Query 018315
Match_columns 358
No_of_seqs 84 out of 86
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 13:19:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018315.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018315hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lul_A Tyrosine-protein kinase 94.7 0.53 1.8E-05 39.6 12.3 98 241-348 17-122 (164)
2 1x1g_A Pleckstrin 2; PH domain 94.7 0.33 1.1E-05 37.8 10.1 101 240-346 19-123 (129)
3 2rlo_A Centaurin-gamma 1; spli 94.6 0.26 8.9E-06 39.1 9.5 40 310-349 87-126 (128)
4 1mai_A Phospholipase C delta-1 94.1 0.23 7.8E-06 40.8 8.5 107 235-349 9-123 (131)
5 1wg7_A Dedicator of cytokinesi 93.4 0.39 1.3E-05 38.6 8.6 98 239-350 18-127 (150)
6 3aj4_A Pleckstrin homology dom 93.2 1.1 3.7E-05 34.1 10.3 99 241-346 7-110 (112)
7 2dn6_A KIAA0640 protein; PH do 92.6 1.7 5.7E-05 32.8 10.6 96 240-351 9-107 (115)
8 2cod_A Centaurin-delta 1; ARF 92.3 1.3 4.3E-05 33.9 9.7 86 241-346 10-98 (115)
9 4h8s_A DCC-interacting protein 92.2 0.57 2E-05 44.4 9.2 94 239-346 301-397 (407)
10 2q13_A DCC-interacting protein 92.1 0.42 1.4E-05 45.0 8.1 93 240-346 279-374 (385)
11 2dkp_A Pleckstrin homology dom 91.9 1.6 5.3E-05 33.7 9.8 94 240-346 22-118 (128)
12 2d9y_A Pleckstrin homology dom 91.7 1.6 5.4E-05 33.0 9.6 94 240-346 12-108 (117)
13 1u5d_A SKAP55, SRC kinase-asso 91.1 1.9 6.5E-05 31.8 9.3 95 241-347 5-105 (108)
14 1fao_A Dual adaptor of phospho 90.3 2.8 9.6E-05 32.4 10.0 92 240-348 19-113 (126)
15 2yry_A Pleckstrin homology dom 90.3 2.1 7E-05 32.8 9.1 97 240-346 23-119 (122)
16 2dhk_A TBC1 domain family memb 90.1 2.5 8.6E-05 32.9 9.6 90 241-346 10-103 (119)
17 3p6a_A RHO guanine nucleotide 90.1 1.5 5E-05 40.5 9.5 38 310-347 332-371 (377)
18 2i5f_A Pleckstrin; PH domain, 89.9 3.6 0.00012 30.7 9.9 96 241-345 9-107 (109)
19 1v5u_A SBF1, SET binding facto 89.4 3.4 0.00012 31.2 9.6 97 241-346 10-110 (117)
20 2d9v_A Pleckstrin homology dom 89.4 5.9 0.0002 31.4 11.4 99 240-346 9-113 (130)
21 1u5f_A SRC-associated adaptor 88.7 2.9 0.0001 33.6 9.2 96 240-347 18-119 (148)
22 1upq_A PEPP1; PH domain, phosp 88.3 5.3 0.00018 30.5 10.0 97 240-349 12-111 (123)
23 2d9x_A Oxysterol binding prote 88.2 2.6 8.9E-05 32.7 8.4 100 241-352 10-109 (120)
24 1eaz_A Tandem PH domain contai 88.0 1.9 6.4E-05 33.0 7.3 37 311-348 76-112 (125)
25 1wgq_A FYVE, rhogef and PH dom 87.9 3.9 0.00013 30.9 9.0 34 312-345 68-101 (109)
26 2lg1_A A-kinase anchor protein 87.2 2.6 8.8E-05 36.8 8.6 39 310-348 133-173 (185)
27 3mpx_A FYVE, rhogef and PH dom 87.2 2.1 7.1E-05 40.4 8.5 94 241-349 246-339 (434)
28 2da0_A 130-kDa phosphatidylino 86.8 5.5 0.00019 30.6 9.4 94 240-350 11-104 (114)
29 1pls_A Pleckstrin homology dom 86.7 6.9 0.00024 29.5 9.8 39 310-348 64-102 (113)
30 1btk_A Bruton'S tyrosine kinas 86.1 7.6 0.00026 32.9 10.8 106 241-347 5-132 (169)
31 1x05_A Pleckstrin; PH domain, 85.8 11 0.00036 29.2 10.8 99 240-347 19-120 (129)
32 2rsg_A Collagen type IV alpha- 85.7 0.92 3.2E-05 33.6 4.3 34 310-344 58-91 (94)
33 1wjm_A Beta-spectrin III; PH d 83.5 6.4 0.00022 30.5 8.4 38 310-347 80-117 (123)
34 3odw_A RHO guanine nucleotide 83.0 7 0.00024 38.9 10.5 38 310-347 485-524 (536)
35 2cof_A Protein KIAA1914; PH do 82.3 5.4 0.00018 30.2 7.5 36 310-345 64-99 (107)
36 1btn_A Beta-spectrin; signal t 82.1 9.6 0.00033 28.1 8.6 34 311-344 72-105 (106)
37 1x1f_A Signal-transducing adap 81.7 15 0.00051 31.0 10.6 35 312-347 79-113 (149)
38 2j59_M RHO-GTPase activating p 80.9 7.1 0.00024 31.9 8.2 35 311-346 76-110 (168)
39 1zc3_B Exocyst complex protein 79.3 23 0.00079 28.5 11.1 100 237-346 7-106 (113)
40 1u5e_A SRC-associated adaptor 78.8 7.8 0.00027 34.0 8.3 97 239-347 106-208 (211)
41 4a6h_A Phosphatidylinositol 4, 78.5 16 0.00056 29.5 9.6 100 240-347 7-118 (120)
42 3rcp_A Pleckstrin homology dom 78.4 2.6 8.9E-05 31.4 4.4 35 311-345 57-91 (103)
43 1v5p_A Pleckstrin homology dom 78.2 13 0.00045 30.0 8.9 96 241-347 17-120 (126)
44 3tfm_A Myosin X; split PH doma 76.8 3.8 0.00013 36.1 5.7 36 311-347 120-155 (228)
45 3t06_A PDZ-rhogef, RHO guanine 76.3 16 0.00056 34.2 10.2 39 310-348 368-409 (418)
46 1dro_A Beta-spectrin; cytoskel 76.2 4.2 0.00014 31.8 5.2 37 310-346 82-118 (122)
47 2p0d_A RHO GTPase-activating p 74.5 18 0.00063 28.8 8.7 39 310-348 87-125 (129)
48 3lju_X ARF-GAP with dual PH do 73.9 12 0.00041 36.0 8.7 99 241-347 271-372 (386)
49 1fgy_A GRP1; PH domain, signal 72.6 28 0.00097 26.3 9.9 25 323-347 96-120 (127)
50 1v89_A Hypothetical protein KI 71.5 29 0.00098 25.8 10.4 94 240-347 9-112 (118)
51 1dbh_A Protein (human SOS 1); 69.9 15 0.00053 33.6 8.2 35 312-346 314-348 (354)
52 1unq_A RAC-alpha serine/threon 69.8 29 0.001 26.5 8.6 40 311-350 71-113 (125)
53 3cxb_B Pleckstrin homology dom 68.0 40 0.0014 26.1 9.6 37 310-346 64-100 (112)
54 3ohm_B 1-phosphatidylinositol- 66.7 14 0.00049 39.8 8.2 103 234-347 16-139 (885)
55 1kz7_A Guanine nucleotide exch 65.4 59 0.002 30.0 11.2 38 312-349 289-327 (353)
56 1txd_A RHO guanine nucleotide 64.9 48 0.0016 30.7 10.5 40 311-350 331-372 (385)
57 3qwm_A Iqsec1, IQ motif and SE 64.4 20 0.00068 31.0 7.2 94 246-350 26-125 (140)
58 2k8e_A UPF0339 protein YEGP; p 62.1 9.7 0.00033 32.4 4.8 93 246-349 23-117 (130)
59 3pp2_A RHO GTPase-activating p 61.5 9 0.00031 30.4 4.3 37 310-346 86-122 (124)
60 2zkm_X 1-phosphatidylinositol- 61.3 43 0.0015 35.5 10.5 106 234-348 12-136 (799)
61 1xcg_A PDZ-rhogef, RHO guanine 60.6 33 0.0011 31.4 8.5 37 311-347 327-366 (368)
62 3a8p_A T-lymphoma invasion and 59.8 63 0.0022 29.4 10.1 40 310-349 87-126 (263)
63 2w2x_D 1-phosphatidylinositol- 59.6 20 0.0007 28.3 6.1 40 311-350 81-122 (124)
64 2lxb_A Small glutamine-rich te 57.2 7.4 0.00025 30.7 3.0 35 128-164 37-72 (74)
65 4ebb_A Dipeptidyl peptidase 2; 56.7 1.1 3.8E-05 43.9 -2.2 67 4-76 393-459 (472)
66 3qr0_A Phospholipase C-beta (P 55.6 31 0.0011 36.9 8.3 109 234-347 17-142 (816)
67 1w1g_A HPDK1, 3-phosphoinositi 52.4 76 0.0026 27.7 8.9 35 312-348 106-140 (151)
68 2vrw_B P95VAV, VAV1, proto-onc 51.9 1.3E+02 0.0043 28.1 11.0 37 313-349 300-337 (406)
69 4asv_A Small glutamine-rich te 50.1 8 0.00027 31.7 2.2 34 128-163 49-83 (92)
70 2k49_A UPF0339 protein SO_3888 48.7 14 0.00048 30.9 3.6 93 246-349 7-101 (118)
71 1nty_A Triple functional domai 47.6 1E+02 0.0035 27.7 9.4 37 312-348 269-309 (311)
72 3ksy_A SOS-1, SON of sevenless 46.1 50 0.0017 35.7 8.2 104 235-349 441-548 (1049)
73 2r09_A Cytohesin-3; autoinhibi 46.1 1.5E+02 0.0053 27.6 10.6 24 323-346 304-327 (347)
74 1v61_A RAC/CDC42 guanine nucle 46.0 25 0.00086 29.6 4.7 101 237-349 27-128 (132)
75 2y7b_A Actin-binding protein a 44.1 1.1E+02 0.0036 23.5 8.9 25 324-348 105-129 (134)
76 1qqg_A IRS-1, insulin receptor 43.7 63 0.0022 29.4 7.4 38 310-348 76-113 (264)
77 1v88_A Oxysterol binding prote 42.8 44 0.0015 27.1 5.6 23 325-347 102-124 (130)
78 2pz1_A RHO guanine nucleotide 36.6 2.8E+02 0.0097 26.3 11.5 37 312-348 404-441 (466)
79 2rgn_B RHOA/RAC/CDC42 exchange 36.3 1.1E+02 0.0037 28.3 7.8 37 312-348 279-319 (354)
80 3tfm_A Myosin X; split PH doma 35.0 28 0.00096 30.5 3.5 33 311-344 194-226 (228)
81 2coc_A FYVE, rhogef and PH dom 34.5 57 0.002 26.0 5.0 35 310-345 70-104 (112)
82 2dfk_A Collybistin II; DH doma 33.3 3.1E+02 0.011 25.7 10.7 36 313-348 328-364 (402)
83 3ky9_A Proto-oncogene VAV; cal 32.4 2.6E+02 0.0088 27.8 10.3 37 313-349 472-509 (587)
84 2dtc_A RAL guanine nucleotide 29.9 59 0.002 27.1 4.5 83 255-344 23-109 (126)
85 2rov_A RHO-associated protein 29.5 2.1E+02 0.0073 22.7 8.9 96 242-345 4-113 (117)
86 2l1q_A Liver-expressed antimic 29.3 12 0.00041 26.7 0.1 18 1-18 1-22 (40)
87 2z0q_A XPLN, RHO guanine nucle 29.1 3E+02 0.01 24.9 9.4 35 312-346 308-345 (346)
88 1v5m_A SH2 and PH domain-conta 27.2 48 0.0017 28.8 3.5 37 310-346 93-129 (136)
89 3a98_B Engulfment and cell mot 27.2 52 0.0018 29.5 3.9 36 312-347 115-150 (203)
90 3tca_A Amyloid beta A4 precurs 21.1 1.3E+02 0.0043 26.3 5.1 34 310-343 234-272 (291)
91 3hks_A EIF-5A-2, eukaryotic tr 20.6 1.1E+02 0.0037 27.0 4.5 46 239-291 34-82 (167)
92 2vlg_A Sporulation kinase A; h 20.6 1.4E+02 0.0048 22.7 4.7 33 244-276 70-108 (111)
93 2y39_A Nickel and cobalt resis 20.3 75 0.0026 26.9 3.3 41 58-98 30-75 (118)
No 1
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=94.71 E-value=0.53 Score=39.62 Aligned_cols=98 Identities=16% Similarity=0.164 Sum_probs=61.1
Q ss_pred hcceeeeecCC----CceeEEEEEEEEcCccEEEEEeecc----ccccccccccceEEEeeccCCCCCCCcccccCCCcc
Q 018315 241 RGCELLKRTRK----GDLHWKIVSVYINRLNQVMLKMKSR----HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDR 312 (358)
Q Consensus 241 rG~eLlkrtrk----G~lhwk~VSVyink~~qV~LKmKSk----Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r 312 (358)
++|-|+||... +.--||.==+.+.. ++ +.==|++ ..-|.|.-..-.+|..|..+.+.- ..+..
T Consensus 17 ~EG~L~Kr~~~kk~~~~knWKkRwFVL~~-~~-L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~-------~~~~~ 87 (164)
T 2lul_A 17 LEEILIKRSQQKKKTSPLNYKERLFVLTK-SM-LTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVI-------PCQNK 87 (164)
T ss_dssp EEEEEEEECCCCSSSCCCCEEEEEEEEES-SE-EEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSC-------CSSSC
T ss_pred EEEEEEEecCCCCCCCCCCceeEEEEEEC-CE-EEEEeccCcccccccEEEEeeeEEEEeccccccCc-------ccccc
Confidence 67899999754 22358877666643 32 2222332 233444444334444444332111 11346
Q ss_pred eeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 313 RYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 313 ~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
..|-|.|.+ +++-|.++|..+.+.|++.|+..+..
T Consensus 88 ~~f~i~t~~-rt~~l~A~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 88 YPFQVVHDA-NTLYIFAPSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp SEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred eeEEEecCC-cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 678899888 89999999999999999999988754
No 2
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=94.66 E-value=0.33 Score=37.78 Aligned_cols=101 Identities=15% Similarity=0.233 Sum_probs=59.1
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc----ccccccccccceEEEeeccCCCCCCCcccccCCCcceeE
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR----HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYF 315 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk----Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YF 315 (358)
-+.|-|+|+... .-.||.--+.+..++..+.=-++. ..-|.|.-.. +.|..|.+. ..|.. .........|
T Consensus 19 ~~~G~L~K~g~~-~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~-~~v~~~~~~--~~p~~--~~~~~~~~~F 92 (129)
T 1x1g_A 19 VKQGYLAKQGHK-RKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRG-SLVSALEDN--GVPTG--VKGNVQGNLF 92 (129)
T ss_dssp EEEEEEEEECSS-SSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTT-CCCEECCSS--SSCSS--CSSCCCSSCE
T ss_pred EEEEEEEEECCC-CCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcC-CEEEEeCCC--CCccc--ccCCCCCceE
Confidence 477889998654 456777766665333333333332 2233333221 223222221 01111 0111146789
Q ss_pred EEeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 316 GLKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 316 glkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
-|.|.++.++.|.|++..+.+.|++.|+..+
T Consensus 93 ~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 123 (129)
T 1x1g_A 93 KVITKDDTHYYIQASSKAERAEWIEAIKKLT 123 (129)
T ss_dssp EECCTTCCCEEECCSSHHHHHHHHHHHHHHS
T ss_pred EEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 9999986779999999999999999998764
No 3
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=94.56 E-value=0.26 Score=39.11 Aligned_cols=40 Identities=23% Similarity=0.296 Sum_probs=34.6
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
+...+|-|.|.+.....|.++|..+.+.|++.|+..+..+
T Consensus 87 ~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~ 126 (128)
T 2rlo_A 87 EENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILAS 126 (128)
T ss_dssp CCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 4578899999886789999999999999999999877544
No 4
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=94.09 E-value=0.23 Score=40.80 Aligned_cols=107 Identities=14% Similarity=0.208 Sum_probs=64.0
Q ss_pred hhhHhhhcceeeeecCCCceeEEEEEEEEcCccEEEEEeeccc-----cccccc-cccceEEEeeccCC-CCCCCccccc
Q 018315 235 SRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRH-----VAGTIT-KKKKNVVLEVIPDM-PAWPGRHLLE 307 (358)
Q Consensus 235 ~~~~larG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkH-----v~GAfs-KKKK~VV~dV~~~i-pAWpgr~l~e 307 (358)
....|.+|+.|+|-++++.- |.--+++..+++++-. .|+- ..+.|. ..-+.|..|-..+. -.++ +
T Consensus 9 ~l~~L~~Gt~l~K~~~~~~~--k~r~f~l~~~~~~~w~-~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~-----~ 80 (131)
T 1mai_A 9 DLQALLKGSQLLKVKSSSWR--RERFYKLQEDCKTIWQ-ESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFA-----R 80 (131)
T ss_dssp HHHHHHHCEEEEEESSSSCE--EEEEEEECTTSSEEEE-CCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHC-----T
T ss_pred HHHHHHcCCeEEEECCCCcc--eeEEEEECCCCCEEEe-CCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhh-----h
Confidence 35688999999999988743 4445567777888744 2211 111111 11234444432111 0011 1
Q ss_pred CCCcceeEEEeecc-cceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 308 GGEDRRYFGLKTVL-RGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 308 ~~e~r~YFglkTa~-~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
..++.++|=|--.. ...+-|-|.|..+.+.|++|+..|+...
T Consensus 81 ~~~~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 81 DIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp TSCGGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred cCCccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 11356788554444 3689999999999999999999998543
No 5
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=93.40 E-value=0.39 Score=38.64 Aligned_cols=98 Identities=15% Similarity=0.128 Sum_probs=61.3
Q ss_pred hhhcceeeeecCCCc-----eeEEEEEEEEcCc--cE-EEEEeeccc----cccccccccceEEEeeccCCCCCCCcccc
Q 018315 239 LARGCELLKRTRKGD-----LHWKIVSVYINRL--NQ-VMLKMKSRH----VAGTITKKKKNVVLEVIPDMPAWPGRHLL 306 (358)
Q Consensus 239 larG~eLlkrtrkG~-----lhwk~VSVyink~--~q-V~LKmKSkH----v~GAfsKKKK~VV~dV~~~ipAWpgr~l~ 306 (358)
+-+.|-|+|+.++|. -.||.--+.+... |. .++=-|+.. .-|.|.-.. |..++.
T Consensus 18 ~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~-------~~~~~~------- 83 (150)
T 1wg7_A 18 ITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDS-------CMGVVQ------- 83 (150)
T ss_dssp CCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTT-------CCEECC-------
T ss_pred eeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEeccc-------CEEEec-------
Confidence 357889999987642 3577766666432 21 333334332 223332222 111111
Q ss_pred cCCCcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHHHH
Q 018315 307 EGGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAA 350 (358)
Q Consensus 307 e~~e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~~~ 350 (358)
+.......|-|.|.+...+.|.|++..+.+.|++.|+..+....
T Consensus 84 ~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~ 127 (150)
T 1wg7_A 84 NNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNF 127 (150)
T ss_dssp CCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence 01135678999998767999999999999999999999886554
No 6
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=93.17 E-value=1.1 Score=34.07 Aligned_cols=99 Identities=8% Similarity=0.073 Sum_probs=57.6
Q ss_pred hcceeeeecCCCceeEEEEEEEEcCccEEEEEeec---cccccccccccceEEEeeccCCCC--CCCcccccCCCcceeE
Q 018315 241 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKS---RHVAGTITKKKKNVVLEVIPDMPA--WPGRHLLEGGEDRRYF 315 (358)
Q Consensus 241 rG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKS---kHv~GAfsKKKK~VV~dV~~~ipA--Wpgr~l~e~~e~r~YF 315 (358)
+.|-|.|+.. +.-.||.--+.+.+.+++..= |+ ....|.|.-...+|-+.-..++.. .|. .......|
T Consensus 7 ~~G~L~K~g~-~~k~WkkR~fvL~~~~~L~yy-k~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~-----~~~~~~~F 79 (112)
T 3aj4_A 7 KSGWLLRQST-ILKRWKKNWFDLWSDGHLIYY-DDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPD-----GKSKDCML 79 (112)
T ss_dssp EEEEEEEECS-SSCCEEEEEEEECTTSEEEEE-SSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCST-----TCCGGGEE
T ss_pred EEEEEEeeCC-CCCCeeceEEEEeeCCEEEEE-cCCCCCCCCccccccccceeecccccccccCCCC-----CCCcCcEE
Confidence 5677888755 334688777777444443322 22 223344433333332221111111 111 11235689
Q ss_pred EEeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 316 GLKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 316 glkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
-|.|...+...|.|+|..+.+.|++.|+...
T Consensus 80 ~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 80 QIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp EEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 9998766899999999999999999998653
No 7
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.59 E-value=1.7 Score=32.84 Aligned_cols=96 Identities=13% Similarity=0.179 Sum_probs=58.9
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeec---cccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKS---RHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKS---kHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
-+.|-|.|+.. ..-.||.--+.+.. +.+ .=-++ ...-|.|.-..-+.|..+.+. ......|-
T Consensus 9 ~~~G~L~K~~~-~~~~Wk~R~fvL~~-~~L-~yy~~~~~~~~~g~i~L~~~~~v~~~~~~------------~~~~~~F~ 73 (115)
T 2dn6_A 9 LKQGYMMKKGH-RRKNWTERWFVLKP-NII-SYYVSEDLKDKKGDILLDENCCVESLPDK------------DGKKCLFL 73 (115)
T ss_dssp SEEEEEEEECT-TSSCEEEEEEEECS-SCE-EEESSTTCSSEEEEECCCTTCEEEEECCC------------TTCCSEEE
T ss_pred eEEEEEEecCC-CCCCcEEeEEEEEC-CEE-EEeCCCCCcccCcEEEecCcEEEEECCCC------------CCCeeEEE
Confidence 36678888765 33457777666643 222 11222 223344433333333322111 12457899
Q ss_pred EeecccceEEEEeCCchhHhhHHHHHHHHHHHHHH
Q 018315 317 LKTVLRGVVEFECRSQREYDIWTQGVARLLNVAAE 351 (358)
Q Consensus 317 lkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~~~~ 351 (358)
|.|.. +.+.|.|++..+.+.|++.|+..+....+
T Consensus 74 i~~~~-r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 107 (115)
T 2dn6_A 74 VKCFD-KTFEISASDKKKKQEWIQAIHSTIHLLKL 107 (115)
T ss_dssp EECSS-CEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCC-CEEEEEcCCHHHHHHHHHHHHHHHHHHhc
Confidence 98887 88999999999999999999998866544
No 8
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=92.26 E-value=1.3 Score=33.92 Aligned_cols=86 Identities=15% Similarity=0.125 Sum_probs=54.8
Q ss_pred hcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEEE
Q 018315 241 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 317 (358)
Q Consensus 241 rG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFgl 317 (358)
+.|-|.|+.+++.-.||.--+.+.. +. +.=-|++ ..-|.|.-..-..|.. .+...|-|
T Consensus 10 ~~G~L~K~~~~~~~~WkkR~fvL~~-~~-L~yy~~~~~~~~~g~i~l~~~~~v~~-----------------~~~~~F~i 70 (115)
T 2cod_A 10 KSGWLDKLSPQGKRMFQKRWVKFDG-LS-ISYYNNEKEMYSKGIIPLSAISTVRV-----------------QGDNKFEV 70 (115)
T ss_dssp EEEEEEECCSSSSSCCEEEEEEECS-SE-EEEEESSCCSSCCCEEETTTEEEEEE-----------------ETTTEEEE
T ss_pred EEEEEEEcCCCCCCCCceEEEEEEC-CE-EEEEcCCCCcccCCEEECCcceEEEe-----------------CCCCEEEE
Confidence 6788999887566678887777743 22 2222322 1222222211111110 12468988
Q ss_pred eecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 318 KTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 318 kTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
.|.. +.+.|.|++..+.+.|++.|+..+
T Consensus 71 ~~~~-r~~~l~a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 71 VTTQ-RTFVFRVEKEEERNDWISILLNAL 98 (115)
T ss_dssp EESS-CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EeCC-cEEEEECCCHHHHHHHHHHHHHHH
Confidence 8876 889999999999999999999876
No 9
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=92.22 E-value=0.57 Score=44.44 Aligned_cols=94 Identities=13% Similarity=0.233 Sum_probs=58.8
Q ss_pred hhhcceeeeecCCCce--eEEEEEEEEcCccEEEEEeeccccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 239 LARGCELLKRTRKGDL--HWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 239 larG~eLlkrtrkG~l--hwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
+.|.|-|+|++..|.. -|+.-=+++. +++...- ++... +..++.++..+. ....+..+.+.+|-
T Consensus 301 ~~k~G~L~k~~~~g~~~~~W~rrwfvl~-~~~l~y~-~~~~~-------~~~~~~~l~~~~-----v~~~~~~~r~~cF~ 366 (407)
T 4h8s_A 301 IQKAGYLNLRNKTGLVTTTWERLYFFTQ-GGNLMCQ-PRGAV-------AGGLIQDLDNCS-----VMAVDCEDRRYCFQ 366 (407)
T ss_dssp SCCEEEEEEEEECSSSCEEEEEEEEEEC-SSCEECC-CTTCS-------SCCCCBCSSCCE-----EEEECCTTCSSEEE
T ss_pred ceeeceeeeeccCCCCCCCceEEEEEEE-CCEEEEE-eCCCC-------CCCeEEECCceE-----EEECCCCCCCceEE
Confidence 4689999999998864 4888877774 3544322 11111 111122221110 00111224566899
Q ss_pred Eeeccc-ceEEEEeCCchhHhhHHHHHHHHH
Q 018315 317 LKTVLR-GVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 317 lkTa~~-GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
|.|.++ +++.|.++|..+.+.|.+.|++..
T Consensus 367 i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~ 397 (407)
T 4h8s_A 367 ITTPNGKSGIILQAESRKENEEWICAINNIS 397 (407)
T ss_dssp EECTTSSCCEEEECSSSHHHHHHHHHHHHHH
T ss_pred EEecCCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 999863 579999999999999999998765
No 10
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=92.13 E-value=0.42 Score=45.03 Aligned_cols=93 Identities=10% Similarity=0.182 Sum_probs=56.2
Q ss_pred hhcceeeeecCCCcee--EEEEEEEEcCccEEEEEeeccccccccccccceEEEeeccCCCCCCCcccccCCCcceeEEE
Q 018315 240 ARGCELLKRTRKGDLH--WKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 317 (358)
Q Consensus 240 arG~eLlkrtrkG~lh--wk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFgl 317 (358)
-+.|-|+|++..|..+ |+.-=+++. .++.+.- |+.. .....++++..+... ..+..+.+.+|-|
T Consensus 279 ~k~G~L~K~~~~~~~~~~WkkRwfvL~-~~~L~y~-k~~~-------~~~~~~i~l~~~~v~-----~~~~~~r~~~F~i 344 (385)
T 2q13_A 279 RKAGYLNARNKTGLVSSTWDRQFYFTQ-GGNLMSQ-ARGD-------VAGGLAMDIDNCSVM-----AVDCEDRRYCFQI 344 (385)
T ss_dssp CCEEEEEEC--------CCEEEEEEEE-TTEEEEE-CSSC-------SSCEEEEECTTCEEE-----EECCTTCSSEEEE
T ss_pred cEEEEEEEecCCCCCcCCceeEEEEEE-CCEEEEe-cCCC-------cCCCceEEccceEEE-----eccccCCCceEEE
Confidence 5889999998887555 998877775 4554321 1111 112234444332110 1112245679999
Q ss_pred eeccc-ceEEEEeCCchhHhhHHHHHHHHH
Q 018315 318 KTVLR-GVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 318 kTa~~-GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
.|.++ +...|.|+|..+.+.|++.|+..+
T Consensus 345 ~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~ 374 (385)
T 2q13_A 345 TSFDGKKSSILQAESKKDHEEWICTINNIS 374 (385)
T ss_dssp ECTTSCBCCCEECSSHHHHHHHHHHHHHHH
T ss_pred EeCCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 99884 589999999999999999998765
No 11
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=91.86 E-value=1.6 Score=33.73 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=57.4
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
-+.|-|+|+..++.-.||.--+.+. .+.+. =-|+. ..-|.|.-. .+.|..+..+ +.......|-
T Consensus 22 ~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~-yy~~~~~~~~~g~i~L~-~~~v~~~~~~----------~~~~~~~~F~ 88 (128)
T 2dkp_A 22 VRRGWLYKQDSTGMKLWKKRWFVLS-DLCLF-YYRDEKEEGILGSILLP-SFQIALLTSE----------DHINRKYAFK 88 (128)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEE-TTEEE-EESSTTCCSEEEEECGG-GSEEEECCGG----------GCCSSCSEEE
T ss_pred EEEEEEEEeCCCCCCCceeEEEEEe-CCEEE-EECCCCCcccceEEEcC-ceEEEEcCCc----------ccCCCCeEEE
Confidence 4778899988766667887766664 23222 22222 122333221 1222222111 1113456899
Q ss_pred EeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 317 LKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 317 lkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
|.|.+.+.+.|.|++..+.+.|++.|+.-.
T Consensus 89 i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 118 (128)
T 2dkp_A 89 AAHPNMRTYYFCTDTGKEMELWMKAMLDAA 118 (128)
T ss_dssp EECSSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 998876889999999999999999997643
No 12
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.73 E-value=1.6 Score=33.05 Aligned_cols=94 Identities=17% Similarity=0.210 Sum_probs=57.2
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
-+.|-|+|+.+++.-.|+.--+.+. .+.+. =-++. ..-|.|.-.. +.|..|..+ +.......|-
T Consensus 12 ~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~-yy~~~~~~~~~g~i~L~~-~~v~~~~~~----------~~~~~~~~F~ 78 (117)
T 2d9y_A 12 TKAGWLFKQASSGVKQWNKRWFVLV-DRCLF-YYKDEKEESILGSIPLLS-FRVAAVQPS----------DNISRKHTFK 78 (117)
T ss_dssp CEEEEEEEECTTSSSCEEEEEEEEE-TTEEE-EESSTTCCSCCEEEECSS-CEEEECCTT----------TTCCCSSEEE
T ss_pred eEEEEEEEeCCCCCCCceEEEEEEC-CCEEE-EECCCCCCCcCCEEEeCC-eEEEEcCcc----------ccCCCccEEE
Confidence 4678899998766678888777774 23322 22222 1222222111 112222111 1123456898
Q ss_pred EeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 317 LKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 317 lkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
|.+...+.+.|.|++..+.+.|++.|+..+
T Consensus 79 i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 79 AEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp EECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred EEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 877766899999999999999999998753
No 13
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=91.13 E-value=1.9 Score=31.79 Aligned_cols=95 Identities=21% Similarity=0.278 Sum_probs=57.3
Q ss_pred hcceeeeecCCCc---eeEEEEEEEEcCccEEEEEeeccc---cccccccccceEEEeeccCCCCCCCcccccCCCccee
Q 018315 241 RGCELLKRTRKGD---LHWKIVSVYINRLNQVMLKMKSRH---VAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRY 314 (358)
Q Consensus 241 rG~eLlkrtrkG~---lhwk~VSVyink~~qV~LKmKSkH---v~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~Y 314 (358)
+.|-|.|+.+++. -.|+.--+.+.. +. +.=-++.. .-|.|.-.. +.|.. .++ ..+.......
T Consensus 5 ~~G~L~K~~~~~~~~~~~Wk~R~fvL~~-~~-L~yy~~~~~~~~~g~i~L~~-~~v~~-~~~--------~~~~~~~~~~ 72 (108)
T 1u5d_A 5 KQGYLEKKSKDHSFFGSEWQKRWCVVSR-GL-FYYYANEKSKQPKGTFLIKG-YSVRM-APH--------LRRDSKKESC 72 (108)
T ss_dssp EEEEEEEEEECSSSSCEEEEEEEEEEET-TE-EEEESSTTCSSCSEEEECTT-CEEEE-CGG--------GCSSGGGGGE
T ss_pred EEEEEEEcCCCCCccccCceeeEEEEeC-CE-EEEecCCCCCCCCEEEEecc-eEEEe-CCc--------cccccCCcce
Confidence 5678888886642 578877776743 32 22223221 222222211 11111 111 0112235678
Q ss_pred EEEeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 315 FGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 315 FglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
|-|.|.+...+.|.|+|..+.+.|++.|+..+.
T Consensus 73 F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 73 FELTSQDRRTYEFTATSPAEARDWVDQISFLLK 105 (108)
T ss_dssp EEEECSSSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 999998768899999999999999999998774
No 14
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=90.33 E-value=2.8 Score=32.38 Aligned_cols=92 Identities=16% Similarity=0.108 Sum_probs=55.2
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
-+.|-|.|+.. ..-.||.--+.+.. +. +.=-+++ ..-|.|.-..-.+|... +.......|-
T Consensus 19 ~~~G~L~K~g~-~~~~Wk~R~fvL~~-~~-L~yy~~~~~~~~~g~i~L~~~~~v~~~-------------~~~~~~~~F~ 82 (126)
T 1fao_A 19 TKEGYLTKQGG-LVKTWKTRWFTLHR-NE-LKYFKDQMSPEPIRILDLTECSAVQFD-------------YSQERVNCFC 82 (126)
T ss_dssp CEEEEEEEECS-SSCCEEEEEEEEET-TE-EEEESSTTCSSCSEEEEGGGCCEEEEE-------------CSSSSSSEEE
T ss_pred cEEEEEEEcCC-CCCCcccEEEEEEC-CE-EEEeCCCCCCCceeEEEccceEEEEec-------------ccCCCCCEEE
Confidence 46788888864 33457777666643 22 2222222 12222222221112110 1123457899
Q ss_pred EeecccceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 317 LKTVLRGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 317 lkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
|.|.. +.+.|.|++..+.+.|++.|+..+..
T Consensus 83 i~~~~-r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 83 LVFPF-RTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp EEETT-EEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEeCC-cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 99877 89999999999999999999987743
No 15
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.29 E-value=2.1 Score=32.75 Aligned_cols=97 Identities=13% Similarity=0.117 Sum_probs=56.5
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeeccccccccccccceEEEeeccCCCCCCCcccccCCCcceeEEEee
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKT 319 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFglkT 319 (358)
-+.|-|.|+.+++.-.|+.--+.+. .+.+.. -|+..- .+-+..|-+.-+. + .-.. ..+.......|-|.|
T Consensus 23 ~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~y-y~~~~~----~~~~g~i~L~~~~-v-~~~~--~~~~~~~~~~F~i~~ 92 (122)
T 2yry_A 23 TKAGWLFKQASSGVKQWNKRWFVLV-DRCLFY-YKDEKE----ESILGSIPLLSFR-V-AAVQ--PSDNISRKHTFKAEH 92 (122)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEEE-TTEEEE-ESSTTC----CSCCEEEESTTCC-C-EECC--TTCSCSSSSEEEEEC
T ss_pred cEEEEEEEECCCCCCCcEEEEEEEe-CCEEEE-ECCCCC----CCcccEEEcCCCE-E-EEcC--ccccCCcccEEEEec
Confidence 4788999998666667888777774 233222 222210 1111122111110 0 0000 001123467899887
Q ss_pred cccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 320 VLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 320 a~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
...+.+.|.|++..+.+.|++.|+...
T Consensus 93 ~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 93 AGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp SSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 766899999999999999999998754
No 16
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.14 E-value=2.5 Score=32.91 Aligned_cols=90 Identities=14% Similarity=0.164 Sum_probs=57.0
Q ss_pred hcceeeeecCCCce-eEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 241 RGCELLKRTRKGDL-HWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 241 rG~eLlkrtrkG~l-hwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
+.|-|.|+..+|.+ .||.-=+.+...+..+.=-|+. ..-|.|.-..-.+|.+ .......|-
T Consensus 10 ~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~---------------~~~~~~~F~ 74 (119)
T 2dhk_A 10 LCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCK---------------ADAEEGIFE 74 (119)
T ss_dssp CEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEEC---------------TTGGGCEEE
T ss_pred EEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEec---------------CCCCCCEEE
Confidence 45788888876544 5777666664432133333332 2334444333333331 012456899
Q ss_pred EeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 317 LKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 317 lkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
|.|.. ++..|.|++..+.+.|++.|+...
T Consensus 75 i~~~~-r~~~l~a~s~~e~~~Wi~al~~~~ 103 (119)
T 2dhk_A 75 IKTPS-RVITLKAATKQAMLYWLQQLQMKR 103 (119)
T ss_dssp EECSS-CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEeCC-cEEEEECCCHHHHHHHHHHHHHHH
Confidence 99986 889999999999999999998765
No 17
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=90.10 E-value=1.5 Score=40.53 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=29.7
Q ss_pred CcceeEEEeec--ccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 310 EDRRYFGLKTV--LRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 310 e~r~YFglkTa--~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
+.+..|.+.+. ....++|.|.|..+++.|.+.|+..+.
T Consensus 332 ~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~ 371 (377)
T 3p6a_A 332 DHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAG 371 (377)
T ss_dssp CTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 45667777663 235689999999999999999998763
No 18
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=89.89 E-value=3.6 Score=30.66 Aligned_cols=96 Identities=16% Similarity=0.225 Sum_probs=56.2
Q ss_pred hcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEEE
Q 018315 241 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 317 (358)
Q Consensus 241 rG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFgl 317 (358)
+.|-|.|+... .-.|+.--+.+..++-.+.=-|+. ..-|.|.-.. +.|..|..+ |... .......|-|
T Consensus 9 ~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~-~~v~~~~~~----~~~~---~~~~~~~F~i 79 (109)
T 2i5f_A 9 KQGCLLKQGHR-RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRG-CVVTSVESN----SNGR---KSEEENLFEI 79 (109)
T ss_dssp EEEEEEEECTT-TCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTT-CEEEEECC---------------CCSEEEE
T ss_pred EEEEEEEcCCC-CCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCC-CEEEEccCC----cccc---cCCCceEEEE
Confidence 56778887543 234777766665432133323332 2334333322 444444433 1110 0125678999
Q ss_pred eecccceEEEEeCCchhHhhHHHHHHHH
Q 018315 318 KTVLRGVVEFECRSQREYDIWTQGVARL 345 (358)
Q Consensus 318 kTa~~GvvEFec~s~~~~q~W~~gI~~l 345 (358)
.|..+..+.|.|+|..+.+.|++.|+..
T Consensus 80 ~~~~~~~~~l~a~s~~e~~~Wi~ai~~~ 107 (109)
T 2i5f_A 80 ITADEVHYFLQAATPKERTEWIKAIQMA 107 (109)
T ss_dssp ECTTCCEEEEECSSHHHHHHHHHHHHHH
T ss_pred EeCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 9988667999999999999999999864
No 19
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=89.40 E-value=3.4 Score=31.17 Aligned_cols=97 Identities=18% Similarity=0.220 Sum_probs=56.5
Q ss_pred hcceeeeecCCCceeEEEEEEEEcC-ccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 241 RGCELLKRTRKGDLHWKIVSVYINR-LNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 241 rG~eLlkrtrkG~lhwk~VSVyink-~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
+.|-|+|+... .-.||.--+.+.. .+++.. -+++ ..-|.|.-..-.+|. +..+....|. .......|-
T Consensus 10 ~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~y-y~~~~~~~~~g~i~L~~~~~v~-~~~~~~~~~~-----~~~~~~~F~ 81 (117)
T 1v5u_A 10 YEGILYKKGAF-MKPWKARWFVLDKTKHQLRY-YDHRMDTECKGVIDLAEVEAVA-PGTPTIGAPK-----TVDEKAFFD 81 (117)
T ss_dssp EEEEEEECCCS-SSCCEEEEEEEETTTTEEEE-ESSSSCSSCCCEEEGGGEEEEE-CCCCCTTSCS-----SSCTTTCEE
T ss_pred EEEEEEecCCC-CCCceeeEEEEECCCCEEEE-eecCCCCccceEEEccCcEEEe-ecCccccccc-----cCCCCeEEE
Confidence 56777777543 3457776666653 223222 2222 233444433333332 2222222221 124567899
Q ss_pred EeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 317 LKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 317 lkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
|.|.. +.+.|.|++..+.+.|++.|+..+
T Consensus 82 i~~~~-r~~~l~a~s~~e~~~Wi~al~~~i 110 (117)
T 1v5u_A 82 VKTTR-RVYNFCAQDVPSAQQWVDRIQSCL 110 (117)
T ss_dssp EEESS-CEEEEECSSHHHHHHHHHHHHTTC
T ss_pred EECCC-ceEEEECCCHHHHHHHHHHHHHHh
Confidence 98877 899999999999999999998643
No 20
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=89.39 E-value=5.9 Score=31.42 Aligned_cols=99 Identities=11% Similarity=0.083 Sum_probs=56.4
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeeccc---cccccccccceEEEee---ccCCCCCCCcccccCCCcce
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRH---VAGTITKKKKNVVLEV---IPDMPAWPGRHLLEGGEDRR 313 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkH---v~GAfsKKKK~VV~dV---~~~ipAWpgr~l~e~~e~r~ 313 (358)
-+.|-|+|+.. ..-.||.-=+.+.+++++.- -|+.. ..|.+--...++-..+ |.++. +| +......
T Consensus 9 ~~~G~L~K~g~-~~k~WkkRwFVL~~~~~L~Y-yk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~-~~-----~~~~~~~ 80 (130)
T 2d9v_A 9 VRGGWLWRQSS-ILRRWKRNWFALWLDGTLGY-YHDETAQDEEDRVVIHFNVRDIKVGQECQDVQ-PP-----EGRSRDG 80 (130)
T ss_dssp EEEEEEEEECS-SSCCEEEEEEEEETTTEEEE-ESSSSTTSEEEEEECTTTEEEEEEGGGCSSCC-CC-----SSCCTTT
T ss_pred eEEEEEEeecC-ccCCceeeEEEEccCCEEEE-EeCCCCCCcCceEecccceeEEeccccccccC-CC-----CCCCcCc
Confidence 36788888864 33378887777744444332 22221 1222211111110111 22221 11 1123467
Q ss_pred eEEEeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 314 YFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 314 YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
.|-|.|.+.....|.+++..+.+.|++.|+...
T Consensus 81 ~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~ 113 (130)
T 2d9v_A 81 LLTVNLREGSRLHLCAETRDDAIAWKTALMEAN 113 (130)
T ss_dssp EEEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 899999665789999999999999999998754
No 21
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=88.71 E-value=2.9 Score=33.57 Aligned_cols=96 Identities=16% Similarity=0.251 Sum_probs=59.0
Q ss_pred hhcceeeeecCCCc---eeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcce
Q 018315 240 ARGCELLKRTRKGD---LHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRR 313 (358)
Q Consensus 240 arG~eLlkrtrkG~---lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~ 313 (358)
-+.|-|+|+.++.. -.||.--+.+. .+. +.=-|+. ..-|.|.-..-.|+. ..+ ..+......
T Consensus 18 ~~~G~L~K~g~~~~~~~k~WkkR~fvL~-~~~-L~yyk~~~~~~~~g~i~L~~~~v~~--~~~--------~~~~~~~~~ 85 (148)
T 1u5f_A 18 IKAGYLEKRRKDHSFLGFEWQKRWCALS-KTV-FYYYGSDKDKQQKGEFAIDGYDVRM--NNT--------LRKDGKKDC 85 (148)
T ss_dssp EEEEEEEEECCCSSCSSCSEEEEEEEEE-TTE-EEEESSTTCSSCSEEEECTTCEEEE--CTT--------SCSSTTGGG
T ss_pred cEEEEEEEeCCCCCCcCCCceeEEEEEE-CCE-EEEEcCCCCcccceEEEcCCcEEEE--CCC--------cccCCCCcc
Confidence 47788999987542 36777766664 232 2222333 233333332222221 111 111223458
Q ss_pred eEEEeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 314 YFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 314 YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
.|-|.|.....+.|.|++..+.+.|++.|+..+.
T Consensus 86 ~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 86 CFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp EEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 8999998767899999999999999999998763
No 22
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=88.26 E-value=5.3 Score=30.47 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=58.7
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
-+.|-|+|+..++.-.|+.--+.+. .+.+.. -|+. ..-|.|.-.. +.|..+..+ +.......|-
T Consensus 12 ~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~y-y~~~~~~~~~g~i~l~~-~~v~~~~~~----------~~~~~~~~f~ 78 (123)
T 1upq_A 12 HIRGWLHKQDSSGLRLWKRRWFVLS-GHCLFY-YKDSREESVLGSVLLPS-YNIRPDGPG----------APRGRRFTFT 78 (123)
T ss_dssp EEEEEEEEECSSSSCCEEEEEEEEE-TTEEEE-ESSTTCCSCCEEEEGGG-CEEEECCSS----------CTTSSSSEEE
T ss_pred eEEEEEEeeCCCCCCCceeEEEEEe-CCEEEE-ECCCCCcccceEEECCC-CEEEECCCC----------ccCCCcEEEE
Confidence 4678899988666667888777774 333222 2222 2223333111 222211110 1113567788
Q ss_pred EeecccceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 317 LKTVLRGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 317 lkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
|.|.....+.|.|+|..+.+.|++.|+......
T Consensus 79 i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~~ 111 (123)
T 1upq_A 79 AEHPGMRTYVLAADTLEDLRGWLRALGRASRAE 111 (123)
T ss_dssp EECTTSCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred EECCCCeEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 888776889999999999999999999877543
No 23
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.18 E-value=2.6 Score=32.67 Aligned_cols=100 Identities=13% Similarity=0.119 Sum_probs=59.1
Q ss_pred hcceeeeecCCCceeEEEEEEEEcCccEEEEEeeccccccccccccceEEEeeccCCCCCCCcccccCCCcceeEEEeec
Q 018315 241 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTV 320 (358)
Q Consensus 241 rG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFglkTa 320 (358)
+.|-|+|+.. ..-.||.--+.+..++..+.=-|++.-.+ .+-+..|.+.-+. +....++...|-|.|.
T Consensus 10 ~~G~L~K~~~-~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~--~~~~g~I~L~~~~---------v~~~~~~~~~F~i~~~ 77 (120)
T 2d9x_A 10 VYGYLMKYTN-LVTGWQYRFFVLNNEAGLLEYFVNEQSRN--QKPRGTLQLAGAV---------ISPSDEDSHTFTVNAA 77 (120)
T ss_dssp CEEEEEEEEE-TTTEEEEEEEEECTTTCEEEEESSGGGSS--SCCSEEEECTTCC---------EECCSSSSSCEEECCS
T ss_pred EEEEEEecCC-CCCCceEEEEEEECCCCEEEEEecCcccC--CCccceEEcceEE---------EEecCCCCCEEEEEcC
Confidence 5677888763 33468888777764222333233322100 0112222221111 1111135688999998
Q ss_pred ccceEEEEeCCchhHhhHHHHHHHHHHHHHHh
Q 018315 321 LRGVVEFECRSQREYDIWTQGVARLLNVAAER 352 (358)
Q Consensus 321 ~~GvvEFec~s~~~~q~W~~gI~~lL~~~~~~ 352 (358)
+.....|.|++..+.+.|++.|+..+....++
T Consensus 78 ~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (120)
T 2d9x_A 78 SGEQYKLRATDAKERQHWVSRLQICTQHHTEA 109 (120)
T ss_dssp SSCCEEECCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHhhhh
Confidence 76789999999999999999999877665543
No 24
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=87.95 E-value=1.9 Score=33.01 Aligned_cols=37 Identities=16% Similarity=0.261 Sum_probs=32.7
Q ss_pred cceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 311 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 311 ~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
....|-|.|.. +.+.|.|++..+.+.|++.|+..+..
T Consensus 76 ~~~~F~i~~~~-r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 76 RDNLFEIVTTS-RTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp CSSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEeCC-cEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 46789999887 88999999999999999999987754
No 25
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=87.87 E-value=3.9 Score=30.86 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=30.0
Q ss_pred ceeEEEeecccceEEEEeCCchhHhhHHHHHHHH
Q 018315 312 RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARL 345 (358)
Q Consensus 312 r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~l 345 (358)
...|-|.|..+..+.|.++|..+.+.|++.|+..
T Consensus 68 ~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 101 (109)
T 1wgq_A 68 SKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEG 101 (109)
T ss_dssp SSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHH
Confidence 4789999887677999999999999999999864
No 26
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=87.20 E-value=2.6 Score=36.79 Aligned_cols=39 Identities=23% Similarity=0.395 Sum_probs=30.6
Q ss_pred CcceeEEEeecc--cceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 310 EDRRYFGLKTVL--RGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 310 e~r~YFglkTa~--~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
+++..|-+.+.. ....||-|.+..+++.|.+.|+.-...
T Consensus 133 d~~~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~ 173 (185)
T 2lg1_A 133 EEKGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINT 173 (185)
T ss_dssp CSSEEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 456777777652 256999999999999999999986644
No 27
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=87.16 E-value=2.1 Score=40.42 Aligned_cols=94 Identities=15% Similarity=0.079 Sum_probs=52.9
Q ss_pred hcceeeeecCCCceeEEEEEEEEcCccEEEEEeeccccccccccccceEEEeeccCCCCCCCcccccCCCcceeEEEeec
Q 018315 241 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTV 320 (358)
Q Consensus 241 rG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFglkTa 320 (358)
+.|+|.+.++++ ++.+.+|+=.+-=|+.|-++ ++.|+-+...-+.++.-+. .++++....|-+.+.
T Consensus 246 ~~g~l~~~~~~~---~~~r~~fLF~d~Ll~~k~~~---~~~y~~k~~i~L~~l~v~~--------~~~~~~~~~f~i~~~ 311 (434)
T 3mpx_A 246 KEGTLMKVTGKN---RRPRHLFLMNDVLLYTYPQK---DGKYRLKNTLAVANMKVSR--------PVMEKVPYALKIETS 311 (434)
T ss_dssp ECCEEEEEETTE---EEEEEEEEESSEEEEEEECT---TSCEEEEEEEEC-----CC--------CCCTTSCSEEEEECS
T ss_pred ecceEEEEeCCC---ceEEEEEEECCEEEEEEecC---CCeEEEEEEEEcCCcEEEe--------cCCCCCCeeEEEecC
Confidence 556777766543 45566666555556666443 2223322211122221110 112234677888777
Q ss_pred ccceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 321 LRGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 321 ~~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
+ ..+.|.+.|..+++.|.+.|+..+...
T Consensus 312 ~-~~~~l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 312 E-SCLMLSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp S-CEEEEECSSHHHHHHHHHHHHHC----
T ss_pred C-eEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 7 689999999999999999999988543
No 28
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.76 E-value=5.5 Score=30.63 Aligned_cols=94 Identities=14% Similarity=0.228 Sum_probs=56.1
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeeccccccccccccceEEEeeccCCCCCCCcccccCCCcceeEEEee
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKT 319 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFglkT 319 (358)
-+.|-|+|+.+...-.||.--+.+. .+.+.. -|+..- +....|.+ .... +....+....|-|.|
T Consensus 11 ~~~G~L~K~~~~~~k~WkkR~fvL~-~~~L~y-yk~~~~-----~~~~~i~l--~~~~-------v~~~~~~~~~F~I~~ 74 (114)
T 2da0_A 11 EKKGYLLKKSDGIRKVWQRRKCSVK-NGILTI-SHATSN-----RQPAKLNL--LTCQ-------VKPNAEDKKSFDLIS 74 (114)
T ss_dssp CEEEEEEEECSSSCCCEEEEEEEEE-TTEEEE-CCSSCC-----SCCEEEET--TTSE-------EEECSSSSSCEEEEE
T ss_pred cEEEEEEEeCCCCCCCceeEEEEEe-CCEEEE-EcCCCC-----CCCCEEEe--eeeE-------EEECCCCCCEEEEEc
Confidence 3678899988754357887766663 343332 222211 11111111 0000 000112456899998
Q ss_pred cccceEEEEeCCchhHhhHHHHHHHHHHHHH
Q 018315 320 VLRGVVEFECRSQREYDIWTQGVARLLNVAA 350 (358)
Q Consensus 320 a~~GvvEFec~s~~~~q~W~~gI~~lL~~~~ 350 (358)
.. +.+.|.|+|..+.+.|++.|+.....+-
T Consensus 75 ~~-r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 104 (114)
T 2da0_A 75 HN-RTYHFQAEDEQDYVAWISVLTNSKEEAL 104 (114)
T ss_dssp TT-EEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CC-cEEEEEcCCHHHHHHHHHHHHHHHHHHH
Confidence 77 8999999999999999999998765443
No 29
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=86.65 E-value=6.9 Score=29.53 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=33.4
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
.....|-|.|.+...+.|.|+|..+.+.|++.|+..+..
T Consensus 64 ~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~ 102 (113)
T 1pls_A 64 KRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp CSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 356689999887678999999999999999999987643
No 30
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=86.13 E-value=7.6 Score=32.88 Aligned_cols=106 Identities=16% Similarity=0.183 Sum_probs=63.3
Q ss_pred hcceeeeecCCC----ceeEEEEEEEEcCccEEEEE-----eeccccccccccccceEEEeeccCCCCCCCcc-----cc
Q 018315 241 RGCELLKRTRKG----DLHWKIVSVYINRLNQVMLK-----MKSRHVAGTITKKKKNVVLEVIPDMPAWPGRH-----LL 306 (358)
Q Consensus 241 rG~eLlkrtrkG----~lhwk~VSVyink~~qV~LK-----mKSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~-----l~ 306 (358)
+.|-|+|+...+ .--||.==+.+....-.--| -+.+..-|.|.-..-.+|..|..+.+.=+++. ..
T Consensus 5 keG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~ 84 (169)
T 1btk_A 5 LESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEE 84 (169)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC------
T ss_pred EEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccccCc
Confidence 678999987544 23588887777543222222 12345567776665555555532111000110 00
Q ss_pred cCC-Cc-------ceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 307 EGG-ED-------RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 307 e~~-e~-------r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
+.+ ++ ...|-|.|.+ +.+-|.++|..+.+.|++.|+..+.
T Consensus 85 ~~~~~~~~i~~~~~~~F~I~t~~-rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 85 SSEMEQISIIERFPYPFQVVYDE-GPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp ---CCTTHHHHCCCEEEEEEETT-CCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 000 11 0568899988 7889999999999999999998765
No 31
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=85.79 E-value=11 Score=29.19 Aligned_cols=99 Identities=15% Similarity=0.209 Sum_probs=57.6
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
-+.|-|+|+... .-.||.--+.+..++-.+.=-++. ..-|.|.-.. +.|..|.++ |... .......|-
T Consensus 19 ~~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~-~~v~~~~~~----~~~~---~~~~~~~F~ 89 (129)
T 1x05_A 19 IKQGCLLKQGHR-RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRG-CVVTSVESN----SNGR---KSEEENLFE 89 (129)
T ss_dssp EEEEEEEECCSS-CCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTT-CEEEECCCC----CCSS---SCSSCSEEE
T ss_pred eEEEEEEecCCC-CCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccC-CEEEEccCC----cccc---ccCCCeEEE
Confidence 467788887542 234666555553321122222222 2334443332 344444333 2110 113578899
Q ss_pred EeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 317 LKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 317 lkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
|.|..+..+.|.+++..+.+.|++.|+..+.
T Consensus 90 i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 120 (129)
T 1x05_A 90 IITADEVHYFLQAATPKERTEWIKAIQMASR 120 (129)
T ss_dssp EECTTCCCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 9998767799999999999999999988664
No 32
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=85.67 E-value=0.92 Score=33.58 Aligned_cols=34 Identities=12% Similarity=0.209 Sum_probs=30.0
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVAR 344 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~ 344 (358)
++...|-|.|.. ++..|.|+|..+.+.|++.|+.
T Consensus 58 ~~~~~F~i~~~~-r~~~l~A~s~~e~~~Wi~aLq~ 91 (94)
T 2rsg_A 58 FDECRFDISVND-SVWYLRAQDPDHRQQWIDAIEQ 91 (94)
T ss_dssp SCSSEEEEEETT-EEEEEECCSSCCTHHHHHHHHH
T ss_pred ccceeEEEEeCC-eEEEEECCCHHHHHHHHHHHHh
Confidence 456789999887 8999999999999999999874
No 33
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=83.46 E-value=6.4 Score=30.47 Aligned_cols=38 Identities=16% Similarity=0.245 Sum_probs=32.8
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
.....|-|.|.+....-|.|+|..+.+.|++.|+..+.
T Consensus 80 ~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 80 KRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp SCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence 45678999998856899999999999999999987654
No 34
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=83.04 E-value=7 Score=38.91 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=30.1
Q ss_pred CcceeEEEeec--ccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 310 EDRRYFGLKTV--LRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 310 e~r~YFglkTa--~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
+.+..|.+.+. ..-.++|.|.+..+++.|.+.|+..+.
T Consensus 485 d~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~ 524 (536)
T 3odw_A 485 DHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAG 524 (536)
T ss_dssp CTTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHH
Confidence 45677777662 225699999999999999999998764
No 35
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=82.35 E-value=5.4 Score=30.24 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=30.9
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARL 345 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~l 345 (358)
.....|-|.|...++..|.|+|..+.+.|++.|+..
T Consensus 64 ~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~ 99 (107)
T 2cof_A 64 DHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSE 99 (107)
T ss_dssp TBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHH
Confidence 356789999984588999999999999999998864
No 36
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=82.11 E-value=9.6 Score=28.11 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=29.8
Q ss_pred cceeEEEeecccceEEEEeCCchhHhhHHHHHHH
Q 018315 311 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVAR 344 (358)
Q Consensus 311 ~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~ 344 (358)
....|-|.|.+...+.|.|+|..+.+.|++.|+.
T Consensus 72 ~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~ 105 (106)
T 1btn_A 72 KKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISS 105 (106)
T ss_dssp SSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHH
T ss_pred CccEEEEEecCCCEEEEECCCHHHHHHHHHHHhc
Confidence 4568999988767899999999999999999864
No 37
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=81.69 E-value=15 Score=30.96 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=30.9
Q ss_pred ceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 312 RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 312 r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
...|-|.|.+ +.+.|.++|..+.+.|++.|+..+.
T Consensus 79 ~~~F~I~t~~-r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 79 CAKFTLVLPK-EEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp CCEEEEECSS-CCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCC-CEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 4679999988 7899999999999999999987654
No 38
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=80.89 E-value=7.1 Score=31.94 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=31.0
Q ss_pred cceeEEEeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 311 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 311 ~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
....|-|.|.+ +...|.|++..+.+.|++.|+...
T Consensus 76 ~~~~F~I~t~~-r~~~l~A~s~~e~~~Wi~ai~~~~ 110 (168)
T 2j59_M 76 RKNVFRLTTSD-CECLFQAEDRDDMLAWIKTIQESS 110 (168)
T ss_dssp CSSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHH
Confidence 46789999998 789999999999999999998643
No 39
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=79.31 E-value=23 Score=28.50 Aligned_cols=100 Identities=8% Similarity=0.036 Sum_probs=55.8
Q ss_pred hHhhhcceeeeecCCCceeEEEEEEEEcCccEEEEEeeccccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 237 ELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 237 ~~larG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
.++.. |+|.+-.++..-.-+.|.+|+=.+-=|+-+-++ +-.| ++ .+.+|-++..=.-.++.+++.-.--|=
T Consensus 7 ~lv~e-G~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~-~~~~------~~-~~~~~~~L~~~~v~d~~d~~~~~n~f~ 77 (113)
T 1zc3_B 7 YLVYN-GDLVEYEADHMAQLQRVHGFLMNDCLLVATWLP-QRRG------MY-RYNALYPLDRLAVVNVKDNPPMKDMFK 77 (113)
T ss_dssp CEEEE-EEEEEEETTTCCEEEEEEEEEESSEEEEEEEEC-CTTS------CE-EEEEEEETTTCEEEEECCBTTBSSEEE
T ss_pred EEEEe-CcEEEEccccCCCCccEEEEecCCEEEEEEEec-cCcc------cE-EEEEEEEcccCEEEECCCCcccceEEE
Confidence 34444 788888776655667787777544333333332 2112 11 222221110000000111223456677
Q ss_pred EeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 317 LKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 317 lkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
|.+.+ ...-|.|++..+|+.|.+.|+.-.
T Consensus 78 i~~~~-~s~~~~aes~~eK~~Wl~~~~~a~ 106 (113)
T 1zc3_B 78 LLMFP-ESRIFQAENAKIKREWLEVLEETK 106 (113)
T ss_dssp EEETT-EEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEeCC-ceEEEEcCCHHHHHHHHHHHHHHH
Confidence 77777 778999999999999999998754
No 40
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=78.84 E-value=7.8 Score=34.03 Aligned_cols=97 Identities=16% Similarity=0.299 Sum_probs=59.0
Q ss_pred hhhcceeeeecCCC---ceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcc
Q 018315 239 LARGCELLKRTRKG---DLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDR 312 (358)
Q Consensus 239 larG~eLlkrtrkG---~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r 312 (358)
+-+.|-|+|+..+. .-.||.--+.+.. + .+.=-|+. ..-|.|.-..-.+|.. .+ ....+...
T Consensus 106 v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~-~-~L~Yyk~~~~~~p~g~I~L~~~~~v~~--~~--------~~~~~~k~ 173 (211)
T 1u5e_A 106 VIKAGYLEKRRKDHSFLGFEWQKRWCALSK-T-VFYYYGSDKDKQQKGEFAIDGYDVRMN--NT--------LRKDGKKD 173 (211)
T ss_dssp EEEEEEEEEEEHHHHTTTCCCEEEEEEEET-T-EEEEESSTTCSSCSEEEECTTCEEEEC--GG--------GCSSTTGG
T ss_pred ccEEEEEEEECCCCCcCCCCcEeEEEEEEC-C-EEEEEcCCCCccceEEEEeCCcEEEEc--CC--------ccccCCCC
Confidence 34788899987652 2367776666632 2 22223332 2233333333233221 11 01122346
Q ss_pred eeEEEeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 313 RYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 313 ~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
..|-|.|...+...|.|++..+.+.|++.|+..+.
T Consensus 174 ~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 174 CCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQ 208 (211)
T ss_dssp GEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 78999998768999999999999999999988653
No 41
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=78.53 E-value=16 Score=29.46 Aligned_cols=100 Identities=12% Similarity=0.047 Sum_probs=61.5
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeec------cccccccccccceEEEeeccCCCCCCCcccccCCCcce
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKS------RHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRR 313 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKS------kHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~ 313 (358)
-+.|-|.|++.- .--|+.-=+.+..+ .+.=-|+ ...-|.|.= ..|.|..+.++-+.-. ........
T Consensus 7 ~k~G~L~Kk~~~-~k~W~~rwfVL~~~--~L~yyK~~~~~~d~~P~gsI~L-~~c~v~~~~~~~~~~~----~~~~~~~~ 78 (120)
T 4a6h_A 7 IKSGFLERRSKF-LKSYSKGYYVLTPN--FLHEFKTADRKKDLVPVMSLAL-SECTVTEHSRKNSTSS----PNSTGSDA 78 (120)
T ss_dssp SEEEEEEEEETT-TTEEEEEEEEECSS--EEEEESSCCTTTCCSCSEEEEG-GGEEEEEECCCCC-------------CC
T ss_pred cEEEEEEEcCCC-CCCCccEEEEEeCC--EEEEEcCCCcCcCCCceEEEEC-CCCEEEEccccccccc----ccccCCCc
Confidence 466788888762 23577665555332 3333332 224566665 4788877665511000 00001455
Q ss_pred eEEEeecccc------eEEEEeCCchhHhhHHHHHHHHHH
Q 018315 314 YFGLKTVLRG------VVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 314 YFglkTa~~G------vvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
-|-|++.+.| ...|.++|+.+.+.|++.|+.+..
T Consensus 79 ~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 79 KFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp EEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 6888887766 799999999999999999998753
No 42
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=78.42 E-value=2.6 Score=31.41 Aligned_cols=35 Identities=11% Similarity=0.072 Sum_probs=29.7
Q ss_pred cceeEEEeecccceEEEEeCCchhHhhHHHHHHHH
Q 018315 311 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARL 345 (358)
Q Consensus 311 ~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~l 345 (358)
+...|-|.|.......|.|+|..+.+.|++.|+.-
T Consensus 57 ~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a 91 (103)
T 3rcp_A 57 DNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSS 91 (103)
T ss_dssp CSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTT
T ss_pred CCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHH
Confidence 35679998875589999999999999999998753
No 43
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=78.16 E-value=13 Score=29.99 Aligned_cols=96 Identities=9% Similarity=0.084 Sum_probs=59.6
Q ss_pred hcceeeeecCCCceeEEEEEEEEcCc-cEEEEEeec-------cccccccccccceEEEeeccCCCCCCCcccccCCCcc
Q 018315 241 RGCELLKRTRKGDLHWKIVSVYINRL-NQVMLKMKS-------RHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDR 312 (358)
Q Consensus 241 rG~eLlkrtrkG~lhwk~VSVyink~-~qV~LKmKS-------kHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r 312 (358)
+.|-|.|+.+.+.=.||.==+.++.. +..+.=.|+ +..-|.|.-.--+.|.....+ +....+
T Consensus 17 ~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~----------~~~~~~ 86 (126)
T 1v5p_A 17 ICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPK----------QKPKTP 86 (126)
T ss_dssp EECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTT----------TSCSCS
T ss_pred eEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcc----------cCCCCC
Confidence 35888998876666788777777533 443333343 223344433322233322111 011245
Q ss_pred eeEEEeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 313 RYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 313 ~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
..|.|.|.. +..-|.|+|+.+.+.|++.|+..+.
T Consensus 87 ~~F~i~t~~-r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 87 FCFVINALS-QRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp SEEEEECSS-CEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred EEEEEECCC-EEEEEECCCHHHHHHHHHHHHHHHh
Confidence 678888877 8999999999999999999987543
No 44
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=76.84 E-value=3.8 Score=36.14 Aligned_cols=36 Identities=6% Similarity=0.093 Sum_probs=32.1
Q ss_pred cceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 311 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 311 ~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
....|-|.|.. +...|.|+|..+.+.|++.|+..+.
T Consensus 120 k~~~F~I~t~~-r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 120 KENGIDIIMAD-RTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp TTSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEcCC-cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 45689999877 8999999999999999999998775
No 45
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=76.32 E-value=16 Score=34.20 Aligned_cols=39 Identities=13% Similarity=0.263 Sum_probs=30.5
Q ss_pred CcceeEEEeeccc---ceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLR---GVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 310 e~r~YFglkTa~~---GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
+...+|.+.+... ..++|.|.|..+++.|++.|+..+.-
T Consensus 368 ~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 368 DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 4556666666432 47999999999999999999998753
No 46
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=76.23 E-value=4.2 Score=31.76 Aligned_cols=37 Identities=8% Similarity=0.218 Sum_probs=32.3
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
.....|-|.|.+.....|.|+|..+.+.|++.|+..+
T Consensus 82 kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i 118 (122)
T 1dro_A 82 KKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQS 118 (122)
T ss_dssp SSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 3567899999886789999999999999999998765
No 47
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=74.47 E-value=18 Score=28.79 Aligned_cols=39 Identities=10% Similarity=0.291 Sum_probs=33.1
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
.....|-|.|.+....-|.++|+.+.+.|++.|+.-+..
T Consensus 87 kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 87 SRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp SSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 456789999998567899999999999999999987643
No 48
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=73.92 E-value=12 Score=35.97 Aligned_cols=99 Identities=12% Similarity=0.153 Sum_probs=59.0
Q ss_pred hcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEEE
Q 018315 241 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 317 (358)
Q Consensus 241 rG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFgl 317 (358)
+.|-|.|+.+...-.||.-=+.+. . ..+.=-|+. ..-|.|.-..-..|+.|....|.= ..+......|-|
T Consensus 271 k~G~L~K~g~~~~k~WKkRwFVL~-~-~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~-----~~~~~~~~~F~I 343 (386)
T 3lju_X 271 KEGYMEKTGPKQTEGFRKRWFTMD-D-RRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPS-----TQGHHWPHGITI 343 (386)
T ss_dssp EEEEEEECCTTSCSCCEEEEEEEE-T-TEEEEESSTTCSBCSEEEECCCGGGTCEEEESCCTT-----CCSCCSCEEEEE
T ss_pred eeeeEEEECCCCCCCCcccEEEEE-C-CEEEEEecCCCcccceEEEeecceeeeeecccCCcc-----ccccCCCcEEEE
Confidence 567888887665335665544443 2 222222322 222444333333445555443321 001011478999
Q ss_pred eecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 318 KTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 318 kTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
.|.+ +...|.+++..+.+.|++.|+..+.
T Consensus 344 ~t~~-rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 344 VTPD-RKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp ECSS-CEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9988 8999999999999999999999874
No 49
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=72.63 E-value=28 Score=26.26 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=22.1
Q ss_pred ceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 323 GVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 323 GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
..+.|.|+|..+.+.|++.|+..+.
T Consensus 96 r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 96 VVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHHHHhc
Confidence 5789999999999999999987653
No 50
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=71.48 E-value=29 Score=25.80 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=55.4
Q ss_pred hhcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc---ccccccccccceEEEeeccCCCCCCCcccccCCCcceeEE
Q 018315 240 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 316 (358)
Q Consensus 240 arG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFg 316 (358)
-+.|-|+|+... .-.||.--+.+... .+.=-|+. ..-|.|.-. .+.|..+..+ + .......|-
T Consensus 9 ~~~G~L~K~g~~-~~~Wk~R~fvL~~~--~L~yy~~~~~~~~~g~i~L~-~~~v~~~~~~----~------~~~~~~~f~ 74 (118)
T 1v89_A 9 IKMGWLKKQRSI-VKNWQQRYFVLRAQ--QLYYYKDEEDTKPQGCMYLP-GCTIKEIATN----P------EEAGKFVFE 74 (118)
T ss_dssp EEEEEEEEECSS-SSCEEEEEEEEETT--EEEEESSSSCCSCSEEECST-TEEEEEECCC----S------SCCCCCEEE
T ss_pred cEEEEEEecCCC-CCCccEEEEEEECC--EEEEEeCCCCCCceEEEECC-CCEEEEcCcC----c------ccCCcceEE
Confidence 367788887532 23477766666432 22222222 233333332 2333333322 1 112467898
Q ss_pred Eee-------cccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 317 LKT-------VLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 317 lkT-------a~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
|.| .....+.|.|++..+.+.|++.|+..+.
T Consensus 75 i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 75 IIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp EEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 988 2558899999999999999999988654
No 51
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=69.94 E-value=15 Score=33.55 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=28.7
Q ss_pred ceeEEEeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 312 RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 312 r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
...|-|.+.+...+.|-|.|..+++.|.+.|+.+.
T Consensus 314 ~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~ 348 (354)
T 1dbh_A 314 KHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQ 348 (354)
T ss_dssp CSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHH
Confidence 46677766544679999999999999999998764
No 52
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=69.78 E-value=29 Score=26.54 Aligned_cols=40 Identities=13% Similarity=0.185 Sum_probs=31.8
Q ss_pred cceeEEEee---cccceEEEEeCCchhHhhHHHHHHHHHHHHH
Q 018315 311 DRRYFGLKT---VLRGVVEFECRSQREYDIWTQGVARLLNVAA 350 (358)
Q Consensus 311 ~r~YFglkT---a~~GvvEFec~s~~~~q~W~~gI~~lL~~~~ 350 (358)
....|-|.| .......|.++|..+.+.|++.|+..+....
T Consensus 71 ~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 113 (125)
T 1unq_A 71 RPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLK 113 (125)
T ss_dssp STTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 456898885 3336788999999999999999998775443
No 53
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=67.97 E-value=40 Score=26.07 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=32.3
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
+....|-|.|.+.....|.++|..+.+.|.+.|+.-+
T Consensus 64 ~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~ 100 (112)
T 3cxb_B 64 DRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAV 100 (112)
T ss_dssp SCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 4567999998876789999999999999999998755
No 54
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=66.67 E-value=14 Score=39.84 Aligned_cols=103 Identities=14% Similarity=0.201 Sum_probs=62.1
Q ss_pred chhhHhhhcceeeeecCC-CceeEEEEEEEEcCccEEEEEeeccccccccccccceEEE------eeccCCCCC-C----
Q 018315 234 CSRELLARGCELLKRTRK-GDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVL------EVIPDMPAW-P---- 301 (358)
Q Consensus 234 ~~~~~larG~eLlkrtrk-G~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~VV~------dV~~~ipAW-p---- 301 (358)
+-.+.|.+|+.|.|.+++ +. -|.+-+.++.++..+.=-.+. |+.-++ +|+..--+- |
T Consensus 16 ~Vp~~L~~Gt~f~K~~~~~~~--~k~~~frLD~d~~~L~W~~~~---------ke~~~l~Is~IkeIR~G~~a~~pKd~k 84 (885)
T 3ohm_B 16 TVVETLRRGSKFIKWDEETSS--RNLVTLRVDPNGFFLYWTGPN---------MEVDTLDISSIRDTRTGRYARLPKDPK 84 (885)
T ss_dssp CCCHHHHHCEEEEEECTTCCS--CCEEEEEECTTSCEEEEECGG---------GCEEEEEGGGEEEEEETTTSCCCCSHH
T ss_pred CccHHHhCCCeEEEECCCCCC--cEEEEEEECCCCCEEEEeCCC---------CCCceEeeehhhhhhcCcCCCCCccHH
Confidence 456899999999999988 54 356888888887765433211 222223 332211000 1
Q ss_pred Cccccc-----CCCcceeEEEeecccc----eEEEEeCCchhHhhHHHHHHHHHH
Q 018315 302 GRHLLE-----GGEDRRYFGLKTVLRG----VVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 302 gr~l~e-----~~e~r~YFglkTa~~G----vvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
.|...+ ...+.+.|=|....+. .+-|-|.+..+.+.|++|+..|+.
T Consensus 85 lr~~~~~~~~~~~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~ 139 (885)
T 3ohm_B 85 IREVLGFGGPDARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAM 139 (885)
T ss_dssp HHHCC---------CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HHHHhccCcccCcccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHh
Confidence 122111 2235666744444322 388999999999999999999985
No 55
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=65.38 E-value=59 Score=30.05 Aligned_cols=38 Identities=11% Similarity=0.200 Sum_probs=29.2
Q ss_pred ceeEEEeec-ccceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 312 RRYFGLKTV-LRGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 312 r~YFglkTa-~~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
..-|-|... ....+.|.|.|..+++.|.+.|+..+...
T Consensus 289 ~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 289 TKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp TTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 456777542 22568999999999999999999987443
No 56
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=64.89 E-value=48 Score=30.71 Aligned_cols=40 Identities=13% Similarity=0.292 Sum_probs=29.7
Q ss_pred cceeEEEeecc--cceEEEEeCCchhHhhHHHHHHHHHHHHH
Q 018315 311 DRRYFGLKTVL--RGVVEFECRSQREYDIWTQGVARLLNVAA 350 (358)
Q Consensus 311 ~r~YFglkTa~--~GvvEFec~s~~~~q~W~~gI~~lL~~~~ 350 (358)
....|-+.+.. ...++|-|.|..+++.|.+.|+..+....
T Consensus 331 ~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~ 372 (385)
T 1txd_A 331 NKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVK 372 (385)
T ss_dssp CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 34556555432 25699999999999999999999875543
No 57
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=64.37 E-value=20 Score=30.95 Aligned_cols=94 Identities=12% Similarity=0.142 Sum_probs=55.7
Q ss_pred eeecCCCceeEEEEEEEEcCccEEEEEe-eccccccccccccceEEEeeccCCCCCCCcccccCCCcceeEEEeecc---
Q 018315 246 LKRTRKGDLHWKIVSVYINRLNQVMLKM-KSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVL--- 321 (358)
Q Consensus 246 lkrtrkG~lhwk~VSVyink~~qV~LKm-KSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~e~r~YFglkTa~--- 321 (358)
.|.+++|. |-|-+..|=| -=|+-|+ ++|-.+++|+=+...-+.|+.-. +.++......|=|....
T Consensus 26 ~K~~~kg~-qqR~~FLFND--~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~--------~~e~e~~p~~~~l~s~~~G~ 94 (140)
T 3qwm_A 26 NKPQKLGL-HQREIFLFND--LLVVTKIFQKKKNSVTYSFRQSFSLYGMQVL--------LFENQYYPNGIRLTSSVPGA 94 (140)
T ss_dssp TSCCCTTT-TEEEEEEESS--CEEEEECCC---CCCCCCCEEEECCTTEEEE--------EECCSSCTTEEEEEECCTTS
T ss_pred cccccccc-cceEEEEecc--hhhheeecccCCCCCceEEEEEeeecceEEE--------cccCCCCceEEEEEecCCCC
Confidence 68889985 8888887543 3566663 33445667776654444444322 11121112223233222
Q ss_pred --cceEEEEeCCchhHhhHHHHHHHHHHHHH
Q 018315 322 --RGVVEFECRSQREYDIWTQGVARLLNVAA 350 (358)
Q Consensus 322 --~GvvEFec~s~~~~q~W~~gI~~lL~~~~ 350 (358)
+-+|+|-+.+..+.++|.+.++..+.-+.
T Consensus 95 ~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 95 DIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 24699999999999999999998875443
No 58
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=62.15 E-value=9.7 Score=32.37 Aligned_cols=93 Identities=14% Similarity=0.165 Sum_probs=63.4
Q ss_pred eeecCCCceeEEEEEEEEcCccEEEEEeeccccccccccccceE--EEeeccCCCCCCCcccccCCCcceeEEEeecccc
Q 018315 246 LKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNV--VLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRG 323 (358)
Q Consensus 246 lkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~V--V~dV~~~ipAWpgr~l~e~~e~r~YFglkTa~~G 323 (358)
+....+|.+||+.++ .+||||+ -| -. ++.|-.|. |..|....|.=+--+++++..+.-||-|+..+ |
T Consensus 23 i~~~~~G~~rfrLka----~NGeiI~--sS-e~---Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~Lka~N-g 91 (130)
T 2k8e_A 23 LSKSSDNQFRFVLKA----GNGETIL--TS-EL---YTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAAN-H 91 (130)
T ss_dssp EEECTTCCEEEEEEC----TTSCEEE--EC-CC---BSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEEECTT-S
T ss_pred EEEcCCCCEEEEEEe----CCCCEEE--Ec-CC---cCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEEEeCC-C
Confidence 456789999999765 6899999 44 22 55555442 33444455443333445566789999999998 8
Q ss_pred eEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 324 VVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 324 vvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
.|-..-+.+..+..=..||+.+...+
T Consensus 92 qvIa~Se~Y~ska~a~~gI~sVk~na 117 (130)
T 2k8e_A 92 QIIGSSQMYATAQSRETGIASVKANG 117 (130)
T ss_dssp CEEEECCCBSSHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCcCCHHHHHHHHHHHHHHC
Confidence 88777766677777778887776543
No 59
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=61.54 E-value=9 Score=30.44 Aligned_cols=37 Identities=11% Similarity=0.191 Sum_probs=31.6
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
.....|-|+|.+.....|.++|..+-+.|.+.|+.-+
T Consensus 86 krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI 122 (124)
T 3pp2_A 86 SRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGI 122 (124)
T ss_dssp SSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 3567899999885579999999999999999998744
No 60
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=61.29 E-value=43 Score=35.48 Aligned_cols=106 Identities=11% Similarity=0.117 Sum_probs=64.8
Q ss_pred chhhHhhhcceeeeecCCCceeEEEEEEEEcCccEEE-EEeeccccccccccccceE----EEeeccCC-CCCCC----c
Q 018315 234 CSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVM-LKMKSRHVAGTITKKKKNV----VLEVIPDM-PAWPG----R 303 (358)
Q Consensus 234 ~~~~~larG~eLlkrtrkG~lhwk~VSVyink~~qV~-LKmKSkHv~GAfsKKKK~V----V~dV~~~i-pAWpg----r 303 (358)
.-.+.|.+|+.|.|..+++. +-+.+.+.++..+..+ =+-.+ |..+.+ |.+|+..- ..+|- +
T Consensus 12 ~v~~~L~~Gt~~~K~~~~~~-~~k~~~frLd~d~~~l~W~~~~--------k~~~~l~I~~IkeIR~G~~s~~pk~~~~~ 82 (799)
T 2zkm_X 12 KVKAYLSQGERFIKWDDETT-VASPVILRVDPKGYYLYWTYQS--------KEMEFLDITSIRDTRFGKFAKMPKSQKLR 82 (799)
T ss_dssp CCCHHHHHCEEEEEECTTTC-CEEEEEEEECTTSCEEEEEETT--------SCEEEEEGGGEEEEEEGGGSCCCCSHHHH
T ss_pred cccHHHhCCCEEEEEcCCCc-ceeEEEEEEcCCCCEEEEccCC--------CcCceEeeeeeHHhhcCCCCCCCchHHHH
Confidence 45678999999999988774 3377888888776543 33221 112222 34454221 11221 1
Q ss_pred ccc-----cCCCcceeEEEeecccc----eEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 304 HLL-----EGGEDRRYFGLKTVLRG----VVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 304 ~l~-----e~~e~r~YFglkTa~~G----vvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
+.+ +...+.++|=|-..... .+-|-|.+..+.+.|++|+..|+.-
T Consensus 83 e~~~~~~~~~~~e~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~ 136 (799)
T 2zkm_X 83 DVFNMDFPDNSFLLKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKH 136 (799)
T ss_dssp HHTTCSSTTCCGGGTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred HHhcccCcccccccceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 111 11135677755444423 3789999999999999999999853
No 61
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=60.56 E-value=33 Score=31.42 Aligned_cols=37 Identities=14% Similarity=0.284 Sum_probs=27.8
Q ss_pred cceeEEEeecc---cceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 311 DRRYFGLKTVL---RGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 311 ~r~YFglkTa~---~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
...+|.+.+.. ...++|-|.|..+++.|.+.|+..+.
T Consensus 327 ~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~ 366 (368)
T 1xcg_A 327 KRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR 366 (368)
T ss_dssp SSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 34555555432 25799999999999999999988664
No 62
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=59.75 E-value=63 Score=29.35 Aligned_cols=40 Identities=18% Similarity=0.295 Sum_probs=33.9
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
.....|-|.|.......|.++|..+.+.|++.|+......
T Consensus 87 kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 87 KKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp SCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 3577899999765789999999999999999999876443
No 63
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=59.57 E-value=20 Score=28.26 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=29.8
Q ss_pred cceeEEEeecc--cceEEEEeCCchhHhhHHHHHHHHHHHHH
Q 018315 311 DRRYFGLKTVL--RGVVEFECRSQREYDIWTQGVARLLNVAA 350 (358)
Q Consensus 311 ~r~YFglkTa~--~GvvEFec~s~~~~q~W~~gI~~lL~~~~ 350 (358)
....|-|.+.+ ...+.|.|+|+.+.+.|++.|.....-++
T Consensus 81 k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~~ 122 (124)
T 2w2x_D 81 KSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKID 122 (124)
T ss_dssp BSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC---
T ss_pred CCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhhc
Confidence 34468887765 35799999999999999999998664443
No 64
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=57.19 E-value=7.4 Score=30.66 Aligned_cols=35 Identities=34% Similarity=0.616 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHcCCCchhHHHhh-hhhhccccCCchhh
Q 018315 128 VAAQCVETAEAMGAEREHLAAVV-SSAVNVRSAGDIMT 164 (358)
Q Consensus 128 vAaqCvE~AE~~GA~rd~vasaV-~SAV~vrs~gDimT 164 (358)
||-||+| |+.|-+.+....+| ..++..++.-+|..
T Consensus 37 VAiqCI~--~aF~v~~~d~~~~v~~~~~~~q~L~~if~ 72 (74)
T 2lxb_A 37 VAMDCIS--EAFGFEREAVSGILGKSEFKGQHLADILN 72 (74)
T ss_dssp HHHHHHH--HHHTCCTTTHHHHHTTCCCSSCSSSSCGG
T ss_pred HHHHHHH--HHhCCCchhhHHHHHHhcccCCCHHHHHh
Confidence 7889998 88999999999999 88999888888763
No 65
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=56.71 E-value=1.1 Score=43.89 Aligned_cols=67 Identities=22% Similarity=0.401 Sum_probs=34.6
Q ss_pred cccchhhhhhhccCCCCCCCCCCCCcccccccCCCCCcccccccccccccccCCcchhhhhhhhHHHhHHHHh
Q 018315 4 HWRWFSVQFCRNNNNNSSANNIHGGYHHHQLNTGSTFRTPAAAASATPVAAAGGKTVGRWLKDRREKKKEEAR 76 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fr~~~~~~~~~~~~~~~~~tvgrWlk~~k~KKKEe~R 76 (358)
-|+..++. ++.+.+..+-.|.||-||..|+...+-=.+.+. -.-..--..|++||++-+++++...|
T Consensus 393 PW~~~gv~--~~~s~~~~~~~I~g~~Hc~Dl~~~~~~Dp~~l~----~ar~~~~~~i~~Wl~~~~~~~~~~~~ 459 (472)
T 4ebb_A 393 PWAGGGIR--RNLSASVIAVTIQGGAHHLDLRASHPEDPASVV----EARKLEATIIGEWVKAARREQQPALR 459 (472)
T ss_dssp TTGGGSCC--SCCSSSEEEEEETTCCTTGGGSCCCTTCCHHHH----HHHHHHHHHHHHHHHHHC--------
T ss_pred CCcCccCC--CCCCCCceEEEeCcCeeeccccCCCCCCCHHHH----HHHHHHHHHHHHHHHHHHHhcCCcCC
Confidence 37776664 233333445568999999999876443211111 10001135799999998887776554
No 66
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=55.61 E-value=31 Score=36.86 Aligned_cols=109 Identities=9% Similarity=-0.005 Sum_probs=63.5
Q ss_pred chhhHhhhcceeeeecCCCceeEEEEEEEEcCccEEEEEeecccccc--ccccccceEEEeeccCCCCCCCc-----ccc
Q 018315 234 CSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAG--TITKKKKNVVLEVIPDMPAWPGR-----HLL 306 (358)
Q Consensus 234 ~~~~~larG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~G--AfsKKKK~VV~dV~~~ipAWpgr-----~l~ 306 (358)
+-.+.|.+|+.|+|.++++.-. +.+.++++..+..+.=-.++. -+ .|. =+-|.+|+..--+-+.+ ...
T Consensus 17 ~vp~~L~~G~~~~K~~~~s~~~-~~~~f~lD~d~~~L~W~~~~k-~~~~~l~---I~~I~eVR~G~~t~~pk~~klr~~~ 91 (816)
T 3qr0_A 17 KVPEQLIKGDKFLKWEEGSSGF-IEILLRVDPKGYFLYWKIEGK-EDTQLLD---LAYVRDIRCAKYAKPPKDKKIKEAG 91 (816)
T ss_dssp CCCHHHHHCEEEEEECTTCCCC-EEEEEEECTTSCEEEECCTTC-SSCEEEE---GGGEEEEEEGGGSCCCCSHHHHHHH
T ss_pred cCCHHHhCCCeEEEECCCCCcc-eeEEEEEcCCCCEEEEeCCCC-CcCcEEE---eeeeeeeecCCcCCCCccHHHHHHH
Confidence 5678999999999999999654 678899988876554322110 00 010 01123333221111100 111
Q ss_pred ------cCCCcceeEEEeeccc-ceE---EEEeCCchhHhhHHHHHHHHHH
Q 018315 307 ------EGGEDRRYFGLKTVLR-GVV---EFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 307 ------e~~e~r~YFglkTa~~-Gvv---EFec~s~~~~q~W~~gI~~lL~ 347 (358)
+...+.+.|=|-...+ ..+ -|-|.+..+.+.|++|+..|+.
T Consensus 92 ~~~g~~~~~~e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~ 142 (816)
T 3qr0_A 92 TNFGSSNIPLQDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAY 142 (816)
T ss_dssp HHSSCTTSCHHHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred HhcCCCcccccccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 1112456664433332 224 7899999999999999999873
No 67
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=52.41 E-value=76 Score=27.68 Aligned_cols=35 Identities=9% Similarity=0.041 Sum_probs=30.5
Q ss_pred ceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 312 RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 312 r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
...|.|.|.. ++.+|+.. ..+.|.|++.|+.+++.
T Consensus 106 ~~~F~I~Tp~-RtY~~~d~-~~~AqeWv~aI~~~~~~ 140 (151)
T 1w1g_A 106 FKTFFVHTPN-RTYYLMDP-SGNAHKWCRKIQEVWRQ 140 (151)
T ss_dssp SSEEEEEETT-EEEEEECT-TSCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-ceEEEEcC-ccCHHHHHHHHHHHHHH
Confidence 3489999999 99999885 88999999999999854
No 68
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=51.86 E-value=1.3e+02 Score=28.15 Aligned_cols=37 Identities=11% Similarity=0.040 Sum_probs=28.6
Q ss_pred eeEEEeec-ccceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 313 RYFGLKTV-LRGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 313 ~YFglkTa-~~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
.-|-|.+. ....++|-|.|..+++.|.+.|+..+...
T Consensus 300 ~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 337 (406)
T 2vrw_B 300 HMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNI 337 (406)
T ss_dssp EEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 45666543 23569999999999999999999887543
No 69
>4asv_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; chaperone, membrane, tail-anchored, post-translational targe; NMR {Saccharomyces cerevisiae} PDB: 4asw_A
Probab=50.06 E-value=8 Score=31.72 Aligned_cols=34 Identities=35% Similarity=0.629 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHcCCCchhHHHhh-hhhhccccCCchh
Q 018315 128 VAAQCVETAEAMGAEREHLAAVV-SSAVNVRSAGDIM 163 (358)
Q Consensus 128 vAaqCvE~AE~~GA~rd~vasaV-~SAV~vrs~gDim 163 (358)
||-||+| |+.|-+.+....+| ..++..++.-+|.
T Consensus 49 VAIqCI~--~AF~Vd~~D~~~~v~~~~~g~q~L~eIf 83 (92)
T 4asv_A 49 VAMDCIS--EAFGFEREAVSGILGKSEFKGQHLADIL 83 (92)
T ss_dssp HHHHHHH--HHHTCCGGGHHHHHHHSSBTTCCHHHHH
T ss_pred HHHHHHH--HHhCCCchhhhHHHhhhccCCCCHHHHH
Confidence 7889998 88999999999899 8888877766665
No 70
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=48.74 E-value=14 Score=30.93 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=60.0
Q ss_pred eeecCCCceeEEEEEEEEcCccEEEEEeeccccccccccccceE--EEeeccCCCCCCCcccccCCCcceeEEEeecccc
Q 018315 246 LKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNV--VLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRG 323 (358)
Q Consensus 246 lkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~V--V~dV~~~ipAWpgr~l~e~~e~r~YFglkTa~~G 323 (358)
++...+|.++|+-++ .+||||+- |. .++.|-.|. |-.|....|.=|.=+++++..+.-||-|+..+ |
T Consensus 7 i~~~~~g~~rFrLka----~NgeiI~s--Se----~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka~N-g 75 (118)
T 2k49_A 7 LSKSSNDQFKFVLKA----GNGEVILT--SE----LYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAAN-H 75 (118)
T ss_dssp EEECTTSCEEEEEEC----SSSCEEEE--CC----CBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEECTT-C
T ss_pred EEEcCCCCEEEEEEE----CCCCEEEE--CC----CcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEcCC-C
Confidence 345678999998764 68999993 33 255544332 23334444432333445566789999999988 7
Q ss_pred eEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 324 VVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 324 vvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
-|--.-+....++.=..||+.+...+
T Consensus 76 qvIg~Se~Y~s~~~~~~gI~sVk~na 101 (118)
T 2k49_A 76 QIIGTSQMYSSTAARDNGIKSVMENG 101 (118)
T ss_dssp CEEEEBCCCSSHHHHHHHHHHHHHHT
T ss_pred cEEEEcCCcCCHHHHHHHHHHHHHhC
Confidence 66666665667777778888776543
No 71
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=47.61 E-value=1e+02 Score=27.65 Aligned_cols=37 Identities=11% Similarity=0.156 Sum_probs=29.0
Q ss_pred ceeEEEeec----ccceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 312 RRYFGLKTV----LRGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 312 r~YFglkTa----~~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
.+-|.|... ....+.|.|.|..+++.|.+.|+..+..
T Consensus 269 ~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 269 PCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp TTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence 455777652 2256999999999999999999988754
No 72
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=46.14 E-value=50 Score=35.75 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=55.7
Q ss_pred hhhHhhhcceeeeecCCCceeEEEEEEEEcCccEEEEEeecc--ccccccccccceEEEeecc--CCCCCCCcccccCCC
Q 018315 235 SRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR--HVAGTITKKKKNVVLEVIP--DMPAWPGRHLLEGGE 310 (358)
Q Consensus 235 ~~~~larG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSk--Hv~GAfsKKKK~VV~dV~~--~ipAWpgr~l~e~~e 310 (358)
+++++ +.|+|.+.+++ +.+.+|+=.+-=|+.|-+++ .+.|. ...++++.+... ++- =.+..++.+
T Consensus 441 ~r~Li-~eG~l~~~~~k-----~~r~~FLF~D~Ll~~K~~~~~~~~~g~--~~~~y~~k~~i~L~~l~---V~~~~d~~~ 509 (1049)
T 3ksy_A 441 CNEFI-MEGTLTRVGAK-----HERHIFLFDGLMICCKSNHGQPRLPGA--SNAEYRLKEKFFMRKVQ---INDKDDTNE 509 (1049)
T ss_dssp CSCCC-CEEEEEETTCS-----SCEEEEEETTEEEEEECCTTCCCCTTS--CCCSCCCCCEECCSSCC---CCCCCCSSS
T ss_pred cceEE-EeceEEEEccC-----ceEEEEeeCCeEEEEEecCccCCCCCC--CCCceEEEEEEEcCceE---EEECCCCcc
Confidence 34444 45677776644 45556665555666676643 23331 111122211110 000 001111212
Q ss_pred cceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 311 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 311 ~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
...-|-|...+...+.|.|.|..+++.|.+.|+.+-..+
T Consensus 510 ~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k~ 548 (1049)
T 3ksy_A 510 YKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYRS 548 (1049)
T ss_dssp CCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 345677766653489999999999999999998765433
No 73
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=46.06 E-value=1.5e+02 Score=27.65 Aligned_cols=24 Identities=17% Similarity=0.313 Sum_probs=21.8
Q ss_pred ceEEEEeCCchhHhhHHHHHHHHH
Q 018315 323 GVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 323 GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
....|.|+|..+.+.|++.|+..+
T Consensus 304 r~y~l~A~s~ee~~~Wi~aI~~ai 327 (347)
T 2r09_A 304 VVYRISAPSPEEKEEWMKSIKASI 327 (347)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHHHHH
Confidence 678899999999999999999865
No 74
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=45.98 E-value=25 Score=29.61 Aligned_cols=101 Identities=10% Similarity=0.205 Sum_probs=62.1
Q ss_pred hHhhhcceeeeecCCCceeEEEEEEEEcCccEEEEEeeccccccccccccceEEEeeccCCCCCCCcccccCC-CcceeE
Q 018315 237 ELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGG-EDRRYF 315 (358)
Q Consensus 237 ~~larG~eLlkrtrkG~lhwk~VSVyink~~qV~LKmKSkHv~GAfsKKKK~VV~dV~~~ipAWpgr~l~e~~-e~r~YF 315 (358)
+++..+..+++..+.+..+=|-+-+|.+ -=++++-.++ + ..|.=|-|--+.++.-. ..|+. +.+..|
T Consensus 27 ~ii~~s~v~~~~~~~~~~~eR~l~LF~~--~Ll~~s~~~~-~-~~f~~kgklPL~g~~V~--------~~ed~~~~~~aF 94 (132)
T 1v61_A 27 NVIFMSQVVMQHGACEEKEERYFLLFSS--VLIMLSASPR-M-SGFMYQGKIPIAGMVVN--------RLDEIEGSDCMF 94 (132)
T ss_dssp CCSCEEEEEBCCSSSSCCCEEEEEECSS--CEEEEECSSS-S-SCCEEEEEECTTTCBCS--------TTCSSSSSCCCE
T ss_pred CeEEEeeEEEEEcccCcceEEEEEEcCC--eEEEEEecCC-C-ceEEEEEEEecceeEEE--------eccccccCccEE
Confidence 5556667777777777777777777764 3556665443 1 13443333333333322 12232 345677
Q ss_pred EEeecccceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 316 GLKTVLRGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 316 glkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
=|.-.....|.|-|.|+.+++.|.+.++.+...+
T Consensus 95 eI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~~ 128 (132)
T 1v61_A 95 EITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSG 128 (132)
T ss_dssp EEECSSSCEEEECCCCSHHHHHHHHHHHHHHTTS
T ss_pred EEecCCCceEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 6654443679999999999999999998876543
No 75
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=44.11 E-value=1.1e+02 Score=23.49 Aligned_cols=25 Identities=20% Similarity=0.345 Sum_probs=22.4
Q ss_pred eEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 324 VVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 324 vvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
.+.|.|++..+.+.|++.|+..+..
T Consensus 105 ~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 105 KNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999987754
No 76
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=43.65 E-value=63 Score=29.43 Aligned_cols=38 Identities=24% Similarity=0.298 Sum_probs=32.1
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
.....|-|.|.+ +...|.|+|..+.+.|++.|+..+.-
T Consensus 76 ~~~~~F~I~t~~-rty~l~A~se~e~~~Wi~aL~~~~~~ 113 (264)
T 1qqg_A 76 KNKHLVALYTRD-EHFAIAADSEAEQDSWYQALLQLHNR 113 (264)
T ss_dssp SCSSEEEEEESS-CEEEEECSSHHHHHHHHHHHHHHC--
T ss_pred CCCcEEEEEECC-EEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 356789999987 89999999999999999999987643
No 77
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=42.79 E-value=44 Score=27.09 Aligned_cols=23 Identities=13% Similarity=0.291 Sum_probs=20.6
Q ss_pred EEEEeCCchhHhhHHHHHHHHHH
Q 018315 325 VEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 325 vEFec~s~~~~q~W~~gI~~lL~ 347 (358)
..|.|+|+.+.+.|++.|+..+.
T Consensus 102 ~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 102 LIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp CEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEECCCHHHHHHHHHHHHHHHh
Confidence 67999999999999999997664
No 78
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=36.63 E-value=2.8e+02 Score=26.29 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=27.8
Q ss_pred ceeEEEeecc-cceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 312 RRYFGLKTVL-RGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 312 r~YFglkTa~-~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
..-|-|.... ...+.|-|.|..+++.|.+.|+.....
T Consensus 404 ~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~ 441 (466)
T 2pz1_A 404 KNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQ 441 (466)
T ss_dssp CEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 3557676543 246889999999999999999886543
No 79
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=36.26 E-value=1.1e+02 Score=28.27 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=28.4
Q ss_pred ceeEEEeecc----cceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 312 RRYFGLKTVL----RGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 312 r~YFglkTa~----~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
.+-|-|.... ...+.|.|.|..+++.|.+.|+..+..
T Consensus 279 ~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 279 PCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp TTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 4567665421 246889999999999999999998743
No 80
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=35.03 E-value=28 Score=30.53 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=28.7
Q ss_pred cceeEEEeecccceEEEEeCCchhHhhHHHHHHH
Q 018315 311 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVAR 344 (358)
Q Consensus 311 ~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~ 344 (358)
...-|-|.|.+ +++.|.+++..+.+.|...||.
T Consensus 194 ~~~~f~iit~~-r~~~~~a~s~~e~~~Wi~~lq~ 226 (228)
T 3tfm_A 194 RPNSFVIITAN-RVLHCNADTPEEMHHWITLLQR 226 (228)
T ss_dssp CTTEEEEEETT-EEEEEECSSHHHHHHHHHHHCS
T ss_pred CCCcEEEEeCC-ceEEEEcCCHHHHHHHHHHHhh
Confidence 45578888888 9999999999999999999874
No 81
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=34.52 E-value=57 Score=25.98 Aligned_cols=35 Identities=9% Similarity=0.110 Sum_probs=29.4
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARL 345 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~l 345 (358)
+....|=|.+.+ .+.-|.++|+.+.+.|++.|+..
T Consensus 70 ~~~~~Fki~~~~-~~y~f~A~s~e~~~~Wl~al~~A 104 (112)
T 2coc_A 70 DSGHVWKLQWAK-QSWYLSASSAELQQQWLETLSTA 104 (112)
T ss_dssp SSSEEEEEEETT-EEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCC-eEEEEEcCCHHHHHHHHHHHHHH
Confidence 356788887776 68999999999999999988763
No 82
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=33.35 E-value=3.1e+02 Score=25.73 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=27.3
Q ss_pred eeEEEeecc-cceEEEEeCCchhHhhHHHHHHHHHHH
Q 018315 313 RYFGLKTVL-RGVVEFECRSQREYDIWTQGVARLLNV 348 (358)
Q Consensus 313 ~YFglkTa~-~GvvEFec~s~~~~q~W~~gI~~lL~~ 348 (358)
.-|-|.... ...+.|-|.|..+++.|.+.|+.....
T Consensus 328 ~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~ 364 (402)
T 2dfk_A 328 NAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKM 364 (402)
T ss_dssp SEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 457666543 246899999999999999999875543
No 83
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=32.38 E-value=2.6e+02 Score=27.77 Aligned_cols=37 Identities=11% Similarity=0.065 Sum_probs=27.1
Q ss_pred eeEEEeecc-cceEEEEeCCchhHhhHHHHHHHHHHHH
Q 018315 313 RYFGLKTVL-RGVVEFECRSQREYDIWTQGVARLLNVA 349 (358)
Q Consensus 313 ~YFglkTa~-~GvvEFec~s~~~~q~W~~gI~~lL~~~ 349 (358)
.-|-|.+.+ ...++|-|.|..+++.|.+.|+..+...
T Consensus 472 ~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~ 509 (587)
T 3ky9_A 472 HMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNI 509 (587)
T ss_dssp EEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence 345555543 2469999999999999999999988544
No 84
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=29.89 E-value=59 Score=27.06 Aligned_cols=83 Identities=18% Similarity=0.264 Sum_probs=48.4
Q ss_pred eEEEEEEEEcCccEEEEEeecccccccccc--ccc-eEEEeeccCCCCCCCcccccCCCcceeEEEeecccce-EEEEeC
Q 018315 255 HWKIVSVYINRLNQVMLKMKSRHVAGTITK--KKK-NVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRGV-VEFECR 330 (358)
Q Consensus 255 hwk~VSVyink~~qV~LKmKSkHv~GAfsK--KKK-~VV~dV~~~ipAWpgr~l~e~~e~r~YFglkTa~~Gv-vEFec~ 330 (358)
-|+.-=|.|. |+-++=-+.+.+.|.=.. +++ +=++.+..- -=+ +.|..++.-.|=|.+.+.|. -.|.++
T Consensus 23 sWkr~W~vL~--g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~----~V~-~~e~~~~~~~F~L~~~~~G~~Y~fqA~ 95 (126)
T 2dtc_A 23 SWTRYWVVLS--GATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGW----MVQ-LPDDPEHPDIFQLNNPDKGNVYKFQTG 95 (126)
T ss_dssp CCEEEEEEEE--TTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTC----EEE-CCCCTTSTTEEEEECTTSCSEEEEECS
T ss_pred CcccEEEEEe--CCEEEEEcccccccccccccccCCCceEEeCCC----EEE-ecCCCCCCCEEEEeeCCCCCEEEEeCC
Confidence 5888777774 333444555555442110 111 112222221 111 22333456789999885465 889999
Q ss_pred CchhHhhHHHHHHH
Q 018315 331 SQREYDIWTQGVAR 344 (358)
Q Consensus 331 s~~~~q~W~~gI~~ 344 (358)
|+.+...|.+.|+.
T Consensus 96 s~~~~~~W~~ai~~ 109 (126)
T 2dtc_A 96 SRFHAILWHKHLDD 109 (126)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999999987
No 85
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=29.45 E-value=2.1e+02 Score=22.70 Aligned_cols=96 Identities=15% Similarity=0.120 Sum_probs=53.5
Q ss_pred cceeeeecCCCcee--EEEEEEEEcCccEEEE-Eeec----cccccccccccceEEEeeccC--CCCCCCcccccCCCcc
Q 018315 242 GCELLKRTRKGDLH--WKIVSVYINRLNQVML-KMKS----RHVAGTITKKKKNVVLEVIPD--MPAWPGRHLLEGGEDR 312 (358)
Q Consensus 242 G~eLlkrtrkG~lh--wk~VSVyink~~qV~L-KmKS----kHv~GAfsKKKK~VV~dV~~~--ipAWpgr~l~e~~e~r 312 (358)
.|-|.+--+.|..+ |+.--+.+... .+.+ +.+. ...-|.|--.+-.-|..|-.+ +++ +..+-.
T Consensus 4 eGwl~~pk~~~~~k~~Wkkr~~vL~~~-kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~-------~~~~~p 75 (117)
T 2rov_A 4 EGWLSLPVRNNTKKFGWVKKYVIVSSK-KILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRA-------DAKEIP 75 (117)
T ss_dssp EEEEECCCCSSSSCCCCCEEEEEEETT-EEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSS-------CTTTGG
T ss_pred EEEEEeecCCCccCCCcEEEEEEEECC-EEEEEECCCCcccCCceEEEECcccEEEEEccccccccc-------ccccCC
Confidence 45555522445444 88888877543 3333 2221 133344443333333333222 222 111345
Q ss_pred eeEEEeecc-----cceEEEEeCCchhHhhHHHHHHHH
Q 018315 313 RYFGLKTVL-----RGVVEFECRSQREYDIWTQGVARL 345 (358)
Q Consensus 313 ~YFglkTa~-----~GvvEFec~s~~~~q~W~~gI~~l 345 (358)
+-|-|.+.+ .+.+-|.++|..+++.|+..|...
T Consensus 76 ~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~ 113 (117)
T 2rov_A 76 RIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKK 113 (117)
T ss_dssp GEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHH
Confidence 678887642 368999999999999999988754
No 86
>2l1q_A Liver-expressed antimicrobial peptide 2; polypeptide, disulfides, antimicrobial protein, LEAP-2; NMR {Homo sapiens}
Probab=29.28 E-value=12 Score=26.65 Aligned_cols=18 Identities=33% Similarity=0.831 Sum_probs=14.0
Q ss_pred CCCcccchhhh----hhhccCC
Q 018315 1 MSNHWRWFSVQ----FCRNNNN 18 (358)
Q Consensus 1 ~~~~~~~~~~~----~~~~~~~ 18 (358)
|...||+.|.+ |||+++.
T Consensus 1 MTP~WR~vs~kP~GA~Crd~~E 22 (40)
T 2l1q_A 1 MTPFWRGVSLRPIGASCRDDSE 22 (40)
T ss_dssp CCCTTSSCSSBCTTSBCSSGGG
T ss_pred CcchhhhhcCCccchhhccchh
Confidence 78899999875 7777654
No 87
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=29.12 E-value=3e+02 Score=24.89 Aligned_cols=35 Identities=6% Similarity=0.187 Sum_probs=26.5
Q ss_pred ceeEEEeec---ccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 312 RRYFGLKTV---LRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 312 r~YFglkTa---~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
...|-|... ....+.|-|.|..+++.|.+.|+..+
T Consensus 308 ~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 308 KNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp SSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 345777542 23578999999999999999998753
No 88
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=27.21 E-value=48 Score=28.80 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=31.5
Q ss_pred CcceeEEEeecccceEEEEeCCchhHhhHHHHHHHHH
Q 018315 310 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 346 (358)
Q Consensus 310 e~r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL 346 (358)
+..--|.|||.++-.+-||.+|..+...|++.|+.=+
T Consensus 93 D~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~ 129 (136)
T 1v5m_A 93 EKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCV 129 (136)
T ss_dssp CCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHH
T ss_pred CccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhc
Confidence 4567799999995579999999999999999997644
No 89
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=27.18 E-value=52 Score=29.51 Aligned_cols=36 Identities=28% Similarity=0.454 Sum_probs=30.5
Q ss_pred ceeEEEeecccceEEEEeCCchhHhhHHHHHHHHHH
Q 018315 312 RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 347 (358)
Q Consensus 312 r~YFglkTa~~GvvEFec~s~~~~q~W~~gI~~lL~ 347 (358)
.++|-|--.....+.|-+.|...+-.|++|+.-||.
T Consensus 115 ~laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~Llg 150 (203)
T 3a98_B 115 ELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLG 150 (203)
T ss_dssp GGEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHTT
T ss_pred ceEEEEecCCCceEEEecCCHHHHHHHHHHHHHHhc
Confidence 479977655545899999999999999999999874
No 90
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=21.10 E-value=1.3e+02 Score=26.29 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=27.4
Q ss_pred CcceeEEEeecc-----cceEEEEeCCchhHhhHHHHHH
Q 018315 310 EDRRYFGLKTVL-----RGVVEFECRSQREYDIWTQGVA 343 (358)
Q Consensus 310 e~r~YFglkTa~-----~GvvEFec~s~~~~q~W~~gI~ 343 (358)
+..-.|.|+|.+ +.+.-|-|+|..+.+.|++.|.
T Consensus 234 ~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air 272 (291)
T 3tca_A 234 PTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIR 272 (291)
T ss_dssp SSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHH
Confidence 345679998754 3568899999999999999996
No 91
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=20.64 E-value=1.1e+02 Score=26.99 Aligned_cols=46 Identities=17% Similarity=0.281 Sum_probs=31.9
Q ss_pred hhhcceeeeecCCCceeEEEEEEEEcCc---cEEEEEeeccccccccccccceEEE
Q 018315 239 LARGCELLKRTRKGDLHWKIVSVYINRL---NQVMLKMKSRHVAGTITKKKKNVVL 291 (358)
Q Consensus 239 larG~eLlkrtrkG~lhwk~VSVyink~---~qV~LKmKSkHv~GAfsKKKK~VV~ 291 (358)
|.+|.-+.. +|. .|+.|.+-..|. |+-.+++|=|+| ||.++--.++
T Consensus 34 lrkG~~I~i---dG~-P~~Vve~~~~KpGKhG~A~vr~k~knl---~TGk~~E~tf 82 (167)
T 3hks_A 34 IRKGGHIVI---KNR-PCKVVEVSTSKTGKHGHAKCHFVAIDI---FTAKKLEDIV 82 (167)
T ss_dssp CCTTSEEEE---TTE-EEEEEEEEEECSSTTCCCEEEEEEEET---TTCCEEEEEE
T ss_pred ccCCCEEEE---CCE-EEEEEEEEEeCCCCCCceEEEEEEEEc---CCCCEEEEEE
Confidence 566665543 554 588888866654 558888888898 8877665544
No 92
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=20.61 E-value=1.4e+02 Score=22.67 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=23.6
Q ss_pred eeeeecCCCceeEEEEEEEEcCc------cEEEEEeecc
Q 018315 244 ELLKRTRKGDLHWKIVSVYINRL------NQVMLKMKSR 276 (358)
Q Consensus 244 eLlkrtrkG~lhwk~VSVyink~------~qV~LKmKSk 276 (358)
+..-++++|...|-.+++-+-+. -..++|||+-
T Consensus 70 e~r~~~kdG~~~wve~~~~~v~~~~~~~~r~~~~~~~~~ 108 (111)
T 2vlg_A 70 TFRFIKKDHTIVWVEAAVEIVTTRAERTEREIILKMKVL 108 (111)
T ss_dssp EEEEECTTSCEEEEEEEEEEC-------CCCEEEEEEEC
T ss_pred EEEEEcCCCCEEEEEEEEEEEecccCCceEEEEEEEEEe
Confidence 55667899999998887655332 2489999973
No 93
>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*
Probab=20.25 E-value=75 Score=26.91 Aligned_cols=41 Identities=24% Similarity=0.282 Sum_probs=31.0
Q ss_pred cchhhhhhhhHHHhHHHHhhhhhhhhhHHh-----HHHHHHHHHHH
Q 018315 58 KTVGRWLKDRREKKKEEARVHNAQLHAAIT-----VAGVAAAVAAI 98 (358)
Q Consensus 58 ~tvgrWlk~~k~KKKEe~R~~nAqvHAAVS-----VAgVAAAvAAv 98 (358)
..|-.=|+.+++.-+++.|..|+++.+|+. =-.|.+||--+
T Consensus 30 eaie~~fa~~r~~le~emRaan~~La~ai~~~~~~~p~V~aaid~~ 75 (118)
T 2y39_A 30 ELKEDAFAQRRREIETRLRAANGKLADAIAKNPAWSPEVEAATQEV 75 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHH
Confidence 356666888888999999999999998885 35566655444
Done!