+|++.|.+++++++||+|+ +.+ +++|++|..|++.++......... ...+......
T Consensus 39 ~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~--~~~---~lvGilt~~Dl~~~l~~~~~~~~~-----~~~l~~~~~~ 108 (323)
T 3t4n_C 39 SYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDS--KTS---RFAGLLTTTDFINVIQYYFSNPDK-----FELVDKLQLD 108 (323)
T ss_dssp EEEEEEEETTSBHHHHHHHHHHTTCSCEEEEET--TTT---EEEEEECHHHHHHHHHHHHHCGGG-----GGGGGGCBHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeC--CCC---eEEEEEEHHHHHHHHHHHHcCcch-----hHHHHHHHHH
Confidence 456889999999999999999999999999974 233 899999999999987654322110 0011111100
Q ss_pred ccc--ccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCc-----EEEEEeHHHHHHHHhcccccccccccc
Q 018309 213 TWV--PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDS-----LLDIYSRSDITALAKDKAYAQIHLDEM 285 (358)
Q Consensus 213 ~~~--~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~-----liGiis~~dl~~~~~~~~~~~l~~~~~ 285 (358)
.+. .++.++|.++++++.+++++.+|++.|.+++++++||+|+++. ++|++|.+|++..+...... ....+.
T Consensus 109 ~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-~~~~~~ 187 (323)
T 3t4n_C 109 GLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-THFLKI 187 (323)
T ss_dssp HHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG-GGGCCS
T ss_pred HHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc-hhhhhC
Confidence 000 1234557788999999999999999999999999999998775 99999999999866432211 112234
Q ss_pred cHHHHHhcCCCCCCCccc---CCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 286 NIHQALQLGQDANPSLGF---NGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 286 ~v~~~l~~~~~~~~~~~~---~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
++.+ + |.++++++++++++.+|++.|.+++++++||+| ++|+++|+||..|+++++.
T Consensus 188 ~v~~-------------~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd-~~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 188 PIGD-------------LNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID-ENGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp BGGG-------------TTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEETTHHHHHHH
T ss_pred cHHH-------------cCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEeHHHHHHHHh
Confidence 5555 4 778899999999999999999999999999999 5799999999999999864
No 11
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.87 E-value=4.8e-22 Score=180.50 Aligned_cols=173 Identities=16% Similarity=0.235 Sum_probs=130.8
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
+|.++++++++++++.+|++.|.+++++++||+|+ +| +++|+++..|+++.+. +.
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~---~~---~~~Giv~~~dl~~~~~-------------~~------ 60 (282)
T 2yzq_A 6 IMTQNPVTITLPATRNYALELFKKYKVRSFPVVNK---EG---KLVGIISVKRILVNPD-------------EE------ 60 (282)
T ss_dssp HSEESCCCEESSCC------------CCEEEEECT---TC---CEEEEEESSCC--------------------------
T ss_pred hccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC---CC---cEEEEEEHHHHHhhhc-------------cC------
Confidence 46678899999999999999999999999999974 45 8999999999986321 12
Q ss_pred cccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH-HHhcccccccccccccHHH
Q 018309 211 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQ 289 (358)
Q Consensus 211 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~-~~~~~~~~~l~~~~~~v~~ 289 (358)
.++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|++. .+..+.. . .+.++.+
T Consensus 61 ------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~-~---~~~~v~~ 130 (282)
T 2yzq_A 61 ------QLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEK-Y---KGVEIEP 130 (282)
T ss_dssp ---------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSG-G---GGCBSTT
T ss_pred ------CHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCC-c---ccCcHHH
Confidence 344557777899999999999999999999999999998899999999999998 6543210 0 1233343
Q ss_pred HHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHH
Q 018309 290 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVF 352 (358)
Q Consensus 290 ~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil 352 (358)
+|..+++++++++++.++++.|.+++++++||+| ++|+++|+||..|++
T Consensus 131 -------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 131 -------------YYQRYVSIVWEGTPLKAALKALLLSNSMALPVVD-SEGNLVGIVDETDLL 179 (282)
T ss_dssp -------------TSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEEC-TTSCEEEEEEGGGGG
T ss_pred -------------HhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHh
Confidence 7777899999999999999999999999999999 479999999999998
No 12
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.86 E-value=3.9e-21 Score=178.95 Aligned_cols=207 Identities=14% Similarity=0.147 Sum_probs=151.2
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 131 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 131 ~~~--~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+|. .+++++++++++.+|++.|.+++++++||+++ +.+ +++|+++.+|++.++......... .. ....+..
T Consensus 27 im~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~--~~~---~~vGiv~~~Dl~~~~~~~~~~~~~-~~-~~~~~~~ 99 (334)
T 2qrd_G 27 VLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDS--EAN---KFAGLLTMADFVNVIKYYYQSSSF-PE-AIAEIDK 99 (334)
T ss_dssp GSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEET--TTT---EEEEEECHHHHHHHHHHHHHHCSC-GG-GGGGGGS
T ss_pred hCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHhhccCC-cc-HHHHHhh
Confidence 454 45789999999999999999999999999975 224 899999999999877543221000 00 0001111
Q ss_pred cccccccccccccCCCCc--eEecCCCCHHHHHHHHHhCCCCEEEEEcCCCc-----EEEEEeHHHHHHHHhcccccccc
Q 018309 209 IQLGTWVPRIGEANGRPF--AMLRPTASLGSALALLVQADVSSIPIVDDNDS-----LLDIYSRSDITALAKDKAYAQIH 281 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~--~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~-----liGiis~~dl~~~~~~~~~~~l~ 281 (358)
..+..+....+++|..++ +++.+++++.++++.|.+++.+++||+|++|. ++|++|.+|++..+..+.. ...
T Consensus 100 ~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~-~~~ 178 (334)
T 2qrd_G 100 FRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCK-ETA 178 (334)
T ss_dssp CBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCG-GGG
T ss_pred hchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhcc-chh
Confidence 111111111233455566 89999999999999999999999999997654 9999999999986643211 111
Q ss_pred cccccHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 282 LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 282 ~~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+...++.+.. .+|.+++.++++++++.+|++.|.+++.+++||+| ++|+++|+||..|+++++.
T Consensus 179 ~~~~~v~~l~----------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd-~~~~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 179 MLRVPLNQMT----------IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVN-SEGTLLNVYESVDVMHLIQ 242 (334)
T ss_dssp GCCCBGGGSS----------CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEETHHHHHHHT
T ss_pred hhhCcHHHhC----------CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEc-CCCcEEEEEEHHHHHHHhh
Confidence 1123444310 03677899999999999999999999999999999 4799999999999999764
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.85 E-value=1.1e-21 Score=165.13 Aligned_cols=137 Identities=16% Similarity=0.256 Sum_probs=105.2
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhccccccc---ccccccH---HHH
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQI---HLDEMNI---HQA 290 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l---~~~~~~v---~~~ 290 (358)
+|+++|+++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++.......... ....... ...
T Consensus 19 ~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
T 4esy_A 19 PIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHL 98 (170)
T ss_dssp BGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHH
T ss_pred CHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhh
Confidence 4677799999999999999999999999999999999999999999999999764321110000 0000000 000
Q ss_pred HhcCCCCCCCc-ccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 291 LQLGQDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 291 l~~~~~~~~~~-~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
... ....+. ++|++++++|++++++.+|++.|.+++++++||+|+ |+++|+||.+||+++++.
T Consensus 99 ~~~--~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~--g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 99 FET--GRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD--GVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHH--HTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHTTTSCC
T ss_pred hcc--ccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHHHHHHHh
Confidence 000 001112 288899999999999999999999999999999993 899999999999998864
No 14
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.82 E-value=4.3e-20 Score=153.15 Aligned_cols=123 Identities=18% Similarity=0.275 Sum_probs=101.6
Q ss_pred cccCC--CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 018309 219 GEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 296 (358)
Q Consensus 219 ~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 296 (358)
.++|. .+++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++..+...........+.++.+
T Consensus 18 ~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~------- 90 (156)
T 3k6e_A 18 ETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH------- 90 (156)
T ss_dssp GGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG-------
T ss_pred HHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHH-------
Confidence 34454 468999999999999999999999999999999999999999999986654432222222344554
Q ss_pred CCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 297 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 297 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.++++ +|||| ++|+++|+||++||++++.+
T Consensus 91 ------im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd-~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 91 ------MTKTDVAVVSPDFTITEVLHKLVDESF--LPVVD-AEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp ------TCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred ------hhcCCceecccccHHHHHHHHHHHcCC--eEEEe-cCCEEEEEEEHHHHHHHHHH
Confidence 888899999999999999999998764 99999 58999999999999999843
No 15
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.82 E-value=1.7e-19 Score=147.95 Aligned_cols=119 Identities=16% Similarity=0.305 Sum_probs=106.3
Q ss_pred cccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~-g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++.....+. +.++.+
T Consensus 24 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 92 (148)
T 3lv9_A 24 KIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-------KIELEE---- 92 (148)
T ss_dssp BGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------CCCGGG----
T ss_pred CHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------CccHHH----
Confidence 56777987 89999999999999999999999999999987 89999999999998654331 245555
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+| ++++++++++++.+|++.|.+++++++||+| ++|+++|+||..|+++++++
T Consensus 93 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 93 ---------IL-RDIIYISENLTIDKALERIRKEKLQLAIVVD-EYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp ---------TC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC-TTSSEEEEEEHHHHHHHHHH
T ss_pred ---------hc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 77 7899999999999999999999999999999 57999999999999999875
No 16
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.81 E-value=1.6e-19 Score=144.77 Aligned_cols=120 Identities=15% Similarity=0.281 Sum_probs=105.4
Q ss_pred cccccCC--CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~-g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++.....+. .+.++.+
T Consensus 7 ~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~------~~~~v~~---- 76 (130)
T 3i8n_A 7 PVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS------GQKQLGA---- 76 (130)
T ss_dssp CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT------TTSBHHH----
T ss_pred CHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC------CcCCHHH----
Confidence 5677788 456789999999999999999999999999987 89999999999998765432 1456777
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+| +++.++++++++.+|++.|.+++++++||+| ++|+++|+||..|+++++++
T Consensus 77 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 77 ---------VM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVD-EYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ---------HS-EECCEEETTSCHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHHHHHT
T ss_pred ---------Hh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEc-CCCCEEEEEEHHHHHHHHcC
Confidence 66 4688999999999999999999999999999 57999999999999999976
No 17
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.80 E-value=2.3e-19 Score=141.98 Aligned_cols=119 Identities=19% Similarity=0.372 Sum_probs=105.9
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 296 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 296 (358)
+++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|++|.+|+...+..+ ..++.+
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~--------~~~v~~------- 66 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN--------KKTIEE------- 66 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT--------CCBGGG-------
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc--------ccCHHH-------
Confidence 35677998999999999999999999999999999999999999999999999866532 234555
Q ss_pred CCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 297 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 297 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.+++.+++||+| ++|+++|+||..|+++++.+
T Consensus 67 ------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 67 ------IMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVD-DYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp ------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHC-
T ss_pred ------HhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEEC-CCCCEEEEEeHHHHHHHhhc
Confidence 6777899999999999999999999999999999 57999999999999999864
No 18
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.80 E-value=1.1e-19 Score=145.08 Aligned_cols=120 Identities=13% Similarity=0.369 Sum_probs=102.7
Q ss_pred cccccCCCC--ceEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANGRP--FAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~-g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|.+. ++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++..+.... .+.++.+
T Consensus 4 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~------~~~~v~~---- 73 (127)
T 3nqr_A 4 RVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA------EAFSMDK---- 73 (127)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC------CCCCHHH----
T ss_pred CHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC------CCCCHHH----
Confidence 456678744 8899999999999999999999999999987 89999999999987553221 1457777
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|. ++.++++++++.+|++.|.+++++++||+| ++|+++|+||+.|+++++++
T Consensus 74 ---------~m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 74 ---------VLR-TAVVVPESKRVDRMLKEFRSQRYHMAIVID-EFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp ---------HCB-CCCEEETTCBHHHHHHHHHHTTCCEEEEEC-TTSCEEEEEEHHHHHHHC--
T ss_pred ---------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 553 478999999999999999999999999999 58999999999999999875
No 19
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.80 E-value=3e-19 Score=143.32 Aligned_cols=122 Identities=11% Similarity=0.190 Sum_probs=104.0
Q ss_pred cccccCC--CCceEecCCCCHHHHHHHHHhCCCCEEEEEcC-CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDD-NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~-~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|. ++++++.+++++.+|++.|.+++++++||+|+ +|+++|++|.+|++....++.. +...++.+
T Consensus 3 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~----~~~~~v~~---- 74 (130)
T 3hf7_A 3 SVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE----FTKEIMLR---- 74 (130)
T ss_dssp BHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC----CCHHHHHH----
T ss_pred CHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc----cchhhHHH----
Confidence 3566685 36889999999999999999999999999975 5899999999999987654321 11245565
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+| ++++++++++++.+|++.|.+++++++||+| ++|+++|+||..|+++++++
T Consensus 75 ---------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 75 ---------AA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVD-EYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp ---------HS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEEC-TTSCEEEEEEHHHHHHHHHC
T ss_pred ---------hc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEc-CCCCEEEEeeHHHHHHHHhC
Confidence 55 5789999999999999999999999999999 57999999999999999876
No 20
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.79 E-value=8.9e-19 Score=147.56 Aligned_cols=119 Identities=18% Similarity=0.329 Sum_probs=106.5
Q ss_pred cccccCC--CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~-g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++.....+. ..++.+
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~---- 111 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE-------RLELVD---- 111 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-------CCCGGG----
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-------cccHHH----
Confidence 5677788 678999999999999999999999999999987 99999999999998765331 345565
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+| ++++++++++++.+|++.|.+++++++||+| ++|+++|+||+.||++++++
T Consensus 112 ---------im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd-~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 112 ---------LV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD-EYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp ---------GC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHT
T ss_pred ---------Hh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe-CCCCEEEEeeHHHHHHHHhC
Confidence 77 7899999999999999999999999999999 57999999999999999875
No 21
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.79 E-value=2.5e-19 Score=143.52 Aligned_cols=118 Identities=14% Similarity=0.325 Sum_probs=101.8
Q ss_pred cccccCC--CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~-g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++...... +.++.+
T Consensus 6 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--------~~~v~~---- 73 (129)
T 3jtf_A 6 TVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP--------ALDIRS---- 73 (129)
T ss_dssp BHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT--------TSCGGG----
T ss_pred CHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC--------CcCHHH----
Confidence 4666787 668899999999999999999999999999985 8999999999998754321 345555
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|. +++++++++++.+|++.|.+++.+++||+| ++|+++|+||+.|+++++++
T Consensus 74 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd-~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 74 ---------LVR-PAVFIPEVKRLNVLLREFRASRNHLAIVID-EHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp ---------GCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEEC-C-CCEEEEEEHHHHHHHHHH
T ss_pred ---------HhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 553 578999999999999999999999999999 57999999999999999875
No 22
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.79 E-value=1.2e-18 Score=138.31 Aligned_cols=120 Identities=18% Similarity=0.232 Sum_probs=105.3
Q ss_pred ccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 018309 218 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDA 297 (358)
Q Consensus 218 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~ 297 (358)
++++|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|++|.+|++..+.++.. ..+.++.+
T Consensus 3 v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~----~~~~~v~~-------- 69 (125)
T 1pbj_A 3 VEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDD----LAEVKVWE-------- 69 (125)
T ss_dssp HHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCC----TTTSBHHH--------
T ss_pred HHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCc----ccccCHHH--------
Confidence 5567888899999999999999999999999999999 8999999999999986654321 12467777
Q ss_pred CCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 298 NPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 298 ~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.++++.|.+++.+++||+| + |+++|+||..|+++++.+
T Consensus 70 -----~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 70 -----VMERDLVTISPRATIKEAAEKMVKNVVWRLLVEE-D-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp -----HCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHC-
T ss_pred -----HcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 6777899999999999999999999999999999 5 999999999999998864
No 23
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.78 E-value=1e-18 Score=143.92 Aligned_cols=123 Identities=34% Similarity=0.581 Sum_probs=101.2
Q ss_pred CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCccc
Q 018309 224 RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGF 303 (358)
Q Consensus 224 ~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~ 303 (358)
+++.++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.....+.+... +.++.+++..+. .
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~---~~~v~~~m~~~~-------~ 98 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNL---DVSVTKALQHRS-------H 98 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCT---TSBGGGGGGTCC-------H
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhh---cchHHHHHhhhh-------c
Confidence 578899999999999999999999999999989999999999999987654422111 345565322100 1
Q ss_pred CCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 304 NGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 304 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
|.+++.++++++++.+|++.|.+++++++||+| ++|+++|+||..||++++..
T Consensus 99 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 99 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVD-ENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp HHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHC-
T ss_pred ccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC-CCCeEEEEEEHHHHHHHHHh
Confidence 226889999999999999999999999999999 47999999999999998863
No 24
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.78 E-value=1.2e-18 Score=141.61 Aligned_cols=121 Identities=17% Similarity=0.210 Sum_probs=105.5
Q ss_pred ccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCC--cEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 216 PRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND--SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 216 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g--~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
.+++++|.+++.++.+++++.+|++.|.+++++++||+|++| +++|++|.+|++..+..+.. .+.++.+
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~---- 75 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLD-----LDGPAMP---- 75 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCC-----TTSBSGG----
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCC-----CCCCHHH----
Confidence 457788999999999999999999999999999999999888 99999999999986643311 1345555
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.+++.+++++ ++.+|++.|.+++++++||+| ++|+++|+||..||++++.
T Consensus 76 ---------~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 76 ---------IANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVN-KNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp ---------GCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHSCHH
T ss_pred ---------HcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEc-CCCcEEEEEEHHHHHHHHH
Confidence 777889999999 999999999999999999999 4799999999999987754
No 25
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.78 E-value=2.9e-18 Score=138.58 Aligned_cols=122 Identities=19% Similarity=0.355 Sum_probs=106.2
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHH-HHHHhcccccccccccccHHHHHhcCC
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDI-TALAKDKAYAQIHLDEMNIHQALQLGQ 295 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl-~~~~~~~~~~~l~~~~~~v~~~l~~~~ 295 (358)
+++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|++|.+|+ ...+..+.+ .+.++.+
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----~~~~v~~------ 77 (138)
T 2p9m_A 9 KVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYT-----LETTIGD------ 77 (138)
T ss_dssp BGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCC-----SSCBHHH------
T ss_pred CHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhccc-----CCcCHHH------
Confidence 5667788889999999999999999999999999999988999999999999 876543221 1456777
Q ss_pred CCCCCcccCCccceEEcCCCCHHHHHHHHhcCC-----CCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 296 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPG-----VRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 296 ~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~-----~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.+++ ++++||+| ++|+++|+||..|+++++.+
T Consensus 78 -------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 78 -------VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD-KNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp -------HSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred -------HhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC-CCCeEEEEEEHHHHHHHHHh
Confidence 67778999999999999999999999 99999999 47999999999999998754
No 26
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.78 E-value=1.1e-18 Score=143.12 Aligned_cols=127 Identities=22% Similarity=0.350 Sum_probs=104.4
Q ss_pred cccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccc---------cccccc
Q 018309 217 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ---------IHLDEM 285 (358)
Q Consensus 217 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~---------l~~~~~ 285 (358)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.......... ....+.
T Consensus 6 ~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
T 4gqw_A 6 TVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGK 85 (152)
T ss_dssp BGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CC
T ss_pred EhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccc
Confidence 56777877 7999999999999999999999999999999999999999999986432110000 001124
Q ss_pred cHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 286 NIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 286 ~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
++.+ +|.++++++++++++.+|++.|.+++++++||+| ++|+++|+||..||++++.+
T Consensus 86 ~v~~-------------~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 86 LVGD-------------LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD-SDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp BHHH-------------HSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC-TTSBEEEEEEHHHHHHHHHC
T ss_pred cHHH-------------hcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCcEEEEEEHHHHHHHHHh
Confidence 4555 6777889999999999999999999999999999 57999999999999999865
No 27
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.78 E-value=8.7e-19 Score=144.61 Aligned_cols=119 Identities=18% Similarity=0.289 Sum_probs=104.6
Q ss_pred cccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEE-cC-CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHh
Q 018309 217 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIV-DD-NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 292 (358)
Q Consensus 217 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVv-d~-~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~ 292 (358)
+++++|.+ +++++.+++++.+|++.|.+++++++||+ |+ +|+++|++|.+|++..+..+. ..++.+
T Consensus 21 ~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~--- 90 (153)
T 3oco_A 21 VASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD-------KAKIST--- 90 (153)
T ss_dssp BHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT-------TSBGGG---
T ss_pred EeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC-------CCcHHH---
Confidence 45666875 78999999999999999999999999999 65 489999999999998654331 345555
Q ss_pred cCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 293 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+| ++++++++++++.+|++.|.+++++++||+| ++|+++|+||+.||++++++
T Consensus 91 ----------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 91 ----------IM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID-EYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp ----------TC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC-TTSCEEEEECHHHHHHHHHC
T ss_pred ----------Hh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe-CCCCEEEEeeHHHHHHHHhc
Confidence 77 7899999999999999999999999999999 57999999999999999875
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.78 E-value=5.9e-19 Score=141.03 Aligned_cols=121 Identities=13% Similarity=0.157 Sum_probs=105.3
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 296 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 296 (358)
+++++|.+++.++.+++++.+|++.|.+++.+++||+|+ |+++|++|.+|+++...++.. ...++.+
T Consensus 6 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~-----~~~~v~~------- 72 (128)
T 3gby_A 6 TFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPT-----VKEKLGE------- 72 (128)
T ss_dssp BGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCC-----TTCBCCG-------
T ss_pred EHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCc-----ccCcHHH-------
Confidence 567779999999999999999999999999999999998 999999999999975432211 0133444
Q ss_pred CCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 297 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 297 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.+++.+++||+| ++|+++|+||..|+++++..
T Consensus 73 ------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd-~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 73 ------ELLETVRSYRPGEQLFDNLISVAAAKCSVVPLAD-EDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ------GGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEEC-TTCBEEEEEEHHHHHHHHHT
T ss_pred ------HccCCCcEECCCCCHHHHHHHHHhCCCcEEEEEC-CCCCEEEEEEHHHHHHHHHh
Confidence 7778899999999999999999999999999999 57999999999999999864
No 29
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.78 E-value=3.3e-19 Score=144.20 Aligned_cols=121 Identities=14% Similarity=0.289 Sum_probs=102.2
Q ss_pred cccccCC--CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~-g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|. +++.++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++..+..+.. ...++.+
T Consensus 4 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~-----~~~~v~~---- 74 (136)
T 3lfr_A 4 QVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADG-----DSDDVKK---- 74 (136)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSG-----GGCCGGG----
T ss_pred ChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccC-----CCcCHHH----
Confidence 4566787 568899999999999999999999999999987 899999999999986542111 1345555
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|. +++++++++++.+|++.|.+++++++||+| ++|+++|+||+.|+++++++
T Consensus 75 ---------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 75 ---------LLR-PATFVPESKRLNVLLREFRANHNHMAIVID-EYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp ---------TCB-CCCEEETTCBHHHHHHHHHHHTCCEEEEEC-TTSCEEEEEEHHHHHTTC--
T ss_pred ---------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe-CCCCEEEEEEHHHHHHHHhC
Confidence 664 489999999999999999999999999999 58999999999999998864
No 30
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.77 E-value=3.8e-18 Score=137.93 Aligned_cols=121 Identities=18% Similarity=0.357 Sum_probs=105.1
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH-HHhcccccccccccccHHHHHhcCC
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQLGQ 295 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~-~~~~~~~~~l~~~~~~v~~~l~~~~ 295 (358)
+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++. .+..+. ....++.+
T Consensus 8 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~~v~~------ 76 (138)
T 2yzi_A 8 PIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-----PYDIPVER------ 76 (138)
T ss_dssp BGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-----CTTSBGGG------
T ss_pred hHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-----cccCCHHH------
Confidence 567779889999999999999999999999999999998899999999999974 333221 11345555
Q ss_pred CCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 296 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 296 ~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.+++++++ |+| ++|+++|+||..||++++.+
T Consensus 77 -------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd-~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 77 -------IMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIE-EEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp -------TCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE-ETTEEEEEEEHHHHHHHHHC
T ss_pred -------HhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC-CCCCEEEEEEHHHHHHHHHH
Confidence 777889999999999999999999999999 999 47999999999999998864
No 31
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.77 E-value=3.1e-18 Score=142.36 Aligned_cols=125 Identities=22% Similarity=0.228 Sum_probs=105.7
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccc----cccccccHHHHHh
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQ----IHLDEMNIHQALQ 292 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~----l~~~~~~v~~~l~ 292 (358)
+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.......... ......++.+
T Consensus 6 ~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~--- 82 (160)
T 2o16_A 6 KVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFE--- 82 (160)
T ss_dssp BGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHH---
T ss_pred cHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHH---
Confidence 567779888999999999999999999999999999998899999999999998654211000 0011355666
Q ss_pred cCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 293 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.++++++++++++.+|++.|.+++++++||+| + |+++|+||..||++++.
T Consensus 83 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 83 ----------VMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA-K-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp ----------HSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE-T-TEEEEEECHHHHHHHHH
T ss_pred ----------HhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 7778899999999999999999999999999999 5 99999999999999875
No 32
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.77 E-value=2.6e-18 Score=137.98 Aligned_cols=120 Identities=18% Similarity=0.258 Sum_probs=105.5
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 296 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 296 (358)
+++++|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|++|.+|+...+..+.. .+.++.+
T Consensus 5 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~------- 71 (133)
T 2ef7_A 5 IVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKS-----LETKAEE------- 71 (133)
T ss_dssp BGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC-----TTCBGGG-------
T ss_pred cHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCC-----cccCHHH-------
Confidence 56777988899999999999999999999999999999 8999999999999886654311 1345555
Q ss_pred CCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 297 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 297 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.+++.++++++++.+|++.|.+++.+++||+| ++|+++|+||..|+++++.
T Consensus 72 ------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd-~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 72 ------FMTASLITIREDSPITGALALMRQFNIRHLPVVD-DKGNLKGIISIRDITRAID 124 (133)
T ss_dssp ------TSEECCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHH
T ss_pred ------HcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHHHHHHH
Confidence 7777899999999999999999999999999999 4799999999999999875
No 33
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.77 E-value=3e-18 Score=139.31 Aligned_cols=126 Identities=25% Similarity=0.464 Sum_probs=101.6
Q ss_pred cCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCC
Q 018309 221 ANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPS 300 (358)
Q Consensus 221 ~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~ 300 (358)
+|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++..+..+.+.. .+.++.+++....
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~---~~~~v~~~m~~~~----- 87 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYND---LSLSVGEALMRRS----- 87 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC-------CCSBHHHHHHHCC-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccccc---CCccHHHHHhcCc-----
Confidence 46678999999999999999999999999999998899999999999998665432211 2467787543210
Q ss_pred cccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 301 LGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 301 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
.-..++.++++++++.+|++.|.+++.+++||+| ++|+++|+||..||++++..
T Consensus 88 --~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 88 --DDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD-DVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp --------CEECTTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHHH
T ss_pred --cccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEEHHHHHHHHHh
Confidence 0001578999999999999999999999999999 47999999999999999864
No 34
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.77 E-value=2.5e-18 Score=141.10 Aligned_cols=119 Identities=12% Similarity=0.242 Sum_probs=105.2
Q ss_pred cccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 018309 217 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 294 (358)
Q Consensus 217 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~ 294 (358)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++..+..+.. +.+.++.+
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~----- 99 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVD----MRDASIAD----- 99 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSC----CTTCBHHH-----
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCC----cccCcHHH-----
Confidence 57778988 89999999999999999999999999999999999999999999987654321 22567787
Q ss_pred CCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHH
Q 018309 295 QDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRF 354 (358)
Q Consensus 295 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~ 354 (358)
+|.+++.++++++++.+|++.|.+++++++||+|+ ++++|+||..||+++
T Consensus 100 --------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~~Giit~~dil~a 149 (149)
T 3k2v_A 100 --------VMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG--DHLLGVVHMHDLLRA 149 (149)
T ss_dssp --------HSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHTCC
T ss_pred --------HcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC--CEEEEEEEHHHhhcC
Confidence 67778899999999999999999999999999994 499999999999863
No 35
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=1.6e-18 Score=144.83 Aligned_cols=123 Identities=20% Similarity=0.347 Sum_probs=106.4
Q ss_pred cccccCCC---CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANGR---PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~~---~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++.+..+.... .+.++.+
T Consensus 25 ~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~---~~~~v~~---- 97 (165)
T 3fhm_A 25 FVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAAS---LQQSVSV---- 97 (165)
T ss_dssp BHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGG---GTSBGGG----
T ss_pred CHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCcc---ccCCHHH----
Confidence 56677874 6899999999999999999999999999999999999999999998665432111 1355666
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.++++++++++++.+|++.|.+++++++||+| + |+++|+||..||++++..
T Consensus 98 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 98 ---------AMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE-N-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp ---------TSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHTTC
T ss_pred ---------HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 7778899999999999999999999999999999 5 999999999999998754
No 36
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.77 E-value=3.1e-18 Score=142.19 Aligned_cols=122 Identities=17% Similarity=0.358 Sum_probs=104.7
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 296 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 296 (358)
+++++|.++ +++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.....+.. ..+.++.+
T Consensus 18 ~v~~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~------- 85 (159)
T 3fv6_A 18 QVKDFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQE----LTSVPVHI------- 85 (159)
T ss_dssp BGGGSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSC----TTTCBGGG-------
T ss_pred CHHHHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCc----ccCcCHHH-------
Confidence 566778874 599999999999999999999999999989999999999999986533211 11456666
Q ss_pred CCCCcccCCc--cceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCC---eEEEEEehHHHHHHhhc
Q 018309 297 ANPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSK---RVEGIISLSDVFRFLLG 357 (358)
Q Consensus 297 ~~~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~---~liGvis~~Dil~~~~~ 357 (358)
+|.+ +++++++++++.+|++.|.+++++++||+|+ +| +++|+||..||++++..
T Consensus 86 ------~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 86 ------IMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD-TDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp ------TSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-CSSSEEEEEEEEHHHHHHHHHH
T ss_pred ------HHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCcceeEEEEEEHHHHHHHHHH
Confidence 6766 8899999999999999999999999999994 67 99999999999999863
No 37
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.77 E-value=8.7e-19 Score=140.83 Aligned_cols=122 Identities=16% Similarity=0.257 Sum_probs=104.7
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH-HHhcccccccccccccHHHHHhcCC
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA-LAKDKAYAQIHLDEMNIHQALQLGQ 295 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~-~~~~~~~~~l~~~~~~v~~~l~~~~ 295 (358)
+++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|++|.+|++. .+..+.. ..+.++.+
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~----~~~~~v~~------ 78 (133)
T 1y5h_A 9 TARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLD----PNTATAGE------ 78 (133)
T ss_dssp CHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCC----TTTSBHHH------
T ss_pred CHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCC----ccccCHHH------
Confidence 456678888999999999999999999999999999998899999999999984 4433211 11467777
Q ss_pred CCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 296 DANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 296 ~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.+++.+++||+| + |+++|+||..||++++.+
T Consensus 79 -------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd-~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 79 -------LARDSIYYVDANASIQEMLNVMEEHQVRRVPVIS-E-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp -------HHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHTCC-
T ss_pred -------HhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHh
Confidence 5566889999999999999999999999999999 4 899999999999998764
No 38
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.77 E-value=1.2e-18 Score=144.02 Aligned_cols=125 Identities=18% Similarity=0.259 Sum_probs=103.2
Q ss_pred cccccCC--CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 018309 217 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 294 (358)
Q Consensus 217 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~ 294 (358)
+++++|. ++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.....+.+....+.+.++.+
T Consensus 16 ~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~----- 90 (156)
T 3ctu_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH----- 90 (156)
T ss_dssp TGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG-----
T ss_pred HHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHH-----
Confidence 4556677 578999999999999999999999999999999999999999999987654322111111344555
Q ss_pred CCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 295 QDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 295 ~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.++++++++++++.+|++.|.+++ ++||+| ++|+++|+||..||++++..
T Consensus 91 --------~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd-~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 91 --------MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD-AEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp --------GCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC-TTSBEEEEEETTHHHHHHHH
T ss_pred --------hccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc-CCCeEEEEEEHHHHHHHHHH
Confidence 77778999999999999999999986 799999 57999999999999998753
No 39
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.76 E-value=2.8e-18 Score=140.82 Aligned_cols=125 Identities=21% Similarity=0.213 Sum_probs=103.8
Q ss_pred cccccCC--CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccc-cccccccccHHHHHhc
Q 018309 217 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAY-AQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~-~~l~~~~~~v~~~l~~ 293 (358)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++..+..... ........++.+
T Consensus 16 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 91 (150)
T 3lqn_A 16 FVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQ---- 91 (150)
T ss_dssp BHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG----
T ss_pred ChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH----
Confidence 4566687 458999999999999999999999999999999999999999999987643211 000111344554
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.++++ +||+| ++|+++|+||..||++++..
T Consensus 92 ---------~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd-~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 92 ---------VMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN-EDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp ---------TCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC-TTCBEEEEEEHHHHHHHHHH
T ss_pred ---------HhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC-CCCcEEEEEEHHHHHHHHHH
Confidence 777889999999999999999999987 99999 57999999999999998853
No 40
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.75 E-value=5.8e-18 Score=136.40 Aligned_cols=122 Identities=11% Similarity=0.243 Sum_probs=103.7
Q ss_pred cccccCC---CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANG---RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~---~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|. +++.++.+++++.+|++.|.+++.+++||+| +|+++|++|.+|++........ ...+.++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~---- 78 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDK---PVKDTQVKE---- 78 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSS---CGGGSBGGG----
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCC---CcccCCHHH----
Confidence 4566687 7899999999999999999999999999998 8999999999999863322211 111345565
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.+++++++||+| + |+++|+||..|+++++.+
T Consensus 79 ---------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 79 ---------IMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp ---------TSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHC
T ss_pred ---------hccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHHHh
Confidence 7778899999999999999999999999999999 3 899999999999998864
No 41
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.75 E-value=2.2e-18 Score=145.65 Aligned_cols=127 Identities=24% Similarity=0.347 Sum_probs=102.9
Q ss_pred cccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccc--------cc--c----
Q 018309 217 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAY--------AQ--I---- 280 (358)
Q Consensus 217 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~--------~~--l---- 280 (358)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++........ .. .
T Consensus 5 ~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (180)
T 3sl7_A 5 TVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKT 84 (180)
T ss_dssp BHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCS
T ss_pred eHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhh
Confidence 45667877 78999999999999999999999999999999999999999999852210000 00 0
Q ss_pred ---------ccccccHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHH
Q 018309 281 ---------HLDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDV 351 (358)
Q Consensus 281 ---------~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Di 351 (358)
...+.++.+ +|.++++++++++++.+|++.|.+++++++||+| ++|+++|+||..||
T Consensus 85 ~~~~~~~~~~~~~~~v~~-------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~di 150 (180)
T 3sl7_A 85 FNELQKLISKTYGKVVGD-------------LMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD-ADGKLIGILTRGNV 150 (180)
T ss_dssp HHHHHHHHHTTTTCBHHH-------------HSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC-TTCBEEEEEEHHHH
T ss_pred hHHHHHHHhccccccHHH-------------HhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC-CCCeEEEEEEHHHH
Confidence 001223333 7778899999999999999999999999999999 57999999999999
Q ss_pred HHHhhc
Q 018309 352 FRFLLG 357 (358)
Q Consensus 352 l~~~~~ 357 (358)
++++..
T Consensus 151 l~~~~~ 156 (180)
T 3sl7_A 151 VRAALQ 156 (180)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999854
No 42
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.75 E-value=7.2e-18 Score=143.49 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=106.0
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 296 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 296 (358)
+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++..+...... ....++.+
T Consensus 10 ~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~---~~~~~v~~------- 79 (184)
T 1pvm_A 10 RVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKK---PDEVPIRL------- 79 (184)
T ss_dssp BGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCC---GGGSBGGG-------
T ss_pred CHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccC---cccCCHHH-------
Confidence 56677988999999999999999999999999999999889999999999999865421110 11345555
Q ss_pred CCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 297 ANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 297 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.+++.++++++++.+|++.|.+++.+++||+| ++|+++|+||..||++++.
T Consensus 80 ------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 80 ------VMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVD-DPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp ------TSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEEC-TTCCEEEEEEHHHHTTTSC
T ss_pred ------HhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 7778899999999999999999999999999999 4799999999999998764
No 43
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.75 E-value=9.3e-18 Score=139.61 Aligned_cols=131 Identities=14% Similarity=0.239 Sum_probs=104.5
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcC--CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD--NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 294 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~--~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~ 294 (358)
+++++|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|++|..|+......+..........++.+++...
T Consensus 14 ~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~ 93 (164)
T 2pfi_A 14 RVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARG 93 (164)
T ss_dssp BHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHTT
T ss_pred CHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhccc
Confidence 566779889999999999999999999999999999996 799999999999998664332111111235677755321
Q ss_pred CCCCCCcccCCcc-ceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 295 QDANPSLGFNGQR-CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 295 ~~~~~~~~~~~~~-~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
....+ +.++++++++.+|++.|.+++++++||+|+ |+++|+||..||++++.+
T Consensus 94 --------~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~--g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 94 --------CPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSR--GRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp --------CCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHHHH
T ss_pred --------ccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEEC--CEEEEEEEHHHHHHHHHh
Confidence 11112 789999999999999999999999999993 899999999999998753
No 44
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.75 E-value=1.6e-17 Score=137.59 Aligned_cols=125 Identities=9% Similarity=0.138 Sum_probs=104.9
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCE-EEEEcCCCcEEEEEeHHHHHHHHhcc------c---cc--cccccc
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSS-IPIVDDNDSLLDIYSRSDITALAKDK------A---YA--QIHLDE 284 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~-vpVvd~~g~liGiis~~dl~~~~~~~------~---~~--~l~~~~ 284 (358)
+++++|.++++++.+++++.+|++.|.++++++ +||+|++ +++|++|.+|++...... . +. .....+
T Consensus 17 ~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (157)
T 1o50_A 17 DVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLIA 95 (157)
T ss_dssp HHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCSS
T ss_pred cHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHcC
Confidence 567789999999999999999999999999999 9999987 999999999999864311 0 00 001123
Q ss_pred ccHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 285 MNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 285 ~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
.++.+ +|.+ ++++++++++.+|++.|.+++++++||+| ++|+++|+||..||++++.+
T Consensus 96 ~~v~~-------------im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 96 KNASE-------------IMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD-EKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp CBHHH-------------HCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC-TTSCEEEEEEHHHHHHHHHH
T ss_pred CcHHH-------------HcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc-CCCEEEEEEEHHHHHHHHHH
Confidence 45555 7777 89999999999999999999999999999 47999999999999998864
No 45
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.75 E-value=1.1e-17 Score=138.31 Aligned_cols=125 Identities=18% Similarity=0.199 Sum_probs=103.8
Q ss_pred cccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhccc-ccccccccccHHHHHhc
Q 018309 217 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA-YAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~-~~~l~~~~~~v~~~l~~ 293 (358)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++.....+. +....+...++.+
T Consensus 12 ~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 87 (157)
T 2emq_A 12 TVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEE---- 87 (157)
T ss_dssp BSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGG----
T ss_pred cHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHH----
Confidence 46667875 7889999999999999999999999999998899999999999998654321 1000111344444
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.++++ +||+| ++|+++|+||..||++++..
T Consensus 88 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd-~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 88 ---------VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN-DDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp ---------TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC-SSSSEEEEEEHHHHHHHHHH
T ss_pred ---------HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc-CCCeEEEEEEHHHHHHHHHH
Confidence 777889999999999999999999988 99999 47999999999999998753
No 46
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.74 E-value=9.7e-18 Score=139.09 Aligned_cols=124 Identities=19% Similarity=0.217 Sum_probs=104.7
Q ss_pred cccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhccc-ccccccccccHHHHHhc
Q 018309 217 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA-YAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~-~~~l~~~~~~v~~~l~~ 293 (358)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|++|..|++....... +........++.+
T Consensus 15 ~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~---- 90 (159)
T 1yav_A 15 TVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEE---- 90 (159)
T ss_dssp BHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHH----
T ss_pred hHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHH----
Confidence 45666877 7899999999999999999999999999999999999999999998764321 1111122456777
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.+++.++++++++.+|++.|.++++ +||+| ++|+++|+||..||++++.
T Consensus 91 ---------~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd-~~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 91 ---------VMLTDIPRLHINDPIMKGFGMVINNGF--VCVEN-DEQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp ---------HSBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ---------hcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe-CCCeEEEEEEHHHHHHHHH
Confidence 677789999999999999999999987 99999 4799999999999999875
No 47
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.73 E-value=1.6e-17 Score=137.45 Aligned_cols=122 Identities=14% Similarity=0.280 Sum_probs=104.4
Q ss_pred cccccCC------CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHH
Q 018309 217 RIGEANG------RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 290 (358)
Q Consensus 217 ~v~~~m~------~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~ 290 (358)
+++++|. +++.++.+++++.+|++.|.+++++++||+| +|+++|++|.+|++..+...... ..+.++.+
T Consensus 8 ~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~---~~~~~v~~- 82 (157)
T 4fry_A 8 TVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERS---SKATRVEE- 82 (157)
T ss_dssp BHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCC---SSSCBHHH-
T ss_pred HHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCC---ccccCHHH-
Confidence 4566676 5579999999999999999999999999965 89999999999999866443221 12567787
Q ss_pred HhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 291 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 291 l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
+|.+++.++++++++.+|++.|.+++++++||+| + |+++|+||..||++++..
T Consensus 83 ------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 83 ------------IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp ------------HSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHT
T ss_pred ------------HcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 6777899999999999999999999999999999 3 999999999999999864
No 48
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.73 E-value=3e-17 Score=142.14 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=104.0
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhC---CCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQA---DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~---~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|+++++++.+++++.+|++.|.++ +++.+||+|++|+++|++|.+|++... .+.++.+
T Consensus 55 ~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~---- 120 (205)
T 3kxr_A 55 EIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE----------PHEPLIS---- 120 (205)
T ss_dssp CGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC----------TTSBGGG----
T ss_pred hHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC----------CcchHHH----
Confidence 57778999999999999999999999987 899999999999999999999987420 1345666
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.++++++++++++.+|++.|.+++++++|||| ++|+++|+||..|+++.+.
T Consensus 121 ---------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD-~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 121 ---------LLSEDSRALTANTTLLDAAEAIEHSREIELPVID-DAGELIGRVTLRAATALVR 173 (205)
T ss_dssp ---------GCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ---------HhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 8888999999999999999999999999999999 5899999999999999874
No 49
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.72 E-value=2.7e-17 Score=138.58 Aligned_cols=118 Identities=15% Similarity=0.189 Sum_probs=100.9
Q ss_pred cccccCC--CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCC-CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANG--RPFAMLRPTASLGSALALLVQADVSSIPIVDDN-DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~-g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|+ ++++++.+++++.+|++.|.+++++++||+|++ |+++|++|.+|++.....+. ..++.
T Consensus 37 ~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~-------~~~v~----- 104 (173)
T 3ocm_A 37 SIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-------RVRRN----- 104 (173)
T ss_dssp CSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------SCCGG-----
T ss_pred CHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC-------cchhH-----
Confidence 4566685 468899999999999999999999999999986 89999999999998654321 12222
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
|.++++++++++++.+|++.|.+++++++||+| ++|+++|+||..||++++++
T Consensus 105 ----------~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd-e~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 105 ----------RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD-EFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp ----------GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC-TTCCEEEEECHHHHHHHHHC
T ss_pred ----------hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe-CCCCEEEEEeHHHHHHHHhC
Confidence 224688999999999999999999999999999 57999999999999999875
No 50
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.72 E-value=1.1e-17 Score=138.58 Aligned_cols=114 Identities=11% Similarity=0.288 Sum_probs=99.9
Q ss_pred cccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCC-cEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 217 RIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDND-SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 217 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g-~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|+++ +++|++|.+|++.....+ .+.++.+
T Consensus 39 ~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~~---- 107 (156)
T 3oi8_A 39 EVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------EQFHLKS---- 107 (156)
T ss_dssp BGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-------GGCCHHH----
T ss_pred CHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-------CcccHHH----
Confidence 56777876 688999999999999999999999999999874 999999999998854332 1467777
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHH
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVF 352 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil 352 (358)
+|. +++++++++++.+|++.|.+++.+++||+| ++|+++|+||+.||+
T Consensus 108 ---------im~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd-~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 108 ---------ILR-PAVFVPEGKSLTALLKEFREQRNHMAIVID-EYGGTSGLVTFEDII 155 (156)
T ss_dssp ---------HCB-CCCEEETTSBHHHHHHHHHHTTCCEEEEEC-TTSSEEEEEEHHHHC
T ss_pred ---------HcC-CCEEECCCCCHHHHHHHHHhcCCeEEEEEC-CCCCEEEEEEHHHhc
Confidence 564 488999999999999999999999999999 579999999999986
No 51
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.72 E-value=4.9e-17 Score=140.78 Aligned_cols=161 Identities=16% Similarity=0.102 Sum_probs=123.1
Q ss_pred eeehHHHHHHHHHhccCCCCCCHHHHhhcchHHHHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHhhC---
Q 018309 79 VLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN--- 155 (358)
Q Consensus 79 ilt~~Di~~~l~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~v~v~~~~sl~~al~~m~~~--- 155 (358)
-++..|.++++..+.. ....+.+..+.-.+...+...+. |..+.+|.+|.++++++++++|+.+|++.|.++
T Consensus 12 ~m~~dd~~dll~~l~~---~~~~~~l~~l~~~e~~~i~~~l~--~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~ 86 (205)
T 3kxr_A 12 QLSPEDLIEWSDYLPE---SFTDRALAQMGERQRQRFELYDQ--YSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELD 86 (205)
T ss_dssp GSCHHHHHHTTTTSCH---HHHHHHHHHSCHHHHHHHHHHHH--SCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCT
T ss_pred cCCHHHHHHHHHhCCH---HHHHHHHHcCCHHHHHHHHHHhC--CCcchHHhhccCceEEECCCCcHHHHHHHHHhhCcc
Confidence 3455666665543311 11112233333334444444444 778888999999999999999999999999987
Q ss_pred CcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccccccccccccccCCCCceEecCCCCH
Q 018309 156 KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASL 235 (358)
Q Consensus 156 ~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l 235 (358)
+++.+||+|+ .| +++|+++.+|++.. ... ..++++|.++++++.+++++
T Consensus 87 ~~~~~~Vvd~---~~---~lvGivt~~dll~~-------------~~~------------~~v~~im~~~~~~v~~~~~l 135 (205)
T 3kxr_A 87 CNDNLFIVDE---AD---KYLGTVRRYDIFKH-------------EPH------------EPLISLLSEDSRALTANTTL 135 (205)
T ss_dssp TCCEEEEECT---TC---BEEEEEEHHHHTTS-------------CTT------------SBGGGGCCSSCCCEETTSCH
T ss_pred CeeEEEEEcC---CC---eEEEEEEHHHHHhC-------------CCc------------chHHHHhcCCCeEECCCCCH
Confidence 8999999975 45 89999999998651 011 23556698899999999999
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcc
Q 018309 236 GSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 275 (358)
Q Consensus 236 ~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~ 275 (358)
.+|++.|.+++++.+||+|++|+++|+||..|++..+.+.
T Consensus 136 ~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 136 LDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREH 175 (205)
T ss_dssp HHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 9999999999999999999999999999999999977643
No 52
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.71 E-value=7.6e-17 Score=143.46 Aligned_cols=199 Identities=11% Similarity=0.071 Sum_probs=130.8
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCC------CCc---
Q 018309 129 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSS------SSL--- 199 (358)
Q Consensus 129 ~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~------~~~--- 199 (358)
+.+|.++++++.+++++.+|+++|.+++++++||+|+ +| +++|++|..|+++++........ ...
T Consensus 10 ~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~ 83 (245)
T 3l2b_A 10 EDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG---NN---HLLGMLSTSNITATYMDIWDSNILAKSATSLDNIL 83 (245)
T ss_dssp GGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHH
T ss_pred HHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHH
Confidence 3478889999999999999999999999999999975 45 89999999999998754321100 000
Q ss_pred -----c------cccccccccccccc-cccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCC----------
Q 018309 200 -----P------ILQQPVSSIQLGTW-VPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND---------- 257 (358)
Q Consensus 200 -----~------~~~~~v~~l~i~~~-~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g---------- 257 (358)
. ........+.++.. ...+.+.+....+.+..+ ..++.+.+.+.+++++++.+...
T Consensus 84 ~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 84 DTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence 0 00000011111110 122334444444445444 48889999999999998875321
Q ss_pred --cEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCC-ccceEEcCCCCHHHHHHHHhcCCCCEEEE
Q 018309 258 --SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNG-QRCQMCLRSDPLHKVMERLANPGVRRLVI 334 (358)
Q Consensus 258 --~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~-~~~~~v~~~~~l~~a~~~m~~~~~~~l~V 334 (358)
.+-.+.|..|.......- ....++.+ +|. +++.++++++++.+|++.|.+++++++||
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~------~~~~~v~~-------------im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pV 222 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLI------VQSLPVDY-------------VMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPV 222 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHG------GGGSBHHH-------------HSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEE
T ss_pred HcCCeEEEeCCChHHHHHHH------hcCCceee-------------EecCCccEEECCCCcHHHHHHHHHhcCCceEEE
Confidence 223333333333221110 01244555 787 88999999999999999999999999999
Q ss_pred EeCCCCeEEEEEehHHHHHHh
Q 018309 335 VEAGSKRVEGIISLSDVFRFL 355 (358)
Q Consensus 335 vd~~~~~liGvis~~Dil~~~ 355 (358)
+| ++|+++|+||..|++++.
T Consensus 223 vd-~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 223 ID-ENNKVVGSIARFHLISTH 242 (245)
T ss_dssp EC-TTCBEEEEEECC------
T ss_pred Ec-CCCeEEEEEEHHHhhchh
Confidence 99 479999999999999864
No 53
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.71 E-value=2.6e-17 Score=143.47 Aligned_cols=120 Identities=14% Similarity=0.200 Sum_probs=105.2
Q ss_pred cccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHh
Q 018309 213 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQ 292 (358)
Q Consensus 213 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~ 292 (358)
.|..+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|+..... +.++.+
T Consensus 10 ~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~----------~~~v~~--- 76 (213)
T 1vr9_A 10 HHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL----------DSSVFN--- 76 (213)
T ss_dssp ---CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT----------TSBSGG---
T ss_pred ccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC----------CCcHHH---
Confidence 4556788889999999999999999999999999999999998899999999999876321 234555
Q ss_pred cCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 293 LGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.++++++++++++.+|++.|.+++++++||+| ++|+++|+||..|+++++.
T Consensus 77 ----------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGiit~~Dil~~~~ 129 (213)
T 1vr9_A 77 ----------KVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVD-EEMRLKGAVSLHDFLEALI 129 (213)
T ss_dssp ----------GCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ----------HccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEc-CCCEEEEEEEHHHHHHHHH
Confidence 7778899999999999999999999999999999 4799999999999999864
No 54
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.71 E-value=3e-17 Score=137.82 Aligned_cols=136 Identities=20% Similarity=0.295 Sum_probs=102.3
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCC---cccccccc
Q 018309 130 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSS---LPILQQPV 206 (358)
Q Consensus 130 ~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~---~~~~~~~v 206 (358)
++|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|.+|+++.+.......... ........
T Consensus 22 diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~g---~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~ 95 (170)
T 4esy_A 22 DILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ---NG---HLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEV 95 (170)
T ss_dssp GGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT---TS---CEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHH
T ss_pred HhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC---Cc---cEEEEEEHHHHHHHHhhccccchhhhhhhccchhhH
Confidence 479999999999999999999999999999999975 56 8999999999987442211000000 00000000
Q ss_pred cccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 207 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 207 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
..+.-......++++|+++++++++++++.+|+++|.+++++++||+| +|+++|+||++||++.+
T Consensus 96 ~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 96 EHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp HHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTS
T ss_pred HhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 000000111356788999999999999999999999999999999998 69999999999999854
No 55
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.70 E-value=6.2e-17 Score=137.37 Aligned_cols=125 Identities=14% Similarity=0.234 Sum_probs=102.6
Q ss_pred cccccCCCC----ceEe--cCCCCHHHHHHHHHhCCCCEEEEE--cCCCcEEEEEeHHHHHHHHhcccccccc-------
Q 018309 217 RIGEANGRP----FAML--RPTASLGSALALLVQADVSSIPIV--DDNDSLLDIYSRSDITALAKDKAYAQIH------- 281 (358)
Q Consensus 217 ~v~~~m~~~----~~~v--~~~~~l~~a~~~m~~~~~~~vpVv--d~~g~liGiis~~dl~~~~~~~~~~~l~------- 281 (358)
+++++|.+. ++++ .+++++.+|++.|.+++++++||+ |++|+++|+||..|++..+.........
T Consensus 12 ~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~ 91 (185)
T 2j9l_A 12 LAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSII 91 (185)
T ss_dssp BHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEE
T ss_pred cHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcccccee
Confidence 566678776 7888 999999999999999999999999 7889999999999999865432100000
Q ss_pred -------------cccccHHHHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEeh
Q 018309 282 -------------LDEMNIHQALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISL 348 (358)
Q Consensus 282 -------------~~~~~v~~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~ 348 (358)
....++.+ +|.++++++++++++.+|++.|.+++++++||+| +|+++|+||.
T Consensus 92 ~~~~~~~~~~~~~~~~~~v~~-------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~g~~vGiit~ 156 (185)
T 2j9l_A 92 YFTEHSPPLPPYTPPTLKLRN-------------ILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH--NGRLLGIITK 156 (185)
T ss_dssp ECSSSCCCCCTTCCCCEECGG-------------GEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEH
T ss_pred ecccCCcccccccccCccHHH-------------hhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE--CCEEEEEEEH
Confidence 00122222 7778899999999999999999999999999999 3999999999
Q ss_pred HHHHHHhh
Q 018309 349 SDVFRFLL 356 (358)
Q Consensus 349 ~Dil~~~~ 356 (358)
.||++++.
T Consensus 157 ~dll~~l~ 164 (185)
T 2j9l_A 157 KDVLKHIA 164 (185)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 56
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.70 E-value=6.4e-17 Score=133.93 Aligned_cols=118 Identities=18% Similarity=0.228 Sum_probs=98.2
Q ss_pred CCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccccc
Q 018309 133 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 212 (358)
Q Consensus 133 ~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~ 212 (358)
..+++++.+++|+.+|+++|.+++++++||+|+ +| +++|++|.+|+++++....... .....
T Consensus 24 ~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~---~~---~lvGiit~~Di~~~~~~~~~~~---~~~~~--------- 85 (156)
T 3k6e_A 24 AKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMAD--------- 85 (156)
T ss_dssp TTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTT---------
T ss_pred hhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC---CC---cEEEEEEecchhhhhhhccccc---ccccc---------
Confidence 467899999999999999999999999999964 45 8999999999999876543210 00111
Q ss_pred cccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 213 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 213 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
..++++|.++++++++++++.+|++.|.++++ +||+|++|+++|+||.+|+++.+.
T Consensus 86 ---~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 86 ---TDIVHMTKTDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp ---SBGGGTCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHH
T ss_pred ---cCHHHhhcCCceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHH
Confidence 24566699999999999999999999998764 999999999999999999998764
No 57
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.69 E-value=1.1e-16 Score=139.45 Aligned_cols=156 Identities=15% Similarity=0.175 Sum_probs=100.3
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 129 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 129 ~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+.+|.++++++.+++++.+|+++|.+++.+++||+|+ +| +++|++|..|+.+++ ..
T Consensus 16 ~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~l~Givt~~dl~~~~-------------~~----- 71 (213)
T 1vr9_A 16 KKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDR---EG---HFRGVVNKEDLLDLD-------------LD----- 71 (213)
T ss_dssp GGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECT---TS---BEEEEEEGGGGTTSC-------------TT-----
T ss_pred HHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---EEEEEEEHHHHHhhc-------------CC-----
Confidence 3468889999999999999999999999999999974 35 899999999987621 11
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHH
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIH 288 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~ 288 (358)
..++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|++..+.... ...
T Consensus 72 -------~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~---------~~~ 135 (213)
T 1vr9_A 72 -------SSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL---------AMD 135 (213)
T ss_dssp -------SBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC---------C--
T ss_pred -------CcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh---------cCC
Confidence 2356668888999999999999999999999999999998899999999999998654221 111
Q ss_pred HHHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEe
Q 018309 289 QALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVE 336 (358)
Q Consensus 289 ~~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 336 (358)
+... . + .+.+.....++.+|.+.|.+++++.++|++
T Consensus 136 ~~~~-------~--l---~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~ 171 (213)
T 1vr9_A 136 VPGI-------R--F---SVLLEDKPGELRKVVDALALSNINILSVIT 171 (213)
T ss_dssp ------------------------------------------------
T ss_pred CCcE-------E--E---EEEeCCCCccHHHHHHHHHHCCCcEEEEEE
Confidence 1000 0 0 011223344599999999999999999886
No 58
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.69 E-value=2.1e-16 Score=129.41 Aligned_cols=117 Identities=14% Similarity=0.139 Sum_probs=100.4
Q ss_pred CCCCCC--CceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccc
Q 018309 129 GRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 206 (358)
Q Consensus 129 ~~~~~~--~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v 206 (358)
+.+|.+ +++++++++++.+|++.|.+++++++||+|+ +.| +++|++|.+|+++++.... ..
T Consensus 26 ~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~-- 88 (148)
T 3lv9_A 26 REIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK--NKD---DILGFVHIRDLYNQKINEN----------KI-- 88 (148)
T ss_dssp GGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------CC--
T ss_pred HHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhcCC----------Cc--
Confidence 346776 8999999999999999999999999999964 225 7999999999998765331 12
Q ss_pred cccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 207 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 207 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
.++++| +++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|++..+.
T Consensus 89 ----------~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 89 ----------ELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp ----------CGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred ----------cHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 345558 78899999999999999999999999999999999999999999998654
No 59
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.69 E-value=2.8e-16 Score=132.18 Aligned_cols=120 Identities=10% Similarity=0.057 Sum_probs=102.2
Q ss_pred CCCCCCC--CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccc
Q 018309 127 GNGRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ 204 (358)
Q Consensus 127 ~~~~~~~--~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~ 204 (358)
.++.+|. .+++++++++++.+|++.|.+++++++||+++ +.| +++|++|..|+++++.... .
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~- 106 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN--NVD---DMVGIISAKQLLSESIAGE----------R- 106 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS--STT---SEEEEEEHHHHHHHHHTTC----------C-
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---eEEEEEEHHHHHHHHhhcC----------c-
Confidence 3456788 78899999999999999999999999999964 215 7999999999998654210 1
Q ss_pred cccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 205 PVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 205 ~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
..++++| ++++++.+++++.+|++.|.+++++.+||+|++|+++|+||..|++..+..
T Consensus 107 -----------~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 107 -----------LELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp -----------CCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred -----------ccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 2355568 789999999999999999999999999999999999999999999986653
No 60
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.69 E-value=3.8e-16 Score=138.86 Aligned_cols=138 Identities=17% Similarity=0.292 Sum_probs=105.0
Q ss_pred cccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCC--CcEEEEEeHHHHHHHHhcccc--cc-------------
Q 018309 217 RIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN--DSLLDIYSRSDITALAKDKAY--AQ------------- 279 (358)
Q Consensus 217 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~--g~liGiis~~dl~~~~~~~~~--~~------------- 279 (358)
.++++|+++++++.+++++.+|.++|.+++++++||||++ |+++|+||++||+.++..... ..
T Consensus 14 ~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~~ 93 (250)
T 2d4z_A 14 QVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEGR 93 (250)
T ss_dssp BTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC--
T ss_pred ChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccccccc
Confidence 6788899999999999999999999999999999999964 689999999999986542210 00
Q ss_pred ---------------ccccc---------------------------------------------------------ccH
Q 018309 280 ---------------IHLDE---------------------------------------------------------MNI 287 (358)
Q Consensus 280 ---------------l~~~~---------------------------------------------------------~~v 287 (358)
..+.+ .+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 173 (250)
T 2d4z_A 94 NGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLTL 173 (250)
T ss_dssp -------------------------------------------------------------------------CCSCCBH
T ss_pred ccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccCh
Confidence 00000 000
Q ss_pred HHH--HhcCCCCCCCc----ccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhhc
Q 018309 288 HQA--LQLGQDANPSL----GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 288 ~~~--l~~~~~~~~~~----~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~~ 357 (358)
.+. +... ....++ .+|...++++.++++|.+|..+|...|++++||++ .|+++||||+.||++++.+
T Consensus 174 ~~~~~~~~~-~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~--~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 174 EEIYRWEQR-EKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS--MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHH-HTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred hhhhhHHHH-hcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE--CCEEEEEEEHHHHHHHHHH
Confidence 000 0000 011122 15888999999999999999999999999999999 3999999999999999865
No 61
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.69 E-value=2.2e-16 Score=126.32 Aligned_cols=118 Identities=11% Similarity=0.122 Sum_probs=98.2
Q ss_pred CCCCCC--CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccc
Q 018309 128 NGRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 205 (358)
Q Consensus 128 ~~~~~~--~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~ 205 (358)
++.+|. .+++++++++++.+|++.|.+++++++||+|+ +.| +++|++|.+|+++++.... ...
T Consensus 8 v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~~~---------~~~- 72 (130)
T 3i8n_A 8 VTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE--QKD---NIIGFVHRLELFKMQQSGS---------GQK- 72 (130)
T ss_dssp CTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS--STT---CEEEECCHHHHHHHHHTTT---------TTS-
T ss_pred HhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---cEEEEEEHHHHHHHHhcCC---------CcC-
Confidence 345777 55778999999999999999999999999964 225 7999999999998664321 112
Q ss_pred ccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 206 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 206 v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
.++++|. ++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|+++.+
T Consensus 73 -----------~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 73 -----------QLGAVMR-PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHL 127 (130)
T ss_dssp -----------BHHHHSE-ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred -----------CHHHHhc-CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHH
Confidence 3444573 578999999999999999999999999999999999999999999865
No 62
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.69 E-value=1.6e-16 Score=125.45 Aligned_cols=114 Identities=20% Similarity=0.331 Sum_probs=99.9
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
+|.++++++++++++.+|++.|.+++.+.+||+|+ +| +++|+++..|+++++.... .
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~-----------~------ 62 (122)
T 3kpb_A 6 ILSKPPITAHSNISIMEAAKILIKHNINHLPIVDE---HG---KLVGIITSWDIAKALAQNK-----------K------ 62 (122)
T ss_dssp HCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECT---TS---BEEEEECHHHHHHHHHTTC-----------C------
T ss_pred hhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---CEEEEEEHHHHHHHHHhcc-----------c------
Confidence 57788999999999999999999999999999974 45 8999999999998664311 1
Q ss_pred cccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 211 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 211 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
.++++|.+++.++.+++++.++++.|.+++.+.+||+|++|+++|++|..|+++.+.
T Consensus 63 ------~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 63 ------TIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp ------BGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred ------CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 344558788999999999999999999999999999999899999999999998764
No 63
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.66 E-value=2.9e-16 Score=143.03 Aligned_cols=117 Identities=15% Similarity=0.244 Sum_probs=105.2
Q ss_pred ccccccCCCCceEecCCCCHHHHHHHHHhC-----CCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHH
Q 018309 216 PRIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 290 (358)
Q Consensus 216 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~ 290 (358)
.+++++|+++++++.+++++.+|++.|.++ +++++||+|++|+++|+||.+|++... .+.++.+
T Consensus 137 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~----------~~~~v~~- 205 (286)
T 2oux_A 137 ETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND----------DDTLIAD- 205 (286)
T ss_dssp TBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC----------TTSBHHH-
T ss_pred HHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC----------CCCcHHH-
Confidence 467788999999999999999999999987 889999999999999999999997631 1467777
Q ss_pred HhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 291 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 291 l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.++++++++++++.+|++.|.+++.+++|||| ++|+++|+||..|+++.+.
T Consensus 206 ------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 206 ------------ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD-YDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp ------------HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTCBEEEEEEHHHHHHHHH
T ss_pred ------------HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHHHHH
Confidence 7777899999999999999999999999999999 5899999999999999874
No 64
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.65 E-value=1e-15 Score=122.65 Aligned_cols=119 Identities=22% Similarity=0.323 Sum_probs=101.4
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 129 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 129 ~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+.+|.++++++++++++.+|++.|.+++.+.+||+| +| +++|+++..|+.+++..... ..
T Consensus 7 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~--------~~----- 66 (133)
T 2ef7_A 7 KEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD----GN---KPVGIITERDIVKAIGKGKS--------LE----- 66 (133)
T ss_dssp GGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHTTCC--------TT-----
T ss_pred HHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEcHHHHHHHHhcCCC--------cc-----
Confidence 346888899999999999999999999999999996 25 89999999999987653211 11
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
..++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|++..+.+
T Consensus 67 -------~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 67 -------TKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp -------CBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred -------cCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 23455577788999999999999999999999999999989999999999999986653
No 65
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.65 E-value=6.5e-16 Score=122.34 Aligned_cols=117 Identities=17% Similarity=0.217 Sum_probs=99.2
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
+|.++++++++++++.+|++.|.+++.+.+||+| +| +++|+++.+|+++++...... ...
T Consensus 6 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~G~it~~dl~~~~~~~~~~-------~~~------ 65 (125)
T 1pbj_A 6 VMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK----EG---VRVGIVTTWDVLEAIAEGDDL-------AEV------ 65 (125)
T ss_dssp HCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE----TT---EEEEEEEHHHHHHHHHHTCCT-------TTS------
T ss_pred hcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe----CC---eeEEEEeHHHHHHHHhcCCcc-------ccc------
Confidence 4677899999999999999999999999999996 25 899999999999876543210 122
Q ss_pred cccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 211 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 211 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
.++++|.+++.++.+++++.++++.|.+++.+++||+|+ |+++|++|.+|+++.+.+
T Consensus 66 ------~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 66 ------KVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp ------BHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred ------CHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 345558788999999999999999999999999999998 999999999999987653
No 66
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.65 E-value=6.3e-16 Score=140.23 Aligned_cols=117 Identities=18% Similarity=0.269 Sum_probs=103.2
Q ss_pred ccccccCCCCceEecCCCCHHHHHHHHHhC-----CCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHH
Q 018309 216 PRIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 290 (358)
Q Consensus 216 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~ 290 (358)
.+++++|+++++++.+++++.+|++.|.++ +++++||+|++|+++|++|.+|++... .+.++.+
T Consensus 135 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~- 203 (278)
T 2yvy_A 135 DEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAE- 203 (278)
T ss_dssp TBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC----------TTCBSTT-
T ss_pred chHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC----------CCCcHHH-
Confidence 356778999999999999999999999987 799999999999999999999998621 1344555
Q ss_pred HhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 291 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 291 l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.++++++++++++.+|++.|.+++.+++|||| ++|+++|+||..|+++.+.
T Consensus 204 ------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 204 ------------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp ------------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHC-
T ss_pred ------------HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe-CCCeEEEEEEHHHHHHHHH
Confidence 7878899999999999999999999999999999 5799999999999999874
No 67
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.65 E-value=3.3e-16 Score=124.93 Aligned_cols=117 Identities=18% Similarity=0.171 Sum_probs=99.8
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccc
Q 018309 130 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 209 (358)
Q Consensus 130 ~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l 209 (358)
.+|.+++.++++++++.+|++.|.+++.+.+||+|+ | +++|++|.+|+.+++.... .
T Consensus 9 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~----~---~~~Givt~~dl~~~~~~~~---------~------- 65 (128)
T 3gby_A 9 YLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG----E---RYLGMVHLSRLLEGRKGWP---------T------- 65 (128)
T ss_dssp GGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHHTTCSSSC---------C-------
T ss_pred HhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC----C---EEEEEEEHHHHHHHHhhCC---------c-------
Confidence 468889999999999999999999999999999963 4 8999999999987322110 0
Q ss_pred ccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 210 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 210 ~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
....++++|.+++.++.+++++.++++.|.+++.+++||+|++|+++|++|.+|+++.+.
T Consensus 66 ----~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 66 ----VKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp ----TTCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred ----ccCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 002355668888999999999999999999999999999999999999999999998764
No 68
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.64 E-value=2e-16 Score=126.00 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=94.8
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 131 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 131 ~~~~--~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+|.+ +++++++++++.+|++.|.+++++++||+++ +.| +++|++|..|+++++.... ..
T Consensus 8 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~---------~~----- 68 (127)
T 3nqr_A 8 IMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISE--DKD---HIEGILMAKDLLPFMRSDA---------EA----- 68 (127)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGSTTC---------CC-----
T ss_pred hcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhccC---------CC-----
Confidence 4553 4889999999999999999999999999964 225 7999999999987432110 11
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
..++++|.+ +.++.+++++.+|++.|.+++++.+||+|++|+++|++|.+|+++.+
T Consensus 69 -------~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 69 -------FSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp -------CCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred -------CCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 234555754 67899999999999999999999999999999999999999999854
No 69
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=1.3e-15 Score=121.97 Aligned_cols=115 Identities=9% Similarity=0.133 Sum_probs=95.4
Q ss_pred CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccccccc
Q 018309 134 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 213 (358)
Q Consensus 134 ~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 213 (358)
.+++++++++++.+|++.|.+++++++||+++ +.| +++|+++.+|+++++..... ....
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~--~~~---~lvGivt~~dl~~~~~~~~~-------~~~~--------- 70 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRD--SLD---DAISMLRVREAYRLMTEKKE-------FTKE--------- 70 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEESS--SGG---GEEEEEEHHHHHHHHTSSSC-------CCHH---------
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcC--CCC---cEEEEEEHHHHHHHHhccCc-------cchh---------
Confidence 46889999999999999999999999999953 234 89999999999986543110 0111
Q ss_pred ccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 214 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 214 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
.+.++| ++++++.+++++.+|++.|.+++++.+||+|++|+++|++|.+|++..+.
T Consensus 71 ---~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 71 ---IMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp ---HHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred ---hHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 244457 56789999999999999999999999999999999999999999998654
No 70
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.64 E-value=1.1e-15 Score=126.75 Aligned_cols=118 Identities=13% Similarity=0.206 Sum_probs=98.7
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccc
Q 018309 130 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 209 (358)
Q Consensus 130 ~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l 209 (358)
.+|.++ +++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++..... ....
T Consensus 21 ~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~-------~~~~----- 81 (159)
T 3fv6_A 21 DFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDR---DA---VLVGVLSRKDLLRASIGQQE-------LTSV----- 81 (159)
T ss_dssp GSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHTSCSC-------TTTC-----
T ss_pred HHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcC---CC---cEEEEEeHHHHHHHhhccCc-------ccCc-----
Confidence 367764 59999999999999999999999999974 45 89999999999986632110 0122
Q ss_pred ccccccccccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCC---cEEEEEeHHHHHHHHh
Q 018309 210 QLGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDND---SLLDIYSRSDITALAK 273 (358)
Q Consensus 210 ~i~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g---~liGiis~~dl~~~~~ 273 (358)
.++++|.+ ++.++.+++++.+|++.|.+++++++||+|++| +++|+||.+|++..+.
T Consensus 82 -------~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 82 -------PVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp -------BGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHH
T ss_pred -------CHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHH
Confidence 34555876 789999999999999999999999999999888 9999999999998665
No 71
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.63 E-value=1.1e-15 Score=123.26 Aligned_cols=118 Identities=21% Similarity=0.387 Sum_probs=99.2
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhH-HHHHHhhcccCCCCcccccccccc
Q 018309 130 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI-LKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 130 ~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di-~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
.+|.++++++.+++++.+|++.|.+++.+.+||+|+ +| +++|+++..|+ .+++.... ...
T Consensus 12 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~--------~~~----- 72 (138)
T 2p9m_A 12 DVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD---EN---KVIGIVTTTDIGYNLIRDKY--------TLE----- 72 (138)
T ss_dssp GTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT---TC---BEEEEEEHHHHHHHHTTTCC--------CSS-----
T ss_pred HhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC---CC---eEEEEEEHHHHHHHHHhhcc--------cCC-----
Confidence 367788999999999999999999999999999974 35 89999999999 87543210 011
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCC-----CCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQAD-----VSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~-----~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
..++++|.+++.++.+++++.++++.|.+++ .+.+||+|++|+++|++|..|+++.+.
T Consensus 73 -------~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 73 -------TTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp -------CBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -------cCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 2355568888999999999999999999999 999999998999999999999998654
No 72
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.63 E-value=2.3e-15 Score=121.45 Aligned_cols=120 Identities=15% Similarity=0.273 Sum_probs=100.1
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 129 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 129 ~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+.+|.++++++++++++.+|++.|.+++.+.+||+|+ +| +++|+++..|+++.+..... ...
T Consensus 10 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~-------~~~----- 71 (138)
T 2yzi_A 10 KVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND---DG---NVVGFFTKSDIIRRVIVPGL-------PYD----- 71 (138)
T ss_dssp GGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTCC-------CTT-----
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHhcCC-------ccc-----
Confidence 3468889999999999999999999999999999974 45 89999999999752221100 011
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
..++++|.+++.++.+++++.+|++.|.+++++++ |+|++|+++|++|..|+++.+.+
T Consensus 72 -------~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 72 -------IPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp -------SBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHC
T ss_pred -------CCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHH
Confidence 24566688889999999999999999999999999 99988999999999999997654
No 73
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.63 E-value=1.6e-15 Score=125.82 Aligned_cols=127 Identities=19% Similarity=0.239 Sum_probs=102.8
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 129 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 129 ~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+.+|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++........ .. ..
T Consensus 8 ~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~~~------~~--~~ 73 (160)
T 2o16_A 8 EDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA---NK---KLLGIVSQRDLLAAQESSLQRSA------QG--DS 73 (160)
T ss_dssp GGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHHHCC---------------
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHHhhcccc------cc--cc
Confidence 3467888999999999999999999999999999974 45 89999999999998765332100 00 00
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
......+.++|.++++++.+++++.+|++.|.+++++.+||+|+ |+++|+||.+|++..+.
T Consensus 74 ---~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 74 ---LAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp -----CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHH
T ss_pred ---hhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 00112456678889999999999999999999999999999997 99999999999998654
No 74
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.63 E-value=2.4e-15 Score=121.96 Aligned_cols=118 Identities=18% Similarity=0.268 Sum_probs=99.1
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccc
Q 018309 130 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 209 (358)
Q Consensus 130 ~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l 209 (358)
.+|.++++++.+++++.+|++.|.+++.+++||+|+ +| ..+++|++|..|+++++..... ..
T Consensus 9 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~-~~~~~Givt~~dl~~~~~~~~~--------~~------ 70 (141)
T 2rih_A 9 ELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR---DN-PKRPVAVVSERDILRAVAQRLD--------LD------ 70 (141)
T ss_dssp GGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET---TE-EEEEEEEEEHHHHHHHHHTTCC--------TT------
T ss_pred HHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC---CC-cceeEEEEEHHHHHHHHhcCCC--------CC------
Confidence 367889999999999999999999999999999975 11 0169999999999987653210 11
Q ss_pred ccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 210 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 210 ~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
..++++|.+++.++.++ ++.+|++.|.+++.+.+||+|++|+++|++|.+|+++..
T Consensus 71 ------~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 71 ------GPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp ------SBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred ------CCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 23555688889999999 999999999999999999999899999999999998743
No 75
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.63 E-value=3.8e-16 Score=127.91 Aligned_cols=133 Identities=17% Similarity=0.247 Sum_probs=100.8
Q ss_pred CCCCC--CceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccc
Q 018309 130 RPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 207 (358)
Q Consensus 130 ~~~~~--~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~ 207 (358)
.+|.+ +++++++++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++...... ..+. ...
T Consensus 9 ~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~G~vt~~dl~~~~~~~~~~-----~~~~-~~~ 76 (152)
T 4gqw_A 9 EFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE---DW---KLVGLVSDYDLLALDSGDSTW-----KTFN-AVQ 76 (152)
T ss_dssp GTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHTTCC----CC-----HHHH-HHH
T ss_pred hccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC---CC---eEEEEEEHHHHHHhhcccCcc-----cchH-HHH
Confidence 36766 7999999999999999999999999999975 45 899999999998743211100 0000 000
Q ss_pred ccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 208 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 208 ~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
..........++++|.++++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.+.+
T Consensus 77 ~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 77 KLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp TC-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HHHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 0000111235667788888999999999999999999999999999999999999999999997653
No 76
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.63 E-value=3.2e-16 Score=126.50 Aligned_cols=117 Identities=9% Similarity=0.089 Sum_probs=96.0
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 131 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 131 ~~~--~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+|. .+++++++++++.+|++.|.+++++++||+++ +.| +++|++|..|+++++.... ...
T Consensus 8 iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~--------~~~----- 69 (136)
T 3lfr_A 8 IMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGE--SHD---DVLGVLLAKDLLPLILKAD--------GDS----- 69 (136)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGGSSS--------GGG-----
T ss_pred ccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHhcc--------CCC-----
Confidence 355 56889999999999999999999999999964 224 7999999999988442100 011
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
..++++|.+ ++++.+++++.+|++.|.+++++.+||+|++|+++|++|.+|++..+.
T Consensus 70 -------~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 70 -------DDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp -------CCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred -------cCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 234556765 889999999999999999999999999999999999999999998543
No 77
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.63 E-value=1.5e-15 Score=125.00 Aligned_cols=116 Identities=11% Similarity=0.126 Sum_probs=99.1
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHhhCCcceEEEE-ecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccc
Q 018309 131 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPII-HSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 207 (358)
Q Consensus 131 ~~~~--~~v~v~~~~sl~~al~~m~~~~~~~lpV~-d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~ 207 (358)
+|.+ +++++++++++.+|++.|.+++++++||+ ++ +.| +++|++|..|+++++.... .
T Consensus 25 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~--~~~---~lvGivt~~dl~~~~~~~~----------~---- 85 (153)
T 3oco_A 25 VMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADN--DKD---KIIGYAYNYDIVRQARIDD----------K---- 85 (153)
T ss_dssp HSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETT--EEE---EEEEEEEHHHHHHHHHHHT----------T----
T ss_pred EecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECC--CCC---cEEEEEEHHHHHhHHhcCC----------C----
Confidence 4654 78999999999999999999999999999 42 124 8999999999998765331 1
Q ss_pred ccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 208 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 208 ~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
..++++| ++++++.+++++.+|++.|.+++++.+||+|++|+++|++|..|++..+..
T Consensus 86 --------~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 86 --------AKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp --------SBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred --------CcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 1345558 789999999999999999999999999999999999999999999987653
No 78
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=4.9e-15 Score=122.45 Aligned_cols=133 Identities=14% Similarity=0.189 Sum_probs=102.9
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHhhCCcce-EEEEecCCCCCCcceEEEeechHhHHHHHHhhccc-CCCCcccccccc
Q 018309 129 GRPCPRPLVQAGPYDSLKEVALKILQNKVAT-VPIIHSTGPAGSCQEILYLASLSDILKCICRHFKH-SSSSLPILQQPV 206 (358)
Q Consensus 129 ~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~-lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~-~~~~~~~~~~~v 206 (358)
+.+|.++++++++++++.+|++.|.++++++ +||+|+ + +++|++|..|+++++...... ... ...+....
T Consensus 19 ~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~----~---~~vGivt~~dl~~~~~~~~~~~~~~-~~~~~~~~ 90 (157)
T 1o50_A 19 CKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD----N---KLVGMIPVMHLLKVSGFHFFGFIPK-EELIRSSM 90 (157)
T ss_dssp TTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET----T---EEEEEEEHHHHHHHHHHHHHCCCC--------CC
T ss_pred hhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC----C---EEEEEEEHHHHHHHHhhhHHhhhcc-HHHHHHHH
Confidence 3478899999999999999999999999999 999974 2 699999999999876532100 000 00000000
Q ss_pred cccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 207 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 207 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
. ......+.++|.+ ++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++.+.+
T Consensus 91 ~----~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 91 K----RLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp C----CCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred H----HHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 0 0112356777988 9999999999999999999999999999988999999999999986653
No 79
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.63 E-value=9.6e-16 Score=122.46 Aligned_cols=114 Identities=10% Similarity=0.108 Sum_probs=94.2
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 131 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 131 ~~~--~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+|. .+++++++++++.+|++.|.+++++++||+++ +.| +++|++|..|+++++.. ...
T Consensus 10 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~-----------~~~---- 69 (129)
T 3jtf_A 10 IMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYED--DRD---NIIGILLAKDLLRYMLE-----------PAL---- 69 (129)
T ss_dssp HCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESS--STT---CEEEEEEGGGGGGGGTC-----------TTS----
T ss_pred hCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcC--CCC---cEEEEEEHHHHHhHhcc-----------CCc----
Confidence 455 57789999999999999999999999999964 225 79999999999873320 111
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
.++++|.+ ++++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|+++.+.
T Consensus 70 --------~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 70 --------DIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp --------CGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred --------CHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 24455654 789999999999999999999999999999999999999999998654
No 80
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.62 E-value=4.1e-15 Score=121.79 Aligned_cols=119 Identities=15% Similarity=0.191 Sum_probs=97.6
Q ss_pred CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccccccc
Q 018309 134 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 213 (358)
Q Consensus 134 ~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 213 (358)
.+++++++++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++...... .... .
T Consensus 25 ~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~----------~~~~----~ 84 (150)
T 3lqn_A 25 EKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP---MY---KLHGLISTAMILDGILGLERI----------EFER----L 84 (150)
T ss_dssp GGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHTBCSSSB----------CGGG----G
T ss_pred CceEEECCCCcHHHHHHHHHHcCCcEEEEECC---CC---CEEEEEEHHHHHHHHHhhccc----------chhH----H
Confidence 46899999999999999999999999999975 45 899999999999865422110 0000 0
Q ss_pred ccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 214 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 214 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
....++++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|++|.+|+++.+.+
T Consensus 85 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 85 EEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp GGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 1134667788899999999999999999999987 9999999999999999999997654
No 81
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=5.9e-15 Score=123.03 Aligned_cols=116 Identities=19% Similarity=0.282 Sum_probs=99.3
Q ss_pred CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccccccc
Q 018309 134 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 213 (358)
Q Consensus 134 ~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 213 (358)
.+++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++...... ....
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~------~~~~--------- 93 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA---DG---VVLGIFTERDLVKAVAGQGAA------SLQQ--------- 93 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHHHHHGGG------GGTS---------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---CC---eEEEEEEHHHHHHHHHhcCCc------cccC---------
Confidence 36889999999999999999999999999974 45 899999999999987654311 0122
Q ss_pred ccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 214 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 214 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
.++++|.++++++.+++++.+|++.|.+++++++||+|+ |+++|+||..|++..+.+
T Consensus 94 ---~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 94 ---SVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp ---BGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred ---CHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 355568888999999999999999999999999999998 999999999999997654
No 82
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.62 E-value=1.6e-15 Score=124.22 Aligned_cols=116 Identities=16% Similarity=0.227 Sum_probs=97.9
Q ss_pred CCCCCC--CceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccc
Q 018309 129 GRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 206 (358)
Q Consensus 129 ~~~~~~--~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v 206 (358)
+.+|.+ +++++++++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++..... ....
T Consensus 31 ~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~-------~~~~-- 95 (149)
T 3k2v_A 31 NDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD---DM---NIIGIFTDGDLRRVFDTGVD-------MRDA-- 95 (149)
T ss_dssp GGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT---TC---BEEEEEEHHHHHHHHCSSSC-------CTTC--
T ss_pred HHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---cEEEEecHHHHHHHHhcCCC-------cccC--
Confidence 346887 8999999999999999999999999999975 45 89999999999986643211 0122
Q ss_pred cccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHH
Q 018309 207 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 270 (358)
Q Consensus 207 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~ 270 (358)
.++++|.+++.++.+++++.+|++.|.+++++.+||+|++ +++|+||.+|+++
T Consensus 96 ----------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 96 ----------SIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp ----------BHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred ----------cHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 3455587889999999999999999999999999999975 9999999999864
No 83
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.61 E-value=5.7e-15 Score=124.31 Aligned_cols=119 Identities=7% Similarity=0.048 Sum_probs=99.2
Q ss_pred CCCCCCC--CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccc
Q 018309 127 GNGRPCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ 204 (358)
Q Consensus 127 ~~~~~~~--~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~ 204 (358)
.++.+|. .+++++++++++.+|++.|.+++++++||+++ +.| +++|+++.+|+++++.... ..
T Consensus 37 ~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~Dl~~~~~~~~----------~~ 101 (173)
T 3ocm_A 37 SIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG--SLD---EVVGIGRAKDLVADLITEG----------RV 101 (173)
T ss_dssp CSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------SC
T ss_pred CHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---CEEEEEEHHHHHHHHhcCC----------cc
Confidence 4566785 46889999999999999999999999999964 224 7999999999998765321 11
Q ss_pred cccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 205 PVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 205 ~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
+ +. |.++++++.+++++.+|++.|.+++++.+||+|++|+++|+||..|++..+..
T Consensus 102 ~------------v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 102 R------------RN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp C------------GG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHC
T ss_pred h------------hH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhC
Confidence 1 22 23467899999999999999999999999999999999999999999997654
No 84
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.61 E-value=3.3e-15 Score=120.10 Aligned_cols=115 Identities=17% Similarity=0.271 Sum_probs=96.7
Q ss_pred CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccccccc
Q 018309 134 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 213 (358)
Q Consensus 134 ~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 213 (358)
++++++++++++.+|++.|.+++.+++||+| +| +++|+++..|+++++..... . .
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~------~------------~ 71 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK----DE---KLVGILTERDFSRKSYLLDK------P------------V 71 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHGGGSSS------C------------G
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEehHHHHHHHHHcCC------C------------c
Confidence 6889999999999999999999999999996 25 89999999999874432110 0 0
Q ss_pred ccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 214 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 214 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
....++++|.+++.++.+++++.+|++.|.+++++.+||+| +|+++|++|.+|++..+.+
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 72 KDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp GGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 11245666888899999999999999999999999999999 7999999999999986643
No 85
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.61 E-value=4.1e-15 Score=120.64 Aligned_cols=119 Identities=22% Similarity=0.231 Sum_probs=96.7
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
+|.++++++.+++++.+|++.|.+++.+++||+|+ +| +++|+++..|+++++..... .....+
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~------~~~~~~----- 78 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NG---YLINVYEAYDVLGLIKGGIY------NDLSLS----- 78 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHTC----------CCSB-----
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC---CC---cEEEEEcHHHHHHHhccccc------ccCCcc-----
Confidence 56788999999999999999999999999999974 35 89999999999987653210 001222
Q ss_pred cccccccccccCCC------CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 211 LGTWVPRIGEANGR------PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 211 i~~~~~~v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
+.++|.+ ++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|+++.+.
T Consensus 79 -------v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 79 -------VGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp -------HHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred -------HHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 3333543 5889999999999999999999999999998999999999999998654
No 86
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.61 E-value=6.8e-15 Score=120.91 Aligned_cols=115 Identities=19% Similarity=0.237 Sum_probs=96.2
Q ss_pred CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccccccc
Q 018309 134 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 213 (358)
Q Consensus 134 ~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 213 (358)
++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+++++...... ....+
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~vGivt~~dl~~~~~~~~~~------~~~~~-------- 88 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE---KG---RVVDIYSKFDVINLAAEKTYN------NLDVS-------- 88 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT---TS---BEEEEEEHHHHHHHHHCSSCC------CTTSB--------
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECC---CC---cEEEEEeHHHHHHHhcchhhh------hhcch--------
Confidence 67889999999999999999999999999975 45 899999999999866532100 01222
Q ss_pred ccccccccCC------CCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 214 WVPRIGEANG------RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 214 ~~~~v~~~m~------~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
+.++|. +++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|+++.+
T Consensus 89 ----v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 89 ----VTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp ----GGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred ----HHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 334454 6788999999999999999999999999999889999999999999865
No 87
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.61 E-value=4.3e-15 Score=126.20 Aligned_cols=121 Identities=13% Similarity=0.128 Sum_probs=101.7
Q ss_pred CCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 129 GRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 129 ~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+.+|.++++++++++++.+|++.|.+++++++||+|+ +| +++|+++.+|+++++......
T Consensus 12 ~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~---~g---~~vGivt~~dl~~~~~~~~~~-------------- 71 (184)
T 1pvm_A 12 EKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD---NG---NDVGLLSERSIIKRFIPRNKK-------------- 71 (184)
T ss_dssp GGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT---TS---CEEEEEEHHHHHHHTGGGCCC--------------
T ss_pred HHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHhhcccC--------------
Confidence 3468889999999999999999999999999999964 35 899999999999865422100
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
.....++++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|..|++..+.
T Consensus 72 ----~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 ----PDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp ----GGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred ----cccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 0112456668888999999999999999999999999999998899999999999998554
No 88
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.60 E-value=6.6e-15 Score=121.43 Aligned_cols=124 Identities=15% Similarity=0.233 Sum_probs=100.4
Q ss_pred CCCCCC--CceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccc
Q 018309 129 GRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 206 (358)
Q Consensus 129 ~~~~~~--~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v 206 (358)
+.+|.+ +++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++..... .. .
T Consensus 14 ~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~--------~~--~ 77 (157)
T 2emq_A 14 KPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT---SY---KLHGLISMTMMMDAILGLER--------IE--F 77 (157)
T ss_dssp TTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT---TC---CEEEEEEHHHHHHHSBCSSS--------BC--G
T ss_pred HhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC---CC---CEEEEeeHHHHHHHHhcccc--------cc--h
Confidence 446775 8899999999999999999999999999974 45 89999999999985432110 00 0
Q ss_pred cccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 207 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 207 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
.. .....+.++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|+||.+|++..+..
T Consensus 78 ~~----~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 78 ER----LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp GG----GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred HH----hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 00 01134667788899999999999999999999987 9999988999999999999987654
No 89
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.60 E-value=4.1e-15 Score=122.89 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=94.8
Q ss_pred CCCCCCC--CceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccc
Q 018309 128 NGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 205 (358)
Q Consensus 128 ~~~~~~~--~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~ 205 (358)
++.+|.+ +++++++++++.+|++.|.+++++++||+++ +.| +++|++|..|+++++... ..
T Consensus 40 v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~----------~~-- 102 (156)
T 3oi8_A 40 VRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE--DKD---EVLGILHAKDLLKYMFNP----------EQ-- 102 (156)
T ss_dssp GGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGSSCG----------GG--
T ss_pred HhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHcC----------Cc--
Confidence 3457875 7899999999999999999999999999964 223 799999999998732110 11
Q ss_pred ccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHH
Q 018309 206 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT 269 (358)
Q Consensus 206 v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~ 269 (358)
..++++|.+ +.++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|++
T Consensus 103 ----------~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 103 ----------FHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp ----------CCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred ----------ccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 234555755 78999999999999999999999999999999999999999985
No 90
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.60 E-value=1.7e-14 Score=128.14 Aligned_cols=209 Identities=11% Similarity=0.162 Sum_probs=128.1
Q ss_pred CcccccccCCCCcceEEEEcCCCCHHHHHHHHHHCCCCeeeceeCCCCeEEEeeehHHHHHHHHHhccCCCCCCHHHHhh
Q 018309 27 HSCPHIQYTSSFLTQVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 106 (358)
Q Consensus 27 ~~~~~~~~~~~~~~~vv~~~~~~sl~~a~~~m~~~~i~~~pV~d~~~~~~vGilt~~Di~~~l~~~~~~~~~~~~~~l~~ 106 (358)
.++.|+|- ++++++++++|+.+|++.|.++++.++||+|.+ ++++|++|..|+...+.... .........
T Consensus 7 ~~v~~im~-----~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~----~~~~~~~~~ 76 (245)
T 3l2b_A 7 LKVEDLEM-----DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIW----DSNILAKSA 76 (245)
T ss_dssp CBGGGSCC-----BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCC----CTTHHHHTT
T ss_pred CcHHHhcC-----CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhh----hhhhhhhcc
Confidence 34667763 467899999999999999999999999999964 79999999999998654211 110011111
Q ss_pred cchHHHHHHHHhhccccc--cCC------------------CCCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecC
Q 018309 107 HTISAWKVGKLQLNLKRQ--MDG------------------NGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHST 166 (358)
Q Consensus 107 ~~i~~~~~~~~~~~~~~~--~d~------------------~~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~ 166 (358)
.....+ ......... .+. ........++.+ .+ -.++...+.++++..+++++..
T Consensus 77 ~~~~~v---~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIv-gd--r~~~~~~~i~~~~~~liit~~~ 150 (245)
T 3l2b_A 77 TSLDNI---LDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIA-GD--RAEIQAELIELKVSLLIVTGGH 150 (245)
T ss_dssp CCHHHH---HHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEE-CS--CHHHHHHHHHTTCSEEEECTTC
T ss_pred CCHHHH---HHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEE-CC--CHHHHHHHHHcCCCEEEECCCC
Confidence 122221 111110000 000 000112233333 22 3788888889999999888431
Q ss_pred CCCC------CcceEEEeechHhHHHHHHhhcccCCCCcccccccccccccccccccccccCC-CCceEecCCCCHHHHH
Q 018309 167 GPAG------SCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANG-RPFAMLRPTASLGSAL 239 (358)
Q Consensus 167 ~~~g------~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~v~~~m~-~~~~~v~~~~~l~~a~ 239 (358)
.... ....+..+.+..|........ .....++++|+ +++.++.+++++.+|+
T Consensus 151 ~~~~~v~~~a~~~~~~~i~t~~d~~~~~~~~---------------------~~~~~v~~im~~~~~~~~~~~~~~~~~~ 209 (245)
T 3l2b_A 151 TPSKEIIELAKKNNITVITTPHDSFTASRLI---------------------VQSLPVDYVMTKDNLVAVSTDDLVEDVK 209 (245)
T ss_dssp CCCHHHHHHHHHHTCEEEECSSCHHHHHHHG---------------------GGGSBHHHHSBCTTCCCEETTSBHHHHH
T ss_pred CCCHHHHHHHHHcCCeEEEeCCChHHHHHHH---------------------hcCCceeeEecCCccEEECCCCcHHHHH
Confidence 1110 000123344444433211100 11124667798 8899999999999999
Q ss_pred HHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 240 ALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 240 ~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
+.|.+++++++||+|++|+++|++|.+|+++..
T Consensus 210 ~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 210 VTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp HHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred HHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 999999999999999999999999999998754
No 91
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.60 E-value=2.1e-15 Score=124.39 Aligned_cols=121 Identities=17% Similarity=0.199 Sum_probs=99.3
Q ss_pred CCC--CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 131 PCP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 131 ~~~--~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+|. .+++++++++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++....... .....
T Consensus 20 im~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~dl~~~~~~~~~~~---~~~~~----- 85 (156)
T 3ctu_A 20 FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD---EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMAD----- 85 (156)
T ss_dssp GEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC----C---BEEEEEEHHHHHHHHHHHTCCH---HHHTT-----
T ss_pred HcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC---CC---EEEEEEcHHHHHHHHHhccccc---ccccc-----
Confidence 566 67899999999999999999999999999975 45 8999999999999876532110 00011
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
..++++|.++++++.+++++.+|++.|.+++ ++||+|++|+++|++|.+|+++.+.+
T Consensus 86 -------~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 86 -------TDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp -------SBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHH
T ss_pred -------CcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 2455668888999999999999999999886 79999999999999999999997754
No 92
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.59 E-value=4.1e-15 Score=146.66 Aligned_cols=123 Identities=19% Similarity=0.231 Sum_probs=105.4
Q ss_pred ccccccCCCCceEecCC-CCHHHHHHHHHhCCCCEEEEEc-CCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhc
Q 018309 216 PRIGEANGRPFAMLRPT-ASLGSALALLVQADVSSIPIVD-DNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQL 293 (358)
Q Consensus 216 ~~v~~~m~~~~~~v~~~-~~l~~a~~~m~~~~~~~vpVvd-~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~ 293 (358)
.+++++|.++++++.++ +++.+|+++|.+++++++||+| ++|+++|+||.+||++.+..+.. ..+.++.+
T Consensus 384 ~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~----~~~~~V~~---- 455 (527)
T 3pc3_A 384 LAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNR----QQSDPAIK---- 455 (527)
T ss_dssp SBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCC----CTTSBGGG----
T ss_pred CcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccC----cCCCcHHH----
Confidence 46888999999999999 9999999999999999999999 78999999999999986543311 11356666
Q ss_pred CCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCC---CCeEEEEEehHHHHHHhhc
Q 018309 294 GQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAG---SKRVEGIISLSDVFRFLLG 357 (358)
Q Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~---~~~liGvis~~Dil~~~~~ 357 (358)
+|.++++++++++++.++++.|.++++ +||||++ .|+++|+||+.||++++..
T Consensus 456 ---------im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 456 ---------ALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp ---------GEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred ---------HhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHh
Confidence 788899999999999999999987775 7999941 3899999999999999864
No 93
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.59 E-value=9.3e-15 Score=132.47 Aligned_cols=121 Identities=17% Similarity=0.246 Sum_probs=103.9
Q ss_pred cccCCCCCCCCCCceEeCCCCCHHHHHHHHhhC-----CcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCC
Q 018309 123 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 197 (358)
Q Consensus 123 ~~~d~~~~~~~~~~v~v~~~~sl~~al~~m~~~-----~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~ 197 (358)
+....+|.+|.++++++.+++++.+|++.|.++ +++++||+|+ +| +++|++|.+|++..
T Consensus 132 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~---------- 195 (278)
T 2yvy_A 132 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA---------- 195 (278)
T ss_dssp SCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT---TC---BEEEEEEHHHHHHS----------
T ss_pred CCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECC---CC---CEEEEEEHHHHhcC----------
Confidence 556677889999999999999999999999987 7899999975 45 89999999999861
Q ss_pred CcccccccccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 198 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 198 ~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
... ..++++|.++++++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++..+..
T Consensus 196 ---~~~------------~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 196 ---DPR------------TRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp ---CTT------------CBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred ---CCC------------CcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 011 23556688889999999999999999999999999999999999999999999987654
No 94
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.59 E-value=1.5e-15 Score=121.68 Aligned_cols=116 Identities=16% Similarity=0.251 Sum_probs=96.7
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHH-HHHhhcccCCCCccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICRHFKHSSSSLPILQQPVSSI 209 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~-~l~~~~~~~~~~~~~~~~~v~~l 209 (358)
+|.++++++++++++.+|++.|.+++.+.+||+|+ +| +++|+++..|+++ ++..... ...
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~-------~~~------ 73 (133)
T 1y5h_A 13 IMNAGVTCVGEHETLTAAAQYMREHDIGALPICGD---DD---RLHGMLTDRDIVIKGLAAGLD-------PNT------ 73 (133)
T ss_dssp HSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG---GG---BEEEEEEHHHHHHTTGGGTCC-------TTT------
T ss_pred HhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC---CC---eEEEEEeHHHHHHHHHhcCCC-------ccc------
Confidence 46678889999999999999999999999999965 35 8999999999984 3321110 011
Q ss_pred ccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 210 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 210 ~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
..++++|.+++.++.+++++.+|++.|.+++.+++||+|+ |+++|++|.+|+++.+
T Consensus 74 ------~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 74 ------ATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp ------SBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred ------cCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 2455668888999999999999999999999999999997 9999999999999854
No 95
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.58 E-value=6.7e-15 Score=133.95 Aligned_cols=121 Identities=14% Similarity=0.186 Sum_probs=104.6
Q ss_pred cccCCCCCCCCCCceEeCCCCCHHHHHHHHhhC-----CcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCC
Q 018309 123 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 197 (358)
Q Consensus 123 ~~~d~~~~~~~~~~v~v~~~~sl~~al~~m~~~-----~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~ 197 (358)
+....++.+|.++++++++++++.+|++.|.++ +++++||+|+ +| +++|++|.+|+++.
T Consensus 134 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~---~~---~lvGivt~~dll~~---------- 197 (286)
T 2oux_A 134 YEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ---EN---HLVGVISLRDLIVN---------- 197 (286)
T ss_dssp SCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT---TC---BEEEEEEHHHHTTS----------
T ss_pred CChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC---CC---eEEEEEEHHHHHcC----------
Confidence 556667788999999999999999999999987 7889999975 45 89999999998761
Q ss_pred CcccccccccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 198 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 198 ~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
... ..++++|.++++++++++++.+|++.|.+++++.+||+|++|+++|+||..|++..+.+
T Consensus 198 ---~~~------------~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 198 ---DDD------------TLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp ---CTT------------SBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ---CCC------------CcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 011 23555688889999999999999999999999999999999999999999999987654
No 96
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.57 E-value=1.7e-14 Score=119.03 Aligned_cols=116 Identities=13% Similarity=0.240 Sum_probs=98.0
Q ss_pred CCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccccccc
Q 018309 134 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 213 (358)
Q Consensus 134 ~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 213 (358)
++++++.+++++.+|++.|.+++++.+||.+ +| +++|++|..|+++++...... ...
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~----~~---~~~Givt~~dl~~~~~~~~~~------~~~---------- 77 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVD----GD---DIAGIVTERDYARKVVLQERS------SKA---------- 77 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEES----SS---SEEEEEEHHHHHHHSGGGTCC------SSS----------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEee----CC---EEEEEEEHHHHHHHHHhccCC------ccc----------
Confidence 5789999999999999999999999999963 35 799999999999866543211 012
Q ss_pred ccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcc
Q 018309 214 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 275 (358)
Q Consensus 214 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~ 275 (358)
..++++|.+++.++.+++++.+|++.|.+++++.+||+| +|+++|++|.+|+++.+...
T Consensus 78 --~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 78 --TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp --CBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred --cCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 245556888899999999999999999999999999999 79999999999999977644
No 97
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.56 E-value=7.7e-15 Score=123.72 Aligned_cols=137 Identities=18% Similarity=0.269 Sum_probs=99.8
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccC--CCCccccccc-
Q 018309 131 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHS--SSSLPILQQP- 205 (358)
Q Consensus 131 ~~~~--~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~--~~~~~~~~~~- 205 (358)
+|.+ +++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|++++........ ..........
T Consensus 9 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 9 FMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD---NW---TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp HSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHTCC-------------------CC
T ss_pred hcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECC---CC---eEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4555 7899999999999999999999999999975 45 8999999999986432111000 0000000000
Q ss_pred -----ccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 206 -----VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 206 -----v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
...+........++++|.++++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAAL 155 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 00000011223577789888999999999999999999999999999999999999999999998664
No 98
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.56 E-value=3.3e-14 Score=138.00 Aligned_cols=121 Identities=17% Similarity=0.257 Sum_probs=105.3
Q ss_pred cccCCCCCCCCCCceEeCCCCCHHHHHHHHhhC-----CcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCC
Q 018309 123 RQMDGNGRPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS 197 (358)
Q Consensus 123 ~~~d~~~~~~~~~~v~v~~~~sl~~al~~m~~~-----~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~ 197 (358)
|..+.++++|.++++++++++++.+|++.|.++ +++++||+|+ ++ +++|+++.+|++.. .
T Consensus 152 ~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~---~~---~lvGiVt~~Dll~~------~--- 216 (473)
T 2zy9_A 152 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA------D--- 216 (473)
T ss_dssp SCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT---TS---BEEEEEEHHHHHHS------C---
T ss_pred CCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC---CC---cEEEEEEHHHHhcC------C---
Confidence 667788999999999999999999999999986 5899999975 35 89999999999861 0
Q ss_pred CcccccccccccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 198 SLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 198 ~~~~~~~~v~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
.+. .++++|+++++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++.+.+
T Consensus 217 ----~~~------------~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 ----PRT------------RVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp ----TTS------------BGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ----CCC------------cHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 122 3556688889999999999999999999999999999999999999999999987653
No 99
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.55 E-value=1e-14 Score=120.71 Aligned_cols=122 Identities=9% Similarity=0.105 Sum_probs=98.4
Q ss_pred CCCC--CceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccc
Q 018309 131 PCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSS 208 (358)
Q Consensus 131 ~~~~--~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~ 208 (358)
+|.+ +++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++...... ....
T Consensus 19 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~---~~---~lvGivt~~dl~~~~~~~~~~----------~~~~ 82 (159)
T 1yav_A 19 FMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP---SY---RLHGLIGTNMIMNSIFGLERI----------EFEK 82 (159)
T ss_dssp HSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT---TC---BEEEEEEHHHHHHHHBCSSSB----------CGGG
T ss_pred HhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC---CC---CEEEEeEHHHHHHHhhhhccc----------chhh
Confidence 3555 7889999999999999999999999999975 45 899999999999866432110 0000
Q ss_pred cccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 209 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 209 l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
.....+.++|.+++.++.+++++.+|++.|.++++ +||+|++|+++|+||.+|++..+..
T Consensus 83 ----~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 83 ----LDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp ----TTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ----hccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 01124566688889999999999999999999877 9999989999999999999987653
No 100
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.55 E-value=5.9e-14 Score=124.70 Aligned_cols=141 Identities=12% Similarity=0.133 Sum_probs=103.4
Q ss_pred CCCCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCC----------
Q 018309 128 NGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS---------- 197 (358)
Q Consensus 128 ~~~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~---------- 197 (358)
++++|.++++++.+++++.+|.++|.+++++++||+|+ .+.| +++|+|+..|+++++.........
T Consensus 15 v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~ 90 (250)
T 2d4z_A 15 VGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADE 90 (250)
T ss_dssp TTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCC
T ss_pred hHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcccc
Confidence 45689999999999999999999999999999999974 2234 799999999999887544211000
Q ss_pred -----------------Cccccccc--------------------------------------------------ccc--
Q 018309 198 -----------------SLPILQQP--------------------------------------------------VSS-- 208 (358)
Q Consensus 198 -----------------~~~~~~~~--------------------------------------------------v~~-- 208 (358)
...+.... ...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (250)
T 2d4z_A 91 EGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEM 170 (250)
T ss_dssp C---------------------------------------------------------------------------CCSC
T ss_pred cccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccc
Confidence 00000000 000
Q ss_pred cc---cccc-----cccc--c-ccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 209 IQ---LGTW-----VPRI--G-EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 209 l~---i~~~-----~~~v--~-~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
+. +..| ...+ . .+|++.++++.+++++.+|..+|...|++++||++ .|+++|+||+.|+++++.
T Consensus 171 i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 171 LTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp CBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 00 0000 0122 2 35888999999999999999999999999999997 699999999999999765
No 101
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.55 E-value=1.5e-14 Score=140.49 Aligned_cols=117 Identities=18% Similarity=0.271 Sum_probs=104.4
Q ss_pred ccccccCCCCceEecCCCCHHHHHHHHHhC-----CCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHH
Q 018309 216 PRIGEANGRPFAMLRPTASLGSALALLVQA-----DVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 290 (358)
Q Consensus 216 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~ 290 (358)
.+++++|+++++++++++++.+|++.|.++ +++++||+|++++++|++|.+|++.. . .+.++.+
T Consensus 155 ~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~---~-------~~~~v~d- 223 (473)
T 2zy9_A 155 DEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA---D-------PRTRVAE- 223 (473)
T ss_dssp TBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS---C-------TTSBGGG-
T ss_pred CCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC---C-------CCCcHHH-
Confidence 467788999999999999999999999986 58999999999999999999999862 0 1356666
Q ss_pred HhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 291 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 291 l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.++++++++++++.++++.|.+++.+.+|||| ++|+++|+||..|+++.+.
T Consensus 224 ------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD-e~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 224 ------------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD-EEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp ------------TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------------HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc-CCCEEEEEEehHhhHHHHH
Confidence 8878899999999999999999999999999999 5899999999999998864
No 102
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.54 E-value=3.4e-14 Score=117.87 Aligned_cols=124 Identities=14% Similarity=0.147 Sum_probs=96.9
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
+|.++++++++++++.+|++.|.+++++++||+|++ ++| +++|++|..|+++++....... ......
T Consensus 18 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~-~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~~------ 84 (164)
T 2pfi_A 18 FMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVEST-ESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQQ------ 84 (164)
T ss_dssp HCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCT-TTC---BEEEEEEHHHHHHHHHC----------CCCC------
T ss_pred HcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecC-CCC---EEEEEEEHHHHHHHHHhhcccc---CCcccc------
Confidence 467789999999999999999999999999999631 235 8999999999998765322110 000112
Q ss_pred cccccccccccCCCC------ceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 211 LGTWVPRIGEANGRP------FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 211 i~~~~~~v~~~m~~~------~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
.+.++|..+ +.++.+++++.+|++.|.+++.+++||+| +|+++|++|.+|+++.+.+
T Consensus 85 ------~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 85 ------CLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp ------BHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ------hhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 233334443 78999999999999999999999999999 7999999999999986653
No 103
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.53 E-value=2.6e-15 Score=150.92 Aligned_cols=139 Identities=17% Similarity=0.074 Sum_probs=103.3
Q ss_pred ccccccCC--CCceEecCCCCHHHHHHHHH-hCCCCEEEEEcCCCcEEEEEeHHHHHHHHhccccc-ccc---------c
Q 018309 216 PRIGEANG--RPFAMLRPTASLGSALALLV-QADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYA-QIH---------L 282 (358)
Q Consensus 216 ~~v~~~m~--~~~~~v~~~~~l~~a~~~m~-~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~-~l~---------~ 282 (358)
.+++++|+ +++.++++++++.++.+.|. +++++++||+|++|+++|++|++|+.+.+..+... ... .
T Consensus 453 ~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~ 532 (632)
T 3org_A 453 MTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLL 532 (632)
T ss_dssp SBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC-----------------
T ss_pred CcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceecc
Confidence 46889999 88999999999999999999 79999999999999999999999999865432100 000 0
Q ss_pred cc----ccHHHHHhcC---------------CCCCCCc-ccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeE
Q 018309 283 DE----MNIHQALQLG---------------QDANPSL-GFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRV 342 (358)
Q Consensus 283 ~~----~~v~~~l~~~---------------~~~~~~~-~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~l 342 (358)
.. ..++...... ..+..+. ++|+++++++++++++.+|.+.|.+++++++||++ +|++
T Consensus 533 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve--~G~l 610 (632)
T 3org_A 533 DAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE--RGKL 610 (632)
T ss_dssp --------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE--TTEE
T ss_pred CHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE--CCEE
Confidence 00 0001100000 0011112 38999999999999999999999999999999996 4999
Q ss_pred EEEEehHHHHHHhh
Q 018309 343 EGIISLSDVFRFLL 356 (358)
Q Consensus 343 iGvis~~Dil~~~~ 356 (358)
+|+||++|+++++.
T Consensus 611 vGIVT~~Dll~~~~ 624 (632)
T 3org_A 611 VGIVEREDVAYGYS 624 (632)
T ss_dssp EEEEEGGGTEECCC
T ss_pred EEEEehhhHHHHHh
Confidence 99999999987654
No 104
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.53 E-value=7.2e-14 Score=118.33 Aligned_cols=134 Identities=10% Similarity=0.128 Sum_probs=99.8
Q ss_pred ceEe--CCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCC----ccccccccccc
Q 018309 136 LVQA--GPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSS----LPILQQPVSSI 209 (358)
Q Consensus 136 ~v~v--~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~----~~~~~~~v~~l 209 (358)
++++ .+++++.+|++.|.+++++++||+++ +++| +++|++|..|+++++.......... ...+.....+.
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~-d~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVS-RESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEE-CCCC---eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 7788 99999999999999999999999931 1245 8999999999999876542110000 00000000000
Q ss_pred c-cccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 210 Q-LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 210 ~-i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
. .......++++|.++++++.+++++.+|++.|.+++.+++||+| +|+++|+||.+|+++.+.+
T Consensus 101 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 101 PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 0 00112357788988899999999999999999999999999999 8999999999999987653
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.50 E-value=1.3e-13 Score=134.79 Aligned_cols=114 Identities=16% Similarity=0.249 Sum_probs=101.3
Q ss_pred ccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcC--CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCC
Q 018309 220 EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD--NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDA 297 (358)
Q Consensus 220 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~--~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~ 297 (358)
+.|..+++++.+++++.+++++|.+++++++||+|+ +++++|+||.+|+.. .. . .+.++.+
T Consensus 117 ~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~---~~---~---~~~~V~~-------- 179 (511)
T 3usb_A 117 SGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF---IQ---D---YSIKISD-------- 179 (511)
T ss_dssp SCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT---CC---C---SSSBHHH--------
T ss_pred cccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh---hc---c---CCCcHHH--------
Confidence 447778899999999999999999999999999998 899999999999964 11 1 1467787
Q ss_pred CCCcccCCc-cceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 298 NPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 298 ~~~~~~~~~-~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.+ +++++++++++.++++.|.+++++.+|||| ++|+++|+||..|+++.+.
T Consensus 180 -----vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVD-e~g~l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 180 -----VMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVD-NNGVLQGLITIKDIEKVIE 233 (511)
T ss_dssp -----HCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred -----hcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEe-CCCCEeeeccHHHHHHhhh
Confidence 7776 899999999999999999999999999999 5899999999999999863
No 106
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.44 E-value=6.1e-13 Score=130.10 Aligned_cols=115 Identities=19% Similarity=0.288 Sum_probs=101.7
Q ss_pred cccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEc--CCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCC
Q 018309 219 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVD--DNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQD 296 (358)
Q Consensus 219 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd--~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 296 (358)
.++|..+++++.+++++.++++.|.+++++++||+| ++++++|+||.+|++... . .+.++.+
T Consensus 93 ~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~------~---~~~~v~~------- 156 (491)
T 1zfj_A 93 ENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS------D---YNAPISE------- 156 (491)
T ss_dssp TTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS------C---SSSBTTT-------
T ss_pred HhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc------c---CCCcHHH-------
Confidence 345888899999999999999999999999999999 789999999999998631 0 1345555
Q ss_pred CCCCcccCCc-cceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 297 ANPSLGFNGQ-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 297 ~~~~~~~~~~-~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.+ +++++++++++.++++.|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 157 ------im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd-~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 157 ------HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD-NSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp ------SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC-TTSBEEEEEEHHHHHHHHH
T ss_pred ------HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEEHHHHHHHHh
Confidence 7877 899999999999999999999999999999 5899999999999999875
No 107
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.42 E-value=6.2e-14 Score=136.50 Aligned_cols=114 Identities=15% Similarity=0.255 Sum_probs=86.7
Q ss_pred cccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 018309 219 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 298 (358)
Q Consensus 219 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~ 298 (358)
.+.|..+++++.+++++.+++++|.+++++++||+|++++++|+||.+|+... . ..+.++.+
T Consensus 92 ~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~---~------~~~~~v~d--------- 153 (496)
T 4fxs_A 92 EAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV---T------DLTKSVAA--------- 153 (496)
T ss_dssp CC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC---C------CTTSBGGG---------
T ss_pred ccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc---c------cCCCcHHH---------
Confidence 34477789999999999999999999999999999999999999999999621 1 11355666
Q ss_pred CCcccCC-c-cceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 018309 299 PSLGFNG-Q-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 355 (358)
Q Consensus 299 ~~~~~~~-~-~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~ 355 (358)
+|. + +++++++++++.++++.|.+++++.+|||| ++|+++|+||+.|+++..
T Consensus 154 ----iM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 154 ----VMTPKERLATVKEGATGAEVQEKMHKARVEKILVVN-DEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp ----TSEEGGGCCEEECC----CGGGTCC---CCCEEEEC-TTSBCCEEECCC-----C
T ss_pred ----HhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc-CCCCEEEeehHhHHHHhh
Confidence 676 3 599999999999999999999999999999 589999999999999864
No 108
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.42 E-value=3.3e-12 Score=124.77 Aligned_cols=156 Identities=12% Similarity=0.151 Sum_probs=118.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
.|..+++++++++++.+++++|.+++++++||+|+. .++ +++|++|.+|+.. . .....
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~---~lvGiVt~rDl~~-------~-----~~~~~------ 175 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DER---KLVGIITNRDMRF-------I-----QDYSI------ 175 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTC---BEEEEEEHHHHTT-------C-----CCSSS------
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCC---EEEEEEEehHhhh-------h-----ccCCC------
Confidence 577788999999999999999999999999999631 134 8999999999854 0 01122
Q ss_pred cccccccccccCCC-CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHH
Q 018309 211 LGTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 289 (358)
Q Consensus 211 i~~~~~~v~~~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~ 289 (358)
.+.++|++ +++++++++++.++++.|.+++++.+||+|++|+++|++|..|+++....... +.+
T Consensus 176 ------~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a---------~~D 240 (511)
T 3usb_A 176 ------KISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNS---------AKD 240 (511)
T ss_dssp ------BHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTC---------CBC
T ss_pred ------cHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccc---------hhh
Confidence 34555887 89999999999999999999999999999999999999999999997653211 111
Q ss_pred HHhcCCCCCCCcccCCcc--ceEEcCCCCHHHHHHHHhcCCCCEEEEEe
Q 018309 290 ALQLGQDANPSLGFNGQR--CQMCLRSDPLHKVMERLANPGVRRLVIVE 336 (358)
Q Consensus 290 ~l~~~~~~~~~~~~~~~~--~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 336 (358)
.+.+. ...+.......+.++.+.+.++..+++-.
T Consensus 241 -------------~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 241 -------------KQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp -------------TTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred -------------hccceeeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 11111 22344444556667788888888776654
No 109
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.41 E-value=4.4e-13 Score=132.12 Aligned_cols=122 Identities=13% Similarity=0.133 Sum_probs=101.6
Q ss_pred CCCCCCCCceEeCCC-CCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccc
Q 018309 128 NGRPCPRPLVQAGPY-DSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPV 206 (358)
Q Consensus 128 ~~~~~~~~~v~v~~~-~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v 206 (358)
++++|.++++++.++ +++.+|+++|.+++++++||+|. ++| +++|+||.+|+++++...... ...
T Consensus 386 V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~--~~g---~lvGiVt~~Dll~~l~~~~~~-------~~~-- 451 (527)
T 3pc3_A 386 IAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQ--DDG---SVLGVVGQETLITQIVSMNRQ-------QSD-- 451 (527)
T ss_dssp GGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECT--TTC---CEEEEEEHHHHHHHHHHHCCC-------TTS--
T ss_pred HHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEEC--CCC---EEEEEEEHHHHHHHHHhccCc-------CCC--
Confidence 456889999999999 99999999999999999999961 145 899999999999977653211 122
Q ss_pred cccccccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCC----CcEEEEEeHHHHHHHHhcc
Q 018309 207 SSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN----DSLLDIYSRSDITALAKDK 275 (358)
Q Consensus 207 ~~l~i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~----g~liGiis~~dl~~~~~~~ 275 (358)
.+.++|.++++++.+++++.+++++|.++++ +||+|++ |+++|+||..||++.+.+.
T Consensus 452 ----------~V~~im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 452 ----------PAIKALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp ----------BGGGGEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred ----------cHHHHhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 3555688899999999999999999987765 7999984 9999999999999977644
No 110
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.38 E-value=3.6e-14 Score=138.76 Aligned_cols=113 Identities=14% Similarity=0.167 Sum_probs=0.0
Q ss_pred CCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCC---CcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 018309 222 NGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN---DSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 298 (358)
Q Consensus 222 m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~---g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~ 298 (358)
|.++++++.+++++.++++.|.+++++++||+|++ |+++|+||.+|++.. . . . .+.++.+
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~-~---~---~~~~V~d--------- 165 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-L-T---Q---TETKVSD--------- 165 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-h-c---c---ccCcHHH---------
Confidence 66789999999999999999999999999999987 899999999999863 1 0 1 1345565
Q ss_pred CCcccCCcc--ceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 299 PSLGFNGQR--CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 299 ~~~~~~~~~--~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.++ ++++++++++.+|++.|.+++++++|||| ++|+++|+||..||++.+.
T Consensus 166 ----iM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 166 ----MMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID-DDQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------------------------------------------
T ss_pred ----HhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEc-CCCeEEEEEEecHHHHhhh
Confidence 67666 99999999999999999999999999999 5899999999999998864
No 111
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.37 E-value=5e-14 Score=137.84 Aligned_cols=115 Identities=16% Similarity=0.289 Sum_probs=4.8
Q ss_pred cccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 018309 219 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 298 (358)
Q Consensus 219 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~ 298 (358)
.++|.++++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+.... . .+.++.+
T Consensus 98 ~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~------~---~~~~v~~--------- 159 (494)
T 1vrd_A 98 ENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK------N---LSKKIKD--------- 159 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc------C---CCCcHHH---------
Confidence 455888899999999999999999999999999999889999999999998621 0 1345555
Q ss_pred CCcccCCc--cceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 299 PSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 299 ~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+|.+ +++++++++++.++++.|.+++++++|||| ++|+++|+||..|+++.+.
T Consensus 160 ----im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 160 ----LMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS-KDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp ------------------------------------------------------CHHHHT
T ss_pred ----HhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEc-CCCeEEEEEEHHHHHhhhc
Confidence 6766 899999999999999999999999999999 5899999999999999864
No 112
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.35 E-value=6.8e-14 Score=136.09 Aligned_cols=113 Identities=14% Similarity=0.272 Sum_probs=0.9
Q ss_pred cccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 018309 219 GEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 298 (358)
Q Consensus 219 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~ 298 (358)
.+.|..+++++.+++++.+++++|.+++++++||+| +|+++|+||.+|+..... .+.++.+
T Consensus 91 ~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~~---------~~~~V~~--------- 151 (490)
T 4avf_A 91 ETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKPN---------AGDTVAA--------- 151 (490)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhccc---------cCCcHHH---------
Confidence 445777899999999999999999999999999999 899999999999963210 1345666
Q ss_pred CCcccCC-c-cceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 018309 299 PSLGFNG-Q-RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 355 (358)
Q Consensus 299 ~~~~~~~-~-~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~ 355 (358)
+|. + +++++++++++.+|++.|.+++++.+|||| ++|+++|+||+.|++++.
T Consensus 152 ----vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD-e~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 152 ----IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVD-ENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp -----------------------------------------------------------
T ss_pred ----HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEehHHhhhhc
Confidence 666 3 699999999999999999999999999999 589999999999999874
No 113
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.30 E-value=3e-11 Score=118.08 Aligned_cols=116 Identities=15% Similarity=0.172 Sum_probs=99.4
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
+|..+++++++++++.++++.|.+++++++||+|. .+++ +++|+++.+|++.. ....
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~------------~~~~------- 151 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFI------------SDYN------- 151 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHC------------SCSS-------
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhh------------ccCC-------
Confidence 68889999999999999999999999999999961 0134 89999999999862 0011
Q ss_pred cccccccccccCCC-CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 211 LGTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 211 i~~~~~~v~~~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
..+.++|++ +++++++++++.++++.|.+++++.+||+|++|+++|++|.+|+++....
T Consensus 152 -----~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 152 -----APISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp -----SBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred -----CcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 245566887 88999999999999999999999999999999999999999999997763
No 114
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.30 E-value=2.2e-13 Score=133.12 Aligned_cols=165 Identities=14% Similarity=0.133 Sum_probs=22.2
Q ss_pred CCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccccc
Q 018309 132 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 211 (358)
Q Consensus 132 ~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i 211 (358)
|.++++++++++++.+|+++|.+++++++||+|++...| +++|++|.+|+++. . .....
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g---~lvGiVt~~Dl~~~------~-----~~~~~------- 161 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHG---VLLGLVTQRDYPID------L-----TQTET------- 161 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCC---eEEEEEEHHHHHhh------h-----ccccC-------
Confidence 777899999999999999999999999999997511114 89999999999762 0 00122
Q ss_pred ccccccccccCCCC--ceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHH
Q 018309 212 GTWVPRIGEANGRP--FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQ 289 (358)
Q Consensus 212 ~~~~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~ 289 (358)
.+.++|+++ ++++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+++....... ..+
T Consensus 162 -----~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~---------~~d 227 (503)
T 1me8_A 162 -----KVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE---------LVD 227 (503)
T ss_dssp -----------------------------------------------------------------CCC---------CBC
T ss_pred -----cHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc---------hhc
Confidence 355568877 9999999999999999999999999999999999999999999986542211 011
Q ss_pred HHhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEE
Q 018309 290 ALQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEG 344 (358)
Q Consensus 290 ~l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liG 344 (358)
.. .. ++ ....++. ....+.++.|.+.+++.+. ++..+|...|
T Consensus 228 ~~-------~~--l~--v~a~v~~-~~~~e~~~~l~e~gv~~l~-Vd~~~g~~~~ 269 (503)
T 1me8_A 228 SQ-------KR--YL--VGAGINT-RDFRERVPALVEAGADVLC-IDSSDGFSEW 269 (503)
T ss_dssp TT-------SC--BC--CEEEECS-SSHHHHHHHHHHHTCSEEE-ECCSCCCSHH
T ss_pred cc-------cc--cc--cccccCc-hhHHHHHHHHHhhhccceE-EecccCcccc
Confidence 00 00 11 1123444 5566668888888998654 4422354444
No 115
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.29 E-value=2.4e-13 Score=129.75 Aligned_cols=109 Identities=19% Similarity=0.243 Sum_probs=0.0
Q ss_pred CCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcC---CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCC
Q 018309 222 NGRPFAMLRPTASLGSALALLVQADVSSIPIVDD---NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDAN 298 (358)
Q Consensus 222 m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~---~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~ 298 (358)
|..+++++.+++++.+|.++|.+++++.+||+|+ +|+++|++|.+|+... +. +.++.+
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~-------d~---~~~V~e--------- 204 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ-------DA---ETPIKS--------- 204 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc-------cc---ceEhhh---------
Confidence 4457899999999999999999999999999986 6899999999998641 11 345666
Q ss_pred CCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHH
Q 018309 299 PSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRF 354 (358)
Q Consensus 299 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~ 354 (358)
+|++++++++++.++.+|.+.|.++++..+|||| ++|+++|+||+.|+++.
T Consensus 205 ----vMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd-~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 205 ----VMTTEVVTGSSPITLEKANSLLRETKKGKLPIVD-SNGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------
T ss_pred ----hcccceEEecCCCCHHHHHHHHHHccccceeEEc-cCCcEEEEEEechhhhh
Confidence 8888999999999999999999999999999999 58999999999999875
No 116
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.29 E-value=1.4e-12 Score=130.99 Aligned_cols=136 Identities=12% Similarity=0.060 Sum_probs=99.0
Q ss_pred CCCCC--CCceEeCCCCCHHHHHHHHh-hCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCc------
Q 018309 129 GRPCP--RPLVQAGPYDSLKEVALKIL-QNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSL------ 199 (358)
Q Consensus 129 ~~~~~--~~~v~v~~~~sl~~al~~m~-~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~------ 199 (358)
+++|. ++++++++++++.++.+.|. +++.+++||+|+ +| +++|+++.+|+.+.+...........
T Consensus 456 ~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~---~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 456 REIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA---NG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp HHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT---TC---BBCCEESHHHHTTTTTTC--------------
T ss_pred HHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec---CC---eEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 45777 88999999999999999999 899999999975 45 89999999999986643321100000
Q ss_pred -----ccccccccccc-----------------cccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCC
Q 018309 200 -----PILQQPVSSIQ-----------------LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND 257 (358)
Q Consensus 200 -----~~~~~~v~~l~-----------------i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g 257 (358)
..+.+.++.+. .-....++.++|+++++++++++++.++++.|.+++++.+||+ ++|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERG 608 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETT
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECC
Confidence 00000011100 0011124788999999999999999999999999999999999 789
Q ss_pred cEEEEEeHHHHHHH
Q 018309 258 SLLDIYSRSDITAL 271 (358)
Q Consensus 258 ~liGiis~~dl~~~ 271 (358)
+++|+||++|+++.
T Consensus 609 ~lvGIVT~~Dll~~ 622 (632)
T 3org_A 609 KLVGIVEREDVAYG 622 (632)
T ss_dssp EEEEEEEGGGTEEC
T ss_pred EEEEEEehhhHHHH
Confidence 99999999999764
No 117
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.25 E-value=3e-12 Score=124.57 Aligned_cols=112 Identities=15% Similarity=0.169 Sum_probs=83.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
+|..+++++++++++.+|+++|.+++++++||+|+ ++ +++|++|.+|+.. . .....
T Consensus 94 ~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~---~~---~lvGiVt~rDL~~------~------~~~~~------ 149 (496)
T 4fxs_A 94 GVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTE---NN---ELVGIITGRDVRF------V------TDLTK------ 149 (496)
T ss_dssp --CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS---SS---BEEEEEEHHHHTT------C------CCTTS------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEcc---CC---EEEEEEEHHHHhh------c------ccCCC------
Confidence 57789999999999999999999999999999975 35 8999999999852 0 01122
Q ss_pred cccccccccccCC-C-CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 211 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 211 i~~~~~~v~~~m~-~-~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
.+.++|+ . +++++++++++.+++++|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 150 ------~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 150 ------SVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp ------BGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred ------cHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 3455577 3 588999999999999999999999999999999999999999999854
No 118
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.22 E-value=1.4e-12 Score=124.48 Aligned_cols=113 Identities=20% Similarity=0.230 Sum_probs=0.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccccc
Q 018309 132 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 211 (358)
Q Consensus 132 ~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~i 211 (358)
+-..++++.|+.++.+|+++|.+++++.+||+++...+| +++|++|.+|+.. - . ...
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~rf-~-----d-------~~~------- 200 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQF-Q-----D-------AET------- 200 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCC---EEEEEEecccccc-c-----c-------cce-------
Confidence 556789999999999999999999999999997533345 8999999999732 0 0 122
Q ss_pred ccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 212 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 212 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
.+.++|+++++++.++.++.+|.++|.++++..+||||++|+++|+||++|+.+..
T Consensus 201 -----~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 201 -----PIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -------------------------------------------------------------
T ss_pred -----EhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 35556999999999999999999999999999999999999999999999998743
No 119
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.20 E-value=7e-12 Score=121.93 Aligned_cols=112 Identities=17% Similarity=0.206 Sum_probs=0.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
+|..+++++++++++.+|+++|.+++++++||+| ++ +++|++|.+|+... .....
T Consensus 93 ~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g---~lvGIVt~rDl~~~------------~~~~~------ 147 (490)
T 4avf_A 93 AIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE----QG---ELVGIVTGRDLRVK------------PNAGD------ 147 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEhHHhhhc------------cccCC------
Confidence 5778899999999999999999999999999996 24 79999999998531 00122
Q ss_pred cccccccccccCC-C-CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 211 LGTWVPRIGEANG-R-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 211 i~~~~~~v~~~m~-~-~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
.+.++|+ . +++++.+++++.+++++|.+++++.+||+|++|+++|+||.+|+++...
T Consensus 148 ------~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 148 ------TVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -----------------------------------------------------------------
T ss_pred ------cHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 3455588 4 6899999999999999999999999999999999999999999998653
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.20 E-value=4.8e-12 Score=123.78 Aligned_cols=113 Identities=19% Similarity=0.285 Sum_probs=4.6
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
+|.++++++.+++++.+|++.|.+++++.+||+|+ +| +++|++|..|+.+. . ...
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~lvGivt~~Dl~~~------~------~~~------- 154 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE---EG---RLVGLLTNRDVRFE------K------NLS------- 154 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC---CC---EEEEEEEHHHHHhh------c------CCC-------
Confidence 67889999999999999999999999999999975 35 89999999999751 0 011
Q ss_pred cccccccccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Q 018309 211 LGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 273 (358)
Q Consensus 211 i~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~ 273 (358)
..+.++|++ +++++.+++++.++++.|.+++++.+||+|++|+++|++|..|+++...
T Consensus 155 -----~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 155 -----KKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp -----------------------------------------------------------CHHHHT
T ss_pred -----CcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 235566887 8999999999999999999999999999999999999999999998764
No 121
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.19 E-value=1.8e-12 Score=126.27 Aligned_cols=109 Identities=17% Similarity=0.332 Sum_probs=0.0
Q ss_pred cCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCC
Q 018309 221 ANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPS 300 (358)
Q Consensus 221 ~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~ 300 (358)
.|..+++++.+++++.++++.|.+++++++||+|+ ++++|+++.+|++. . .+.++.+
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~---~--------~~~~v~~----------- 154 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA---R--------EGKLVKE----------- 154 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc---C--------CCCCHHH-----------
Confidence 46678899999999999999999999999999997 99999999999875 1 1345565
Q ss_pred cccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 018309 301 LGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 355 (358)
Q Consensus 301 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~ 355 (358)
+|.++++++++++++.++++.|.+++++.+|||| ++|+++|+||..||++.+
T Consensus 155 --im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd-e~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 155 --LMTKEVITVPESIEVEEALKIMIENRIDRLPVVD-ERGKLVGLITMSDLVARK 206 (486)
T ss_dssp -------------------------------------------------------
T ss_pred --HccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEe-cCCeEEEEEEHHHHHHhh
Confidence 6777889999999999999999999999999999 589999999999999875
No 122
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.19 E-value=1.8e-13 Score=134.52 Aligned_cols=117 Identities=20% Similarity=0.233 Sum_probs=68.1
Q ss_pred ccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcC---CCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcC
Q 018309 218 IGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDD---NDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLG 294 (358)
Q Consensus 218 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~---~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~ 294 (358)
+.++|.++++++.+++++.+|+++|.+++++.+||+|+ +|+++|+||.+|+...... ..+.++.+
T Consensus 110 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~-------~~~~~v~~----- 177 (514)
T 1jcn_A 110 FEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK-------DHTTLLSE----- 177 (514)
T ss_dssp CCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-------------------------
T ss_pred hhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc-------cCCCCHHH-----
Confidence 44557778899999999999999999999999999997 5899999999998763210 01345555
Q ss_pred CCCCCCcccCCc--cceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHh
Q 018309 295 QDANPSLGFNGQ--RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFL 355 (358)
Q Consensus 295 ~~~~~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~ 355 (358)
+|.+ +++++++++++.++++.|.+++++++|||| ++|+++|+||+.|+++.+
T Consensus 178 --------vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd-~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 178 --------VMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVN-DCDELVAIIARTDLKKNR 231 (514)
T ss_dssp -----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEES-SSSCCC----CCCCSSCC
T ss_pred --------HhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEEC-CCCeEEEEEEHHHHHHHh
Confidence 6766 899999999999999999999999999999 589999999999998764
No 123
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.07 E-value=2.3e-10 Score=80.74 Aligned_cols=69 Identities=13% Similarity=0.241 Sum_probs=54.5
Q ss_pred ceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHHHhcCCCCCCCcccCC
Q 018309 226 FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQALQLGQDANPSLGFNG 305 (358)
Q Consensus 226 ~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~ 305 (358)
++++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++.+..... ...+.++++ +|+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~---~~~~~~V~~-------------iMt 64 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGK---NPKEVKVEE-------------IMT 64 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTC---CGGGCBGGG-------------TCE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCC---CcccCCHHH-------------hcC
Confidence 57899999999999999999999999997 5899999999999864432221 112456666 787
Q ss_pred ccceEE
Q 018309 306 QRCQMC 311 (358)
Q Consensus 306 ~~~~~v 311 (358)
++++|+
T Consensus 65 ~~~iTV 70 (70)
T 3ghd_A 65 KNPVKI 70 (70)
T ss_dssp ECTTCC
T ss_pred CCCeEC
Confidence 777653
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.99 E-value=6.3e-11 Score=115.46 Aligned_cols=161 Identities=15% Similarity=0.252 Sum_probs=22.7
Q ss_pred CCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCcccccccccccc
Q 018309 131 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 210 (358)
Q Consensus 131 ~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l~ 210 (358)
.|..+++++++++++.++++.|.+++.+++||+++ + +++|+++.+|++. . ...
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~----~---~lvGivt~~Dl~~------~--------~~~------ 150 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED----E---KVVGIITKKDIAA------R--------EGK------ 150 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC----C---EEEEEEEHHHhcc------C--------CCC------
Confidence 57788999999999999999999999999999963 3 7999999999864 0 112
Q ss_pred cccccccccccCCCCceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhcccccccccccccHHHH
Q 018309 211 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQA 290 (358)
Q Consensus 211 i~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~~~~~~l~~~~~~v~~~ 290 (358)
.+.++|.++++++++++++.++++.|.+++++.+||+|++|+++|++|.+|+++...... ...+
T Consensus 151 ------~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~~~~---------~~~~- 214 (486)
T 2cu0_A 151 ------LVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYKN---------AVRD- 214 (486)
T ss_dssp --------------------------------------------------------------CCTT---------CCBC-
T ss_pred ------CHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhhccc---------cccc-
Confidence 344558878899999999999999999999999999999999999999999998643110 0000
Q ss_pred HhcCCCCCCCcccCCccceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEe
Q 018309 291 LQLGQDANPSLGFNGQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIIS 347 (358)
Q Consensus 291 l~~~~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis 347 (358)
.... ++.. ..+..++ .+.+..+...++..+ |++...|...++++
T Consensus 215 ------~~g~--~~v~--~~~~~~~--~~~a~~l~~~gvd~l-vvdta~G~~~~~L~ 258 (486)
T 2cu0_A 215 ------ENGE--LLVA--AAVSPFD--IKRAIELDKAGVDVI-VVDTAHAHNLKAIK 258 (486)
T ss_dssp ------TTSC--BCCE--EEECTTC--HHHHHHHHHTTCSEE-EEECSCCCCHHHHH
T ss_pred ------cCCc--eeec--ceechhh--HHHHHHHHHhcCCce-EEEecCCcEeehhh
Confidence 0001 1111 1233333 566778899999876 66633455544443
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.97 E-value=1.6e-11 Score=120.59 Aligned_cols=118 Identities=17% Similarity=0.207 Sum_probs=67.1
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHhhCCcceEEEEecCCCCCCcceEEEeechHhHHHHHHhhcccCCCCccccccccccc
Q 018309 130 RPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 209 (358)
Q Consensus 130 ~~~~~~~v~v~~~~sl~~al~~m~~~~~~~lpV~d~~~~~g~~~~~vgilt~~di~~~l~~~~~~~~~~~~~~~~~v~~l 209 (358)
.+|.++++++.+++++.+|+++|.+++++.+||+|++..+| +++|++|.+|+..... ....
T Consensus 112 ~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~---~lvGiVt~~Dl~~~~~----------~~~~------ 172 (514)
T 1jcn_A 112 QGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGS---KLVGIVTSRDIDFLAE----------KDHT------ 172 (514)
T ss_dssp TTSCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC------------------------
T ss_pred hccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCC---EEEEEEEHHHHHhhhh----------ccCC------
Confidence 36778899999999999999999999999999996411124 8999999999865210 0011
Q ss_pred ccccccccccccCCC--CceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q 018309 210 QLGTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 272 (358)
Q Consensus 210 ~i~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~ 272 (358)
..+.++|.+ +++++.+++++.+++++|.+++++.+||+|++|+++|++|++|+++.+
T Consensus 173 ------~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 173 ------TLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp --------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred ------CCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 235566887 899999999999999999999999999999999999999999988744
No 126
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.83 E-value=6.5e-09 Score=72.93 Aligned_cols=48 Identities=15% Similarity=0.311 Sum_probs=44.4
Q ss_pred ceEecCCCCHHHHHHHHHhCCCCEEEEEcCCCcEEEEEeHHHHHHHHhc
Q 018309 226 FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 274 (358)
Q Consensus 226 ~~~v~~~~~l~~a~~~m~~~~~~~vpVvd~~g~liGiis~~dl~~~~~~ 274 (358)
+.++.+++++.+|++.|.+++++++||+|+ |+++|++|.+|+++.+..
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 678999999999999999999999999997 999999999999987643
No 127
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.76 E-value=2.3e-08 Score=70.30 Aligned_cols=47 Identities=15% Similarity=0.318 Sum_probs=43.7
Q ss_pred ceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 308 CQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 308 ~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
++++++++++.+|++.|.+++++++||+|+ |+++|++|.+|+++.++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 689999999999999999999999999993 89999999999998654
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.61 E-value=1.1e-07 Score=66.49 Aligned_cols=48 Identities=17% Similarity=0.372 Sum_probs=44.6
Q ss_pred cceEEcCCCCHHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHHHhh
Q 018309 307 RCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFRFLL 356 (358)
Q Consensus 307 ~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~~~~ 356 (358)
+++++++++++.+|++.|.+++++++||+| + |+++|+||..|+++++.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d-~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME-G-DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 367899999999999999999999999999 4 99999999999999864
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=57.90 E-value=19 Score=24.90 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCcEEEEEeHHHHHHHHhcc
Q 018309 246 DVSSIPIVDDNDSLLDIYSRSDITALAKDK 275 (358)
Q Consensus 246 ~~~~vpVvd~~g~liGiis~~dl~~~~~~~ 275 (358)
+...+=++|++|+.+|+++..+.+.+..+.
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~A~e~ 41 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEIAARR 41 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHHHHHT
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHHHHHc
Confidence 345677899999999999999999876543
No 130
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=39.22 E-value=46 Score=22.97 Aligned_cols=25 Identities=16% Similarity=0.306 Sum_probs=20.7
Q ss_pred CCEEEEEeCCCCeEEEEEehHHHHHH
Q 018309 329 VRRLVIVEAGSKRVEGIISLSDVFRF 354 (358)
Q Consensus 329 ~~~l~Vvd~~~~~liGvis~~Dil~~ 354 (358)
...+-++| ++|..+|+++..+-++.
T Consensus 13 ~~eVrli~-~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 13 AREVRLID-QNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CSEEEEEC-TTSCEEEEEEHHHHHHH
T ss_pred CCEEEEEC-CCCcCCCcccHHHHHHH
Confidence 34577899 58999999999998875
No 131
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=27.32 E-value=44 Score=25.06 Aligned_cols=17 Identities=29% Similarity=0.419 Sum_probs=13.8
Q ss_pred EEEEEcCCCcEEEEEeH
Q 018309 249 SIPIVDDNDSLLDIYSR 265 (358)
Q Consensus 249 ~vpVvd~~g~liGiis~ 265 (358)
..||.|++|+++|+++.
T Consensus 105 ~~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 105 KSPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEEECTTCCEEEEEEE
T ss_pred EEeEECCCCCEEEEEEE
Confidence 35898878999999863
No 132
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=27.28 E-value=27 Score=27.62 Aligned_cols=35 Identities=34% Similarity=0.672 Sum_probs=28.8
Q ss_pred HHHHHHHHhcCCCCEEEEEeCCCCeEEEEEehHHHHH
Q 018309 317 LHKVMERLANPGVRRLVIVEAGSKRVEGIISLSDVFR 353 (358)
Q Consensus 317 l~~a~~~m~~~~~~~l~Vvd~~~~~liGvis~~Dil~ 353 (358)
+.+.++.+.+.+-.-++|-. +|+++|+|.+.|.+|
T Consensus 121 ~~~~~~~la~~G~T~v~VA~--d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE--GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE--TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE--CCEEEEEEEEecCCC
Confidence 67778888888888888877 389999999988654
No 133
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=26.24 E-value=45 Score=25.44 Aligned_cols=18 Identities=22% Similarity=0.394 Sum_probs=14.4
Q ss_pred EEEEEcCCCcEEEEEeHH
Q 018309 249 SIPIVDDNDSLLDIYSRS 266 (358)
Q Consensus 249 ~vpVvd~~g~liGiis~~ 266 (358)
..||.|++|+++|+++..
T Consensus 110 ~~PV~~~~g~viGvv~vg 127 (142)
T 3by8_A 110 FTPIYDENHKQIGVVAIG 127 (142)
T ss_dssp EEEEECTTSCEEEEEEEE
T ss_pred EEeEEcCCCCEEEEEEEe
Confidence 358988789999998753
No 134
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=20.67 E-value=43 Score=27.89 Aligned_cols=26 Identities=15% Similarity=0.323 Sum_probs=19.4
Q ss_pred CCCCEEEEEcCCCcEEEEEeHHHHHH
Q 018309 245 ADVSSIPIVDDNDSLLDIYSRSDITA 270 (358)
Q Consensus 245 ~~~~~vpVvd~~g~liGiis~~dl~~ 270 (358)
-+-|.=||+|.+|+++|+-+..|=..
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCCccCCCCCcEEEEEeccCCcc
Confidence 47888899999999999999998665
Done!