Query 018317
Match_columns 358
No_of_seqs 350 out of 2451
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 13:21:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bq0_A DNAJ, HSP40; chaperone, 99.9 2E-22 6.9E-27 164.6 5.6 97 110-214 2-99 (103)
2 2ys8_A RAB-related GTP-binding 99.8 7.6E-21 2.6E-25 151.7 9.6 82 90-171 6-87 (90)
3 1hdj_A Human HSP40, HDJ-1; mol 99.8 9.3E-21 3.2E-25 146.6 7.9 72 110-181 2-73 (77)
4 2ctp_A DNAJ homolog subfamily 99.8 1.6E-20 5.5E-25 145.6 6.6 71 109-179 5-75 (78)
5 2cug_A Mkiaa0962 protein; DNAJ 99.8 3.1E-20 1.1E-24 147.4 7.4 71 109-179 15-85 (88)
6 2dn9_A DNAJ homolog subfamily 99.8 4.3E-20 1.5E-24 143.4 7.8 71 109-179 5-76 (79)
7 2ctr_A DNAJ homolog subfamily 99.8 1.9E-20 6.5E-25 148.7 4.8 71 110-180 6-76 (88)
8 2och_A Hypothetical protein DN 99.8 7.4E-20 2.5E-24 140.1 7.5 70 107-178 4-73 (73)
9 2ej7_A HCG3 gene; HCG3 protein 99.8 7.8E-20 2.7E-24 142.9 7.2 71 110-180 8-80 (82)
10 2o37_A Protein SIS1; HSP40, J- 99.8 3.7E-20 1.3E-24 148.2 4.3 72 107-180 4-75 (92)
11 2dmx_A DNAJ homolog subfamily 99.8 1.9E-19 6.5E-24 143.9 6.8 72 110-181 8-81 (92)
12 2lgw_A DNAJ homolog subfamily 99.8 1.2E-19 4E-24 147.4 5.3 71 111-181 2-74 (99)
13 2yua_A Williams-beuren syndrom 99.8 9.2E-19 3.2E-23 141.9 8.6 69 109-177 15-84 (99)
14 2ctq_A DNAJ homolog subfamily 99.8 2.2E-19 7.7E-24 148.7 5.0 70 110-179 19-89 (112)
15 3lz8_A Putative chaperone DNAJ 99.8 3.8E-20 1.3E-24 180.0 0.0 102 110-215 27-128 (329)
16 1wjz_A 1700030A21RIK protein; 99.8 4.1E-19 1.4E-23 142.2 5.5 69 109-177 14-89 (94)
17 2ctw_A DNAJ homolog subfamily 99.7 1.1E-18 3.7E-23 144.0 6.3 71 109-179 15-86 (109)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 1.5E-18 5.1E-23 142.9 3.2 70 109-178 13-87 (109)
19 3apq_A DNAJ homolog subfamily 99.7 1.1E-17 3.7E-22 151.1 8.7 71 111-181 2-73 (210)
20 2l6l_A DNAJ homolog subfamily 99.7 3E-17 1E-21 143.2 6.2 68 110-177 9-83 (155)
21 1gh6_A Large T antigen; tumor 99.7 1.1E-17 3.9E-22 139.0 1.8 65 110-177 7-73 (114)
22 1faf_A Large T antigen; J doma 99.6 1.4E-16 4.8E-21 124.0 4.8 64 111-178 11-76 (79)
23 2pf4_E Small T antigen; PP2A, 99.6 5.1E-17 1.8E-21 144.2 1.4 65 110-177 10-76 (174)
24 3hho_A CO-chaperone protein HS 99.6 3.3E-16 1.1E-20 139.4 5.8 67 110-176 3-77 (174)
25 1fpo_A HSC20, chaperone protei 99.6 1E-15 3.5E-20 135.8 8.0 67 111-177 1-75 (171)
26 1iur_A KIAA0730 protein; DNAJ 99.6 2.6E-16 9E-21 125.0 2.4 60 111-170 16-77 (88)
27 1n4c_A Auxilin; four helix bun 99.6 4.6E-16 1.6E-20 139.0 3.5 62 111-172 117-182 (182)
28 3bvo_A CO-chaperone protein HS 99.6 1.6E-15 5.5E-20 138.5 5.6 67 109-175 41-115 (207)
29 2qwo_B Putative tyrosine-prote 99.6 7.8E-16 2.7E-20 123.1 2.2 59 107-165 28-91 (92)
30 3ag7_A Putative uncharacterize 99.5 8.5E-16 2.9E-20 126.1 1.5 57 110-167 40-104 (106)
31 2guz_A Mitochondrial import in 99.5 4.3E-15 1.5E-19 113.2 3.7 56 111-169 14-70 (71)
32 3uo3_A J-type CO-chaperone JAC 99.5 3.8E-15 1.3E-19 133.3 3.1 65 109-175 9-80 (181)
33 3apo_A DNAJ homolog subfamily 99.5 6.7E-15 2.3E-19 156.8 2.0 73 109-181 19-92 (780)
34 2y4t_A DNAJ homolog subfamily 99.4 1.8E-13 6.3E-18 132.3 9.5 66 109-174 380-449 (450)
35 2guz_B Mitochondrial import in 98.6 3.2E-08 1.1E-12 73.9 4.8 50 113-165 6-58 (65)
36 2pzi_A Probable serine/threoni 96.9 0.0011 3.7E-08 69.4 7.0 131 9-162 535-675 (681)
37 4gcn_A Protein STI-1; structur 93.6 0.098 3.3E-06 41.8 5.5 37 5-41 5-41 (127)
38 4gco_A Protein STI-1; structur 93.3 0.13 4.5E-06 41.1 5.8 39 3-41 8-46 (126)
39 3upv_A Heat shock protein STI1 92.4 0.2 6.9E-06 38.9 5.5 36 6-41 2-37 (126)
40 4ga2_A E3 SUMO-protein ligase 92.2 0.13 4.4E-06 42.3 4.3 39 3-41 26-64 (150)
41 4gcn_A Protein STI-1; structur 91.4 0.25 8.6E-06 39.3 5.1 39 13-51 88-126 (127)
42 2l6j_A TPR repeat-containing p 91.0 0.33 1.1E-05 36.2 5.1 35 7-41 3-37 (111)
43 3sz7_A HSC70 cochaperone (SGT) 90.6 0.38 1.3E-05 39.3 5.6 39 3-41 6-44 (164)
44 3vtx_A MAMA; tetratricopeptide 90.3 0.39 1.3E-05 39.7 5.4 35 7-41 4-38 (184)
45 2v5f_A Prolyl 4-hydroxylase su 90.1 0.52 1.8E-05 36.4 5.7 32 8-39 5-36 (104)
46 1na3_A Designed protein CTPR2; 90.0 0.55 1.9E-05 33.6 5.5 36 6-41 7-42 (91)
47 2hr2_A Hypothetical protein; a 89.8 0.25 8.7E-06 42.5 4.0 36 5-40 8-43 (159)
48 3ma5_A Tetratricopeptide repea 89.6 0.3 1E-05 37.0 3.9 37 6-42 5-41 (100)
49 1elw_A TPR1-domain of HOP; HOP 89.3 0.46 1.6E-05 35.2 4.7 36 6-41 2-37 (118)
50 4gco_A Protein STI-1; structur 89.1 0.51 1.7E-05 37.6 5.1 27 14-40 87-113 (126)
51 2xcb_A PCRH, regulatory protei 88.3 0.9 3.1E-05 36.3 6.1 39 3-41 13-51 (142)
52 2l6j_A TPR repeat-containing p 88.0 0.5 1.7E-05 35.1 4.1 31 11-41 41-71 (111)
53 1elr_A TPR2A-domain of HOP; HO 87.6 0.91 3.1E-05 34.1 5.5 36 6-41 2-37 (131)
54 3gyz_A Chaperone protein IPGC; 87.5 0.58 2E-05 39.0 4.6 30 11-40 73-102 (151)
55 3gyz_A Chaperone protein IPGC; 87.3 1.1 3.6E-05 37.4 6.1 39 3-41 31-69 (151)
56 1na3_A Designed protein CTPR2; 87.2 0.68 2.3E-05 33.0 4.3 31 11-41 46-76 (91)
57 1elr_A TPR2A-domain of HOP; HO 86.8 0.92 3.1E-05 34.1 5.1 43 8-50 79-121 (131)
58 3rkv_A Putative peptidylprolyl 86.4 0.97 3.3E-05 36.7 5.4 41 8-49 63-103 (162)
59 2kc7_A BFR218_protein; tetratr 86.1 0.69 2.4E-05 34.0 3.9 33 10-42 37-69 (99)
60 3ax2_A Mitochondrial import re 86.0 1.1 3.8E-05 33.6 4.9 41 10-52 19-59 (73)
61 2kat_A Uncharacterized protein 85.8 0.75 2.6E-05 35.0 4.1 36 6-41 17-52 (115)
62 3q49_B STIP1 homology and U bo 85.7 0.65 2.2E-05 36.0 3.7 37 5-41 6-42 (137)
63 2dba_A Smooth muscle cell asso 85.5 0.73 2.5E-05 35.8 4.0 37 5-41 25-61 (148)
64 3k9i_A BH0479 protein; putativ 85.3 1.2 3.9E-05 34.3 5.0 37 5-41 24-60 (117)
65 3upv_A Heat shock protein STI1 85.1 0.9 3.1E-05 35.0 4.3 32 10-41 40-71 (126)
66 2vyi_A SGTA protein; chaperone 84.7 1.4 4.8E-05 32.9 5.2 38 4-41 8-45 (131)
67 1pc2_A Mitochondria fission pr 84.6 1.7 5.7E-05 37.1 6.0 45 8-52 71-116 (152)
68 2vgx_A Chaperone SYCD; alterna 84.6 1.8 6.2E-05 35.2 6.1 39 3-41 16-54 (148)
69 1a17_A Serine/threonine protei 84.4 1.5 5E-05 34.8 5.4 37 5-41 10-46 (166)
70 2kc7_A BFR218_protein; tetratr 84.1 1 3.5E-05 33.0 4.1 31 11-41 3-33 (99)
71 1hxi_A PEX5, peroxisome target 84.1 1 3.5E-05 35.4 4.2 30 11-40 20-49 (121)
72 4ga2_A E3 SUMO-protein ligase 82.8 1.9 6.4E-05 35.0 5.5 31 11-41 68-98 (150)
73 2fbn_A 70 kDa peptidylprolyl i 82.7 1.8 6.1E-05 36.4 5.5 37 6-42 36-72 (198)
74 3sz7_A HSC70 cochaperone (SGT) 82.3 1.3 4.3E-05 36.1 4.2 32 10-41 47-78 (164)
75 1hxi_A PEX5, peroxisome target 82.3 1.5 5.1E-05 34.4 4.6 39 3-41 31-84 (121)
76 2dba_A Smooth muscle cell asso 81.9 2.2 7.6E-05 32.9 5.4 33 8-40 65-97 (148)
77 2kck_A TPR repeat; tetratricop 81.8 2.2 7.7E-05 30.9 5.2 30 11-40 43-72 (112)
78 1om2_A Protein (mitochondrial 81.6 1.8 6E-05 34.2 4.6 41 10-52 22-62 (95)
79 2xcb_A PCRH, regulatory protei 81.0 1.6 5.4E-05 34.8 4.3 32 11-42 55-86 (142)
80 2lni_A Stress-induced-phosphop 81.0 1.7 5.9E-05 32.8 4.4 35 7-41 15-49 (133)
81 2xev_A YBGF; tetratricopeptide 81.0 2.8 9.4E-05 31.9 5.6 29 12-40 80-108 (129)
82 2v5f_A Prolyl 4-hydroxylase su 80.7 2.4 8.1E-05 32.5 5.1 32 11-42 49-80 (104)
83 2e2e_A Formate-dependent nitri 80.6 2.5 8.7E-05 34.4 5.6 41 11-51 118-159 (177)
84 2lni_A Stress-induced-phosphop 80.4 2.1 7.2E-05 32.3 4.7 30 11-40 53-82 (133)
85 1hh8_A P67PHOX, NCF-2, neutrop 80.1 3.2 0.00011 34.6 6.1 33 10-42 123-155 (213)
86 2xev_A YBGF; tetratricopeptide 80.1 2.5 8.7E-05 32.1 5.1 31 11-41 42-72 (129)
87 3k9i_A BH0479 protein; putativ 80.0 2.3 8E-05 32.5 4.9 30 13-42 66-95 (117)
88 3urz_A Uncharacterized protein 80.0 4 0.00014 34.8 6.9 28 14-41 60-87 (208)
89 1elw_A TPR1-domain of HOP; HOP 79.9 2.4 8.3E-05 31.0 4.8 31 10-40 40-70 (118)
90 3uq3_A Heat shock protein STI1 79.8 3.4 0.00012 34.9 6.4 34 5-38 2-35 (258)
91 1na0_A Designed protein CTPR3; 79.8 3 0.0001 30.7 5.3 34 8-41 9-42 (125)
92 3rkv_A Putative peptidylprolyl 79.7 1.6 5.6E-05 35.3 4.0 32 6-37 9-40 (162)
93 2gw1_A Mitochondrial precursor 79.6 2.2 7.6E-05 40.5 5.5 35 6-40 4-38 (514)
94 3q49_B STIP1 homology and U bo 79.5 1.9 6.6E-05 33.2 4.3 30 11-40 46-75 (137)
95 2kck_A TPR repeat; tetratricop 79.0 1.1 3.8E-05 32.7 2.5 33 9-41 7-39 (112)
96 2vgx_A Chaperone SYCD; alterna 78.5 2 6.9E-05 34.9 4.2 31 11-41 58-88 (148)
97 1nzn_A CGI-135 protein, fissio 77.5 3.7 0.00013 33.9 5.5 42 10-51 76-118 (126)
98 2vyi_A SGTA protein; chaperone 76.8 2.7 9.3E-05 31.3 4.3 32 10-41 48-79 (131)
99 2r5s_A Uncharacterized protein 76.7 0.53 1.8E-05 39.1 0.1 39 3-41 1-39 (176)
100 3bee_A Putative YFRE protein; 76.3 2.6 8.8E-05 32.2 4.0 35 6-40 4-41 (93)
101 3ma5_A Tetratricopeptide repea 76.3 1.4 4.8E-05 33.1 2.5 31 11-41 44-74 (100)
102 1zu2_A Mitochondrial import re 76.2 2.2 7.4E-05 36.6 3.9 21 22-42 105-125 (158)
103 3vtx_A MAMA; tetratricopeptide 76.0 2.6 8.9E-05 34.4 4.3 30 11-40 110-139 (184)
104 1na0_A Designed protein CTPR3; 75.9 3 0.0001 30.7 4.3 32 10-41 45-76 (125)
105 3urz_A Uncharacterized protein 75.8 3.3 0.00011 35.3 5.1 31 11-41 91-121 (208)
106 2vq2_A PILW, putative fimbrial 75.4 4.1 0.00014 33.6 5.4 39 3-41 3-41 (225)
107 2fbn_A 70 kDa peptidylprolyl i 75.3 2.9 0.0001 34.9 4.5 30 12-41 126-155 (198)
108 3o48_A Mitochondria fission 1 74.9 4.2 0.00014 34.0 5.2 42 10-51 80-122 (134)
109 1a17_A Serine/threonine protei 73.8 3.3 0.00011 32.6 4.2 31 11-41 50-80 (166)
110 2kat_A Uncharacterized protein 72.9 1.5 5.3E-05 33.2 1.9 31 11-41 56-86 (115)
111 3ieg_A DNAJ homolog subfamily 72.9 4.4 0.00015 36.0 5.3 34 7-40 2-35 (359)
112 1y8m_A FIS1; mitochondria, unk 72.5 5.7 0.00019 33.6 5.5 43 10-52 79-122 (144)
113 3bee_A Putative YFRE protein; 72.5 5.3 0.00018 30.4 5.0 40 11-50 46-86 (93)
114 1p5q_A FKBP52, FK506-binding p 72.3 6.1 0.00021 36.7 6.4 40 8-48 196-235 (336)
115 1ihg_A Cyclophilin 40; ppiase 71.2 6.2 0.00021 37.5 6.2 39 8-47 273-311 (370)
116 2fo7_A Synthetic consensus TPR 70.9 4.2 0.00014 30.1 4.0 32 10-41 3-34 (136)
117 2e2e_A Formate-dependent nitri 70.8 2.8 9.6E-05 34.2 3.2 34 8-41 44-77 (177)
118 3qky_A Outer membrane assembly 70.4 3.5 0.00012 36.0 4.0 36 6-41 13-48 (261)
119 2r5s_A Uncharacterized protein 70.0 5.3 0.00018 32.8 4.8 33 9-41 109-141 (176)
120 3iqc_A FLIS, flagellar protein 69.9 6.1 0.00021 32.6 5.1 33 6-38 34-66 (131)
121 4i17_A Hypothetical protein; T 69.7 6.8 0.00023 33.1 5.6 36 8-43 7-42 (228)
122 2cpt_A SKD1 protein, vacuolar 69.3 6.1 0.00021 32.1 4.8 37 1-37 8-47 (117)
123 3qou_A Protein YBBN; thioredox 69.3 6.7 0.00023 35.3 5.8 34 8-41 117-150 (287)
124 1ihg_A Cyclophilin 40; ppiase 69.2 5.2 0.00018 38.1 5.2 43 8-50 307-350 (370)
125 3qky_A Outer membrane assembly 69.1 5.8 0.0002 34.5 5.1 33 10-42 150-182 (261)
126 1hh8_A P67PHOX, NCF-2, neutrop 68.6 6.5 0.00022 32.6 5.1 32 10-41 39-70 (213)
127 3uq3_A Heat shock protein STI1 68.3 8 0.00027 32.5 5.8 38 4-41 135-172 (258)
128 1kt0_A FKBP51, 51 kDa FK506-bi 68.3 7.7 0.00026 37.8 6.3 42 8-50 317-358 (457)
129 2yhc_A BAMD, UPF0169 lipoprote 68.2 5.7 0.00019 34.1 4.8 31 10-40 6-36 (225)
130 3as5_A MAMA; tetratricopeptide 68.2 3 0.0001 33.1 2.8 41 1-41 1-41 (186)
131 2c2l_A CHIP, carboxy terminus 67.4 6.3 0.00022 35.5 5.1 34 8-41 4-37 (281)
132 4a1s_A PINS, partner of inscut 67.3 7.5 0.00026 35.8 5.7 38 4-41 44-81 (411)
133 4i17_A Hypothetical protein; T 67.2 5.9 0.0002 33.6 4.6 29 12-40 80-108 (228)
134 1vh6_A Flagellar protein FLIS; 66.9 7.5 0.00026 32.7 5.1 40 6-50 31-70 (145)
135 3ieg_A DNAJ homolog subfamily 66.3 6.2 0.00021 35.0 4.8 27 14-40 312-338 (359)
136 1p5q_A FKBP52, FK506-binding p 66.2 5.7 0.00019 36.9 4.7 37 6-42 145-181 (336)
137 2hr2_A Hypothetical protein; a 66.1 8.2 0.00028 32.9 5.3 39 7-46 56-101 (159)
138 2fo7_A Synthetic consensus TPR 65.9 6 0.00021 29.2 4.0 31 11-41 38-68 (136)
139 1xnf_A Lipoprotein NLPI; TPR, 65.9 8.4 0.00029 33.0 5.4 35 8-42 215-249 (275)
140 2if4_A ATFKBP42; FKBP-like, al 65.3 6.5 0.00022 36.6 4.9 36 11-47 233-268 (338)
141 1xnf_A Lipoprotein NLPI; TPR, 64.8 8.7 0.0003 32.8 5.3 36 6-41 41-76 (275)
142 2pl2_A Hypothetical conserved 64.8 8.2 0.00028 33.0 5.1 30 12-41 43-72 (217)
143 3fp2_A TPR repeat-containing p 64.4 5.6 0.00019 38.1 4.3 34 7-40 24-57 (537)
144 2pl2_A Hypothetical conserved 64.0 5.2 0.00018 34.2 3.7 29 13-41 156-184 (217)
145 2yhc_A BAMD, UPF0169 lipoprote 63.6 8.9 0.0003 32.8 5.1 32 11-42 44-75 (225)
146 2y4t_A DNAJ homolog subfamily 63.6 8.2 0.00028 36.0 5.3 37 4-40 22-58 (450)
147 4a5x_A MITD1, MIT domain-conta 61.5 9.1 0.00031 29.2 4.2 37 1-37 9-45 (86)
148 3u4t_A TPR repeat-containing p 61.3 8.3 0.00028 33.1 4.5 33 10-42 5-37 (272)
149 3as5_A MAMA; tetratricopeptide 61.1 8.5 0.00029 30.3 4.3 34 8-41 42-75 (186)
150 1kt0_A FKBP51, 51 kDa FK506-bi 60.7 11 0.00036 36.8 5.7 37 6-42 266-302 (457)
151 2rkl_A Vacuolar protein sortin 60.7 16 0.00055 25.6 4.9 32 6-37 18-49 (53)
152 3mkr_A Coatomer subunit epsilo 59.8 16 0.00054 33.0 6.4 35 13-48 205-239 (291)
153 2ho1_A Type 4 fimbrial biogene 59.1 8.4 0.00029 32.7 4.1 34 8-41 37-70 (252)
154 3ro3_A PINS homolog, G-protein 58.5 9.6 0.00033 29.1 4.0 36 6-41 7-42 (164)
155 2v6y_A AAA family ATPase, P60 58.1 16 0.00055 27.5 5.1 33 5-37 8-40 (83)
156 4abn_A Tetratricopeptide repea 57.5 7.4 0.00025 38.0 3.9 30 11-40 140-169 (474)
157 3u4t_A TPR repeat-containing p 57.3 13 0.00044 31.8 5.1 32 11-42 77-108 (272)
158 3ro3_A PINS homolog, G-protein 57.1 11 0.00039 28.6 4.3 34 9-42 50-83 (164)
159 2w2u_A Hypothetical P60 katani 56.6 18 0.00061 27.4 5.1 33 5-37 16-48 (83)
160 3ro2_A PINS homolog, G-protein 56.1 15 0.00051 31.9 5.3 35 7-41 4-38 (338)
161 4h7y_A Dual specificity protei 55.9 17 0.00057 31.2 5.3 40 9-50 95-134 (161)
162 2ho1_A Type 4 fimbrial biogene 55.8 14 0.00049 31.2 5.1 32 9-40 142-173 (252)
163 2vq2_A PILW, putative fimbrial 55.8 13 0.00044 30.4 4.6 30 11-40 116-145 (225)
164 1wfd_A Hypothetical protein 15 55.5 15 0.0005 28.4 4.5 33 5-37 12-44 (93)
165 2c2l_A CHIP, carboxy terminus 55.3 12 0.00041 33.6 4.7 31 11-41 41-71 (281)
166 2q7f_A YRRB protein; TPR, prot 54.7 12 0.00041 31.2 4.3 30 11-40 60-89 (243)
167 2if4_A ATFKBP42; FKBP-like, al 54.0 7.1 0.00024 36.4 2.9 35 6-40 177-211 (338)
168 4gyw_A UDP-N-acetylglucosamine 53.3 14 0.00049 38.7 5.5 33 8-40 9-41 (723)
169 4eqf_A PEX5-related protein; a 53.2 12 0.0004 34.0 4.3 34 8-41 65-98 (365)
170 1orj_A Flagellar protein FLIS; 53.1 10 0.00034 31.4 3.4 33 6-38 27-63 (130)
171 3cv0_A Peroxisome targeting si 52.7 14 0.00048 32.2 4.6 33 8-40 21-53 (327)
172 3hym_B Cell division cycle pro 52.4 14 0.00049 32.2 4.6 34 9-42 23-56 (330)
173 2q7f_A YRRB protein; TPR, prot 52.3 15 0.00051 30.6 4.5 26 15-40 98-123 (243)
174 3sf4_A G-protein-signaling mod 51.6 17 0.00059 32.8 5.1 35 7-41 8-42 (406)
175 1zu2_A Mitochondrial import re 51.1 6.2 0.00021 33.7 1.8 17 24-40 62-78 (158)
176 2v6x_A Vacuolar protein sortin 51.1 19 0.00066 27.0 4.5 33 5-37 10-42 (85)
177 1fch_A Peroxisomal targeting s 50.8 15 0.00052 32.9 4.6 31 11-41 67-97 (368)
178 1wao_1 Serine/threonine protei 50.5 13 0.00043 36.6 4.3 30 12-41 78-107 (477)
179 3qou_A Protein YBBN; thioredox 48.6 16 0.00054 32.8 4.3 33 9-41 220-252 (287)
180 3fp2_A TPR repeat-containing p 48.5 20 0.00067 34.1 5.2 33 9-41 60-92 (537)
181 1x58_A Hypothetical protein 49 48.2 58 0.002 23.4 6.3 47 92-138 7-58 (62)
182 2gw1_A Mitochondrial precursor 48.1 27 0.00091 32.8 6.0 31 11-41 42-72 (514)
183 4eqf_A PEX5-related protein; a 47.6 16 0.00056 33.0 4.3 31 11-41 102-132 (365)
184 4abn_A Tetratricopeptide repea 47.5 16 0.00056 35.5 4.5 35 7-41 257-291 (474)
185 1wao_1 Serine/threonine protei 46.8 21 0.00073 34.9 5.3 35 7-41 39-73 (477)
186 1w3b_A UDP-N-acetylglucosamine 46.8 15 0.00052 33.6 4.0 31 11-41 70-100 (388)
187 1qqe_A Vesicular transport pro 46.7 16 0.00055 32.7 4.0 34 8-41 77-110 (292)
188 2dl1_A Spartin; SPG20, MIT, st 46.5 26 0.00089 28.4 4.7 32 5-36 19-50 (116)
189 3hym_B Cell division cycle pro 46.2 20 0.00069 31.2 4.6 31 11-41 239-269 (330)
190 1fch_A Peroxisomal targeting s 45.8 18 0.00063 32.4 4.3 31 11-41 101-131 (368)
191 3cv0_A Peroxisome targeting si 45.2 20 0.00067 31.3 4.3 34 8-41 172-205 (327)
192 3mkr_A Coatomer subunit epsilo 43.6 37 0.0012 30.5 6.0 30 12-41 134-163 (291)
193 4gyw_A UDP-N-acetylglucosamine 43.3 18 0.00062 37.9 4.3 31 11-41 114-144 (723)
194 2vsy_A XCC0866; transferase, g 42.9 15 0.00052 36.2 3.5 29 12-40 61-89 (568)
195 1w3b_A UDP-N-acetylglucosamine 42.5 13 0.00046 34.0 2.8 28 13-40 4-31 (388)
196 1qqe_A Vesicular transport pro 41.9 39 0.0013 30.1 5.8 31 12-42 162-192 (292)
197 2vsy_A XCC0866; transferase, g 41.8 22 0.00075 35.0 4.5 31 11-41 94-124 (568)
198 4a1s_A PINS, partner of inscut 41.7 32 0.0011 31.4 5.4 37 8-44 343-379 (411)
199 2ond_A Cleavage stimulation fa 41.4 25 0.00084 31.6 4.4 20 21-40 182-201 (308)
200 3ly7_A Transcriptional activat 41.0 28 0.00096 33.8 4.9 31 18-48 320-350 (372)
201 3edt_B KLC 2, kinesin light ch 40.8 31 0.001 29.1 4.8 33 5-37 124-156 (283)
202 3eab_A Spastin; spastin, MIT, 40.7 17 0.00059 28.1 2.7 32 5-36 13-47 (89)
203 3gw4_A Uncharacterized protein 40.6 26 0.0009 28.2 4.1 31 12-42 151-181 (203)
204 2ifu_A Gamma-SNAP; membrane fu 40.1 32 0.0011 30.8 5.0 28 10-37 157-184 (307)
205 4fm3_A Uncharacterized hypothe 40.0 38 0.0013 26.6 4.6 29 7-35 33-61 (98)
206 4b4t_Q 26S proteasome regulato 38.8 25 0.00086 32.5 4.1 31 11-41 7-37 (434)
207 2ifu_A Gamma-SNAP; membrane fu 38.7 25 0.00086 31.6 4.0 32 7-39 115-146 (307)
208 3u64_A Protein TP_0956; tetrat 38.3 24 0.00082 33.3 3.8 23 21-43 217-239 (301)
209 1ouv_A Conserved hypothetical 37.7 32 0.0011 29.7 4.5 32 6-37 4-35 (273)
210 3nf1_A KLC 1, kinesin light ch 37.5 42 0.0014 28.8 5.2 34 4-37 23-56 (311)
211 3mv2_B Coatomer subunit epsilo 37.2 40 0.0014 31.7 5.3 25 15-39 143-167 (310)
212 3gw4_A Uncharacterized protein 37.2 47 0.0016 26.6 5.2 31 7-37 65-95 (203)
213 3edt_B KLC 2, kinesin light ch 37.0 48 0.0017 27.8 5.4 34 5-38 82-115 (283)
214 3o10_A Sacsin; all-helical dom 36.8 27 0.00092 28.8 3.6 35 3-37 4-45 (141)
215 2cqq_A RSGI RUH-037, DNAJ homo 36.7 76 0.0026 23.2 5.7 50 92-141 7-61 (72)
216 2pzi_A Probable serine/threoni 36.6 17 0.00058 37.4 2.8 32 10-41 435-466 (681)
217 3nf1_A KLC 1, kinesin light ch 36.3 31 0.0011 29.7 4.1 36 5-40 192-227 (311)
218 2xpi_A Anaphase-promoting comp 36.2 45 0.0015 32.2 5.7 36 6-41 198-233 (597)
219 4g1t_A Interferon-induced prot 36.1 30 0.001 32.4 4.3 31 12-42 338-368 (472)
220 3u3w_A Transcriptional activat 36.0 30 0.001 30.7 4.0 33 9-41 197-229 (293)
221 2h6f_A Protein farnesyltransfe 35.8 31 0.001 32.9 4.3 26 15-40 138-164 (382)
222 3q15_A PSP28, response regulat 35.6 46 0.0016 30.5 5.4 30 11-40 264-293 (378)
223 2e2a_A Protein (enzyme IIA); h 34.2 61 0.0021 25.7 5.1 34 5-38 17-50 (105)
224 3rjv_A Putative SEL1 repeat pr 34.2 74 0.0025 26.7 6.2 36 8-43 125-164 (212)
225 1klx_A Cysteine rich protein B 33.9 52 0.0018 25.9 4.8 37 3-39 75-128 (138)
226 1wcr_A PTS system, N, N'-diace 33.8 62 0.0021 25.5 5.1 34 5-38 15-48 (103)
227 2h6f_A Protein farnesyltransfe 33.8 43 0.0015 31.8 5.0 37 5-41 94-130 (382)
228 3ulq_A Response regulator aspa 32.9 38 0.0013 31.1 4.3 36 7-42 142-177 (383)
229 3k1s_A PTS system, cellobiose- 32.7 66 0.0022 25.6 5.1 34 5-38 19-52 (109)
230 3ro2_A PINS homolog, G-protein 32.3 40 0.0014 29.0 4.1 32 10-41 85-116 (338)
231 3ulq_A Response regulator aspa 32.2 39 0.0013 31.0 4.3 35 8-42 184-218 (383)
232 2vkj_A TM1634; membrane protei 32.2 89 0.003 24.3 5.4 41 7-47 52-92 (106)
233 3u64_A Protein TP_0956; tetrat 31.7 42 0.0014 31.6 4.4 39 2-40 217-272 (301)
234 3l8r_A PTCA, putative PTS syst 31.6 69 0.0023 26.0 5.1 33 6-38 35-67 (120)
235 4g1t_A Interferon-induced prot 30.4 38 0.0013 31.7 3.9 29 13-41 252-280 (472)
236 3dza_A Uncharacterized putativ 30.0 60 0.002 28.5 4.7 35 7-41 34-68 (191)
237 2qfc_A PLCR protein; TPR, HTH, 29.6 47 0.0016 29.3 4.2 31 10-40 198-228 (293)
238 1ouv_A Conserved hypothetical 28.8 68 0.0023 27.5 5.1 26 14-39 188-217 (273)
239 3ly7_A Transcriptional activat 28.7 37 0.0013 32.9 3.5 37 14-50 283-319 (372)
240 2qfc_A PLCR protein; TPR, HTH, 28.3 69 0.0024 28.2 5.1 36 6-41 73-108 (293)
241 3rjv_A Putative SEL1 repeat pr 28.1 59 0.002 27.3 4.5 32 7-38 17-48 (212)
242 2ond_A Cleavage stimulation fa 28.0 48 0.0016 29.5 4.0 30 12-41 103-132 (308)
243 1klx_A Cysteine rich protein B 28.0 75 0.0026 24.9 4.8 28 10-37 59-90 (138)
244 3sf4_A G-protein-signaling mod 27.5 48 0.0016 29.8 3.9 32 10-41 89-120 (406)
245 4f3v_A ESX-1 secretion system 27.0 62 0.0021 29.9 4.6 33 16-48 216-248 (282)
246 4fx5_A VON willebrand factor t 26.2 60 0.002 32.1 4.6 36 5-40 379-414 (464)
247 3q15_A PSP28, response regulat 26.2 57 0.0019 29.9 4.3 35 7-41 140-174 (378)
248 2rpa_A Katanin P60 ATPase-cont 25.1 87 0.003 23.4 4.3 35 3-37 7-41 (78)
249 1o3u_A Conserved hypothetical 23.7 1.1E+02 0.0037 24.6 5.1 42 5-50 13-54 (135)
250 2xze_A STAM-binding protein; h 23.7 84 0.0029 26.1 4.4 32 7-38 39-70 (146)
251 2ooe_A Cleavage stimulation fa 23.6 60 0.0021 31.4 4.1 30 10-40 15-44 (530)
252 2cfu_A SDSA1; SDS-hydrolase, l 23.4 98 0.0033 32.0 5.8 43 8-50 449-492 (658)
253 2cjj_A Radialis; plant develop 23.3 1.1E+02 0.0037 23.5 4.7 46 92-137 7-58 (93)
254 3n71_A Histone lysine methyltr 23.3 80 0.0027 31.3 4.9 34 7-40 308-341 (490)
255 2xpi_A Anaphase-promoting comp 23.1 86 0.003 30.1 5.1 30 11-40 519-548 (597)
256 2crb_A Nuclear receptor bindin 22.6 87 0.003 24.4 3.9 24 12-35 19-42 (97)
257 2juh_A Telomere binding protei 22.5 3.1E+02 0.01 22.1 7.7 77 93-169 17-103 (121)
258 1vp7_A Exodeoxyribonuclease VI 21.2 1.6E+02 0.0056 23.0 5.3 37 4-40 31-69 (100)
259 4a3n_A Transcription factor SO 20.9 1.2E+02 0.0043 20.9 4.4 41 129-173 14-54 (71)
260 3u3w_A Transcriptional activat 20.8 1.1E+02 0.0037 26.8 4.9 29 11-39 158-186 (293)
261 2ooe_A Cleavage stimulation fa 20.1 84 0.0029 30.3 4.3 32 10-41 48-79 (530)
No 1
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.86 E-value=2e-22 Score=164.60 Aligned_cols=97 Identities=33% Similarity=0.640 Sum_probs=68.1
Q ss_pred cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHHHHHHcCChhhhhhhcccCCCCCCCCCCCCC
Q 018317 110 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHT 188 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~-~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 188 (358)
..|||+||||+++++.++||++||+|++++|||+++ .+.+++.|+.|++||++|+||.+|..||.+|..+......
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~--- 78 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGM--- 78 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCc---
Confidence 469999999999999999999999999999999998 4788999999999999999999999999999876542111
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHhhCC
Q 018317 189 RAARGFNGFYDSDIDAEEIFRNFFFG 214 (358)
Q Consensus 189 ~~~~~~~g~~~~~~~~ed~F~~fFgg 214 (358)
+.+ ++ ...+++.++|..||++
T Consensus 79 -~~~---~~-~~~~~~~~~f~~~f~~ 99 (103)
T 1bq0_A 79 -GGG---GF-GGGADFSDIFGDVFGD 99 (103)
T ss_dssp --------------------------
T ss_pred -CCC---CC-CCCCCHHHHHHHHHHh
Confidence 011 11 1122456788888764
No 2
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=7.6e-21 Score=151.70 Aligned_cols=82 Identities=40% Similarity=0.668 Sum_probs=77.2
Q ss_pred CCCCCCCCHHHHHHHHHhhccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhh
Q 018317 90 SSTSPAYTEEQIAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESR 169 (358)
Q Consensus 90 ~~~~~~~t~e~~~~~~~~~~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR 169 (358)
......|+.++.+.+..+....|||+||||+++++.++||++||+|++++||||++.+++.++|+.|++||++|+||.+|
T Consensus 6 s~~~~~~s~~~~~~~~~~~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R 85 (90)
T 2ys8_A 6 SGSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKS 85 (90)
T ss_dssp CCCCCCCCHHHHHHHHHHHTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCC
T ss_pred CccccCCCHHHHHHHHHHhcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccc
Confidence 34466899999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hh
Q 018317 170 KK 171 (358)
Q Consensus 170 ~~ 171 (358)
..
T Consensus 86 ~~ 87 (90)
T 2ys8_A 86 GP 87 (90)
T ss_dssp SC
T ss_pred cC
Confidence 74
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.83 E-value=9.3e-21 Score=146.57 Aligned_cols=72 Identities=40% Similarity=0.795 Sum_probs=68.0
Q ss_pred cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCCCCCC
Q 018317 110 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPV 181 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~~ 181 (358)
..|||+||||+++++.++||++||+|++++|||+++.+++.+.|+.|++||++|+||.+|..||.+|.++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 368999999999999999999999999999999999889999999999999999999999999999986543
No 4
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.6e-20 Score=145.59 Aligned_cols=71 Identities=58% Similarity=0.949 Sum_probs=67.4
Q ss_pred ccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCCCC
Q 018317 109 KTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDE 179 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~ 179 (358)
...|||+||||+++++.++||++||+|++++|||++..+++.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 35799999999999999999999999999999999988889999999999999999999999999998764
No 5
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=3.1e-20 Score=147.37 Aligned_cols=71 Identities=48% Similarity=0.790 Sum_probs=67.8
Q ss_pred ccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCCCC
Q 018317 109 KTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDE 179 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~ 179 (358)
...|||+||||+++++.++||++||+|++++|||+++.+.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 36899999999999999999999999999999999998999999999999999999999999999998754
No 6
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=4.3e-20 Score=143.41 Aligned_cols=71 Identities=41% Similarity=0.777 Sum_probs=66.5
Q ss_pred ccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHHHHHHcCChhhhhhhcccCCCC
Q 018317 109 KTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGSDE 179 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~-~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~ 179 (358)
...|||+||||+++++.++||++||+|++++|||+++ .+.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 3579999999999999999999999999999999998 4788999999999999999999999999998754
No 7
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.9e-20 Score=148.66 Aligned_cols=71 Identities=39% Similarity=0.787 Sum_probs=67.1
Q ss_pred cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCCCCC
Q 018317 110 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 180 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~ 180 (358)
..|||+||||+++++.++||++||+|++++|||+++.+.+.+.|+.|++||++|+||.+|..||.+|..+.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 57999999999999999999999999999999999988889999999999999999999999999987543
No 8
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.80 E-value=7.4e-20 Score=140.13 Aligned_cols=70 Identities=39% Similarity=0.791 Sum_probs=62.6
Q ss_pred hhccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCCC
Q 018317 107 IKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 178 (358)
Q Consensus 107 ~~~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~ 178 (358)
+....|||+||||+++++.++||++||+|++++|||+++ ++.+.|+.|++||++|+||.+|..||.+|.+
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNP--DGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCT--TCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCc--CHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 346789999999999999999999999999999999985 4478999999999999999999999999863
No 9
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=7.8e-20 Score=142.93 Aligned_cols=71 Identities=45% Similarity=0.737 Sum_probs=65.5
Q ss_pred cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCC--ChHHHHHHHHHHHHHcCChhhhhhhcccCCCCC
Q 018317 110 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAP--GAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 180 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~--~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~ 180 (358)
..|||+||||+++++.++||++||+|++++|||+++.. .+.+.|+.|++||++|+||.+|..||.+|..+.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 47999999999999999999999999999999999754 577899999999999999999999999987653
No 10
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.79 E-value=3.7e-20 Score=148.19 Aligned_cols=72 Identities=39% Similarity=0.711 Sum_probs=65.5
Q ss_pred hhccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCCCCC
Q 018317 107 IKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 180 (358)
Q Consensus 107 ~~~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~ 180 (358)
+....|||+||||+++++.++||++||+|++++|||+++ +..+.|+.|++||++|+||.+|..||.+|.+..
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPT--GDTEKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTT--CCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--ChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 345689999999999999999999999999999999985 457899999999999999999999999987543
No 11
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=1.9e-19 Score=143.86 Aligned_cols=72 Identities=46% Similarity=0.761 Sum_probs=66.1
Q ss_pred cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCC--ChHHHHHHHHHHHHHcCChhhhhhhcccCCCCCC
Q 018317 110 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAP--GAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPV 181 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~--~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~~ 181 (358)
..|||+||||+++++.++||++||+|++++|||+++.. .+++.|+.|++||++|+||.+|..||.+|..+..
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 81 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWR 81 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 46999999999999999999999999999999999753 5788999999999999999999999999886543
No 12
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=1.2e-19 Score=147.40 Aligned_cols=71 Identities=41% Similarity=0.699 Sum_probs=63.9
Q ss_pred CChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCC--ChHHHHHHHHHHHHHcCChhhhhhhcccCCCCCC
Q 018317 111 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAP--GAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPV 181 (358)
Q Consensus 111 ~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~--~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~~ 181 (358)
.|||+||||+++++.++||++||+|++++|||+++.. .+.+.|+.|++||++|+||.+|..||.+|.++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 5899999999999999999999999999999999754 4788999999999999999999999999876544
No 13
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=9.2e-19 Score=141.90 Aligned_cols=69 Identities=29% Similarity=0.536 Sum_probs=64.3
Q ss_pred ccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHHHHHHcCChhhhhhhcccCC
Q 018317 109 KTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGS 177 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~-~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~ 177 (358)
...|||+||||+++++.++||++||+|++++|||+++ .+.+.++|+.|++||+||+||.+|..||....
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 3579999999999999999999999999999999996 57789999999999999999999999998654
No 14
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=2.2e-19 Score=148.73 Aligned_cols=70 Identities=36% Similarity=0.641 Sum_probs=66.4
Q ss_pred cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHHHHHHcCChhhhhhhcccCCCC
Q 018317 110 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGSDE 179 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~-~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~ 179 (358)
..|||+||||+++++.++||+|||+|++++||||++ .+.+.++|+.|++||++|+||.+|..||.+|..+
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 589999999999999999999999999999999998 6789999999999999999999999999988654
No 15
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.76 E-value=3.8e-20 Score=180.03 Aligned_cols=102 Identities=28% Similarity=0.490 Sum_probs=0.0
Q ss_pred cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCCCCCCCCCCCCCC
Q 018317 110 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTR 189 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~ 189 (358)
..|||+||||+++|+.++||+|||+|+++||||+++.+.++++|+.|++||++|+||.+|+.||+++...... ......
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~-~~~~~~ 105 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDP-GFGRQR 105 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCC-Cccccc
Confidence 4799999999999999999999999999999999998899999999999999999999999999985432110 000000
Q ss_pred CCCCCCCCCCCCCCHHHHHHHhhCCC
Q 018317 190 AARGFNGFYDSDIDAEEIFRNFFFGG 215 (358)
Q Consensus 190 ~~~~~~g~~~~~~~~ed~F~~fFggg 215 (358)
...+.+| + ..+++|+|+.|||++
T Consensus 106 -~~~~~~f-~-~~~f~diF~~~Fg~~ 128 (329)
T 3lz8_A 106 -QTHEQSY-S-QQDFDDIFSSMFGQQ 128 (329)
T ss_dssp --------------------------
T ss_pred -ccccCCc-C-CCchhhhhHhhhcCc
Confidence 0001122 1 224679999999863
No 16
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.76 E-value=4.1e-19 Score=142.21 Aligned_cols=69 Identities=39% Similarity=0.708 Sum_probs=63.9
Q ss_pred ccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-------CChHHHHHHHHHHHHHcCChhhhhhhcccCC
Q 018317 109 KTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKA-------PGAEEAFKAVSKAFQCLSNDESRKKYDITGS 177 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~-------~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~ 177 (358)
...|||+||||+++++.++||++||+|++++|||+++. +.+.+.|+.|++||++|+||.+|..||....
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 46899999999999999999999999999999999874 4578899999999999999999999999765
No 17
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=1.1e-18 Score=144.01 Aligned_cols=71 Identities=41% Similarity=0.730 Sum_probs=65.7
Q ss_pred ccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHHHHHHcCChhhhhhhcccCCCC
Q 018317 109 KTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGSDE 179 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~-~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~ 179 (358)
...|||+||||+++++.++||++||+|++++|||+++ .+.+.++|+.|++||++|+||.+|..||.+|..+
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG 86 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence 3579999999999999999999999999999999997 4678899999999999999999999999988643
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.72 E-value=1.5e-18 Score=142.92 Aligned_cols=70 Identities=33% Similarity=0.562 Sum_probs=65.2
Q ss_pred ccCChhhhhCcCCCC-CHHHHHHHHHHHHHhhCCCCCCC----CChHHHHHHHHHHHHHcCChhhhhhhcccCCC
Q 018317 109 KTKDFYEILGVERSC-TVEDVRKSYRKLSLKVHPDKNKA----PGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 178 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~a-~~~eIkkayrklal~~HPDk~~~----~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~ 178 (358)
...|||+||||++++ +.++||+|||+|++++|||+++. +.+.+.|+.|++||++|+||.+|..||.+|..
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 468999999999999 99999999999999999999975 56789999999999999999999999998754
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.71 E-value=1.1e-17 Score=151.08 Aligned_cols=71 Identities=37% Similarity=0.777 Sum_probs=66.8
Q ss_pred CChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHHHHHHcCChhhhhhhcccCCCCCC
Q 018317 111 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPV 181 (358)
Q Consensus 111 ~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~-~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~~ 181 (358)
.|||+||||+++++.++||+|||+|++++||||++ .+.+.++|+.|++||++|+||.+|..||.+|..+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 58999999999999999999999999999999996 678899999999999999999999999999987643
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.68 E-value=3e-17 Score=143.18 Aligned_cols=68 Identities=34% Similarity=0.695 Sum_probs=62.7
Q ss_pred cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCC-------hHHHHHHHHHHHHHcCChhhhhhhcccCC
Q 018317 110 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG-------AEEAFKAVSKAFQCLSNDESRKKYDITGS 177 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~-------a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~ 177 (358)
..|||+||||+++++.++||+|||+|++++||||++... +.+.|+.|++||++|+||.+|+.||..+.
T Consensus 9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 579999999999999999999999999999999998653 56899999999999999999999998653
No 21
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.66 E-value=1.1e-17 Score=139.00 Aligned_cols=65 Identities=26% Similarity=0.379 Sum_probs=60.7
Q ss_pred cCChhhhhCcCCCCCH--HHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCC
Q 018317 110 TKDFYEILGVERSCTV--EDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGS 177 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~--~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~ 177 (358)
..+||+||||+++++. ++||+|||+|++++||||++. .++|+.|++||+||+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999998 999999999999999999864 5799999999999999999999998875
No 22
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.63 E-value=1.4e-16 Score=124.02 Aligned_cols=64 Identities=19% Similarity=0.408 Sum_probs=57.8
Q ss_pred CChhhhhCcCCC--CCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCCC
Q 018317 111 KDFYEILGVERS--CTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 178 (358)
Q Consensus 111 ~d~Y~iLgv~~~--a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~ 178 (358)
.++|+||||+++ ++.++||++||+|++++|||++ +..+.|+.|++||++|+|+.+|..+ .+|..
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~---~~~~~f~~i~~AYe~L~~~~~r~~~-~~g~~ 76 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLWGTFKTEVYNLRM-NLGGT 76 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS---CCHHHHHHHHHHHHHHHHHHHHHTT-CCSSC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CCHHHHHHHHHHHHHHhhHHHHHHH-hcCCc
Confidence 579999999999 9999999999999999999997 4578999999999999999999984 45543
No 23
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.62 E-value=5.1e-17 Score=144.21 Aligned_cols=65 Identities=26% Similarity=0.412 Sum_probs=58.3
Q ss_pred cCChhhhhCcCCCCC--HHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhcccCC
Q 018317 110 TKDFYEILGVERSCT--VEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGS 177 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~--~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~ 177 (358)
..|||+||||+++++ .++||+|||++++++||||+++ +++|+.|++||++|+||.+|+.||.+|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 468999999999998 6999999999999999999865 4799999999999999999999999996
No 24
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.61 E-value=3.3e-16 Score=139.38 Aligned_cols=67 Identities=19% Similarity=0.379 Sum_probs=61.1
Q ss_pred cCChhhhhCcCCCCC--HHHHHHHHHHHHHhhCCCCCCCCC------hHHHHHHHHHHHHHcCChhhhhhhcccC
Q 018317 110 TKDFYEILGVERSCT--VEDVRKSYRKLSLKVHPDKNKAPG------AEEAFKAVSKAFQCLSNDESRKKYDITG 176 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~--~~eIkkayrklal~~HPDk~~~~~------a~~~fk~i~~Ay~vLsd~~kR~~YD~~g 176 (358)
..|||+||||+++++ .++||++||+|++++||||++... +.+.|+.|++||+||+||.+|..||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 479999999999987 999999999999999999998654 5688999999999999999999999754
No 25
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.60 E-value=1e-15 Score=135.82 Aligned_cols=67 Identities=19% Similarity=0.375 Sum_probs=61.0
Q ss_pred CChhhhhCcCCCC--CHHHHHHHHHHHHHhhCCCCCCCCC------hHHHHHHHHHHHHHcCChhhhhhhcccCC
Q 018317 111 KDFYEILGVERSC--TVEDVRKSYRKLSLKVHPDKNKAPG------AEEAFKAVSKAFQCLSNDESRKKYDITGS 177 (358)
Q Consensus 111 ~d~Y~iLgv~~~a--~~~eIkkayrklal~~HPDk~~~~~------a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~ 177 (358)
.|||+||||++++ +..+||++||+|++++||||++... +.+.|+.|++||+||+||.+|..||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 4899999999999 9999999999999999999998654 34689999999999999999999998654
No 26
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.59 E-value=2.6e-16 Score=124.97 Aligned_cols=60 Identities=27% Similarity=0.334 Sum_probs=55.1
Q ss_pred CChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCC--ChHHHHHHHHHHHHHcCChhhhh
Q 018317 111 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAP--GAEEAFKAVSKAFQCLSNDESRK 170 (358)
Q Consensus 111 ~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~--~a~~~fk~i~~Ay~vLsd~~kR~ 170 (358)
.++|+||||+++++.++||+|||+|+++||||+++.. .++++|+.|++||++|+|...|.
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence 5789999999999999999999999999999999753 47899999999999999987773
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.58 E-value=4.6e-16 Score=138.96 Aligned_cols=62 Identities=31% Similarity=0.473 Sum_probs=58.5
Q ss_pred CChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHHHHHHcCChhhhhhh
Q 018317 111 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG----AEEAFKAVSKAFQCLSNDESRKKY 172 (358)
Q Consensus 111 ~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~----a~~~fk~i~~Ay~vLsd~~kR~~Y 172 (358)
.|||+||||+++++.++||+|||+|++++||||++... ++++|+.|++||++|+|+.+|..|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 69999999999999999999999999999999997654 788999999999999999999987
No 28
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.56 E-value=1.6e-15 Score=138.45 Aligned_cols=67 Identities=25% Similarity=0.428 Sum_probs=59.8
Q ss_pred ccCChhhhhCcCCC--CCHHHHHHHHHHHHHhhCCCCCCCCC------hHHHHHHHHHHHHHcCChhhhhhhccc
Q 018317 109 KTKDFYEILGVERS--CTVEDVRKSYRKLSLKVHPDKNKAPG------AEEAFKAVSKAFQCLSNDESRKKYDIT 175 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~--a~~~eIkkayrklal~~HPDk~~~~~------a~~~fk~i~~Ay~vLsd~~kR~~YD~~ 175 (358)
...|||+||||+++ ++.++||++||+|++++||||++... +.+.|+.|++||+||+||.+|..||..
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~ 115 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK 115 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 35799999999986 78999999999999999999997543 456799999999999999999999953
No 29
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.55 E-value=7.8e-16 Score=123.10 Aligned_cols=59 Identities=29% Similarity=0.396 Sum_probs=52.3
Q ss_pred hhcc-CChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHHHHHHcCC
Q 018317 107 IKKT-KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG----AEEAFKAVSKAFQCLSN 165 (358)
Q Consensus 107 ~~~~-~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~----a~~~fk~i~~Ay~vLsd 165 (358)
+... .++|++|||++.++.++||+|||++++++||||++... ++++|+.|++||+||.+
T Consensus 28 ~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 28 VLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp TSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 3334 59999999999999999999999999999999997543 78899999999999964
No 30
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.54 E-value=8.5e-16 Score=126.12 Aligned_cols=57 Identities=26% Similarity=0.402 Sum_probs=51.8
Q ss_pred cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCC--------hHHHHHHHHHHHHHcCChh
Q 018317 110 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG--------AEEAFKAVSKAFQCLSNDE 167 (358)
Q Consensus 110 ~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~--------a~~~fk~i~~Ay~vLsd~~ 167 (358)
..|||+|||++. |+.++||+|||++++++||||++.++ |+++|+.|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 479999999996 99999999999999999999987533 5789999999999999985
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.52 E-value=4.3e-15 Score=113.19 Aligned_cols=56 Identities=25% Similarity=0.354 Sum_probs=51.6
Q ss_pred CChhhhhCcCC-CCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhh
Q 018317 111 KDFYEILGVER-SCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESR 169 (358)
Q Consensus 111 ~d~Y~iLgv~~-~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR 169 (358)
.++|+||||++ +++.++||++||+|++++|||++ +..+.|+.|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhc
Confidence 47899999999 79999999999999999999996 5678999999999999998765
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.51 E-value=3.8e-15 Score=133.26 Aligned_cols=65 Identities=26% Similarity=0.485 Sum_probs=59.6
Q ss_pred ccCChhhhh------CcCC-CCCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhccc
Q 018317 109 KTKDFYEIL------GVER-SCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDIT 175 (358)
Q Consensus 109 ~~~d~Y~iL------gv~~-~a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~ 175 (358)
...|||+|| |+++ +++..+||++||+|++++||||++. +.+.|+.|++||+||+||.+|..||..
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 357999999 4665 8999999999999999999999965 788999999999999999999999984
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.47 E-value=6.7e-15 Score=156.79 Aligned_cols=73 Identities=36% Similarity=0.758 Sum_probs=40.9
Q ss_pred ccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CCChHHHHHHHHHHHHHcCChhhhhhhcccCCCCCC
Q 018317 109 KTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPV 181 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~-~~~a~~~fk~i~~Ay~vLsd~~kR~~YD~~g~~~~~ 181 (358)
...|||+||||+++|+.++||+|||+|++++||||++ .+.+.++|+.|++||++|+||.+|+.||++|.++..
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~ 92 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 92 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence 4689999999999999999999999999999999995 678899999999999999999999999999986654
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.44 E-value=1.8e-13 Score=132.27 Aligned_cols=66 Identities=41% Similarity=0.701 Sum_probs=56.9
Q ss_pred ccCChhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCCC----hHHHHHHHHHHHHHcCChhhhhhhcc
Q 018317 109 KTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG----AEEAFKAVSKAFQCLSNDESRKKYDI 174 (358)
Q Consensus 109 ~~~d~Y~iLgv~~~a~~~eIkkayrklal~~HPDk~~~~~----a~~~fk~i~~Ay~vLsd~~kR~~YD~ 174 (358)
...++|++||+.+.++.++|+++|+++++++|||+.+.+. +++.|+.|++||++|+||++|..||.
T Consensus 380 ~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 380 QKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp HSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred cchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 3679999999999999999999999999999999997644 78899999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.62 E-value=3.2e-08 Score=73.86 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=45.9
Q ss_pred hhhhhCcCCC---CCHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCC
Q 018317 113 FYEILGVERS---CTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSN 165 (358)
Q Consensus 113 ~Y~iLgv~~~---a~~~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd 165 (358)
=|.||||+++ ++.++|+++||+|....||||. +..-...+|++|+++|..
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHH
Confidence 3789999999 9999999999999999999996 778889999999999864
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.94 E-value=0.0011 Score=69.36 Aligned_cols=131 Identities=16% Similarity=0.183 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCcccc---CCCCCCCC
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESDPNTNPNGPSAEPNSKPSDQSTIRH---RGPSTGAS 85 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 85 (358)
.-+..+|..++..|++++|+..+.+|++++|.. +...+............. .......+. .-.
T Consensus 535 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-~~a~~~~~~~~~~~~~~~--------~~~~~~~~~A~~~l~----- 600 (681)
T 2pzi_A 535 SAAFGLARARSAEGDRVGAVRTLDEVPPTSRHF-TTARLTSAVTLLSGRSTS--------EVTEEQIRDAARRVE----- 600 (681)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTH-HHHHHHHHHHTC---------------CCHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhhcccCccc-HHHHHHHHHHHHccCCCC--------CCCHHHHHHHHHHHh-----
Confidence 346788888999999999999999999999983 322222221111000000 000000000 000
Q ss_pred CCCCCCCCCCCCHHHHHHHH-----HhhccCChhhhhCcCCCCCH--HHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHH
Q 018317 86 PSASSSTSPAYTEEQIAIVR-----QIKKTKDFYEILGVERSCTV--EDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSK 158 (358)
Q Consensus 86 ~~~~~~~~~~~t~e~~~~~~-----~~~~~~d~Y~iLgv~~~a~~--~eIkkayrklal~~HPDk~~~~~a~~~fk~i~~ 158 (358)
.. .........-...+.. .....+|||+|||++.+... .+|+++||+||+..+++ .+.+..|..
T Consensus 601 -~~-~~~~~~~~~l~~~ll~~~l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~ 671 (681)
T 2pzi_A 601 -AL-PPTEPRVLQIRALVLGGALDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDM 671 (681)
T ss_dssp -TS-CTTSTTHHHHHHHHHHHHHHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHH
T ss_pred -hC-CCCcHHHHHHHHHHHHHHHHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHH
Confidence 00 0000000011111111 22347889999999776655 67999999999975554 578999999
Q ss_pred HHHH
Q 018317 159 AFQC 162 (358)
Q Consensus 159 Ay~v 162 (358)
|..|
T Consensus 672 a~~v 675 (681)
T 2pzi_A 672 ANKV 675 (681)
T ss_dssp HHHH
T ss_pred hccc
Confidence 9886
No 37
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=93.63 E-value=0.098 Score=41.81 Aligned_cols=37 Identities=32% Similarity=0.349 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.|.|....+++..+++.|++++|+.++.+|++++|..
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~ 41 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN 41 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4788889999999999999999999999999999983
No 38
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=93.30 E-value=0.13 Score=41.10 Aligned_cols=39 Identities=26% Similarity=0.288 Sum_probs=35.9
Q ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 3 GNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-|-+.|+...+.+..+++.|++++|+..+.+|++++|..
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~ 46 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN 46 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 367788889999999999999999999999999999983
No 39
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=92.36 E-value=0.2 Score=38.93 Aligned_cols=36 Identities=22% Similarity=0.170 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.|..+..+|..++..|++++|+..+.+|++++|..
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 37 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED 37 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 467889999999999999999999999999999983
No 40
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=92.18 E-value=0.13 Score=42.27 Aligned_cols=39 Identities=15% Similarity=0.178 Sum_probs=34.6
Q ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 3 GNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+.+.+..++.+|..+++.|++++|++++.+|++++|..
T Consensus 26 ~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~ 64 (150)
T 4ga2_A 26 SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD 64 (150)
T ss_dssp SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 345667778899999999999999999999999999983
No 41
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=91.38 E-value=0.25 Score=39.33 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=30.4
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhhc
Q 018317 13 KIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIE 51 (358)
Q Consensus 13 ~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~~ 51 (358)
.++..+...|++++|++++.+|+.++|++++...|..++
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~~~~~~~l~~le 126 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVKELE 126 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcCHHHHHHHHHhC
Confidence 344556678999999999999999999976655565553
No 42
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=90.97 E-value=0.33 Score=36.17 Aligned_cols=35 Identities=14% Similarity=0.107 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+..+..+|..++..|++++|++.+.+|++++|..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 37 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN 37 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 56778999999999999999999999999999983
No 43
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=90.56 E-value=0.38 Score=39.32 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=35.8
Q ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 3 GNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-+...|..+..+|..++..|++++|+..+.+|++++|..
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~ 44 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN 44 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC
Confidence 356788999999999999999999999999999999983
No 44
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=90.29 E-value=0.39 Score=39.65 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+.-...++..++..||+++|++.+++|++++|..
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~ 38 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN 38 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 45567899999999999999999999999999983
No 45
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=90.11 E-value=0.52 Score=36.42 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDP 39 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~P 39 (358)
|+-|++|+..++..|++..|+.|+.+|+++.+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~ 36 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLD 36 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhh
Confidence 56799999999999999999999999999863
No 46
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=90.00 E-value=0.55 Score=33.57 Aligned_cols=36 Identities=31% Similarity=0.526 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.+.-+..+|..++..|++++|++++.+|++++|..
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 42 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 42 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 456778999999999999999999999999999973
No 47
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=89.84 E-value=0.25 Score=42.53 Aligned_cols=36 Identities=14% Similarity=0.109 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
..+|..++.++...++.|+++.|+..+.||++++|+
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~ 43 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT 43 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC
Confidence 468999999999999999999999999999999998
No 48
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=89.56 E-value=0.3 Score=37.00 Aligned_cols=37 Identities=19% Similarity=0.447 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
+.+.-+..+|..++..|++++|++.+.+|++++|...
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 41 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPDYV 41 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Confidence 3455688999999999999999999999999999843
No 49
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=89.32 E-value=0.46 Score=35.15 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.+..+..+|..++..|++++|++++.+++.++|..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 37 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN 37 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 357778999999999999999999999999999973
No 50
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=89.11 E-value=0.51 Score=37.57 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=14.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 14 IGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 14 iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+|..++..|++++|++.+.+|++++|.
T Consensus 87 lg~~~~~~~~~~~A~~~~~~al~l~P~ 113 (126)
T 4gco_A 87 KAACLVAMREWSKAQRAYEDALQVDPS 113 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCcC
Confidence 344445555555555555555555554
No 51
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=88.34 E-value=0.9 Score=36.27 Aligned_cols=39 Identities=18% Similarity=0.179 Sum_probs=35.2
Q ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 3 GNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+-+.+..+..+|..++..|++++|++.+.++++++|..
T Consensus 13 ~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~ 51 (142)
T 2xcb_A 13 LSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD 51 (142)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc
Confidence 456778889999999999999999999999999999983
No 52
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=87.98 E-value=0.5 Score=35.10 Aligned_cols=31 Identities=13% Similarity=0.198 Sum_probs=27.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|++.+.+|++++|..
T Consensus 41 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 41 YSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 4556778889999999999999999999985
No 53
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=87.57 E-value=0.91 Score=34.13 Aligned_cols=36 Identities=36% Similarity=0.507 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.|..+..+|..++..|++++|+..+.+++.++|..
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 37 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN 37 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc
Confidence 467788999999999999999999999999999973
No 54
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=87.47 E-value=0.58 Score=39.01 Aligned_cols=30 Identities=10% Similarity=-0.021 Sum_probs=16.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..+|..++..|++++|+..+.+|++++|.
T Consensus 73 ~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~ 102 (151)
T 3gyz_A 73 IMGLAAIYQIKEQFQQAADLYAVAFALGKN 102 (151)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhCCC
Confidence 444555555555555555555555555554
No 55
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=87.26 E-value=1.1 Score=37.37 Aligned_cols=39 Identities=13% Similarity=-0.050 Sum_probs=35.5
Q ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 3 GNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-|-+.+.-+..+|..++..|++++|++.+.+|++++|..
T Consensus 31 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~ 69 (151)
T 3gyz_A 31 IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN 69 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 456778889999999999999999999999999999983
No 56
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=87.17 E-value=0.68 Score=33.04 Aligned_cols=31 Identities=32% Similarity=0.590 Sum_probs=27.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|++.+.+|++++|..
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 46 WYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 4566777889999999999999999999974
No 57
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=86.84 E-value=0.92 Score=34.12 Aligned_cols=43 Identities=19% Similarity=0.139 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhh
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSI 50 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~ 50 (358)
+.-+..+|..++..|++++|++++.++++++|...+...+..+
T Consensus 79 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~ 121 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQA 121 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 4456778888999999999999999999999975554444444
No 58
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=86.43 E-value=0.97 Score=36.69 Aligned_cols=41 Identities=12% Similarity=0.057 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHh
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISS 49 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~ 49 (358)
+.-+..+|..++..|++++|+..+.+|++++|. .+..+...
T Consensus 63 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~ 103 (162)
T 3rkv_A 63 IPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRR 103 (162)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHH
Confidence 344667788889999999999999999999998 45444433
No 59
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=86.07 E-value=0.69 Score=34.04 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
-+..+|..++..|++++|++.+.+|++++|...
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 355566777788889999999999999988754
No 60
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=85.97 E-value=1.1 Score=33.61 Aligned_cols=41 Identities=17% Similarity=0.366 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhhcC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIES 52 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~~~ 52 (358)
..+.+++..+..|+++.|+.-+-+|+++||.+. +||..+++
T Consensus 19 ~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~--~LL~i~q~ 59 (73)
T 3ax2_A 19 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQ--QLLQVLQQ 59 (73)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCH--HHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHH--HHHHHHHh
Confidence 468899999999999999999999999999954 67776653
No 61
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=85.78 E-value=0.75 Score=35.05 Aligned_cols=36 Identities=31% Similarity=0.419 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.+.-+..+|..++..|++++|++.+.+|++++|..
T Consensus 17 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 52 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY 52 (115)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc
Confidence 345567889999999999999999999999999984
No 62
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=85.66 E-value=0.65 Score=36.01 Aligned_cols=37 Identities=14% Similarity=0.115 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
...+..+..+|..++..|++++|+..+.+|++++|..
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~ 42 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV 42 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc
Confidence 3456778999999999999999999999999999984
No 63
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.54 E-value=0.73 Score=35.84 Aligned_cols=37 Identities=24% Similarity=0.274 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+.+..+..+|..++..|++++|++.++++++++|..
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 61 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP 61 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc
Confidence 3567789999999999999999999999999999973
No 64
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=85.32 E-value=1.2 Score=34.31 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+.+.-+..+|..++..|++++|++.+.+|++++|..
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 60 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH 60 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 4556667888999999999999999999999999984
No 65
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=85.10 E-value=0.9 Score=35.04 Aligned_cols=32 Identities=19% Similarity=0.033 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-+..+|..++..|++++|+..+.+|++++|..
T Consensus 40 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 71 (126)
T 3upv_A 40 GYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 71 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 34566778889999999999999999999983
No 66
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=84.70 E-value=1.4 Score=32.94 Aligned_cols=38 Identities=24% Similarity=0.352 Sum_probs=34.2
Q ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 4 NKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 4 NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+...+.-+..+|..++..|++++|+.++.+++.++|..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 45 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN 45 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC
Confidence 34677889999999999999999999999999999973
No 67
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=84.62 E-value=1.7 Score=37.13 Aligned_cols=45 Identities=11% Similarity=0.191 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC-CHHHHHHhhcC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL-PVDDIISSIES 52 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~-~~~~ll~~~~~ 52 (358)
.+....+|..+++.||+++|++++++++++.|.- .+..|...++.
T Consensus 71 rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~ 116 (152)
T 1pc2_A 71 RDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDK 116 (152)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 3456788888899999999999999999999974 36666655543
No 68
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=84.61 E-value=1.8 Score=35.19 Aligned_cols=39 Identities=15% Similarity=0.085 Sum_probs=34.9
Q ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 3 GNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-+-+.+.....+|..++..|++++|+..+.+|+.++|..
T Consensus 16 ~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~ 54 (148)
T 2vgx_A 16 ISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD 54 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc
Confidence 455677788999999999999999999999999999983
No 69
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=84.42 E-value=1.5 Score=34.77 Aligned_cols=37 Identities=30% Similarity=0.310 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+.|..+..+|..++..|++++|++.+.+|++++|..
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~ 46 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN 46 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 3578889999999999999999999999999999983
No 70
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=84.08 E-value=1 Score=33.04 Aligned_cols=31 Identities=26% Similarity=0.290 Sum_probs=28.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+..|..++..|++++|++.+.++++++|..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 33 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVG 33 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc
Confidence 4678889999999999999999999999984
No 71
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=84.06 E-value=1 Score=35.36 Aligned_cols=30 Identities=17% Similarity=0.160 Sum_probs=16.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
++.+|..++..|++++|+..+.+|++++|.
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~ 49 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPE 49 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 444555555555555555555555555554
No 72
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=82.82 E-value=1.9 Score=35.02 Aligned_cols=31 Identities=13% Similarity=0.156 Sum_probs=26.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|+..+.+|++++|..
T Consensus 68 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 98 (150)
T 4ga2_A 68 HRFLGLLYELEENTDKAVECYRRSVELNPTQ 98 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHhCCCC
Confidence 4556667888999999999999999999983
No 73
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=82.71 E-value=1.8 Score=36.36 Aligned_cols=37 Identities=16% Similarity=0.081 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
+.|..+..+|..++..|++++|++.+.+|++++|...
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~ 72 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTE 72 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccc
Confidence 4678899999999999999999999999999999854
No 74
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=82.30 E-value=1.3 Score=36.08 Aligned_cols=32 Identities=19% Similarity=0.111 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-+..+|..++..|++++|+..+.+|++++|..
T Consensus 47 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 78 (164)
T 3sz7_A 47 YLSNRAAAYSASGQHEKAAEDAELATVVDPKY 78 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 35567778899999999999999999999983
No 75
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=82.28 E-value=1.5 Score=34.36 Aligned_cols=39 Identities=31% Similarity=0.277 Sum_probs=31.9
Q ss_pred CChHHHHHHHHHH---------------HHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 3 GNKDDALKCFKIG---------------KEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 3 ~NkdeA~rc~~iA---------------~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
++.++|+.+++.| ..++..|++++|+..+.+|++++|..
T Consensus 31 g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4567777777655 45677899999999999999999984
No 76
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.89 E-value=2.2 Score=32.93 Aligned_cols=33 Identities=24% Similarity=0.021 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+.-+..+|..++..|++++|+..+.++++++|.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 97 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG 97 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc
Confidence 344555555555556666666666666666554
No 77
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=81.80 E-value=2.2 Score=30.93 Aligned_cols=30 Identities=10% Similarity=0.029 Sum_probs=22.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..+|..++..|++++|++.+.++++++|.
T Consensus 43 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 43 WLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 344566667778888888888888888876
No 78
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=81.62 E-value=1.8 Score=34.16 Aligned_cols=41 Identities=17% Similarity=0.379 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhhcC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIES 52 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~~~ 52 (358)
..+.+++..+..|+++.|+..+-+|+++||. ..+||..++.
T Consensus 22 ~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q--P~~LL~i~q~ 62 (95)
T 1om2_A 22 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ--PQQLLQVLQQ 62 (95)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC--HHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC--HHHHHHHHHh
Confidence 4688999999999999999999999999999 4467777654
No 79
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=80.96 E-value=1.6 Score=34.78 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
+..+|..++..|++++|+..+.+|++++|...
T Consensus 55 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 86 (142)
T 2xcb_A 55 FLGLGACRQSLGLYEQALQSYSYGALMDINEP 86 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc
Confidence 45567788899999999999999999999843
No 80
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=80.96 E-value=1.7 Score=32.81 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+..+..+|..++..|++++|++.+.++++++|..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 49 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD 49 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 45568899999999999999999999999999973
No 81
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=80.95 E-value=2.8 Score=31.86 Aligned_cols=29 Identities=21% Similarity=0.331 Sum_probs=14.9
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
..+|..++..|++++|+..+.++++++|.
T Consensus 80 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 80 LKLGLSQYGEGKNTEAQQTLQQVATQYPG 108 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 33444445555555555555555555554
No 82
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=80.74 E-value=2.4 Score=32.51 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=27.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
...+|..+++.|++++|+.++++|+++.|...
T Consensus 49 ~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 49 LDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 34566777888999999999999999999953
No 83
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=80.61 E-value=2.5 Score=34.41 Aligned_cols=41 Identities=20% Similarity=0.296 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC-HHHHHHhhc
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSLP-VDDIISSIE 51 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~-~~~ll~~~~ 51 (358)
+..+|..++..|++++|+..+.++++++|... ...++..+.
T Consensus 118 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~ 159 (177)
T 2e2e_A 118 LMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN 159 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 45566677888999999999999999999753 444554443
No 84
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=80.37 E-value=2.1 Score=32.30 Aligned_cols=30 Identities=13% Similarity=-0.001 Sum_probs=15.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..+|..++..|++++|++++.+|++++|.
T Consensus 53 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 82 (133)
T 2lni_A 53 YSNRAACYTKLLEFQLALKDCEECIQLEPT 82 (133)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 444444445555555555555555555554
No 85
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=80.12 E-value=3.2 Score=34.63 Aligned_cols=33 Identities=12% Similarity=0.067 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
-+..+|..++..|++++|+..+.+|++++|...
T Consensus 123 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 123 VLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 345566668899999999999999999999754
No 86
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=80.10 E-value=2.5 Score=32.06 Aligned_cols=31 Identities=10% Similarity=0.041 Sum_probs=24.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
...+|..++..|++++|+..+.++++++|..
T Consensus 42 ~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 42 LYWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 4556777778888888888888888888874
No 87
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=79.99 E-value=2.3 Score=32.48 Aligned_cols=30 Identities=10% Similarity=-0.014 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 13 KIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 13 ~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
.+|..++..|++++|+..+.++++++|...
T Consensus 66 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 95 (117)
T 3k9i_A 66 FYAMVLYNLGRYEQGVELLLKIIAETSDDE 95 (117)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Confidence 345567888999999999999999999853
No 88
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=79.97 E-value=4 Score=34.78 Aligned_cols=28 Identities=11% Similarity=0.120 Sum_probs=25.6
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 14 IGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 14 iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+|..++..|++++|+..+.+|++++|..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 7888889999999999999999999983
No 89
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=79.95 E-value=2.4 Score=30.98 Aligned_cols=31 Identities=19% Similarity=0.121 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
-+..+|..++..|++++|+..+.++++++|.
T Consensus 40 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 70 (118)
T 1elw_A 40 LYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD 70 (118)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhCcc
Confidence 3455566666666666666666666666665
No 90
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=79.82 E-value=3.4 Score=34.93 Aligned_cols=34 Identities=24% Similarity=0.112 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLD 38 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~ 38 (358)
+.+|+.+..+|..++..|++++|+.++.++++++
T Consensus 2 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 35 (258)
T 3uq3_A 2 GSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH 35 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 6789999999999999999999999999999999
No 91
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=79.76 E-value=3 Score=30.74 Aligned_cols=34 Identities=32% Similarity=0.530 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.-+..+|..++..|++++|++++.++++++|..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 42 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 42 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc
Confidence 5668899999999999999999999999999973
No 92
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=79.66 E-value=1.6 Score=35.30 Aligned_cols=32 Identities=19% Similarity=0.077 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
..|..+..++..++..|++++|+..+.+|+++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~ 40 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTR 40 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999
No 93
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=79.58 E-value=2.2 Score=40.51 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+.|..++.+|..++..|++++|++.+.++++++|.
T Consensus 4 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 38 (514)
T 2gw1_A 4 KYALALKDKGNQFFRNKKYDDAIKYYNWALELKED 38 (514)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc
Confidence 45555666666666666666666666666666654
No 94
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=79.53 E-value=1.9 Score=33.15 Aligned_cols=30 Identities=17% Similarity=0.029 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..+|..++..|++++|+..+.+|++++|.
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 75 (137)
T 3q49_B 46 YTNRALCYLKMQQPEQALADCRRALELDGQ 75 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCch
Confidence 455677788999999999999999999998
No 95
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=78.96 E-value=1.1 Score=32.69 Aligned_cols=33 Identities=24% Similarity=0.406 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.-+..+|..++..|++++|+..+.++++++|..
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 39 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE 39 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC
Confidence 346778899999999999999999999999983
No 96
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=78.50 E-value=2 Score=34.89 Aligned_cols=31 Identities=19% Similarity=0.116 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|+..+.+|++++|..
T Consensus 58 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 88 (148)
T 2vgx_A 58 FLGLGACRQAMGQYDLAIHSYSYGAVMDIXE 88 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 4456667889999999999999999999984
No 97
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=77.51 E-value=3.7 Score=33.86 Aligned_cols=42 Identities=12% Similarity=0.240 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC-CHHHHHHhhc
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL-PVDDIISSIE 51 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~-~~~~ll~~~~ 51 (358)
...-+|..+++.||+++|++++...+++.|.- .+..|...|+
T Consensus 76 ~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 76 YVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 35678888999999999999999999999974 3666665554
No 98
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=76.79 E-value=2.7 Score=31.25 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-+..+|..++..|++++|++++.++++++|..
T Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 79 (131)
T 2vyi_A 48 YFCNRAAAYSKLGNYAGAVQDCERAICIDPAY 79 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhcCccC
Confidence 35567778889999999999999999999983
No 99
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=76.74 E-value=0.53 Score=39.08 Aligned_cols=39 Identities=21% Similarity=0.200 Sum_probs=31.5
Q ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 3 GNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+|..+....+..|..++..|++++|+..+.++++++|..
T Consensus 1 ~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~ 39 (176)
T 2r5s_A 1 SNASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSR 39 (176)
T ss_dssp -----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTS
T ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc
Confidence 466666678899999999999999999999999999984
No 100
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=76.33 E-value=2.6 Score=32.20 Aligned_cols=35 Identities=14% Similarity=0.049 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHhhCCC
Q 018317 6 DDALKCFKIGKEALESGD---RARAIKFLSKARRLDPS 40 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd---~~~A~kf~~kA~~L~Pt 40 (358)
+.+......|...+..++ .++|+.++.+|++++|.
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~ 41 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY 41 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC
Confidence 445667777877765665 68999999999999998
No 101
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=76.26 E-value=1.4 Score=33.12 Aligned_cols=31 Identities=13% Similarity=0.122 Sum_probs=26.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..+...|++++|+..+.+|+++.|..
T Consensus 44 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 44 YYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 4455667888999999999999999998864
No 102
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=76.24 E-value=2.2 Score=36.59 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=19.3
Q ss_pred CCHHHHHHHHHHHHhhCCCCC
Q 018317 22 GDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 22 gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
|++++|++++.||++++|...
T Consensus 105 g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 105 HNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCH
T ss_pred ccHHHHHHHHHHHHHhCCCCH
Confidence 599999999999999999854
No 103
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=76.04 E-value=2.6 Score=34.42 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..+|..++..|++++|+..+.++++++|.
T Consensus 110 ~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~ 139 (184)
T 3vtx_A 110 YYKLGLVYDSMGEHDKAIEAYEKTISIKPG 139 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHhcch
Confidence 455677778888999999999999999887
No 104
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=75.87 E-value=3 Score=30.69 Aligned_cols=32 Identities=31% Similarity=0.567 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-+..+|..++..|++++|++++.++++++|..
T Consensus 45 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 76 (125)
T 1na0_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc
Confidence 35567778889999999999999999999873
No 105
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=75.83 E-value=3.3 Score=35.29 Aligned_cols=31 Identities=13% Similarity=0.156 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|+..+++|++++|..
T Consensus 91 ~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 91 LEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 4456667888999999999999999999983
No 106
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=75.41 E-value=4.1 Score=33.63 Aligned_cols=39 Identities=15% Similarity=0.104 Sum_probs=34.4
Q ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 3 GNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+.+.+.-+..+|..++..|++++|++.+.++++++|..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 41 (225)
T 2vq2_A 3 KANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKN 41 (225)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc
Confidence 456777888999999999999999999999999999984
No 107
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=75.28 E-value=2.9 Score=34.95 Aligned_cols=30 Identities=30% Similarity=0.338 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
..+|..++..|++++|++++.+|++++|..
T Consensus 126 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 126 YKLGVANMYFGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 344555667778888888888888887764
No 108
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=74.92 E-value=4.2 Score=34.00 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC-HHHHHHhhc
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSLP-VDDIISSIE 51 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~-~~~ll~~~~ 51 (358)
.+.-+|..+++.||+++|++++...+++.|.-. |..|...|+
T Consensus 80 ~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie 122 (134)
T 3o48_A 80 CLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVE 122 (134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Confidence 456678888888999999999999999999853 555655554
No 109
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=73.84 E-value=3.3 Score=32.63 Aligned_cols=31 Identities=16% Similarity=-0.010 Sum_probs=27.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|+..+.++++++|..
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 80 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIELDKKY 80 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 4556777889999999999999999999973
No 110
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=72.92 E-value=1.5 Score=33.21 Aligned_cols=31 Identities=26% Similarity=0.147 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|+..+.+|++++|..
T Consensus 56 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 56 WKWLGKTLQGQGDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcccc
Confidence 4556777888999999999999999999964
No 111
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=72.91 E-value=4.4 Score=36.02 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+++.++.+|..++..|++++|+..+.++++++|.
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~ 35 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD 35 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc
Confidence 4566778888888888888888888888888887
No 112
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=72.52 E-value=5.7 Score=33.58 Aligned_cols=43 Identities=12% Similarity=0.157 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC-CHHHHHHhhcC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL-PVDDIISSIES 52 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~-~~~~ll~~~~~ 52 (358)
.+.-+|..+++.||+.+|+++++..+++.|.- .+..|...|+.
T Consensus 79 cLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~ 122 (144)
T 1y8m_A 79 CLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED 122 (144)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 45678888999999999999999999999985 36666555543
No 113
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=72.51 E-value=5.3 Score=30.37 Aligned_cols=40 Identities=20% Similarity=-0.026 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC-CHHHHHHhh
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL-PVDDIISSI 50 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~-~~~~ll~~~ 50 (358)
.+-++..+++.|++++|+..+.+++..+|.. ....+...|
T Consensus 46 ~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~i~~~I 86 (93)
T 3bee_A 46 LSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVTIIESI 86 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 4455667899999999999999999999982 233344443
No 114
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=72.33 E-value=6.1 Score=36.70 Aligned_cols=40 Identities=18% Similarity=0.110 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHH
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIIS 48 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~ 48 (358)
+.-+..+|..++..|++++|+..+.+|++++|. .+..+..
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~ 235 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSR 235 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHH
Confidence 455778888999999999999999999999998 4444443
No 115
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=71.17 E-value=6.2 Score=37.55 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHH
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDII 47 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll 47 (358)
+.-+..+|..+++.|++++|+.++.+|++++|. .+..+.
T Consensus 273 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~ 311 (370)
T 1ihg_A 273 LSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALY 311 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHH
Confidence 344556777788999999999999999999997 444443
No 116
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=70.93 E-value=4.2 Score=30.10 Aligned_cols=32 Identities=31% Similarity=0.565 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-+..+|..++..|++++|++++.++++++|..
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 34 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 34 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc
Confidence 36778888899999999999999999999873
No 117
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=70.80 E-value=2.8 Score=34.15 Aligned_cols=34 Identities=15% Similarity=0.066 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.-+..+|..++..|++++|+..+.+|++++|..
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 77 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN 77 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 3457788889999999999999999999999984
No 118
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=70.44 E-value=3.5 Score=35.99 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.+.....+|..++..|++++|+..+.++++++|..
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~ 48 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH 48 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Confidence 456678888999999999999999999999999975
No 119
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=69.98 E-value=5.3 Score=32.76 Aligned_cols=33 Identities=9% Similarity=0.120 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.-...+|..++..|++++|+..+.++++++|..
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 345677888899999999999999999999974
No 120
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=69.92 E-value=6.1 Score=32.65 Aligned_cols=33 Identities=15% Similarity=0.308 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLD 38 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~ 38 (358)
|.|.+.+..|+.+++.||++++-..+.||+.+-
T Consensus 34 dgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii 66 (131)
T 3iqc_A 34 EGILRFSSQAKRCIENEDIEKKIYYINRVTDIF 66 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999998864
No 121
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=69.71 E-value=6.8 Score=33.12 Aligned_cols=36 Identities=19% Similarity=0.132 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCH
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPV 43 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~ 43 (358)
+.-++.+|..++..|++++|+.++.+|++++|....
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~ 42 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDS 42 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCc
Confidence 356888999999999999999999999999984343
No 122
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=69.29 E-value=6.1 Score=32.07 Aligned_cols=37 Identities=14% Similarity=0.216 Sum_probs=29.6
Q ss_pred CCCC---hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 1 MDGN---KDDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 1 Me~N---kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
|.++ .+.|...+..|...-.+|++++|+.+|..|+.+
T Consensus 8 m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 8 MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 4444 577888888888888889999999998888775
No 123
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=69.29 E-value=6.7 Score=35.34 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.-.+..|..++..|++++|+..+.+|++++|..
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~ 150 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQN 150 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc
Confidence 3456889999999999999999999999999984
No 124
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=69.21 E-value=5.2 Score=38.05 Aligned_cols=43 Identities=12% Similarity=0.146 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC-HHHHHHhh
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLP-VDDIISSI 50 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~-~~~ll~~~ 50 (358)
+.-+..+|..++..|++++|++.+.+|++++|... +...|..+
T Consensus 307 ~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~ 350 (370)
T 1ihg_A 307 TKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 350 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 33456677888999999999999999999999843 33344433
No 125
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=69.09 E-value=5.8 Score=34.52 Aligned_cols=33 Identities=12% Similarity=-0.006 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
..+.+|..++..|++++|+..+.++++++|...
T Consensus 150 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 150 KQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 347889999999999999999999999999754
No 126
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=68.63 E-value=6.5 Score=32.64 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-+..+|..++..|++++|++.+.+|++++|..
T Consensus 39 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 70 (213)
T 1hh8_A 39 ICFNIGCMYTILKNMTEAEKAFTRSINRDKHL 70 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 35567888889999999999999999999973
No 127
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=68.32 E-value=8 Score=32.54 Aligned_cols=38 Identities=24% Similarity=0.239 Sum_probs=32.6
Q ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 4 NKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 4 NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.+.+.-+..+|..++..|++++|++.+.++++++|..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 172 (258)
T 3uq3_A 135 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED 172 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc
Confidence 34556667788889999999999999999999999983
No 128
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=68.26 E-value=7.7 Score=37.80 Aligned_cols=42 Identities=14% Similarity=0.119 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhh
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSI 50 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~ 50 (358)
+.-+..+|..+++.|++++|+..|.+|++++|. .+..+....
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g 358 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRG 358 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHH
Confidence 445667888999999999999999999999998 555554443
No 129
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=68.21 E-value=5.7 Score=34.08 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
....+|..++..|++++|+..++++++++|.
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~ 36 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNRYPF 36 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 4556666666666666666666666666665
No 130
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=68.17 E-value=3 Score=33.13 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=31.1
Q ss_pred CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 1 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 1 Me~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
|......+.-+..+|..++..|++++|+..+.++++++|..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 41 (186)
T 3as5_A 1 MGNDDIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFD 41 (186)
T ss_dssp ---CCHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC
T ss_pred CCccchhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC
Confidence 33344566777888888888899999999999999888863
No 131
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=67.36 E-value=6.3 Score=35.46 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
|..+..+|..++..|++++|+..+.+|++++|..
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~ 37 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV 37 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc
Confidence 5567888999999999999999999999999973
No 132
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=67.26 E-value=7.5 Score=35.80 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=34.4
Q ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 4 NKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 4 NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+...+..++.+|..++..|++++|+.++.+|++++|..
T Consensus 44 ~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~ 81 (411)
T 4a1s_A 44 GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTED 81 (411)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC
T ss_pred hhHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccC
Confidence 45678888899999999999999999999999999984
No 133
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=67.22 E-value=5.9 Score=33.55 Aligned_cols=29 Identities=10% Similarity=0.082 Sum_probs=15.9
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
..+|..++..|++++|+..+.++++++|.
T Consensus 80 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 108 (228)
T 4i17_A 80 IGKSAAYRDMKNNQEYIATLTEGIKAVPG 108 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 33444455555555555555555555555
No 134
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=66.91 E-value=7.5 Score=32.73 Aligned_cols=40 Identities=23% Similarity=0.365 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhh
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSI 50 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~ 50 (358)
|.|++.+..|+.+++.||++++-..+.||+.+- .+|...+
T Consensus 31 dgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii-----~eL~~sL 70 (145)
T 1vh6_A 31 NGCLKFIRLAAQAIENDDMERKNENLIKAQNII-----QELNFTL 70 (145)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-----HHHHHHc
Confidence 789999999999999999999999999999885 3455555
No 135
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=66.33 E-value=6.2 Score=34.99 Aligned_cols=27 Identities=15% Similarity=0.019 Sum_probs=14.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 14 IGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 14 iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+|..++..|++++|+..+.+|++++|.
T Consensus 312 ~~~~~~~~g~~~~A~~~~~~a~~~~p~ 338 (359)
T 3ieg_A 312 RAEAYLIEEMYDEAIQDYEAAQEHNEN 338 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 333444455555555555555555554
No 136
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=66.22 E-value=5.7 Score=36.93 Aligned_cols=37 Identities=11% Similarity=0.007 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
+.|..+..+|..++..|++++|+..+.+|++++|...
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~ 181 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYES 181 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccc
Confidence 5677889999999999999999999999999999863
No 137
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=66.13 E-value=8.2 Score=32.91 Aligned_cols=39 Identities=13% Similarity=-0.024 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-------CCCCCHHHH
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRL-------DPSLPVDDI 46 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L-------~Pt~~~~~l 46 (358)
.|.-+..++......|++++|+..+.+|+++ +|. .+..+
T Consensus 56 ~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~ 101 (159)
T 2hr2_A 56 DAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLW 101 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHH
Confidence 3446777777888889999999999999999 997 55555
No 138
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=65.90 E-value=6 Score=29.18 Aligned_cols=31 Identities=32% Similarity=0.588 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|++.+.++++++|..
T Consensus 38 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 68 (136)
T 2fo7_A 38 WYNLGNAYYKQGDYDEAIEYYQKALELDPRS 68 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc
Confidence 4456677788999999999999999999974
No 139
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=65.86 E-value=8.4 Score=32.95 Aligned_cols=35 Identities=23% Similarity=0.131 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
+.-+..+|..++..|++++|+..+.+|+.++|...
T Consensus 215 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 249 (275)
T 1xnf_A 215 SETNFYLGKYYLSLGDLDSATALFKLAVANNVHNF 249 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTC
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchhH
Confidence 55677889999999999999999999999999643
No 140
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=65.33 E-value=6.5 Score=36.60 Aligned_cols=36 Identities=8% Similarity=0.014 Sum_probs=29.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHH
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDII 47 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll 47 (358)
+..+|..++..|++++|+..|.+|++++|. .+..+.
T Consensus 233 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~ 268 (338)
T 2if4_A 233 HLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALF 268 (338)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHH
Confidence 456788889999999999999999999997 444443
No 141
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=64.78 E-value=8.7 Score=32.83 Aligned_cols=36 Identities=25% Similarity=0.187 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.+.-+..+|..++..|++++|+..+.+|++++|..
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 76 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM 76 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc
Confidence 456667888889999999999999999999999983
No 142
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=64.76 E-value=8.2 Score=32.97 Aligned_cols=30 Identities=13% Similarity=0.117 Sum_probs=23.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
..+|..++..|++++|+..+.+|++++|..
T Consensus 43 ~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 72 (217)
T 2pl2_A 43 YWLARTQLKLGLVNPALENGKTLVARTPRY 72 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 345566778888999999999999998873
No 143
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=64.42 E-value=5.6 Score=38.08 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
.|..+..+|..++..|++++|++.+.++++++|.
T Consensus 24 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 57 (537)
T 3fp2_A 24 YAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN 57 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC
Confidence 3455555555566666666666666666666554
No 144
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=64.05 E-value=5.2 Score=34.24 Aligned_cols=29 Identities=21% Similarity=0.174 Sum_probs=23.5
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 13 KIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 13 ~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+|..++..|++++|+..+.++++++|..
T Consensus 156 ~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 156 ALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 34555778899999999999999999984
No 145
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=63.61 E-value=8.9 Score=32.82 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
.+.+|..++..|++++|+..+.++++++|...
T Consensus 44 ~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~ 75 (225)
T 2yhc_A 44 QLDLIYAYYKNADLPLAQAAIDRFIRLNPTHP 75 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCC
Confidence 55667788899999999999999999999854
No 146
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=63.55 E-value=8.2 Score=35.97 Aligned_cols=37 Identities=30% Similarity=0.398 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 4 NKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 4 NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+-+.+.-++.+|..++..|++++|++.+.++++++|.
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~ 58 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD 58 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc
Confidence 4456677788888888888888888888888888876
No 147
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=61.45 E-value=9.1 Score=29.24 Aligned_cols=37 Identities=19% Similarity=0.143 Sum_probs=28.4
Q ss_pred CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 1 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 1 Me~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
|+.---.|...+..|..+-.+|++++|+.++..|+.+
T Consensus 9 ~~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 9 MDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4444456778888888888999999999998888754
No 148
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=61.35 E-value=8.3 Score=33.11 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
-.+..|..++..|++++|++.+.++++++|...
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 37 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSP 37 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH
Confidence 367889999999999999999999999999843
No 149
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=61.13 E-value=8.5 Score=30.30 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.-+..+|..++..|++++|+..+.++++++|..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 75 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDN 75 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 3446677888899999999999999999999973
No 150
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=60.74 E-value=11 Score=36.78 Aligned_cols=37 Identities=14% Similarity=-0.000 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
+.|..+..++..+++.|++++|++.+.+|++++|...
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~ 302 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEY 302 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccc
Confidence 5677888999999999999999999999999999863
No 151
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=60.72 E-value=16 Score=25.55 Aligned_cols=32 Identities=31% Similarity=0.193 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
.+|.|..+-|..++.-.|..-|++-+.+|+++
T Consensus 18 ~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~l 49 (53)
T 2rkl_A 18 EQIQKLAKYAISALNYEDLPTAKDELTKALDL 49 (53)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999986
No 152
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=59.76 E-value=16 Score=33.04 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=27.7
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHH
Q 018317 13 KIGKEALESGDRARAIKFLSKARRLDPSLPVDDIIS 48 (358)
Q Consensus 13 ~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~ 48 (358)
.+|..++..|++++|+..+.+|++++|. .+..+..
T Consensus 205 ~la~~~~~~g~~~eA~~~l~~al~~~p~-~~~~l~~ 239 (291)
T 3mkr_A 205 GQAACHMAQGRWEAAEGVLQEALDKDSG-HPETLIN 239 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHH
Confidence 3455678899999999999999999998 5544433
No 153
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=59.09 E-value=8.4 Score=32.69 Aligned_cols=34 Identities=29% Similarity=0.340 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.-+..+|..++..|++++|+..+.+++.++|..
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~ 70 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS 70 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh
Confidence 7778899999999999999999999999999873
No 154
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=58.48 E-value=9.6 Score=29.07 Aligned_cols=36 Identities=8% Similarity=0.025 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
..|.-+..+|..++..|++++|++.+.+|+.+.+..
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 42 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF 42 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 456678889999999999999999999999998764
No 155
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=58.09 E-value=16 Score=27.52 Aligned_cols=33 Identities=27% Similarity=0.263 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
.+.|...+..|.+.=++|++.+|+.++..|+.+
T Consensus 8 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 478888999999999999999999887776654
No 156
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=57.46 E-value=7.4 Score=38.01 Aligned_cols=30 Identities=20% Similarity=0.135 Sum_probs=22.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..+|..++..|++++|+..+.+|++++|.
T Consensus 140 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 169 (474)
T 4abn_A 140 WNQLGEVYWKKGDVTSAHTCFSGALTHCKN 169 (474)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 444555667778888888888888888887
No 157
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=57.28 E-value=13 Score=31.81 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
+..+|..++..|++++|++.+.+|++++|...
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~ 108 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL 108 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcccH
Confidence 56677778899999999999999999999853
No 158
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=57.12 E-value=11 Score=28.63 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
.-+..+|..++..|++++|++++.+|+++.+...
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 83 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK 83 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Confidence 3456677788899999999999999999988643
No 159
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=56.55 E-value=18 Score=27.38 Aligned_cols=33 Identities=24% Similarity=0.142 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
.+.|...+..|.+.-++|++++|+.++..|+.+
T Consensus 16 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 468888888898899999999999988777654
No 160
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=56.11 E-value=15 Score=31.86 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+..++..|..++..|++++|+.++.+|++++|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~ 38 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTED 38 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCccc
Confidence 35567778999999999999999999999999984
No 161
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=55.91 E-value=17 Score=31.20 Aligned_cols=40 Identities=13% Similarity=0.182 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhh
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSI 50 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~ 50 (358)
.-|+.-|+=-+..||+.+|++.+.+|+.+.|-+. +||+.+
T Consensus 95 Kiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~--~~le~a 134 (161)
T 4h7y_A 95 FVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL--EMLEIA 134 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH--HHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH--HHHHHH
Confidence 3455666667889999999999999999999843 455444
No 162
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=55.78 E-value=14 Score=31.17 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
.-+..+|..++..|++++|++.+.++++++|.
T Consensus 142 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 142 RVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 33445555566667777777777777777665
No 163
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=55.77 E-value=13 Score=30.45 Aligned_cols=30 Identities=17% Similarity=0.238 Sum_probs=19.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..+|..++..|++++|+..+.++++++|.
T Consensus 116 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 145 (225)
T 2vq2_A 116 NLNKGICSAKQGQFGLAEAYLKRSLAAQPQ 145 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 444555566667777777777777777665
No 164
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=55.46 E-value=15 Score=28.41 Aligned_cols=33 Identities=12% Similarity=0.084 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
-+.|...+..|...-.+|++++|+.++..|+.+
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 367888888888889999999999988877665
No 165
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=55.31 E-value=12 Score=33.56 Aligned_cols=31 Identities=16% Similarity=0.006 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
...+|..++..|++++|++.+.+|++++|..
T Consensus 41 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 71 (281)
T 2c2l_A 41 YTNRALCYLKMQQPEQALADCRRALELDGQS 71 (281)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 4456677889999999999999999999983
No 166
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=54.72 E-value=12 Score=31.24 Aligned_cols=30 Identities=27% Similarity=0.331 Sum_probs=14.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..+|..++..|++++|++.+.++++++|.
T Consensus 60 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 89 (243)
T 2q7f_A 60 YINFANLLSSVNELERALAFYDKALELDSS 89 (243)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 334444444444444444444444444443
No 167
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=54.00 E-value=7.1 Score=36.35 Aligned_cols=35 Identities=11% Similarity=-0.037 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+.|..+..++..++..|++++|+..+.+|++++|.
T Consensus 177 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~ 211 (338)
T 2if4_A 177 GAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD 211 (338)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc
Confidence 57888999999999999999999999999999997
No 168
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=53.28 E-value=14 Score=38.67 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
|+-...+|..+.+.|++++|++.++||++++|.
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~ 41 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 41 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 334455555555555555555555555555555
No 169
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=53.24 E-value=12 Score=33.95 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.-++.+|..++..|++++|++.+.++++++|..
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 98 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD 98 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC
Confidence 3347788888888888888888888888888873
No 170
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=53.13 E-value=10 Score=31.36 Aligned_cols=33 Identities=12% Similarity=0.341 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHhcCCH-HHH---HHHHHHHHhhC
Q 018317 6 DDALKCFKIGKEALESGDR-ARA---IKFLSKARRLD 38 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~-~~A---~kf~~kA~~L~ 38 (358)
|.|++.+..|+.+++.||+ +++ -..+.||+.+-
T Consensus 27 dgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii 63 (130)
T 1orj_A 27 DKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDII 63 (130)
T ss_dssp HHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999 988 66688888764
No 171
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=52.66 E-value=14 Score=32.23 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..++.+|..++..|++++|+.++.++++++|.
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 53 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPE 53 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 345677788888888888888888888888886
No 172
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=52.37 E-value=14 Score=32.24 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
.-++.+|..++..|++++|++.+.++++.+|...
T Consensus 23 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~ 56 (330)
T 3hym_B 23 DVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHA 56 (330)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCh
Confidence 3467889999999999999999999999999843
No 173
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=52.29 E-value=15 Score=30.61 Aligned_cols=26 Identities=19% Similarity=0.093 Sum_probs=12.6
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 15 GKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 15 A~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
|..++..|++++|++++.++++++|.
T Consensus 98 a~~~~~~~~~~~A~~~~~~~~~~~~~ 123 (243)
T 2q7f_A 98 GNVYVVKEMYKEAKDMFEKALRAGME 123 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 33344445555555555555555543
No 174
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=51.58 E-value=17 Score=32.84 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+..++.+|..++..|++++|+.++.+|+++.|..
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~ 42 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTED 42 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccc
Confidence 45567889999999999999999999999999984
No 175
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=51.12 E-value=6.2 Score=33.66 Aligned_cols=17 Identities=29% Similarity=0.346 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhhCCC
Q 018317 24 RARAIKFLSKARRLDPS 40 (358)
Q Consensus 24 ~~~A~kf~~kA~~L~Pt 40 (358)
+++|+..+++|++|+|.
T Consensus 62 ~~eAi~~le~AL~ldP~ 78 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPK 78 (158)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 56999999999999999
No 176
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=51.09 E-value=19 Score=26.98 Aligned_cols=33 Identities=3% Similarity=-0.072 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
.+.|...+..|...-.+|++++|+.++..|+.+
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 478888888888888999999999988887765
No 177
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=50.85 E-value=15 Score=32.94 Aligned_cols=31 Identities=29% Similarity=0.434 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
++.+|..++..|++++|+.++.++++++|..
T Consensus 67 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 97 (368)
T 1fch_A 67 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH 97 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 6677888888888888888888888888873
No 178
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=50.49 E-value=13 Score=36.60 Aligned_cols=30 Identities=10% Similarity=0.213 Sum_probs=21.8
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
..+|..++..|++++|++.+++|++++|..
T Consensus 78 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~ 107 (477)
T 1wao_1 78 YRRAASNMALGKFRAALRDYETVVKVKPHD 107 (477)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 344556677788888888888888888764
No 179
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=48.62 E-value=16 Score=32.83 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.-.+.+|..++..|++++|+..+.++++++|..
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 346677888889999999999999999999985
No 180
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=48.53 E-value=20 Score=34.15 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.-+..+|..++..|++++|++.+.++++++|..
T Consensus 60 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 92 (537)
T 3fp2_A 60 VFYSNISACYISTGDLEKVIEFTTKALEIKPDH 92 (537)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCch
Confidence 346677888899999999999999999999984
No 181
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=48.19 E-value=58 Score=23.39 Aligned_cols=47 Identities=17% Similarity=0.277 Sum_probs=35.0
Q ss_pred CCCCCCHHHHHHHHHh-hc-cCChhhhh---CcCCCCCHHHHHHHHHHHHHh
Q 018317 92 TSPAYTEEQIAIVRQI-KK-TKDFYEIL---GVERSCTVEDVRKSYRKLSLK 138 (358)
Q Consensus 92 ~~~~~t~e~~~~~~~~-~~-~~d~Y~iL---gv~~~a~~~eIkkayrklal~ 138 (358)
....||+|+.+.+..- .+ ...|=.|| -.-++-+.-+||..||.|.+.
T Consensus 7 ~r~~WT~EE~~~L~~gV~k~G~~W~~I~~~y~f~~~RT~VdLKdk~r~L~k~ 58 (62)
T 1x58_A 7 GRKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYHRLISG 58 (62)
T ss_dssp CSSSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHhHhHHHHHHhCCCccCcccchHHHHHHHHHhc
Confidence 4568999998777643 22 34888888 466677899999999998753
No 182
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=48.09 E-value=27 Score=32.81 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=24.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
...+|..++..|++++|+..+.++++++|..
T Consensus 42 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 72 (514)
T 2gw1_A 42 YSNLSACYVSVGDLKKVVEMSTKALELKPDY 72 (514)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCSCC
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHhccChHH
Confidence 4456677778888888888888888888873
No 183
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=47.65 E-value=16 Score=32.97 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=26.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|+..+.+|++++|..
T Consensus 102 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 132 (365)
T 4eqf_A 102 WQFLGITQAENENEQAAIVALQRCLELQPNN 132 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC
Confidence 4556667788899999999999999999983
No 184
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=47.47 E-value=16 Score=35.48 Aligned_cols=35 Identities=17% Similarity=0.112 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+.-+..+|..++..|++++|+..+.+|++++|..
T Consensus 257 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 291 (474)
T 4abn_A 257 NPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW 291 (474)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 34456677777888899999999999999999984
No 185
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=46.82 E-value=21 Score=34.92 Aligned_cols=35 Identities=17% Similarity=0.041 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+.-+..+|..++..|++++|+..+.+|++++|..
T Consensus 39 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 73 (477)
T 1wao_1 39 NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY 73 (477)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 45567889999999999999999999999999984
No 186
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=46.75 E-value=15 Score=33.58 Aligned_cols=31 Identities=29% Similarity=0.408 Sum_probs=22.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..++..++..|++++|+..+.+|++++|..
T Consensus 70 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 100 (388)
T 1w3b_A 70 YSNLGNVYKERGQLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcCcch
Confidence 4455666677788888888888888888773
No 187
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=46.74 E-value=16 Score=32.67 Aligned_cols=34 Identities=15% Similarity=0.048 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
|.-+..++..+...|++++|+..+.+|+.++|..
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~ 110 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR 110 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 3444556666778899999999999999999865
No 188
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.55 E-value=26 Score=28.43 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARR 36 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~ 36 (358)
-++|.+||..|.+.=+.|+.+.|+.+|.+.+.
T Consensus 19 h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDELGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 36899999999999999999999888877653
No 189
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=46.18 E-value=20 Score=31.25 Aligned_cols=31 Identities=19% Similarity=0.169 Sum_probs=26.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|+..+.++++++|..
T Consensus 239 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 269 (330)
T 3hym_B 239 LNNLGHVCRKLKKYAEALDYHRQALVLIPQN 269 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhCccc
Confidence 3455666778899999999999999999984
No 190
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=45.83 E-value=18 Score=32.37 Aligned_cols=31 Identities=23% Similarity=0.248 Sum_probs=26.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|+..+.+|++++|..
T Consensus 101 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 131 (368)
T 1fch_A 101 WQYLGTTQAENEQELLAISALRRCLELKPDN 131 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHhcCCCC
Confidence 4455667888999999999999999999973
No 191
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=45.22 E-value=20 Score=31.30 Aligned_cols=34 Identities=24% Similarity=0.079 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.-+..+|..++..|++++|++.+.++++++|..
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 205 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDD 205 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc
Confidence 3446667777778888888888888888888863
No 192
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=43.61 E-value=37 Score=30.55 Aligned_cols=30 Identities=20% Similarity=-0.028 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
..++..+++.|++++|++.+.++++++|..
T Consensus 134 ~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~ 163 (291)
T 3mkr_A 134 AMTVQILLKLDRLDLARKELKKMQDQDEDA 163 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcCc
Confidence 345677888899999999999999999874
No 193
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=43.31 E-value=18 Score=37.92 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=24.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
...+|..+...|++++|+..+++|++++|..
T Consensus 114 ~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~ 144 (723)
T 4gyw_A 114 HSNLASIHKDSGNIPEAIASYRTALKLKPDF 144 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 3445556778899999999999999999984
No 194
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=42.86 E-value=15 Score=36.21 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=17.3
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
..+|..++..|++++|++.+++|++++|.
T Consensus 61 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 89 (568)
T 2vsy_A 61 ARLGRVRWTQQRHAEAAVLLQQASDAAPE 89 (568)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 34444555666666666666666666665
No 195
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=42.50 E-value=13 Score=33.99 Aligned_cols=28 Identities=18% Similarity=0.332 Sum_probs=17.8
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 13 KIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 13 ~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
++|..++..|++++|++.+.++++++|.
T Consensus 4 ~~a~~~~~~g~~~~A~~~~~~~~~~~p~ 31 (388)
T 1w3b_A 4 ELAHREYQAGDFEAAERHCMQLWRQEPD 31 (388)
T ss_dssp THHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHCCCHHHHHHHHHHHHHhCCC
Confidence 3455666666666666666666666665
No 196
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=41.92 E-value=39 Score=30.05 Aligned_cols=31 Identities=16% Similarity=0.022 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
..+|..++..|++++|+..+.+|+++.|...
T Consensus 162 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 162 IKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 4456666778999999999999999998753
No 197
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=41.83 E-value=22 Score=35.03 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=26.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..+|..++..|++++|+..+++|++++|..
T Consensus 94 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 94 ALWLGHALEDAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4456667788899999999999999999984
No 198
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=41.69 E-value=32 Score=31.39 Aligned_cols=37 Identities=22% Similarity=0.468 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHH
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVD 44 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~ 44 (358)
+.-+..+|..+...|++++|+.++.+|+++++.....
T Consensus 343 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 379 (411)
T 4a1s_A 343 ARACWSLGNAHSAIGGHERALKYAEQHLQLAXXXXXX 379 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhcccc
Confidence 3345556777888999999999999999999986543
No 199
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=41.36 E-value=25 Score=31.55 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=16.9
Q ss_pred cCCHHHHHHHHHHHHhhCCC
Q 018317 21 SGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 21 ~gd~~~A~kf~~kA~~L~Pt 40 (358)
.|++++|++.+++|++++|.
T Consensus 182 ~~~~~~A~~~~~~al~~~p~ 201 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKYGD 201 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHhCCC
Confidence 58888888888888888887
No 200
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=41.03 E-value=28 Score=33.75 Aligned_cols=31 Identities=19% Similarity=-0.005 Sum_probs=21.5
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCCCCHHHHHH
Q 018317 18 ALESGDRARAIKFLSKARRLDPSLPVDDIIS 48 (358)
Q Consensus 18 ~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~ 48 (358)
+...|++++|+..+.+|++|+|..+.-.++.
T Consensus 320 ~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~ 350 (372)
T 3ly7_A 320 YEMKGMNREAADAYLTAFNLRPGANTLYWIE 350 (372)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSCSHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCcChHHHHh
Confidence 3467888888888888888888765443443
No 201
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=40.80 E-value=31 Score=29.07 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
.+.+.-+..+|..++..|++++|+..+.+|+++
T Consensus 124 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 124 PDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555667777888899999999999999999
No 202
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=40.73 E-value=17 Score=28.10 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHh
Q 018317 5 KDDALKCFKIGKEALES---GDRARAIKFLSKARR 36 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~---gd~~~A~kf~~kA~~ 36 (358)
.+.|.+||..|.++=+. |+.+.|+.+|.|.+.
T Consensus 13 h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~ 47 (89)
T 3eab_A 13 HKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIE 47 (89)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHH
Confidence 36899999999998888 999999999998753
No 203
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=40.64 E-value=26 Score=28.25 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=20.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
..+|..++..|++++|++.+.+|+++.....
T Consensus 151 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 181 (203)
T 3gw4_A 151 RGLGDLAQQEKNLLEAQQHWLRARDIFAELE 181 (203)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 3445556666777777777777777766543
No 204
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=40.08 E-value=32 Score=30.83 Aligned_cols=28 Identities=14% Similarity=0.038 Sum_probs=13.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
-+..+|..++..|++++|+..+.+|+++
T Consensus 157 ~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 157 LIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444
No 205
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=39.99 E-value=38 Score=26.64 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKAR 35 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~ 35 (358)
.|..-+.-|+.+|..+++..|.+++++|.
T Consensus 33 ~A~dKl~~A~~Am~~~~y~~Ar~lAEqAe 61 (98)
T 4fm3_A 33 LAQDKYAAAQIAMTAESYKKARLLAEQAE 61 (98)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 56778889999999999999999999985
No 206
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=38.83 E-value=25 Score=32.51 Aligned_cols=31 Identities=10% Similarity=0.006 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-++.|+++++.||+++|++.+.++++++|..
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~ 37 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQ 37 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCccc
Confidence 5778999999999999999999999999974
No 207
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=38.65 E-value=25 Score=31.58 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDP 39 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~P 39 (358)
.|.-+..+|..+.. |++++|+..+.+|+.++|
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~ 146 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFE 146 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHH
Confidence 45566788888888 999999999999999875
No 208
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=38.33 E-value=24 Score=33.28 Aligned_cols=23 Identities=13% Similarity=0.091 Sum_probs=20.1
Q ss_pred cCCHHHHHHHHHHHHhhCCCCCH
Q 018317 21 SGDRARAIKFLSKARRLDPSLPV 43 (358)
Q Consensus 21 ~gd~~~A~kf~~kA~~L~Pt~~~ 43 (358)
-||.++|.+.++||++|.|.-.+
T Consensus 217 gGd~ekA~~~ferAL~LnP~~~i 239 (301)
T 3u64_A 217 GGGMEKAHTAFEHLTRYCSAHDP 239 (301)
T ss_dssp TCCHHHHHHHHHHHHHHCCTTCS
T ss_pred CCCHHHHHHHHHHHHHhCCCCCc
Confidence 49999999999999999996433
No 209
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=37.67 E-value=32 Score=29.68 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
..+.-+..++..++..|++++|+.++.+|++.
T Consensus 4 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~ 35 (273)
T 1ouv_A 4 QDPKELVGLGAKSYKEKDFTQAKKYFEKACDL 35 (273)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHhCCCHHHHHHHHHHHHHC
Confidence 44556788888888999999999999999883
No 210
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=37.51 E-value=42 Score=28.81 Aligned_cols=34 Identities=9% Similarity=-0.055 Sum_probs=30.3
Q ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 4 NKDDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 4 NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
+.+.+.-+..+|..++..|++++|+.++.+++++
T Consensus 23 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 56 (311)
T 3nf1_A 23 IPARLRTLHNLVIQYASQGRYEVAVPLCKQALED 56 (311)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3456777889999999999999999999999998
No 211
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=37.21 E-value=40 Score=31.69 Aligned_cols=25 Identities=12% Similarity=-0.021 Sum_probs=21.1
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhCC
Q 018317 15 GKEALESGDRARAIKFLSKARRLDP 39 (358)
Q Consensus 15 A~~~~~~gd~~~A~kf~~kA~~L~P 39 (358)
+..+++.|+.+.|++.+.+.++++|
T Consensus 143 vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 143 IEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 3457888999999999999999988
No 212
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=37.15 E-value=47 Score=26.63 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
.+.-+..+|..++..|++++|++.+.+|+++
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4444566777788899999999999999999
No 213
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=37.00 E-value=48 Score=27.77 Aligned_cols=34 Identities=12% Similarity=-0.020 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLD 38 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~ 38 (358)
...+.-+..+|..++..|++++|+..+.+|+++.
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 115 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIR 115 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 3445556777888888999999999999999994
No 214
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=36.81 E-value=27 Score=28.82 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=25.9
Q ss_pred CChHHHHHHHHHHHH-------HHhcCCHHHHHHHHHHHHhh
Q 018317 3 GNKDDALKCFKIGKE-------ALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~-------~~~~gd~~~A~kf~~kA~~L 37 (358)
+|++||.+|++.|+. .+..|+++-|.=.+..|.++
T Consensus 4 ~~~ee~~~wl~~A~~dl~~A~~~~~~g~y~~a~F~aqQA~Ek 45 (141)
T 3o10_A 4 GNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYLSTKL 45 (141)
T ss_dssp CCHHHHHHHHHHHHHHHHHHGGGTTTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhhhHHhhHHhhCccceEeeehhHHHHH
Confidence 589999999999875 45568887776666666544
No 215
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=36.72 E-value=76 Score=23.17 Aligned_cols=50 Identities=24% Similarity=0.288 Sum_probs=31.4
Q ss_pred CCCCCCHHHHHHHHHhhc-----cCChhhhhCcCCCCCHHHHHHHHHHHHHhhCC
Q 018317 92 TSPAYTEEQIAIVRQIKK-----TKDFYEILGVERSCTVEDVRKSYRKLSLKVHP 141 (358)
Q Consensus 92 ~~~~~t~e~~~~~~~~~~-----~~d~Y~iLgv~~~a~~~eIkkayrklal~~HP 141 (358)
....||.++..++.+... ..+-++...--.+-+..+|++.|+.|......
T Consensus 7 ~~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~lgRt~~eV~~~y~~L~~d~~~ 61 (72)
T 2cqq_A 7 GAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAKQLKDSVTC 61 (72)
T ss_dssp CCCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHTSCHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHhCCCHHHHHHHHHHHHHhcCc
Confidence 345799999888776543 23434422211146888999999888666443
No 216
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=36.60 E-value=17 Score=37.38 Aligned_cols=32 Identities=19% Similarity=0.028 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-++.+|..++..|++++|+..+.+|++++|..
T Consensus 435 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~ 466 (681)
T 2pzi_A 435 LPLMEVRALLDLGDVAKATRKLDDLAERVGWR 466 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhccCcch
Confidence 35555667888999999999999999999984
No 217
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=36.30 E-value=31 Score=29.69 Aligned_cols=36 Identities=11% Similarity=-0.006 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
...+.-+..+|..++..|++++|++++.+++++.|.
T Consensus 192 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 192 PNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 344555667777888899999999999999987654
No 218
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=36.19 E-value=45 Score=32.23 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
..+.-+..++..+.+.|++++|++.+.++++++|..
T Consensus 198 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~ 233 (597)
T 2xpi_A 198 LEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAKC 233 (597)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCchh
Confidence 456678889999999999999999999999999973
No 219
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=36.15 E-value=30 Score=32.38 Aligned_cols=31 Identities=6% Similarity=-0.083 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
..+|..+...|++++|+..+.||+.+.|...
T Consensus 338 ~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 338 SILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 3566778889999999999999999999854
No 220
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=36.00 E-value=30 Score=30.65 Aligned_cols=33 Identities=9% Similarity=0.052 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 9 LKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 9 ~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.-+..+|..++..|++++|+.++.+|+++.+..
T Consensus 197 ~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 345566777888999999999999999987653
No 221
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=35.83 E-value=31 Score=32.92 Aligned_cols=26 Identities=4% Similarity=0.022 Sum_probs=16.8
Q ss_pred HHHHHhcCC-HHHHHHHHHHHHhhCCC
Q 018317 15 GKEALESGD-RARAIKFLSKARRLDPS 40 (358)
Q Consensus 15 A~~~~~~gd-~~~A~kf~~kA~~L~Pt 40 (358)
+..++..|+ +++|+.++.+|++++|.
T Consensus 138 g~~l~~~g~d~~eAl~~~~~al~l~P~ 164 (382)
T 2h6f_A 138 RVLLKSLQKDLHEEMNYITAIIEEQPK 164 (382)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHCCC
Confidence 334455564 77777777777777776
No 222
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=35.57 E-value=46 Score=30.48 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=18.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..+|..++..|++++|+.++.+|+.+.+.
T Consensus 264 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 264 LFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 344455556666666666666666666554
No 223
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=34.19 E-value=61 Score=25.66 Aligned_cols=34 Identities=26% Similarity=0.161 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLD 38 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~ 38 (358)
-.+|.-|.--|.++.+.|||++|...+.+|..-.
T Consensus 17 aG~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~l 50 (105)
T 2e2a_A 17 AGDARSKLLEALKAAENGDFAKADSLVVEAGSCI 50 (105)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3567778888888999999999999999987643
No 224
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=34.15 E-value=74 Score=26.71 Aligned_cols=36 Identities=11% Similarity=0.070 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCCCCH
Q 018317 8 ALKCFKIGKEALE----SGDRARAIKFLSKARRLDPSLPV 43 (358)
Q Consensus 8 A~rc~~iA~~~~~----~gd~~~A~kf~~kA~~L~Pt~~~ 43 (358)
+.-+..++..++. .+|+++|++++++|.++.+...+
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~a 164 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYA 164 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSCTTHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCCHHH
Confidence 4446666666776 77888888888888888333333
No 225
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=33.92 E-value=52 Score=25.92 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=25.3
Q ss_pred CChHHHHHHHHHH-------------HHHHh----cCCHHHHHHHHHHHHhhCC
Q 018317 3 GNKDDALKCFKIG-------------KEALE----SGDRARAIKFLSKARRLDP 39 (358)
Q Consensus 3 ~NkdeA~rc~~iA-------------~~~~~----~gd~~~A~kf~~kA~~L~P 39 (358)
.|.++|.++++.| ..+.. .+|+++|++++.+|.++..
T Consensus 75 ~d~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 75 KDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCC
Confidence 4555666555544 34555 6888999999999888744
No 226
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=33.85 E-value=62 Score=25.50 Aligned_cols=34 Identities=18% Similarity=0.094 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLD 38 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~ 38 (358)
=.+|.-|.--|.++.+.|||++|...+.+|..-.
T Consensus 15 aG~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~l 48 (103)
T 1wcr_A 15 SGQARSLAYAALKQAKQGDFAAAKAMMDQSRMAL 48 (103)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3577778888888999999999999999987643
No 227
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=33.77 E-value=43 Score=31.83 Aligned_cols=37 Identities=14% Similarity=-0.043 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-+.+.-...++..+...|++++|+..+.+|++++|..
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~ 130 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAAN 130 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC
Confidence 3445556777777888999999999999999999983
No 228
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=32.89 E-value=38 Score=31.06 Aligned_cols=36 Identities=11% Similarity=0.057 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
.|.-+..+|..+...|++++|+.++.+|+.+++...
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 177 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHE 177 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCc
Confidence 555666777788888999999999999999988754
No 229
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=32.67 E-value=66 Score=25.65 Aligned_cols=34 Identities=18% Similarity=0.049 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLD 38 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~ 38 (358)
-.+|.-|.--|.++.+.|||++|.+.+.+|..-.
T Consensus 19 aG~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~l 52 (109)
T 3k1s_A 19 SGNARSFAMEALQFAKQGKMAEADEAMVKAKEAI 52 (109)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3577778888888899999999999999986543
No 230
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=32.28 E-value=40 Score=28.99 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-...+|..++..|++++|+..+.+|+++.|..
T Consensus 85 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 85 ASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 34455666778899999999999999998864
No 231
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=32.24 E-value=39 Score=30.96 Aligned_cols=35 Identities=14% Similarity=0.027 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLP 42 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~ 42 (358)
|.-...+|..++..|++++|+..+.+|+++.|...
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 218 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK 218 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 33344556667788999999999999999988654
No 232
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=32.18 E-value=89 Score=24.31 Aligned_cols=41 Identities=24% Similarity=0.347 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHH
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDII 47 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll 47 (358)
.|.-.|.-|+..++.+|+-.|+-+++|+..+-..+.++.+.
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~ 92 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIA 92 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHH
Confidence 56667888889999999999999999999998876665543
No 233
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=31.72 E-value=42 Score=31.58 Aligned_cols=39 Identities=23% Similarity=0.234 Sum_probs=33.1
Q ss_pred CCChHHHHHHHHHHHHHH----------------h-cCCHHHHHHHHHHHHhhCCC
Q 018317 2 DGNKDDALKCFKIGKEAL----------------E-SGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 2 e~NkdeA~rc~~iA~~~~----------------~-~gd~~~A~kf~~kA~~L~Pt 40 (358)
-|+.+.|+++++.|.+.= . .||.+.|++.+++|+++.|.
T Consensus 217 gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 217 GGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp TCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred CCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 478999999999887532 1 37899999999999999998
No 234
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=31.60 E-value=69 Score=26.03 Aligned_cols=33 Identities=15% Similarity=0.007 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLD 38 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~ 38 (358)
.+|.-|.--|.++.+.|||++|.+.+.+|..-.
T Consensus 35 G~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~l 67 (120)
T 3l8r_A 35 GNARSIVHEAFDAMREKNYILAEQKLQEANDEL 67 (120)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 467777778888889999999999999986543
No 235
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=30.38 E-value=38 Score=31.65 Aligned_cols=29 Identities=24% Similarity=0.217 Sum_probs=25.2
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 13 KIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 13 ~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.+|..+...|++++|+..+.+|++++|..
T Consensus 252 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 280 (472)
T 4g1t_A 252 SAAKFYRRKDEPDKAIELLKKALEYIPNN 280 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHhCCCh
Confidence 45667788999999999999999999984
No 236
>3dza_A Uncharacterized putative membrane protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=30.01 E-value=60 Score=28.55 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.|.+=|..|+-+|-.|+.+.|++++..|..+.-.-
T Consensus 34 ~A~~DI~~AR~aL~~G~~~~Ak~lL~~A~~~L~~a 68 (191)
T 3dza_A 34 NAMRDIQFARLALFHGQPDSAKKLTDDAAALLAAD 68 (191)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 68888999999999999999999999999887763
No 237
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=29.63 E-value=47 Score=29.33 Aligned_cols=31 Identities=10% Similarity=0.048 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
-...+|..++..|++++|+.++.+|+.+.+.
T Consensus 198 ~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 3455666788899999999999999999754
No 238
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=28.76 E-value=68 Score=27.47 Aligned_cols=26 Identities=23% Similarity=0.178 Sum_probs=19.6
Q ss_pred HHHHHHh----cCCHHHHHHHHHHHHhhCC
Q 018317 14 IGKEALE----SGDRARAIKFLSKARRLDP 39 (358)
Q Consensus 14 iA~~~~~----~gd~~~A~kf~~kA~~L~P 39 (358)
++..++. .+|+++|+.++.+|+++.|
T Consensus 188 lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~ 217 (273)
T 1ouv_A 188 AGNMYHHGEGATKNFKEALARYSKACELEN 217 (273)
T ss_dssp HHHHHHHTCSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCccHHHHHHHHHHHHhCCC
Confidence 3445566 7888888888888888876
No 239
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=28.73 E-value=37 Score=32.89 Aligned_cols=37 Identities=14% Similarity=0.133 Sum_probs=26.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhh
Q 018317 14 IGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSI 50 (358)
Q Consensus 14 iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~ 50 (358)
.|..++..|+++.|+..+++|+.|+|+.-+..++..+
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~ 319 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKV 319 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 3445566799999999999999999873222344444
No 240
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=28.28 E-value=69 Score=28.17 Aligned_cols=36 Identities=0% Similarity=-0.218 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 6 DDALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 6 deA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+.....+..+..++..|++++|+.++.+++...|..
T Consensus 73 ~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~ 108 (293)
T 2qfc_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYH 108 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCC
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCC
Confidence 345566788889999999999999999999998874
No 241
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=28.12 E-value=59 Score=27.34 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLD 38 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~ 38 (358)
.+.-+..++..++..+|+++|++++.+|..+.
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g 48 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG 48 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC
Confidence 34558888888999999999999999999874
No 242
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=28.01 E-value=48 Score=29.54 Aligned_cols=30 Identities=3% Similarity=-0.032 Sum_probs=23.6
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 12 FKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
+..|.-....|++++|++.+++|+++.|..
T Consensus 103 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (308)
T 2ond_A 103 FAYADYEESRMKYEKVHSIYNRLLAIEDID 132 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSSSSC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhccccC
Confidence 333444456799999999999999999974
No 243
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=27.96 E-value=75 Score=24.93 Aligned_cols=28 Identities=29% Similarity=0.313 Sum_probs=22.7
Q ss_pred HHHHHHHHHHh----cCCHHHHHHHHHHHHhh
Q 018317 10 KCFKIGKEALE----SGDRARAIKFLSKARRL 37 (358)
Q Consensus 10 rc~~iA~~~~~----~gd~~~A~kf~~kA~~L 37 (358)
-|..++..++. .+|+++|+++++||.++
T Consensus 59 a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 59 GCRFLGDFYENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC
Confidence 35666666777 78999999999999887
No 244
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=27.50 E-value=48 Score=29.78 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-...+|..++..|++++|+.++.+|+.++|..
T Consensus 89 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 89 ASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 34456667778899999999999999998864
No 245
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=27.00 E-value=62 Score=29.92 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=24.2
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHH
Q 018317 16 KEALESGDRARAIKFLSKARRLDPSLPVDDIIS 48 (358)
Q Consensus 16 ~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~ 48 (358)
....+.|+.++|+..+++++.++|...+...|.
T Consensus 216 laL~~lGr~deA~~~l~~a~a~~P~~~~~~aL~ 248 (282)
T 4f3v_A 216 MARRSQGNESAAVALLEWLQTTHPEPKVAAALK 248 (282)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCcHHHHHHHh
Confidence 344566899999999999999999822444443
No 246
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=26.20 E-value=60 Score=32.07 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+-++-+.+..|..+++.||++.|.+.+..|.++-=.
T Consensus 379 ~~~~a~~~~~a~~~~~~gd~~~A~~~L~~A~~~~~~ 414 (464)
T 4fx5_A 379 QAEMAAAIQEGLDAQAAGDLDTATARLGRAMDLAVE 414 (464)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 456778889999999999999999999999998543
No 247
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=26.20 E-value=57 Score=29.85 Aligned_cols=35 Identities=11% Similarity=0.063 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
.|.-+..+|..++..|+++.|+.++.+|+.+++..
T Consensus 140 ~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 174 (378)
T 3q15_A 140 KAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNH 174 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC
Confidence 34445556667788899999999999999998864
No 248
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=25.13 E-value=87 Score=23.40 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=28.0
Q ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 018317 3 GNKDDALKCFKIGKEALESGDRARAIKFLSKARRL 37 (358)
Q Consensus 3 ~NkdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L 37 (358)
.+-.+=..-+.+|+++-..||++.|+.++..++..
T Consensus 7 ~~~~~i~e~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 7 MSLQMIVENVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp SSSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 34455556688999988899999999999988763
No 249
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=23.72 E-value=1.1e+02 Score=24.59 Aligned_cols=42 Identities=21% Similarity=0.129 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCHHHHHHhh
Q 018317 5 KDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSI 50 (358)
Q Consensus 5 kdeA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~~~~ll~~~ 50 (358)
.|.|++-++.|+..++.|+++-|.-.+..|.+.. ++++|...
T Consensus 13 ~~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~Eka----lKAlL~~~ 54 (135)
T 1o3u_A 13 MDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKA----VKAVFQRM 54 (135)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHH----HHHHHHHc
Confidence 3899999999999999999999999998888764 44555544
No 250
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=23.71 E-value=84 Score=26.12 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLD 38 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~ 38 (358)
-|..++..|..+...||.+.|--++.++..|.
T Consensus 39 ta~~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 39 SGVEIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999987664
No 251
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=23.57 E-value=60 Score=31.41 Aligned_cols=30 Identities=13% Similarity=-0.018 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
-|+.++. ..+.|++++|++.+++|++++|.
T Consensus 15 ~w~~l~~-~~~~~~~~~a~~~~e~al~~~P~ 44 (530)
T 2ooe_A 15 AWSILIR-EAQNQPIDKARKTYERLVAQFPS 44 (530)
T ss_dssp HHHHHHH-HHHSSCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHH-HHHhCCHHHHHHHHHHHHHHCCC
Confidence 3555555 35566677777777777776666
No 252
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=23.41 E-value=98 Score=31.96 Aligned_cols=43 Identities=7% Similarity=0.195 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC-HHHHHHhh
Q 018317 8 ALKCFKIGKEALESGDRARAIKFLSKARRLDPSLP-VDDIISSI 50 (358)
Q Consensus 8 A~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~~-~~~ll~~~ 50 (358)
+.+.++.|++++..||+.=|..++..++..+|... +++|++.+
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~ 492 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADA 492 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 45678899999999999999999999999999853 56665544
No 253
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=23.31 E-value=1.1e+02 Score=23.53 Aligned_cols=46 Identities=13% Similarity=0.198 Sum_probs=29.0
Q ss_pred CCCCCCHHHHHHHHHhhcc------CChhhhhCcCCCCCHHHHHHHHHHHHH
Q 018317 92 TSPAYTEEQIAIVRQIKKT------KDFYEILGVERSCTVEDVRKSYRKLSL 137 (358)
Q Consensus 92 ~~~~~t~e~~~~~~~~~~~------~d~Y~iLgv~~~a~~~eIkkayrklal 137 (358)
+...||.++..++...... ..|-.|=..=++-|..+|+..|..|..
T Consensus 7 ~~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~l~~ 58 (93)
T 2cjj_A 7 SGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVE 58 (93)
T ss_dssp -CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3558999998887654331 224444333346788888888888753
No 254
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=23.28 E-value=80 Score=31.33 Aligned_cols=34 Identities=9% Similarity=-0.006 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 7 DALKCFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 7 eA~rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+|...++.|.++...|++++|+.++++|+.+.-.
T Consensus 308 ~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~ 341 (490)
T 3n71_A 308 FSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEP 341 (490)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 4666778888888999999999999999987543
No 255
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=23.11 E-value=86 Score=30.14 Aligned_cols=30 Identities=17% Similarity=0.091 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDPS 40 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt 40 (358)
+..++..+...|++++|++.++++++++|.
T Consensus 519 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 548 (597)
T 2xpi_A 519 WANLGHAYRKLKMYDAAIDALNQGLLLSTN 548 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 444556667889999999999999999997
No 256
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=22.57 E-value=87 Score=24.42 Aligned_cols=24 Identities=25% Similarity=0.245 Sum_probs=17.2
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHH
Q 018317 12 FKIGKEALESGDRARAIKFLSKAR 35 (358)
Q Consensus 12 ~~iA~~~~~~gd~~~A~kf~~kA~ 35 (358)
-..|+..+..|.|+.|+....||.
T Consensus 19 ~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 19 SRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHH
Confidence 456778888888888876555543
No 257
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=22.45 E-value=3.1e+02 Score=22.10 Aligned_cols=77 Identities=12% Similarity=0.261 Sum_probs=54.2
Q ss_pred CCCCCHHHHHHHHHhhc---cCChhhhhCcC----CCCCHHHHHHHHHHHHH--hhCCCCCCC-CChHHHHHHHHHHHHH
Q 018317 93 SPAYTEEQIAIVRQIKK---TKDFYEILGVE----RSCTVEDVRKSYRKLSL--KVHPDKNKA-PGAEEAFKAVSKAFQC 162 (358)
Q Consensus 93 ~~~~t~e~~~~~~~~~~---~~d~Y~iLgv~----~~a~~~eIkkayrklal--~~HPDk~~~-~~a~~~fk~i~~Ay~v 162 (358)
...||.|+.+++...-. ...|=.|+... ++=|..+||-.||.+.. ...|+.... +-.++.-..|.+|...
T Consensus 17 r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~~~~~p~~krg~~~p~e~~~rv~~~h~~ 96 (121)
T 2juh_A 17 RRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQDLLDRVLAAHAY 96 (121)
T ss_dssp SCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSCCSSCCSHHHHHHHHHHHHHHHTCSTTCCCSCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccccCCCCHHHHHHHHHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHH
Confidence 45899998877764322 34676676543 56788999999999876 345776654 4456666778899998
Q ss_pred cCChhhh
Q 018317 163 LSNDESR 169 (358)
Q Consensus 163 Lsd~~kR 169 (358)
+++...+
T Consensus 97 ~gn~~~~ 103 (121)
T 2juh_A 97 WSQQQGK 103 (121)
T ss_dssp HHHHHCC
T ss_pred Hccchhc
Confidence 8876655
No 258
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=21.20 E-value=1.6e+02 Score=23.02 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=31.9
Q ss_pred ChHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHhhCCC
Q 018317 4 NKDDALKCFKIGKEALESGD--RARAIKFLSKARRLDPS 40 (358)
Q Consensus 4 NkdeA~rc~~iA~~~~~~gd--~~~A~kf~~kA~~L~Pt 40 (358)
+.++|..-|+-....|.+|+ ++.+++.++++.+|--.
T Consensus 31 sFEeal~eLEeIV~~LE~gel~LEesl~lyeeG~~L~k~ 69 (100)
T 1vp7_A 31 DFETALAELESLVSAMENGTLPLEQSLSAYRRGVELARV 69 (100)
T ss_dssp SHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 57899999999999999995 89999999999888654
No 259
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=20.93 E-value=1.2e+02 Score=20.94 Aligned_cols=41 Identities=27% Similarity=0.307 Sum_probs=30.9
Q ss_pred HHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHcCChhhhhhhc
Q 018317 129 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYD 173 (358)
Q Consensus 129 kkayrklal~~HPDk~~~~~a~~~fk~i~~Ay~vLsd~~kR~~YD 173 (358)
.+.+|.....-||+.. ..+..+.|.+.|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH----NAELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHTTCTTSC----HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4556666777788754 5788999999999999887665444
No 260
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=20.76 E-value=1.1e+02 Score=26.81 Aligned_cols=29 Identities=14% Similarity=0.064 Sum_probs=23.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 018317 11 CFKIGKEALESGDRARAIKFLSKARRLDP 39 (358)
Q Consensus 11 c~~iA~~~~~~gd~~~A~kf~~kA~~L~P 39 (358)
...++..+...|++++|+.++.+|+++..
T Consensus 158 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 186 (293)
T 3u3w_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLE 186 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 45566668888999999999999997654
No 261
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=20.09 E-value=84 Score=30.35 Aligned_cols=32 Identities=3% Similarity=-0.075 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 018317 10 KCFKIGKEALESGDRARAIKFLSKARRLDPSL 41 (358)
Q Consensus 10 rc~~iA~~~~~~gd~~~A~kf~~kA~~L~Pt~ 41 (358)
-|+..+.-.++.|++++|++.+.+|++++|..
T Consensus 48 ~w~~~~~~~~~~~~~~~a~~~~~ral~~~p~~ 79 (530)
T 2ooe_A 48 FWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHI 79 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTCCCH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCh
Confidence 36666777788899999999999999999963
Done!