Query 018316
Match_columns 358
No_of_seqs 351 out of 1578
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 07:58:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018316.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018316hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0698 Serine/threonine prote 100.0 7.2E-41 1.6E-45 323.2 24.2 216 1-276 88-309 (330)
2 PLN03145 Protein phosphatase 2 100.0 2.8E-38 6E-43 307.5 25.5 184 65-273 138-332 (365)
3 PF00481 PP2C: Protein phospha 100.0 5.5E-38 1.2E-42 292.9 14.0 175 65-263 70-254 (254)
4 KOG0697 Protein phosphatase 1B 100.0 1.3E-36 2.8E-41 274.9 20.0 187 63-274 94-294 (379)
5 PTZ00224 protein phosphatase 2 100.0 6.2E-35 1.3E-39 285.1 23.5 175 69-273 85-273 (381)
6 COG0631 PTC1 Serine/threonine 100.0 4.5E-32 9.8E-37 254.0 19.7 174 66-274 80-255 (262)
7 KOG0700 Protein phosphatase 2C 100.0 4.3E-32 9.3E-37 258.7 16.7 229 2-250 113-377 (390)
8 KOG0699 Serine/threonine prote 100.0 1.1E-31 2.4E-36 250.5 14.6 167 89-273 327-505 (542)
9 PRK14559 putative protein seri 100.0 2.3E-28 5E-33 251.5 21.6 178 65-275 457-639 (645)
10 cd00143 PP2Cc Serine/threonine 100.0 1.1E-27 2.5E-32 221.1 21.7 181 63-270 68-254 (254)
11 smart00332 PP2Cc Serine/threon 100.0 2.2E-27 4.7E-32 220.0 23.1 177 65-268 73-255 (255)
12 KOG1323 Serine/threonine phosp 99.9 2.5E-25 5.5E-30 206.2 18.6 209 58-274 212-490 (493)
13 KOG0618 Serine/threonine phosp 99.8 3.1E-19 6.8E-24 184.6 13.7 201 2-273 565-774 (1081)
14 KOG1379 Serine/threonine prote 99.7 7.1E-16 1.5E-20 143.5 17.0 139 91-269 166-329 (330)
15 smart00331 PP2C_SIG Sigma fact 99.4 1.3E-11 2.8E-16 110.0 15.0 123 70-248 66-192 (193)
16 PF13672 PP2C_2: Protein phosp 99.3 2.9E-11 6.2E-16 109.3 12.2 101 88-233 93-194 (212)
17 TIGR02865 spore_II_E stage II 99.1 1.2E-09 2.7E-14 116.4 16.4 137 72-270 618-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.1 9E-09 2E-13 91.3 17.0 142 71-271 41-193 (193)
19 COG2208 RsbU Serine phosphatas 97.8 0.0013 2.7E-08 64.8 17.2 141 73-271 215-366 (367)
20 PF05785 CNF1: Rho-activating 36.2 42 0.00091 31.8 3.6 24 90-114 130-153 (281)
21 COG3700 AphA Acid phosphatase 32.9 75 0.0016 28.3 4.4 42 209-250 73-129 (237)
22 PF09436 DUF2016: Domain of un 26.2 40 0.00087 25.2 1.4 22 202-224 22-44 (72)
No 1
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-41 Score=323.24 Aligned_cols=216 Identities=38% Similarity=0.518 Sum_probs=190.0
Q ss_pred ChhhHHHhhccHHHHHHHHhcCCCccccccCCCCcccccccccccccccccCCCCCCCCcchhHHHHHHHHHHHH-HHHH
Q 018316 1 MVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFK-LMDK 79 (358)
Q Consensus 1 ~va~~v~~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~-~~~~ 79 (358)
.+|+|++++||..|..++...... ..+++++.++|. ++|.
T Consensus 88 ~~A~~~~~~L~~~l~~~~~~~~~~---------------------------------------~~~~~a~~~~F~~~~D~ 128 (330)
T KOG0698|consen 88 LAAKFAAKHLHKNLLEQLAFPKDR---------------------------------------QDVKDALRRAFLTKTDS 128 (330)
T ss_pred HHHHHHHHHHHHHHHhhhhcccch---------------------------------------HHHHHHHHHHHHHHHHH
Confidence 379999999999999988843110 468899999999 6999
Q ss_pred HHhhCCCCCccCCcceEEEEEEECC-eEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHHHHHHHhcCCeEeecc
Q 018316 80 ELKLHPAIDCFCSGTTAVTLVKQGP-DIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQ 158 (358)
Q Consensus 80 ~l~~~~~~~~~~~GtTavv~li~~~-~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~ 158 (358)
.+... ..+...+|||++++++..+ +|||||+|||||+|+++++ .+++||.||+|..+.|+.||..+||+|..+.
T Consensus 129 ~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~----~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~ 203 (330)
T KOG0698|consen 129 EFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGG----VAVQLSVDHKPDREDERERIEAAGGRVSNWG 203 (330)
T ss_pred HHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCC----eeeeCCCCCCCCcHHHHHHHHHcCCEEEEcC
Confidence 99865 2224578888888888755 9999999999999998753 4999999999999999999999999998765
Q ss_pred CCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc----CC
Q 018316 159 DEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVAS----AP 234 (358)
Q Consensus 159 ~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd~ls~~ei~~iv~~----~~ 234 (358)
+ ++|| +|.|++||+|||+.+|..+++++|++....+++.|+|||||||||||+|+++|++++++. ..
T Consensus 204 ~---~~Rv------~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~ 274 (330)
T KOG0698|consen 204 G---VWRV------NGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASIS 274 (330)
T ss_pred C---cceE------eceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccc
Confidence 4 6788 679999999999999977799999999999999999999999999999999999999999 56
Q ss_pred CHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEecCCCCC
Q 018316 235 SQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSAV 276 (358)
Q Consensus 235 ~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~~~~~~ 276 (358)
.+..++..|...|..+ ++.||||||||+|......
T Consensus 275 ~~~~a~~~l~~~a~~~-------~s~DnitvvvV~l~~~~~~ 309 (330)
T KOG0698|consen 275 SPLAAAKLLATEALSR-------GSKDNITVVVVRLKSSPKS 309 (330)
T ss_pred cHHHHHHHHHHHHhhc-------CCCCCeEEEEEEecCcccc
Confidence 8999999999999999 9999999999999886543
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.8e-38 Score=307.53 Aligned_cols=184 Identities=32% Similarity=0.545 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCC-CccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHH
Q 018316 65 PLKKSMLKSFKLMDKELKLHPAI-DCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPRE 143 (358)
Q Consensus 65 ~l~~al~~a~~~~~~~l~~~~~~-~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E 143 (358)
.+.++|.++|.++++.+.+.... ....||||++++++.++++|||||||||||+++.+. ++|||+||++.++.|
T Consensus 138 ~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~-----~~~LT~DH~~~~~~E 212 (365)
T PLN03145 138 EIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGK-----AIEMSRDHKPMCSKE 212 (365)
T ss_pred hHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCe-----EEEecCCCCCCCHHH
Confidence 46677888888888888654322 244699999999999999999999999999999875 999999999999999
Q ss_pred HHHHHhcCCeEeeccCCCcceEEeccCCCCCCccccccccccccccC------CccccceEEEEEcCCCCeEEEEEcCCC
Q 018316 144 AARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDF------GLISVPDIYYRRLTEKDEFIILATDGV 217 (358)
Q Consensus 144 ~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~------gv~~~Pdi~~~~l~~~d~flILaSDGl 217 (358)
+.||...||.|.. .|+ .|.+.+||||||+.+|.. +++++|++..++|+++|.|||||||||
T Consensus 213 ~~RI~~~Gg~v~~-------g~v------~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGL 279 (365)
T PLN03145 213 RKRIEASGGYVYD-------GYL------NGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGI 279 (365)
T ss_pred HHHHHHcCCceec-------ceE------CCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCcc
Confidence 9999999998853 233 677899999999988753 378999999999999999999999999
Q ss_pred CCCCCHHHHHHHHH----cCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEecCC
Q 018316 218 WDVISNKEAVEIVA----SAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHS 273 (358)
Q Consensus 218 wd~ls~~ei~~iv~----~~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~~~ 273 (358)
||+|+++++++++. ...+++.+|+.|++.|+.+ |+.||||||||+|...
T Consensus 280 wdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r-------gs~DNITvIVV~l~~~ 332 (365)
T PLN03145 280 WDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR-------KSGDNLAVVVVCFQSQ 332 (365)
T ss_pred ccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-------CCCCCEEEEEEEeecC
Confidence 99999999877664 3468999999999999999 9999999999999974
No 3
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=5.5e-38 Score=292.90 Aligned_cols=175 Identities=41% Similarity=0.585 Sum_probs=144.9
Q ss_pred HHHHHHHHHHHH-HHHHHhhCCCC-CccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEE-EcCCCCCCCCH
Q 018316 65 PLKKSMLKSFKL-MDKELKLHPAI-DCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAV-QLTVDLKPDLP 141 (358)
Q Consensus 65 ~l~~al~~a~~~-~~~~l~~~~~~-~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~-qLT~DH~~~~~ 141 (358)
.+.++|..+|.. +++.+...... ....+|||++++++.++++||||||||||||++.+. .. +||+||+|.++
T Consensus 70 ~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~-----~~~~Lt~dH~~~~~ 144 (254)
T PF00481_consen 70 DIEEALRQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGG-----IIKQLTRDHKPSNP 144 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTE-----EEEESS---STTSH
T ss_pred chhhcccceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccc-----cccccccccccchh
Confidence 467777778887 77777652110 355899999999999999999999999999999986 55 99999999999
Q ss_pred HHHHHHHhcCCeEeeccCCCcceEEeccCCCCCCcccccccccccccc---CCccccceEEEEEcCCCCeEEEEEcCCCC
Q 018316 142 REAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKD---FGLISVPDIYYRRLTEKDEFIILATDGVW 218 (358)
Q Consensus 142 ~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~---~gv~~~Pdi~~~~l~~~d~flILaSDGlw 218 (358)
.|+.||+..||.+.. ..|+ .+.|++||||||..+|+ .+++++|+|..++++++|+||||||||||
T Consensus 145 ~E~~RI~~~gg~v~~------~~rv------~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlw 212 (254)
T PF00481_consen 145 DERERIRKAGGRVSE------NGRV------NGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLW 212 (254)
T ss_dssp HHHHHHHHTT-GEEE------TEEE------TTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHH
T ss_pred hccceeecccccccc------chhh------hhccccccccccccccccccceeeeecccccccccccceEEEEEccccc
Confidence 999999999998864 3566 78899999999999999 67999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCC----HHHHHHHHHHHHHHhccccCCCCCCCcE
Q 018316 219 DVISNKEAVEIVASAPS----QATAARALVDWAVRSWKLKYPTSKNDDC 263 (358)
Q Consensus 219 d~ls~~ei~~iv~~~~~----~~~aA~~Lv~~A~~~~~~~~~~g~~DNi 263 (358)
|+|+++|+++++....+ ++.+|+.|++.|+++ |+.|||
T Consensus 213 d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~-------gs~DNi 254 (254)
T PF00481_consen 213 DVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIAR-------GSKDNI 254 (254)
T ss_dssp TTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHT-------THHSHE
T ss_pred ccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc-------CCCCCC
Confidence 99999999999998754 899999999999999 999997
No 4
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=274.90 Aligned_cols=187 Identities=34% Similarity=0.514 Sum_probs=168.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCCC--CccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCC
Q 018316 63 YLPLKKSMLKSFKLMDKELKLHPAI--DCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDL 140 (358)
Q Consensus 63 ~~~l~~al~~a~~~~~~~l~~~~~~--~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~ 140 (358)
.+.+++.|+..|.++|+.++..... ...++||||+++++...++|++|+||||++++|++. ++.-|+||+|.+
T Consensus 94 v~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~-----~~f~TqDHKP~~ 168 (379)
T KOG0697|consen 94 VENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGE-----VVFSTQDHKPYL 168 (379)
T ss_pred HHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCc-----eEEeccCCCCCC
Confidence 3568889999999999988765422 244699999999999999999999999999999986 888999999999
Q ss_pred HHHHHHHHhcCCeEeeccCCCcceEEeccCCCCCCccccccccccccccCC--------ccccceEEEEEcCCCCeEEEE
Q 018316 141 PREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFG--------LISVPDIYYRRLTEKDEFIIL 212 (358)
Q Consensus 141 ~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~g--------v~~~Pdi~~~~l~~~d~flIL 212 (358)
|.|++||+.+||.|+. .|| +|.|+++|||||+.+|..+ |.++|+|..+.-...|+||||
T Consensus 169 p~EkeRIqnAGGSVMI-------qRv------NGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivl 235 (379)
T KOG0697|consen 169 PKEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVL 235 (379)
T ss_pred hHHHHHHhcCCCeEEE-------EEe------cceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEE
Confidence 9999999999999975 677 9999999999999999743 899999999988888889999
Q ss_pred EcCCCCCCCCHHHHHHHHHcC----CCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEecCCC
Q 018316 213 ATDGVWDVISNKEAVEIVASA----PSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSS 274 (358)
Q Consensus 213 aSDGlwd~ls~~ei~~iv~~~----~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~~~~ 274 (358)
|+|||||+|+++|+++++++. .++..++..+++.++-+ |++||+|+|++.|...+
T Consensus 236 ACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhK-------GSRDNMsivlvcfp~AP 294 (379)
T KOG0697|consen 236 ACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHK-------GSRDNMSIVLVCFPGAP 294 (379)
T ss_pred EccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhc-------cCccCceEEEEecCCCC
Confidence 999999999999999999884 68899999999999999 99999999999996543
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=6.2e-35 Score=285.11 Aligned_cols=175 Identities=36% Similarity=0.490 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHhhCCCCCccCCcceEEEEEEE-CCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHHHHHH
Q 018316 69 SMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQ-GPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARI 147 (358)
Q Consensus 69 al~~a~~~~~~~l~~~~~~~~~~~GtTavv~li~-~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri 147 (358)
.|..++..+|+.+..... .+|||++++++. +.+++||||||||+|+++.+. +++||+||++.++.|+.||
T Consensus 85 ~l~~a~~~~d~~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~-----~~~LT~DH~~~~~~E~~RI 155 (381)
T PTZ00224 85 RMEELCLEIDEEWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGK-----LVFATEDHKPNNPGERQRI 155 (381)
T ss_pred HHHHHHHHHHHHHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCE-----EEEcccCCCCCCHHHHhHH
Confidence 366777888887765432 459999988775 579999999999999999775 9999999999999999999
Q ss_pred HhcCCeEeeccCCCcceEEeccCCCCCCccccccccccccccCC--------ccccceEEEEEcCCCCeEEEEEcCCCCC
Q 018316 148 QQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFG--------LISVPDIYYRRLTEKDEFIILATDGVWD 219 (358)
Q Consensus 148 ~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~g--------v~~~Pdi~~~~l~~~d~flILaSDGlwd 219 (358)
...||.+.. .|+ .|.+.+||||||..+|..+ ++++|||..+.+.++| |||||||||||
T Consensus 156 ~~~gg~v~~-------~Rv------~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d 221 (381)
T PTZ00224 156 EACGGRVVS-------NRV------DGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFE 221 (381)
T ss_pred HHccCEecc-------ccc------cCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCc
Confidence 999997743 233 6778999999998776543 6789999999999998 99999999999
Q ss_pred -CCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEecCC
Q 018316 220 -VISNKEAVEIVAS----APSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHS 273 (358)
Q Consensus 220 -~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~~~ 273 (358)
+++++|+++++.. ..+++.+|+.|++.|+.+ |+.|||||||+++...
T Consensus 222 ~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~r-------Gs~DNITvIvV~~~~~ 273 (381)
T PTZ00224 222 GNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRR-------GSKDNISCLIVQLKDG 273 (381)
T ss_pred CccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc-------CCCCCEEEEEEEeeCC
Confidence 8999999999873 468999999999999999 9999999999999874
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-32 Score=254.02 Aligned_cols=174 Identities=30% Similarity=0.397 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHHHHHHhhCC--CCCccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHH
Q 018316 66 LKKSMLKSFKLMDKELKLHP--AIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPRE 143 (358)
Q Consensus 66 l~~al~~a~~~~~~~l~~~~--~~~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E 143 (358)
+.+.+.+++..+++.+.... ..+..+||||++++++.++++|+|||||||+||++++. ++|||.||++.+..+
T Consensus 80 ~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~-----~~~lT~DH~~~~~~~ 154 (262)
T COG0631 80 LEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGE-----LKQLTEDHSLVNRLE 154 (262)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCc-----eEEeccCCcHHHHHH
Confidence 45555556666666555443 24578999999999999999999999999999999986 999999999988888
Q ss_pred HHHHHhcCCeEeeccCCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCCCCCH
Q 018316 144 AARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISN 223 (358)
Q Consensus 144 ~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd~ls~ 223 (358)
+.|+...++.... +| ..++|||||+.. ..+|++....+.++| |||||||||||.+++
T Consensus 155 ~~~~~~~~~~~~~-------~~---------~~~ltralG~~~------~~~p~~~~~~~~~~d-~llL~SDGl~d~v~~ 211 (262)
T COG0631 155 QRGIITPEEARSH-------PR---------RNALTRALGDFD------LLEPDITELELEPGD-FLLLCSDGLWDVVSD 211 (262)
T ss_pred HhcCCCHHHHHhC-------cc---------chhhhhhcCCCc------ccceeEEEEEcCCCC-EEEEECCCCccCcCH
Confidence 8876554442211 11 128999999984 379999999999997 999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEecCCC
Q 018316 224 KEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSS 274 (358)
Q Consensus 224 ~ei~~iv~~~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~~~~ 274 (358)
+++++++....+++.+|+.|++.|+.+ |+.||+|++++.+....
T Consensus 212 ~~i~~il~~~~~~~~~~~~li~~a~~~-------g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 212 DEIVDILKNSETPQEAADKLIELALEG-------GGPDNITVVLVRLNGEG 255 (262)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHhc-------CCCCceEEEEEEeeccc
Confidence 999999998889999999999999998 99999999999987644
No 7
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.98 E-value=4.3e-32 Score=258.73 Aligned_cols=229 Identities=27% Similarity=0.310 Sum_probs=171.9
Q ss_pred hhhHHHhhccHHHHHHHHhcCCCccccccCCCCccccccccc---ccccccccCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 018316 2 VAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLS---MDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMD 78 (358)
Q Consensus 2 va~~v~~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~~ 78 (358)
.|+||.++|=..+..+|+.+.-..+. ....+....+ ...+|+.. +. .......+.++|.+||.+.+
T Consensus 113 as~~v~~~L~~~v~~~L~~~~~~~~~------~f~~e~~~~~~~~~~~~~~~~-~~----~~~~~~~v~~al~~Af~~te 181 (390)
T KOG0700|consen 113 ASRFLSDHLYPYVARELQGLLWQDEE------RFPSEYKSEELEHLLVYWKQL-SS----ADQRHGDVLEALSKAFEATE 181 (390)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhcc------ccccccccchhhhhhhhhhcc-cc----cCccchhHHHHHHHHHHHHH
Confidence 36888898888888888765222210 0000100011 11122211 11 01115678899999999999
Q ss_pred HHHhhC------CCCCccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCc-eEEEEcCCCCCCCCHHHHHHHHhcC
Q 018316 79 KELKLH------PAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNS-LVAVQLTVDLKPDLPREAARIQQCK 151 (358)
Q Consensus 79 ~~l~~~------~~~~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~-~~~~qLT~DH~~~~~~E~~Ri~~~g 151 (358)
+.+... .+.....||+||+++++.+..|||||+|||||+|+.....+. +.++|||.||+..+++|+.||+...
T Consensus 182 e~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eH 261 (390)
T KOG0700|consen 182 EDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRRIRSEH 261 (390)
T ss_pred HHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHHHHHhC
Confidence 988533 222367899999999999999999999999999999888777 6999999999999999999999865
Q ss_pred CeEeeccCCCcceEEeccC--CCCCCccccccccccccccCC--------------------ccccceEEEEEcCCCCeE
Q 018316 152 GRVFALQDEPEVARVWLPN--NDSPGLAMARAFGDFCLKDFG--------------------LISVPDIYYRRLTEKDEF 209 (358)
Q Consensus 152 g~v~~~~~~~~~~rv~~~~--~~~~~l~ltRalGd~~~k~~g--------------------v~~~Pdi~~~~l~~~d~f 209 (358)
- +-.-+.+.. |..|.|.+||||||..+|+.. ++++|.|+.++|++.|+|
T Consensus 262 P---------dd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkF 332 (390)
T KOG0700|consen 262 P---------DDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKF 332 (390)
T ss_pred C---------CCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeE
Confidence 3 111111111 338889999999999999621 899999999999999999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcC----CCHHHHHHHHHHHHHHh
Q 018316 210 IILATDGVWDVISNKEAVEIVASA----PSQATAARALVDWAVRS 250 (358)
Q Consensus 210 lILaSDGlwd~ls~~ei~~iv~~~----~~~~~aA~~Lv~~A~~~ 250 (358)
|||||||||++|+++|++++|.+. ..-+.+|+.||+.|+.+
T Consensus 333 LIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~ 377 (390)
T KOG0700|consen 333 LILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGR 377 (390)
T ss_pred EEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhh
Confidence 999999999999999999999984 33468999999999977
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=250.52 Aligned_cols=167 Identities=33% Similarity=0.488 Sum_probs=148.3
Q ss_pred ccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHHHHHHHhcCCeEeeccCCCcceEEec
Q 018316 89 CFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWL 168 (358)
Q Consensus 89 ~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~ 168 (358)
...+|||+||+++.+.+|||||.||||++++|.++ ++.++.||+|....|..||+.+||+|..
T Consensus 327 G~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~Gk-----AvdmS~DHKPEDevE~~RI~~AGG~vtl------------ 389 (542)
T KOG0699|consen 327 GEDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGK-----AVDMSVDHKPEDEVETNRIHAAGGQVTL------------ 389 (542)
T ss_pred CCCCCceEEEEEecCceEEEecCCCcceEEecCCc-----eeecccCCCcccHHHHHHHHhcCCeEee------------
Confidence 45689999999999999999999999999999987 9999999999999999999999998753
Q ss_pred cCCCCCCccccccccccccccCC--------ccccceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc----CCCH
Q 018316 169 PNNDSPGLAMARAFGDFCLKDFG--------LISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVAS----APSQ 236 (358)
Q Consensus 169 ~~~~~~~l~ltRalGd~~~k~~g--------v~~~Pdi~~~~l~~~d~flILaSDGlwd~ls~~ei~~iv~~----~~~~ 236 (358)
.+|.+|||.++|||||+.||.-. +.+-|||....|++.|+|+|||+||||++|+.++++++|+. ...+
T Consensus 390 DGRVNGGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~l 469 (542)
T KOG0699|consen 390 DGRVNGGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSL 469 (542)
T ss_pred cceecCccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchH
Confidence 33349999999999999999732 78899999999999999999999999999999999999875 4678
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEecCC
Q 018316 237 ATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHS 273 (358)
Q Consensus 237 ~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~~~ 273 (358)
..+++.|.+.++.-..... |.+-||+||||+.|...
T Consensus 470 s~iceeL~D~CLAp~T~GD-GTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 470 SEICEELCDACLAPSTDGD-GTGCDNMTVIITTFKRK 505 (542)
T ss_pred HHHHHHHHHhhcCCCCCCC-CcCCCcceEEEEEeccc
Confidence 8999999999997744333 35679999999999853
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.96 E-value=2.3e-28 Score=251.52 Aligned_cols=178 Identities=20% Similarity=0.238 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHHH
Q 018316 65 PLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREA 144 (358)
Q Consensus 65 ~l~~al~~a~~~~~~~l~~~~~~~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~ 144 (358)
.++++|..++..+.+........+..+||||++++++.++++|++||||||+|++++++ .++|||+||++....
T Consensus 457 ~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g----~l~QLT~DHs~~~~l-- 530 (645)
T PRK14559 457 TIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG----GLEQLTVDHEVGQRE-- 530 (645)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC----eEEEeCCCCCHHHHH--
Confidence 45555555555544433222222455799999999999999999999999999996542 399999999875322
Q ss_pred HHHHhcCCeEeeccCCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCC--CCC
Q 018316 145 ARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWD--VIS 222 (358)
Q Consensus 145 ~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd--~ls 222 (358)
...| +...... ...+...+|||||+...+ ..+|++..+.+.++| +|||||||||| .+.
T Consensus 531 ---v~~G--i~~~~a~----------~~p~~~~LTrALG~~~~~----~l~Pdi~~~~L~~gD-~lLLCSDGL~D~~~ve 590 (645)
T PRK14559 531 ---IQRG--VEPQIAY----------ARPDAYQLTQALGPRDNS----AIQPDIQFLEIEEDT-LLLLCSDGLSDNDLLE 590 (645)
T ss_pred ---HHhC--CCHHHHh----------cCcccceeeeccCCCCCC----cccceEEEEEcCCCC-EEEEECCCCCCCcccc
Confidence 2222 1100000 002345899999987543 248999999999988 99999999999 455
Q ss_pred H---HHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEecCCCC
Q 018316 223 N---KEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSA 275 (358)
Q Consensus 223 ~---~ei~~iv~~~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~~~~~ 275 (358)
. +++..++....++..++++|++.|+.+ |+.||||+|++++...+.
T Consensus 591 ~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~-------gg~DNITvIvV~l~~~p~ 639 (645)
T PRK14559 591 THWQTHLLPLLSSSANLDQGLNKLIDLANQY-------NGHDNITAILVRLKVRPQ 639 (645)
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-------CCCCcEEEEEEEeccCCC
Confidence 4 456677777788999999999999999 999999999999976443
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.96 E-value=1.1e-27 Score=221.09 Aligned_cols=181 Identities=43% Similarity=0.568 Sum_probs=155.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCC--CCccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCC
Q 018316 63 YLPLKKSMLKSFKLMDKELKLHPA--IDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDL 140 (358)
Q Consensus 63 ~~~l~~al~~a~~~~~~~l~~~~~--~~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~ 140 (358)
...+.+.|.++|+.+++.+..... .....+|||++++++.+++++++|+||||+|+++++. ++++|.||.+..
T Consensus 68 ~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~-----~~~lt~dh~~~~ 142 (254)
T cd00143 68 EEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGE-----AVQLTKDHKPVN 142 (254)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCc-----eeEcCCCCCCcC
Confidence 345667788888888888765532 2356899999999999999999999999999999886 999999999988
Q ss_pred HHHHHHHHhcCCeEeeccCCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEc-CCCCeEEEEEcCCCCC
Q 018316 141 PREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRL-TEKDEFIILATDGVWD 219 (358)
Q Consensus 141 ~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l-~~~d~flILaSDGlwd 219 (358)
+.|..|+...++.+.. .+ ..+...+||+||+..+|.. +..+|++....+ .++| +|||||||||+
T Consensus 143 ~~~~~~i~~~~~~~~~-------~~------~~~~~~~t~~lG~~~~~~~-~~~~~~~~~~~l~~~~d-~ill~SDG~~~ 207 (254)
T cd00143 143 EEERERIEKAGGRVSN-------GR------VPGVLAVTRALGDFDLKPG-VSAEPDVTVVKLTEDDD-FLILASDGLWD 207 (254)
T ss_pred hHHHHHHHHcCCcEEe-------CE------EcCceeeccccCCccccCC-EEcCCeEEEEEeCCCCc-EEEEECCCCee
Confidence 9999999999886421 01 1345599999999988754 788999999999 7888 89999999999
Q ss_pred CCCHHHHHHHHHcCC---CHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEe
Q 018316 220 VISNKEAVEIVASAP---SQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFL 270 (358)
Q Consensus 220 ~ls~~ei~~iv~~~~---~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l 270 (358)
+++++++.+++.... +++.+|+.|++.|... ++.||+|+|++.+
T Consensus 208 ~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~-------~~~Dn~t~i~~~~ 254 (254)
T cd00143 208 VLSNQEAVDIVRSELAKEDLQEAAQELVDLALRR-------GSHDNITVVVVRL 254 (254)
T ss_pred ccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhC-------CCCCCEEEEEEeC
Confidence 999999999999876 7999999999999999 8999999999875
No 11
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.96 E-value=2.2e-27 Score=219.99 Aligned_cols=177 Identities=40% Similarity=0.584 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCC--CccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHH
Q 018316 65 PLKKSMLKSFKLMDKELKLHPAI--DCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPR 142 (358)
Q Consensus 65 ~l~~al~~a~~~~~~~l~~~~~~--~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~ 142 (358)
.+.+.|.+++..+++.+...... ....+|||++++++..++++++|+||||+|+++.+. +.+||.||++....
T Consensus 73 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~-----~~~lt~dh~~~~~~ 147 (255)
T smart00332 73 DVEEALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGK-----AVQLTEDHKPSNED 147 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCc-----eeEcCCCCCCcCHH
Confidence 45566777777777777554322 245799999999999999999999999999999875 89999999999999
Q ss_pred HHHHHHhcCCeEeeccCCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEc-CCCCeEEEEEcCCCCCCC
Q 018316 143 EAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRL-TEKDEFIILATDGVWDVI 221 (358)
Q Consensus 143 E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l-~~~d~flILaSDGlwd~l 221 (358)
|..||...++.+... +. .+.+.+||++|+..+|+. ++.+|++...++ .++| +|||||||||+++
T Consensus 148 ~~~~i~~~~~~~~~~-------~~------~~~~~lt~~~g~~~~~~~-i~~~p~~~~~~~~~~~d-~ill~SDGv~~~l 212 (255)
T smart00332 148 ERARIEAAGGFVING-------RV------NGVLALSRAIGDFFLKPY-VSAEPDVTVVELTEKDD-FLILASDGLWDVL 212 (255)
T ss_pred HHHHHHHcCCEEECC-------eE------CCeEecccccCCHhhcCC-eEeeeEEEEEEecCCCc-EEEEECCccccCC
Confidence 999999999866431 11 334699999999988766 889999999996 7788 9999999999999
Q ss_pred CHHHHHHHHHcCC---CHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEE
Q 018316 222 SNKEAVEIVASAP---SQATAARALVDWAVRSWKLKYPTSKNDDCAVVCL 268 (358)
Q Consensus 222 s~~ei~~iv~~~~---~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv 268 (358)
+++++.+++.... ++..+|+.|++.|..+ ++.||+|+|++
T Consensus 213 ~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~-------~~~Dn~T~ivv 255 (255)
T smart00332 213 SNQEVVDIVRKHLSKSDPEEAAKRLIDLALAR-------GSKDNITVIVV 255 (255)
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHc-------CCCCCeEEEEC
Confidence 9999999998865 5999999999999998 99999999985
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.94 E-value=2.5e-25 Score=206.16 Aligned_cols=209 Identities=28% Similarity=0.420 Sum_probs=159.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhCCCCCccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCC
Q 018316 58 KLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLK 137 (358)
Q Consensus 58 ~~~~~~~~l~~al~~a~~~~~~~l~~~~~~~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~ 137 (358)
+......-+..+|..||+.||+.+.+....-...+|||+++++.--++|||||.|||||++.|+++ ++.|+++.+
T Consensus 212 k~Ir~E~LViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnde-----irplS~efT 286 (493)
T KOG1323|consen 212 KRIRHEHLVIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDE-----IRPLSKEFT 286 (493)
T ss_pred ccCchHHhhHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCC-----eeecccccC
Confidence 344455668899999999999999877655566789999999999999999999999999999998 999999999
Q ss_pred CCCHHHHHHHHhcC--------CeEeeccC-------CCc---ceEE-----e-------------------ccCCCCCC
Q 018316 138 PDLPREAARIQQCK--------GRVFALQD-------EPE---VARV-----W-------------------LPNNDSPG 175 (358)
Q Consensus 138 ~~~~~E~~Ri~~~g--------g~v~~~~~-------~~~---~~rv-----~-------------------~~~~~~~~ 175 (358)
|. .|++|++... +....+.. +-+ ..|= | .+.+....
T Consensus 287 Pe--tERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~T 364 (493)
T KOG1323|consen 287 PE--TERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLAT 364 (493)
T ss_pred cH--HHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhh
Confidence 84 5788877532 21111100 000 0000 0 01123566
Q ss_pred cccccccccccccc---------CCccccceEEEEEcCC----CCeEEEEEcCCCCCCCCHHHHHHHHHcC------CCH
Q 018316 176 LAMARAFGDFCLKD---------FGLISVPDIYYRRLTE----KDEFIILATDGVWDVISNKEAVEIVASA------PSQ 236 (358)
Q Consensus 176 l~ltRalGd~~~k~---------~gv~~~Pdi~~~~l~~----~d~flILaSDGlwd~ls~~ei~~iv~~~------~~~ 236 (358)
+.+||.|||..+|- + +.+.|+|+...+.. .|+.+|||||||||+++++|+..++++. .+|
T Consensus 365 igVsRGlGDH~Lkv~dsnl~iKPF-LssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp 443 (493)
T KOG1323|consen 365 IGVSRGLGDHHLKVVDSNLSIKPF-LSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADP 443 (493)
T ss_pred heeccccCcceeeeecCCcccchh-hhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCCh
Confidence 89999999998764 4 78899999998874 4449999999999999999999999874 223
Q ss_pred ---HHHHHHHHHHHHHh-----ccccCCC-CCCCcEEEEEEEecCCC
Q 018316 237 ---ATAARALVDWAVRS-----WKLKYPT-SKNDDCAVVCLFLEHSS 274 (358)
Q Consensus 237 ---~~aA~~Lv~~A~~~-----~~~~~~~-g~~DNiTvvvv~l~~~~ 274 (358)
..+|+.|+..|... |++..++ |+.|||||.|+.+....
T Consensus 444 ~RYt~aaqdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~ 490 (493)
T KOG1323|consen 444 SRYTQAAQDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCA 490 (493)
T ss_pred hHHHHHHHHHHHHhcCccCCCceeccCCCcCCCCceEEEEEeccCCC
Confidence 47899999888644 8887765 78999999999987654
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.80 E-value=3.1e-19 Score=184.58 Aligned_cols=201 Identities=25% Similarity=0.321 Sum_probs=164.3
Q ss_pred hhhHHHhhccHHHHHHHHhcCCCccccccCCCCcccccccccccccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 018316 2 VAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKEL 81 (358)
Q Consensus 2 va~~v~~~lp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~~~~l 81 (358)
|.++|++.+...|.++++....++ +. +..+|..+++++
T Consensus 565 v~~~vq~~ma~~L~eev~~~~~et--------------------------------------~~----mr~~fl~~~rkl 602 (1081)
T KOG0618|consen 565 VLSLVQDTMASYLAEEVQLYGNET--------------------------------------EQ----MRNTFLRLNRKL 602 (1081)
T ss_pred HHHHHHHHHHHHHHHHHHhccChH--------------------------------------HH----HHHHHHHHhhhh
Confidence 567889999999998888664322 11 666777778777
Q ss_pred hhCCCCCccCCcceEEEEEEEC--------CeEEEEEEccceEEEEEecCCCceEEEEcCCCC-CCCCHHHHHHHHhcCC
Q 018316 82 KLHPAIDCFCSGTTAVTLVKQG--------PDIVIGNVGDSRAVLATREKDNSLVAVQLTVDL-KPDLPREAARIQQCKG 152 (358)
Q Consensus 82 ~~~~~~~~~~~GtTavv~li~~--------~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH-~~~~~~E~~Ri~~~gg 152 (358)
..... .-|..++.+.+.. .++.+||||+|.++++++++ ..++|+-. ....++|.+||+..+|
T Consensus 603 g~~g~----~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~-----~~p~t~~~~~~v~~eE~~RI~~~~g 673 (1081)
T KOG0618|consen 603 GEEGQ----VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGK-----PLPTTRSPMLEVDREEYKRIVDSKG 673 (1081)
T ss_pred hhhhc----cccchhhheeecccccCcccchhhhHhhhccchhhhhhcCC-----cCcccccccccCCHHHHHHHHHhcC
Confidence 55432 2355555555544 46899999999999999987 55555544 4458999999999999
Q ss_pred eEeeccCCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc
Q 018316 153 RVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVAS 232 (358)
Q Consensus 153 ~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd~ls~~ei~~iv~~ 232 (358)
+|.. + .++ +|....||++|.+...+. +.+.|+|....|++.|+|||+++-+||++|+-+++++++++
T Consensus 674 ~i~e---d---~k~------ngvt~~tR~iG~~~l~P~-v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn 740 (1081)
T KOG0618|consen 674 FITE---D---NKL------NGVTSSTRAIGPFSLFPH-VLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRN 740 (1081)
T ss_pred eecC---C---Cee------eceeeeeeeccccccccc-ccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhc
Confidence 8853 1 112 555689999999988886 99999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEecCC
Q 018316 233 APSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHS 273 (358)
Q Consensus 233 ~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~~~ 273 (358)
..+|-.||++|++.|..+ |..||++|+||++...
T Consensus 741 ~~dpL~AAkKL~d~AqSY-------gc~~nv~vlVv~l~~~ 774 (1081)
T KOG0618|consen 741 VEDPLLAAKKLCDLAQSY-------GCAENVSVLVVRLNHL 774 (1081)
T ss_pred CCchHHHHHHHHHHHHhc-------ccccCeeEEEEEeecc
Confidence 999999999999999999 9999999999999863
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.70 E-value=7.1e-16 Score=143.49 Aligned_cols=139 Identities=25% Similarity=0.300 Sum_probs=101.7
Q ss_pred CCcceEEEEEEE--CCeEEEEEEccceEEEEEecCCCceEEEEcCCCC--CCCCHHHHHHHHhcCCeEeeccCCCcceEE
Q 018316 91 CSGTTAVTLVKQ--GPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDL--KPDLPREAARIQQCKGRVFALQDEPEVARV 166 (358)
Q Consensus 91 ~~GtTavv~li~--~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH--~~~~~~E~~Ri~~~gg~v~~~~~~~~~~rv 166 (358)
-++|||+++++. +++||+||+|||-..++|.++ +++-|..+ ..+.|-+ +...|.
T Consensus 166 vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~-----vv~~S~~Q~H~FN~PyQ-------------Ls~~p~---- 223 (330)
T KOG1379|consen 166 VGSSTACILALDRENGKLHTANLGDSGFLVVREGK-----VVFRSPEQQHYFNTPYQ-------------LSSPPE---- 223 (330)
T ss_pred CCcceeeeeeeecCCCeEEEeeccCcceEEEECCE-----EEEcCchheeccCCcee-------------eccCCc----
Confidence 367888888888 899999999999999999885 66555432 2221111 111100
Q ss_pred eccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcC-----CCHHHHHH
Q 018316 167 WLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASA-----PSQATAAR 241 (358)
Q Consensus 167 ~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd~ls~~ei~~iv~~~-----~~~~~aA~ 241 (358)
...-+++| .....+++.+++.+|| +||||||||||+|.+++|++++... .+++..|+
T Consensus 224 ----------~~~~~~~d-------~p~~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~ 285 (330)
T KOG1379|consen 224 ----------GYSSYISD-------VPDSADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQ 285 (330)
T ss_pred ----------cccccccC-------CccccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhccccccHHHHHH
Confidence 11223344 2345678899999999 9999999999999999999998763 57899999
Q ss_pred HHHHHHHHhcc----------------ccCCCCCCCcEEEEEEE
Q 018316 242 ALVDWAVRSWK----------------LKYPTSKNDDCAVVCLF 269 (358)
Q Consensus 242 ~Lv~~A~~~~~----------------~~~~~g~~DNiTvvvv~ 269 (358)
+|++.|.+.-+ ..+.||+.||||||+..
T Consensus 286 ~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~ 329 (330)
T KOG1379|consen 286 KIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSS 329 (330)
T ss_pred HHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEec
Confidence 99999987621 22446799999999875
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.38 E-value=1.3e-11 Score=109.98 Aligned_cols=123 Identities=15% Similarity=0.140 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHhhCCCCCccCCcceEEEEEE--ECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHHHHHH
Q 018316 70 MLKSFKLMDKELKLHPAIDCFCSGTTAVTLVK--QGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARI 147 (358)
Q Consensus 70 l~~a~~~~~~~l~~~~~~~~~~~GtTavv~li--~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri 147 (358)
+...+..+++.+... ....+|+|++++++ ..++++++|+||+|+|+++.++. ..+++.+
T Consensus 66 ~~~~l~~~n~~l~~~---~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~----~~~~~~~------------ 126 (193)
T smart00331 66 LSQILERLNRAIYEN---GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGG----LVEDLDD------------ 126 (193)
T ss_pred HHHHHHHHHHHHHhc---CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCC----eEEEcCC------------
Confidence 455666777777654 23368999999988 67899999999999999994321 3444433
Q ss_pred HhcCCeEeeccCCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHH
Q 018316 148 QQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAV 227 (358)
Q Consensus 148 ~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd~ls~~ei~ 227 (358)
.++.+|.. ...++++..+++.++| .|+|+|||||+.++.+++.
T Consensus 127 ------------------------------~~~~lG~~------~~~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~l~ 169 (193)
T smart00331 127 ------------------------------LGAPLGLE------PDVEVDVRELTLEPGD-LLLLYTDGLTEARNPERLE 169 (193)
T ss_pred ------------------------------CCceeeeC------CCCcceeEEEeeCCCC-EEEEECCCccccCChHHHH
Confidence 12345544 2345778888999999 8999999999999999999
Q ss_pred HHHHcC--CCHHHHHHHHHHHHH
Q 018316 228 EIVASA--PSQATAARALVDWAV 248 (358)
Q Consensus 228 ~iv~~~--~~~~~aA~~Lv~~A~ 248 (358)
+++.+. .+++++++.+.+.++
T Consensus 170 ~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 170 ELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHh
Confidence 999886 468888888887764
No 16
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.29 E-value=2.9e-11 Score=109.32 Aligned_cols=101 Identities=29% Similarity=0.288 Sum_probs=59.8
Q ss_pred CccCCcceEEEEEEECCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHHHHHHHhcCCeEeeccCCCcceEEe
Q 018316 88 DCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVW 167 (358)
Q Consensus 88 ~~~~~GtTavv~li~~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~ 167 (358)
....++||++++++.++.++++|+||||+|+..+++ .+.+++.||.. |..+
T Consensus 93 ~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g----~~~~l~~~~~~----~~~~--------------------- 143 (212)
T PF13672_consen 93 ELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG----EIQQLTDDHSG----EYPN--------------------- 143 (212)
T ss_dssp GGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT----EEEE-S---BH----HHHH---------------------
T ss_pred cccccCceEEEEEEECCEEEEEEECCCeEEEEECCC----EEEEcCCCccc----hhhh---------------------
Confidence 455789999999999999999999999998776554 37889998862 2211
Q ss_pred ccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCCCCCHHH-HHHHHHcC
Q 018316 168 LPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKE-AVEIVASA 233 (358)
Q Consensus 168 ~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd~ls~~e-i~~iv~~~ 233 (358)
. ++.+.... .....++..+++.++| .|+|||||||+.+...+ +..++...
T Consensus 144 ---------~-~~~~~~~~-----~~~~~~~~~~~~~~~d-~ilL~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 144 ---------Q-TRSLTGDD-----PEPDVQYGSIPLEEGD-VILLCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp ---------C-TTSCCHHC-----CCTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH----
T ss_pred ---------h-hhccCccc-----cccCCeEEEEEcCCCC-EEEEECcCccccCCCHHHHHHHhhhc
Confidence 1 22222211 2223467778888999 88999999999998665 66666553
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.12 E-value=1.2e-09 Score=116.38 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=100.6
Q ss_pred HHHHHHHHHHhhCCCCCccCCcceEEEEEEE--CCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHHHHHHHh
Q 018316 72 KSFKLMDKELKLHPAIDCFCSGTTAVTLVKQ--GPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQ 149 (358)
Q Consensus 72 ~a~~~~~~~l~~~~~~~~~~~GtTavv~li~--~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~ 149 (358)
.+++.+|..+.... ...+++|+.+++++ .+++.++|+|+++.|+.+++. +.+++..+-|
T Consensus 618 ~ai~~lN~~L~~~~---~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~-----v~~i~s~~lP----------- 678 (764)
T TIGR02865 618 VAIKTVNSILSLRS---TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAK-----VEVIRSSNLP----------- 678 (764)
T ss_pred HHHHHHHHHHHhCC---CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCE-----EEEecCCCce-----------
Confidence 55677777765432 22578999988885 689999999999999988653 6666533211
Q ss_pred cCCeEeeccCCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCCCCCHHH----
Q 018316 150 CKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKE---- 225 (358)
Q Consensus 150 ~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd~ls~~e---- 225 (358)
+|-. -..+++....++.+|| +|||+||||||..++.+
T Consensus 679 --------------------------------lGil------~~~~~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~~~~ 719 (764)
T TIGR02865 679 --------------------------------IGIL------DEVDVELVRKKLKNGD-LIVMVSDGVLEGEKEVEGKVL 719 (764)
T ss_pred --------------------------------eEec------cCCccceEEEEeCCCC-EEEEECCCCCcCCcccccHHH
Confidence 2211 1235677788999999 89999999999876533
Q ss_pred -HHHHHHc--CCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEe
Q 018316 226 -AVEIVAS--APSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFL 270 (358)
Q Consensus 226 -i~~iv~~--~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l 270 (358)
+.+++.+ ..+|++.++.|++.|.+.. .+...||+|++++++
T Consensus 720 ~l~~~l~~~~~~~p~ela~~Il~~a~~~~----~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 720 WLVRKLKETNTNDPEEIAEYLLEKAKELR----SGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHhc----CCCCCCCeEEEEEEe
Confidence 7777765 3579999999999998761 123589999999876
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.07 E-value=9e-09 Score=91.33 Aligned_cols=142 Identities=18% Similarity=0.144 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHhhCCCCCccCCcceEEEEEEE--CCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHHHHHHH
Q 018316 71 LKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQ--GPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQ 148 (358)
Q Consensus 71 ~~a~~~~~~~l~~~~~~~~~~~GtTavv~li~--~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~ 148 (358)
...+..+++.+....... .+++|++++++. .+.++++|+|++++++++.++. ....+.....
T Consensus 41 ~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~~~~~---~~~~~~~~~~----------- 104 (193)
T PF07228_consen 41 EELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTLTYANAGHPPPLLLRPGGR---EIEQLESEGP----------- 104 (193)
T ss_dssp HHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEEEEEEESSSEEEEEETTCT---EEEEETCSSB-----------
T ss_pred HHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEEEEeCCCCCCEEEEecccc---ceeecccCcc-----------
Confidence 344555555553222111 468888888865 5789999999999999998541 1333321111
Q ss_pred hcCCeEeeccCCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCCCCCHH----
Q 018316 149 QCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNK---- 224 (358)
Q Consensus 149 ~~gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd~ls~~---- 224 (358)
.+|-. ....+....+++.++| .|+|+||||+|....+
T Consensus 105 --------------------------------~lG~~------~~~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~ 145 (193)
T PF07228_consen 105 --------------------------------PLGIF------EDIDYQEQEIQLEPGD-RLLLYTDGLFEALNEDGEFF 145 (193)
T ss_dssp --------------------------------BCSSS------CTTCEEEEEEE--TTE-EEEEECHHHCTTTCHHCHHC
T ss_pred --------------------------------ceeee------ccccccceEEEecccc-EEEEeCCChhhccCCccchh
Confidence 13332 1234566788999999 8999999999998433
Q ss_pred ---HHHHHHHc--CCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEec
Q 018316 225 ---EAVEIVAS--APSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLE 271 (358)
Q Consensus 225 ---ei~~iv~~--~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~ 271 (358)
.+.+++.+ ..++++.++.|++.+... ..+...||+||+++++.
T Consensus 146 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~----~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 146 GEERLLELLDENRGLSPQEIIDALLEAIDRF----GKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp CCHHHHHHHHCHTTS-HHHHHHHHHHHHHHH----TTSSTSS-EEEEEEEE-
T ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHHHHHh----cCCCCCCceEEEEEEEC
Confidence 44677773 467899999999999873 12368999999999863
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=97.80 E-value=0.0013 Score=64.85 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=96.7
Q ss_pred HHHHHHHHHhhCCCCCccCCcceEEEEEEE--CCeEEEEEEccceEEEEEecCCCceEEEEcCCCCCCCCHHHHHHHHhc
Q 018316 73 SFKLMDKELKLHPAIDCFCSGTTAVTLVKQ--GPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQC 150 (358)
Q Consensus 73 a~~~~~~~l~~~~~~~~~~~GtTavv~li~--~~~l~vanvGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~ 150 (358)
.++.+|+.+...... .+=+|+...+++ .+.+..+|+|=--+++.+.+++. ....++
T Consensus 215 ~l~~~n~~~~~~~~~---~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~--~~~~l~----------------- 272 (367)
T COG2208 215 VLETLNRVLKQNLEE---DMFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEI--EVEDLT----------------- 272 (367)
T ss_pred HHHHHHHHHHhcccC---CcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCc--eeEEcc-----------------
Confidence 455556666554322 267787777765 57899999999988888876521 011121
Q ss_pred CCeEeeccCCCcceEEeccCCCCCCccccccccccccccCCccccceEEEEEcCCCCeEEEEEcCCCCC-------CCCH
Q 018316 151 KGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWD-------VISN 223 (358)
Q Consensus 151 gg~v~~~~~~~~~~rv~~~~~~~~~l~ltRalGd~~~k~~gv~~~Pdi~~~~l~~~d~flILaSDGlwd-------~ls~ 223 (358)
....++|.. -...+.+....+.+|| .++|.|||+.+ .+..
T Consensus 273 --------------------------~~g~piG~~------~~~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~ 319 (367)
T COG2208 273 --------------------------ALGLPIGLL------PDYQYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGL 319 (367)
T ss_pred --------------------------CCCceeeec------CCccchheeEEecCCC-EEEEEcCCeeeeecCCccEecH
Confidence 334456654 3345667788999999 99999999999 5566
Q ss_pred HHHHHHHHc--CCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEec
Q 018316 224 KEAVEIVAS--APSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLE 271 (358)
Q Consensus 224 ~ei~~iv~~--~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvvvv~l~ 271 (358)
+...+++.. ..+++++++.+.+.....- ......||+|++++++.
T Consensus 320 ~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~---~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 320 ERLLKILGRLLGQPAEEILEAILESLEELQ---GDQIQDDDITLLVLKVK 366 (367)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhh---CCccccCceEEEEEEec
Confidence 777777773 3578888888887777661 11245788999999874
No 20
>PF05785 CNF1: Rho-activating domain of cytotoxic necrotizing factor; InterPro: IPR008430 This entry represents several bacterial cytotoxic necrotizing factor proteins as well as related dermonecrotic toxin (DNT) from Bordetella species. Cytotoxic necrotizing factor 1 (CNF1) is a toxin whose structure from Escherichia coli revealed a 4-layer alpha/beta/beta/alpha structure containing mixed beta-sheets []. CNF1 is expressed in strains of E. coli causing uropathogenic and neonatal meningitis. CNF1 alters host cell actin cytoskeleton and promotes bacterial invasion of the blood-brain barrier endothelial cells []. CNF1 belongs to a unique group of large cytotoxins that cause constitutive activation of Rho guanosine triphosphatases (GTPases), which are key regulators of the actin cytoskeleton []. Bordetella dermonecrotic toxin (DNT) stimulates the assembly of actin stress fibres and focal adhesions by deamidating or polyaminating Gln63 of the small GTPase Rho. DNT is an A-B toxin composed of an N-terminal receptor-binding (B) domain and a C-terminal enzymatically active (A) domain [].; PDB: 1HZG_A 1HQ0_A.
Probab=36.19 E-value=42 Score=31.76 Aligned_cols=24 Identities=21% Similarity=0.176 Sum_probs=18.6
Q ss_pred cCCcceEEEEEEECCeEEEEEEccc
Q 018316 90 FCSGTTAVTLVKQGPDIVIGNVGDS 114 (358)
Q Consensus 90 ~~~GtTavv~li~~~~l~vanvGDS 114 (358)
.-+|||.+++ ++++.+|..|+|-+
T Consensus 130 ~LSGCT~i~A-~K~~~~y~~HtGk~ 153 (281)
T PF05785_consen 130 ALSGCTMIYA-RKDNYFYAYHTGKS 153 (281)
T ss_dssp -BSS-EEEEE-EETTEEEEEEEEES
T ss_pred ccCCCEEEEE-EcCCeEEEEEcCCC
Confidence 3589999887 57789999999975
No 21
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=32.93 E-value=75 Score=28.27 Aligned_cols=42 Identities=26% Similarity=0.414 Sum_probs=34.2
Q ss_pred EEEEEcCCCC-----------CCCCHHHHHHHHHcCC----CHHHHHHHHHHHHHHh
Q 018316 209 FIILATDGVW-----------DVISNKEAVEIVASAP----SQATAARALVDWAVRS 250 (358)
Q Consensus 209 flILaSDGlw-----------d~ls~~ei~~iv~~~~----~~~~aA~~Lv~~A~~~ 250 (358)
-++..|.|+| |+|.++...+.+.... =|.+.|..|+++-.++
T Consensus 73 TvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~R 129 (237)
T COG3700 73 TVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRR 129 (237)
T ss_pred eeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhc
Confidence 6777887777 5788888888888763 4789999999999888
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=26.15 E-value=40 Score=25.18 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=15.5
Q ss_pred EcC-CCCeEEEEEcCCCCCCCCHH
Q 018316 202 RLT-EKDEFIILATDGVWDVISNK 224 (358)
Q Consensus 202 ~l~-~~d~flILaSDGlwd~ls~~ 224 (358)
++. .|. .+|+|+||+|=.+...
T Consensus 22 ~l~~~G~-Rllva~nGv~lEv~r~ 44 (72)
T PF09436_consen 22 PLERPGH-RLLVASNGVFLEVRRP 44 (72)
T ss_pred ccccCCc-EEEEecCcEEEEEech
Confidence 344 455 7899999999655443
Done!