Query 018318
Match_columns 358
No_of_seqs 157 out of 1778
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 07:59:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018318.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018318hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0112 GlyA Glycine/serine hy 100.0 3.1E-59 6.7E-64 419.2 32.7 325 10-358 5-329 (413)
2 KOG2467 Glycine/serine hydroxy 100.0 6.2E-59 1.3E-63 410.4 30.7 353 4-358 13-366 (477)
3 PLN02271 serine hydroxymethylt 100.0 2.2E-57 4.8E-62 431.3 35.0 355 3-358 120-480 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 2.1E-56 4.5E-61 415.5 25.6 345 12-358 1-345 (399)
5 PLN03226 serine hydroxymethylt 100.0 4.2E-48 9E-53 373.6 33.7 352 4-357 7-358 (475)
6 PRK13580 serine hydroxymethylt 100.0 7.5E-48 1.6E-52 365.5 30.8 321 10-356 28-382 (493)
7 PTZ00094 serine hydroxymethylt 100.0 6.5E-43 1.4E-47 338.5 34.5 335 9-356 12-346 (452)
8 PRK13034 serine hydroxymethylt 100.0 3.2E-41 7E-46 322.9 34.1 325 7-355 4-328 (416)
9 PRK00011 glyA serine hydroxyme 100.0 8.4E-39 1.8E-43 307.8 35.3 321 10-354 4-324 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 1.4E-38 2.9E-43 305.1 35.8 321 14-356 2-322 (402)
11 COG0520 csdA Selenocysteine ly 100.0 4.3E-29 9.2E-34 236.4 24.8 286 35-340 26-328 (405)
12 COG1168 MalY Bifunctional PLP- 100.0 1.2E-28 2.5E-33 221.5 25.1 287 32-357 26-333 (388)
13 COG0075 Serine-pyruvate aminot 100.0 2.5E-28 5.4E-33 225.2 23.6 296 33-357 6-310 (383)
14 COG1104 NifS Cysteine sulfinat 100.0 1.2E-28 2.6E-33 225.6 20.7 267 36-338 6-287 (386)
15 PLN02409 serine--glyoxylate am 99.9 2.3E-25 5E-30 213.1 25.9 278 32-338 9-298 (401)
16 PRK02769 histidine decarboxyla 99.9 1.4E-24 3.1E-29 204.7 29.4 272 43-340 34-319 (380)
17 COG0399 WecE Predicted pyridox 99.9 3.7E-25 8.1E-30 204.5 22.9 264 43-352 13-293 (374)
18 PLN02651 cysteine desulfurase 99.9 2.7E-25 5.8E-30 210.3 21.5 267 37-339 5-287 (364)
19 PF00266 Aminotran_5: Aminotra 99.9 6E-25 1.3E-29 208.5 23.6 284 36-338 4-301 (371)
20 cd06451 AGAT_like Alanine-glyo 99.9 1.7E-24 3.6E-29 204.3 26.4 275 34-338 1-284 (356)
21 PRK10874 cysteine sulfinate de 99.9 1.2E-24 2.5E-29 208.6 24.1 294 34-350 22-333 (401)
22 COG0156 BioF 7-keto-8-aminopel 99.9 1.9E-24 4.2E-29 201.2 22.8 272 33-351 40-330 (388)
23 PLN03032 serine decarboxylase; 99.9 2.2E-23 4.8E-28 195.3 29.7 272 43-340 35-322 (374)
24 PRK09295 bifunctional cysteine 99.9 2.6E-24 5.6E-29 206.5 24.0 295 34-350 26-339 (406)
25 TIGR03392 FeS_syn_CsdA cystein 99.9 3.4E-24 7.4E-29 205.2 24.2 295 34-350 19-330 (398)
26 TIGR03235 DNA_S_dndA cysteine 99.9 1.6E-24 3.4E-29 204.2 21.2 272 37-339 4-287 (353)
27 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 6.7E-24 1.4E-28 202.2 25.6 270 39-350 28-319 (387)
28 cd06453 SufS_like Cysteine des 99.9 9.5E-24 2.1E-28 200.4 24.0 293 37-350 5-314 (373)
29 TIGR02326 transamin_PhnW 2-ami 99.9 2.3E-23 5E-28 197.0 26.5 274 33-338 4-289 (363)
30 KOG1360 5-aminolevulinate synt 99.9 5.4E-24 1.2E-28 191.0 19.5 275 32-351 171-463 (570)
31 PRK13238 tnaA tryptophanase/L- 99.9 1.3E-23 2.8E-28 203.0 22.9 301 9-353 10-355 (460)
32 TIGR01822 2am3keto_CoA 2-amino 99.9 2.2E-23 4.8E-28 199.2 24.3 251 44-338 54-318 (393)
33 TIGR01976 am_tr_V_VC1184 cyste 99.9 2.1E-23 4.6E-28 199.6 23.8 291 33-350 19-335 (397)
34 PLN02855 Bifunctional selenocy 99.9 2.2E-23 4.9E-28 201.1 24.1 281 37-338 38-335 (424)
35 TIGR01977 am_tr_V_EF2568 cyste 99.9 2.3E-23 5E-28 197.9 23.7 292 39-350 7-311 (376)
36 KOG2862 Alanine-glyoxylate ami 99.9 3E-23 6.4E-28 181.0 22.0 295 34-357 19-328 (385)
37 PRK02948 cysteine desulfurase; 99.9 1.5E-23 3.2E-28 199.7 21.8 266 36-338 5-282 (381)
38 TIGR01979 sufS cysteine desulf 99.9 6.1E-23 1.3E-27 196.8 24.7 297 34-350 21-336 (403)
39 TIGR03402 FeS_nifS cysteine de 99.9 3.6E-23 7.9E-28 196.8 21.7 268 37-338 5-282 (379)
40 KOG1549 Cysteine desulfurase N 99.9 2.1E-23 4.5E-28 192.0 18.7 204 32-258 43-257 (428)
41 COG0436 Aspartate/tyrosine/aro 99.9 2.2E-22 4.7E-27 190.9 26.2 288 32-353 29-334 (393)
42 PRK07179 hypothetical protein; 99.9 1.5E-22 3.3E-27 194.3 24.9 269 34-350 56-337 (407)
43 TIGR02006 IscS cysteine desulf 99.9 5.5E-23 1.2E-27 197.0 21.4 272 34-338 6-289 (402)
44 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.7E-22 5.8E-27 190.1 25.7 266 39-351 16-307 (370)
45 cd00615 Orn_deC_like Ornithine 99.9 1.2E-23 2.6E-28 193.1 15.7 223 82-331 64-294 (294)
46 PRK13479 2-aminoethylphosphona 99.9 2.5E-22 5.3E-27 190.4 24.6 275 34-338 7-290 (368)
47 TIGR01788 Glu-decarb-GAD gluta 99.9 6.8E-22 1.5E-26 189.0 27.3 283 40-351 50-365 (431)
48 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.7E-22 3.7E-27 191.8 23.0 247 42-335 11-277 (379)
49 KOG0257 Kynurenine aminotransf 99.9 6.1E-22 1.3E-26 180.1 25.0 308 9-351 9-344 (420)
50 TIGR03403 nifS_epsilon cystein 99.9 2.2E-22 4.8E-27 191.6 22.6 266 37-338 5-285 (382)
51 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 7.8E-22 1.7E-26 186.4 26.0 269 37-350 7-300 (361)
52 PF01041 DegT_DnrJ_EryC1: DegT 99.9 5.8E-23 1.3E-27 194.0 18.3 226 73-338 25-267 (363)
53 PRK13520 L-tyrosine decarboxyl 99.9 4.5E-21 9.8E-26 181.8 27.1 295 17-350 5-319 (371)
54 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.2E-21 6.8E-26 181.6 25.8 285 35-350 2-298 (355)
55 PRK14012 cysteine desulfurase; 99.9 1.1E-21 2.5E-26 188.1 21.9 268 35-337 7-290 (404)
56 TIGR03588 PseC UDP-4-keto-6-de 99.9 2.4E-21 5.3E-26 184.3 22.9 248 43-337 8-284 (380)
57 PRK13237 tyrosine phenol-lyase 99.9 2.5E-21 5.4E-26 182.6 21.9 245 69-352 74-354 (460)
58 TIGR01437 selA_rel uncharacter 99.9 4.2E-21 9E-26 181.1 23.5 247 39-338 21-289 (363)
59 TIGR01814 kynureninase kynuren 99.9 2.8E-21 6.1E-26 185.4 22.6 287 33-338 28-339 (406)
60 cd06454 KBL_like KBL_like; thi 99.9 4.3E-21 9.4E-26 180.3 22.8 256 38-338 7-279 (349)
61 KOG1359 Glycine C-acetyltransf 99.9 5.2E-22 1.1E-26 172.0 15.0 267 33-349 68-350 (417)
62 PLN02955 8-amino-7-oxononanoat 99.9 3.7E-21 8E-26 183.3 21.5 268 32-350 102-400 (476)
63 cd00617 Tnase_like Tryptophana 99.9 5.1E-21 1.1E-25 182.7 22.3 243 71-352 51-329 (431)
64 cd06502 TA_like Low-specificit 99.9 8.2E-21 1.8E-25 177.7 23.1 266 39-350 4-283 (338)
65 cd00616 AHBA_syn 3-amino-5-hyd 99.9 4.1E-21 9E-26 180.7 20.6 240 73-351 18-275 (352)
66 TIGR03812 tyr_de_CO2_Arch tyro 99.9 3.2E-20 7E-25 176.1 26.6 268 42-349 31-323 (373)
67 TIGR01821 5aminolev_synth 5-am 99.9 1.2E-20 2.6E-25 180.9 23.0 271 33-350 46-334 (402)
68 PLN02483 serine palmitoyltrans 99.9 1.3E-20 2.9E-25 183.8 23.7 258 45-350 122-405 (489)
69 PRK06108 aspartate aminotransf 99.9 4.9E-20 1.1E-24 175.4 26.6 299 14-351 7-324 (382)
70 PLN02724 Molybdenum cofactor s 99.9 9.3E-21 2E-25 195.1 22.9 290 33-338 36-372 (805)
71 PLN03227 serine palmitoyltrans 99.9 2.3E-20 4.9E-25 177.8 23.3 270 37-351 3-309 (392)
72 TIGR00858 bioF 8-amino-7-oxono 99.9 3.8E-20 8.2E-25 174.6 23.9 273 32-351 17-305 (360)
73 PRK09064 5-aminolevulinate syn 99.9 2.9E-20 6.2E-25 178.6 23.4 271 33-350 47-335 (407)
74 PLN00175 aminotransferase fami 99.9 8.4E-20 1.8E-24 175.3 26.4 307 9-355 33-354 (413)
75 TIGR03799 NOD_PanD_pyr putativ 99.9 2.1E-20 4.6E-25 182.3 22.2 264 71-354 123-441 (522)
76 PRK08960 hypothetical protein; 99.9 1.2E-19 2.6E-24 173.2 26.9 304 9-352 6-328 (387)
77 TIGR01328 met_gam_lyase methio 99.9 1.5E-20 3.3E-25 178.8 20.2 225 62-335 50-281 (391)
78 PRK03080 phosphoserine aminotr 99.9 3.9E-21 8.4E-26 182.5 15.8 270 32-338 12-298 (378)
79 TIGR02618 tyr_phenol_ly tyrosi 99.9 1.4E-20 3.1E-25 177.1 19.3 245 69-352 67-347 (450)
80 PRK08861 cystathionine gamma-s 99.9 1.2E-20 2.7E-25 178.5 18.8 222 62-333 44-271 (388)
81 PRK12414 putative aminotransfe 99.9 1.5E-19 3.2E-24 172.2 26.4 304 9-352 8-326 (384)
82 PRK05355 3-phosphoserine/phosp 99.9 7.3E-21 1.6E-25 179.0 17.1 272 32-334 3-283 (360)
83 PRK08574 cystathionine gamma-s 99.9 1.1E-20 2.5E-25 179.2 18.5 214 71-333 51-270 (385)
84 PRK13392 5-aminolevulinate syn 99.9 3.8E-20 8.2E-25 177.9 22.2 270 34-350 48-335 (410)
85 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3.4E-20 7.3E-25 175.5 20.8 185 42-259 8-197 (376)
86 PRK13393 5-aminolevulinate syn 99.9 9E-20 2E-24 175.0 23.9 271 33-350 46-334 (406)
87 PRK06939 2-amino-3-ketobutyrat 99.9 1E-19 2.2E-24 174.1 24.2 263 33-338 44-322 (397)
88 PLN02263 serine decarboxylase 99.9 2.6E-19 5.6E-24 170.5 26.4 243 74-340 130-389 (470)
89 COG0076 GadB Glutamate decarbo 99.9 1.2E-19 2.7E-24 174.0 24.2 282 34-350 65-379 (460)
90 PRK07777 aminotransferase; Val 99.9 4E-19 8.7E-24 169.5 27.2 303 10-352 4-324 (387)
91 PLN02822 serine palmitoyltrans 99.9 1.4E-19 3E-24 176.4 24.4 262 44-351 125-406 (481)
92 TIGR03540 DapC_direct LL-diami 99.9 9.5E-19 2.1E-23 166.7 29.2 282 32-351 30-328 (383)
93 cd00613 GDC-P Glycine cleavage 99.9 3.3E-19 7.2E-24 170.7 26.2 253 77-351 64-346 (398)
94 PRK07811 cystathionine gamma-s 99.9 7.1E-20 1.5E-24 174.1 21.0 216 72-335 60-282 (388)
95 PRK09082 methionine aminotrans 99.9 1.5E-19 3.3E-24 172.3 23.3 304 9-352 9-328 (386)
96 PLN02242 methionine gamma-lyas 99.9 4.1E-20 8.9E-25 176.9 19.4 222 71-338 74-303 (418)
97 PRK07337 aminotransferase; Val 99.9 2.7E-19 5.8E-24 170.8 25.0 302 11-352 6-326 (388)
98 PRK07504 O-succinylhomoserine 99.9 3.6E-20 7.9E-25 176.6 18.9 223 62-334 56-285 (398)
99 PRK06767 methionine gamma-lyas 99.9 3E-20 6.5E-25 176.7 18.2 224 63-336 53-283 (386)
100 PRK08133 O-succinylhomoserine 99.8 4.7E-20 1E-24 175.4 19.3 245 38-335 30-281 (390)
101 PRK10534 L-threonine aldolase; 99.8 1.5E-19 3.2E-24 169.0 22.0 270 35-351 3-283 (333)
102 PRK07309 aromatic amino acid a 99.8 7.7E-19 1.7E-23 167.7 27.3 312 1-351 1-328 (391)
103 PRK07503 methionine gamma-lyas 99.8 5.5E-20 1.2E-24 175.6 19.3 216 71-333 63-284 (403)
104 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 1.8E-20 3.9E-25 175.8 15.3 230 82-338 71-327 (417)
105 PRK07810 O-succinylhomoserine 99.8 5.2E-20 1.1E-24 175.6 18.4 222 63-334 62-290 (403)
106 TIGR01324 cysta_beta_ly_B cyst 99.8 5.6E-20 1.2E-24 173.7 18.5 215 70-333 47-267 (377)
107 PRK06290 aspartate aminotransf 99.8 1.4E-18 3.1E-23 166.5 28.4 277 33-352 46-342 (410)
108 PRK15407 lipopolysaccharide bi 99.8 1.9E-19 4.1E-24 173.3 22.2 163 73-259 63-236 (438)
109 PRK08361 aspartate aminotransf 99.8 3.6E-19 7.9E-24 170.0 24.0 285 31-355 33-335 (391)
110 PRK08912 hypothetical protein; 99.8 8.4E-19 1.8E-23 167.3 26.3 307 7-353 3-325 (387)
111 PRK06207 aspartate aminotransf 99.8 1.1E-18 2.3E-23 167.4 27.0 283 33-353 41-345 (405)
112 TIGR01329 cysta_beta_ly_E cyst 99.8 6.1E-20 1.3E-24 174.0 18.2 213 71-332 45-263 (378)
113 PRK05958 8-amino-7-oxononanoat 99.8 5.7E-19 1.2E-23 168.2 24.9 272 32-350 40-326 (385)
114 PRK06234 methionine gamma-lyas 99.8 9.7E-20 2.1E-24 173.9 19.4 216 71-333 62-285 (400)
115 PRK08776 cystathionine gamma-s 99.8 1.1E-19 2.3E-24 173.4 19.4 214 71-333 58-278 (405)
116 PRK05968 hypothetical protein; 99.8 1.4E-19 3.1E-24 172.1 20.2 218 71-337 61-285 (389)
117 PRK08068 transaminase; Reviewe 99.8 1.4E-18 3.1E-23 165.8 27.2 303 10-352 7-332 (389)
118 PRK07682 hypothetical protein; 99.8 8.4E-19 1.8E-23 166.8 25.5 283 32-355 21-321 (378)
119 PRK05942 aspartate aminotransf 99.8 1.9E-18 4.2E-23 165.2 27.8 280 32-351 36-334 (394)
120 PRK07269 cystathionine gamma-s 99.8 1.6E-19 3.4E-24 170.0 19.9 219 62-333 45-269 (364)
121 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.1E-19 2.5E-24 172.4 19.1 221 62-333 45-271 (380)
122 PRK08114 cystathionine beta-ly 99.8 5.8E-20 1.2E-24 173.4 16.9 220 63-333 54-281 (395)
123 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 3.3E-19 7.2E-24 169.2 22.0 162 73-259 31-196 (375)
124 PRK07681 aspartate aminotransf 99.8 2.6E-18 5.6E-23 164.6 28.3 301 10-351 7-330 (399)
125 cd00614 CGS_like CGS_like: Cys 99.8 1E-19 2.2E-24 172.2 18.3 215 71-333 38-258 (369)
126 TIGR01825 gly_Cac_T_rel pyrido 99.8 6.5E-19 1.4E-23 167.9 24.0 263 32-338 34-310 (385)
127 PRK05613 O-acetylhomoserine am 99.8 1.2E-19 2.7E-24 173.9 18.8 192 36-258 36-233 (437)
128 cd00611 PSAT_like Phosphoserin 99.8 2.5E-20 5.3E-25 175.6 13.8 267 34-334 1-281 (355)
129 PRK08249 cystathionine gamma-s 99.8 1.1E-19 2.3E-24 173.2 18.2 214 71-333 62-281 (398)
130 PRK06348 aspartate aminotransf 99.8 1.9E-18 4.1E-23 164.7 26.7 309 5-355 3-330 (384)
131 PRK07366 succinyldiaminopimela 99.8 1.9E-18 4.1E-23 164.9 26.7 304 9-352 4-331 (388)
132 PRK06225 aspartate aminotransf 99.8 2.3E-18 4.9E-23 164.0 26.5 282 32-355 29-321 (380)
133 PRK05957 aspartate aminotransf 99.8 3.8E-18 8.3E-23 162.8 27.4 302 11-351 7-326 (389)
134 PRK09276 LL-diaminopimelate am 99.8 4.3E-18 9.4E-23 162.3 27.7 280 32-351 32-330 (385)
135 PRK07050 cystathionine beta-ly 99.8 1.4E-19 3.1E-24 172.1 17.4 221 62-332 56-282 (394)
136 PRK04311 selenocysteine syntha 99.8 1.3E-18 2.9E-23 167.4 24.0 255 38-332 93-376 (464)
137 PRK08247 cystathionine gamma-s 99.8 5.5E-19 1.2E-23 167.0 21.0 224 62-336 43-273 (366)
138 TIGR03576 pyridox_MJ0158 pyrid 99.8 6.2E-19 1.3E-23 165.0 21.0 248 44-352 35-289 (346)
139 PRK04366 glycine dehydrogenase 99.8 1.3E-18 2.7E-23 169.9 24.0 280 41-350 80-385 (481)
140 PRK08045 cystathionine gamma-s 99.8 2.3E-19 5E-24 170.2 18.2 221 63-333 44-270 (386)
141 PLN02880 tyrosine decarboxylas 99.8 1.7E-18 3.6E-23 168.6 24.5 264 72-352 117-419 (490)
142 PRK09028 cystathionine beta-ly 99.8 2.3E-19 5.1E-24 169.7 17.9 213 72-333 60-278 (394)
143 PRK08064 cystathionine beta-ly 99.8 2E-19 4.3E-24 171.2 17.5 214 71-333 52-271 (390)
144 PRK13355 bifunctional HTH-doma 99.8 3.6E-18 7.8E-23 168.6 27.0 308 8-352 119-453 (517)
145 PRK05764 aspartate aminotransf 99.8 3.6E-18 7.7E-23 163.3 26.2 303 8-352 4-331 (393)
146 PLN02509 cystathionine beta-ly 99.8 2E-19 4.3E-24 173.1 17.4 215 71-334 131-352 (464)
147 PRK08134 O-acetylhomoserine am 99.8 1.7E-19 3.7E-24 173.1 16.9 165 62-256 55-225 (433)
148 TIGR00474 selA seryl-tRNA(sec) 99.8 8.9E-19 1.9E-23 168.2 21.8 196 38-259 88-303 (454)
149 PRK06176 cystathionine gamma-s 99.8 1.8E-19 3.8E-24 170.8 16.7 220 62-332 41-266 (380)
150 cd06450 DOPA_deC_like DOPA dec 99.8 3.6E-19 7.7E-24 167.2 18.7 226 73-351 34-286 (345)
151 PLN02721 threonine aldolase 99.8 3.3E-18 7.2E-23 161.1 25.0 272 34-351 8-297 (353)
152 PRK07683 aminotransferase A; V 99.8 5.5E-18 1.2E-22 161.7 26.1 304 9-354 6-327 (387)
153 PRK07671 cystathionine beta-ly 99.8 6.7E-19 1.5E-23 166.7 19.6 219 63-332 42-266 (377)
154 PRK08636 aspartate aminotransf 99.8 9.5E-18 2.1E-22 160.9 27.5 310 6-352 4-340 (403)
155 PRK05937 8-amino-7-oxononanoat 99.8 1.3E-18 2.8E-23 165.0 21.1 257 33-332 5-284 (370)
156 PLN02590 probable tyrosine dec 99.8 6.8E-18 1.5E-22 164.7 26.3 264 72-352 165-467 (539)
157 TIGR02080 O_succ_thio_ly O-suc 99.8 8.2E-19 1.8E-23 166.3 19.1 215 71-333 49-269 (382)
158 TIGR03531 selenium_SpcS O-phos 99.8 3.2E-18 6.9E-23 163.2 23.0 237 73-338 101-354 (444)
159 PRK05939 hypothetical protein; 99.8 7E-19 1.5E-23 167.4 18.2 157 62-249 38-197 (397)
160 TIGR03537 DapC succinyldiamino 99.8 7.5E-18 1.6E-22 158.6 25.1 267 43-351 14-296 (350)
161 PLN02368 alanine transaminase 99.8 5.2E-18 1.1E-22 162.0 23.7 307 5-351 8-396 (407)
162 TIGR01364 serC_1 phosphoserine 99.8 7.4E-19 1.6E-23 164.6 17.4 266 42-337 2-276 (349)
163 PLN02656 tyrosine transaminase 99.8 7.3E-18 1.6E-22 161.9 24.7 288 32-351 32-342 (409)
164 PRK06460 hypothetical protein; 99.8 1.2E-18 2.5E-23 165.1 18.8 213 71-332 43-261 (376)
165 PRK08363 alanine aminotransfer 99.8 1.2E-17 2.7E-22 159.8 26.0 282 32-352 31-335 (398)
166 PRK06084 O-acetylhomoserine am 99.8 1.8E-18 3.9E-23 165.9 20.1 167 62-258 49-221 (425)
167 TIGR01141 hisC histidinol-phos 99.8 1.7E-18 3.7E-23 162.7 19.3 266 32-351 20-298 (346)
168 COG2008 GLY1 Threonine aldolas 99.8 7.5E-18 1.6E-22 151.7 21.6 271 38-352 5-291 (342)
169 PLN02187 rooty/superroot1 99.8 1.3E-17 2.9E-22 162.0 25.3 288 32-351 67-377 (462)
170 PRK07324 transaminase; Validat 99.8 5.7E-18 1.2E-22 160.7 22.2 233 84-351 69-314 (373)
171 PRK14807 histidinol-phosphate 99.8 1.2E-17 2.7E-22 157.2 24.3 267 33-351 24-300 (351)
172 PRK09147 succinyldiaminopimela 99.8 2.3E-17 4.9E-22 157.9 26.4 298 10-351 3-334 (396)
173 PLN00145 tyrosine/nicotianamin 99.8 1.7E-17 3.6E-22 160.1 25.6 289 32-351 53-363 (430)
174 PRK06702 O-acetylhomoserine am 99.8 4.8E-18 1E-22 162.1 21.2 160 71-257 59-224 (432)
175 TIGR01366 serC_3 phosphoserine 99.8 1.6E-18 3.4E-23 163.5 17.6 271 33-338 4-287 (361)
176 PRK05967 cystathionine beta-ly 99.8 1.3E-18 2.8E-23 164.4 16.8 214 70-332 61-280 (395)
177 PRK07812 O-acetylhomoserine am 99.8 2.8E-18 6.2E-23 164.5 18.9 160 71-257 67-232 (436)
178 PLN02376 1-aminocyclopropane-1 99.8 7.9E-18 1.7E-22 164.6 22.4 240 76-352 97-373 (496)
179 PRK08248 O-acetylhomoserine am 99.8 3.7E-18 8E-23 163.9 19.7 160 71-258 62-227 (431)
180 PTZ00433 tyrosine aminotransfe 99.8 1.7E-17 3.7E-22 159.5 24.2 285 32-351 34-347 (412)
181 TIGR01264 tyr_amTase_E tyrosin 99.8 2.8E-17 6E-22 157.6 25.4 283 32-352 32-339 (401)
182 PLN02414 glycine dehydrogenase 99.8 1E-17 2.2E-22 172.3 23.2 255 77-352 568-847 (993)
183 PRK07550 hypothetical protein; 99.8 1.1E-16 2.4E-21 152.6 28.7 281 32-352 30-328 (386)
184 PLN02231 alanine transaminase 99.8 3.4E-17 7.3E-22 161.2 25.6 301 13-351 112-456 (534)
185 PRK06434 cystathionine gamma-l 99.8 2.4E-18 5.2E-23 162.4 16.8 219 62-333 55-279 (384)
186 PTZ00377 alanine aminotransfer 99.8 5.1E-17 1.1E-21 159.1 26.7 271 44-351 90-404 (481)
187 TIGR01265 tyr_nico_aTase tyros 99.8 1.3E-16 2.9E-21 152.9 28.5 285 31-352 31-341 (403)
188 PRK05994 O-acetylhomoserine am 99.8 7.9E-18 1.7E-22 161.8 19.7 157 72-256 62-224 (427)
189 PRK07568 aspartate aminotransf 99.8 8.3E-17 1.8E-21 154.1 26.3 277 33-351 32-327 (397)
190 PRK09265 aminotransferase AlaT 99.8 9E-17 2E-21 154.2 26.5 307 1-352 1-340 (404)
191 PRK01533 histidinol-phosphate 99.8 8.3E-18 1.8E-22 159.0 19.0 263 32-350 30-308 (366)
192 COG0626 MetC Cystathionine bet 99.8 1.3E-17 2.8E-22 155.5 19.6 223 62-332 54-282 (396)
193 PRK06855 aminotransferase; Val 99.8 7.4E-17 1.6E-21 155.9 25.7 290 33-352 34-345 (433)
194 PLN03026 histidinol-phosphate 99.8 3.1E-17 6.8E-22 156.0 22.7 266 32-351 53-328 (380)
195 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 5E-18 1.1E-22 159.9 16.9 222 62-333 46-275 (386)
196 PRK08153 histidinol-phosphate 99.8 4.1E-17 9E-22 154.6 22.9 264 33-351 34-310 (369)
197 PRK09148 aminotransferase; Val 99.8 1.3E-16 2.8E-21 153.1 26.5 301 11-352 6-330 (405)
198 COG2873 MET17 O-acetylhomoseri 99.8 1E-17 2.2E-22 150.3 17.4 191 34-256 27-223 (426)
199 PRK04870 histidinol-phosphate 99.8 2.5E-17 5.5E-22 155.4 21.2 270 32-351 27-305 (356)
200 PRK05387 histidinol-phosphate 99.8 2E-17 4.3E-22 155.9 20.4 266 32-351 25-300 (353)
201 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 1.2E-17 2.6E-22 160.4 19.1 165 63-257 49-218 (418)
202 PRK06107 aspartate aminotransf 99.8 9.1E-17 2E-21 154.0 24.9 280 32-351 34-333 (402)
203 PF00282 Pyridoxal_deC: Pyrido 99.8 4.6E-17 9.9E-22 153.5 22.4 243 71-338 73-361 (373)
204 PRK15029 arginine decarboxylas 99.8 1.9E-17 4.2E-22 166.0 20.7 225 82-332 210-464 (755)
205 PRK03317 histidinol-phosphate 99.8 6.5E-17 1.4E-21 153.3 23.2 272 33-350 28-315 (368)
206 PRK08175 aminotransferase; Val 99.8 3E-16 6.6E-21 150.1 28.0 281 31-352 29-329 (395)
207 PLN02450 1-aminocyclopropane-1 99.8 8.4E-17 1.8E-21 156.7 24.5 285 33-351 40-365 (468)
208 PRK03158 histidinol-phosphate 99.8 3.4E-17 7.3E-22 154.7 20.5 265 32-351 30-309 (359)
209 COG0079 HisC Histidinol-phosph 99.8 8.4E-17 1.8E-21 150.3 22.5 265 32-351 23-300 (356)
210 PRK02731 histidinol-phosphate 99.8 9.1E-17 2E-21 152.2 22.6 264 32-350 33-311 (367)
211 cd00609 AAT_like Aspartate ami 99.8 2.1E-16 4.5E-21 148.1 24.7 247 73-352 36-298 (350)
212 PLN00143 tyrosine/nicotianamin 99.8 2.4E-16 5.1E-21 151.4 25.3 289 32-352 33-344 (409)
213 TIGR00461 gcvP glycine dehydro 99.8 1.3E-16 2.7E-21 162.5 23.7 255 75-352 528-807 (939)
214 PF01212 Beta_elim_lyase: Beta 99.8 2.7E-19 5.9E-24 162.4 4.0 262 39-348 4-285 (290)
215 TIGR03538 DapC_gpp succinyldia 99.8 5.8E-16 1.2E-20 148.1 26.7 295 13-351 5-333 (393)
216 PRK07582 cystathionine gamma-l 99.8 2.7E-17 5.8E-22 155.4 17.2 210 71-332 49-264 (366)
217 PRK03321 putative aminotransfe 99.8 7.6E-17 1.7E-21 151.9 19.5 266 33-351 24-303 (352)
218 PRK08056 threonine-phosphate d 99.8 2E-16 4.3E-21 149.3 22.3 265 32-351 21-301 (356)
219 PRK09105 putative aminotransfe 99.7 1.6E-16 3.5E-21 150.5 21.5 262 32-350 44-318 (370)
220 PRK00451 glycine dehydrogenase 99.7 7.6E-17 1.6E-21 156.7 19.5 236 81-337 116-377 (447)
221 PRK05166 histidinol-phosphate 99.7 1.9E-16 4.2E-21 150.2 21.7 267 32-351 37-319 (371)
222 PRK07049 methionine gamma-lyas 99.7 1.1E-16 2.4E-21 153.7 19.4 223 63-334 75-314 (427)
223 PLN02672 methionine S-methyltr 99.7 2.4E-16 5.2E-21 162.7 22.5 278 32-351 698-1007(1082)
224 PRK07590 L,L-diaminopimelate a 99.7 1.3E-15 2.7E-20 146.5 26.2 288 32-352 35-354 (409)
225 PLN02452 phosphoserine transam 99.7 9.7E-17 2.1E-21 150.5 17.9 273 32-334 7-288 (365)
226 PRK00950 histidinol-phosphate 99.7 1.8E-16 3.9E-21 149.9 20.0 261 32-350 35-306 (361)
227 PRK15481 transcriptional regul 99.7 4.6E-16 9.9E-21 150.5 23.1 218 101-351 144-374 (431)
228 PF00155 Aminotran_1_2: Aminot 99.7 2.3E-16 4.9E-21 149.2 20.5 240 75-351 46-313 (363)
229 PRK05367 glycine dehydrogenase 99.7 4.7E-16 1E-20 160.7 23.7 251 75-352 540-815 (954)
230 PRK06836 aspartate aminotransf 99.7 1.2E-15 2.6E-20 145.9 24.3 279 34-351 36-337 (394)
231 TIGR02617 tnaA_trp_ase tryptop 99.7 6.2E-16 1.3E-20 144.6 21.5 275 34-352 44-362 (467)
232 cd01494 AAT_I Aspartate aminot 99.7 1.1E-16 2.4E-21 134.1 15.1 163 82-257 5-170 (170)
233 PLN02607 1-aminocyclopropane-1 99.7 1.1E-15 2.5E-20 147.8 23.3 286 33-352 49-373 (447)
234 PRK07865 N-succinyldiaminopime 99.7 1.8E-15 3.9E-20 143.2 24.1 286 9-350 4-312 (364)
235 PRK02610 histidinol-phosphate 99.7 1.4E-15 3.1E-20 144.4 23.3 274 32-351 29-322 (374)
236 PRK01688 histidinol-phosphate 99.7 2.6E-16 5.7E-21 148.1 17.0 232 82-351 62-304 (351)
237 PRK13578 ornithine decarboxyla 99.7 1.7E-16 3.7E-21 157.8 15.6 235 82-337 179-445 (720)
238 PRK04781 histidinol-phosphate 99.7 1.8E-15 3.8E-20 143.2 20.8 237 82-351 64-311 (364)
239 PRK14809 histidinol-phosphate 99.7 2.8E-15 6.1E-20 141.5 22.1 263 32-350 31-305 (357)
240 PRK09257 aromatic amino acid a 99.7 2.4E-15 5.3E-20 143.9 21.8 310 11-351 4-354 (396)
241 TIGR03539 DapC_actino succinyl 99.7 3.7E-15 8E-20 140.7 22.6 263 32-350 22-306 (357)
242 PTZ00376 aspartate aminotransf 99.7 2.6E-15 5.6E-20 144.1 20.5 224 103-351 103-359 (404)
243 PF06838 Met_gamma_lyase: Meth 99.7 1.6E-14 3.5E-19 130.2 23.6 250 45-339 27-303 (403)
244 PRK06358 threonine-phosphate d 99.7 5.8E-15 1.3E-19 139.2 21.8 264 33-351 21-302 (354)
245 TIGR01365 serC_2 phosphoserine 99.7 9.3E-16 2E-20 144.0 16.0 269 35-338 6-289 (374)
246 TIGR03542 DAPAT_plant LL-diami 99.7 2.5E-14 5.4E-19 137.2 26.2 279 33-351 35-346 (402)
247 KOG1368 Threonine aldolase [Am 99.7 3.8E-15 8.2E-20 129.9 18.3 260 44-354 35-317 (384)
248 KOG0053 Cystathionine beta-lya 99.7 1.7E-15 3.7E-20 139.7 17.0 220 63-332 69-294 (409)
249 PRK07908 hypothetical protein; 99.7 1.3E-14 2.7E-19 136.6 23.3 262 31-351 22-294 (349)
250 KOG1357 Serine palmitoyltransf 99.7 2.5E-15 5.4E-20 137.8 17.7 265 39-351 152-442 (519)
251 TIGR03811 tyr_de_CO2_Ent tyros 99.7 1.1E-14 2.4E-19 143.6 23.1 256 71-355 117-506 (608)
252 PRK04635 histidinol-phosphate 99.7 2E-15 4.4E-20 142.3 16.9 227 83-350 66-303 (354)
253 PRK05839 hypothetical protein; 99.7 2.8E-14 6E-19 135.5 24.7 267 33-351 26-317 (374)
254 PRK12566 glycine dehydrogenase 99.7 6.4E-15 1.4E-19 149.3 21.1 150 83-251 549-711 (954)
255 PLN02397 aspartate transaminas 99.7 7.4E-15 1.6E-19 141.5 20.6 223 106-351 127-377 (423)
256 COG1167 ARO8 Transcriptional r 99.7 1.5E-14 3.3E-19 140.3 22.4 246 75-352 134-395 (459)
257 PRK07392 threonine-phosphate d 99.7 3.4E-14 7.4E-19 134.3 24.1 263 33-351 24-304 (360)
258 KOG0259 Tyrosine aminotransfer 99.7 3.1E-14 6.8E-19 128.1 22.1 275 43-350 79-371 (447)
259 COG1103 Archaea-specific pyrid 99.6 2.4E-14 5.2E-19 123.4 19.5 256 32-338 16-305 (382)
260 PRK15400 lysine decarboxylase 99.6 4.5E-15 9.8E-20 147.6 17.0 219 82-332 200-442 (714)
261 PRK03967 histidinol-phosphate 99.6 2.3E-14 4.9E-19 134.2 20.8 259 33-350 20-287 (337)
262 PRK07505 hypothetical protein; 99.6 3.9E-14 8.5E-19 135.8 22.6 253 33-328 48-321 (402)
263 PRK12462 phosphoserine aminotr 99.6 1.5E-14 3.3E-19 134.5 18.5 273 33-335 5-288 (364)
264 TIGR01140 L_thr_O3P_dcar L-thr 99.6 1.7E-14 3.7E-19 134.7 18.8 218 83-351 53-282 (330)
265 TIGR03801 asp_4_decarbox aspar 99.6 2.5E-14 5.5E-19 139.2 19.9 204 33-259 96-327 (521)
266 PRK15399 lysine decarboxylase 99.6 1.7E-14 3.6E-19 143.6 18.7 218 82-332 200-442 (713)
267 PRK14808 histidinol-phosphate 99.6 9E-14 1.9E-18 130.0 21.9 258 32-351 20-289 (335)
268 PRK09275 aspartate aminotransf 99.6 4.1E-14 9E-19 137.9 19.8 147 100-259 163-328 (527)
269 PRK06425 histidinol-phosphate 99.6 5.2E-14 1.1E-18 131.5 19.1 220 83-350 46-279 (332)
270 COG1982 LdcC Arginine/lysine/o 99.6 5E-14 1.1E-18 135.0 16.6 228 82-338 75-319 (557)
271 PRK00854 rocD ornithine--oxo-a 99.6 3.6E-13 7.8E-18 129.2 22.5 248 44-335 59-330 (401)
272 COG1003 GcvP Glycine cleavage 99.6 2.5E-13 5.5E-18 124.4 19.8 247 80-352 112-385 (496)
273 PRK09440 avtA valine--pyruvate 99.6 7.3E-13 1.6E-17 127.7 22.7 243 77-352 78-347 (416)
274 TIGR00707 argD acetylornithine 99.6 4.5E-13 9.7E-18 127.5 20.7 273 32-351 28-330 (379)
275 PRK05664 threonine-phosphate d 99.6 5.3E-13 1.2E-17 124.6 20.4 214 83-350 55-278 (330)
276 cd00610 OAT_like Acetyl ornith 99.6 5.6E-13 1.2E-17 128.3 21.1 279 32-351 37-354 (413)
277 PRK08637 hypothetical protein; 99.5 5.6E-13 1.2E-17 127.3 20.1 225 101-351 72-334 (388)
278 PRK01278 argD acetylornithine 99.5 7.8E-13 1.7E-17 126.3 20.3 242 44-331 49-313 (389)
279 COG3844 Kynureninase [Amino ac 99.5 8E-13 1.7E-17 117.0 18.5 273 43-338 43-335 (407)
280 KOG0256 1-aminocyclopropane-1- 99.5 1.1E-12 2.5E-17 119.2 19.8 226 100-353 149-398 (471)
281 PLN02414 glycine dehydrogenase 99.5 9.6E-13 2.1E-17 136.0 21.4 276 42-350 116-418 (993)
282 PRK03244 argD acetylornithine 99.5 3.1E-12 6.8E-17 122.6 23.2 260 44-351 61-342 (398)
283 PRK06959 putative threonine-ph 99.5 1.6E-12 3.5E-17 121.7 19.2 215 82-350 58-283 (339)
284 TIGR03246 arg_catab_astC succi 99.5 1.8E-12 4E-17 124.0 19.6 251 32-333 36-319 (397)
285 PRK04073 rocD ornithine--oxo-a 99.5 7.6E-12 1.6E-16 119.8 22.1 256 44-350 58-345 (396)
286 COG1921 SelA Selenocysteine sy 99.5 2.7E-12 5.8E-17 118.2 17.9 229 39-308 35-271 (395)
287 PRK08354 putative aminotransfe 99.5 6.1E-12 1.3E-16 116.5 19.8 178 32-256 9-196 (311)
288 PRK05367 glycine dehydrogenase 99.4 1.4E-11 2.9E-16 128.0 23.0 239 81-350 125-390 (954)
289 PTZ00125 ornithine aminotransf 99.4 8.9E-12 1.9E-16 119.5 19.5 246 43-332 48-318 (400)
290 TIGR01885 Orn_aminotrans ornit 99.4 4.6E-11 9.9E-16 114.6 23.8 243 44-336 55-330 (401)
291 PRK02936 argD acetylornithine 99.4 2.3E-11 5E-16 115.7 21.2 262 44-351 47-328 (377)
292 KOG1383 Glutamate decarboxylas 99.4 6.5E-12 1.4E-16 116.3 15.6 242 73-339 116-381 (491)
293 PF03841 SelA: L-seryl-tRNA se 99.4 6.1E-13 1.3E-17 121.5 8.4 246 39-332 14-296 (367)
294 PRK02627 acetylornithine amino 99.4 4.8E-11 1E-15 114.2 21.5 261 44-350 57-342 (396)
295 COG4100 Cystathionine beta-lya 99.4 2.7E-11 5.9E-16 106.1 17.5 231 73-338 65-313 (416)
296 PRK05093 argD bifunctional N-s 99.4 2.6E-11 5.5E-16 116.4 18.7 262 44-351 58-345 (403)
297 PRK12381 bifunctional succinyl 99.4 4.8E-11 1E-15 114.6 19.3 243 44-333 57-323 (406)
298 COG0001 HemL Glutamate-1-semia 99.3 5.6E-10 1.2E-14 104.2 23.7 267 32-338 54-352 (432)
299 TIGR00713 hemL glutamate-1-sem 99.3 2.1E-10 4.5E-15 110.9 21.5 198 32-259 49-279 (423)
300 PRK03715 argD acetylornithine 99.3 2.7E-10 5.9E-15 108.8 20.9 271 32-350 37-337 (395)
301 COG4992 ArgD Ornithine/acetylo 99.3 1.8E-10 3.8E-15 106.4 18.0 257 31-332 42-323 (404)
302 KOG0629 Glutamate decarboxylas 99.3 3.6E-11 7.8E-16 110.0 12.4 257 73-344 137-426 (510)
303 PRK04260 acetylornithine amino 99.3 8.6E-10 1.9E-14 104.9 22.0 258 44-350 46-325 (375)
304 COG3033 TnaA Tryptophanase [Am 99.3 4.2E-10 9E-15 101.1 17.5 270 39-352 56-365 (471)
305 PRK12403 putative aminotransfe 99.2 1.1E-09 2.4E-14 106.5 20.9 247 44-331 72-366 (460)
306 PRK08117 4-aminobutyrate amino 99.2 1.4E-09 2.9E-14 105.4 19.6 256 44-332 61-346 (433)
307 PLN02624 ornithine-delta-amino 99.2 2.6E-09 5.6E-14 104.4 21.1 239 44-332 93-364 (474)
308 TIGR03372 putres_am_tran putre 99.2 1.9E-09 4.2E-14 103.9 19.9 247 44-332 93-366 (442)
309 PRK00062 glutamate-1-semialdeh 99.2 2E-09 4.3E-14 104.0 19.4 258 31-331 50-337 (426)
310 PLN00144 acetylornithine trans 99.2 4.9E-09 1.1E-13 99.8 21.2 261 44-350 33-327 (382)
311 KOG0634 Aromatic amino acid am 99.2 9.3E-09 2E-13 94.8 21.8 224 95-351 123-394 (472)
312 PRK00615 glutamate-1-semialdeh 99.2 7.8E-09 1.7E-13 99.6 22.6 252 44-336 71-350 (433)
313 PLN02760 4-aminobutyrate:pyruv 99.2 3.7E-09 8E-14 103.7 19.7 262 32-332 90-407 (504)
314 PRK04612 argD acetylornithine 99.1 4.4E-09 9.6E-14 100.8 19.6 260 32-332 41-326 (408)
315 PLN02482 glutamate-1-semialdeh 99.1 2.2E-08 4.7E-13 97.5 22.9 246 44-332 117-387 (474)
316 KOG0628 Aromatic-L-amino-acid/ 99.1 9.5E-09 2.1E-13 95.3 19.0 265 71-354 107-413 (511)
317 COG0403 GcvP Glycine cleavage 99.1 3E-08 6.5E-13 91.5 22.1 232 83-338 126-386 (450)
318 KOG0633 Histidinol phosphate a 99.1 4.3E-09 9.2E-14 90.8 15.4 230 86-351 78-319 (375)
319 PRK08360 4-aminobutyrate amino 99.1 1.9E-08 4.1E-13 97.5 21.7 268 32-332 42-343 (443)
320 PRK07046 aminotransferase; Val 99.1 2E-08 4.3E-13 97.5 21.8 244 44-331 93-363 (453)
321 PRK05964 adenosylmethionine--8 99.1 1.2E-08 2.6E-13 98.5 20.2 266 32-332 43-346 (423)
322 PRK11522 putrescine--2-oxoglut 99.1 1.6E-08 3.6E-13 98.1 21.0 246 44-332 100-373 (459)
323 TIGR00461 gcvP glycine dehydro 99.1 3.4E-08 7.4E-13 101.6 23.3 226 82-338 114-367 (939)
324 COG0160 GabT 4-aminobutyrate a 99.1 3E-08 6.5E-13 94.2 21.1 265 32-332 57-360 (447)
325 PRK04013 argD acetylornithine/ 99.1 1.8E-08 3.9E-13 94.9 19.3 200 32-259 25-246 (364)
326 KOG1358 Serine palmitoyltransf 99.1 2E-09 4.3E-14 97.8 11.8 272 35-352 97-395 (467)
327 PRK13360 omega amino acid--pyr 99.0 5.7E-08 1.2E-12 94.1 22.1 268 32-332 47-362 (442)
328 PRK06541 hypothetical protein; 99.0 2.5E-08 5.5E-13 97.0 19.7 266 32-332 53-365 (460)
329 PRK06105 aminotransferase; Pro 99.0 4.9E-08 1.1E-12 95.0 21.5 262 32-332 49-365 (460)
330 PRK08088 4-aminobutyrate amino 99.0 6.8E-08 1.5E-12 93.4 22.3 273 44-350 59-359 (425)
331 PRK06209 glutamate-1-semialdeh 99.0 6.2E-08 1.3E-12 93.7 21.8 253 31-331 48-328 (431)
332 PRK09792 4-aminobutyrate trans 99.0 5.2E-08 1.1E-12 94.0 21.2 286 32-351 41-359 (421)
333 PRK12389 glutamate-1-semialdeh 99.0 5.3E-08 1.2E-12 94.1 21.2 255 32-331 54-340 (428)
334 PRK06058 4-aminobutyrate amino 99.0 5E-08 1.1E-12 94.7 20.5 256 44-332 74-358 (443)
335 PF02347 GDC-P: Glycine cleava 99.0 2.4E-08 5.2E-13 94.4 17.4 223 82-332 115-364 (429)
336 PRK08593 4-aminobutyrate amino 99.0 6.4E-08 1.4E-12 93.9 20.9 256 44-331 60-345 (445)
337 PRK06777 4-aminobutyrate amino 99.0 9.3E-08 2E-12 92.2 21.8 249 44-332 58-337 (421)
338 PRK07986 adenosylmethionine--8 99.0 5E-08 1.1E-12 94.0 19.7 267 32-332 44-350 (428)
339 PRK07495 4-aminobutyrate amino 99.0 1.2E-07 2.6E-12 91.5 21.5 273 44-351 58-359 (425)
340 COG1448 TyrB Aspartate/tyrosin 99.0 7.4E-08 1.6E-12 88.0 18.5 285 11-332 4-332 (396)
341 PRK09264 diaminobutyrate--2-ox 99.0 7.5E-08 1.6E-12 93.0 19.7 256 44-331 57-337 (425)
342 PRK05769 4-aminobutyrate amino 99.0 1.5E-07 3.3E-12 91.1 21.8 253 44-332 72-358 (441)
343 TIGR00508 bioA adenosylmethion 98.9 7.6E-08 1.6E-12 92.9 19.2 256 44-333 63-354 (427)
344 PRK06062 hypothetical protein; 98.9 1.3E-07 2.7E-12 92.0 20.5 251 44-331 71-356 (451)
345 PRK06149 hypothetical protein; 98.9 1.9E-07 4.2E-12 98.8 23.3 252 44-331 601-884 (972)
346 TIGR02407 ectoine_ectB diamino 98.9 1.8E-07 4E-12 89.9 20.7 274 44-351 53-357 (412)
347 PRK06173 adenosylmethionine--8 98.9 2.9E-07 6.3E-12 88.8 22.0 286 32-351 45-373 (429)
348 TIGR00700 GABAtrnsam 4-aminobu 98.9 3.2E-07 7E-12 88.5 21.3 266 32-331 34-335 (420)
349 PRK09221 beta alanine--pyruvat 98.9 5.5E-07 1.2E-11 87.4 22.5 267 32-332 50-365 (445)
350 PRK05630 adenosylmethionine--8 98.9 1.9E-07 4.1E-12 89.9 19.0 243 44-331 58-346 (422)
351 PRK07480 putative aminotransfe 98.9 3.3E-07 7E-12 89.2 20.3 255 44-331 68-363 (456)
352 PRK06082 4-aminobutyrate amino 98.9 4.6E-07 9.9E-12 88.2 21.0 247 44-332 89-368 (459)
353 PRK07678 aminotransferase; Val 98.9 3.9E-07 8.5E-12 88.6 20.5 252 44-331 65-358 (451)
354 COG3977 Alanine-alpha-ketoisov 98.8 8.7E-07 1.9E-11 78.3 20.2 210 33-259 31-265 (417)
355 KOG2040 Glycine dehydrogenase 98.8 1.3E-07 2.8E-12 91.1 15.9 250 82-353 587-859 (1001)
356 KOG1402 Ornithine aminotransfe 98.8 3.6E-07 7.8E-12 81.6 17.1 244 43-332 76-347 (427)
357 PRK05965 hypothetical protein; 98.8 5.2E-07 1.1E-11 87.9 20.0 268 32-332 47-362 (459)
358 PRK07482 hypothetical protein; 98.8 6.6E-07 1.4E-11 87.2 20.6 267 32-331 51-366 (461)
359 PRK06917 hypothetical protein; 98.8 5E-07 1.1E-11 87.7 19.5 260 32-332 32-344 (447)
360 PRK06943 adenosylmethionine--8 98.8 1.5E-06 3.1E-11 84.6 22.5 260 32-332 55-368 (453)
361 PRK06916 adenosylmethionine--8 98.8 4.9E-07 1.1E-11 88.1 18.7 248 44-332 74-371 (460)
362 PRK06918 4-aminobutyrate amino 98.8 1.2E-06 2.6E-11 85.3 21.4 201 44-259 72-304 (451)
363 PF00202 Aminotran_3: Aminotra 98.8 6.2E-07 1.4E-11 84.0 18.0 246 44-331 34-315 (339)
364 PRK05639 4-aminobutyrate amino 98.8 1.2E-06 2.5E-11 85.3 20.3 253 44-331 71-359 (457)
365 PRK07483 hypothetical protein; 98.8 9.8E-07 2.1E-11 85.6 19.6 266 32-331 31-343 (443)
366 PRK07481 hypothetical protein; 98.7 2.4E-06 5.3E-11 83.0 22.3 269 32-332 43-360 (449)
367 PRK07036 hypothetical protein; 98.7 1.8E-06 3.9E-11 84.2 21.1 255 44-331 69-367 (466)
368 PRK06148 hypothetical protein; 98.7 1.6E-06 3.5E-11 92.0 22.3 253 44-332 640-925 (1013)
369 KOG0258 Alanine aminotransfera 98.7 1.2E-06 2.6E-11 80.0 17.8 196 43-256 87-311 (475)
370 PRK07030 adenosylmethionine--8 98.7 2.5E-06 5.4E-11 83.2 20.6 267 32-332 48-362 (466)
371 PRK06938 diaminobutyrate--2-ox 98.7 2.9E-06 6.2E-11 82.8 20.5 256 44-331 81-368 (464)
372 COG0161 BioA Adenosylmethionin 98.7 1.7E-06 3.8E-11 82.0 18.2 248 44-331 62-359 (449)
373 TIGR00709 dat 2,4-diaminobutyr 98.7 3.7E-06 8E-11 81.7 21.0 267 32-331 40-343 (442)
374 COG1932 SerC Phosphoserine ami 98.6 7.4E-07 1.6E-11 81.1 12.2 270 32-334 5-288 (365)
375 PRK12566 glycine dehydrogenase 98.6 3.4E-06 7.3E-11 86.8 18.3 227 83-338 130-381 (954)
376 PRK08742 adenosylmethionine--8 98.6 1.4E-05 3.1E-10 78.0 21.5 197 44-259 82-323 (472)
377 TIGR03251 LAT_fam L-lysine 6-t 98.6 4.4E-06 9.5E-11 80.9 17.8 83 170-257 205-298 (431)
378 PRK06931 diaminobutyrate--2-ox 98.5 1.2E-05 2.6E-10 78.4 19.9 256 44-331 76-362 (459)
379 PF05889 SLA_LP_auto_ag: Solub 98.5 2.8E-06 6E-11 78.9 13.9 177 71-258 50-237 (389)
380 KOG1401 Acetylornithine aminot 98.5 2E-05 4.3E-10 72.8 18.0 193 44-259 74-291 (433)
381 PRK08297 L-lysine aminotransfe 98.4 9.8E-06 2.1E-10 78.7 16.1 142 169-332 211-365 (443)
382 TIGR00699 GABAtrns_euk 4-amino 98.4 1.4E-05 3E-10 77.6 17.0 76 169-247 237-325 (464)
383 PF12897 Aminotran_MocR: Alani 98.4 0.00011 2.4E-09 67.8 21.0 281 31-352 22-355 (425)
384 KOG1404 Alanine-glyoxylate ami 98.4 1.9E-05 4.2E-10 72.4 15.9 112 198-332 235-352 (442)
385 PLN02974 adenosylmethionine-8- 98.2 0.00025 5.4E-09 73.3 21.0 86 171-259 567-671 (817)
386 KOG3846 L-kynurenine hydrolase 98.0 7.9E-05 1.7E-09 66.3 11.5 235 82-331 116-374 (465)
387 KOG2040 Glycine dehydrogenase 97.6 0.0034 7.3E-08 61.5 15.9 223 84-338 170-420 (1001)
388 KOG1411 Aspartate aminotransfe 97.4 0.0018 3.8E-08 58.9 11.2 206 100-333 123-360 (427)
389 KOG1403 Predicted alanine-glyo 97.4 0.0031 6.6E-08 56.3 11.6 200 38-258 57-294 (452)
390 KOG1412 Aspartate aminotransfe 97.4 0.004 8.7E-08 55.9 12.3 142 101-254 103-265 (410)
391 KOG3843 Predicted serine hydro 97.0 0.0032 6.9E-08 55.2 7.5 89 166-256 139-237 (432)
392 KOG2790 Phosphoserine aminotra 96.9 0.013 2.8E-07 52.0 11.2 273 32-336 7-295 (370)
393 PLN02994 1-aminocyclopropane-1 96.8 0.0036 7.7E-08 51.4 6.0 52 77-132 96-152 (153)
394 KOG1405 4-aminobutyrate aminot 96.2 0.042 9.2E-07 50.4 9.5 139 168-332 253-407 (484)
395 PF04131 NanE: Putative N-acet 79.6 9 0.00019 32.4 7.0 71 167-244 51-122 (192)
396 COG3010 NanE Putative N-acetyl 77.2 9.1 0.0002 32.8 6.3 71 167-244 85-157 (229)
397 COG2870 RfaE ADP-heptose synth 75.6 9.2 0.0002 36.2 6.5 63 154-216 114-178 (467)
398 cd02067 B12-binding B12 bindin 69.3 21 0.00045 27.5 6.5 43 167-209 36-78 (119)
399 PF04864 Alliinase_C: Allinase 68.0 83 0.0018 29.4 10.8 153 76-259 46-211 (363)
400 COG1504 Uncharacterized conser 67.0 16 0.00035 27.8 5.0 49 167-216 48-96 (121)
401 KOG0630 Predicted pyridoxal-de 65.2 92 0.002 30.6 10.8 92 166-259 272-376 (838)
402 PF02310 B12-binding: B12 bind 63.4 12 0.00026 28.7 4.1 53 167-219 37-91 (121)
403 PRK13396 3-deoxy-7-phosphohept 61.3 20 0.00043 33.7 5.7 56 167-222 218-284 (352)
404 PRK02261 methylaspartate mutas 59.3 45 0.00097 26.7 6.7 51 154-209 32-82 (137)
405 PRK13397 3-deoxy-7-phosphohept 58.4 32 0.00068 30.7 6.2 58 165-222 129-197 (250)
406 cd02071 MM_CoA_mut_B12_BD meth 58.2 39 0.00084 26.3 6.1 48 167-214 36-86 (122)
407 PRK12595 bifunctional 3-deoxy- 55.6 30 0.00065 32.7 5.9 57 165-221 232-299 (360)
408 cd05126 Mth938 Mth938 domain. 55.6 51 0.0011 25.6 6.3 50 167-217 45-94 (117)
409 COG1105 FruK Fructose-1-phosph 54.9 44 0.00096 30.8 6.7 54 165-218 108-168 (310)
410 cd00984 DnaB_C DnaB helicase C 53.8 43 0.00093 29.2 6.5 48 167-214 105-168 (242)
411 TIGR01361 DAHP_synth_Bsub phos 53.2 42 0.00091 30.1 6.3 57 165-221 139-206 (260)
412 cd02072 Glm_B12_BD B12 binding 50.8 53 0.0011 26.0 5.7 52 154-210 28-79 (128)
413 PF13378 MR_MLE_C: Enolase C-t 49.0 24 0.00052 26.7 3.6 50 167-216 4-53 (111)
414 smart00642 Aamy Alpha-amylase 47.4 19 0.00041 29.9 2.9 27 191-217 65-91 (166)
415 TIGR01501 MthylAspMutase methy 46.3 63 0.0014 25.8 5.6 52 154-210 30-81 (134)
416 TIGR00640 acid_CoA_mut_C methy 45.5 81 0.0018 25.0 6.1 52 153-209 30-81 (132)
417 cd02070 corrinoid_protein_B12- 45.0 72 0.0016 27.2 6.2 58 154-216 111-172 (201)
418 TIGR02370 pyl_corrinoid methyl 42.9 93 0.002 26.5 6.6 59 153-216 112-174 (197)
419 smart00481 POLIIIAc DNA polyme 42.4 1E+02 0.0023 20.7 6.2 48 165-214 12-59 (67)
420 cd02069 methionine_synthase_B1 42.2 81 0.0018 27.3 6.1 57 153-214 116-174 (213)
421 PRK08057 cobalt-precorrin-6x r 40.1 63 0.0014 28.8 5.2 22 197-218 53-74 (248)
422 cd00248 Mth938-like Mth938-lik 39.8 1.2E+02 0.0027 23.0 6.2 50 167-217 38-87 (109)
423 cd05560 Xcc1710_like Xcc1710_l 39.0 1.4E+02 0.003 22.8 6.3 49 167-217 39-87 (109)
424 PF00128 Alpha-amylase: Alpha 38.7 21 0.00046 32.2 2.1 28 190-217 46-73 (316)
425 PF02571 CbiJ: Precorrin-6x re 37.7 29 0.00063 30.9 2.7 42 166-213 50-97 (249)
426 PRK09441 cytoplasmic alpha-amy 37.1 29 0.00063 34.2 2.9 28 190-217 75-102 (479)
427 TIGR03569 NeuB_NnaB N-acetylne 37.1 47 0.001 30.9 4.1 90 165-258 140-242 (329)
428 TIGR03586 PseI pseudaminic aci 36.2 1.1E+02 0.0023 28.6 6.3 89 165-258 141-241 (327)
429 TIGR02026 BchE magnesium-proto 36.1 84 0.0018 31.1 5.9 54 166-220 48-103 (497)
430 PF01248 Ribosomal_L7Ae: Ribos 36.0 1.1E+02 0.0024 22.3 5.3 46 170-217 20-66 (95)
431 PF14639 YqgF: Holliday-juncti 35.9 38 0.00082 27.6 2.9 43 167-209 49-91 (150)
432 PRK13602 putative ribosomal pr 35.8 86 0.0019 22.5 4.5 45 170-216 16-60 (82)
433 cd02065 B12-binding_like B12 b 35.5 92 0.002 23.7 5.1 53 167-219 36-90 (125)
434 PRK13601 putative L7Ae-like ri 35.2 96 0.0021 22.4 4.6 45 171-217 14-58 (82)
435 PF02603 Hpr_kinase_N: HPr Ser 34.8 62 0.0013 25.4 3.9 45 167-216 64-112 (127)
436 cd03315 MLE_like Muconate lact 34.7 92 0.002 27.8 5.6 50 166-215 188-237 (265)
437 cd03319 L-Ala-DL-Glu_epimerase 34.4 78 0.0017 29.1 5.2 49 167-215 237-285 (316)
438 COG1087 GalE UDP-glucose 4-epi 33.7 2.5E+02 0.0055 25.9 7.9 96 101-214 3-114 (329)
439 COG1091 RfbD dTDP-4-dehydrorha 33.3 1.1E+02 0.0024 27.8 5.7 48 167-214 36-97 (281)
440 COG1066 Sms Predicted ATP-depe 32.5 94 0.002 29.9 5.2 48 167-214 154-215 (456)
441 COG2099 CobK Precorrin-6x redu 32.0 2.4E+02 0.0051 25.3 7.3 48 165-214 50-98 (257)
442 TIGR00629 uvde UV damage endon 31.2 61 0.0013 29.9 3.7 26 194-219 197-222 (312)
443 PF13727 CoA_binding_3: CoA-bi 31.0 61 0.0013 26.3 3.5 44 169-213 129-172 (175)
444 COG1435 Tdk Thymidine kinase [ 29.9 3.6E+02 0.0078 23.2 8.5 94 107-214 18-115 (201)
445 PF02492 cobW: CobW/HypB/UreG, 29.8 1.2E+02 0.0026 25.1 5.2 102 104-219 10-126 (178)
446 COG2099 CobK Precorrin-6x redu 29.3 1.1E+02 0.0025 27.2 4.9 24 196-219 53-76 (257)
447 PRK02308 uvsE putative UV dama 28.8 1.1E+02 0.0025 28.0 5.2 34 185-220 183-216 (303)
448 PLN00125 Succinyl-CoA ligase [ 28.6 1.3E+02 0.0028 27.6 5.4 47 170-217 83-129 (300)
449 PRK11823 DNA repair protein Ra 28.0 1E+02 0.0022 30.1 4.9 47 168-214 143-203 (446)
450 cd05564 PTS_IIB_chitobiose_lic 27.6 1.1E+02 0.0025 22.6 4.1 54 184-243 2-55 (96)
451 PRK09375 quinolinate synthetas 27.4 3.6E+02 0.0077 25.1 8.0 23 167-190 106-128 (319)
452 PRK13398 3-deoxy-7-phosphohept 27.3 1.1E+02 0.0024 27.5 4.7 57 165-221 141-208 (266)
453 cd00308 enolase_like Enolase-s 27.0 1.5E+02 0.0033 25.7 5.5 49 167-215 154-202 (229)
454 PRK15452 putative protease; Pr 27.0 1.4E+02 0.003 29.1 5.6 50 167-217 42-99 (443)
455 TIGR00381 cdhD CO dehydrogenas 26.9 1.7E+02 0.0037 27.9 5.9 46 167-216 200-247 (389)
456 cd05565 PTS_IIB_lactose PTS_II 26.8 1.4E+02 0.0029 22.5 4.3 54 184-243 3-56 (99)
457 TIGR00649 MG423 conserved hypo 26.7 1.9E+02 0.004 27.9 6.5 106 99-215 288-410 (422)
458 PRK06683 hypothetical protein; 26.5 1.3E+02 0.0029 21.6 4.1 45 171-217 17-61 (82)
459 COG0296 GlgB 1,4-alpha-glucan 26.4 69 0.0015 32.6 3.5 29 190-218 208-236 (628)
460 cd00947 TBP_aldolase_IIB Tagat 25.8 1.2E+02 0.0027 27.4 4.7 45 167-212 79-126 (276)
461 PF13872 AAA_34: P-loop contai 25.6 47 0.001 30.4 2.0 26 196-221 159-185 (303)
462 PRK06806 fructose-bisphosphate 25.4 1.4E+02 0.0031 27.1 5.0 52 167-219 84-138 (281)
463 PF01408 GFO_IDH_MocA: Oxidore 25.3 1.8E+02 0.0038 21.9 5.1 43 170-214 76-118 (120)
464 cd01121 Sms Sms (bacterial rad 25.3 1.3E+02 0.0028 28.6 5.0 47 168-214 145-205 (372)
465 TIGR00789 flhB_rel flhB C-term 25.2 62 0.0013 23.4 2.2 20 198-217 29-48 (82)
466 PLN00196 alpha-amylase; Provis 25.2 60 0.0013 31.5 2.7 28 190-217 86-113 (428)
467 PRK04296 thymidine kinase; Pro 25.0 4.1E+02 0.0089 22.2 9.7 36 181-216 78-113 (190)
468 PRK04452 acetyl-CoA decarbonyl 25.0 1.5E+02 0.0033 27.5 5.2 46 167-216 136-182 (319)
469 TIGR01019 sucCoAalpha succinyl 24.5 1.6E+02 0.0034 26.9 5.2 46 170-217 77-122 (286)
470 PF13481 AAA_25: AAA domain; P 24.5 97 0.0021 25.8 3.7 45 170-214 129-184 (193)
471 COG2877 KdsA 3-deoxy-D-manno-o 24.3 1.2E+02 0.0026 26.8 4.1 39 181-220 159-201 (279)
472 PRK04169 geranylgeranylglycery 24.3 2.1E+02 0.0046 25.2 5.7 53 160-214 13-65 (232)
473 TIGR00196 yjeF_cterm yjeF C-te 24.1 1.4E+02 0.003 26.7 4.8 45 170-217 83-127 (272)
474 KOG3974 Predicted sugar kinase 24.1 1.4E+02 0.0031 26.8 4.5 46 169-217 91-140 (306)
475 PRK01018 50S ribosomal protein 23.8 1.8E+02 0.004 21.7 4.6 42 171-214 22-63 (99)
476 TIGR01060 eno phosphopyruvate 23.7 1.5E+02 0.0032 28.8 5.1 42 170-211 318-359 (425)
477 PF13380 CoA_binding_2: CoA bi 23.5 2.5E+02 0.0054 21.5 5.5 41 171-217 70-110 (116)
478 TIGR02012 tigrfam_recA protein 23.5 1.7E+02 0.0037 27.2 5.2 45 170-214 122-187 (321)
479 PRK08185 hypothetical protein; 23.3 1.4E+02 0.003 27.2 4.6 45 167-212 78-125 (283)
480 COG0163 UbiX 3-polyprenyl-4-hy 23.2 2.3E+02 0.0049 24.0 5.3 64 31-94 117-180 (191)
481 TIGR01769 GGGP geranylgeranylg 23.2 1.7E+02 0.0036 25.3 4.8 39 176-214 19-58 (205)
482 cd03316 MR_like Mandelate race 23.2 1.6E+02 0.0034 27.6 5.2 51 166-216 248-298 (357)
483 TIGR01306 GMP_reduct_2 guanosi 23.1 1.3E+02 0.0028 28.0 4.3 41 170-211 96-138 (321)
484 PRK08057 cobalt-precorrin-6x r 22.7 3.7E+02 0.008 23.9 7.1 46 166-213 49-96 (248)
485 TIGR03677 rpl7ae 50S ribosomal 22.7 2E+02 0.0044 22.2 4.8 46 170-217 31-77 (117)
486 PRK07998 gatY putative fructos 22.6 1.5E+02 0.0032 27.0 4.6 45 167-212 84-131 (283)
487 PF00289 CPSase_L_chain: Carba 22.5 2.2E+02 0.0047 21.8 4.9 45 166-213 59-103 (110)
488 PRK09354 recA recombinase A; P 22.4 1.9E+02 0.004 27.3 5.3 44 171-214 128-192 (349)
489 TIGR01502 B_methylAsp_ase meth 22.4 2.3E+02 0.005 27.4 6.0 51 166-216 305-355 (408)
490 PRK07709 fructose-bisphosphate 22.4 1.5E+02 0.0033 27.0 4.6 45 167-212 87-134 (285)
491 PRK00077 eno enolase; Provisio 22.3 1.8E+02 0.0038 28.2 5.4 44 170-213 317-360 (425)
492 PF02571 CbiJ: Precorrin-6x re 22.3 2.2E+02 0.0047 25.4 5.5 22 197-218 54-75 (249)
493 PRK07315 fructose-bisphosphate 22.2 1.5E+02 0.0033 27.1 4.7 43 169-212 88-133 (293)
494 TIGR00715 precor6x_red precorr 22.2 3.7E+02 0.0081 24.0 7.0 45 166-212 50-95 (256)
495 PRK05678 succinyl-CoA syntheta 22.1 1.9E+02 0.0041 26.5 5.2 46 170-217 79-124 (291)
496 PRK08610 fructose-bisphosphate 22.1 1.5E+02 0.0033 27.0 4.6 45 167-212 87-134 (286)
497 PRK04175 rpl7ae 50S ribosomal 21.9 2.1E+02 0.0045 22.4 4.7 46 170-217 35-81 (122)
498 PLN00191 enolase 21.9 1.9E+02 0.0041 28.4 5.5 45 170-214 349-393 (457)
499 PF14871 GHL6: Hypothetical gl 21.8 3.6E+02 0.0078 21.3 6.2 46 169-214 1-62 (132)
500 PTZ00106 60S ribosomal protein 21.6 1.9E+02 0.004 22.1 4.3 44 170-215 30-73 (108)
No 1
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-59 Score=419.21 Aligned_cols=325 Identities=56% Similarity=0.868 Sum_probs=309.1
Q ss_pred ccccccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q 018318 10 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQT 89 (358)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~ 89 (358)
..+...++++..++.++..|.++.|.|+||+|++++.|++|+.+.+.++|.+|||+.|||+|+++++++|+.+.++.+++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 55677889999999988888889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCC
Q 018318 90 FHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYID 169 (358)
Q Consensus 90 ~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id 169 (358)
||++. ++|.+.||+.||.+++.++++|||+|+-.+..||||++|+. .+.+.|..++.+++++|.+++.+|
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~------~v~~sG~~~~~v~Y~vd~et~~ID 154 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS------PVNFSGKLFNVVSYGVDPETGLID 154 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC------CCCccceeEEeEecccccccCccC
Confidence 99998 57999999999999999999999999999999999999983 566788778899999998889999
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCC
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGP 249 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~ 249 (358)
+|++++++++++||+|+++.|.++...|.+++.++|++.|+++++|.||.+|++..+.+++|+..+|++++|+||+|.||
T Consensus 155 yD~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGP 234 (413)
T COG0112 155 YDEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGP 234 (413)
T ss_pred HHHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 018318 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (358)
Q Consensus 250 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (358)
|||+|+++++ ++.+++++..||+.+|+|..+.+|+.+.|+.+.++.+|.+|.+++.+|++.|++.|
T Consensus 235 rGG~Il~~~e--------------el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l 300 (413)
T COG0112 235 RGGIILTNDE--------------ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEAL 300 (413)
T ss_pred CceEEEeccH--------------HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 9999999985 78899999999999999999999999999999998899999999999999999999
Q ss_pred hhCCceeeeCCCcceEEEEEcCCCCCCCC
Q 018318 330 TGKGYSLVTGGTENHLVLWDLRPLGLTGK 358 (358)
Q Consensus 330 ~~~G~~~~~~~~~~~~~~v~~~~~~~~~~ 358 (358)
.++|+++..+++++|++.||+++.|++||
T Consensus 301 ~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk 329 (413)
T COG0112 301 KERGFKVVSGGTDNHLVLVDLRSKGLTGK 329 (413)
T ss_pred HHcCCeEecCCccceEEEEEcccCCCCHH
Confidence 99999999988999999999998888886
No 2
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-59 Score=410.36 Aligned_cols=353 Identities=74% Similarity=1.144 Sum_probs=331.7
Q ss_pred cchhhcccccccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHH
Q 018318 4 VNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCR 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~ 83 (358)
+-.|++.+++..||++.++++.++.|.+++|.||||+|+.+.+|++|+..++.++|.+||||.|||+|.++++++|..++
T Consensus 13 ~~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq 92 (477)
T KOG2467|consen 13 VIKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQ 92 (477)
T ss_pred hhhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC
Q 018318 84 SRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS 163 (358)
Q Consensus 84 ~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 163 (358)
++.-+.|+++++.||++|.+-||+-||+.+..++++|+|+|+-++..+|||++|+|++.. +.++.....++..|+.+++
T Consensus 93 ~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~-kkISa~SiyFeSmPYkv~~ 171 (477)
T KOG2467|consen 93 KRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPT-KKISATSIYFESMPYKVDP 171 (477)
T ss_pred HHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCC-ceeeeeeeecccCceeeCC
Confidence 999999999999999999999999999999999999999999999999999999998876 6666666777778899998
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCC
Q 018318 164 STGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH 243 (358)
Q Consensus 164 ~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~ 243 (358)
.+|.||+|.||+.....+||+++++.|.++..+|.+++.+||.+.|+++++|.||.+|++..+..++||+++|++++++|
T Consensus 172 ~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTH 251 (477)
T KOG2467|consen 172 STGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTH 251 (477)
T ss_pred CCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccc
Confidence 89999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCeeEEEEeCCCCCCC-CCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 018318 244 KSLRGPRAGMIFYRKGPKPPK-KGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANA 322 (358)
Q Consensus 244 K~l~g~~gG~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 322 (358)
|.|.|||||+|+.++.....+ +.++.+. |++.++|....||+++|+|.++.|++++.||++....+|.+|.+++.+|+
T Consensus 252 KsLRGPRg~mIFyRkGvk~~~~k~g~~i~-ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Na 330 (477)
T KOG2467|consen 252 KSLRGPRGAMIFYRKGVKSIKPKQGKEIL-YDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNA 330 (477)
T ss_pred ccccCCcceeEEEeccCCcCCCCCCCcce-echhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 999999999999999876665 3455543 58999999999999999999999999999999999899999999999999
Q ss_pred HHHHHHHhhCCceeeeCCCcceEEEEEcCCCCCCCC
Q 018318 323 VALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGK 358 (358)
Q Consensus 323 ~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~~~~~~~ 358 (358)
+.|++.|.++|+++..+++++|+++||+++.|++|+
T Consensus 331 kala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGa 366 (477)
T KOG2467|consen 331 KALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGA 366 (477)
T ss_pred HHHHHHHHHcCceEecCCccceEEEEeccccCCchH
Confidence 999999999999999988999999999999999984
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=2.2e-57 Score=431.33 Aligned_cols=355 Identities=72% Similarity=1.223 Sum_probs=320.0
Q ss_pred ccchhhcccccccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHH
Q 018318 3 PVNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLC 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~ 82 (358)
+++.|++.+++..|+++..++.++..|.+++|.|+||+|++++.|++++...+.++|.+|+++.|||.|.++++++|..+
T Consensus 120 ~~~~~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la 199 (586)
T PLN02271 120 AVRAWGNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLC 199 (586)
T ss_pred HHHHHHhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHH
Confidence 56789999999999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccC
Q 018318 83 RSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN 162 (358)
Q Consensus 83 ~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 162 (358)
.++++++||+++++||+.|.+.||+.||.+++.++++|||+|+..+.+|++|++++++...+..+...|..++.++|+++
T Consensus 200 ~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d 279 (586)
T PLN02271 200 CERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVN 279 (586)
T ss_pred HHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccc
Confidence 99999999999988889999999999999999999999999999999999999988654322345667877888898887
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecC
Q 018318 163 SSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTT 242 (358)
Q Consensus 163 ~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~ 242 (358)
.+++.+|+|++++.+.+.+||+|+++.+.++...|+++|.++|+++|+++++|+||.+|++..+.++.|+.++|++++|+
T Consensus 280 ~~~g~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TT 359 (586)
T PLN02271 280 PQTGYIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTT 359 (586)
T ss_pred cccCccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCC
Confidence 67899999999997767799999999999998899999999999999999999999999999888888888999999999
Q ss_pred CccCCCCCeeEEEEeCCCCCCCCCC------CCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHH
Q 018318 243 HKSLRGPRAGMIFYRKGPKPPKKGQ------PEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAK 316 (358)
Q Consensus 243 ~K~l~g~~gG~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~ 316 (358)
||||.||+||+++++++......++ ..+ .+++.++++...||++++++.++.+++++++++++...+|.+|.+
T Consensus 360 HKtLrGPrGG~I~~r~~~~~~~~g~~gs~s~~~~-~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~ 438 (586)
T PLN02271 360 HKSLRGPRGGIIFYRKGPKLRKQGMLLSHGDDNS-HYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQ 438 (586)
T ss_pred cccCCCCCceEEEecccccccccCCccccccccc-cHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHH
Confidence 9999999999999977644322221 111 135778899999999999999999999999999988788999999
Q ss_pred HHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCCCCCCCC
Q 018318 317 QVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGK 358 (358)
Q Consensus 317 ~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~~~~~~~ 358 (358)
++.+|++.|++.|.+.||++..+++++|+++||+++.|++|+
T Consensus 439 QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~ 480 (586)
T PLN02271 439 QVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGK 480 (586)
T ss_pred HHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHH
Confidence 999999999999999999999988999999999999998874
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=2.1e-56 Score=415.48 Aligned_cols=345 Identities=57% Similarity=0.924 Sum_probs=276.2
Q ss_pred ccccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC
Q 018318 12 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH 91 (358)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g 91 (358)
|+..|+++..+++++..|.+++|.|+|++|+++|.|++++...+.++|.+|+++.|||.|.++++++|+.+.++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 34578999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHH
Q 018318 92 LDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYD 171 (358)
Q Consensus 92 ~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~ 171 (358)
+++.+|.+.|.+.||+.||.+++.++++|||+|+..+..+|||++++..... +.+...+..++.+++++|++++.+|+|
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~-~~~~~~~~~~~~~~y~~d~~~~~ID~d 159 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNF-KKISASGLYFESVPYPVDPDTGLIDYD 159 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSH-SBSSHHHHHSEEEEEEB-TTTSSB-HH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccc-cccccccceEEEEeeeeecCCCeECHH
Confidence 9988888999999999999999999999999999999999999998864321 122335666788888888778999999
Q ss_pred HHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe
Q 018318 172 KLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA 251 (358)
Q Consensus 172 ~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g 251 (358)
++++++++++||+|+++.|.++...|++++.+||++.|+++++|.+|.+|++..+.+++|+.++|++++|+||+|.||+|
T Consensus 160 ~l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrg 239 (399)
T PF00464_consen 160 ELEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRG 239 (399)
T ss_dssp HHHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-
T ss_pred HHHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 252 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
|+|++++....+++.++.+. +++.++++...||+.++++..+.+++++.++.+....++.+|.+++.+|++.|++.|.+
T Consensus 240 giI~~~~~~~~~~~~~~~~~-~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~ 318 (399)
T PF00464_consen 240 GIILTNKGSKNVDKKGKEID-EELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE 318 (399)
T ss_dssp EEEEES-SEEEE-TTS-EEE-HHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCccccCCcccccH-HHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999954333333333221 26889999999999999999999999999999988778899999999999999999999
Q ss_pred CCceeeeCCCcceEEEEEcCCCCCCCC
Q 018318 332 KGYSLVTGGTENHLVLWDLRPLGLTGK 358 (358)
Q Consensus 332 ~G~~~~~~~~~~~~~~v~~~~~~~~~~ 358 (358)
.|+++..+.+++|++|||+++.|++|+
T Consensus 319 ~G~~v~~ggTd~H~vlvd~~~~~~~g~ 345 (399)
T PF00464_consen 319 RGFKVVTGGTDNHQVLVDLRSFGIDGK 345 (399)
T ss_dssp TT-EEGGGS-SSSEEEEEGGGGTS-HH
T ss_pred CCcEEEECCCCCCeEEEEecccccchH
Confidence 999999878999999999999888763
No 5
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=4.2e-48 Score=373.57 Aligned_cols=352 Identities=79% Similarity=1.292 Sum_probs=296.2
Q ss_pred cchhhcccccccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHH
Q 018318 4 VNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCR 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~ 83 (358)
+..|+...++..||++..++.++..|.++.|.|+||+|++++.|++++...+.++|+.|++++||++|.+..+++|+.++
T Consensus 7 ~~~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~ 86 (475)
T PLN03226 7 VPKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQ 86 (475)
T ss_pred hhhcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHH
Confidence 45577788888999999999998888999999999999999999999999998999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC
Q 018318 84 SRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS 163 (358)
Q Consensus 84 ~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 163 (358)
++.+++|+.+.+.|++.+.++||+.||..++.++++|||+|++.+..+++|+++++... +..+...+..+..+++.++.
T Consensus 87 ~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~-g~~~s~~~~~~~~~~y~~~~ 165 (475)
T PLN03226 87 KRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTD-GKKISATSIYFESMPYRLDE 165 (475)
T ss_pred HHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhc-ccccccceEEEEeeeeeecC
Confidence 99999999988666556777999999999999999999999998888899998775321 11222334444555677766
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCC
Q 018318 164 STGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH 243 (358)
Q Consensus 164 ~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~ 243 (358)
+++.+|++++++++++++|++|+++.+.++...|+++|.++|+++|+++++|+||++|++..+..+.+++++|++++|+|
T Consensus 166 ~~g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~h 245 (475)
T PLN03226 166 STGLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTH 245 (475)
T ss_pred CCCCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCc
Confidence 67899999999999877899887767789999999999999999999999999999999887766666779999999999
Q ss_pred ccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 018318 244 KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAV 323 (358)
Q Consensus 244 K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 323 (358)
|||.||+||+++++++..+...++... ++++...++...++..+++++++.++++++|++++...+++++.+++.+|++
T Consensus 246 K~L~GP~Gg~I~~~~~~~~~~~~g~~~-~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~ 324 (475)
T PLN03226 246 KSLRGPRGGMIFFRKGPKPPKGQGEGA-VYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAA 324 (475)
T ss_pred ccccCCCceEEEEchhhcccccCCCcc-HHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence 999999999999977643322222111 1234445565667777888889999999999999876677889999999999
Q ss_pred HHHHHHhhCCceeeeCCCcceEEEEEcCCCCCCC
Q 018318 324 ALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTG 357 (358)
Q Consensus 324 ~l~~~L~~~G~~~~~~~~~~~~~~v~~~~~~~~~ 357 (358)
+|++.|.+.|++++.+..++|+++||+++.|+++
T Consensus 325 ~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~ 358 (475)
T PLN03226 325 ALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTG 358 (475)
T ss_pred HHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCH
Confidence 9999999999999876577999999999888765
No 6
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=7.5e-48 Score=365.50 Aligned_cols=321 Identities=44% Similarity=0.739 Sum_probs=282.0
Q ss_pred ccccccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q 018318 10 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQT 89 (358)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~ 89 (358)
+.++..|+++..+++++..|.++.|.|+||+|++++.|++++...+.++|.+|+++.+||.|.++++++|..+.++++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 34677899999999999899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccccCChHHHHHHHHhhcCC-------------------------------CCeEEEecCCCCcccccc
Q 018318 90 FHLDPTQWGVNVQPYSGSPANFAAYTAVLEP-------------------------------HDRIMGLDLPSGGHLTHG 138 (358)
Q Consensus 90 ~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~-------------------------------gd~Vl~~~~~~~~~~~~~ 138 (358)
||+++ +.|.+.||+.||..++.++++| ||+|+..+..+|+|++++
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99998 5799999999999999999987 899999999999999988
Q ss_pred ccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechh
Q 018318 139 YYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAH 218 (358)
Q Consensus 139 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~ 218 (358)
+ .....+..+..++++++.+++.+|++++++++.+.+|++++++.++++...|+++|.++|++||+++++|+||
T Consensus 184 ~------~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH 257 (493)
T PRK13580 184 F------RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAH 257 (493)
T ss_pred c------ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECch
Confidence 5 2344565567778888766789999999999988777777777788888889999999999999999999999
Q ss_pred hhhhhhccccC---CCCCcccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 219 ISGLVAAQEAA---NPFEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 219 ~~g~~~~~~~~---~~~~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
++|++..+..+ .++.++|++++|+||+|.||+||++++++ ++.+.++.. .|+++|++.++.
T Consensus 258 ~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~---------------~l~~~L~~a-~P~i~gg~l~p~ 321 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK---------------EYADAVDKG-CPLVLGGPLPHV 321 (493)
T ss_pred hhceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH---------------HHHHHHhhC-CCcccCCCccHH
Confidence 99998755433 34458999999999999999999999987 466667554 477888899999
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCCCCCC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLT 356 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~~~~~ 356 (358)
+++.+.++.++...++.++++++.+|+++|++.|.+.||++..+.+++|+++|++...+++
T Consensus 322 iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~ 382 (493)
T PRK13580 322 MAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLT 382 (493)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHH
Confidence 9998888888765567789999999999999999999999875457899999999876544
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=6.5e-43 Score=338.49 Aligned_cols=335 Identities=71% Similarity=1.150 Sum_probs=272.0
Q ss_pred cccccccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQ 88 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~ 88 (358)
++.+++.|+++..++.++..+.+++|.|+|++|+++|.|++++...+..+|+.|+++++|+.|.+..+.+|+.+++++++
T Consensus 12 ~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~ 91 (452)
T PTZ00094 12 NQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALE 91 (452)
T ss_pred hhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHH
Confidence 34477889999999988877888999999999999999999999999999988999999999999999999778999999
Q ss_pred hcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCC
Q 018318 89 TFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYI 168 (358)
Q Consensus 89 ~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 168 (358)
+||+++++|...+.++||+.||.+++.++++|||+|++...+|+++++.+..... ......+..+...+++++. ++.+
T Consensus 92 lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~-~~~~~~~~~~~~~~~~~~~-~g~i 169 (452)
T PTZ00094 92 AFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAK-KKVSATSIYFESLPYQVNE-KGLI 169 (452)
T ss_pred HhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccc-cccccceeeeeeeecccCC-CCCc
Confidence 9999876543345567899999999999999999999999999998865421100 0011123334455565553 5899
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCC
Q 018318 169 DYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRG 248 (358)
Q Consensus 169 d~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g 248 (358)
|++++++++++.++++|+++.+.+|...|+++|.++||++|+++++|++|+.|++..+..+.++.++|++++|+||||+|
T Consensus 170 d~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~G 249 (452)
T PTZ00094 170 DYDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRG 249 (452)
T ss_pred CHHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCC
Confidence 99999999976678888876778999999999999999999999999999999887654445556899999999999999
Q ss_pred CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 018318 249 PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNY 328 (358)
Q Consensus 249 ~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (358)
|+||+++++++... .+...+....++.+.|+++...++++++|++.+...+++++.+++.+++++|++.
T Consensus 250 P~Gg~l~~~~~~~~-----------~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~ 318 (452)
T PTZ00094 250 PRSGLIFYRKKVKP-----------DIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAA 318 (452)
T ss_pred CCceEEEEecccch-----------HHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 99999999764210 2333444445566677888899999999999886666788899999999999999
Q ss_pred HhhCCceeeeCCCcceEEEEEcCCCCCC
Q 018318 329 LTGKGYSLVTGGTENHLVLWDLRPLGLT 356 (358)
Q Consensus 329 L~~~G~~~~~~~~~~~~~~v~~~~~~~~ 356 (358)
|.+.|+++..+...+|+.+|++...|++
T Consensus 319 L~~~g~~v~~~~~~~~~~~v~~~~~~~~ 346 (452)
T PTZ00094 319 LEKRGYDLVTGGTDNHLVLVDLRPFGIT 346 (452)
T ss_pred HHhCCcEEecCCCCCceEeecCCcCCCC
Confidence 9988999876434468888888776655
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=3.2e-41 Score=322.92 Aligned_cols=325 Identities=59% Similarity=0.886 Sum_probs=265.3
Q ss_pred hhcccccccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 018318 7 WGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRA 86 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~l 86 (358)
+-++.++..|+++..+++++..+.++.++|++++|+++|+|++++...+.++|+.|+++++++.|.+.+.+||+.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence 35678889999999999998888899999999999999999999999987889999999999999999999997677899
Q ss_pred HHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCC
Q 018318 87 LQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG 166 (358)
Q Consensus 87 a~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 166 (358)
++++|.+. +.+.++||+.||.+++.++++|||+|+++...|++++..+. .....+..+...+++++..++
T Consensus 84 a~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~ 153 (416)
T PRK13034 84 KQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA------KVSLSGKWYNAVQYGVDRLTG 153 (416)
T ss_pred HHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC------cceeccceeeeEEcccccccC
Confidence 99999987 44556899999999999999999999999998887553331 112223323334566655567
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccC
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSL 246 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l 246 (358)
.+|++++++++++.++++|+++.+.+|...|+++|.++|++||+++++|+||+.|..+.+....+++++|++++|+||+|
T Consensus 154 ~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l 233 (416)
T PRK13034 154 LIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTL 233 (416)
T ss_pred CcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccC
Confidence 89999999998766789888877778988999999999999999999999999998877655555568999999999999
Q ss_pred CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 018318 247 RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALG 326 (358)
Q Consensus 247 ~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~ 326 (358)
+||.||+++++++ .+.++++...++++++++..+.++++..++......+..++.+++++|+++|+
T Consensus 234 ~g~~GG~v~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~ 299 (416)
T PRK13034 234 RGPRGGMILTNDE--------------EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALA 299 (416)
T ss_pred CCCCCeEEEECcH--------------HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH
Confidence 8999999988774 45555555556655556666677776767766554445677899999999999
Q ss_pred HHHhhCCceeeeCCCcceEEEEEcCCCCC
Q 018318 327 NYLTGKGYSLVTGGTENHLVLWDLRPLGL 355 (358)
Q Consensus 327 ~~L~~~G~~~~~~~~~~~~~~v~~~~~~~ 355 (358)
+.|.+.|+++..+.+++|+++|++...+.
T Consensus 300 ~~L~~~G~~~~~~~~~t~i~~v~~~~~~~ 328 (416)
T PRK13034 300 EVLKERGYDLVSGGTDNHLLLVDLRPKGL 328 (416)
T ss_pred HHHHHcCCEeccCCCCCcEEEEEcCCCCC
Confidence 99999999986433689999999876554
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=8.4e-39 Score=307.76 Aligned_cols=321 Identities=54% Similarity=0.847 Sum_probs=256.6
Q ss_pred ccccccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q 018318 10 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQT 89 (358)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~ 89 (358)
++|+..|++++++++++.++.++.+.|+++++++|+.|++++...+..+++.|+++++++.+.+..+.+|+.++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~ 83 (416)
T PRK00011 4 DNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKEL 83 (416)
T ss_pred hhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 56788999999999988788899999999999999999999988877777778888888888888889987788899999
Q ss_pred cCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCC
Q 018318 90 FHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYID 169 (358)
Q Consensus 90 ~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id 169 (358)
+|++.. .|.+++||.|+..++.++++|||+|+++.++|+++++.+. .....+.+.+++.++++.+++.+|
T Consensus 84 ~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~d 153 (416)
T PRK00011 84 FGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGS------PVNFSGKLYNVVSYGVDEETGLID 153 (416)
T ss_pred hCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCcccccc------ccccccceeeEeecCcCcccCCcC
Confidence 999873 3556789999999999999999999999999987764432 112223334555666554467899
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCC
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGP 249 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~ 249 (358)
+++++++++++++++|+++.+++|...|+++|.++|++||+++++|++|+.|+.+.+..+.+++++|++++|+||+|+||
T Consensus 154 ~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~ 233 (416)
T PRK00011 154 YDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGP 233 (416)
T ss_pred HHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCC
Confidence 99999999766789988877788877899999999999999999999999887655434444457899999999999999
Q ss_pred CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 018318 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (358)
Q Consensus 250 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (358)
+||+++++++ ++.+.+.....++..+++....++++..++......+++++++++.++++++++.|
T Consensus 234 ~gg~i~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 299 (416)
T PRK00011 234 RGGLILTNDE--------------ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEAL 299 (416)
T ss_pred CceEEEeCCH--------------HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999764 46666655444544455566667776667666554456788999999999999999
Q ss_pred hhCCceeeeCCCcceEEEEEcCCCC
Q 018318 330 TGKGYSLVTGGTENHLVLWDLRPLG 354 (358)
Q Consensus 330 ~~~G~~~~~~~~~~~~~~v~~~~~~ 354 (358)
.+.|+++......++++|+++.+.+
T Consensus 300 ~~~g~~~~~~~~~~~~~~i~~~~~~ 324 (416)
T PRK00011 300 AERGFRVVSGGTDNHLVLVDLRSKG 324 (416)
T ss_pred HhCCCeeeecCCCCeEEEEeCcccC
Confidence 9999988643345699999986544
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=1.4e-38 Score=305.06 Aligned_cols=321 Identities=62% Similarity=0.965 Sum_probs=256.0
Q ss_pred ccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC
Q 018318 14 TVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD 93 (358)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~ 93 (358)
.+|++.+.+++++..+.++++.|++++++++|.|++++..++..+++.|+++++++.+.+....+|+.+++++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 46889999998876777899999999999999999999988877888889998988888998899877888899999998
Q ss_pred CCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHH
Q 018318 94 PTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKL 173 (358)
Q Consensus 94 ~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l 173 (358)
.. .+++++|++|+..++.++++|||+|++.+++|+++++.+... .+...|..+..++++.+.+++.+|++++
T Consensus 82 ~~----~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~id~~~l 153 (402)
T cd00378 82 YA----NVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT----KVSASGKLFESVPYGVDPETGLIDYDAL 153 (402)
T ss_pred ce----eeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc----cccccceeEEEecCCcCcccCCcCHHHH
Confidence 63 466678999999999999999999999999998876543210 1334565445555544322678999999
Q ss_pred HHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCeeE
Q 018318 174 EEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGM 253 (358)
Q Consensus 174 ~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~gG~ 253 (358)
++++.++++++|+++++++|...|+++|.++|++||+++++|++|+.|+.+.+..+.++.++|++++|+||+|+||+||+
T Consensus 154 ~~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~ 233 (402)
T cd00378 154 EKMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGL 233 (402)
T ss_pred HHHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceE
Confidence 99997667899988888889888999999999999999999999988877655434444478999999999999999999
Q ss_pred EEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
++++++ ++.+.+.....++..+++....+++++.++......++.++++++.++++++++.|.+.|
T Consensus 234 i~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 299 (402)
T cd00378 234 ILTRKG--------------ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERG 299 (402)
T ss_pred EEeccH--------------HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999874 455555544444445555556666667777665433567788899999999999999999
Q ss_pred ceeeeCCCcceEEEEEcCCCCCC
Q 018318 334 YSLVTGGTENHLVLWDLRPLGLT 356 (358)
Q Consensus 334 ~~~~~~~~~~~~~~v~~~~~~~~ 356 (358)
+++...+..++.+|+++.+.+.+
T Consensus 300 ~~~~~~~~~~~~v~v~~~~~~~~ 322 (402)
T cd00378 300 FKVVSGGTDNHLVLVDLRPKGIT 322 (402)
T ss_pred CeEeecCCCCeEEEEeCCccCCC
Confidence 98875456799999999765543
No 11
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=4.3e-29 Score=236.39 Aligned_cols=286 Identities=19% Similarity=0.175 Sum_probs=206.6
Q ss_pred eEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCC-CCCCccccccCC-hHHHHH
Q 018318 35 ELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDP-TQWGVNVQPYSG-SPANFA 112 (358)
Q Consensus 35 ~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~-~~~~~~v~~~sG-t~a~~~ 112 (358)
...+..+..|+.|++++..++...+.+...+ .+..+....+ ..+++|+.+++++|+++ ++ |+++.| |+++..
T Consensus 26 lD~aa~~~~p~~V~~a~~~~~~~~~an~~r~-~~~~~~~~t~-~~e~aRe~va~~~~a~~~~e----Ivft~~tT~aln~ 99 (405)
T COG0520 26 LDNAATSQKPQAVLDAVAEYYRRYNANVHRG-AHTLAEEATD-LYEAAREAVARFLNADSSDE----IVFTRGTTEALNL 99 (405)
T ss_pred ecCcccccCCHHHHHHHHHHHHhhcCCcCcc-cchHHHHHHH-HHHHHHHHHHHHhCCCCCCe----EEEeCChhHHHHH
Confidence 3345666789999999998775444322222 2222323333 44588999999999995 42 445555 579999
Q ss_pred HHHhh---cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 113 AYTAV---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 113 ~l~a~---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
+..++ +++||+|++...+|+++...+. ...+..|..+..+++ + +++.+|.|+++.++.+ +||+|.+++
T Consensus 100 va~~l~~~~~~gdeIv~s~~EH~sn~~pw~-----~~~~~~Ga~v~~i~~--~-~~g~~~~~~~~~~i~~-~Tklvais~ 170 (405)
T COG0520 100 VARGLGRSLKPGDEIVVSDLEHHSNIVPWQ-----ELAKRTGAKVRVIPL--D-DDGLLDLDALEKLITP-KTKLVALSH 170 (405)
T ss_pred HHHHhhhhhcCCCEEEEccCcchhhHHHHH-----HHHHhcCcEEEEEec--C-CCCCcCHHHHHHhcCC-CceEEEEEC
Confidence 98888 6999999999999998774432 111234655554444 4 5789999999998865 899998876
Q ss_pred CC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC-C
Q 018318 190 SA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-P 263 (358)
Q Consensus 190 ~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~ 263 (358)
.+ .|...|+++|+++||++|++++||++|+.|+. +.+++ ++|++++|+||||.||.| |+++++++..+ +
T Consensus 171 vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~-----~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l 245 (405)
T COG0520 171 VSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHL-----PIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEEL 245 (405)
T ss_pred ccccccccchHHHHHHHHHHcCCEEEEECccccCcc-----CCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhc
Confidence 43 56789999999999999999999999998875 34554 899999999999999988 99999987542 3
Q ss_pred C---CCCCCCccccHHH--HhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceee
Q 018318 264 K---KGQPEGAVYDFED--KINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLV 337 (358)
Q Consensus 264 ~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~ 337 (358)
. .++..+......+ ........+..|++++....++.+|++.+...++..+.++.+++.+++.+.|+++ +++++
T Consensus 246 ~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~ 325 (405)
T COG0520 246 EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIY 325 (405)
T ss_pred CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 2 2343332100000 0111111223477888888889999999877777899999999999999999997 79998
Q ss_pred eCC
Q 018318 338 TGG 340 (358)
Q Consensus 338 ~~~ 340 (358)
.++
T Consensus 326 g~~ 328 (405)
T COG0520 326 GPP 328 (405)
T ss_pred cCC
Confidence 744
No 12
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.97 E-value=1.2e-28 Score=221.54 Aligned_cols=287 Identities=21% Similarity=0.258 Sum_probs=215.6
Q ss_pred cceeEe-ccCCCC-CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCC-CCCCccccccCCh-
Q 018318 32 RGIELI-ASENFT-SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDP-TQWGVNVQPYSGS- 107 (358)
Q Consensus 32 ~~~~l~-a~~~~~-~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~-~~~~~~v~~~sGt- 107 (358)
+.+.|. |.+++. ||.|++|+.+.+.+. ..||+.. + +++-+.+..|.++.++.+. +++ ++++.|-
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~~~-----~---~~~~~ai~~w~~~r~~~~i~~e~---i~~~p~VV 93 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYPYG-----S---DELYAAIAHWFKQRHQWEIKPEW---IVFVPGVV 93 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCCCC-----C---HHHHHHHHHHHHHhcCCCCCcce---EEEcCcch
Confidence 557777 467764 999999999988754 2467631 1 2344566799999999876 444 5566664
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 108 ~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
.++..++.++.+|||.|++.+|.|.+++ ..+...|+++...++..++..+.+|+++||+++.+.+++++++
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~---------~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iL 164 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPFY---------NAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFIL 164 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHHH---------HHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEE
Confidence 5999999999999999999999998765 2445677766556665443345789999999998877899999
Q ss_pred cCCCCC--Cc---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C--ccc--EEEecCCccC--CCCCeeE
Q 018318 188 GGSAYP--RD---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E--YCH--IVTTTTHKSL--RGPRAGM 253 (358)
Q Consensus 188 ~~~~~~--~~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~--~~d--~~~~s~~K~l--~g~~gG~ 253 (358)
|+|+|| .+ ..|++|++||++||+.||+|+.|+ .++..+....++ + .+| +.+.|++|+| +|.+++.
T Consensus 165 CnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHa-Dlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~ 243 (388)
T COG1168 165 CNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHA-DLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAY 243 (388)
T ss_pred eCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccc-cccccCCCccchhhcChhhhcceEEEeeccccccchhhhhee
Confidence 999988 33 468999999999999999999996 666665333333 2 334 7788899986 6778888
Q ss_pred EEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHhhC
Q 018318 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF-KAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++.+++ +++.+..+.......++++...+.|..+|++.- +.| .+..+.+.+|++++.+.|.+.
T Consensus 244 ~Ii~n~--------------~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G--~~WLd~L~~yl~~N~~~~~~~l~~~ 307 (388)
T COG1168 244 IIISNR--------------ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG--EPWLDELLEYLKDNRDYVADFLNKH 307 (388)
T ss_pred EEecCH--------------HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888775 454443333223335667777777777777753 344 677788999999999999987
Q ss_pred --CceeeeCCCcceEEEEEcCCCCCCC
Q 018318 333 --GYSLVTGGTENHLVLWDLRPLGLTG 357 (358)
Q Consensus 333 --G~~~~~~~~~~~~~~v~~~~~~~~~ 357 (358)
++++.. ++.|++.|+||+++|+++
T Consensus 308 ~P~v~v~~-p~gTYL~WLD~r~l~l~d 333 (388)
T COG1168 308 LPGVKVTE-PQGTYLAWLDCRELGLDD 333 (388)
T ss_pred CCCcEEec-CCCceeeeeeccccCCCh
Confidence 899875 789999999999999985
No 13
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.5e-28 Score=225.18 Aligned_cols=296 Identities=17% Similarity=0.118 Sum_probs=216.8
Q ss_pred ceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHH
Q 018318 33 GIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (358)
Q Consensus 33 ~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~ 112 (358)
.+.|+++++.++++|++||...+..++. .++...+ +++.+.++.+|+++... +.++..|||.|+++
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~s-----------~~F~~~~-~~~~~~L~~v~~t~~~~--~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHRS-----------PDFVGIM-KEVLEKLRKVFGTENGD--VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCCC-----------HHHHHHH-HHHHHHHHHHhcCCCCc--EEEEcCCcHHHHHH
Confidence 4789999999999999999887765441 2455455 46779999999998422 45777889999999
Q ss_pred HHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-CCcEEEEcC--
Q 018318 113 AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-RPKLIICGG-- 189 (358)
Q Consensus 113 ~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~-~~~~v~~~~-- 189 (358)
++.++++|||+|++... |.|...+. ..++..|..+..+..+ ..-.+|+++++++|+++ ..++|.+.+
T Consensus 72 av~sl~~pgdkVLv~~n---G~FG~R~~----~ia~~~g~~v~~~~~~---wg~~v~p~~v~~~L~~~~~~~~V~~vH~E 141 (383)
T COG0075 72 AVASLVEPGDKVLVVVN---GKFGERFA----EIAERYGAEVVVLEVE---WGEAVDPEEVEEALDKDPDIKAVAVVHNE 141 (383)
T ss_pred HHHhccCCCCeEEEEeC---ChHHHHHH----HHHHHhCCceEEEeCC---CCCCCCHHHHHHHHhcCCCccEEEEEecc
Confidence 99999999999998873 43333221 1234566655555443 23479999999999854 356776654
Q ss_pred CCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCC-CCCC
Q 018318 190 SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK-PPKK 265 (358)
Q Consensus 190 ~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~-~~~~ 265 (358)
+++|...|+++|+++|++||+++|||+..++|.. +..++ ++|+++.+++|+|.+|+| |++..+++.. .+..
T Consensus 142 TSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~-----~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~ 216 (383)
T COG0075 142 TSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGE-----PLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEE 216 (383)
T ss_pred CcccccCcHHHHHHHHHHcCCEEEEEecccCCCc-----ccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhc
Confidence 4566778999999999999999999998776643 23444 899999999999999999 8888876432 1211
Q ss_pred CCCCCccccHHHHhhhhcC-CCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCC-Ccc
Q 018318 266 GQPEGAVYDFEDKINFAVF-PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG-TEN 343 (358)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~-~~~ 343 (358)
.....+..++....+.... ..+..+|..+.+.++..||+.++.++++++.+|++++++.+++.++++||+++..+ ...
T Consensus 217 ~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s 296 (383)
T COG0075 217 RKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRS 296 (383)
T ss_pred CCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCC
Confidence 1111011134333322111 22334678889999999999998888999999999999999999999999998732 456
Q ss_pred eEEEEEcCCCCCCC
Q 018318 344 HLVLWDLRPLGLTG 357 (358)
Q Consensus 344 ~~~~v~~~~~~~~~ 357 (358)
+.++.-..|.|+++
T Consensus 297 ~tvta~~~P~g~~~ 310 (383)
T COG0075 297 PTVTAIKVPEGVDD 310 (383)
T ss_pred CceEEEECCCCCCc
Confidence 67788778888775
No 14
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=1.2e-28 Score=225.58 Aligned_cols=267 Identities=18% Similarity=0.194 Sum_probs=200.7
Q ss_pred EeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHH
Q 018318 36 LIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT 115 (358)
Q Consensus 36 l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~ 115 (358)
.++..+++.|+|+++|..++...| |+|++-|..|.+....+| ++|+++|+++|+++.+ ++++++||+++++++.
T Consensus 6 D~~ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve-~AR~~iA~llga~~~e---IiFTSG~TEsnNlaI~ 79 (386)
T COG1104 6 DNAATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVE-EAREQIAKLLGADPEE---IIFTSGATESNNLAIK 79 (386)
T ss_pred cccccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHH-HHHHHHHHHhCCCCCe---EEEecCCcHHHHHHHH
Confidence 346778899999999999988775 788888888888888887 6899999999999853 3555667899998887
Q ss_pred hh---c---CCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc-
Q 018318 116 AV---L---EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG- 188 (358)
Q Consensus 116 a~---~---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~- 188 (358)
.. . +.|.+|+++..+|.+.+... +.++..|. ++.+++++ .+|.+|+++|+++|++ ++.+|.+-
T Consensus 80 g~~~a~~~~~~~~HIIts~iEH~aVl~~~------~~Le~~g~--~Vtyl~V~-~~G~v~~e~L~~al~~-~T~LVSim~ 149 (386)
T COG1104 80 GAALAYRNAQKGKHIITSAIEHPAVLNTC------RYLERQGF--EVTYLPVD-SNGLVDLEQLEEALRP-DTILVSIMH 149 (386)
T ss_pred hhHHhhhcccCCCeEEEcccccHHHHHHH------HHHHhcCC--eEEEeCCC-CCCeEcHHHHHHhcCC-CceEEEEEe
Confidence 63 1 25789999999998766322 11222354 44555555 3899999999999985 67777654
Q ss_pred -CCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCC--C
Q 018318 189 -GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK--P 262 (358)
Q Consensus 189 -~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~--~ 262 (358)
++..|+++|+++|+++|+++|+++++|++|+.|-+ +.++. ++|++++|.|| |+||+| |+++.++... .
T Consensus 150 aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gki-----pi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~~~~p 223 (386)
T COG1104 150 ANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKI-----PIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGVRLEP 223 (386)
T ss_pred cccCeeecccHHHHHHHHHHcCCeEEEehhhhcCce-----eccccccCcceEEeehhh-ccCCCceEEEEECCCCccCc
Confidence 35578999999999999999999999999998854 34444 79999999999 689999 9999866421 0
Q ss_pred CCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC--Cceeee
Q 018318 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GYSLVT 338 (358)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--G~~~~~ 338 (358)
...+|. .. ...-.|+.+.+.+++++.|+++.. ++++....++.+.+++|.+.|.+. ++.+..
T Consensus 224 ~i~GGg----------QE---~g~RsGTenv~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g 287 (386)
T COG1104 224 LIHGGG----------QE---RGLRSGTENVPGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEIIPDVYLNG 287 (386)
T ss_pred eeccCc----------CC---CCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcC
Confidence 001110 00 011135668889999999999876 467888889999999999999975 455544
No 15
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.94 E-value=2.3e-25 Score=213.07 Aligned_cols=278 Identities=16% Similarity=0.147 Sum_probs=194.8
Q ss_pred cceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHH
Q 018318 32 RGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (358)
Q Consensus 32 ~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~ 111 (358)
+.+.+.+++..++++|++++...+..+. ...+. ++-+++++++++++|++.++ ..+++++|+.++.
T Consensus 9 ~~~l~~pGP~~~~~~V~~a~~~~~~~~~-----------~~~~~-~~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~ 74 (401)
T PLN02409 9 RNHLFVPGPVNIPERVLRAMNRPNEDHR-----------SPAFP-ALTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWE 74 (401)
T ss_pred CceeccCCCCCCCHHHHHHhcCCCCCCC-----------CHHHH-HHHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHH
Confidence 4567889999999999999976553321 12333 34457889999999997633 3466677888999
Q ss_pred HHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh---cCCcEEEEc
Q 018318 112 AAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRPKLIICG 188 (358)
Q Consensus 112 ~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~---~~~~~v~~~ 188 (358)
.++.++++|||+|+++.+.|.+.. +. ..++..|..+..++. +. +..+|++++++++++ +++++|+++
T Consensus 75 ~a~~~~~~~Gd~Vlv~~~~~~~~~---~~----~~~~~~g~~v~~v~~--~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~ 144 (401)
T PLN02409 75 SALTNTLSPGDKVVSFRIGQFSLL---WI----DQMQRLNFDVDVVES--PW-GQGADLDILKSKLRQDTNHKIKAVCVV 144 (401)
T ss_pred HHHHhcCCCCCEEEEeCCCchhHH---HH----HHHHHcCCceEEEEC--CC-CCCCCHHHHHHHHhhCcCCCccEEEEE
Confidence 999999999999999986554321 10 122345655444443 32 345899999999976 368888887
Q ss_pred CCC--CCCccchHHHHHH--HHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCC
Q 018318 189 GSA--YPRDWDYARFRAV--ADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK 261 (358)
Q Consensus 189 ~~~--~~~~~~l~~i~~l--a~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~ 261 (358)
+++ +|...|+++|.++ |+++|+++++|++|+.|.. +.+++ ++|++++|+||||.+|.| |+++.+++..
T Consensus 145 ~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~-----~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~ 219 (401)
T PLN02409 145 HNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGAL-----DFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKAL 219 (401)
T ss_pred eecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCc-----cccccccCccEEEEcCccccCcCCCcceeEECHHHH
Confidence 654 4577899999999 9999999999999987643 23343 799999999999988887 9999877532
Q ss_pred C-CCCCCCCCccccHHHHhhhhcCC-CCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 262 P-PKKGQPEGAVYDFEDKINFAVFP-SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 262 ~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
+ +.+.......+.+....+..... ...++++...+.++..|++.+.+.+++.+.+++.++++++++.|++.|++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~ 298 (401)
T PLN02409 220 EASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCT 298 (401)
T ss_pred HHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence 1 11110000000221111110000 11235777788889999998776678899999999999999999999999876
No 16
>PRK02769 histidine decarboxylase; Provisional
Probab=99.94 E-value=1.4e-24 Score=204.69 Aligned_cols=272 Identities=15% Similarity=0.099 Sum_probs=188.9
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh--cCC
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~--~~~ 120 (358)
.+...++.+.......+ |++++.+..|.. ..++|+++++++++++|+++.+.+ .+++++||++|..++.+. +.+
T Consensus 34 ~~~~~~~~~~~~~~~n~--gnp~~~~~~g~~-~~~~e~~~~~~~a~l~g~~~~~~~-G~~TsGgTean~~a~~~ar~~~~ 109 (380)
T PRK02769 34 FDYSALKRFFSFSINNC--GDPYSKSNYPLN-SFDFERDVMNFFAELFKIPFNESW-GYITNGGTEGNLYGCYLARELFP 109 (380)
T ss_pred cCHHHHHHHHHhhhccC--CCccccCCCCCC-hHHHHHHHHHHHHHHhCCCCCCCC-EEEecChHHHHHHHHHHHHHhCC
Confidence 34455555555544433 455443332333 356888899999999999864421 245667789988776554 467
Q ss_pred CCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc--CCcEEEEc--CCCCCCcc
Q 018318 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICG--GSAYPRDW 196 (358)
Q Consensus 121 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~--~~~~v~~~--~~~~~~~~ 196 (358)
+++|+++..+|.++. +.++..|.+...++. + .++.+|+++|+++++++ +|.+|++. ++.+|.+.
T Consensus 110 ~~~ii~s~~~H~Sv~---------ka~~~lg~~~~~V~~--~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~id 177 (380)
T PRK02769 110 DGTLYYSKDTHYSVS---------KIARLLRIKSRVITS--L-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAID 177 (380)
T ss_pred CcEEEeCCCceehHH---------HHHHHcCCCCceecc--C-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccC
Confidence 889999888777653 233445554444443 3 36889999999999864 37776654 34567889
Q ss_pred chHHHHHHHHHhC---CEEEEechhhhhhhhcccc--CCCCC-cccEEEecCCccCCCCCe-eEEEEeCCCCC-CCCCCC
Q 018318 197 DYARFRAVADKCG---ALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKKGQP 268 (358)
Q Consensus 197 ~l~~i~~la~~~g---~~lvvD~a~~~g~~~~~~~--~~~~~-~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~~~~~ 268 (358)
|+++|+++|++|| ++++||+||+.+.+..... +.++. ++|++++|+||++++|.| |+++++++... +.+..
T Consensus 178 pi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~- 256 (380)
T PRK02769 178 NIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDV- 256 (380)
T ss_pred CHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCc-
Confidence 9999999999998 6999999998765532111 12233 799999999999888987 99999875321 11110
Q ss_pred CCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCC
Q 018318 269 EGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (358)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~ 340 (358)
. ++.. ......|+++...+++++++++.+...+++++.++..++++++.+.|++.|++++.++
T Consensus 257 -----~---yl~~-~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p 319 (380)
T PRK02769 257 -----D---YIGS-RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNP 319 (380)
T ss_pred -----c---ccCC-CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC
Confidence 0 1111 1123456677777888999999988778899999999999999999999999988743
No 17
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=3.7e-25 Score=204.48 Aligned_cols=264 Identities=17% Similarity=0.171 Sum_probs=189.1
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCCC
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPH 121 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~g 121 (358)
+..+.++++.+.+.+.+.. . .+.+++|| +++++++|+++ .+.++|||.|+++++.++ ++||
T Consensus 13 i~~~e~~~v~~vl~sg~i~--------~-G~~v~~FE----~~~ae~~G~k~-----ava~~sgT~AL~laL~al~ig~G 74 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLT--------G-GPFVRRFE----QAFAEYLGVKY-----AVAVSSGTAALHLALLALAIGPG 74 (374)
T ss_pred cchHHHHHHHHHHHcCCee--------c-ChHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHHHhcCCCCC
Confidence 5677788888777765421 1 26778999 68999999998 377899999999999977 7999
Q ss_pred CeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHH
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARF 201 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i 201 (358)
|+|++++.++-+.. ..+...|. .++++|+|++++.+|++.+|++|.+ ++|+|+.. ..+|..+|+++|
T Consensus 75 DeVI~ps~TfvATa---------n~i~~~Ga--~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~~i 141 (374)
T COG0399 75 DEVIVPSFTFVATA---------NAVLLVGA--KPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMDAI 141 (374)
T ss_pred CEEEecCCchHHHH---------HHHHHcCC--eEEEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHHHH
Confidence 99999997654321 12334554 6788888888899999999999986 68987643 567888899999
Q ss_pred HHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhh
Q 018318 202 RAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF 281 (358)
Q Consensus 202 ~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (358)
.++|++||++||.|+||+.|..+.+.....++.+-+++|.++|.|....||+++++++ ++.++++.
T Consensus 142 ~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~--------------ela~k~~~ 207 (374)
T COG0399 142 MALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDE--------------ELAEKARS 207 (374)
T ss_pred HHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccccCceEEEeCCH--------------HHHHHHHH
Confidence 9999999999999999999999877654444445555666669997669999999996 56555443
Q ss_pred hcCCCCcC-----------CCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCC----CcceE
Q 018318 282 AVFPSLQG-----------GPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGG----TENHL 345 (358)
Q Consensus 282 ~~~~~~~~-----------~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~----~~~~~ 345 (358)
....+... +. +..+..+.+|+...+.+.++++.++.+++++++.+.|++. ++.+.... ...|+
T Consensus 208 lr~hG~~~~~~~~y~~~~~G~-N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~ 286 (374)
T COG0399 208 LRNHGLSRDAVFKYLHEELGY-NYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHL 286 (374)
T ss_pred HHHhCcCCCccccceeeeccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeee
Confidence 22222110 11 1122233334433333457788899999999999999987 44443321 34566
Q ss_pred EEEEcCC
Q 018318 346 VLWDLRP 352 (358)
Q Consensus 346 ~~v~~~~ 352 (358)
..+-+..
T Consensus 287 ~~i~~~~ 293 (374)
T COG0399 287 YTILVDE 293 (374)
T ss_pred eEEEecC
Confidence 6666554
No 18
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=2.7e-25 Score=210.26 Aligned_cols=267 Identities=17% Similarity=0.184 Sum_probs=187.9
Q ss_pred eccCCCCCHHHHHHHhcccccCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHH
Q 018318 37 IASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT 115 (358)
Q Consensus 37 ~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~ 115 (358)
.++.+++|+.|++++.+++...+ +++++ .+..+..+.+.++ ++++++++++|+++++ .++++++|+++..++.
T Consensus 5 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~---v~~t~~~t~a~~~~l~ 78 (364)
T PLN02651 5 MQATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVE-KARAQVAALIGADPKE---IIFTSGATESNNLAIK 78 (364)
T ss_pred CcCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCCe---EEEeCCHHHHHHHHHH
Confidence 46788899999999988875544 33332 1111223334444 6789999999998642 3445556778777765
Q ss_pred hh----cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 018318 116 AV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA 191 (358)
Q Consensus 116 a~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~ 191 (358)
++ +++||+|++...+|+++.... ..+...|..+ +.++++ .++.+|++++++++++ ++++|++++++
T Consensus 79 ~~~~~~~~~g~~vl~~~~~h~s~~~~~------~~~~~~g~~v--~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~ 148 (364)
T PLN02651 79 GVMHFYKDKKKHVITTQTEHKCVLDSC------RHLQQEGFEV--TYLPVK-SDGLVDLDELAAAIRP-DTALVSVMAVN 148 (364)
T ss_pred HHHHhccCCCCEEEEcccccHHHHHHH------HHHHhcCCEE--EEEccC-CCCcCCHHHHHHhcCC-CcEEEEEECCC
Confidence 54 478999999888876643211 1122345443 344444 3678999999999975 68888876654
Q ss_pred --CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC-CCC
Q 018318 192 --YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKK 265 (358)
Q Consensus 192 --~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~~ 265 (358)
+|...|+++|+++||++|+++++|++|+.|... .+++ ++|++++|+||| .||.| |+++.+++... +.+
T Consensus 149 n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~-----~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p 222 (364)
T PLN02651 149 NEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIP-----VDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRVRLEP 222 (364)
T ss_pred CCceecccHHHHHHHHHHcCCEEEEEcchhhCCcc-----cCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCCCCCc
Confidence 456789999999999999999999999987542 3343 799999999997 68987 99988875321 111
Q ss_pred ---CCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh-C-CceeeeC
Q 018318 266 ---GQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG-K-GYSLVTG 339 (358)
Q Consensus 266 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-G~~~~~~ 339 (358)
++. . . .....|+++...+.++.+|++.+.. +.+.+.++..+.++++.+.|++ . |++++.+
T Consensus 223 ~~~g~~------~----~---~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~ 287 (364)
T PLN02651 223 LMSGGG------Q----E---RGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGP 287 (364)
T ss_pred cccCCC------c----c---CCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECC
Confidence 100 0 0 1122467888889999999998764 5578889999999999999986 3 8998863
No 19
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=6e-25 Score=208.46 Aligned_cols=284 Identities=20% Similarity=0.193 Sum_probs=194.2
Q ss_pred EeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHH
Q 018318 36 LIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT 115 (358)
Q Consensus 36 l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~ 115 (358)
..++.+++|+.|++++.+++...+..+..+. +..+.++.+.++ ++++.+++++|+++++ ..+++.++|.++..++.
T Consensus 4 d~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~r~~la~~lg~~~~~--~v~~~~~~t~a~~~~~~ 79 (371)
T PF00266_consen 4 DNAGTGPMPKSVLEAISDYLRNFYANPHSGV-SHRSREFAEILE-EAREALAKLLGAPPDE--EVVFTSNGTEALNAVAS 79 (371)
T ss_dssp BTSSS-B-BHHHHHHHHHHHHHSGSSTSTSS-STTSHHHHHHHH-HHHHHHHHHHTSSTTE--EEEEESSHHHHHHHHHH
T ss_pred eCCCccCCCHHHHHHHHHHHHHhhhcCcccc-cchhhhhhHHHH-HHHHHHHHhcCCcccc--ccccccccchhhhhhhh
Confidence 4467889999999999988776654332222 222345555664 6889999999999821 23455666779999999
Q ss_pred hh---cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC--
Q 018318 116 AV---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS-- 190 (358)
Q Consensus 116 a~---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~-- 190 (358)
++ +++||+|++.+.+|.+....+. ...+..|..++.++. + .++.+|++++++++. .++++|++.+.
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~s~~~~~~-----~~~~~~g~~v~~i~~--~-~~~~~~~~~~~~~l~-~~~~lv~~~~~~~ 150 (371)
T PF00266_consen 80 SLLNPLKPGDEVLVTSNEHPSNRYPWE-----EIAKRKGAEVRVIPA--D-PGGSLDLEDLEEALN-PDTRLVSISHVEN 150 (371)
T ss_dssp HHHHHGTTTCEEEEEESSHHHHHHHHH-----HHHHHTTEEEEEEEE--G-TTSSCSHHHHHHHHH-TTESEEEEESBET
T ss_pred ccccccccccccccccccccccccccc-----cccccchhhhccccc--c-ccchhhhhhhhhhhc-cccceEEeecccc
Confidence 98 7999999999987766541110 011234665554544 3 357899999999997 48899877653
Q ss_pred CCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC----C
Q 018318 191 AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP----P 263 (358)
Q Consensus 191 ~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~----~ 263 (358)
.+|...|+++|.++||++|+++++|++|+.|.. +.+++ ++|++++|+|| |.||+| |+++.+++..+ .
T Consensus 151 ~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~-----~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~p~ 224 (371)
T PF00266_consen 151 STGVRNPIEEIAKLAHEYGALLVVDAAQSAGCV-----PIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIERLRPA 224 (371)
T ss_dssp TTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTS-----S--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHHHHHTS
T ss_pred cccEEeeeceehhhhhccCCceeEechhccccc-----cccccccccceeeecccc-cCCCCchhhheehhhhhhccccc
Confidence 457788999999999999999999999998864 23444 89999999999 889998 99999885321 1
Q ss_pred CCCCCCCccccHHHH-hhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC-ceeee
Q 018318 264 KKGQPEGAVYDFEDK-INFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG-YSLVT 338 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G-~~~~~ 338 (358)
..++....+...... ..........|+++...+.++..+++.+.+.+++.+.++..++++++.+.|.+.+ +.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~ 301 (371)
T PF00266_consen 225 KPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLG 301 (371)
T ss_dssp SSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESS
T ss_pred cccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEee
Confidence 122211110011110 0111111224678888888999999988656678889999999999999999984 56543
No 20
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=1.7e-24 Score=204.26 Aligned_cols=275 Identities=18% Similarity=0.102 Sum_probs=185.3
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~ 113 (358)
+.++|++..+|++|++++.+.+... ++ ... .++.+++++.+++++|++.++ ..+++.+|++|+..+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~~--------~~---~~~-~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLGH--------RS---PEF-LALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccCC--------CC---HHH-HHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence 3578999999999999997554211 11 112 233345669999999995432 234566778999999
Q ss_pred HHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC--
Q 018318 114 YTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA-- 191 (358)
Q Consensus 114 l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~-- 191 (358)
+.+++++||+|++..+.|.+.. +. ..++..|.++.. ++.+ .++.+|++++++.++++++++|++++++
T Consensus 67 ~~~~~~~g~~vl~~~~~~~~~~---~~----~~~~~~g~~~~~--v~~~-~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~ 136 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGVFGDR---WA----DMAERYGADVDV--VEKP-WGEAVSPEEIAEALEQHDIKAVTLTHNETS 136 (356)
T ss_pred HHHhCCCCCEEEEecCCchhHH---HH----HHHHHhCCCeEE--eecC-CCCCCCHHHHHHHHhccCCCEEEEeccCCC
Confidence 9999999999999876554321 00 122345654444 4444 2568999999999976578988877665
Q ss_pred CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC-C-cccEEEecCCccCCCCCe-eEEEEeCCCCC-CCC--
Q 018318 192 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-E-YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKK-- 265 (358)
Q Consensus 192 ~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~-~-~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~~-- 265 (358)
+|...|+++|.++|+++|+++++|++|+.|... .++ . ++|++++|+||+|++|.| |+++.+++..+ +..
T Consensus 137 ~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~-----~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~ 211 (356)
T cd06451 137 TGVLNPLEGIGALAKKHDALLIVDAVSSLGGEP-----FRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKT 211 (356)
T ss_pred cccccCHHHHHHHHHhcCCEEEEeeehhccCcc-----ccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcC
Confidence 446789999999999999999999999876432 222 2 789999999999998877 88888774211 100
Q ss_pred CCCCCccccHHHHhhhhcCC-CCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 266 GQPEGAVYDFEDKINFAVFP-SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
.....+ ............. ...++++...++++.++++.+...+++...++..++++++.+.|.+.|+++..
T Consensus 212 ~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 284 (356)
T cd06451 212 KPKGFY-FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLA 284 (356)
T ss_pred CCCcee-ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence 000000 0000000000001 22345666667777888887665556788889999999999999999998875
No 21
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.94 E-value=1.2e-24 Score=208.62 Aligned_cols=294 Identities=17% Similarity=0.148 Sum_probs=196.0
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHhcCC-CCCCCCccccccCChHHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHL-DPTQWGVNVQPYSGSPANF 111 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~-~~~~~~~~~~~le~~~~~~la~~~g~-~~~~~~~~v~~~sGt~a~~ 111 (358)
+.-.++.+++|+.|++++..++...+ +++.. .+..+..+.+.++ .+|+.+++++|+ ++++ ++++.++|+++.
T Consensus 22 yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~~---i~~~~~~t~~i~ 95 (401)
T PRK10874 22 YLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYE-AAREQVAQLLNAPDAKN---IVWTRGTTESIN 95 (401)
T ss_pred EEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHcCCCCCCE---EEEECCHHHHHH
Confidence 34446778889999999988875443 33321 2222334444554 678999999999 4432 233444567888
Q ss_pred HHHHhh----cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 112 AAYTAV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 112 ~~l~a~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
.++.++ +++||+|++++++|.+.+.... ..++..|+.+..+ +.+ .++.+|++++++++.+ ++++|++
T Consensus 96 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~-----~~~~~~g~~v~~v--~~~-~~~~~d~~~l~~~i~~-~t~lv~i 166 (401)
T PRK10874 96 LVAQSYARPRLQPGDEIIVSEAEHHANLVPWL-----MVAQQTGAKVVKL--PLG-ADRLPDVDLLPELITP-RTRILAL 166 (401)
T ss_pred HHHHHhhhccCCCcCEEEECCcchHHHHHHHH-----HHHHHhCCEEEEE--ecC-CCCcCCHHHHHHhcCc-CcEEEEE
Confidence 888887 4799999999998876432110 1123456544444 444 3578999999999964 7899988
Q ss_pred cCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC
Q 018318 188 GGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP 262 (358)
Q Consensus 188 ~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~ 262 (358)
++++++ ...|+++|+++|+++|+++++|++|+.|... .++. ++|++++|+||. .||.| |+++.+++..+
T Consensus 167 ~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~-----~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~ 240 (401)
T PRK10874 167 GQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFP-----ADVQALDIDFYAFSGHKL-YGPTGIGVLYGKSELLE 240 (401)
T ss_pred eCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccccc-----CCchhcCCCEEEEecccc-cCCCccEEEEEchHHHh
Confidence 876654 6789999999999999999999999876542 2333 789999999995 57887 99988775422
Q ss_pred -CCC---CCCCCccccHHHHhhh--hcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cce
Q 018318 263 -PKK---GQPEGAVYDFEDKINF--AVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (358)
Q Consensus 263 -~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~ 335 (358)
+.+ ++.......+. .... .......|+++...++++.+|++.+.+.+.....++..++++++.+.|+++ |++
T Consensus 241 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~ 319 (401)
T PRK10874 241 AMSPWQGGGKMLTEVSFD-GFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFR 319 (401)
T ss_pred cCCCeecCCcceEeeccC-ccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 211 11110000000 0000 001112367777888888888887655556677788888999999999987 888
Q ss_pred eeeCCCcceEEEEEc
Q 018318 336 LVTGGTENHLVLWDL 350 (358)
Q Consensus 336 ~~~~~~~~~~~~v~~ 350 (358)
++.. ..+.++++.+
T Consensus 320 ~~~~-~~~~i~~~~~ 333 (401)
T PRK10874 320 SFRC-QDSSLLAFDF 333 (401)
T ss_pred EeCC-CCCcEEEEEE
Confidence 7753 3455666654
No 22
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=1.9e-24 Score=201.22 Aligned_cols=272 Identities=22% Similarity=0.239 Sum_probs=202.5
Q ss_pred ceeEeccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh
Q 018318 33 GIELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (358)
Q Consensus 33 ~~~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt 107 (358)
.+..+++++++ +|.+++++.+.+. .|+.|.+++|...|. +...+|| +.+|+++|.+. .+.++||.
T Consensus 40 ~~~nf~SNdYLGLa~~~~~~~a~~~~~~-~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~-----al~f~SGy 109 (388)
T COG0156 40 KVLNFCSNDYLGLASHPELIEAAKAAIR-RYGVGAGGSRLISGTSDLHVELE----EELADFLGAEA-----ALLFSSGF 109 (388)
T ss_pred eeEeeeccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEEcccc
Confidence 45666789987 7899999988875 566677788866666 4566888 78999999987 47799999
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcC-----C
Q 018318 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFR-----P 182 (358)
Q Consensus 108 ~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~-----~ 182 (358)
.||..++.++++++|.|+.....|.+.+. .+++.++ +.+.+. +.|+++||+++++.+ .
T Consensus 110 ~AN~~~i~~l~~~~dli~~D~lnHASiid---------G~rls~a--~~~~f~------HnD~~~Le~~l~~~~~~~~~~ 172 (388)
T COG0156 110 VANLGLLSALLKKGDLIFSDELNHASIID---------GIRLSRA--EVRRFK------HNDLDHLEALLEEARENGARR 172 (388)
T ss_pred hhHHHHHHHhcCCCcEEEEechhhhhHHH---------HHHhCCC--cEEEec------CCCHHHHHHHHHhhhccCCCc
Confidence 99999999999999999999988876542 2344443 344453 689999999997731 3
Q ss_pred cEEEEc--CCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CC--C--CcccEEEecCCccCCCCCeeEE
Q 018318 183 KLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NP--F--EYCHIVTTTTHKSLRGPRAGMI 254 (358)
Q Consensus 183 ~~v~~~--~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~--~--~~~d~~~~s~~K~l~g~~gG~i 254 (358)
++|+++ .|+.|...||++|.+++++||++++||++|+.|+.+..... .. + ..+||+++|++|+|+ .-||++
T Consensus 173 ~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v 251 (388)
T COG0156 173 KLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYI 251 (388)
T ss_pred eEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccCcee
Confidence 555554 24566778999999999999999999999999988742111 11 1 145899999999985 678999
Q ss_pred EEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHH-HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI-GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
.++. .+.+.+.....++..++..++.+ ++...+++.+. +..+.+++++++..++++.+...|
T Consensus 252 ~g~~---------------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~~ 314 (388)
T COG0156 252 AGSA---------------ALIDYLRNRARPFIFSTALPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKALG 314 (388)
T ss_pred eCcH---------------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcC
Confidence 9888 46666655444554444444444 45556666653 456888999999999998888888
Q ss_pred ceeeeCCCcceEEEEEcC
Q 018318 334 YSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 334 ~~~~~~~~~~~~~~v~~~ 351 (358)
+.+. ++.++++++-+.
T Consensus 315 ~~~~--~s~s~I~pv~~g 330 (388)
T COG0156 315 LVLL--PSESPIIPVILG 330 (388)
T ss_pred CccC--CCCCCeeeeEeC
Confidence 8764 367888877654
No 23
>PLN03032 serine decarboxylase; Provisional
Probab=99.93 E-value=2.2e-23 Score=195.33 Aligned_cols=272 Identities=18% Similarity=0.155 Sum_probs=190.1
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CC
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EP 120 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~ 120 (358)
....+++++..++.+.+ |+|++.+..|.. ..++|+++++++++++|+++++++ -+++++||+||..++.+.. .+
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g~~-a~~~e~~v~~~ia~llg~~~~~~~-G~fTsGGTEaNl~al~~ar~~~~ 110 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNYGVH-SRQFEVGVLDWFARLWELEKDEYW-GYITTCGTEGNLHGILVGREVFP 110 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCCCcc-HHHHHHHHHHHHHHHhCCCCccCC-EEEeCchHHHHHHHHHHHHHhCC
Confidence 45567888887765544 566655444433 457888999999999999875431 2567778999998877653 35
Q ss_pred CCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc--CCcEEEE--cCCCCCCcc
Q 018318 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIIC--GGSAYPRDW 196 (358)
Q Consensus 121 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~--~~~~v~~--~~~~~~~~~ 196 (358)
+..|+++..+|.+.. +.++..|.++..++ ++ .++.+|+++|+++++++ +|.+|++ +++.+|.+.
T Consensus 111 ~~~vi~s~~~H~Sv~---------kaa~~lg~~~~~V~--~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id 178 (374)
T PLN03032 111 DGILYASRESHYSVF---------KAARMYRMEAVKVP--TL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD 178 (374)
T ss_pred CcEEEeCCCceeHHH---------HHHHHcCCCCeEee--eC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC
Confidence 567888877776543 23445565544444 44 47899999999999764 3666654 456678899
Q ss_pred chHHHHHHHHHhC-----CEEEEechhhhhhhhcccc--CCCCC-cccEEEecCCccCCCCCe-eEEEEeCCCCC-CCCC
Q 018318 197 DYARFRAVADKCG-----ALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKKG 266 (358)
Q Consensus 197 ~l~~i~~la~~~g-----~~lvvD~a~~~g~~~~~~~--~~~~~-~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~~~ 266 (358)
|+++|+++|+++| ++++||+||+.+....... ..++. ++|.+++|+||+++.|.| |+++++++..+ +...
T Consensus 179 pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~ 258 (374)
T PLN03032 179 DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQN 258 (374)
T ss_pred CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccC
Confidence 9999999999996 5899999987765532110 11222 799999999998766988 99999875321 0000
Q ss_pred CCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCC
Q 018318 267 QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (358)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~ 340 (358)
. +++... ...+.++.+....+.++++++.+..+++.+++++..++++++.+.|++.|++++.++
T Consensus 259 ~---------~Yl~~~-d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p 322 (374)
T PLN03032 259 V---------EYLNSR-DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNE 322 (374)
T ss_pred C---------cccCCC-CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECC
Confidence 0 011111 123445555555667888888888788899999999999999999999999887643
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.93 E-value=2.6e-24 Score=206.48 Aligned_cols=295 Identities=15% Similarity=0.120 Sum_probs=196.5
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHhcCCC-CCCCCccccccCC-hHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYSG-SPAN 110 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~-~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~v~~~sG-t~a~ 110 (358)
+.-.++.+++|+.|++++..++...+. ++.. .+..+....+.++ .+|+.+++++|+. ++ .|++++| |+++
T Consensus 26 Yld~a~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~~~~~~~----~v~~t~g~t~~l 98 (406)
T PRK09295 26 YLDSAASAQKPSQVIDAEAEFYRHGYA--AVHRGIHTLSAQATEKME-NVRKQAALFINARSAE----ELVFVRGTTEGI 98 (406)
T ss_pred EEeCcccccCCHHHHHHHHHHHHhcCC--CCCCcccHHHHHHHHHHH-HHHHHHHHHcCcCCCC----eEEEeCCHHHHH
Confidence 344467888999999999888764432 2211 2222334455565 6789999999984 43 2444554 6788
Q ss_pred HHHHHh----hcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEE
Q 018318 111 FAAYTA----VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186 (358)
Q Consensus 111 ~~~l~a----~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~ 186 (358)
..++.+ .+++||+|+++.++|++.+..+. ...+..|+.+..+ +.+ .++.+|++++++++++ ++++|+
T Consensus 99 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~-----~~~~~~g~~v~~v--~~~-~~~~~d~~~l~~~i~~-~t~lv~ 169 (406)
T PRK09295 99 NLVANSWGNSNVRAGDNIIISEMEHHANIVPWQ-----MLCARVGAELRVI--PLN-PDGTLQLETLPALFDE-RTRLLA 169 (406)
T ss_pred HHHHHHhhhhcCCCcCEEEECcchhhHHHHHHH-----HHHHHcCcEEEEE--ecC-CCCCCCHHHHHHhcCC-CcEEEE
Confidence 888776 46899999999988876432111 1123346544444 444 3578999999999865 789998
Q ss_pred EcCCCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCC
Q 018318 187 CGGSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK 261 (358)
Q Consensus 187 ~~~~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~ 261 (358)
+++++| |...|+++|.++||++|+++++|++|+.|.. +.++. ++|++++|+|| +.||.| |+++.+++..
T Consensus 170 l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G~G~l~~~~~~~ 243 (406)
T PRK09295 170 ITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHH-----PVDVQALDCDFYVFSGHK-LYGPTGIGILYVKEALL 243 (406)
T ss_pred EecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCcc-----ccCchhcCCCEEEeehhh-ccCCCCcEEEEEchHhH
Confidence 877654 4678999999999999999999999987753 23343 78999999999 557887 9999887642
Q ss_pred C-CCC---CCCCCccccHHHH--hhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cc
Q 018318 262 P-PKK---GQPEGAVYDFEDK--INFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GY 334 (358)
Q Consensus 262 ~-~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~ 334 (358)
+ +.+ ++....+...... ..........|+++...++++.+|++.+.+.+++.+.++..++++++++.|+++ |+
T Consensus 244 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~ 323 (406)
T PRK09295 244 QEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDL 323 (406)
T ss_pred hhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 2 221 1111000000000 000001122467888889999999988765566788888999999999999887 78
Q ss_pred eeeeCCCcceEEEEEc
Q 018318 335 SLVTGGTENHLVLWDL 350 (358)
Q Consensus 335 ~~~~~~~~~~~~~v~~ 350 (358)
+++.+....+++.+.+
T Consensus 324 ~~~~~~~~~~iv~~~~ 339 (406)
T PRK09295 324 TLYGPQNRLGVIAFNL 339 (406)
T ss_pred EEeCCCCCceEEEEEE
Confidence 8876322344554443
No 25
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.93 E-value=3.4e-24 Score=205.16 Aligned_cols=295 Identities=16% Similarity=0.100 Sum_probs=194.7
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCC-CCCCCCchhHHHHHHHHHHHHHHhcCCC-CCCCCccccccCChHHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPG-NRYYGGNEFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYSGSPANF 111 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~-~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~v~~~sGt~a~~ 111 (358)
+.-.++.+++|+.|++++.+++...+ +++. +.+..+.+....++ .+|+.+++++|++ +++ .+++.++|+++.
T Consensus 19 yld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~~---i~~t~g~t~~l~ 92 (398)
T TIGR03392 19 YLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYE-LARQQVARFLNAPDAEN---IVWTRGTTESIN 92 (398)
T ss_pred EeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCCe---EEEeCChHHHHH
Confidence 44446777889999999988775433 3332 12223334444554 6789999999995 332 244455567999
Q ss_pred HHHHhh----cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 112 AAYTAV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 112 ~~l~a~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
.++.++ +++||+|+++.++|.+.+.... ..++..|+.+ +.++.+ .++.+|++++++++.+ ++++|++
T Consensus 93 ~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~-----~~~~~~g~~v--~~v~~~-~~~~~~~~~l~~~i~~-~t~lv~i 163 (398)
T TIGR03392 93 LVAQSYARPRLQPGDEIIVSEAEHHANLIPWL-----MVAQQTGAKV--VKLPIG-ADLLPDIRQLPELLTP-RTRILAL 163 (398)
T ss_pred HHHHHhhhccCCCCCEEEECCcchhHHHHHHH-----HHHHHcCcEE--EEEecC-CCCCcCHHHHHHHhcc-CceEEEE
Confidence 888887 5899999999998876432110 1123456544 444444 3567999999999965 7899888
Q ss_pred cCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC
Q 018318 188 GGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP 262 (358)
Q Consensus 188 ~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~ 262 (358)
++++|+ ...|+++|+++|+++|+++++|++|+.|... .++. ++|++++|+||. .||.| |+++.+++..+
T Consensus 164 ~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~-----~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~ 237 (398)
T TIGR03392 164 GQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGP-----PDVQALDIDFYAFSGHKL-YGPTGIGVLYGKTELLE 237 (398)
T ss_pred ECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCC-----CChhhcCCCEEEEecccc-cCCCceEEEEEcHHHHh
Confidence 776654 6789999999999999999999999876432 2232 789999999995 57877 99988775321
Q ss_pred -CCC---CCCCCccccHHHH-hhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Ccee
Q 018318 263 -PKK---GQPEGAVYDFEDK-INFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSL 336 (358)
Q Consensus 263 -~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~ 336 (358)
+.+ ++........... ..........|+++...++++.+|++.+.+.+++.+.++..++++++++.|.++ |+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~ 317 (398)
T TIGR03392 238 AMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRS 317 (398)
T ss_pred hCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 211 1110000000000 000001112467788888888999987755556777888899999999999887 8887
Q ss_pred eeCCCcceEEEEEc
Q 018318 337 VTGGTENHLVLWDL 350 (358)
Q Consensus 337 ~~~~~~~~~~~v~~ 350 (358)
+.. ...+++++.+
T Consensus 318 ~~~-~~~~i~~~~~ 330 (398)
T TIGR03392 318 FRC-PGSSLLAFDF 330 (398)
T ss_pred eCC-CCCcEEEEEe
Confidence 653 3445666554
No 26
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=1.6e-24 Score=204.25 Aligned_cols=272 Identities=18% Similarity=0.168 Sum_probs=184.8
Q ss_pred eccCCCCCHHHHHHHhcccccCCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHH
Q 018318 37 IASENFTSFAVIEALGSALTNKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT 115 (358)
Q Consensus 37 ~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~-~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~ 115 (358)
.++.+++|+.|++++.+++...+ ++++.+ +..+....+.+ +.+++++++++|+++++ .++++++++++..++.
T Consensus 4 ~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~r~~la~~~g~~~~~---v~~~~g~t~a~~~~l~ 77 (353)
T TIGR03235 4 HNATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAV-ERARKQVAEALGADTEE---VIFTSGATESNNLAIL 77 (353)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHH-HHHHHHHHHHhCCCCCe---EEEeCCHHHHHHHHHH
Confidence 35677889999999988775433 344432 11122222334 46789999999998642 2434444678888888
Q ss_pred hhc----CCC-CeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 018318 116 AVL----EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS 190 (358)
Q Consensus 116 a~~----~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~ 190 (358)
++. ++| +.|++...+|+++.... ..+...|.. ++.++.+ .++.+|++++++++++ ++++|+++++
T Consensus 78 ~l~~~~~~~g~~~vi~~~~~~~s~~~~~------~~~~~~G~~--v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~ 147 (353)
T TIGR03235 78 GLARAGEQKGKKHIITSAIEHPAVLEPI------RALERNGFT--VTYLPVD-ESGRIDVDELADAIRP-DTLLVSIMHV 147 (353)
T ss_pred HHHHhcccCCCCeeeEcccccHHHHHHH------HHHHhcCCE--EEEEccC-CCCcCCHHHHHHhCCC-CCEEEEEEcc
Confidence 774 356 77888887777654221 112234544 4444444 3578999999999864 6888887766
Q ss_pred CC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCCCCC
Q 018318 191 AY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKK 265 (358)
Q Consensus 191 ~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~~~~ 265 (358)
++ |...|+++|.++|+++|+++++|++|+.|... .+++ ++|++++|+||++ ||.| |+++.+++......
T Consensus 148 ~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~-----~~~~~~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~~~ 221 (353)
T TIGR03235 148 NNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKIT-----VDLSADRIDLISCSGHKIY-GPKGIGALVIRKRGKPKAP 221 (353)
T ss_pred cCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCcc-----ccccccCCCEEEeehhhcC-CCCceEEEEEccCcccccc
Confidence 54 46789999999999999999999999988642 2333 7999999999985 7887 89888875311000
Q ss_pred CCCCCccccHHHHhhhh-cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeC
Q 018318 266 GQPEGAVYDFEDKINFA-VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG 339 (358)
Q Consensus 266 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~ 339 (358)
..+.+ .... ......++++.+.++++.++++.+. .+.+.+.++++++++++++.|++.|++++.+
T Consensus 222 ~~~~~--------~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~ 287 (353)
T TIGR03235 222 LKPIM--------FGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGD 287 (353)
T ss_pred cCcee--------eCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCC
Confidence 00000 0000 0011235677788888888988765 4667888999999999999999899998753
No 27
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.93 E-value=6.7e-24 Score=202.20 Aligned_cols=270 Identities=13% Similarity=0.046 Sum_probs=175.9
Q ss_pred cCCCCCHHHHHHHhcccccCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh
Q 018318 39 SENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV 117 (358)
Q Consensus 39 ~~~~~~~~V~~a~~~~~~~~~~~g~~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~ 117 (358)
-..++++++++|+.++.. .+ +.+++ .+..+......+ ++.++.+++++|++. .++++++++|+..++.++
T Consensus 28 ~~~p~~~~~~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~-~~l~~~lA~~~g~~~-----~~~~~g~t~a~~~al~~l 98 (387)
T PRK09331 28 RGGILTPEARKALIEYGD-GY--SVCDYCPGRLDQIKKPPI-ADFHEDLAEFLGMDE-----ARVTHGAREGKFAVMHSL 98 (387)
T ss_pred cCCCCCHHHHHHHHHHHh-cc--CCCcccccccccccChHH-HHHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHh
Confidence 456789999999988763 22 22221 112221111122 244588999999975 245677788999999999
Q ss_pred cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccC-CCCCCCCHHHHHHHHhhc------CCcEEEEcCC
Q 018318 118 LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN-SSTGYIDYDKLEEKALDF------RPKLIICGGS 190 (358)
Q Consensus 118 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~id~~~l~~~l~~~------~~~~v~~~~~ 190 (358)
+++||+|++..+.|.+.+ ..+...|..+ +.++.+ ..++.+|+++++++++++ ++++|+++++
T Consensus 99 ~~~gd~Vlv~~~~h~s~~---------~~~~~~G~~~--~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~ 167 (387)
T PRK09331 99 CKKGDYVVLDGLAHYTSY---------VAAERAGLNV--REVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHV 167 (387)
T ss_pred cCCCCEEEECCCchHHHH---------HHHHHcCCEE--EEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECC
Confidence 999999999887665433 1234456544 444441 135789999999999753 5788888766
Q ss_pred C--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCC-eeEEEEeCCCCCCCC
Q 018318 191 A--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPR-AGMIFYRKGPKPPKK 265 (358)
Q Consensus 191 ~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~-gG~i~~~~~~~~~~~ 265 (358)
+ +|...|+++|.++||+||+++++|++|+.|... .+.. ++|++++|+||++++|. +|+++++++
T Consensus 168 ~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~-----~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~------ 236 (387)
T PRK09331 168 DGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMP-----VDGKKLGADFIVGSGHKSMAASAPSGVLATTEE------ 236 (387)
T ss_pred CCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcC-----CCHHHcCCCEEEeeCcccccCCCCEEEEEECHH------
Confidence 5 456789999999999999999999999877432 2222 78999999999997664 588888774
Q ss_pred CCCCCccccHHHHhhhhcCC-------CCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceee
Q 018318 266 GQPEGAVYDFEDKINFAVFP-------SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLV 337 (358)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~ 337 (358)
+.+.+.....+ ...++......+++.++++.+.. . ....++..++++++++.|+++ |++++
T Consensus 237 ---------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~l~g~~~~ 305 (387)
T PRK09331 237 ---------YADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVE-R-VKRWDEEVKKARWFVDELEKIEGFKQL 305 (387)
T ss_pred ---------HHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 22222111000 01111222223344455555432 2 234566788899999999999 99998
Q ss_pred eC-CCcceEEEEEc
Q 018318 338 TG-GTENHLVLWDL 350 (358)
Q Consensus 338 ~~-~~~~~~~~v~~ 350 (358)
.. ...++++.++.
T Consensus 306 ~~~~~~~~i~~~~~ 319 (387)
T PRK09331 306 GEKPRNHDLMKFET 319 (387)
T ss_pred ccCcCcCCeEEEeC
Confidence 42 23455555553
No 28
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.93 E-value=9.5e-24 Score=200.36 Aligned_cols=293 Identities=15% Similarity=0.099 Sum_probs=192.8
Q ss_pred eccCCCCCHHHHHHHhcccccCCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHhcCCC-CCCCCccccccCChHHHHHHH
Q 018318 37 IASENFTSFAVIEALGSALTNKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYSGSPANFAAY 114 (358)
Q Consensus 37 ~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~-~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~v~~~sGt~a~~~~l 114 (358)
.++..++|+.+++++.+.+...+ +++.+. +..+......+ .++++++++++|++ +. ..++++++++++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~---~v~~~~g~t~a~~~~~ 78 (373)
T cd06453 5 NAATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAY-EAAREKVARFINAPSPD---EIIFTRNTTEAINLVA 78 (373)
T ss_pred CccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHH-HHHHHHHHHHhCCCCCC---eEEEeCCHHHHHHHHH
Confidence 35677889999999988875443 333221 11222333333 46778999999998 43 2244556678999999
Q ss_pred HhhcC---CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 018318 115 TAVLE---PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA 191 (358)
Q Consensus 115 ~a~~~---~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~ 191 (358)
.++.. +||+|++.+++|.+.+.... ...+..|..+.. ++.+ .++.+|++++++++.+ ++++|++++++
T Consensus 79 ~~l~~~~~~g~~vl~~~~~~~~~~~~~~-----~~~~~~g~~~~~--v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~ 149 (373)
T cd06453 79 YGLGRANKPGDEIVTSVMEHHSNIVPWQ-----QLAERTGAKLKV--VPVD-DDGQLDLEALEKLLTE-RTKLVAVTHVS 149 (373)
T ss_pred HHhhhcCCCCCEEEECcchhHHHHHHHH-----HHHhhcCcEEEE--eecC-CCCCcCHHHHHHHhcC-CceEEEEeCcc
Confidence 88866 89999999988876431110 011234654444 4444 3678999999999975 78888887766
Q ss_pred C--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCeeEEEEeCCCCC-CCC-
Q 018318 192 Y--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRAGMIFYRKGPKP-PKK- 265 (358)
Q Consensus 192 ~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~gG~i~~~~~~~~-~~~- 265 (358)
+ |...|+++|.++|++||+++++|++|+.|... .++. ++|++++|+||++++++.|+++++++..+ +.+
T Consensus 150 ~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~-----~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~ 224 (373)
T cd06453 150 NVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMP-----VDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPY 224 (373)
T ss_pred cccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCcee-----eeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCe
Confidence 4 46779999999999999999999998876532 2232 78999999999987755599888775432 111
Q ss_pred --CCCCCc-cc-cHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCC
Q 018318 266 --GQPEGA-VY-DFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGG 340 (358)
Q Consensus 266 --~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~ 340 (358)
++.... ++ .... ..........++++...+.++..+++.+...+++.+.++..++++++++.|.+. |++++.+.
T Consensus 225 ~~g~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 303 (373)
T cd06453 225 GGGGEMIEEVSFEETT-YADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDA 303 (373)
T ss_pred ecCCCccccccccccc-cCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCc
Confidence 111000 00 0000 000000111245666777788888887765556778888899999999999988 78887432
Q ss_pred -CcceEEEEEc
Q 018318 341 -TENHLVLWDL 350 (358)
Q Consensus 341 -~~~~~~~v~~ 350 (358)
...+.+++.+
T Consensus 304 ~~~~~~~~~~~ 314 (373)
T cd06453 304 EDRAGVVSFNL 314 (373)
T ss_pred cccCCeEEEEE
Confidence 2455666654
No 29
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=2.3e-23 Score=197.00 Aligned_cols=274 Identities=14% Similarity=0.055 Sum_probs=184.0
Q ss_pred ceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHH
Q 018318 33 GIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (358)
Q Consensus 33 ~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~ 112 (358)
.+.|.+++..++++|.+++.... .++ +.++...++ .+++.+++++|+++.+. ..+++++||.++..
T Consensus 4 ~~l~~pgp~~~~~~v~~~~~~~~-~~~-----------~~~~~~~~~-~~r~~la~l~~~~~~~~-~i~~t~~~t~al~~ 69 (363)
T TIGR02326 4 YLLLTPGPLTTSRTVKEAMLFDW-CTW-----------DSDYNIVVE-QIRQQLLALATAEEGYT-SVLLQGSGTFAVEA 69 (363)
T ss_pred eeEecCCCCCCCHHHHHHhCCCC-CCC-----------ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCCHHHHHH
Confidence 56788999999999999987544 111 235565665 67899999999975311 23566788999999
Q ss_pred HHHhhcCCCCeEEEecC-CCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-CCcEEEEcCC
Q 018318 113 AYTAVLEPHDRIMGLDL-PSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-RPKLIICGGS 190 (358)
Q Consensus 113 ~l~a~~~~gd~Vl~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~-~~~~v~~~~~ 190 (358)
++.+++.+||.+++..+ .|+..+. ..++..|..+..+++ + .++.+|+++++++++++ ++++|++.++
T Consensus 70 ~~~~l~~~~~~vlv~~~~~~~~~~~--------~~a~~~g~~~~~v~~--~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~ 138 (363)
T TIGR02326 70 VIGSAVPKDGKLLVVINGAYGARIV--------QIAEYLGIPHHVVDT--G-EVEPPDVVEVEAILAADPAITHIALVHC 138 (363)
T ss_pred HHHhcCCCCCeEEEEeCChhhHHHH--------HHHHHcCCceEEEeC--C-CCCCCCHHHHHHHHhhCCCccEEEEEee
Confidence 99999888888776553 2221110 012345654444443 3 35689999999998753 3466655544
Q ss_pred C--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCC-CCC
Q 018318 191 A--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK-PPK 264 (358)
Q Consensus 191 ~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~-~~~ 264 (358)
+ +|...|+++|.++||+||+++++|++|+.|.. +.++. ++|++++|+||||.||.| |+++++++.. +..
T Consensus 139 ~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~-----~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~ 213 (363)
T TIGR02326 139 ETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGI-----PIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACK 213 (363)
T ss_pred cCCccccCcHHHHHHHHHHcCCEEEEEccccccCc-----ccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhh
Confidence 4 56788999999999999999999999987643 23343 789999999999988888 9999877421 111
Q ss_pred CCCCCCccccHHH---HhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 265 KGQPEGAVYDFED---KINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 265 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
+.....+ .++.. .+... ......+++.+.+.++..|++.+..++ ++++.+++.++++++++.|+++|++++.
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~-~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 289 (363)
T TIGR02326 214 GNARSLS-LDLYDQWRCMEDN-HGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLL 289 (363)
T ss_pred cCCCcee-ecHHHHHHHHhcc-CCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence 1100000 01110 11100 000111345667777888888765443 6778899999999999999999998864
No 30
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.92 E-value=5.4e-24 Score=191.03 Aligned_cols=275 Identities=17% Similarity=0.190 Sum_probs=207.3
Q ss_pred cceeEeccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCCch-hHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGNE-FIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~-~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+.+..+++++ +|.|++|+...+. ++|.|..|.|...|.. +..+|| ..||++++-+. .+.|+|.
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~-~hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~a-----ALlFsSC 240 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLD-RHGAGAGGTRNISGHSKHHVRLE----AELADLHQKEA-----ALLFSSC 240 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHH-HcCCCcCCccccCCCCchhhhHH----HHHHHHhcCcc-----eeeeeee
Confidence 457788899987 7999999998875 5666777777777764 556888 67999998775 4778999
Q ss_pred hHHHHHHHHhhcC--CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc---C
Q 018318 107 SPANFAAYTAVLE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---R 181 (358)
Q Consensus 107 t~a~~~~l~a~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~---~ 181 (358)
..||...+..+.+ ||-+|+.....|.+.+ .+ ++-.++ .-..+ .+.|+++|+++++.. .
T Consensus 241 fVANDstLftLak~lpgcei~SD~gNHASMI-~G--------Irns~v--~K~IF------rHND~~hL~~lL~~~~~sv 303 (570)
T KOG1360|consen 241 FVANDSTLFTLAKKLPGCEIFSDEGNHASMI-QG--------IRNSRV--PKHIF------RHNDLDHLEQLLQSSPKSV 303 (570)
T ss_pred eeccchHHHHHHHHCCCcEEeccccchHHHH-HH--------hhhcCC--cceee------ccCCHHHHHHHHHhCCCCC
Confidence 9999998888743 8999998887765433 11 122221 11112 268999999999763 3
Q ss_pred CcEEEEc--CCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccc-----cCCCCCcccEEEecCCccCCCCCeeEE
Q 018318 182 PKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQE-----AANPFEYCHIVTTTTHKSLRGPRAGMI 254 (358)
Q Consensus 182 ~~~v~~~--~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-----~~~~~~~~d~~~~s~~K~l~g~~gG~i 254 (358)
||+|.+. ++..|.++|+++|++++++||++.++|+.|+.|+.+... .+..+..+||+++++.|.| |.-||+|
T Consensus 304 PKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYI 382 (570)
T KOG1360|consen 304 PKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYI 382 (570)
T ss_pred CceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-cccccee
Confidence 7888765 456778999999999999999999999999999876421 1122236899999999997 6789999
Q ss_pred EEeCCCCCCCCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
...+ .+.+.++.....++ .++..++.+++...|++.+..++....++++++|.+++++.|.+.|
T Consensus 383 Aat~---------------~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~G 447 (570)
T KOG1360|consen 383 AATR---------------KLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELG 447 (570)
T ss_pred hhhh---------------hHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 9887 46777765432222 2344556677777888887766677888889999999999999999
Q ss_pred ceeeeCCCcceEEEEEcC
Q 018318 334 YSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 334 ~~~~~~~~~~~~~~v~~~ 351 (358)
+++.+ .++|++.+.+-
T Consensus 448 iPVi~--~pSHIiPv~vg 463 (570)
T KOG1360|consen 448 IPVIP--NPSHIIPVRVG 463 (570)
T ss_pred CcccC--CCcceeeeecc
Confidence 99985 67999998764
No 31
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.92 E-value=1.3e-23 Score=203.01 Aligned_cols=301 Identities=17% Similarity=0.184 Sum_probs=196.8
Q ss_pred cccccccchHHHHHHHHHHHHhh----cceeEeccCC---CCCH----HHHHHHhcccccCCCCCCCCCCCCCCchhHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRRQC----RGIELIASEN---FTSF----AVIEALGSALTNKYSEGMPGNRYYGGNEFIDE 77 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~a~~~---~~~~----~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (358)
..+++.+.+..+..+.+.+.+.+ ..+.|..++. +.+| .+.+++.+.+.... +. |.+.....+
T Consensus 10 ~~r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~-~~------Y~~~~g~~~ 82 (460)
T PRK13238 10 PFRIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGD-EA------YAGSRSYYR 82 (460)
T ss_pred ceeeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCC-cc------cCCCCCHHH
Confidence 45667777776655555444333 3455555543 4433 36666666553221 12 334455667
Q ss_pred HHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEe
Q 018318 78 IENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (358)
Q Consensus 78 le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 157 (358)
|+ +.+++++|.+. .+++++|+.|+..++.++++||| |+++.+.+..+. ..+.+.|.....+
T Consensus 83 Lr----eaia~~~~~~~-----vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~---------~~i~~~G~~~v~v 143 (460)
T PRK13238 83 LE----DAVKDIFGYPY-----TIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTR---------AHIELNGATAVDL 143 (460)
T ss_pred HH----HHHHHHhCCCc-----EEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchH---------HHHHHcCCEEEEE
Confidence 76 67888999775 36677888999999999999999 777665433221 1234566544444
Q ss_pred eccc-------CCCCCCCCHHHHHHHHhhc---CCcEEEEcCCCCC---Ccc---chHHHHHHHHHhCCEEEEechhhhh
Q 018318 158 PYKV-------NSSTGYIDYDKLEEKALDF---RPKLIICGGSAYP---RDW---DYARFRAVADKCGALLLCDMAHISG 221 (358)
Q Consensus 158 ~~~~-------~~~~~~id~~~l~~~l~~~---~~~~v~~~~~~~~---~~~---~l~~i~~la~~~g~~lvvD~a~~~g 221 (358)
+++- +.-.+.+|+++|++++.++ ++++|+++.++|+ .+. ++++|.++|++||+++|+|+||..+
T Consensus 144 ~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e 223 (460)
T PRK13238 144 VIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAE 223 (460)
T ss_pred eccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhh
Confidence 3321 0012459999999999752 5788888877765 233 4789999999999999999998653
Q ss_pred -hhhc-----cccCCC--------CCcccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCC--
Q 018318 222 -LVAA-----QEAANP--------FEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFP-- 285 (358)
Q Consensus 222 -~~~~-----~~~~~~--------~~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 285 (358)
+.+. +....+ .+.+|++++|++|.+.+|.||+++++++ ++.+.++.....
T Consensus 224 ~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~--------------~l~~~~~~~~~~~~ 289 (460)
T PRK13238 224 NAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDE--------------DLFTECRTLCILYE 289 (460)
T ss_pred hhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChH--------------HHHHHhhhcccccC
Confidence 2221 101111 1258999999999988899999999864 566666544211
Q ss_pred C--CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCCC
Q 018318 286 S--LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL 353 (358)
Q Consensus 286 ~--~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~~ 353 (358)
+ +.++.....+.|++.++.....+ .+.+...+++++|.+.|.+.|+++.. +..+|.+++|++..
T Consensus 290 g~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~~~~~~~~l~~~L~~~G~~~~~-p~Gg~~v~~d~~~~ 355 (460)
T PRK13238 290 GFPTYGGLAGRDMEALAVGLYEGMDE---DYLAYRIGQVEYLGEGLEEAGVPIQT-PAGGHAVFVDAGKF 355 (460)
T ss_pred CcccccCcHHHHHHHHHhhHHHhhCh---HHHHHHHHHHHHHHHHHHHCCCCeEc-cCCceEEEEEchhc
Confidence 1 23444444466777777654432 44445556789999999999999986 57889999999753
No 32
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.92 E-value=2.2e-23 Score=199.23 Aligned_cols=251 Identities=20% Similarity=0.221 Sum_probs=175.8
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHD 122 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd 122 (358)
+|+|.+++.+.+.. ++.+++++++..|. +...++| +.+++++|.+. .+++++|++|+..++.++++|||
T Consensus 54 ~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~~~~a~~~~~~~l~~~gd 123 (393)
T TIGR01822 54 HPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYASCFDANGGLFETLLGAED 123 (393)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECchHHHHHHHHHHhCCCCC
Confidence 78999999888753 44577788877673 4445565 78999999865 36678889999999999999999
Q ss_pred eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-----CCcEEEEcCCC--CCCc
Q 018318 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPKLIICGGSA--YPRD 195 (358)
Q Consensus 123 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~-----~~~~v~~~~~~--~~~~ 195 (358)
+|++..++|.++.. .+.+.+.. .+.+ ..+|++++++++++. ++++|++++.. +|..
T Consensus 124 ~vi~~~~~~~s~~~---------~~~~~~~~--~~~~------~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~ 186 (393)
T TIGR01822 124 AIISDALNHASIID---------GVRLCKAK--RYRY------ANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVI 186 (393)
T ss_pred EEEEeccccHHHHH---------HHHhcCCc--eEEe------CCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCc
Confidence 99999988876542 12233322 1222 258999999998752 56777766433 4567
Q ss_pred cchHHHHHHHHHhCCEEEEechhhhhhhhccccC----CCCC-cccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCC
Q 018318 196 WDYARFRAVADKCGALLLCDMAHISGLVAAQEAA----NPFE-YCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEG 270 (358)
Q Consensus 196 ~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~----~~~~-~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~ 270 (358)
.|+++|.++|++||+++++|++|+.|........ ..+. ++|++++|+||+|+|+++|+++++++
T Consensus 187 ~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~~~~----------- 255 (393)
T TIGR01822 187 APLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTARKE----------- 255 (393)
T ss_pred CCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEeCHH-----------
Confidence 8999999999999999999999987765321100 1122 67999999999998899999988773
Q ss_pred ccccHHHHhhhhcCCC-CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 271 AVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 271 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
+.+.+.....+. ..++.....++++.++++.+. +.+...+++.++++++++.|++.|+++..
T Consensus 256 ----~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 318 (393)
T TIGR01822 256 ----VVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAGFDIKP 318 (393)
T ss_pred ----HHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 444444321122 122333344444555665442 34566788999999999999988887653
No 33
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.92 E-value=2.1e-23 Score=199.62 Aligned_cols=291 Identities=16% Similarity=0.148 Sum_probs=187.1
Q ss_pred ceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHH
Q 018318 33 GIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (358)
Q Consensus 33 ~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~ 112 (358)
.+..+++.+++|+.|++++.+.+.... ..++..|. ......++.+++++.+++++|+++++ .++..+++.++..
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~l~~~ia~~~~~~~~~---v~~~~~~t~~l~~ 92 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSN--ANRGGAYE-SSRRADQVVDDAREAVADLLNADPPE---VVFGANATSLTFL 92 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcC--CCCCCCch-HHHHHHHHHHHHHHHHHHHcCCCCCe---EEEeCCHHHHHHH
Confidence 344557788899999999988775432 11211111 11122223346678999999998642 2333444567666
Q ss_pred HHHhh---cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 113 AYTAV---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 113 ~l~a~---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
++.++ ++|||+|+++.++|.+++.... ..++..|+.+.. ++.+.+++.+|++++++++.+ ++++|++++
T Consensus 93 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~-----~~~~~~g~~~~~--~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~ 164 (397)
T TIGR01976 93 LSRAISRRWGPGDEVIVTRLDHEANISPWL-----QAAERAGAKVKW--ARVDEATGELHPDDLASLLSP-RTRLVAVTA 164 (397)
T ss_pred HHHHHHhcCCCCCEEEEcCCchHhHHHHHH-----HHHHhcCCEEEE--EeccccCCCcCHHHHHHhcCC-CceEEEEeC
Confidence 65554 6899999999988876542110 012345654444 444433578999999999965 688888877
Q ss_pred CCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCeeEEEEeCCCCC-CC
Q 018318 190 SAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRAGMIFYRKGPKP-PK 264 (358)
Q Consensus 190 ~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~gG~i~~~~~~~~-~~ 264 (358)
+++ |...|+++|+++|++||+++++|++|+.|.. +.++. ++|++++|+||++ ||+.|+++++++..+ +.
T Consensus 165 ~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~~G~l~~~~~~~~~l~ 238 (397)
T TIGR01976 165 ASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHG-----LIDVQATGADFLTCSAYKFF-GPHMGILWGRPELLMNLP 238 (397)
T ss_pred CCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcccc-----CCCHHHcCCCEEEEechhhc-CCceEEEEEcHHHHhhCC
Confidence 655 4678999999999999999999999976532 12232 7899999999987 688899998875321 11
Q ss_pred CCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH--------------HHHHHHHHHHHHHHHHHHHh
Q 018318 265 KGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA--------------FKAYAKQVKANAVALGNYLT 330 (358)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~--------------~~~~~~~~~~~~~~l~~~L~ 330 (358)
+... .+ ...........|+++...++++.+|++.+...+ ++...++..+.++++++.|+
T Consensus 239 ~~~~-----~~--~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~ 311 (397)
T TIGR01976 239 PYKL-----TF--SYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLS 311 (397)
T ss_pred Cccc-----cC--ccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 1000 00 000000011235677777888888887764321 45567777888999999999
Q ss_pred hCC-ceeeeC---CCcceEEEEEc
Q 018318 331 GKG-YSLVTG---GTENHLVLWDL 350 (358)
Q Consensus 331 ~~G-~~~~~~---~~~~~~~~v~~ 350 (358)
+.+ ++++.+ ...++++.+.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~ 335 (397)
T TIGR01976 312 DLPGVTLYGVARLAARVPTVSFTV 335 (397)
T ss_pred cCCCEEEeCCCCccCCCceEEEEe
Confidence 875 888753 13556666554
No 34
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.92 E-value=2.2e-23 Score=201.07 Aligned_cols=281 Identities=15% Similarity=0.073 Sum_probs=188.4
Q ss_pred eccCCCCCHHHHHHHhcccccCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHhcCCCC-CCCCccccccCChHHHHHHH
Q 018318 37 IASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLDP-TQWGVNVQPYSGSPANFAAY 114 (358)
Q Consensus 37 ~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~-~~~~~~v~~~sGt~a~~~~l 114 (358)
.++.+++|+.|++++.+++...+. ++.. .++.+......++ .+|+.+++++|++. ++ +++++++|+++..++
T Consensus 38 ~a~~~~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~~~~~~~~---v~~t~g~t~al~~i~ 111 (424)
T PLN02855 38 NAATSQKPAAVLDALQDYYEEYNS--NVHRGIHALSAKATDAYE-LARKKVAAFINASTSRE---IVFTRNATEAINLVA 111 (424)
T ss_pred CccccCCCHHHHHHHHHHHHhcCC--CCCCccchHHHHHHHHHH-HHHHHHHHHcCCCCCCE---EEEeCCHHHHHHHHH
Confidence 356778899999999887754332 2211 2222233444454 67899999999964 32 244445567888887
Q ss_pred Hh----hcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 018318 115 TA----VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS 190 (358)
Q Consensus 115 ~a----~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~ 190 (358)
.+ .+++||+|+++.++|++.+.... ...+..|..+. .++++. ++.+|++++++++.+ ++++|+++++
T Consensus 112 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~-----~~a~~~g~~v~--~v~~~~-~~~~~~~~l~~~i~~-~t~lv~i~~~ 182 (424)
T PLN02855 112 YTWGLANLKPGDEVILSVAEHHSNIVPWQ-----LVAQKTGAVLK--FVGLTP-DEVLDVEQLKELLSE-KTKLVATHHV 182 (424)
T ss_pred HHhhhhcCCCcCEEEECCCccHHHHHHHH-----HHHHHcCCEEE--EEecCC-CCCcCHHHHHHHhcc-CceEEEEeCc
Confidence 65 36899999999998876542110 01133455444 444442 456999999999975 7899988776
Q ss_pred CC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC-CC
Q 018318 191 AY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PK 264 (358)
Q Consensus 191 ~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~ 264 (358)
+| |...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+|| +.||.| |+++.+++..+ +.
T Consensus 183 ~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~~~ 256 (424)
T PLN02855 183 SNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHM-----PVDVQTLGADFLVASSHK-MCGPTGIGFLWGKSDLLESMP 256 (424)
T ss_pred cccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCc-----CCCchhcCCCEEEeeccc-ccCCCccEEEEEchhhhhcCC
Confidence 54 4678999999999999999999999987643 22343 78999999999 567887 99998876432 22
Q ss_pred C---CCCCCc-cccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceeee
Q 018318 265 K---GQPEGA-VYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVT 338 (358)
Q Consensus 265 ~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~ 338 (358)
+ ++.... .+.....+.........|+++...++++.++++.+.+.+++++.++..+.++++++.|+++ |++++.
T Consensus 257 p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~ 335 (424)
T PLN02855 257 PFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYG 335 (424)
T ss_pred CEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 1 111110 0000000000000112467788888999999988765567888899999999999999887 899885
No 35
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=2.3e-23 Score=197.90 Aligned_cols=292 Identities=18% Similarity=0.164 Sum_probs=188.1
Q ss_pred cCC-CCCHHHHHHHhcccccCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHh
Q 018318 39 SEN-FTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (358)
Q Consensus 39 ~~~-~~~~~V~~a~~~~~~~~~~~g~~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a 116 (358)
+.. ++|+.|++++.+.+.... +.++. .+.........+ +++++++++++|++..+ ..++++++++++..++.+
T Consensus 7 ~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~--~v~~~~g~t~al~~~~~~ 81 (376)
T TIGR01977 7 ATTYPKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREV-EETRQLLAKLFNAPSSA--HVVFTNNATTALNIALKG 81 (376)
T ss_pred ccCCCCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHH-HHHHHHHHHHhCcCCCC--eEEEeCCHHHHHHHHHHh
Confidence 344 467899999887765321 11111 111111112223 35668999999987531 124445667899999999
Q ss_pred hcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CC
Q 018318 117 VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAY--PR 194 (358)
Q Consensus 117 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~--~~ 194 (358)
++++||+|++..++|+++..... ...+..|.. ++.++.+ .++.+|++++++++++ ++++|+++++++ |.
T Consensus 82 ~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 82 LLKEGDHVITTPMEHNSVARPLE-----CLKEQIGVE--ITIVKCD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGT 152 (376)
T ss_pred ccCCCCEEEECcchhhHHHHHHH-----HHHHHcCcE--EEEEecC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccc
Confidence 89999999999887765431110 011223544 4444444 3578999999999965 788888876654 46
Q ss_pred ccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCC--CCCCCCCC
Q 018318 195 DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK--PPKKGQPE 269 (358)
Q Consensus 195 ~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~--~~~~~~~~ 269 (358)
..|+++|.++|+++|+++++|++|+.|... .++. ++|++++|+|||+.||.| |+++.+++.. ....++..
T Consensus 153 ~~~~~~i~~l~~~~~~~livD~a~~~g~~~-----~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~ 227 (376)
T TIGR01977 153 ILPIEEIGELAQENGIFFILDAAQTAGVIP-----IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTG 227 (376)
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhccCccC-----CCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCc
Confidence 789999999999999999999999988643 2232 899999999999999987 7777666431 11111111
Q ss_pred CccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCC---CcceE
Q 018318 270 GAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGG---TENHL 345 (358)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~---~~~~~ 345 (358)
.....+ ............++++...++++.++++.+.+.+.+.+.++..++++++++.|.+. |++++.+. ...++
T Consensus 228 ~~~~~~-~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 306 (376)
T TIGR01977 228 SHSALI-DQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGV 306 (376)
T ss_pred cccccc-cccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCe
Confidence 100000 00000000111356677778888889988766566788899999999999999875 78887531 12445
Q ss_pred EEEEc
Q 018318 346 VLWDL 350 (358)
Q Consensus 346 ~~v~~ 350 (358)
+++.+
T Consensus 307 v~~~~ 311 (376)
T TIGR01977 307 VSFTV 311 (376)
T ss_pred EEEEE
Confidence 55554
No 36
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.92 E-value=3e-23 Score=181.03 Aligned_cols=295 Identities=18% Similarity=0.121 Sum_probs=206.3
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~ 113 (358)
..|.+++..+|++|++||..... |+. .+++...+ +++.+-++..|.+..+. .+++.++|+.++..+
T Consensus 19 ~L~gPGPsnl~~~V~~A~~~~~l-----gh~------sPe~~qIm-~~v~egikyVFkT~n~~--tf~isgsGh~g~E~a 84 (385)
T KOG2862|consen 19 TLLGPGPSNLSGRVQEAMSRPSL-----GHM------SPEFVQIM-DEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAA 84 (385)
T ss_pred eeecCCCcCCCHHHHHhhcCCcc-----ccC------CHHHHHHH-HHHHHHHHHHhccCCCc--eEEEecCCcchHHHH
Confidence 37889999999999999976543 222 23555444 46678899999987753 357778899999999
Q ss_pred HHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC--CC
Q 018318 114 YTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG--SA 191 (358)
Q Consensus 114 l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~--~~ 191 (358)
+.+++.|||+|++... |.++.... ...+..|+++.+++.+. ...+.++.+++++.+|+|++|++++ ++
T Consensus 85 l~N~lePgd~vLv~~~---G~wg~ra~----D~~~r~ga~V~~v~~~~---G~~~~le~i~~~lsqh~p~~vfv~hgdsS 154 (385)
T KOG2862|consen 85 LVNLLEPGDNVLVVST---GTWGQRAA----DCARRYGAEVDVVEADI---GQAVPLEEITEKLSQHKPKAVFVTHGDSS 154 (385)
T ss_pred HHhhcCCCCeEEEEEe---chHHHHHH----HHHHhhCceeeEEecCc---ccCccHHHHHHHHHhcCCceEEEEecCcc
Confidence 9999999999998662 33322210 01234577666665543 4689999999999999999998765 55
Q ss_pred CCCccc-hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC-C-CC
Q 018318 192 YPRDWD-YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-P-KK 265 (358)
Q Consensus 192 ~~~~~~-l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~-~~ 265 (358)
++..+| ++.+.++||+|+++++||...++|.. +.-++ ++|+.....+|.+++|.| +.+..++.... + ++
T Consensus 155 TgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt-----~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~r 229 (385)
T KOG2862|consen 155 TGVLQDLLAISGELCHKHEALLLVDTVASLGGT-----EFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDR 229 (385)
T ss_pred ccccchHHHHHHHHhhcCCeEEEEechhhcCCc-----cceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhc
Confidence 676778 78899999999999999998776632 22334 899999999999999999 77666653221 1 12
Q ss_pred CCCCCc-cccHHHHhhhhcCC----CCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCC
Q 018318 266 GQPEGA-VYDFEDKINFAVFP----SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (358)
Q Consensus 266 ~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~ 340 (358)
.++... .+++.+........ ....++++..+.++-+||..+.++++++.++|+++++++++..|.+.|++.....
T Consensus 230 K~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~ 309 (385)
T KOG2862|consen 230 KTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVD 309 (385)
T ss_pred cCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecC
Confidence 222221 12333322221111 1234667778889999999888788899999999999999999999998876521
Q ss_pred --CcceEEEEEcCCCCCCC
Q 018318 341 --TENHLVLWDLRPLGLTG 357 (358)
Q Consensus 341 --~~~~~~~v~~~~~~~~~ 357 (358)
...+.+.-..-|.|++.
T Consensus 310 e~~rlptvttv~vp~gvDw 328 (385)
T KOG2862|consen 310 EELRLPTVTTVKVPYGVDW 328 (385)
T ss_pred hhhccCcceeeecCCCCCH
Confidence 23333333334666654
No 37
>PRK02948 cysteine desulfurase; Provisional
Probab=99.92 E-value=1.5e-23 Score=199.65 Aligned_cols=266 Identities=14% Similarity=0.123 Sum_probs=186.1
Q ss_pred EeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC-hHHHHHHH
Q 018318 36 LIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SPANFAAY 114 (358)
Q Consensus 36 l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG-t~a~~~~l 114 (358)
..++.+++|+.|++++.+++...+ +++++.+..+..+.+.+ +.+++.+++++|++++ .|++++| ++++..++
T Consensus 5 d~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~ 77 (381)
T PRK02948 5 DYAATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSLL-QVCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAI 77 (381)
T ss_pred cCCCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHH-HHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHH
Confidence 346778899999999988775433 33333343444444445 4678999999998764 2445555 77888888
Q ss_pred Hhhc----CCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 018318 115 TAVL----EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS 190 (358)
Q Consensus 115 ~a~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~ 190 (358)
.+++ ++||+|++...+|+++.... ..++..|..+..+ +.+ +++.+|++++++++++ ++++|+++++
T Consensus 78 ~~~~~~~~~~g~~vv~~~~~h~s~~~~~------~~~~~~g~~v~~v--~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~ 147 (381)
T PRK02948 78 QSLLNALPQNKKHIITTPMEHASIHSYF------QSLESQGYTVTEI--PVD-KSGLIRLVDLERAITP-DTVLASIQHA 147 (381)
T ss_pred HHHHHhccCCCCEEEECCcccHHHHHHH------HHHHhCCCEEEEE--eeC-CCCCCCHHHHHHhcCC-CCEEEEEECC
Confidence 7774 57899999888877654221 1223356544444 444 3578999999999864 6788888877
Q ss_pred CCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCC--CC
Q 018318 191 AYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK--PP 263 (358)
Q Consensus 191 ~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~--~~ 263 (358)
+++ ...|+++|.++|+++|+++++|++|+.|... ..+. ++|++++|+||++ ||.| |+++.+++.. ..
T Consensus 148 ~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~-----~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~ 221 (381)
T PRK02948 148 NSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLP-----IDVFEMGIDSLSVSAHKIY-GPKGVGAVYINPQVRWKPV 221 (381)
T ss_pred cCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccc-----cCcccCCCCEEEecHHhcC-CCCcEEEEEEcCCCCCCCc
Confidence 654 6789999999999999999999998877432 2232 7899999999965 6887 8888876521 00
Q ss_pred CCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 264 KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
.+++ ... .....++++...++++.++++... ++.++.++++.++++++++.|++.|+++..
T Consensus 222 ~~~~-----------~~~--~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~ 282 (381)
T PRK02948 222 FPGT-----------THE--KGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEV 282 (381)
T ss_pred ccCC-----------CCC--CCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 0000 000 111235667778888888887754 356788899999999999999999987664
No 38
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.92 E-value=6.1e-23 Score=196.82 Aligned_cols=297 Identities=14% Similarity=0.110 Sum_probs=192.3
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~ 112 (358)
+.-+++.+++|+.|.+++.+.+...+ +++.. .++.+..+...++ ++++.+++++|++..+ ..++++++++++..
T Consensus 21 yld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~~~~~~~--~v~~~~g~t~~l~~ 95 (403)
T TIGR01979 21 YLDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYE-AVREKVAKFINAASDE--EIVFTRGTTESINL 95 (403)
T ss_pred EEeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHH-HHHHHHHHHhCcCCCC--eEEEeCCHHHHHHH
Confidence 34446777889999999987765544 22221 1111223333454 6779999999998321 12444445678887
Q ss_pred HHHhh----cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 113 AYTAV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 113 ~l~a~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++.++ +++||+|+++.++|.+.+.... ......|..+..+ +.+ +++.+|++++++++.+ ++++|+++
T Consensus 96 ~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~-----~~~~~~g~~~~~v--~~~-~~~~~~~~~l~~~i~~-~~~lv~~~ 166 (403)
T TIGR01979 96 VAYSWGDSNLKAGDEIVISEMEHHANIVPWQ-----LLAERTGATLKFI--PLD-DDGTLDLDDLEKLLTE-KTKLVAIT 166 (403)
T ss_pred HHHHhhhhcCCCCCEEEECcchhhHHHHHHH-----HHHHhcCcEEEEE--ecC-CCCCCCHHHHHHHhcc-CCeEEEEE
Confidence 77764 5789999999988876542110 0122456544444 444 4678999999999965 78988887
Q ss_pred CCCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC-
Q 018318 189 GSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP- 262 (358)
Q Consensus 189 ~~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~- 262 (358)
++++ |...|+++|.++|++||+++++|++|+.|... .++. ++|++++|+||++ ||.| |+++.+++..+
T Consensus 167 ~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~-----~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~ 240 (403)
T TIGR01979 167 HVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP-----VDVQALDCDFYVFSGHKMY-GPTGIGVLYGKEELLEQ 240 (403)
T ss_pred cccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccc-----cCccccCCCEEEEeccccc-CCCCceEEEEchHHHhc
Confidence 6654 56789999999999999999999999877532 2232 7899999999975 6887 99988775322
Q ss_pred CCC---CCCCCccccHHH-HhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceee
Q 018318 263 PKK---GQPEGAVYDFED-KINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLV 337 (358)
Q Consensus 263 ~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~ 337 (358)
+.+ ++.....+.... ...........|+++...++++..+++.+...+++.+.++..+.++++++.|++. |++++
T Consensus 241 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~ 320 (403)
T TIGR01979 241 MPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIY 320 (403)
T ss_pred CCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 211 111110000000 0000000112356777778888888887654456788899999999999999887 89887
Q ss_pred eCCC---cceEEEEEc
Q 018318 338 TGGT---ENHLVLWDL 350 (358)
Q Consensus 338 ~~~~---~~~~~~v~~ 350 (358)
.+.. .++++.+.+
T Consensus 321 ~~~~~~~~~~~v~~~~ 336 (403)
T TIGR01979 321 GPRDAEDRGGIISFNV 336 (403)
T ss_pred CCCCccccCceEEEEe
Confidence 6321 244555554
No 39
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=3.6e-23 Score=196.80 Aligned_cols=268 Identities=17% Similarity=0.194 Sum_probs=184.9
Q ss_pred eccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHh
Q 018318 37 IASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (358)
Q Consensus 37 ~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a 116 (358)
.++.+++|+.|++++.+++...+ ++++..+..+..+...+ +++++++++++|+++++ .+++++||+++..++.+
T Consensus 5 ~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~r~~la~~~g~~~~~---i~~t~~~t~a~~~al~~ 78 (379)
T TIGR03402 5 NNATTRVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAV-EEAREQVAKLLGAEPDE---IIFTSGGTESDNTAIKS 78 (379)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHH-HHHHHHHHHHhCCCCCe---EEEeCcHHHHHHHHHHH
Confidence 46778899999999988875433 45543222222344445 47889999999998642 34455677899888877
Q ss_pred hc---CCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 018318 117 VL---EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAY- 192 (358)
Q Consensus 117 ~~---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~- 192 (358)
++ .+||+|++...+|+++...+ ..+...|..+. .++.+ .++.+|++++++++++ ++++|+++++++
T Consensus 79 ~~~~~~~~~~vv~~~~~~~s~~~~~------~~~~~~G~~v~--~v~~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~ 148 (379)
T TIGR03402 79 ALAAQPEKRHIITTAVEHPAVLSLC------QHLEKQGYKVT--YLPVD-EEGRLDLEELRAAITD-DTALVSVMWANNE 148 (379)
T ss_pred HHHhcCCCCeEEEcccccHHHHHHH------HHHHHcCCEEE--EEccC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCC
Confidence 63 45788888888876654221 11222455444 44444 3578999999999975 788888776654
Q ss_pred -CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCCCCCCCC
Q 018318 193 -PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQP 268 (358)
Q Consensus 193 -~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~~~~~~~ 268 (358)
|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+|| +.||.| |+++.+++.. +.+.
T Consensus 149 tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~-~~p~-- 219 (379)
T TIGR03402 149 TGTIFPIEEIGEIAKERGALFHTDAVQAVGKI-----PIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTR-FRPL-- 219 (379)
T ss_pred eeecccHHHHHHHHHHcCCEEEEECccccccc-----ccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCC-CCCc--
Confidence 4678999999999999999999999987743 23333 89999999999 678988 8988876521 1100
Q ss_pred CCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh-C-Cceeee
Q 018318 269 EGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG-K-GYSLVT 338 (358)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-G~~~~~ 338 (358)
+ .-..... ....|+++...+.++.++++.+. ..++...++..++++++++.|.+ . |+++..
T Consensus 220 -~----~g~~~~~---~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~ 282 (379)
T TIGR03402 220 -L----RGGHQER---GRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNG 282 (379)
T ss_pred -c----cCCccCC---CcCCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeC
Confidence 0 0000000 01135678888888888888765 35677778899999999999985 4 777765
No 40
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.91 E-value=2.1e-23 Score=191.96 Aligned_cols=204 Identities=19% Similarity=0.227 Sum_probs=156.8
Q ss_pred cceeEec-cCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHH
Q 018318 32 RGIELIA-SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN 110 (358)
Q Consensus 32 ~~~~l~a-~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~ 110 (358)
+.+-|.. +.++++++|++||..++...+ ++|.++ +.+.+....+| ++|+.+|+++|+++.+ ++++.++|+++
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~-~y~w~~~~~~E-~aR~~VAklInAd~~d---IiFts~ATEs~ 115 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSR-SYGWKAEDAVE-AAREQVAKLINADPSD---IVFTSGATESN 115 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCcc-ccchhhhHHHH-HHHHHHHHHhCCCCCc---EEEeCCchHHH
Confidence 4555554 567889999999999887655 677766 23455566687 6899999999999963 24455567899
Q ss_pred HHHHHhh-cCCCC----eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEE
Q 018318 111 FAAYTAV-LEPHD----RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI 185 (358)
Q Consensus 111 ~~~l~a~-~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v 185 (358)
.+++..+ +.++| .|+++..+|.++.... ..++-.| +++..+++. +++.+|.+.+++.|+. +|++|
T Consensus 116 Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~------~~l~~~g--~~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv 185 (428)
T KOG1549|consen 116 NLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC------RALQEEG--LEVTYLPVE-DSGLVDISKLREAIRS-KTRLV 185 (428)
T ss_pred HHHHHHhhccccccccceEEEecccCcchhHHH------HHHHhcC--eEEEEeccC-ccccccHHHHHHhcCC-CceEE
Confidence 9999988 76788 8999998888654211 1223345 455555555 5789999999999986 89999
Q ss_pred EEcCCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeC
Q 018318 186 ICGGSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRK 258 (358)
Q Consensus 186 ~~~~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~ 258 (358)
.+.+.+ .+..+|+++|.++|++.|+.+++|+||+.|.+ +.++. ++|++++++|||+ ||+| |++++++
T Consensus 186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i-----~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKI-----PVDVQELNADFLSISAHKIY-GPPGIGALYVRR 257 (428)
T ss_pred EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCc-----cccHHHcCchheeeeccccc-CCCcceEEEEcc
Confidence 776543 44678999999999999999999999999875 34454 8999999999986 6775 9999987
No 41
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=2.2e-22 Score=190.86 Aligned_cols=288 Identities=17% Similarity=0.118 Sum_probs=198.5
Q ss_pred cceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
+.+.|..++. ..|+.+.+++...+..... .|. ......+|.+.+.+++.+.+|.+.+.- ..|+.|+|+ +
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~------~~~G~~~LReaia~~~~~~~~~~~~~~-~eiivt~Ga~~ 100 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYT------PSAGIPELREAIAEKYKRRYGLDVDPE-EEIIVTAGAKE 100 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCC------CCCCCHHHHHHHHHHHHHHhCCCCCCC-CeEEEeCCHHH
Confidence 3677777654 4588899999887754311 222 123344666777889999988543110 225566665 6
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
|+..++.++++|||+|+++.|.|..+.. .+.+.|+....+++..+..++.+|++++++++.+ ++|+|+++
T Consensus 101 al~~~~~a~~~pGDeVlip~P~Y~~y~~---------~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln 170 (393)
T COG0436 101 ALFLAFLALLNPGDEVLIPDPGYPSYEA---------AVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILN 170 (393)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcCHHH---------HHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEe
Confidence 9999999999999999999998876542 3456776555555432213689999999999987 89999999
Q ss_pred CCCCCC-----ccchHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCCCC--c---ccEEEecCCccC--CCCCeeEEE
Q 018318 189 GSAYPR-----DWDYARFRAVADKCGALLLCDMAHISGLVAAQE-AANPFE--Y---CHIVTTTTHKSL--RGPRAGMIF 255 (358)
Q Consensus 189 ~~~~~~-----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~~~--~---~d~~~~s~~K~l--~g~~gG~i~ 255 (358)
.|+||+ ...+++|+++|++||+++|+|++ +.++++.+. ....+. . .-+.+.|++|.+ .|+|.||++
T Consensus 171 ~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi-Y~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v 249 (393)
T COG0436 171 SPNNPTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVV 249 (393)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh-hhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEee
Confidence 999884 33589999999999999999999 678887663 333332 2 237788999974 789999999
Q ss_pred EeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHhhC-C
Q 018318 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAST-PAFKAYAKQVKANAVALGNYLTGK-G 333 (358)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-G 333 (358)
++++ ++.+.+.+..... ..+++.....+...||..-.. ...+..++...++++.+.+.|.+. |
T Consensus 250 ~~~~--------------~l~~~~~~~~~~~-~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g 314 (393)
T COG0436 250 GPPE--------------ELIAALRKLKSYL-TSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGG 314 (393)
T ss_pred cChH--------------HHHHHHHHHHHhc-ccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9843 4544444221111 122333333344455543211 233555678899999999999987 5
Q ss_pred ceeeeCCCcceEEEEEcCCC
Q 018318 334 YSLVTGGTENHLVLWDLRPL 353 (358)
Q Consensus 334 ~~~~~~~~~~~~~~v~~~~~ 353 (358)
+++..++..++-+|+++...
T Consensus 315 ~~~~~~p~Ga~Y~~~~i~~~ 334 (393)
T COG0436 315 LSVVKPPEGAFYLFPKIPEL 334 (393)
T ss_pred eeeccCCCeeEEEEeecCCC
Confidence 99887567888899998753
No 42
>PRK07179 hypothetical protein; Provisional
Probab=99.91 E-value=1.5e-22 Score=194.28 Aligned_cols=269 Identities=17% Similarity=0.252 Sum_probs=186.4
Q ss_pred eeEeccCCCC----CHHHHHHHhcccccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChH
Q 018318 34 IELIASENFT----SFAVIEALGSALTNKYSEGMP-GNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (358)
Q Consensus 34 ~~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~-~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~ 108 (358)
+....+++++ +|+|++++.+.+.. ++.+.. ++.+..+.+...+|| +++++++|++. .+++++|++
T Consensus 56 ~~~~~~~~YL~l~~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~sG~~ 125 (407)
T PRK07179 56 AIILQSNDYLNLSGHPDIIKAQIAALQE-EGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES-----CLLCQSGWA 125 (407)
T ss_pred EEEeecCCccCCCCCHHHHHHHHHHHHH-hCCCCCccccccCCchHHHHHH----HHHHHHhCCCc-----EEEECCHHH
Confidence 4555688887 69999999988754 322221 344555556667777 78999999875 366889999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
|+..++.++..+||.|++..+.|.+... .+...|. .++++ ...|+++++++++++++++|+++
T Consensus 126 An~~~l~~l~~~g~~v~~~~~~h~s~~~---------~~~~~g~--~~~~~------~~~d~~~l~~~l~~~~~~lV~v~ 188 (407)
T PRK07179 126 ANVGLLQTIADPNTPVYIDFFAHMSLWE---------GVRAAGA--QAHPF------RHNDVDHLRRQIERHGPGIIVVD 188 (407)
T ss_pred HHHHHHHHhCCCCCEEEEECCcCHHHHH---------HHHHCCC--eEEEe------cCCCHHHHHHHHHhcCCeEEEEC
Confidence 9999999999999999988876654421 1223343 33333 24799999999976457888877
Q ss_pred CCCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccc---c-CCCCC-cccEEEecCCccCCCCCeeEEEEeCCCC
Q 018318 189 GSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQE---A-ANPFE-YCHIVTTTTHKSLRGPRAGMIFYRKGPK 261 (358)
Q Consensus 189 ~~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~---~-~~~~~-~~d~~~~s~~K~l~g~~gG~i~~~~~~~ 261 (358)
.+++ |...|+++|.++|++||+++|+|++|+.|..+... . ...+. .+|++++|+||+++ +++|++++++
T Consensus 189 ~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~--- 264 (407)
T PRK07179 189 SVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPR--- 264 (407)
T ss_pred CCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCH---
Confidence 6554 56789999999999999999999999876532211 0 01122 57999999999985 5789998876
Q ss_pred CCCCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCC
Q 018318 262 PPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (358)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~ 340 (358)
++.+.+.....+.. .++.....++++.++++.+.. ....++++.+++++|++.|.+.|+++..
T Consensus 265 ------------~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g~~v~~-- 328 (407)
T PRK07179 265 ------------ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSELGYNIRS-- 328 (407)
T ss_pred ------------HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCC--
Confidence 34444443222322 233445556666666665532 3456788999999999999999987763
Q ss_pred CcceEEEEEc
Q 018318 341 TENHLVLWDL 350 (358)
Q Consensus 341 ~~~~~~~v~~ 350 (358)
.++++++.+
T Consensus 329 -~~~i~~l~~ 337 (407)
T PRK07179 329 -ESQIIALET 337 (407)
T ss_pred -CCCEEEEEe
Confidence 346666654
No 43
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.91 E-value=5.5e-23 Score=196.96 Aligned_cols=272 Identities=18% Similarity=0.155 Sum_probs=183.8
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~-~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~ 112 (358)
+.-.++.+++|+.|++++..++...+ ++++.+ +..+......+ +.+++.+++++|+++++ .++++++|+++..
T Consensus 6 yld~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~r~~la~~~g~~~~~---v~~~~g~t~a~~~ 79 (402)
T TIGR02006 6 YLDYAATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEAEEAV-ENARNQVAELIGADSRE---IVFTSGATESNNL 79 (402)
T ss_pred EeeCCcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHHHHHH-HHHHHHHHHHhCCCCCe---EEEeCCHHHHHHH
Confidence 34456778899999999988775443 333321 11111112234 46778999999998742 2444555678888
Q ss_pred HHHhh----cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 113 AYTAV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 113 ~l~a~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++.++ .++||+|++..++|.++.... ..+...|.. ++.++.+ .++.+|++++++++++ ++++|+++
T Consensus 80 ~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~------~~~~~~g~~--v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~v~ 149 (402)
T TIGR02006 80 AIKGIAHFYKSKGNHIITSKTEHKAVLDTC------RYLEREGFE--VTYLPPK-SNGLIDLEELKAAIRD-DTILVSIM 149 (402)
T ss_pred HHHHHHHhhcCCCCEEEECCCccHHHHHHH------HHHHhcCCE--EEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEE
Confidence 87665 368999999998887654211 011223544 4444444 3678999999999865 67888877
Q ss_pred CCCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCC-C
Q 018318 189 GSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK-P 262 (358)
Q Consensus 189 ~~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~-~ 262 (358)
++++ |...|+++|.++|+++|+++++|++|+.|... .++. ++|++++|+||++ ||.| |+++.+++.. .
T Consensus 150 ~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~-----~~~~~~~~D~~~~s~~K~~-gp~G~G~l~~~~~~~~~ 223 (402)
T TIGR02006 150 HVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIP-----INVNELKVDLMSISGHKIY-GPKGIGALYVRRKPRVR 223 (402)
T ss_pred CCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcc-----cCccccCCCEEEEehhhhc-CCCceEEEEEccCCCCC
Confidence 6654 46789999999999999999999999887542 2333 7999999999965 7876 8888876421 1
Q ss_pred CCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceeee
Q 018318 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVT 338 (358)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~ 338 (358)
+.+.-... .. . .....++++...++++..+++.+. ++++...++..++++++++.|++. ++++..
T Consensus 224 ~~~~~~g~---~~----~---~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~ 289 (402)
T TIGR02006 224 LEALIHGG---GH----E---RGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNG 289 (402)
T ss_pred CCceecCC---Cc----c---CCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 11100000 00 0 011235677788888889998765 467778889999999999999875 677764
No 44
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.91 E-value=2.7e-22 Score=190.11 Aligned_cols=266 Identities=15% Similarity=0.099 Sum_probs=171.9
Q ss_pred cCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCch------hHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHH
Q 018318 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNE------FIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (358)
Q Consensus 39 ~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~------~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~ 112 (358)
....+..++.+++.++ +.|+.+++...|.. ...++ ++.+++++|++. + +++++|++++..
T Consensus 16 ~~g~~~~~~~~a~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~----~e~lA~~~g~~~----~-~i~~g~~~a~~~ 81 (370)
T TIGR02539 16 RGGVLTEAARKALVEF-----GDGYSVCDFCGGRLDQITKPPIHDF----LEDLAEFLGMDE----A-RVTHGAREGKFA 81 (370)
T ss_pred hCCCCcHHHHHHHHHH-----hhccccccccccccccccchHHHHH----HHHHHHHhCCCc----e-EEECChHHHHHH
Confidence 4556778888887654 33444444333321 23333 367999999986 2 446777889999
Q ss_pred HHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHHhh------cCCcEE
Q 018318 113 AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALD------FRPKLI 185 (358)
Q Consensus 113 ~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~------~~~~~v 185 (358)
++.+++++||+|++..++|.+.+. .++..|+.+.. ++.+. .++.+|++++++++++ .++++|
T Consensus 82 ~~~~l~~~gd~Vl~~~~~h~s~~~---------~~~~~g~~~~~--~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv 150 (370)
T TIGR02539 82 VMHALCKEGDWVVLDGLAHYTSYV---------AAERAGLNVKE--VPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLA 150 (370)
T ss_pred HHHHhhCCCCEEEECCcccHHHHH---------HHHHcCCEEEE--EecCCcccCCcCHHHHHHHHHHhhhccCCCcEEE
Confidence 999999999999998877655431 23456654444 44332 2578999999999864 256788
Q ss_pred EEcCCCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC-C-cccEEEecCCccCCC-CCeeEEEEeCCC
Q 018318 186 ICGGSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-E-YCHIVTTTTHKSLRG-PRAGMIFYRKGP 260 (358)
Q Consensus 186 ~~~~~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~-~-~~d~~~~s~~K~l~g-~~gG~i~~~~~~ 260 (358)
+++++++ |...|+++|.++|+++|+++++|++|+.|... .+. . ++|++++|+||++++ .+.|+++++++
T Consensus 151 ~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~-----~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~- 224 (370)
T TIGR02539 151 LLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP-----VSAKEIGADFIVGSGHKSMAASGPCGVLGMSEE- 224 (370)
T ss_pred EEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC-----CCHHHcCCCEEEeeCcccccCCCCEEEEEECHH-
Confidence 8876654 46779999999999999999999999876321 122 2 689999999999853 23489988774
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCCC-------CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFPS-------LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
+.+.+.....++ ..+++.....++..+++.... +.+. ...+..+++++|++.|++.|
T Consensus 225 --------------~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~l~-~~~~~~~~~~~l~~~L~~~g 288 (370)
T TIGR02539 225 --------------WEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVV-ERVK-RWDEEVKKTRWFVAELEDIG 288 (370)
T ss_pred --------------HHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhCC
Confidence 333332211111 011122222333344444321 2222 23444566789999999999
Q ss_pred ceeee-CCCcceEEEEEcC
Q 018318 334 YSLVT-GGTENHLVLWDLR 351 (358)
Q Consensus 334 ~~~~~-~~~~~~~~~v~~~ 351 (358)
++++. .++.++.+++++.
T Consensus 289 ~~~~~~~~s~t~~v~~~~~ 307 (370)
T TIGR02539 289 FIQLGQKPKEHDLVKFETP 307 (370)
T ss_pred cEEEccCCCcCceEEEECC
Confidence 98753 3467888888763
No 45
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.91 E-value=1.2e-23 Score=193.08 Aligned_cols=223 Identities=17% Similarity=0.118 Sum_probs=156.6
Q ss_pred HHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 161 (358)
+++.+++++|++. +.+.+++++.++..++.++++|||+|++..+.|.+++. .+...|+....++.+.
T Consensus 64 ~~~~~A~~~ga~~----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~---------~~~~~g~~~~~v~~~~ 130 (294)
T cd00615 64 AQELAARAFGAKH----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN---------GLVLSGAVPVYLKPER 130 (294)
T ss_pred HHHHHHHHhCCCC----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH---------HHHHCCCEEEEecCcc
Confidence 4488999999876 33334444679999999999999999999988876541 2345565444443332
Q ss_pred CCC---CCCCCHHHHHHHHhhc-CCcEEEEcCCC-CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC-C-c
Q 018318 162 NSS---TGYIDYDKLEEKALDF-RPKLIICGGSA-YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-E-Y 234 (358)
Q Consensus 162 ~~~---~~~id~~~l~~~l~~~-~~~~v~~~~~~-~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~-~-~ 234 (358)
+.+ .+.+|+++++++++++ ++++|++++++ +|...|+++|.++|+++|+++++|++|+.++.+.+..+... . +
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~ 210 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcC
Confidence 211 1479999999999753 57888777654 45678999999999999999999999986544333333222 2 7
Q ss_pred ccEEEecCCccCCCCCe-eEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHH
Q 018318 235 CHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (358)
Q Consensus 235 ~d~~~~s~~K~l~g~~g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~ 313 (358)
+|++++|+||+++|+++ |++..+++. . . ..++.........++|++..++++..+++.+. .+..+
T Consensus 211 ~div~~S~hK~l~g~~~~~~l~~~~~~---------~---~-~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~-~~g~~ 276 (294)
T cd00615 211 ADIVVQSTHKTLPALTQGSMIHVKGDL---------V---N-PDRVNEALNLHQSTSPSYLILASLDVARAMMA-LEGKE 276 (294)
T ss_pred CcEEEEchhcccchHhHHHHHHhCCCc---------C---C-HHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHH-HHhHH
Confidence 99999999999988865 666665531 0 1 12222222222345788888999988888764 34467
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 018318 314 YAKQVKANAVALGNYLTG 331 (358)
Q Consensus 314 ~~~~~~~~~~~l~~~L~~ 331 (358)
+.++..++++++++.|.+
T Consensus 277 ~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 277 LVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 788899999999998753
No 46
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.91 E-value=2.5e-22 Score=190.36 Aligned_cols=275 Identities=15% Similarity=0.078 Sum_probs=183.0
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~ 113 (358)
..+.+++..+++.|++++.... .++ ..++.+.+ +++++.+++++|+++... ..+++.+|+.++..+
T Consensus 7 ~~~~pgP~~~~~~~~~a~~~~~-~~~-----------~~~~~~~~-~~~~~~l~~l~~~~~~~~-~i~~~~~gt~~l~~~ 72 (368)
T PRK13479 7 LLLTPGPLTTSRTVREAMLRDW-GSW-----------DDDFNALT-ASVRAKLVAIATGEEGYT-CVPLQGSGTFSVEAA 72 (368)
T ss_pred eeecCCCCCCCHHHHHHhCCCC-CCC-----------ChHHHHHH-HHHHHHHHHHhCCCCCce-EEEEcCCcHHHHHHH
Confidence 4678899999999999987654 211 12344444 467899999999964211 234567889999999
Q ss_pred HHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-CCcEEEEcCCCC
Q 018318 114 YTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-RPKLIICGGSAY 192 (358)
Q Consensus 114 l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~-~~~~v~~~~~~~ 192 (358)
+.++..+||+|++..+.+-+. ... ..++..|+.+..++. + .++.+|+++++++++++ ++++|+++++++
T Consensus 73 ~~~l~~~~~~vlv~~~~~~~~---~~~----~~~~~~g~~~~~i~~--~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 142 (368)
T PRK13479 73 IGSLVPRDGKVLVPDNGAYGA---RIA----QIAEYLGIAHVVLDT--G-EDEPPDAAEVEAALAADPRITHVALVHCET 142 (368)
T ss_pred HHhccCCCCeEEEEeCCchHH---HHH----HHHHHcCCcEEEEEC--C-CCCCCCHHHHHHHHHhCCCCcEEEEEcccC
Confidence 999999999998876432111 000 122345655444443 3 24679999999998652 356677776654
Q ss_pred --CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC-CCCC
Q 018318 193 --PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKKG 266 (358)
Q Consensus 193 --~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~~~ 266 (358)
|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+|||+.||.| |+++++++..+ +...
T Consensus 143 ~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~-----~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~ 217 (368)
T PRK13479 143 TTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAI-----PIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGN 217 (368)
T ss_pred ccccccCHHHHHHHHHHcCCEEEEEcccccCCc-----cccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcC
Confidence 4678999999999999999999998876642 22333 789999999999988888 99999875321 1111
Q ss_pred CCCCccccHHHHhhhhcC-CCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 267 QPEGAVYDFEDKINFAVF-PSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
....+ .++......... .....+++...++++.+++..+...+ ++++.+++.++++++++.|+++|++++.
T Consensus 218 ~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 290 (368)
T PRK13479 218 SRSLS-LDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLL 290 (368)
T ss_pred CCCee-ecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 00000 011111110000 00111456677778888888765443 5777889999999999999999998764
No 47
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.91 E-value=6.8e-22 Score=188.99 Aligned_cols=283 Identities=12% Similarity=0.045 Sum_probs=184.7
Q ss_pred CCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCC--CCCCccccccCChHHHHHHHHhh
Q 018318 40 ENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDP--TQWGVNVQPYSGSPANFAAYTAV 117 (358)
Q Consensus 40 ~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~--~~~~~~v~~~sGt~a~~~~l~a~ 117 (358)
.+++.|++.+++...+...+ +++.+ .+ ... ++|+++++|+++++|+++ +++ ..+++++||+||++++.+.
T Consensus 50 tt~~~p~~~~~~~~~l~~~~--~np~s---~~-~~~-~le~~~~~~la~llg~~~~~~~~-~g~~TsGgTEAn~~al~~a 121 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNM--IDKDE---YP-QTA-EIENRCVNMLADLWHAPAKDAEA-VGTSTIGSSEAIMLGGLAM 121 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCC--CCccc---Cc-cHH-HHHHHHHHHHHHHhCCCCCCCCC-eEEEechHHHHHHHHHHHH
Confidence 56778889999888775433 34332 12 223 788899999999999982 233 2233577889999887654
Q ss_pred c--------CCC-----CeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcE
Q 018318 118 L--------EPH-----DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKL 184 (358)
Q Consensus 118 ~--------~~g-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~ 184 (358)
. +.| -.|+++..+|.+.. +.++..|..+ ..+++++.++.+|+++|+++|++ ++.+
T Consensus 122 r~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~---------ka~~~lg~~v--~~i~~d~~~~~vd~~~L~~~i~~-~t~l 189 (431)
T TIGR01788 122 KWRWRKRMEAAGKPTDKPNLVMGSNVQVCWE---------KFARYFDVEL--REVPMDPGRYVIDPEQVVEAVDE-NTIG 189 (431)
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCcchHHHH---------HHHHHcCcee--EEEecCCCceeeCHHHHHHHHhh-CCeE
Confidence 2 112 25777777665543 2233456544 44455542358999999999976 5777
Q ss_pred EEEc--CCCCCCccchHHHHHHHHHh------CCEEEEechhhhhhhh--ccccCCCCC--cccEEEecCCccCCCCCe-
Q 018318 185 IICG--GSAYPRDWDYARFRAVADKC------GALLLCDMAHISGLVA--AQEAANPFE--YCHIVTTTTHKSLRGPRA- 251 (358)
Q Consensus 185 v~~~--~~~~~~~~~l~~i~~la~~~------g~~lvvD~a~~~g~~~--~~~~~~~~~--~~d~~~~s~~K~l~g~~g- 251 (358)
|++. ++.+|.++|+++|+++|+++ |+++++|+||+.++.. .+..+.++. ++|.+++|+|||+.||.|
T Consensus 190 V~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~ 269 (431)
T TIGR01788 190 VVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGV 269 (431)
T ss_pred EEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCc
Confidence 7653 45577899999999999999 9999999999865432 122333333 899999999999878998
Q ss_pred eEEEEeCCC--CC-CCCCCCCCccccHHHHhhhh-cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 018318 252 GMIFYRKGP--KP-PKKGQPEGAVYDFEDKINFA-VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (358)
Q Consensus 252 G~i~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~ 327 (358)
|+++++++. .+ +.... +++... ....+.++......++.+..++.+...++++++++..+++++|.+
T Consensus 270 G~l~~r~~~~l~~~~~~~~---------~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~ 340 (431)
T TIGR01788 270 GWVIWRDEEALPEELIFHV---------NYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAE 340 (431)
T ss_pred EEEEEeChHHcchhheecc---------cccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Confidence 999987741 00 00000 001100 001122222222334456667766667889999999999999999
Q ss_pred HHhhC-CceeeeCCCcceEEEEEcC
Q 018318 328 YLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 328 ~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
.|++. +|+++.+....+++.....
T Consensus 341 ~L~~~~~~el~~~~~~~~iV~Fr~~ 365 (431)
T TIGR01788 341 EIAKLGPFEIISDGSGIPLVAFKLK 365 (431)
T ss_pred HHHhCCCEEEeeCCCCceEEEEEeC
Confidence 99998 5998863234555554443
No 48
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=1.7e-22 Score=191.80 Aligned_cols=247 Identities=15% Similarity=0.137 Sum_probs=169.6
Q ss_pred CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCC
Q 018318 42 FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEP 120 (358)
Q Consensus 42 ~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~ 120 (358)
.++++..+++.+.+.+.+. +. .+...+|| +.+++++|++. .+.++|||.|+.+++.++ ++|
T Consensus 11 ~~~~~e~~~~~~~l~~~~~--------~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~~ 72 (379)
T PRK11658 11 AMGDEELAAVKEVLRSGWI--------TT-GPKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIGP 72 (379)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cC-CHhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCC
Confidence 3456667777766543321 11 24566787 78999999975 366788999999999999 899
Q ss_pred CCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHH
Q 018318 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYAR 200 (358)
Q Consensus 121 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~ 200 (358)
||+|++++++|.+... .+...|+ +++.++++.+++.+|++++++++.+ ++++|+..++ +|.+.|+++
T Consensus 73 Gd~Viv~~~~~~~~~~---------~~~~~G~--~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~~~-~G~~~d~~~ 139 (379)
T PRK11658 73 GDEVITPSLTWVSTLN---------MIVLLGA--TPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPVHY-AGAPADLDA 139 (379)
T ss_pred CCEEEECCCcHHHHHH---------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEeCC-CCCcCCHHH
Confidence 9999999988765431 2334565 4555565544667999999999875 7888875543 677789999
Q ss_pred HHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhh
Q 018318 201 FRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKIN 280 (358)
Q Consensus 201 i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (358)
|.++|++||+++++|++|+.|..+.+...... +.++++++.+|.+.+++||+++++++ ++.++++
T Consensus 140 i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~--------------~~~~~~~ 204 (379)
T PRK11658 140 IRAIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD--------------ELADRLR 204 (379)
T ss_pred HHHHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH--------------HHHHHHH
Confidence 99999999999999999998876544221111 55788888889998889999888753 2222222
Q ss_pred hhcCCC-------------------CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCce
Q 018318 281 FAVFPS-------------------LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYS 335 (358)
Q Consensus 281 ~~~~~~-------------------~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~ 335 (358)
.....+ ..-+. +..+..+.+|+.....+.+++..++.+++++++.+.|++.++.
T Consensus 205 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~-n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~ 277 (379)
T PRK11658 205 SLKFHGLGVDAFDRQTQGRAPQAEVLTPGY-KYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQ 277 (379)
T ss_pred HHHHcCCCcchhhhhcccCCCcceeecccc-ccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 110000 00011 1112344455554444567888899999999999999987643
No 49
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.91 E-value=6.1e-22 Score=180.11 Aligned_cols=308 Identities=19% Similarity=0.115 Sum_probs=200.9
Q ss_pred cccccccchHHHHHHHHHHHHhhcceeEecc-CC-CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRRQCRGIELIAS-EN-FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRA 86 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~-~~-~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~l 86 (358)
++++.+..+++...+.....+......|-.+ ++ ++|+.|.+++.+....... +.+.+-++- .+|.+..++.+
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~--~qYt~~~G~----p~L~~aL~k~~ 82 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPST--NQYTRGYGL----PQLRKALAKAY 82 (420)
T ss_pred cccccccCCcHHHHHHHHHHhcCCCCcccCCCCCCCCcHHHHHHHHHHhccchh--ccccccCCc----hHHHHHHHHHH
Confidence 5667777777777666644434333335554 33 4578888888877654311 112222332 24445556888
Q ss_pred HHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc-----
Q 018318 87 LQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK----- 160 (358)
Q Consensus 87 a~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 160 (358)
++++|....-- ..|++|+|. +++..++.+++.+||+|++..|.+.+++. ...++|....+++..
T Consensus 83 se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~---------~~~maG~tpv~v~~~~~~g~ 152 (420)
T KOG0257|consen 83 SEFYGGLLDPD-DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIP---------QVVMAGGTPVFVPLKPKEGN 152 (420)
T ss_pred HHHhccccCCc-ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhh---------HHhhcCCcceeecccccccc
Confidence 88888643111 346677775 69999999999999999999988766542 345677655555544
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC-----ccchHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCCC--
Q 018318 161 VNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR-----DWDYARFRAVADKCGALLLCDMAHISGLVAAQE-AANPF-- 232 (358)
Q Consensus 161 ~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~-----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~~-- 232 (358)
..+.++.+|++.++.++.+ +||+|++++|+||+ +..|++|++||++||+++|+|++ +..+++.+. +....
T Consensus 153 ~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDev-Ye~~v~d~~~h~r~asl 230 (420)
T KOG0257|consen 153 VSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEV-YEWLVYDGNKHIRIASL 230 (420)
T ss_pred ccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhH-hHHHhhCCCcceeeecC
Confidence 1134689999999999975 89999999999983 34699999999999999999999 445555443 11111
Q ss_pred C---cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHh-
Q 018318 233 E---YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA- 306 (358)
Q Consensus 233 ~---~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~- 306 (358)
- ..-+.++|++|+| .|++-|++++++.+. .....+... +...-.++ ...|.++|+..-
T Consensus 231 Pgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~------------~~~~~vh~~-~~~~~~Tp---~q~A~a~a~~~~~ 294 (420)
T KOG0257|consen 231 PGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLY------------SALFPVHQN-FVFTCPTP---IQEASAAAFALEL 294 (420)
T ss_pred CchhheEEEeccccceeeeeeeeeeeeechHHhh------------hhHHHHhhc-cccccCcH---HHHHHHHHHhhhh
Confidence 1 3458899999986 588889999965310 011111111 11111112 112222222221
Q ss_pred --ccH---HH-HHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 307 --STP---AF-KAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 307 --~~~---~~-~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
.+. ++ ..+.+.++++++.|.+.|.+.|+++.. +..++-+|+|++
T Consensus 295 ~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~-p~gayyl~adfs 344 (420)
T KOG0257|consen 295 ACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTG-PEGAYYLWADFS 344 (420)
T ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCceEEEEecc
Confidence 111 33 447788999999999999999999986 678999999998
No 50
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.90 E-value=2.2e-22 Score=191.60 Aligned_cols=266 Identities=14% Similarity=0.150 Sum_probs=181.5
Q ss_pred eccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCC-CCCCCCccccccCChHHHHHHHH
Q 018318 37 IASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL-DPTQWGVNVQPYSGSPANFAAYT 115 (358)
Q Consensus 37 ~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~-~~~~~~~~v~~~sGt~a~~~~l~ 115 (358)
+++.+++++.|++++..++...+ +++++.+..+......++ ++++.+++.+|+ ++++ .++++++++++..++.
T Consensus 5 ~aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~-~a~~~~~~~~~~~~~~~---i~~t~g~teal~~~~~ 78 (382)
T TIGR03403 5 NNATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIA-EALDKLYKGINARDLDD---IIITSCATESNNWVLK 78 (382)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHH-HHHHHHHHHcCcCCCCe---EEEeCCHHHHHHHHHH
Confidence 46778889999999988876544 344433333344555676 455667777787 3432 2334445679888887
Q ss_pred hhc-----CC-CCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 116 AVL-----EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 116 a~~-----~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
++. ++ +|+|+++..+|+++.... ..++..|.. ++.++++ +++.+|++++++++.+ ++++|++++
T Consensus 79 ~~~~~~~~~~~~~~vi~~~~e~ps~~~~~------~~~~~~G~~--v~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~ 148 (382)
T TIGR03403 79 GVYFDEILKGGKNHIITTEVEHPAVRATC------AFLESLGVE--VTYLPIN-EQGTITAEQVREAITE-KTALVSVMW 148 (382)
T ss_pred HHHHhhcccCCCCEEEEcCCccHHHHHHH------HHHHHCCCE--EEEEecC-CCCCCCHHHHHHhccc-CCeEEEEEc
Confidence 752 55 468999988887654321 112334554 4444444 3578999999999865 688888876
Q ss_pred CCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC--
Q 018318 190 SAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-- 262 (358)
Q Consensus 190 ~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-- 262 (358)
++|+ ...|+++|.++|+++|+++++|++|+.|... .++. ++|++++|+||+ .||+| |+++.+++..-
T Consensus 149 ~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~-----~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~~p 222 (382)
T TIGR03403 149 ANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIP-----VDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGVELTP 222 (382)
T ss_pred ccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCc-----cCccccCCCEEEEcchhh-CCCCceEEEEECCCCCCCC
Confidence 6654 6789999999999999999999999876432 2332 799999999997 57887 88888775310
Q ss_pred CCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceeee
Q 018318 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVT 338 (358)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~ 338 (358)
...++. ... ....++++...+.++..+++... +..+...++..+.++++.+.|+++ |++++.
T Consensus 223 ~~~g~~---------~~~----~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 285 (382)
T TIGR03403 223 LFHGGE---------HMG----GRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELPDVFVVG 285 (382)
T ss_pred cccCCC---------CCC----CcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEEC
Confidence 000010 000 01135677777878888887654 345677788999999999999885 788875
No 51
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.90 E-value=7.8e-22 Score=186.43 Aligned_cols=269 Identities=13% Similarity=0.037 Sum_probs=172.9
Q ss_pred eccCCCCCHHHHHHHhcccccCCCCCCCCC-CC---CCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHH
Q 018318 37 IASENFTSFAVIEALGSALTNKYSEGMPGN-RY---YGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (358)
Q Consensus 37 ~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~-~~---~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~ 112 (358)
+....++.+++++++.++.. .+ +.+.+ .. ..+.+...+++ +.+++++|++. .++++++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~l~----~~la~~~g~~~-----i~~~~g~t~al~~ 74 (361)
T cd06452 7 IQRGGRLTPEARKALIEWGD-GY--SVCDFCRGRLDEIEKPPIKDFH----HDLAEFLGMDE-----ARVTPGAREGKFA 74 (361)
T ss_pred hhcCCCCCHHHHHHHHHHhc-cc--CCccccccccccccCchHHHHH----HHHHHHcCCce-----EEEeCCHHHHHHH
Confidence 44667889999999987652 22 22211 00 11223444554 78999999943 3445556779999
Q ss_pred HHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhh------cCCcEE
Q 018318 113 AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALD------FRPKLI 185 (358)
Q Consensus 113 ~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~------~~~~~v 185 (358)
++.++++|||+|++..+.|.+.+. .+...|+.+ +.++.+.+ ++.+|++++++++++ .++++|
T Consensus 75 ~l~~~~~~gd~Vl~~~~~~~~~~~---------~~~~~g~~~--~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv 143 (361)
T cd06452 75 VMHSLCEKGDWVVVDGLAHYTSYV---------AAERAGLNV--REVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALA 143 (361)
T ss_pred HHHHhcCCCCEEEEcCCcchHHHH---------HHHhcCCEE--EEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEE
Confidence 999999999999998876654321 234456544 44444422 358999999998863 257888
Q ss_pred EEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC-C-cccEEEecCCccCCCC-CeeEEEEeCCC
Q 018318 186 ICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-E-YCHIVTTTTHKSLRGP-RAGMIFYRKGP 260 (358)
Q Consensus 186 ~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~-~-~~d~~~~s~~K~l~g~-~gG~i~~~~~~ 260 (358)
++++++++ ...|+++|.++|+++|+++++|++|+.|.. +.+. + ++|++++|+||++++| ++|+++++++
T Consensus 144 ~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~- 217 (361)
T cd06452 144 LLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRM-----PVSGKELGADFIVGSGHKSMAASAPIGVLATTEE- 217 (361)
T ss_pred EEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCc-----CCCHHHcCCCEEEecCCccccCCCCeEEEEECHH-
Confidence 88877654 577999999999999999999999886642 1222 2 6899999999998644 5699888764
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCC-------CCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFP-------SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK- 332 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 332 (358)
+.+.+.....+ ...+++....++++.++++... +.-....+..++++++++.|.++
T Consensus 218 --------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~l~ 281 (361)
T cd06452 218 --------------WADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAELEKIE 281 (361)
T ss_pred --------------HHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33333221111 1112222223334445554432 12233455566778999999998
Q ss_pred CceeeeC-CCcceEEEEEc
Q 018318 333 GYSLVTG-GTENHLVLWDL 350 (358)
Q Consensus 333 G~~~~~~-~~~~~~~~v~~ 350 (358)
|++++.. +..++++.++.
T Consensus 282 g~~v~~~~~~~~n~~~~~~ 300 (361)
T cd06452 282 GIKQLGEKPKNHDLMFFET 300 (361)
T ss_pred CeEEECCCCCCCceEEEEc
Confidence 9998742 24555666654
No 52
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.90 E-value=5.8e-23 Score=194.04 Aligned_cols=226 Identities=20% Similarity=0.224 Sum_probs=153.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCCCCeEEEecCCCCccccccccccCCccccccc
Q 018318 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g 151 (358)
+.+.+|| +++++++|.+. .+.++|||.|+++++.++ +++||+|++++.++.+.. ..+...|
T Consensus 25 ~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~---------~ai~~~G 86 (363)
T PF01041_consen 25 PYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATA---------SAILWAG 86 (363)
T ss_dssp HHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHH---------HHHHHTT
T ss_pred HHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHH---------HHHHHhc
Confidence 6677898 77999999887 478899999999999999 889999999997665432 1233455
Q ss_pred ceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCC
Q 018318 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANP 231 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~ 231 (358)
.+++++|++++++.+|++++++++.+ ++++|++. +.+|.+.|+++|.++|+++|++||.|+||+.|..+.+.....
T Consensus 87 --~~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~ 162 (363)
T PF01041_consen 87 --AEPVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGS 162 (363)
T ss_dssp ---EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTS
T ss_pred --cEEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccC
Confidence 46788888878999999999999976 77887755 557777899999999999999999999999997765533222
Q ss_pred CCcccEEEecCC--ccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCc--------CC--C-ChhHHHH
Q 018318 232 FEYCHIVTTTTH--KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQ--------GG--P-HNHQIGA 298 (358)
Q Consensus 232 ~~~~d~~~~s~~--K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~-~~~~~~a 298 (358)
..|+.++|+| |.+.+..||+++++++ ++.++++.....+.. .. + .+..+..
T Consensus 163 --~gd~~~fSf~~~K~i~~geGG~v~~~~~--------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~ 226 (363)
T PF01041_consen 163 --FGDIAIFSFHPTKIITTGEGGAVVTNDP--------------ELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSE 226 (363)
T ss_dssp --SSSEEEEESSTTSSS-SSS-EEEEESTH--------------HHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BH
T ss_pred --CCCceEecCCCCCCCcCCCCeeEEecHH--------------HHHHHhhhhhccCcCccccccccccccCCcccccHH
Confidence 4577777765 9898889999999886 555544432211100 00 0 1111222
Q ss_pred HH--HHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceeee
Q 018318 299 LA--VALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVT 338 (358)
Q Consensus 299 l~--~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~ 338 (358)
+. .++.++ ..++++.++.+++++++.+.|.+. ++....
T Consensus 227 ~~AAigl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~ 267 (363)
T PF01041_consen 227 LQAAIGLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPP 267 (363)
T ss_dssp HHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEG
T ss_pred HHHHHHHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCccccc
Confidence 22 233333 346788888999999999999998 554443
No 53
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.89 E-value=4.5e-21 Score=181.82 Aligned_cols=295 Identities=17% Similarity=0.156 Sum_probs=186.1
Q ss_pred hHHHHHHHHHHHHhhcc-eeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCC
Q 018318 17 PEIHDLIEKEKRRQCRG-IELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPT 95 (358)
Q Consensus 17 ~~~~~~~~~~~~~~~~~-~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~ 95 (358)
+++.+++++..+..... ..+....++++|.+.+++...+.... +.+.. +.+ ...+++.+++++++++|++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~--~~~---~~~~~~~~~~~la~~~g~~~~ 77 (371)
T PRK13520 5 EEILEELEEYRSEDLKYERILSSMCTEPHPIARKAHEMFLETNL--GDPGL--FPG---TAKLEEEAVEMLGELLHLPDA 77 (371)
T ss_pred HHHHHHHHHHHhcCCCHHHeeeeeecCchHHHHHHHHHHHhcCC--CCccc--Ccc---HHHHHHHHHHHHHHHhCCCCC
Confidence 44555555443322111 22444467788999999887775432 22221 122 234456778999999998764
Q ss_pred CCCccccccCChHHHHHHHHhhcC----CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHH
Q 018318 96 QWGVNVQPYSGSPANFAAYTAVLE----PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYD 171 (358)
Q Consensus 96 ~~~~~v~~~sGt~a~~~~l~a~~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~ 171 (358)
. .+++++|++++..++.++.. +||+|++..+.|.++. ..++..|..+..+ +.+ .++.+|++
T Consensus 78 ~---~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~---------~~~~~~g~~~~~v--~~~-~~~~~d~~ 142 (371)
T PRK13520 78 Y---GYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD---------KAADMLGVELRRA--PLD-DDYRVDVK 142 (371)
T ss_pred C---eEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH---------HHHHHcCceEEEe--cCC-CCCcCCHH
Confidence 2 35566788899888776643 5889999887665432 1233456544444 333 35789999
Q ss_pred HHHHHHhhcCCcEEEEcC--CCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCC--CcccEEEecCCcc
Q 018318 172 KLEEKALDFRPKLIICGG--SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPF--EYCHIVTTTTHKS 245 (358)
Q Consensus 172 ~l~~~l~~~~~~~v~~~~--~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~--~~~d~~~~s~~K~ 245 (358)
++++++++ ++++|++.. +.+|...|+++|.++|+++|+++++|++|+.+........ ..+ .++|++++|+|||
T Consensus 143 ~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~ 221 (371)
T PRK13520 143 AVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKM 221 (371)
T ss_pred HHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccc
Confidence 99999975 566555433 3456788999999999999999999999976543211111 122 2789999999998
Q ss_pred CCCC-CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCC--------CcCCCChhHHHHHHHHHHHhccHHHHHHHH
Q 018318 246 LRGP-RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS--------LQGGPHNHQIGALAVALKQASTPAFKAYAK 316 (358)
Q Consensus 246 l~g~-~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~al~~al~~~~~~~~~~~~~ 316 (358)
+.+| ++|+++..++ ++.+.+... .++ ..++++...++++.++++.+...+++++++
T Consensus 222 ~~a~~~~G~~~~~~~--------------~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~ 286 (371)
T PRK13520 222 GLAPIPAGGILFRDE--------------SYLDALAVD-TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVE 286 (371)
T ss_pred cCccCCceEEEEcCH--------------HHHHhhccc-CccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHH
Confidence 6443 4466665443 222222110 011 122334445666777887765556778899
Q ss_pred HHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEc
Q 018318 317 QVKANAVALGNYLTGKGYSLVTGGTENHLVLWDL 350 (358)
Q Consensus 317 ~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~ 350 (358)
+..++++++++.|++.|+++... ...+.+.+++
T Consensus 287 ~~~~~~~~l~~~L~~~g~~~~~~-~~~~~v~~~~ 319 (371)
T PRK13520 287 RCMENTRWLAEELKERGFEPVIE-PVLNIVAFDD 319 (371)
T ss_pred HHHHHHHHHHHHHHhCCCEEecC-CCceEEEEec
Confidence 99999999999999999984332 3345566554
No 54
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.89 E-value=3.2e-21 Score=181.64 Aligned_cols=285 Identities=18% Similarity=0.126 Sum_probs=181.7
Q ss_pred eEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHH
Q 018318 35 ELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAY 114 (358)
Q Consensus 35 ~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l 114 (358)
.|.+++..+++.|++++.... .++ ...+...+ +.+++.+++++|+++... ..+++.+|+.++..++
T Consensus 2 ~~~p~p~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~-~~~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~ 67 (355)
T TIGR03301 2 LLTPGPLSTSATVRDAMLVDW-CHW-----------DSEFNDVT-DQVRDRLLALAGGDDNHT-CVLLQGSGTFAVEATI 67 (355)
T ss_pred cCcCCCCCCCHHHHHHhhhhc-cCC-----------CHHHHHHH-HHHHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHH
Confidence 467889999999999997632 121 11233333 466799999999986421 1235678899999999
Q ss_pred HhhcCCCCeEEEecCC-CCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-CCcEEEEcCCC-
Q 018318 115 TAVLEPHDRIMGLDLP-SGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-RPKLIICGGSA- 191 (358)
Q Consensus 115 ~a~~~~gd~Vl~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~-~~~~v~~~~~~- 191 (358)
.+++++||++++..+. |+..+. ..++..|..+.. ++.+ .++.+|+++++++++++ ++++|++.+++
T Consensus 68 ~~~~~~~~~vi~~~~~~~~~~~~--------~~a~~~g~~~~~--i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 136 (355)
T TIGR03301 68 GSLVPRDGKLLVLINGAYGERLA--------KICEYLGIPHTD--LNFS-EYEPPDLNRIEEALAADPDITHVATVHHET 136 (355)
T ss_pred HhccCCCCeEEEECCCchhhHHH--------HHHHHcCCceEE--EecC-CCCCCCHHHHHHHHHhCCCceEEEEEecCC
Confidence 9998889987765542 322110 112334554443 3433 25689999999999753 34556555443
Q ss_pred -CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCCC-CCCC
Q 018318 192 -YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKKG 266 (358)
Q Consensus 192 -~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~~~ 266 (358)
+|...|+++|.++|++||+++++|++|+.|.. +.++. ++|++++|+||+|.|+.| |+++++++..+ +...
T Consensus 137 ~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~-----~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~ 211 (355)
T TIGR03301 137 TTGILNPLEAIAKVARSHGAVLIVDAMSSFGAI-----PIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGN 211 (355)
T ss_pred cccchhHHHHHHHHHHHcCCEEEEEeccccCCc-----ccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCC
Confidence 45678999999999999999999999876642 22333 789999999999877777 99988775221 1100
Q ss_pred CCCCccccHHHHhhhhc-CCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCceeeeCC-Ccc
Q 018318 267 QPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSLVTGG-TEN 343 (358)
Q Consensus 267 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~-~~~ 343 (358)
.. ..+.++........ ......+++...+.++..+++.+.+.+ +++..++.+++++++++.|++.|+++..+. ..+
T Consensus 212 ~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~ 290 (355)
T TIGR03301 212 AR-SLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQS 290 (355)
T ss_pred CC-CceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCC
Confidence 00 00001111000000 001122455566677778887765444 677888999999999999999999865432 222
Q ss_pred e-EEEEEc
Q 018318 344 H-LVLWDL 350 (358)
Q Consensus 344 ~-~~~v~~ 350 (358)
. ++++.+
T Consensus 291 ~~~~~~~~ 298 (355)
T TIGR03301 291 PIIVSFLY 298 (355)
T ss_pred CcEEEEEC
Confidence 2 456654
No 55
>PRK14012 cysteine desulfurase; Provisional
Probab=99.89 E-value=1.1e-21 Score=188.06 Aligned_cols=268 Identities=18% Similarity=0.186 Sum_probs=177.8
Q ss_pred eEeccCCCCCHHHHHHHhcccc--cCCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHH
Q 018318 35 ELIASENFTSFAVIEALGSALT--NKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (358)
Q Consensus 35 ~l~a~~~~~~~~V~~a~~~~~~--~~~~~g~~~~~-~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~ 111 (358)
.-.++.+++|+.|++++..++. ..+ ++++.+ +..+......++ .+++++++++|+++++ .+++++||+|++
T Consensus 7 ld~a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~g~~~~~---v~~~~g~t~al~ 80 (404)
T PRK14012 7 LDYSATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVD-IARNQIADLIGADPRE---IVFTSGATESDN 80 (404)
T ss_pred ecCcCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHH-HHHHHHHHHcCcCcCe---EEEeCCHHHHHH
Confidence 3446778889999999988775 333 233221 101101112333 5668999999998642 355566678988
Q ss_pred HHHHhh----cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 112 AAYTAV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 112 ~~l~a~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
.++.++ +++||+|++..++|++..... ..+...|.. ++.++.+ .++.+|++++++++.+ ++++|++
T Consensus 81 ~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~------~~~~~~g~~--~~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~ 150 (404)
T PRK14012 81 LAIKGAAHFYQKKGKHIITSKTEHKAVLDTC------RQLEREGFE--VTYLDPQ-SNGIIDLEKLEAAMRD-DTILVSI 150 (404)
T ss_pred HHHHHHHHhhcCCCCEEEEecCccHHHHHHH------HHHHhCCCE--EEEEccC-CCCcCCHHHHHHhcCC-CCEEEEE
Confidence 887765 378999999998887654221 111223554 4444444 3678999999999975 7888887
Q ss_pred cCCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCe-eEEEEeCCCC-
Q 018318 188 GGSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK- 261 (358)
Q Consensus 188 ~~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~~~- 261 (358)
++++ +|...|+++|.++||++|+++++|++|+.|... .++. ++|++++|+||.+ ||.| |+++.+++..
T Consensus 151 ~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~-----~~~~~~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~ 224 (404)
T PRK14012 151 MHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVP-----IDLSKLKVDLMSFSAHKIY-GPKGIGALYVRRKPRV 224 (404)
T ss_pred ECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcc-----cCcccCCCCEEEEehhhcc-CCCceEEEEEecCCCC
Confidence 7655 457789999999999999999999999877542 2232 7899999999954 6766 8888876521
Q ss_pred CCCC--CCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceee
Q 018318 262 PPKK--GQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLV 337 (358)
Q Consensus 262 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~ 337 (358)
++.+ .+. .. . .....++++...+.++.+|++... .+.....++..++++++.+.|++. ++.+.
T Consensus 225 ~~~~~~~g~-----~~----~---~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~ 290 (404)
T PRK14012 225 RLEAQMHGG-----GH----E---RGMRSGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLN 290 (404)
T ss_pred CCCceecCC-----Cc----c---CCccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 1111 000 00 0 001123456666777778877654 345667888899999999999875 56655
No 56
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.89 E-value=2.4e-21 Score=184.28 Aligned_cols=248 Identities=18% Similarity=0.182 Sum_probs=163.8
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCCC
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPH 121 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~g 121 (358)
++++.++++.+.+.+.+ + ..| +...++| +.+++++|.+. .+.+++|+.|+..++.++ ++||
T Consensus 8 ~~~~~~~~v~~~~~~~~---~-----~~g-~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF---L-----TQG-PTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CCHHHHHHHHHHHhcCC---c-----cCC-hhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence 45556666666554322 1 112 3455676 77999999876 366788999999999998 8999
Q ss_pred CeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh---cCCcEEEEcCCCCCCccch
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRPKLIICGGSAYPRDWDY 198 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~---~~~~~v~~~~~~~~~~~~l 198 (358)
|+|++++++|.+.. ..+...|+ ++++++++.+++.+|++++++++++ .++++|++.+. +|...|+
T Consensus 70 d~Viv~~~~~~~~~---------~~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~~-~G~~~~~ 137 (380)
T TIGR03588 70 DRVWTTPITFVATA---------NCALYCGA--KVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF-AGKSVDM 137 (380)
T ss_pred CEEEeCCcchHHHH---------HHHHHcCC--EEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeCC-CCccCCH
Confidence 99999998775432 12334565 4555666545678999999999973 36788776543 6777899
Q ss_pred HHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCC--ccCCCCCeeEEEEeCCCCCCCCCCCCCccccHH
Q 018318 199 ARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH--KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFE 276 (358)
Q Consensus 199 ~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~--K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~ 276 (358)
++|.++|++||+++|+|++|+.|....+......+..|+.++|+| |+++++.||+++++++ ++.
T Consensus 138 ~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~--------------~~~ 203 (380)
T TIGR03588 138 QAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE--------------ELA 203 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccCceEEEECCH--------------HHH
Confidence 999999999999999999999886543311111114599999987 8898788999998764 233
Q ss_pred HHhhhhcCCC---------------------CcC-CCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC-
Q 018318 277 DKINFAVFPS---------------------LQG-GPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG- 333 (358)
Q Consensus 277 ~~~~~~~~~~---------------------~~~-~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G- 333 (358)
++++.....+ ..| +.....+.+ +.++.++ +.++.+.++.+++++++.+.|.+.+
T Consensus 204 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~a-a~g~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~~ 280 (380)
T TIGR03588 204 ERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQA-ALGLSQL--KKLDRFVAKRREIAARYDRLLKDLPY 280 (380)
T ss_pred HHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3222110000 000 011111111 1222232 3467888899999999999999874
Q ss_pred ceee
Q 018318 334 YSLV 337 (358)
Q Consensus 334 ~~~~ 337 (358)
+.+.
T Consensus 281 ~~~~ 284 (380)
T TIGR03588 281 FTPL 284 (380)
T ss_pred ccCC
Confidence 5543
No 57
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.89 E-value=2.5e-21 Score=182.62 Aligned_cols=245 Identities=16% Similarity=0.190 Sum_probs=168.9
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccc
Q 018318 69 YGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 148 (358)
Q Consensus 69 ~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 148 (358)
|.|++...+|| +.+++++|.++ .|.++|||.|++.++...++|||.| +... ++.... .-+.
T Consensus 74 Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~---~f~Tt~-----ahI~ 134 (460)
T PRK13237 74 YAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNM---YFTTTR-----YHQE 134 (460)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCcc---chHhhH-----HHHH
Confidence 45566677898 77899999987 4778999999998766558999975 3322 221110 0122
Q ss_pred cccceeEEeecc---------cCCCCCCCCHHHHHHHHhhcC---CcEEEE--cCCCC-CCcc---chHHHHHHHHHhCC
Q 018318 149 ATSIYFESLPYK---------VNSSTGYIDYDKLEEKALDFR---PKLIIC--GGSAY-PRDW---DYARFRAVADKCGA 210 (358)
Q Consensus 149 ~~g~~~~~~~~~---------~~~~~~~id~~~l~~~l~~~~---~~~v~~--~~~~~-~~~~---~l~~i~~la~~~g~ 210 (358)
..|. .++.+. .++.++.+|+++++++|++.. +++|.+ .++.+ |.+. ++++|.++|++||+
T Consensus 135 ~~Ga--~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl 212 (460)
T PRK13237 135 LNGG--IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGI 212 (460)
T ss_pred hCCc--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCC
Confidence 3343 222111 113468999999999997532 223322 22223 4443 68999999999999
Q ss_pred EEEEechhhhh---hhh---ccccCCC--------CCcccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHH
Q 018318 211 LLLCDMAHISG---LVA---AQEAANP--------FEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFE 276 (358)
Q Consensus 211 ~lvvD~a~~~g---~~~---~~~~~~~--------~~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~ 276 (358)
.||.|+||+.| ++- .+....+ ++.+|.+++|++|.+.++.||+++++++ ++.
T Consensus 213 ~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~--------------eL~ 278 (460)
T PRK13237 213 KVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE--------------ELF 278 (460)
T ss_pred EEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH--------------HHH
Confidence 99999999988 331 1111122 2378999999999998888999999986 677
Q ss_pred HHhhhh--cCCCC--cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 277 DKINFA--VFPSL--QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 277 ~~~~~~--~~~~~--~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
++++.. .+.++ .++.....+.+++.++.+..+ .++.++..+++++|.+.|.+.|+++.. +..+|.++||...
T Consensus 279 ~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~Gvpv~~-p~ggH~v~vda~~ 354 (460)
T PRK13237 279 DEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAAGVPIVE-PVGGHAVFLDARR 354 (460)
T ss_pred HHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHCCCceec-CCCceEEEEEhHH
Confidence 766654 23332 233334567788888877654 277778888999999999999999986 5788999999875
No 58
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.89 E-value=4.2e-21 Score=181.12 Aligned_cols=247 Identities=15% Similarity=0.102 Sum_probs=161.2
Q ss_pred cCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc
Q 018318 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL 118 (358)
Q Consensus 39 ~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~ 118 (358)
+-+++|++|+++|.+.... + .... .+.+++++++++++|++. .++++++|.|++.++.+++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~---------~~~~----~~~~~~~~~~a~~~g~~~-----~~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y---------FEIK----ELVNKTGEYIANLLGVED-----AVIVSSASAGIAQSVAAVI 81 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C---------CCHH----HHHHHHHHHHHHhhCCCe-----EEEEcCHHHHHHHHHHHHh
Confidence 4556799999999877532 2 1111 233445589999999875 2667778899999999999
Q ss_pred CCCC---------------eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCc
Q 018318 119 EPHD---------------RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPK 183 (358)
Q Consensus 119 ~~gd---------------~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~ 183 (358)
++|| +|+++.+.+..+.... . ..+.+.|+ .+++++. ++.+|++++++++.+ +|+
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~--~---~~~~~~g~--~~v~v~~---~~~~d~~~le~ai~~-~t~ 150 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPV--E---TMVRLGGG--KVVEAGY---ANECSAEQLEAAITE-KTA 150 (363)
T ss_pred cCCCcchhhcccccccccceEEEECccchhcCCch--H---HHHHhcCC--eEEEEcC---CCCCCHHHHHHhcCh-hce
Confidence 9998 7777653221110000 0 12234554 3455554 356999999999975 678
Q ss_pred EEE-EcCCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccCCCCCeeEEEEeCC
Q 018318 184 LII-CGGSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRGPRAGMIFYRKG 259 (358)
Q Consensus 184 ~v~-~~~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~gG~i~~~~~ 259 (358)
+++ ++.++ ++...|+++|+++||+||+++++|++|+..+ ..... ++|++++|+||+|.||++|+++.+++
T Consensus 151 ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~~ 224 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKKK 224 (363)
T ss_pred EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcHH
Confidence 665 44433 3457899999999999999999999986321 01112 68999999999999999999887653
Q ss_pred CCCCCCCCCCCccccHHHHhhhhcCCCCcC--CCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Ccee
Q 018318 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQG--GPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSL 336 (358)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~ 336 (358)
+.+.+..... +... ......++++.+|+..+... ..+..++..++++++++.|.+. |+++
T Consensus 225 ---------------~i~~~~~~~~-~~~~~~~~~~~~~~gl~aAl~~~~~~-~~~~~~~~~~~~~~l~~~L~~i~g~~~ 287 (363)
T TIGR01437 225 ---------------YIEWVKLQSK-GIGRAMKVGKENILGLTAALEQYLST-GKESGAEMVAKLTPFIEALNTLKGVSA 287 (363)
T ss_pred ---------------HHHHHHhccC-CCcceeccCHHHHHHHHHHHHHHHcc-CcccHHHHHHHHHHHHHHHhcCCCeEE
Confidence 3333221111 1000 01113366777788776532 2344445556788899999987 8888
Q ss_pred ee
Q 018318 337 VT 338 (358)
Q Consensus 337 ~~ 338 (358)
..
T Consensus 288 ~~ 289 (363)
T TIGR01437 288 SI 289 (363)
T ss_pred EE
Confidence 74
No 59
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.89 E-value=2.8e-21 Score=185.44 Aligned_cols=287 Identities=14% Similarity=0.081 Sum_probs=177.1
Q ss_pred ceeEe-ccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHH
Q 018318 33 GIELI-ASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN 110 (358)
Q Consensus 33 ~~~l~-a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~ 110 (358)
.+-|. ++.+++|+.|.+++..++.. ++.+....+ +.+. .+. .+++.. +.+ +++|+++++ .+++.++|+++
T Consensus 28 ~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~-~~~~~~~~-~~~~~~-~~~-~l~g~~~~~---v~~~~~~t~~l 99 (406)
T TIGR01814 28 VIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGH-NTGKAPWF-TLDESL-LKL-RLVGAKEDE---VVVMNTLTINL 99 (406)
T ss_pred cEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccC-ccCCCChh-hhhhhh-ccc-cccCCCCCc---EEEeCCchHHH
Confidence 45555 55667799999998876643 321111111 1111 222 222222 335 899998753 24455667788
Q ss_pred HHHHHhhcCCCC---eEEEecCCCCccccccccccCCcccccccceeE--EeecccCCCCCCCCHHHHHHHHhh--cCCc
Q 018318 111 FAAYTAVLEPHD---RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFE--SLPYKVNSSTGYIDYDKLEEKALD--FRPK 183 (358)
Q Consensus 111 ~~~l~a~~~~gd---~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~id~~~l~~~l~~--~~~~ 183 (358)
..++.+++++|+ .|++...+|++...... ..++..|..+. .+.++.+ .++.+|++++++.+++ .+++
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~-----~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~ 173 (406)
T TIGR01814 100 HLLLASFYKPTPKRYKILLEAKAFPSDHYAIE-----SQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIA 173 (406)
T ss_pred HHHHHHhcCCcCCccEEEecCCCCChHHHHHH-----HHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeE
Confidence 988888776653 57776777775431110 01123354431 1233332 2567899999998853 3678
Q ss_pred EEEEcCCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCCCCeeEEEEeCC
Q 018318 184 LIICGGSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRAGMIFYRKG 259 (358)
Q Consensus 184 ~v~~~~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g~~gG~i~~~~~ 259 (358)
+|++++.+ +|...|+++|+++||++|+++++|++|+.|... .++. ++|++++|+||||.||+||+++..++
T Consensus 174 lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~-----id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~ 248 (406)
T TIGR01814 174 VILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP-----LDLHDWGVDFACWCTYKYLNAGPGAGAFVHEK 248 (406)
T ss_pred EEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcc-----cccccCCCCEEEEcCccccCCCCCeEEEEehh
Confidence 88776544 467889999999999999999999999998652 3343 89999999999997666766555443
Q ss_pred -CCCCCCC--CC-CCc-cccHH--HHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 260 -PKPPKKG--QP-EGA-VYDFE--DKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 260 -~~~~~~~--~~-~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
...+.+. +- ... .+.+. ............|+++...++++.+|++.+...+++...++..++++++++.|.+.
T Consensus 249 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 328 (406)
T TIGR01814 249 HAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKAR 328 (406)
T ss_pred hhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 2111110 10 000 00000 00000000112367888889999999998766567888899999999999999874
Q ss_pred -----Cceeee
Q 018318 333 -----GYSLVT 338 (358)
Q Consensus 333 -----G~~~~~ 338 (358)
|++++.
T Consensus 329 ~~~~~~~~i~~ 339 (406)
T TIGR01814 329 CGGPPVLTIIT 339 (406)
T ss_pred cCCCCceEEeC
Confidence 488775
No 60
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.88 E-value=4.3e-21 Score=180.33 Aligned_cols=256 Identities=20% Similarity=0.194 Sum_probs=171.5
Q ss_pred ccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHH
Q 018318 38 ASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (358)
Q Consensus 38 a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~ 112 (358)
.++.++ +|+|++++.+.+.+ ++.++.+.++..| .+....+ ++.+++++|++. .+++++|++++..
T Consensus 7 ~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l----~~~la~~~~~~~-----~iv~~sg~~a~~~ 76 (349)
T cd06454 7 CSNDYLGLANHPEVIEAAKEALDK-YGVGAGGSRLISGTSDLHEEL----EEELAEFHGKEA-----ALVFSSGYAANDG 76 (349)
T ss_pred ccCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCeecCCchHHHHH----HHHHHHHhCCCC-----EEEeccHHHHHHH
Confidence 455554 69999999998863 4332222222222 3334444 488999999864 3667889999998
Q ss_pred HHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh----cCCcEEEEc
Q 018318 113 AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD----FRPKLIICG 188 (358)
Q Consensus 113 ~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~----~~~~~v~~~ 188 (358)
++.++++|||+|++..+.|.+... .+...|.. +++++ .+|++.+++++++ .++++|+++
T Consensus 77 ~~~~~~~~gd~Vl~~~~~~~~~~~---------~~~~~g~~--~~~~~------~~~~~~le~~i~~~~~~~~~~~v~~~ 139 (349)
T cd06454 77 VLSTLAGKGDLIISDSLNHASIID---------GIRLSGAK--KRIFK------HNDMEDLEKLLREARRPYGKKLIVTE 139 (349)
T ss_pred HHHHhcCCCCEEEEehhhhHHHHH---------HHHHcCCc--eEEec------CCCHHHHHHHHHHhhccCCCeEEEEe
Confidence 888889999999999887765331 12334543 33332 3688899998875 346777776
Q ss_pred CCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhcccc---CCCC--CcccEEEecCCccCCCCCeeEEEEeCCCC
Q 018318 189 GSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA---ANPF--EYCHIVTTTTHKSLRGPRAGMIFYRKGPK 261 (358)
Q Consensus 189 ~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~---~~~~--~~~d~~~~s~~K~l~g~~gG~i~~~~~~~ 261 (358)
+++ +|...|+++|.++|+++|+++|+|++|+.|....... .... .+.|++++|+||+++ ++||+++.++
T Consensus 140 ~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~i~~~~--- 215 (349)
T cd06454 140 GVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVGGYIAGSK--- 215 (349)
T ss_pred ccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccCCEEECCH---
Confidence 654 3567899999999999999999999998765432100 0111 278999999999875 4778888766
Q ss_pred CCCCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 262 PPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
++.+.+.....+.. .++.+...++++.++++.... ....+++..++++++.+.|.+.|+++..
T Consensus 216 ------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 279 (349)
T cd06454 216 ------------ELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGG 279 (349)
T ss_pred ------------HHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 34444433222221 223444555566667766532 4566788899999999999998988765
No 61
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.88 E-value=5.2e-22 Score=171.95 Aligned_cols=267 Identities=21% Similarity=0.245 Sum_probs=194.5
Q ss_pred ceeEeccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCCchhH-HHHHHHHHHHHHHhcCCCCCCCCccccccCCh
Q 018318 33 GIELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGNEFI-DEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (358)
Q Consensus 33 ~~~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~-~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt 107 (358)
.+..+.+++++ +|+|++|-.+.+. .|+.|..+.++..|.+.. ..|| .++|++++.++ .+...++.
T Consensus 68 ~ilnFcaNnYLGLsshPeii~a~~~ale-eyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypscf 137 (417)
T KOG1359|consen 68 KILNFCANNYLGLSSHPEIINAGQKALE-EYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSCF 137 (417)
T ss_pred ceeeecccccccccCChHHHHHHHHHHH-HhCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEecccc
Confidence 45666678887 7999999887774 677888888888887644 4666 78999999887 36688999
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh---cCCcE
Q 018318 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRPKL 184 (358)
Q Consensus 108 ~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~---~~~~~ 184 (358)
.||..++.+++.|.|.|+.....|.+++. + ++++. + .+++|.-+++..+.. .+-++
T Consensus 138 dANag~feail~pedAvfSDeLNhASIId-G--------irLck------r------y~h~dv~~l~~~l~~a~k~r~kl 196 (417)
T KOG1359|consen 138 DANAGAFEAILTPEDAVFSDELNHASIID-G--------IRLCK------R------YRHVDVFDLEHCLISACKMRLKL 196 (417)
T ss_pred ccchHHHHHhcChhhhhhccccccchhhh-h--------hHHHh------h------hccchhHHHHHHHHHhhhheEEE
Confidence 99999999999999999998887776541 1 11111 1 346777777765542 34566
Q ss_pred EEEcC--CCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhcccc-----CCCCCcccEEEecCCccCCCCCeeEEEEe
Q 018318 185 IICGG--SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA-----ANPFEYCHIVTTTTHKSLRGPRAGMIFYR 257 (358)
Q Consensus 185 v~~~~--~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-----~~~~~~~d~~~~s~~K~l~g~~gG~i~~~ 257 (358)
|+.+. +.-|...|+++|.+++++||+++++|+||+.|+.+...- .+....+|++..++.|+++|..|||..++
T Consensus 197 v~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp 276 (417)
T KOG1359|consen 197 VVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGP 276 (417)
T ss_pred EEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCC
Confidence 66542 344567799999999999999999999999987764211 11123789999999999999999999999
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCcee
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGAL-AVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~ 336 (358)
++ +...++....|++.++..++.+.++ +.++..+.. -...+.+...+.++|++.....||++
T Consensus 277 ~~---------------li~llrqr~RpylFSnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~aGftI 339 (417)
T KOG1359|consen 277 KP---------------LISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAAGFTI 339 (417)
T ss_pred hh---------------HHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 94 5666666666777666666555444 344544432 24667788999999999999999998
Q ss_pred eeCCCcceEEEEE
Q 018318 337 VTGGTENHLVLWD 349 (358)
Q Consensus 337 ~~~~~~~~~~~v~ 349 (358)
.. .+.+++.|-
T Consensus 340 sg--~~hPI~pv~ 350 (417)
T KOG1359|consen 340 SG--ASHPICPVM 350 (417)
T ss_pred cC--CCCCcccee
Confidence 64 334555543
No 62
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.88 E-value=3.7e-21 Score=183.33 Aligned_cols=268 Identities=17% Similarity=0.154 Sum_probs=184.2
Q ss_pred cceeEeccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+..+++++|+ +|+++++..+.+ .+|+.|..+++...|. ....+|| +.+++++|.+. .+.++||
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~-----all~sSG 171 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLE----SSLADLKKKED-----CLVCPTG 171 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHH----HHHHHHHCCCc-----EEEECCh
Confidence 356778899997 799999988877 4688888888877776 4555687 78999999887 4779999
Q ss_pred hHHHHHHHHhhc--------------CCCCeEEEecCCCCccccccccccCCcccccccc--eeEEeecccCCCCCCCCH
Q 018318 107 SPANFAAYTAVL--------------EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI--YFESLPYKVNSSTGYIDY 170 (358)
Q Consensus 107 t~a~~~~l~a~~--------------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~id~ 170 (358)
+.||..++.++. .++|.|++....|.+... + +++... +...+.++ +.|+
T Consensus 172 y~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d-G--------~~ls~~~~~a~~~~f~------HND~ 236 (476)
T PLN02955 172 FAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID-G--------VRLAERQGNVEVFVYR------HCDM 236 (476)
T ss_pred HHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH-H--------HHhccccCCceEEEeC------CCCH
Confidence 999999998872 456778888877766542 1 222210 12344443 6899
Q ss_pred HHHHHHHhhcC--CcEEEEcC--CCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhcccc--CC--CC-CcccEEEec
Q 018318 171 DKLEEKALDFR--PKLIICGG--SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA--AN--PF-EYCHIVTTT 241 (358)
Q Consensus 171 ~~l~~~l~~~~--~~~v~~~~--~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~--~~-~~~d~~~~s 241 (358)
++|++++++.+ .++|+++. ++.|...|+++|.++|++||+++++|++|+.|..+.... .. .+ ...|++++|
T Consensus 237 ~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~T 316 (476)
T PLN02955 237 YHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGT 316 (476)
T ss_pred HHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEe
Confidence 99999997543 34555542 344567799999999999999999999999887654111 11 11 267899999
Q ss_pred CCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChh-HHHHHHHHHHHhccHHHHHHHHHHHH
Q 018318 242 THKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNH-QIGALAVALKQASTPAFKAYAKQVKA 320 (358)
Q Consensus 242 ~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~al~~al~~~~~~~~~~~~~~~~~ 320 (358)
++|+| |..||++++++ ++.+.+.....++..+++.++ ..++..++++.+... ...++++++
T Consensus 317 LsKA~-G~~GGfi~gs~---------------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~ 378 (476)
T PLN02955 317 LSKAA-GCHGGFIACSK---------------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWE 378 (476)
T ss_pred Cccch-hccCceeecHH---------------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHH
Confidence 99997 57899999987 355555543334444444433 344445566655332 356788999
Q ss_pred HHHHHHHHHhhCCceeeeCCCcceEEEEEc
Q 018318 321 NAVALGNYLTGKGYSLVTGGTENHLVLWDL 350 (358)
Q Consensus 321 ~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~ 350 (358)
|.++|++. .|+.+ .++++.|-+
T Consensus 379 n~~~fr~~---~G~~~-----~sPI~pI~i 400 (476)
T PLN02955 379 RVKEFKAL---SGVDI-----SSPIISLVV 400 (476)
T ss_pred HHHHHHHh---cCCCC-----CCCEEEEEe
Confidence 99999884 36543 255655554
No 63
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.88 E-value=5.1e-21 Score=182.65 Aligned_cols=243 Identities=19% Similarity=0.249 Sum_probs=166.1
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.....+|| +.+++++|.+. .+.+++|+.|++.++.++++|||.| ++.+.+..+. ..+...
T Consensus 51 ~~~g~~~Le----eaia~~~g~~~-----vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~---------~~i~~~ 111 (431)
T cd00617 51 GSKSFYDLE----DAVQDLFGFKH-----IIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTR---------GHIEAN 111 (431)
T ss_pred CCCCHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchH---------HHHHhC
Confidence 334456777 67888999876 3778899999999999999999987 3443322211 123445
Q ss_pred cceeEEeecccCCC---------CCCCCHHHHHHHHhhc---CCcEEEEcCCCCC---Ccc---chHHHHHHHHHhCCEE
Q 018318 151 SIYFESLPYKVNSS---------TGYIDYDKLEEKALDF---RPKLIICGGSAYP---RDW---DYARFRAVADKCGALL 212 (358)
Q Consensus 151 g~~~~~~~~~~~~~---------~~~id~~~l~~~l~~~---~~~~v~~~~~~~~---~~~---~l~~i~~la~~~g~~l 212 (358)
|.. ++.+++++. .+.+|+++|++++.+. ++++|+++.|+|+ .+. ++++|.++|++||++|
T Consensus 112 Ga~--pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~l 189 (431)
T cd00617 112 GAV--PVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPV 189 (431)
T ss_pred CCE--eEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 654 444444321 3569999999999753 3677877766653 444 4678899999999999
Q ss_pred EEechhhhhhhh------ccccCCCC--------CcccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHH
Q 018318 213 LCDMAHISGLVA------AQEAANPF--------EYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDK 278 (358)
Q Consensus 213 vvD~a~~~g~~~------~~~~~~~~--------~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~ 278 (358)
|.|+||+.+... .+....++ +.+|.+++|++|.+.++.||+++++++ ++.++
T Consensus 190 i~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~--------------~l~~~ 255 (431)
T cd00617 190 VLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD--------------ELYEE 255 (431)
T ss_pred EEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH--------------HHHHH
Confidence 999998865221 11111221 268999999999887888999999885 45555
Q ss_pred hhhhc--CCC--CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 279 INFAV--FPS--LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 279 ~~~~~--~~~--~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
++... ..+ ..++.+...+++++.+|+...+ .++.++..+.+++|.+.|.+.|+++.. +..+|.+|+|+..
T Consensus 256 ~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~G~~v~~-P~Ggh~v~~d~~~ 329 (431)
T cd00617 256 ARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEAGVPIVE-PAGGHAVFIDARE 329 (431)
T ss_pred HHHhccccCCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHCCCCccC-CCcceEEEEEhHH
Confidence 55321 111 1244455556666667765322 244555566779999999999999876 6789999999985
No 64
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=8.2e-21 Score=177.73 Aligned_cols=266 Identities=19% Similarity=0.169 Sum_probs=166.7
Q ss_pred cCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHh
Q 018318 39 SENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (358)
Q Consensus 39 ~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a 116 (358)
++++ ++|.+++++.+..... . . +...+...+++ +++++++| +.. .+++++|++|+..++.+
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~~-~------~-~~~~~~~~~l~----~~~a~~~g-~~~----~~~~~~gt~a~~~~~~~ 66 (338)
T cd06502 4 SDTVTGPTPEMLEAMAAANVGD-D------V-YGEDPTTAKLE----ARAAELFG-KEA----ALFVPSGTAANQLALAA 66 (338)
T ss_pred cccCCCCCHHHHHHHHhcccCC-c------c-cCCCHHHHHHH----HHHHHHhC-CCe----EEEecCchHHHHHHHHH
Confidence 4444 5899999997654221 1 1 11223444554 78999999 432 46778899999999999
Q ss_pred hcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc------CCcEEEEcCC
Q 018318 117 VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF------RPKLIICGGS 190 (358)
Q Consensus 117 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~------~~~~v~~~~~ 190 (358)
++++||+|++.++.|.+..... ......|+. ++.++.+ ++.+|++++++++.+. ++++|+++++
T Consensus 67 l~~~gd~v~~~~~~~~~~~~~~------~~~~~~g~~--~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 67 HTQPGGSVICHETAHIYTDEAG------APEFLSGVK--LLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred hcCCCCeEEEecCcceeeecCC------cHHHHcCce--EEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 9999999999988776533110 011234544 4444443 4679999999999642 5788888877
Q ss_pred CCC-C---ccchHHHHHHHHHhCCEEEEechhhhhhhhc-cccCCCC-CcccEEEecCCccCCCCCeeEEEEeCCCCCCC
Q 018318 191 AYP-R---DWDYARFRAVADKCGALLLCDMAHISGLVAA-QEAANPF-EYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPK 264 (358)
Q Consensus 191 ~~~-~---~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~-~~~~~~~-~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~ 264 (358)
+++ . ..++++|.++|++||+++++|++|..+.... +...... .++|+++.|+||+++.|.|++++.++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~------ 210 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR------ 210 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH------
Confidence 654 2 3467889999999999999999986543221 1100111 26899999999998766555555555
Q ss_pred CCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcce
Q 018318 265 KGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENH 344 (358)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~ 344 (358)
++.+.+.....+. .++.....+.+ .+++..+...++..+.++..++++++.+.|++.|+.+.. ..++
T Consensus 211 ---------~~~~~~~~~~~~~-~~~~~~~~~~~-~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~ 277 (338)
T cd06502 211 ---------DFIARARRRRKQA-GGGMRQSGFLA-AAGLAALENDLWLRRLRHDHEMARRLAEALEELGGLESE--VQTN 277 (338)
T ss_pred ---------HHHHHHHHHHHHh-CCChhhHHHHH-HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccCC
Confidence 3444444321111 11111222221 223333332345566788899999999999999886543 3455
Q ss_pred EEEEEc
Q 018318 345 LVLWDL 350 (358)
Q Consensus 345 ~~~v~~ 350 (358)
.+.+..
T Consensus 278 ~~~v~~ 283 (338)
T cd06502 278 IVLLDP 283 (338)
T ss_pred eEEEec
Confidence 555554
No 65
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.88 E-value=4.1e-21 Score=180.74 Aligned_cols=240 Identities=17% Similarity=0.147 Sum_probs=158.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCCCCeEEEecCCCCccccccccccCCccccccc
Q 018318 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g 151 (358)
+...++| +.+++++|.+. .+++++|+.|+..++.++ +++||+|+++.++|.+... .+...|
T Consensus 18 ~~~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~---------~~~~~g 79 (352)
T cd00616 18 PKVREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN---------AILLLG 79 (352)
T ss_pred HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH---------HHHHcC
Confidence 3455666 78999999754 366788999999999988 6899999999987765431 233455
Q ss_pred ceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCC
Q 018318 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANP 231 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~ 231 (358)
. +++.++++..++.+|++++++++++ ++++|++.+ .+|...|+++|.++|+++|+++++|++|+.|....+. .
T Consensus 80 ~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~ 152 (352)
T cd00616 80 A--TPVFVDIDPDTYNIDPELIEAAITP-RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---K 152 (352)
T ss_pred C--eEEEEecCCCcCCcCHHHHHHhcCc-CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---E
Confidence 4 4455555533678999999999864 788887764 4677789999999999999999999999988654321 1
Q ss_pred CC-cccEEEecCC--ccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcC--------CC-ChhHHHHH
Q 018318 232 FE-YCHIVTTTTH--KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQG--------GP-HNHQIGAL 299 (358)
Q Consensus 232 ~~-~~d~~~~s~~--K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~al 299 (358)
+. ..|+.++|+| |+++++.||+++++++ ++.+.+......+... .. ....+..+
T Consensus 153 ~~~~~d~~~~S~~~~K~~~~~~gg~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (352)
T cd00616 153 VGTFGDAGAFSFHPTKNLTTGEGGAVVTNDE--------------ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEI 218 (352)
T ss_pred cccCcceeEEcCCCCCCCcccCceEEEECCH--------------HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHH
Confidence 22 3577777755 9997778898888763 3333322211100000 00 00011111
Q ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCC----cceEEEEEcC
Q 018318 300 AVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGT----ENHLVLWDLR 351 (358)
Q Consensus 300 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~----~~~~~~v~~~ 351 (358)
.+++.....+.++++.++.+++++++++.|.+. |+++..+.. ..+.+.+.+.
T Consensus 219 ~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~ 275 (352)
T cd00616 219 QAAIGLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLD 275 (352)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEEC
Confidence 122222122346777888999999999999985 888765322 2345555543
No 66
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=3.2e-20 Score=176.12 Aligned_cols=268 Identities=17% Similarity=0.166 Sum_probs=171.1
Q ss_pred CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc---
Q 018318 42 FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--- 118 (358)
Q Consensus 42 ~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--- 118 (358)
.+.+.+.+++...+.... +.++ .+.+ ...+++.+++++++++|+++.+ .+++++|++++..++.++.
T Consensus 31 ~~~~~~~~a~~~~~~~~~--~~~~--~~~~---~~~~~~~~~~~la~~~g~~~~~---~~~~~g~~~~~~~~~~~~~~~~ 100 (373)
T TIGR03812 31 NPHPIAVKAYDMFIETNL--GDPG--LFPG---TKKIEEEVVGSLGNLLHLPDAY---GYIVSGGTEANIQAVRAAKNLA 100 (373)
T ss_pred CchHHHHHHHHHHhhcCC--CCcc--cCcc---HHHHHHHHHHHHHHHhCCCCCC---eEEeccHHHHHHHHHHHHHHHH
Confidence 355666777766554322 2322 1222 2345567789999999997642 2456667788877766553
Q ss_pred ---CCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCC-cEEEEcC-CCCC
Q 018318 119 ---EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRP-KLIICGG-SAYP 193 (358)
Q Consensus 119 ---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~-~~v~~~~-~~~~ 193 (358)
++||+|+++.++|.++. ..++..|..+..+ +++ .++.+|++++++++++ ++ .+++++. +.+|
T Consensus 101 ~~~~~g~~vl~~~~~h~~~~---------~~~~~~G~~~~~v--~~~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~tG 167 (373)
T TIGR03812 101 REEKRTPNIIVPESAHFSFE---------KAAEMLGLELRYA--PLD-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTELG 167 (373)
T ss_pred hccCCCcEEEECCcchHHHH---------HHHHHcCCeEEEE--eeC-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCCC
Confidence 47799999887665432 1234556554444 444 3678999999999975 44 4444442 2355
Q ss_pred CccchHHHHHHHHHhCCEEEEechhhhhhhhcc----cc-CCCCC--cccEEEecCCccCCCC-CeeEEE-EeCCCCCCC
Q 018318 194 RDWDYARFRAVADKCGALLLCDMAHISGLVAAQ----EA-ANPFE--YCHIVTTTTHKSLRGP-RAGMIF-YRKGPKPPK 264 (358)
Q Consensus 194 ~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~----~~-~~~~~--~~d~~~~s~~K~l~g~-~gG~i~-~~~~~~~~~ 264 (358)
...|+++|.++||++|+++++|++|+.+..... .. ..++. ++|++++|+|||+.+| ++|+++ .+++
T Consensus 168 ~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~----- 242 (373)
T TIGR03812 168 QIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKS----- 242 (373)
T ss_pred ccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHH-----
Confidence 778999999999999999999999975543211 00 11222 7899999999985444 345444 4443
Q ss_pred CCCCCCccccHHHHhhhhcCCC--------CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCcee
Q 018318 265 KGQPEGAVYDFEDKINFAVFPS--------LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (358)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~ 336 (358)
+.+.+... .++ ..++++...++++.++++.+..++++.+.++..+++++|++.|++.|++.
T Consensus 243 ----------~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~ 311 (373)
T TIGR03812 243 ----------YLKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEP 311 (373)
T ss_pred ----------HHhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 22222211 111 11344555677777888876656678889999999999999999998865
Q ss_pred eeCCCcceEEEEE
Q 018318 337 VTGGTENHLVLWD 349 (358)
Q Consensus 337 ~~~~~~~~~~~v~ 349 (358)
..+ ..++.+.+.
T Consensus 312 ~~~-~~~~~v~~~ 323 (373)
T TIGR03812 312 VIE-PVLNIVAFE 323 (373)
T ss_pred EcC-CCceEEEEE
Confidence 432 345555554
No 67
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.87 E-value=1.2e-20 Score=180.91 Aligned_cols=271 Identities=20% Similarity=0.220 Sum_probs=177.6
Q ss_pred ceeEeccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh
Q 018318 33 GIELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (358)
Q Consensus 33 ~~~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt 107 (358)
.+..+.+++++ +|+|++|+.+.+. .++.+..+++...| .+...+|| +.+++++|.+. .++++||+
T Consensus 46 ~~~~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG~ 115 (402)
T TIGR01821 46 DVTVWCSNDYLGMGQHPEVLQAMHETLD-KYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSGY 115 (402)
T ss_pred eEEEeEccCcCCCCCCHHHHHHHHHHHH-HcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECchH
Confidence 34566788887 7999999988875 45445444443333 34455666 78999999654 47789999
Q ss_pred HHHHHHHHhhcC--CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc---CC
Q 018318 108 PANFAAYTAVLE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---RP 182 (358)
Q Consensus 108 ~a~~~~l~a~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~---~~ 182 (358)
+|+..++..+.+ +|+.|+.....|++... .+...|.. ...++ ..|+++++++++.. ++
T Consensus 116 ~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~---------~~~~~g~~--~~~~~------~~d~~~l~~~l~~~~~~~~ 178 (402)
T TIGR01821 116 VANDATLATLAKIIPGCVIFSDELNHASMIE---------GIRHSGAE--KFIFR------HNDVAHLEKLLQSVDPNRP 178 (402)
T ss_pred HHHHHHHHHhhCCCCCCEEEEcchHhHHHHH---------HHHHcCCe--EEEEC------CCCHHHHHHHHHhccCCCC
Confidence 999999988754 77777776656654321 12234432 22232 35788888888632 46
Q ss_pred cEEEEcCCCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhcccc--CC--CC-CcccEEEecCCccCCCCCeeEEE
Q 018318 183 KLIICGGSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA--AN--PF-EYCHIVTTTTHKSLRGPRAGMIF 255 (358)
Q Consensus 183 ~~v~~~~~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~--~~-~~~d~~~~s~~K~l~g~~gG~i~ 255 (358)
++|+++++.+ |...|+++|.++|++||+++++|++|+.|+.+.... .. .+ ...|+++.|++|+++ ..||+++
T Consensus 179 ~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~GG~i~ 257 (402)
T TIGR01821 179 KIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFG-VVGGYIA 257 (402)
T ss_pred eEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhc-cCCceee
Confidence 7888877654 467899999999999999999999999775432110 11 11 246899999999985 5678888
Q ss_pred EeCCCCCCCCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCc
Q 018318 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (358)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~ 334 (358)
+++ ++.+.+.....+.. .++.+...+++..++++.+... ....++..++++++++.|++.|+
T Consensus 258 ~~~---------------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~ 320 (402)
T TIGR01821 258 ASR---------------KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGI 320 (402)
T ss_pred cCH---------------HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCC
Confidence 776 34444433221211 2223334455555666655422 44556677899999999999998
Q ss_pred eeeeCCCcceEEEEEc
Q 018318 335 SLVTGGTENHLVLWDL 350 (358)
Q Consensus 335 ~~~~~~~~~~~~~v~~ 350 (358)
++.. ..++++++.+
T Consensus 321 ~~~~--~~~~i~~i~~ 334 (402)
T TIGR01821 321 PVIP--NPSHIVPVII 334 (402)
T ss_pred CcCC--CCCCEEEEEe
Confidence 8764 3455666654
No 68
>PLN02483 serine palmitoyltransferase
Probab=99.87 E-value=1.3e-20 Score=183.83 Aligned_cols=258 Identities=19% Similarity=0.159 Sum_probs=166.6
Q ss_pred HHHHHHHhcccccCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCe
Q 018318 45 FAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDR 123 (358)
Q Consensus 45 ~~V~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~ 123 (358)
+.|.+++. +++.+..+++...| .+...++| +.+|+++|.+. .+++++|+.++..++.++++|||.
T Consensus 122 ~~~~~ai~-----~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~G~~an~~~i~al~~~Gd~ 187 (489)
T PLN02483 122 PRVIESLK-----KYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGMGYATNSTIIPALIGKGGL 187 (489)
T ss_pred HHHHHHHH-----HhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCCCCCE
Confidence 45555543 34444445554333 45556666 78999999765 377789998888889999999999
Q ss_pred EEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc------CC-----cEEEE-cC--
Q 018318 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF------RP-----KLIIC-GG-- 189 (358)
Q Consensus 124 Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~------~~-----~~v~~-~~-- 189 (358)
|++..+.|.+... .++..|+. ++.++. .|++++++++++. ++ +++++ +.
T Consensus 188 Vi~d~~~h~s~~~---------~~~~~Ga~--v~~~~~------~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~ 250 (489)
T PLN02483 188 IISDSLNHNSIVN---------GARGSGAT--IRVFQH------NTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIY 250 (489)
T ss_pred EEEcchhhHHHHH---------HHHHcCCe--EEEEeC------CCHHHHHHHHHhhhhccccccccCCceEEEEECCCC
Confidence 9999998877542 23456654 344432 3567777666421 11 44444 32
Q ss_pred CCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccc---cC-CCC--CcccEEEecCCccCCCCCeeEEEEeCCCCCC
Q 018318 190 SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQE---AA-NPF--EYCHIVTTTTHKSLRGPRAGMIFYRKGPKPP 263 (358)
Q Consensus 190 ~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~---~~-~~~--~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~ 263 (358)
+..|...++++|.++|++||+++++|++|+.|..+... .. ..+ .++|++++|++|+| |+.||++++++
T Consensus 251 s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~-g~~GG~i~~~~----- 324 (489)
T PLN02483 251 SMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF-GSCGGYIAGSK----- 324 (489)
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc-ccCceEEEcCH-----
Confidence 23456679999999999999999999999876543210 00 112 26799999999998 46789998877
Q ss_pred CCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 264 KKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTP----AFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
++.+.+........ .++..+...++..++++.+..+ ...+.+++++++++++++.|+++|+++..
T Consensus 325 ----------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~ 394 (489)
T PLN02483 325 ----------ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLG 394 (489)
T ss_pred ----------HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 45555554322111 1223334444445566654311 12456788999999999999999998764
Q ss_pred CCCcceEEEEEc
Q 018318 339 GGTENHLVLWDL 350 (358)
Q Consensus 339 ~~~~~~~~~v~~ 350 (358)
...++.+|+-+
T Consensus 395 -~~~sp~~~l~l 405 (489)
T PLN02483 395 -DNDSPVMPIML 405 (489)
T ss_pred -CCCCCEEEEEE
Confidence 33455666543
No 69
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.87 E-value=4.9e-20 Score=175.44 Aligned_cols=299 Identities=14% Similarity=0.087 Sum_probs=183.7
Q ss_pred ccchHHHHHHHHHHHHhhcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC
Q 018318 14 TVDPEIHDLIEKEKRRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH 91 (358)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g 91 (358)
++....+..+..........+.|..++.. +++.+.+++.+.+.... ..|+.. .....+.+.+.+++++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~------~G~~~lr~~la~~~~~~~~ 79 (382)
T PRK06108 7 ALPESGIREVANAGRGREGVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTHN------LGIPELREALARYVSRLHG 79 (382)
T ss_pred hCCchHHHHHHHHHhccCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC------CCCHHHHHHHHHHHHHHhC
Confidence 33344444333332222355778876543 47889999877654321 123221 2233555556677888778
Q ss_pred --CCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCC
Q 018318 92 --LDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYID 169 (358)
Q Consensus 92 --~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id 169 (358)
+++++ .++++++++|+..++.++++|||+|++..|+|..+.. .++..|..+..++++.+..++.+|
T Consensus 80 ~~~~~~~---i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~---------~~~~~g~~~~~v~~~~~~~~~~~d 147 (382)
T PRK06108 80 VATPPER---IAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVA---------APKILGARVVCVPLDFGGGGWTLD 147 (382)
T ss_pred CCcCcce---EEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHH---------HHHHCCCEEEEeeCCCCCCCccCC
Confidence 55432 2444455679999999999999999999998765431 234456554444443212245699
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhc-c-ccCC--CC-C--cccE
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAA-Q-EAAN--PF-E--YCHI 237 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~-~-~~~~--~~-~--~~d~ 237 (358)
++++++.+.+ ++++|++++++||+ . .++++|.++|+++|+++|+|+++. ++.+. + ..+. .+ + ...+
T Consensus 148 ~~~l~~~~~~-~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i 225 (382)
T PRK06108 148 LDRLLAAITP-RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYE-RLYYAPGGRAPSFLDIAEPDDRII 225 (382)
T ss_pred HHHHHHhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhh-hhccCCCCCCCCHhhcCCCcCCEE
Confidence 9999998864 68888888787763 2 357899999999999999999965 33332 1 1111 11 1 2347
Q ss_pred EEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHH
Q 018318 238 VTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (358)
Q Consensus 238 ~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~ 315 (358)
++.|++|.+ +|.+.|+++++++ +.+.+..... ....+++.....+...++... ...+++.+
T Consensus 226 ~~~S~SK~~g~~G~RiG~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~ 288 (382)
T PRK06108 226 FVNSFSKNWAMTGWRLGWLVAPPA---------------LGQVLEKLIE-YNTSCVAQFVQRAAVAALDEG-EDFVAELV 288 (382)
T ss_pred EEeechhhccCcccceeeeeCCHH---------------HHHHHHHHHH-hcccCCChHHHHHHHHHHhCC-hHHHHHHH
Confidence 899999976 4667799999763 4444433211 111112222222223333321 12346777
Q ss_pred HHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 316 KQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 316 ~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
+++.++++++.+.|++. |+++.. +..+..+|+++.
T Consensus 289 ~~~~~~~~~l~~~L~~~~~~~~~~-p~~g~~~~~~l~ 324 (382)
T PRK06108 289 ARLRRSRDHLVDALRALPGVEVAK-PDGAMYAFFRIP 324 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCcccC-CCeeEEEEEeCC
Confidence 88888999999999887 888765 456777888875
No 70
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.87 E-value=9.3e-21 Score=195.11 Aligned_cols=290 Identities=16% Similarity=0.066 Sum_probs=181.9
Q ss_pred ceeEeccCCCCCHHH-HHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCcccccc-CChHHH
Q 018318 33 GIELIASENFTSFAV-IEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPY-SGSPAN 110 (358)
Q Consensus 33 ~~~l~a~~~~~~~~V-~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~-sGt~a~ 110 (358)
.+.-+++.+++++.+ .+++..++...+ +++.+.+..+....+.+| ++|+.+++++|+++++. .|+++ ++|+|+
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s~~~~~~~e-~aR~~ia~~lga~~~~~--~VvFtsnaT~al 110 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVY--GNPHSQSDSSMRSSDTIE-SARQQVLEYFNAPPSDY--ACVFTSGATAAL 110 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchhhhHHHHHH-HHHHHHHHHhCCCccce--EEEEeCChHHHH
Confidence 344446677766644 444444433322 344443444444555665 78999999999976431 24455 557799
Q ss_pred HHHHHhh-cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccC-----CCCCCCCH--HHHHHHHh----
Q 018318 111 FAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN-----SSTGYIDY--DKLEEKAL---- 178 (358)
Q Consensus 111 ~~~l~a~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~id~--~~l~~~l~---- 178 (358)
..+..++ +++||+|++...+|++..... ..++..|+.+..++++.+ .+.+.+++ +++++.++
T Consensus 111 nlva~~l~~~~gd~Iv~t~~eH~svl~~~------~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 111 KLVGETFPWSSESHFCYTLENHNSVLGIR------EYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred HHHHHHCCCCCCCeEEEeeccccchHHHH------HHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 9888887 889999999888887755211 111234554444443211 01334444 66776542
Q ss_pred -----hcCCcEEEEcCC--CCCCccchHHHHHHHHHh--------CCEEEEechhhhhhhhccccCCCCC--cccEEEec
Q 018318 179 -----DFRPKLIICGGS--AYPRDWDYARFRAVADKC--------GALLLCDMAHISGLVAAQEAANPFE--YCHIVTTT 241 (358)
Q Consensus 179 -----~~~~~~v~~~~~--~~~~~~~l~~i~~la~~~--------g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s 241 (358)
..++++|++.+. .+|.+.|++.|..+++.. ++++++|++|+.|.. +.++. ++|++++|
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~-----piDv~~~~~Dfl~~S 259 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTS-----PPDLSRYPADFVVVS 259 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCC-----CCChhhcCCCEEEEe
Confidence 124578877543 367889999876555532 368999999998864 24444 89999999
Q ss_pred CCccCCCCCe-eEEEEeCCCCC-CC---CCCCCCc-cc---cHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHH
Q 018318 242 THKSLRGPRA-GMIFYRKGPKP-PK---KGQPEGA-VY---DFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (358)
Q Consensus 242 ~~K~l~g~~g-G~i~~~~~~~~-~~---~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~ 312 (358)
+|||++||.| |+++.+++... +. .++..+. .. .+.............|+++...++++.+|++.+...+++
T Consensus 260 ~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~ 339 (805)
T PLN02724 260 FYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTIS 339 (805)
T ss_pred cceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChH
Confidence 9999888998 99999886432 22 1221110 00 000000000001124678888999999999987655678
Q ss_pred HHHHHHHHHHHHHHHHHhhC-------Cceeee
Q 018318 313 AYAKQVKANAVALGNYLTGK-------GYSLVT 338 (358)
Q Consensus 313 ~~~~~~~~~~~~l~~~L~~~-------G~~~~~ 338 (358)
.+.++..++++++.+.|+++ +++++.
T Consensus 340 ~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg 372 (805)
T PLN02724 340 AIAMHTWALTHYVANSLRNLKHGNGAPVCVLYG 372 (805)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC
Confidence 88899999999999999876 377775
No 71
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.87 E-value=2.3e-20 Score=177.85 Aligned_cols=270 Identities=14% Similarity=0.100 Sum_probs=175.6
Q ss_pred eccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHH
Q 018318 37 IASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (358)
Q Consensus 37 ~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~ 111 (358)
+++++++ +|++.+++.+.+. +|+.|+.+++.+.|+ ....+|| +++++++|.+. .+.+++|+.|+.
T Consensus 3 f~s~dyLgl~~~~~~~~~~~~a~~-~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~ 72 (392)
T PLN03227 3 FATHDFLSTSSSPTLRQTALESLS-HYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTS 72 (392)
T ss_pred CcCcCccCCCCCHHHHHHHHHHHH-HhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHH
Confidence 4577776 6899999888774 577777766544343 4556777 78999999875 377899999999
Q ss_pred HHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHH---HHhh---------
Q 018318 112 AAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEE---KALD--------- 179 (358)
Q Consensus 112 ~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~---~l~~--------- 179 (358)
.++.++++|||.|++....|++... .+.+.+. .+.+++. .|++++++ .+..
T Consensus 73 ~~i~~l~~~GD~Vl~~~~~h~s~~~---------~~~l~~~--~~~~~~~------~d~~~l~~~~~~i~~~~~a~~~~~ 135 (392)
T PLN03227 73 STVAAFAKRGDLLVVDRGVNEALLV---------GVSLSRA--NVRWFRH------NDMKDLRRVLEQVRAQDVALKRKP 135 (392)
T ss_pred HHHHHhCCCCCEEEEeccccHHHHH---------HHHHcCC--eEEEeCC------CCHHHHHHHHHHhhhhcccccccc
Confidence 9999999999999999988876532 1223332 3344432 24444444 3321
Q ss_pred -cCCcEEEEcCCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhc---cccC----CCCCcccEEEecCCccCCCC
Q 018318 180 -FRPKLIICGGSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAA---QEAA----NPFEYCHIVTTTTHKSLRGP 249 (358)
Q Consensus 180 -~~~~~v~~~~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~---~~~~----~~~~~~d~~~~s~~K~l~g~ 249 (358)
.++++|+++.+. .+...|+++|.++|++||+++++|++|+.|..+. +... .+..++|++++|++|.+ ||
T Consensus 136 ~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~ 214 (392)
T PLN03227 136 TDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GS 214 (392)
T ss_pred CCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hc
Confidence 146778877554 3467789999999999999999999998665432 1000 12237799999999985 68
Q ss_pred CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChh-HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 018318 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNH-QIGALAVALKQASTPAFKAYAKQVKANAVALGNY 328 (358)
Q Consensus 250 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (358)
.||+++++++ +.+.+.......+.++..++ ..++..++++.... .+...++++++.++|++.
T Consensus 215 ~gg~v~~~~~---------------~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~ 277 (392)
T PLN03227 215 VGGMTVGSEE---------------VVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYST 277 (392)
T ss_pred cCcEEecCHH---------------HHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 9999887763 44333322122222332222 23333345544322 246788899999999999
Q ss_pred HhhCCceeee---------CCCcceEEEEEcC
Q 018318 329 LTGKGYSLVT---------GGTENHLVLWDLR 351 (358)
Q Consensus 329 L~~~G~~~~~---------~~~~~~~~~v~~~ 351 (358)
|++.+++... ....++++.+.+.
T Consensus 278 L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~ 309 (392)
T PLN03227 278 LTNSSHPYALKLRNRLVITSDPISPIIYLRLS 309 (392)
T ss_pred HHhcCCccccccccccccCCCCCCCEEEEEeC
Confidence 9876543211 1134666767664
No 72
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.87 E-value=3.8e-20 Score=174.56 Aligned_cols=273 Identities=18% Similarity=0.156 Sum_probs=176.8
Q ss_pred cceeEeccCC---CCCHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh
Q 018318 32 RGIELIASEN---FTSFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (358)
Q Consensus 32 ~~~~l~a~~~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt 107 (358)
+.+.+..++. ..+|.|.+++.+.+. .++.++.+.+...|. +...++ ++.++++++.+. .+++++|+
T Consensus 17 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~~~~~-----~i~~~~G~ 86 (360)
T TIGR00858 17 RLLNFSSNDYLGLASHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEEL----EEELAEWKGTEA-----ALLFSSGY 86 (360)
T ss_pred eEEecccCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHHH----HHHHHHHhCCCC-----EEEECchH
Confidence 4566666632 235899999988774 343343332222232 333344 478888888654 36778888
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc---CCcE
Q 018318 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---RPKL 184 (358)
Q Consensus 108 ~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~---~~~~ 184 (358)
+++..++.++++|||+|++..+.|.+... .+...|..+ +.++ .+|+++++++++++ ++++
T Consensus 87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~~---------~~~~~g~~~--~~~~------~~d~~~l~~~~~~~~~~~~~~ 149 (360)
T TIGR00858 87 LANVGVISALVGKGDLILSDALNHASLID---------GCRLSGARV--RRYR------HNDVEHLERLLEKNRGERRKL 149 (360)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHH---------HHHhcCCce--EEec------CCCHHHHHHHHHHcccCCCeE
Confidence 88877788889999999999887765431 223445433 3332 36899999998753 3567
Q ss_pred EEEcCCCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhcccc---C-CCCC--cccEEEecCCccCCCCCeeEEEE
Q 018318 185 IICGGSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA---A-NPFE--YCHIVTTTTHKSLRGPRAGMIFY 256 (358)
Q Consensus 185 v~~~~~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~---~-~~~~--~~d~~~~s~~K~l~g~~gG~i~~ 256 (358)
|+++.+.+ |...|+++|.++|+++|+++|+|++|+.|....... . ..+. +.+++++|+||+|+ +.||+++.
T Consensus 150 v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~gG~~~~ 228 (360)
T TIGR00858 150 IVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SYGAYVAG 228 (360)
T ss_pred EEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-ccCcEEEc
Confidence 77665544 346799999999999999999999987664321100 0 1122 56899999999884 57788887
Q ss_pred eCCCCCCCCCCCCCccccHHHHhhhhcCCC-CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCce
Q 018318 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYS 335 (358)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~ 335 (358)
++ ++.+.+.....+. ..++.+...+++..++++... ..+...++..++++++.+.|++.|++
T Consensus 229 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~ 291 (360)
T TIGR00858 229 SQ---------------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEALGFT 291 (360)
T ss_pred CH---------------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 76 3444443222221 122233344455556665432 22456788999999999999998887
Q ss_pred eeeCCCcceEEEEEcC
Q 018318 336 LVTGGTENHLVLWDLR 351 (358)
Q Consensus 336 ~~~~~~~~~~~~v~~~ 351 (358)
+.. ..+..+|+.+.
T Consensus 292 ~~~--~~~~~~~~~~~ 305 (360)
T TIGR00858 292 LMP--SCTPIVPVIIG 305 (360)
T ss_pred cCC--CCCCEEEEEeC
Confidence 663 35667888763
No 73
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.87 E-value=2.9e-20 Score=178.57 Aligned_cols=271 Identities=20% Similarity=0.207 Sum_probs=175.4
Q ss_pred ceeEeccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh
Q 018318 33 GIELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (358)
Q Consensus 33 ~~~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt 107 (358)
.+..+++++++ +|.|.+++.+.+. .++.+..+++...| .+...++| +++++++|.+. .+++++|+
T Consensus 47 ~~~~~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~ 116 (407)
T PRK09064 47 EVTVWCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGY 116 (407)
T ss_pred eEEEEECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHH
Confidence 35567788876 7999999988764 34434444443332 34555666 78999999653 47789999
Q ss_pred HHHHHHHHhhcC--CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh---cCC
Q 018318 108 PANFAAYTAVLE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRP 182 (358)
Q Consensus 108 ~a~~~~l~a~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~---~~~ 182 (358)
+|+..++..+.. +++.|+.....|.+... .+...+.. ...++ ..|+++++++++. .++
T Consensus 117 ~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~---------~~~~~~~~--~~~~~------~~d~~~le~~l~~~~~~~~ 179 (407)
T PRK09064 117 VSNDATLSTLAKLIPDCVIFSDELNHASMIE---------GIRRSRCE--KHIFR------HNDVAHLEELLAAADPDRP 179 (407)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcchHHHHH---------HHHHcCCc--EEEEC------CCCHHHHHHHHHhccCCCC
Confidence 999988887754 77777766655554321 12223332 22232 3578899988863 356
Q ss_pred cEEEEcCCCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhccccC----CCC-CcccEEEecCCccCCCCCeeEEE
Q 018318 183 KLIICGGSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA----NPF-EYCHIVTTTTHKSLRGPRAGMIF 255 (358)
Q Consensus 183 ~~v~~~~~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~----~~~-~~~d~~~~s~~K~l~g~~gG~i~ 255 (358)
++|+++++.+ |...|+++|.++|++||+++++|++|+.|+.+..... ..+ +..|++++|++|.+ |+.||+++
T Consensus 180 ~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~ 258 (407)
T PRK09064 180 KLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIA 258 (407)
T ss_pred eEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEe
Confidence 7888876544 4677999999999999999999999987754321100 111 24689999999987 45679988
Q ss_pred EeCCCCCCCCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCc
Q 018318 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (358)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~ 334 (358)
+++ ++.+.+.....++. .++.+....++..++++.+.. ....++++.++++++++.|++.|+
T Consensus 259 ~~~---------------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~ 321 (407)
T PRK09064 259 GSA---------------ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAAGI 321 (407)
T ss_pred cCH---------------HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCC
Confidence 876 34444433222211 122333334444556665432 234467888999999999999998
Q ss_pred eeeeCCCcceEEEEEc
Q 018318 335 SLVTGGTENHLVLWDL 350 (358)
Q Consensus 335 ~~~~~~~~~~~~~v~~ 350 (358)
++.. ..++++++.+
T Consensus 322 ~~~~--~~~~iv~i~~ 335 (407)
T PRK09064 322 PVMP--NESHIVPVMV 335 (407)
T ss_pred CCCC--CCCCEEEEEe
Confidence 8764 3456666654
No 74
>PLN00175 aminotransferase family protein; Provisional
Probab=99.87 E-value=8.4e-20 Score=175.35 Aligned_cols=307 Identities=14% Similarity=0.090 Sum_probs=193.3
Q ss_pred cccccccchHHHHHHHHHHHHhhcceeEeccC-C-CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRRQCRGIELIASE-N-FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRA 86 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~-~-~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~l 86 (358)
++++..++++.+..+.+... ....+.|..+. + .+++.+.+++.+.+.... ..|+. .....+|.+.+.+++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~Lr~aia~~~ 104 (413)
T PLN00175 33 AKRLEKFKTTIFTQMSSLAI-KHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-NQYAR------GFGVPELNSAIAERF 104 (413)
T ss_pred hHHhhcCCCCHHHHHHHHhh-cCCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCCCHHHHHHHHHHH
Confidence 45566666666555544422 23456666543 2 347888888877664321 22332 122345655666777
Q ss_pred HHhcCCCCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCC
Q 018318 87 LQTFHLDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSST 165 (358)
Q Consensus 87 a~~~g~~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 165 (358)
.+.+|.+.+.- ..|++++| ++|+..++.++++|||+|++..|.|..+.. .++..|.++. .++++.++
T Consensus 105 ~~~~g~~~~~~-~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g~~~~--~v~~~~~~ 172 (413)
T PLN00175 105 KKDTGLVVDPE-KEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA---------TLSMAGAKIK--TVTLRPPD 172 (413)
T ss_pred HHHhCCCCCCC-CCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH---------HHHHcCCEEE--EEECCccc
Confidence 77777542100 12555665 579999999999999999999988765431 2345666544 44444335
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCC--CCC---cc
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE---YC 235 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~--~~~---~~ 235 (358)
+.+|++++++++.+ ++++|++++++||+ .. ++++|+++|++||+++|+|+++. .+.+.+.... .+. ..
T Consensus 173 ~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~s~~~~~~~~~~ 250 (413)
T PLN00175 173 FAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYD-KLAFEGDHISMASLPGMYER 250 (413)
T ss_pred CCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccC-ccccCCcccChhhCCCCcCc
Confidence 78999999999865 68999888888873 32 57889999999999999999953 4443321111 111 23
Q ss_pred cEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHH
Q 018318 236 HIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (358)
Q Consensus 236 d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~ 313 (358)
.+++.|++|.+ +|.|.|+++++++ +.+.+......... +.+.....++..++.. .+..++.
T Consensus 251 vi~i~SfSK~~~~~G~RiG~~v~~~~---------------l~~~l~~~~~~~~~-~~s~~~Q~a~~~~l~~-~~~~~~~ 313 (413)
T PLN00175 251 TVTMNSLGKTFSLTGWKIGWAIAPPH---------------LTWGVRQAHSFLTF-ATATPMQWAAVAALRA-PESYYEE 313 (413)
T ss_pred EEEEecchhhccCcchheeeeEeCHH---------------HHHHHHHHHhhccC-CCCHHHHHHHHHHHhC-CHHHHHH
Confidence 47889999986 5678899999873 44444332111111 1222233333333432 1122466
Q ss_pred HHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCCCCC
Q 018318 314 YAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGL 355 (358)
Q Consensus 314 ~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~~~~ 355 (358)
.++++.++++++.+.|.+.|+++.. +..++.+|+++.+.++
T Consensus 314 ~~~~~~~~~~~l~~~L~~~g~~~~~-p~g~~f~~~~~~~~~~ 354 (413)
T PLN00175 314 LKRDYSAKKDILVEGLKEVGFKVYP-SSGTYFVMVDHTPFGF 354 (413)
T ss_pred HHHHHHHHHHHHHHHHHHCCCeecC-CCeeEEEEEeccccCC
Confidence 7788888999999999999988765 5678889999865444
No 75
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.87 E-value=2.1e-20 Score=182.33 Aligned_cols=264 Identities=15% Similarity=0.113 Sum_probs=170.8
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCC------------CCCCccccccCChHHHHHHHHhhc----C---------------
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDP------------TQWGVNVQPYSGSPANFAAYTAVL----E--------------- 119 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~------------~~~~~~v~~~sGt~a~~~~l~a~~----~--------------- 119 (358)
..+...++|+.+.+|++++++..+ ..+ -+++++||.||..++.+.. .
T Consensus 123 ~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~--G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~ 200 (522)
T TIGR03799 123 TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSL--GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFA 200 (522)
T ss_pred cCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCC--eEEcCchHHHHHHHHHHHHHHhccccccccccccccchh
Confidence 345667899999999999985211 112 2556788999988876542 1
Q ss_pred -------CCCeEEEecCCCCccccccccccCCccccccccee-EEeecccCCCCCCCCHHHHHHHHhh---cCCcEEEE-
Q 018318 120 -------PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYF-ESLPYKVNSSTGYIDYDKLEEKALD---FRPKLIIC- 187 (358)
Q Consensus 120 -------~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~id~~~l~~~l~~---~~~~~v~~- 187 (358)
++..|++...+|.++. +.+...|.+. .++.+++| +++.+|+++|+++|++ .+++.+++
T Consensus 201 ~~~~~~~~~~~v~~S~~~H~S~~---------kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vv 270 (522)
T TIGR03799 201 ALKHYGYDGLAILVSERGHYSLG---------KAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELAEQNIKPLAIV 270 (522)
T ss_pred hhhhccCCceEEEECCCchHHHH---------HHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHHHCCCCcEEEE
Confidence 1235666666555432 2334445421 24445555 4789999999999863 23443322
Q ss_pred ---cCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---CcccEEEecCCccCCCCCe-eEEEEeCCC
Q 018318 188 ---GGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EYCHIVTTTTHKSLRGPRA-GMIFYRKGP 260 (358)
Q Consensus 188 ---~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~~~d~~~~s~~K~l~g~~g-G~i~~~~~~ 260 (358)
+++.+|.+.|+++|+++|+++|++++||+||+.+....+.+...+ .++|.+++++||||.+|.| |+++++++.
T Consensus 271 ataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~ 350 (522)
T TIGR03799 271 GVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPA 350 (522)
T ss_pred EEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHH
Confidence 344677889999999999999999999999876654333221112 3789999999999999988 888887641
Q ss_pred C-C-CCCCCCCCccccHHHHhh--hhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cce
Q 018318 261 K-P-PKKGQPEGAVYDFEDKIN--FAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (358)
Q Consensus 261 ~-~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~ 335 (358)
. + +.... .+...-. ......++++..... ..++++++.+...+++.++++..+++++|.+.|++. +|+
T Consensus 351 ~~~~~~~~~------~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~e 423 (522)
T TIGR03799 351 LMSAIEHHA------EYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFE 423 (522)
T ss_pred HHHHhccCc------chhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 0 0 00000 0000000 000012234444333 357889998877788999999999999999999886 899
Q ss_pred eeeCCCcceEEEEEcCCCC
Q 018318 336 LVTGGTENHLVLWDLRPLG 354 (358)
Q Consensus 336 ~~~~~~~~~~~~v~~~~~~ 354 (358)
++.+ ...+++.....|.+
T Consensus 424 l~~~-p~l~iv~Fr~~p~~ 441 (522)
T TIGR03799 424 LVTE-PELCLLTYRYVPEE 441 (522)
T ss_pred EecC-CCccEEEEEEeChh
Confidence 9873 34455555555543
No 76
>PRK08960 hypothetical protein; Provisional
Probab=99.87 E-value=1.2e-19 Score=173.16 Aligned_cols=304 Identities=13% Similarity=0.066 Sum_probs=184.9
Q ss_pred cccccccchHHHHHHHHHHHHh----hcceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRRQ----CRGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLC 82 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~ 82 (358)
+.+++++.+..+..+.+...+. ...+.|..+.. .+|+.+.+++.+.+.... .+|.. .....++.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~i 78 (387)
T PRK08960 6 SRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTA------ARGLPALREAI 78 (387)
T ss_pred hhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCC------CCCCHHHHHHH
Confidence 4455666666555554443332 24567776544 358899999887765321 12322 12233454444
Q ss_pred HHHHHHhcC--CCCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeec
Q 018318 83 RSRALQTFH--LDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY 159 (358)
Q Consensus 83 ~~~la~~~g--~~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (358)
.+++.+.+| ++++ .|++++| ++|+..++.++++|||+|++..|+|.++.. .+...|..+..+++
T Consensus 79 a~~~~~~~g~~~~~~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~---------~~~~~g~~~~~v~~ 145 (387)
T PRK08960 79 AGFYAQRYGVDVDPE----RILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH---------FLRLVEGAAQLVPV 145 (387)
T ss_pred HHHHHHHhCCCCChh----hEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---------HHHhcCCeEEEEec
Confidence 455555445 3443 2445555 679999999999999999999998876542 22345655444444
Q ss_pred ccCCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC
Q 018318 160 KVNSS-TGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE 233 (358)
Q Consensus 160 ~~~~~-~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~ 233 (358)
+.+ ++.+|++++++++++ +++++++++++|| ...+ +++|+++|++||+++++|+++ .++.+.+.....+.
T Consensus 146 --~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y-~~~~~~~~~~~~~~ 221 (387)
T PRK08960 146 --GPDSRYQLTPALVERHWNA-DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIY-HGLTYGVDAASVLE 221 (387)
T ss_pred --CcccCCCCCHHHHHHHhCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCChhh
Confidence 422 457999999998865 5677777778777 3333 667888899999999999995 34443221111112
Q ss_pred -c-ccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH
Q 018318 234 -Y-CHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP 309 (358)
Q Consensus 234 -~-~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~ 309 (358)
. --+++.|++|.+ +|.|.|+++++++ +.+.+.........+ .+.....+...++......
T Consensus 222 ~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~---------------~~~~~~~~~~~~~~~-~s~~~q~a~~~~l~~~~~~ 285 (387)
T PRK08960 222 VDDDAFVLNSFSKYFGMTGWRLGWLVAPPA---------------AVPELEKLAQNLYIS-ASTPAQHAALACFEPETLA 285 (387)
T ss_pred ccCCEEEEeecccccCCcccEEEEEEcCHH---------------HHHHHHHHHhhhccC-CCHHHHHHHHHHhhcCcHH
Confidence 2 237889999986 5678899999873 444443322111111 1222222222333211112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 310 AFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 310 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
.+...++++.++++.+.+.|++.|+.+...+..+..+|+++..
T Consensus 286 ~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~ 328 (387)
T PRK08960 286 ILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISA 328 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccc
Confidence 2355667788888999999998888754334567889998754
No 77
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=1.5e-20 Score=178.75 Aligned_cols=225 Identities=18% Similarity=0.212 Sum_probs=155.2
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
+|.++++ +.+....|| +++++++|++. .+.++||+.|+..++.++++|||+|++..+.|++.+....
T Consensus 50 ~~~y~r~--~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~-- 116 (391)
T TIGR01328 50 GYIYSRL--GNPTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLE-- 116 (391)
T ss_pred CCceeCC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHH--
Confidence 4545554 456777888 78999999986 3778999999999999999999999999988765432110
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
..+...|+ .+..++. -|++++++++.+ ++++|++++++++ .+.|+++|.++|+++|+++++|++|+
T Consensus 117 ---~~~~~~G~--~~~~vd~------~d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a 184 (391)
T TIGR01328 117 ---HALTKFGI--QVDFINM------AIPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFA 184 (391)
T ss_pred ---HHHhcCCe--EEEEECC------CCHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 01123443 4444432 278999998865 7899998887766 56799999999999999999999987
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.+... .++. ++|++++|++|+++|+. ||+++.++ ++.+.+.........|....+.
T Consensus 185 ~~~~~-----~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~---------------~li~~l~~~~~~~~~g~~l~~~ 244 (391)
T TIGR01328 185 TPMLT-----NPVALGVDVVVHSATKYIGGHGDVVAGLICGKA---------------ELLQQIRMVGIKDMTGSVISPF 244 (391)
T ss_pred hhccC-----CchhcCCCEEEccccccccCCCCceEEEEEcCH---------------HHHHHHHHHHHHhCCCCCCCcH
Confidence 66432 3444 89999999999997653 68877765 3444443211111112222222
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cce
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~ 335 (358)
.+ +.+++.+ +.+..++++..+|++++.++|+++ +++
T Consensus 245 ~a--~l~l~~L--~tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 245 DA--WLILRGL--KTLNIRMKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HH--HHHHhCc--CcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 22 2233332 235677899999999999999987 443
No 78
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.86 E-value=3.9e-21 Score=182.49 Aligned_cols=270 Identities=12% Similarity=0.035 Sum_probs=176.3
Q ss_pred cceeEeccCCCCCHH-HHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCcccccc-CChHH
Q 018318 32 RGIELIASENFTSFA-VIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPY-SGSPA 109 (358)
Q Consensus 32 ~~~~l~a~~~~~~~~-V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~-sGt~a 109 (358)
+.+.|.++++.++|. |++|+...+... .++ +.++...++ .+|+.+++++|++.+. ..++++ |||.+
T Consensus 12 ~~~~f~~Gp~~~~~~~v~~a~~~~~~~~--------~hr-~~~f~~~~~-~~r~~l~~l~~~~~~~--~v~~~~gs~T~~ 79 (378)
T PRK03080 12 ADPRFSSGPCKKRPGWQLEALADALLGR--------SHR-QKPVKALLK-RVIEGTRELLSLPEGY--EVGIVPGSDTGA 79 (378)
T ss_pred CCCCcCCCCcCCChHHHHHHHHhhhccc--------CcC-CHHHHHHHH-HHHHHHHHHhCCCCCc--eEEEECCchHHH
Confidence 456788999999888 999998654321 111 235665664 7899999999985421 124344 78899
Q ss_pred HHHHHHhhcCC-CCeEEEecCCCCccccccccccCCccc-ccccc-eeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEE
Q 018318 110 NFAAYTAVLEP-HDRIMGLDLPSGGHLTHGYYTSGGKKI-SATSI-YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186 (358)
Q Consensus 110 ~~~~l~a~~~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~~g~-~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~ 186 (358)
+.+++.+++++ ++.|++ ..+|++.+. ..+ +..|. .++.+.. + .+..+|+++++ . +++|.
T Consensus 80 ~~~~~~~l~~~~~~~vi~-~g~f~~~~~--------~~~~~~~g~~~v~~~~~--~-~g~~~d~~~i~----~--~~~V~ 141 (378)
T PRK03080 80 WEMALWSLLGARRVDHLA-WESFGSKWA--------TDVVKQLKLEDPRVLEA--D-YGSLPDLSAVD----F--DRDVV 141 (378)
T ss_pred HHHHHHhcCCCCcceEEE-eCHHHHHHH--------HHHHhhcCCCCceEecc--C-CCCCCCHhhcC----C--CCCEE
Confidence 99999999875 444444 455554321 001 23454 4444433 3 24577877633 2 45566
Q ss_pred EcCC--CCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeCCCCC-
Q 018318 187 CGGS--AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP- 262 (358)
Q Consensus 187 ~~~~--~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~- 262 (358)
+++. .+|...|+++|++ |++|++++||++|+.|.. +.+++.+|++++|+||||+||.| |+++.+++..+
T Consensus 142 ~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~-----pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~ 214 (378)
T PRK03080 142 FTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFAL-----PLDWSKLDVYTFSWQKVLGGEGGHGMAILSPRAVER 214 (378)
T ss_pred EEecCCccceeccchhhcc--ccCCCeEEEecccccccC-----CCCHHHCcEEEEehhhhCCCCCceEEEEECHHHHHh
Confidence 6543 4577889999999 889999999999998864 23444789999999999999988 99999875422
Q ss_pred CCC--CCCCCc-cccHHH---HhhhhcCCCCcCCCChhHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHhhCC-c
Q 018318 263 PKK--GQPEGA-VYDFED---KINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKG-Y 334 (358)
Q Consensus 263 ~~~--~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~G-~ 334 (358)
+.+ .+.... ..++.. .+.......+.++++...+.++.++++.+.+. +++.+.+|..+++++++++|++.| +
T Consensus 215 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~ 294 (378)
T PRK03080 215 LESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWA 294 (378)
T ss_pred hhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 221 111010 001111 11111111223456666777778899988765 678999999999999999999986 6
Q ss_pred eeee
Q 018318 335 SLVT 338 (358)
Q Consensus 335 ~~~~ 338 (358)
+++.
T Consensus 295 ~~~~ 298 (378)
T PRK03080 295 TPLV 298 (378)
T ss_pred cccc
Confidence 6663
No 79
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.86 E-value=1.4e-20 Score=177.07 Aligned_cols=245 Identities=16% Similarity=0.189 Sum_probs=166.6
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccc
Q 018318 69 YGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 148 (358)
Q Consensus 69 ~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 148 (358)
|.|++...+|| +.+++++|.++ .+.++||+.|++.++...++|||.| +++.| +.... ..+.
T Consensus 67 yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~---f~Tt~-----ahIe 127 (450)
T TIGR02618 67 YAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMY---FTTTR-----YHQE 127 (450)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCcee---HHHHH-----HHHH
Confidence 45666677898 77899999997 4778999999887766668999987 44332 11110 0123
Q ss_pred cccceeEEeecccC---------CCCCCCCHHHHHHHHhhcC---CcEEEEcCCCC---CCc---cchHHHHHHHHHhCC
Q 018318 149 ATSIYFESLPYKVN---------SSTGYIDYDKLEEKALDFR---PKLIICGGSAY---PRD---WDYARFRAVADKCGA 210 (358)
Q Consensus 149 ~~g~~~~~~~~~~~---------~~~~~id~~~l~~~l~~~~---~~~v~~~~~~~---~~~---~~l~~i~~la~~~g~ 210 (358)
..|. .++.+..+ +.++.+|+++++++|.+.. +++|++..+++ |.+ .++++|.++|++||+
T Consensus 128 ~~Ga--v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl 205 (450)
T TIGR02618 128 KNGA--TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGI 205 (450)
T ss_pred hCCe--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCC
Confidence 3443 22222111 2368899999999997532 23444433332 455 458999999999999
Q ss_pred EEEEechhhhhhhh------ccccCCCC--------CcccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHH
Q 018318 211 LLLCDMAHISGLVA------AQEAANPF--------EYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFE 276 (358)
Q Consensus 211 ~lvvD~a~~~g~~~------~~~~~~~~--------~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~ 276 (358)
.||.|+||+.|-.+ .+....++ +++|.+++|++|...+|.||+++++++ ++.
T Consensus 206 ~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~--------------~l~ 271 (450)
T TIGR02618 206 KVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD--------------EMF 271 (450)
T ss_pred EEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH--------------HHH
Confidence 99999999885211 11111222 378999999999988899999998886 566
Q ss_pred HHhhhh--cCCCC--cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 277 DKINFA--VFPSL--QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 277 ~~~~~~--~~~~~--~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
++++.. .+.++ .|+.....+.+++.++.+..+ ..+.++...++++|.+.|.+.|+++.. +..+|.++||+..
T Consensus 272 ~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~-p~ggh~V~vda~~ 347 (450)
T TIGR02618 272 QSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVE-PVGGHAVFLDARR 347 (450)
T ss_pred HHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccC-CCCcceEEEEhHH
Confidence 655543 22221 122233456667777776543 366777788899999999999999964 6789999999875
No 80
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.2e-20 Score=178.47 Aligned_cols=222 Identities=19% Similarity=0.204 Sum_probs=156.2
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
+|.++|+ +.+....|| ++++++.|.+. .+++++|++|+..++.+++++||+|+++.+.|++.+....
T Consensus 44 ~~~Y~R~--~npt~~~Le----~~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~-- 110 (388)
T PRK08861 44 KYDYTRS--GNPNRGLLE----QTLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFN-- 110 (388)
T ss_pred CccccCC--CCchHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHH--
Confidence 3445554 456777888 78999999754 3667777889999999999999999999988875431110
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
......| +++..++ ..|++++++++.+ ++++|++++++|| ...|+++|.++|+++|+++++|++++
T Consensus 111 ---~~~~~~g--i~v~~vd------~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~ 178 (388)
T PRK08861 111 ---TRANKGD--FKVQFVD------QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFL 178 (388)
T ss_pred ---HHHhcCC--eEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcc
Confidence 0011122 3444442 3689999999875 7899999888876 57799999999999999999999987
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.++. ..+++ ++|++++|+||+++|+. ||+++++++ ++.+++...... .|....+
T Consensus 179 ~~~~-----~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~--------------~~~~~~~~~~~~--~G~~~~p- 236 (388)
T PRK08861 179 TPVL-----QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTK--------------EHAEELAWWGNC--IGATGTP- 236 (388)
T ss_pred cccc-----CCCcccCCCEEEeecceeccCCCcceeEEEEecHH--------------HHHHHHHHHHhc--cCCCCCh-
Confidence 6643 24556 89999999999998874 688877664 454444432211 1211111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
.. .+..++-+ +-+.-+++++.+|+..+.++|+++.
T Consensus 237 ~~-a~l~~rgl--~Tl~lR~~~~~~~a~~~a~~L~~~p 271 (388)
T PRK08861 237 FD-SYMTLRGI--RTLGARMRVHEESAQQILAYLQTQS 271 (388)
T ss_pred HH-HHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 11 12333333 2467889999999999999999884
No 81
>PRK12414 putative aminotransferase; Provisional
Probab=99.86 E-value=1.5e-19 Score=172.24 Aligned_cols=304 Identities=15% Similarity=0.166 Sum_probs=187.2
Q ss_pred cccccccchHHHHHHHHHHHHhhcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRA 86 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~l 86 (358)
+.++..+..++........ .....+.|..+... +++.+.+++.+.+.... ..|+. ......+.+.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~l 79 (384)
T PRK12414 8 RSKLPDVGTTIFTVIGQLA-AQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQYAP------MAGIAALREALAEKT 79 (384)
T ss_pred HHhcccCCccHHHHHHHHH-HhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCcCC------CCCcHHHHHHHHHHH
Confidence 3445455555444433322 23345777765443 37888888776554321 22322 122335555667889
Q ss_pred HHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCC
Q 018318 87 LQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG 166 (358)
Q Consensus 87 a~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 166 (358)
++++|++.+.....++++++++|+..++.+++.|||+|++..|+|..+.. .++..|.. ++.++.+.+++
T Consensus 80 ~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g~~--~~~v~~~~~~~ 148 (384)
T PRK12414 80 ERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAP---------IVRLQGAT--PVAIKLSPEDF 148 (384)
T ss_pred HHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHH---------HHHHcCCE--EEEEecCcccc
Confidence 99999852100013445555679999999999999999999998765321 23345654 44445443456
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C---cc
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E---YC 235 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~---~~ 235 (358)
.+|++++++++++ ++++|++++++||+ . .++++|.++|++||+++++|+++. .+.+.+....++ . +-
T Consensus 149 ~~d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~ 226 (384)
T PRK12414 149 RVNWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYE-HVVFDGARHHSMARHRELAER 226 (384)
T ss_pred ccCHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhh-hccCCCCCccCcccCcCccCc
Confidence 8999999999864 78999888888773 2 468899999999999999999954 333322111122 1 12
Q ss_pred cEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHH
Q 018318 236 HIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (358)
Q Consensus 236 d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~ 313 (358)
.+++.|++|.+ +|.|.|+++++++ +.+.+.........+ .+.....++..++.. ...+..
T Consensus 227 ~i~~~SfSK~~~~pGlRiG~~v~~~~---------------l~~~l~~~~~~~~~~-~s~~~q~a~~~~l~~--~~~~~~ 288 (384)
T PRK12414 227 SVIVSSFGKSYHVTGWRVGYCLAPAE---------------LMDEIRKVHQFMVFS-ADTPMQHAFAEALAE--PASYLG 288 (384)
T ss_pred EEEEecccccccCccceEEEEecCHH---------------HHHHHHHHHhheecC-CCcHHHHHHHHHhcC--ChHHHH
Confidence 38899999976 5778899998873 444444322111111 122222222222221 122344
Q ss_pred HHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 314 YAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 314 ~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
..+.+.++++.+.+.|++.|+++.. +..+..+|+++.+
T Consensus 289 ~~~~~~~~r~~l~~~L~~~g~~~~~-~~gg~~~~~~~~~ 326 (384)
T PRK12414 289 LGAFYQRKRDLLARELAGSRFELLP-SEGSFFMLARFRH 326 (384)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeecC-CCcceEEEEcccc
Confidence 5667788889999999999988764 5677889988764
No 82
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.86 E-value=7.3e-21 Score=178.99 Aligned_cols=272 Identities=13% Similarity=0.092 Sum_probs=180.1
Q ss_pred cceeEeccCCCCCHHHHHHHhcccccCC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHH
Q 018318 32 RGIELIASENFTSFAVIEALGSALTNKY--SEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA 109 (358)
Q Consensus 32 ~~~~l~a~~~~~~~~V~~a~~~~~~~~~--~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a 109 (358)
+.+.|+|+++.+|++|++|+...+.... +.|.....++ ..++.+.++ .+++.+++++|++.+.. +.+...+|+.|
T Consensus 3 ~~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr-~~~f~~~~~-~~~~~l~~l~~~~~~~~-v~~~~gsgt~~ 79 (360)
T PRK05355 3 RVYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHR-SKEFEAVAE-EAEADLRELLNIPDNYK-VLFLQGGASLQ 79 (360)
T ss_pred ceeeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCC-CHHHHHHHH-HHHHHHHHHhCCCCCcE-EEEEcCCchHH
Confidence 3457889999999999999988763211 1111111121 335555564 78899999999843211 33444677889
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHH-HHhhcCCcEEEEc
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEE-KALDFRPKLIICG 188 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~-~l~~~~~~~v~~~ 188 (358)
+.+++.+++.+||++++... |.+++.+. ..++..|.. ..+.. +...+..+..++++ ++++ ++++|.+.
T Consensus 80 ~Ea~~~nl~~~g~~~l~i~~---G~fg~r~~----~~a~~~g~~-~~~~~--~~~~g~~~~~~~~~~~l~~-~~~~V~~t 148 (360)
T PRK05355 80 FAMVPMNLLGGGKKADYVDT---GSWSKKAI----KEAKKYGEV-NVAAS--SEDDGFTYIPPLDEWQLSD-DAAYVHYT 148 (360)
T ss_pred HHHHHHhcCCCCCeEEEEEC---CHHHHHHH----HHHHHhCCc-eEEec--ccccCCCCCCChhhccCCC-CCCEEEEc
Confidence 99999999999999988763 33333221 122334532 22222 21244555555555 6654 68888776
Q ss_pred CCC--CCCcc-chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeCCCCC-C
Q 018318 189 GSA--YPRDW-DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-P 263 (358)
Q Consensus 189 ~~~--~~~~~-~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~ 263 (358)
+.. +|... |+++| +|++++||++|+.|.. +.+++..|++++|+||++ ||+| |+++.+++..+ +
T Consensus 149 h~eTstGv~~~~i~~i------~g~l~vVDavss~g~~-----~idv~~~d~~~~ssqK~l-gP~Glg~l~~s~~~l~~~ 216 (360)
T PRK05355 149 SNETIDGTEFHELPDT------GDVPLVADMSSDILSR-----PIDVSKFGLIYAGAQKNI-GPAGLTIVIVREDLLGRA 216 (360)
T ss_pred cCCCcceEecCccccc------CCCcEEEEcCccccCc-----cCCHHHccEEEEeccccc-cCCceEEEEECHHHHhhc
Confidence 544 45555 67666 8999999999998864 234446689999999987 6998 89998886432 2
Q ss_pred CCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHhhCCc
Q 018318 264 KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKGY 334 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~G~ 334 (358)
.+.-..+ .++....... ...++|+.+.+.++.++++.+..+ +++.+.+++.+++++++++|++.|+
T Consensus 217 ~~~~~~~--~~~~~~~~~~---~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~ 283 (360)
T PRK05355 217 LPSIPSM--LDYKTHADND---SMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDF 283 (360)
T ss_pred ccCCChH--HHHHHHHhcC---CccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2210101 0222222211 123678999999999999998877 6899999999999999999999985
No 83
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.1e-20 Score=179.15 Aligned_cols=214 Identities=17% Similarity=0.170 Sum_probs=150.5
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+.+.+|| +.+++++|.+. .+++++|+.|+..++.++++|||+|+++.+.|++..... ..+...
T Consensus 51 ~np~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~------~~~~~~ 115 (385)
T PRK08574 51 ENPTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLL------KSLEKF 115 (385)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH------HHhhcc
Confidence 456777888 78999999875 366889999999999999999999999998887643211 011223
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|. .+..+ .+|+++++++++++++++|+++.++|| ...|+++|.++||++|+++++|++|+.|+..
T Consensus 116 g~--~v~~~-------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~---- 182 (385)
T PRK08574 116 GV--KVVLA-------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY---- 182 (385)
T ss_pred Cc--EEEEE-------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC----
Confidence 33 22222 256899999987547899998887776 4679999999999999999999999877543
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
.++. ++|++++|++|+++|+. ||++++.++ ++.+++...... .|....+..+ +.+++
T Consensus 183 -~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~--------------~~~~~~~~~~~~--~g~~~~p~~a--~l~l~ 243 (385)
T PRK08574 183 -RPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG--------------EFLEELWEWRRR--LGTIMQPFEA--YLVLR 243 (385)
T ss_pred -ChhhhCCcEEEeeCceeecCCCCceeEEEEECcH--------------HHHHHHHHHHHh--cCCCCCHHHH--HHHHc
Confidence 2334 89999999999998763 686666553 444444322111 1211111112 23333
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
.+ +.+..++++..+|+.++.++|+++.
T Consensus 244 ~l--~tL~~R~~~~~~na~~la~~L~~~p 270 (385)
T PRK08574 244 GL--KTLEVRFERQCRNAMAIAEFLSEHP 270 (385)
T ss_pred cc--CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33 2467888999999999999999873
No 84
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=3.8e-20 Score=177.86 Aligned_cols=270 Identities=20% Similarity=0.183 Sum_probs=174.2
Q ss_pred eeEeccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChH
Q 018318 34 IELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (358)
Q Consensus 34 ~~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~ 108 (358)
.....+++++ +|.|++++.+.+. .++.+..+++.+.+. +...+|| +++++++|.+. .++++||+.
T Consensus 48 ~~~~~sn~yl~l~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~ 117 (410)
T PRK13392 48 VTIWCSNDYLGMGQHPDVIGAMVDALD-RYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYV 117 (410)
T ss_pred EEEEECCCccCCCCCHHHHHHHHHHHH-HcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHH
Confidence 4455677765 6999999988764 444444444433333 3445666 78999999754 477899999
Q ss_pred HHHHHHHhhc--CCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh---cCCc
Q 018318 109 ANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRPK 183 (358)
Q Consensus 109 a~~~~l~a~~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~---~~~~ 183 (358)
|+..++..+. .+||.|++....|.+.+. .+...|..+ ..++ ..|++++++.+++ .+++
T Consensus 118 a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~---------~~~~~g~~~--~~~~------~~d~~~l~~~l~~~~~~~t~ 180 (410)
T PRK13392 118 SNDAALSTLGKLLPGCVILSDALNHASMIE---------GIRRSGAEK--QVFR------HNDLADLEEQLASVDPDRPK 180 (410)
T ss_pred HHHHHHHHHhcCCCCCEEEEehhhhHHHHH---------HHHHcCCeE--EEEe------CCCHHHHHHHHHhccCCCCE
Confidence 9988888774 489988877766655431 223455433 2232 1356666666643 3578
Q ss_pred EEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccc--cC--CC-CCcccEEEecCCccCCCCCeeEEEE
Q 018318 184 LIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQE--AA--NP-FEYCHIVTTTTHKSLRGPRAGMIFY 256 (358)
Q Consensus 184 ~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~--~~--~~-~~~~d~~~~s~~K~l~g~~gG~i~~ 256 (358)
+|++++++++ ...|+++|.++|++||+++++|++|+.|...... .. .. .+..|+++.|++|++++ .||++++
T Consensus 181 ~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~GG~~~~ 259 (410)
T PRK13392 181 LIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-LGGYIAA 259 (410)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-ccchhhc
Confidence 8888877654 5779999999999999999999999877643211 10 01 12578999999999854 5688877
Q ss_pred eCCCCCCCCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCce
Q 018318 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYS 335 (358)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~ 335 (358)
++ ++.+.+.....++. .++.++...++..++++.... .....+++.++++++++.|++.|++
T Consensus 260 ~~---------------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~ 322 (410)
T PRK13392 260 SA---------------DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNANGIP 322 (410)
T ss_pred CH---------------HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 65 34444443222211 122233345555566765432 2345577889999999999999998
Q ss_pred eeeCCCcceEEEEEc
Q 018318 336 LVTGGTENHLVLWDL 350 (358)
Q Consensus 336 ~~~~~~~~~~~~v~~ 350 (358)
+.. +.++.+.+.+
T Consensus 323 ~~~--~~~~~~~i~~ 335 (410)
T PRK13392 323 VMP--SPSHIVPVMV 335 (410)
T ss_pred CCC--CCCCEEEEEe
Confidence 764 3455554443
No 85
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=3.4e-20 Score=175.51 Aligned_cols=185 Identities=16% Similarity=0.087 Sum_probs=133.8
Q ss_pred CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCC
Q 018318 42 FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEP 120 (358)
Q Consensus 42 ~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~ 120 (358)
.++++.++++.+.+.+.+- .+..+.+.++| +++++++|.+. .++++||++|+..++.++ ++|
T Consensus 8 ~~~~~e~~a~~~~~~~~~~--------~~~g~~~~~~e----~~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~p 70 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGKL--------SGDGPFSRRCE----TWLENRTGTKK-----ALLTPSCTAALEMAALLLDIQP 70 (376)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCCcHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 3466778888776654321 11124566777 77888999875 366778889999988888 899
Q ss_pred CCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHH
Q 018318 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYAR 200 (358)
Q Consensus 121 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~ 200 (358)
||+|++++++|.+... .+...|+ ++++++++.+++.+|++++++++.+ ++++|+..+ .+|...|+++
T Consensus 71 Gd~Viv~~~t~~~~~~---------~~~~~G~--~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~-~~G~~~d~~~ 137 (376)
T TIGR02379 71 GDEVIMPSYTFVSTAN---------AFVLRGA--KIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVH-YAGVACDMDT 137 (376)
T ss_pred cCEEEECCCCcHHHHH---------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeC-CCCCccCHHH
Confidence 9999999988765321 2334565 4556666655678999999999875 789887554 3677789999
Q ss_pred HHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCC--ccC-CCCCeeEEEEeCC
Q 018318 201 FRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTH--KSL-RGPRAGMIFYRKG 259 (358)
Q Consensus 201 i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~--K~l-~g~~gG~i~~~~~ 259 (358)
|.++|++||+++|+|++|+.|..+.+. ++. ..|+.++|+| |.+ .|++||+++++++
T Consensus 138 I~~la~~~~i~vIeDaa~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~ 197 (376)
T TIGR02379 138 IMALANKHQLFVIEDAAQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQ 197 (376)
T ss_pred HHHHHHHCCCEEEEECccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCH
Confidence 999999999999999999887544332 222 3477777766 545 4668999988864
No 86
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=9e-20 Score=175.00 Aligned_cols=271 Identities=20% Similarity=0.193 Sum_probs=176.9
Q ss_pred ceeEeccCCCC----CHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh
Q 018318 33 GIELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (358)
Q Consensus 33 ~~~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt 107 (358)
.+..+++++++ +|+|++++.+.+. +++.+..+++...+. +...++| +++++++|.+. .++++||+
T Consensus 46 ~~~~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG~ 115 (406)
T PRK13393 46 EVTVWCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSGY 115 (406)
T ss_pred cEEEeecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcH
Confidence 45667788886 7999999998875 454444444433332 3445666 88999999754 47789999
Q ss_pred HHHHHHHHhhcC--CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh---cCC
Q 018318 108 PANFAAYTAVLE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRP 182 (358)
Q Consensus 108 ~a~~~~l~a~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~---~~~ 182 (358)
+|+..++..+.+ +||.|+.....|++.+. .+...|.. ...++ ..|++++++.++. .++
T Consensus 116 ~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~---------~~~~~g~~--~~~~~------~~d~~~l~~~l~~~~~~~~ 178 (406)
T PRK13393 116 VSNWAALSTLGSRLPGCVILSDELNHASMIE---------GIRHSRAE--KRIFR------HNDPADLERKLSDLDPHRP 178 (406)
T ss_pred HHHHHHHHHhhcCCCCCEEEEccchhHHHHH---------HHHHcCCe--EEEeC------CCCHHHHHHHHHhccCCCC
Confidence 999999987754 78877777777765431 12334432 23332 3578888888763 246
Q ss_pred cEEEEcCCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhcccc--CC--CC-CcccEEEecCCccCCCCCeeEEE
Q 018318 183 KLIICGGSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA--AN--PF-EYCHIVTTTTHKSLRGPRAGMIF 255 (358)
Q Consensus 183 ~~v~~~~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~--~~-~~~d~~~~s~~K~l~g~~gG~i~ 255 (358)
++|+++++. .|...|+++|.++|++||+++++|++|+.|+.+.... .. .+ ...|++++|++|.++ ..||+++
T Consensus 179 ~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g-~~GG~~~ 257 (406)
T PRK13393 179 KLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFG-VMGGYIT 257 (406)
T ss_pred EEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhc-ccCceee
Confidence 778777654 4567899999999999999999999999776432111 00 11 146888999999985 4678888
Q ss_pred EeCCCCCCCCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCc
Q 018318 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (358)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~ 334 (358)
+++ ++.+.+.....++. .++.++...++..++++.+... ....++..++++++++.|++.|+
T Consensus 258 ~~~---------------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~ 320 (406)
T PRK13393 258 GSA---------------ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS--SAERERHQDRVARLRARLDKAGI 320 (406)
T ss_pred CCH---------------HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHcCC
Confidence 766 34444443222221 2233334455556667665322 22346678889999999998888
Q ss_pred eeeeCCCcceEEEEEc
Q 018318 335 SLVTGGTENHLVLWDL 350 (358)
Q Consensus 335 ~~~~~~~~~~~~~v~~ 350 (358)
++.. ..++++.+.+
T Consensus 321 ~~~~--~~~~i~~v~~ 334 (406)
T PRK13393 321 PHLP--NPSHIVPVMV 334 (406)
T ss_pred CcCC--CCCCeEEEEe
Confidence 7654 3455555543
No 87
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.86 E-value=1e-19 Score=174.07 Aligned_cols=263 Identities=21% Similarity=0.199 Sum_probs=171.1
Q ss_pred ceeEeccC--CC-CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHH
Q 018318 33 GIELIASE--NF-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA 109 (358)
Q Consensus 33 ~~~l~a~~--~~-~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a 109 (358)
.+.|..+. .. .+|.+.+++.+.+.. ++.++++.++..|.. .+.+.+++++++++|.+. .+++++|+++
T Consensus 44 ~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~---~l~~~l~~~la~~~g~~~-----~i~~tsG~~a 114 (397)
T PRK06939 44 VINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRFICGTQ---DLHKELEEKLAKFLGTED-----AILYSSCFDA 114 (397)
T ss_pred EEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccccccCCc---HHHHHHHHHHHHHhCCCc-----EEEEcChHHH
Confidence 35555432 22 478899988877643 222343333333432 222344588999999764 3677889889
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh---c--CCcE
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---F--RPKL 184 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~---~--~~~~ 184 (358)
+..++.++++|||.|++..+.|.++.. .+...+.. ++.++ ..|++++++++++ . ++++
T Consensus 115 ~~~~~~~l~~~gd~vi~~~~~~~~~~~---------~~~~~~~~--~~~~~------~~d~~~l~~~i~~~~~~~~~~~~ 177 (397)
T PRK06939 115 NGGLFETLLGKEDAIISDALNHASIID---------GVRLCKAK--RYRYA------NNDMADLEAQLKEAKEAGARHKL 177 (397)
T ss_pred HHHHHHHhCCCCCEEEEEhhhhHHHHH---------HHHhcCCc--eEEeC------CCCHHHHHHHHHhhhccCCCCeE
Confidence 999999999999999999988765431 12334432 33332 2688999988864 2 5667
Q ss_pred EEEcCC--CCCCccchHHHHHHHHHhCCEEEEechhhhhhhhc-cc--cC-CCCC-cccEEEecCCccCCCCCeeEEEEe
Q 018318 185 IICGGS--AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE--AA-NPFE-YCHIVTTTTHKSLRGPRAGMIFYR 257 (358)
Q Consensus 185 v~~~~~--~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~-~~--~~-~~~~-~~d~~~~s~~K~l~g~~gG~i~~~ 257 (358)
|+++.. ..|...++++|.++|++||+++|+|++|+.|.... +. .. ..+. ++|++++|+||+++|+++|+++++
T Consensus 178 v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~ 257 (397)
T PRK06939 178 IATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGR 257 (397)
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeC
Confidence 776533 34556789999999999999999999986664322 10 00 1122 578999999999988899999987
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCcee
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~ 336 (358)
++ +.+.+.....+.. .+++.....+++.++++.+. .....++++.++++++++.|.+.|+++
T Consensus 258 ~~---------------~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~ 320 (397)
T PRK06939 258 KE---------------VIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAAGFTL 320 (397)
T ss_pred HH---------------HHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 73 4454443222222 22223333444445555542 234667888899999999999888876
Q ss_pred ee
Q 018318 337 VT 338 (358)
Q Consensus 337 ~~ 338 (358)
..
T Consensus 321 ~~ 322 (397)
T PRK06939 321 GP 322 (397)
T ss_pred CC
Confidence 54
No 88
>PLN02263 serine decarboxylase
Probab=99.86 E-value=2.6e-19 Score=170.48 Aligned_cols=243 Identities=18% Similarity=0.181 Sum_probs=169.0
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCC-CCccccccCChHHHHHHHHhhcC--CCCeEEEecCCCCccccccccccCCcccccc
Q 018318 74 FIDEIENLCRSRALQTFHLDPTQ-WGVNVQPYSGSPANFAAYTAVLE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 74 ~~~~le~~~~~~la~~~g~~~~~-~~~~v~~~sGt~a~~~~l~a~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
...++|+++.+|+++++|.++++ +| +++++||++|..++.+..+ +...++++.-.| ++.. +.+.+.
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH---~Sv~------KAa~ll 198 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRESH---YSVF------KAARMY 198 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCcc---HHHH------HHHHhc
Confidence 35689999999999999997633 44 5578889999998877633 333555555444 3332 345667
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcC--CcEEEE--cCCCCCCccchHHHHHHHHHhCC-----EEEEechhhhh
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFR--PKLIIC--GGSAYPRDWDYARFRAVADKCGA-----LLLCDMAHISG 221 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~--~~~v~~--~~~~~~~~~~l~~i~~la~~~g~-----~lvvD~a~~~g 221 (358)
|.+++.++ ++ +++.+|+++|+++|.+++ |-+|+. +++..|.+.|+++|+++|+++|+ |++||+|.+ |
T Consensus 199 gi~~~~Vp--~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~G-G 274 (470)
T PLN02263 199 RMECVKVD--TL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALF-G 274 (470)
T ss_pred CCcceEec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccch-h
Confidence 77555444 44 478999999999997654 444433 45667788999999999999997 999999954 5
Q ss_pred hhhc-cccC--CCCC-cccEEEecCCccCCCCCe-eEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHH
Q 018318 222 LVAA-QEAA--NPFE-YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (358)
Q Consensus 222 ~~~~-~~~~--~~~~-~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (358)
++.. -... ..+. .+|.++.++|||++.|.+ |++++++.... .-. .-.+++... .+...++.+....
T Consensus 275 ~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~--~~~------~~~~Yl~~~-d~ti~gSR~g~~a 345 (470)
T PLN02263 275 LMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHIN--VLS------SNVEYLASR-DATIMGSRNGHAP 345 (470)
T ss_pred hHhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhhHh--hhc------cChHhhCCC-CCCcCCCCCcHHH
Confidence 4331 1111 1222 599999999999988865 88888864210 000 001112211 1234455554445
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCC
Q 018318 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (358)
Q Consensus 297 ~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~ 340 (358)
+.++.+++.+..+++.+++++..++++++.+.|++.|+.++.++
T Consensus 346 l~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p 389 (470)
T PLN02263 346 IFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNE 389 (470)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCC
Confidence 67788999888788999999999999999999999999887643
No 89
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.86 E-value=1.2e-19 Score=173.98 Aligned_cols=282 Identities=20% Similarity=0.207 Sum_probs=191.0
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~ 113 (358)
.....+++.+++...+++...+.... +.++ -.+...++|+.+..+++++++.+... +-.++++||+||..+
T Consensus 65 ~~~~~~~~~~~~~a~~~~~~~~~~nl--~d~~-----~~p~a~~~E~~~v~~l~~l~~~~~~~--~G~~t~GgTean~la 135 (460)
T COG0076 65 NLAGFCPTRVPPVAAELLVSALNKNL--GDPD-----ESPAAAELEERVVNMLSDLLGAPEEA--SGTFTSGGTEANLLA 135 (460)
T ss_pred EEEccCCCCCHHHHHHHHHHHHhhcC--CCcc-----cChhHHHHHHHHHHHHHHHhCCCCCC--ceEEEcChHHHHHHH
Confidence 34445677778888888887775433 2211 12356689999999999999996432 235677889999988
Q ss_pred HHhh---cC--CC---C------eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh
Q 018318 114 YTAV---LE--PH---D------RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD 179 (358)
Q Consensus 114 l~a~---~~--~g---d------~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~ 179 (358)
+.+. +. .+ . +|+++.- +|++.. +.+.+.|.+.+.++.+- .+..+|++++++++++
T Consensus 136 l~aar~~~~~~~~~~~~~~~~~P~ii~s~~---aH~s~~------Kaa~~lG~~~~~v~~~~--~~~~id~~~l~~~i~~ 204 (460)
T COG0076 136 LLAARERWRKRALAESGKPGGKPNIVCSET---AHFSFE------KAARYLGLGLRRVPTVP--TDYRIDVDALEEAIDE 204 (460)
T ss_pred HHHHHHHHHHHhhhcccccCCCCeEEecCc---chhHHH------HHHHHhCCCceeEEecc--CccccCHHHHHHHHHh
Confidence 7665 21 11 1 4666664 444332 45567887777666542 2679999999999998
Q ss_pred cCCc--EEE-EcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhh-ccccCC--CC--CcccEEEecCCccCCCCCe
Q 018318 180 FRPK--LII-CGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVA-AQEAAN--PF--EYCHIVTTTTHKSLRGPRA 251 (358)
Q Consensus 180 ~~~~--~v~-~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~-~~~~~~--~~--~~~d~~~~s~~K~l~g~~g 251 (358)
+... +|. ++++.+|.+.|+++|+++|+++|++++||+| +.|++. ...... .+ +++|.++.++||++..|.|
T Consensus 205 ~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA-~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~ 283 (460)
T COG0076 205 NTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAA-FGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIG 283 (460)
T ss_pred hccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEcc-ccceeecccCccchhhcCCCCceEEEECcccccCCCCC
Confidence 6655 442 4667788889999999999999999999998 445433 111111 22 3899999999999888876
Q ss_pred -eEEEEeCCCCCCCCCCCCCccccHHHHhhh--hcCC-------CCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 018318 252 -GMIFYRKGPKPPKKGQPEGAVYDFEDKINF--AVFP-------SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKAN 321 (358)
Q Consensus 252 -G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~ 321 (358)
|+++.+++. .+.+.+.. ...+ ...++......++..+.++.+..+++.+..++..++
T Consensus 284 ~G~il~rd~e-------------~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~ 350 (460)
T COG0076 284 CGVVLFRDEE-------------ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLEL 350 (460)
T ss_pred ceEEEEECHH-------------HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHH
Confidence 899988851 12221111 0001 112333333455667778887767889999999999
Q ss_pred HHHHHHHHhhCC-ceeeeCCCcceEEEEEc
Q 018318 322 AVALGNYLTGKG-YSLVTGGTENHLVLWDL 350 (358)
Q Consensus 322 ~~~l~~~L~~~G-~~~~~~~~~~~~~~v~~ 350 (358)
+++|++.|++.| |++..++ ..+++.+..
T Consensus 351 a~~la~~l~~~~~~e~~~~p-~l~~V~fr~ 379 (460)
T COG0076 351 ARYLAEELEKLGDFELVNEP-ELPIVAFRL 379 (460)
T ss_pred HHHHHHHHHhCCCcEeecCC-ccceEEEEc
Confidence 999999999997 9988633 444444443
No 90
>PRK07777 aminotransferase; Validated
Probab=99.85 E-value=4e-19 Score=169.53 Aligned_cols=303 Identities=16% Similarity=0.119 Sum_probs=184.7
Q ss_pred ccccccchHHHHHHHHHHHHhhcceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 018318 10 SSLETVDPEIHDLIEKEKRRQCRGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRAL 87 (358)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la 87 (358)
++++++++..+..+.+.+. ....+.|..+.. ..++.+.+++.+.+.... ..|+. .....++++.+.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~ 75 (387)
T PRK07777 4 SRLRPFGTTIFAEMSALAV-RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYPP------GPGIPELRAAIAAQRR 75 (387)
T ss_pred hhhhhcCccHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHH
Confidence 4556666666655555433 234566665432 235667777665553321 12322 1223456555666777
Q ss_pred HhcCCCCC-CCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC--
Q 018318 88 QTFHLDPT-QWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-- 164 (358)
Q Consensus 88 ~~~g~~~~-~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 164 (358)
+.+|.+.+ +. -.+++++|++|+..++.+++++||+|++..|.|+++.. .+...|..+. +++.+++
T Consensus 76 ~~~g~~~~~~~-~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~---------~~~~~g~~~~--~~~~~~~~~ 143 (387)
T PRK07777 76 RRYGLEYDPDT-EVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAA---------VIAMAGAHRV--PVPLVPDGR 143 (387)
T ss_pred HHhCCCCCCCC-cEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH---------HHHHCCCEEE--EeecCCccC
Confidence 77787531 10 12444455679999999999999999999988765421 2334565433 3444322
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC------C
Q 018318 165 TGYIDYDKLEEKALDFRPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF------E 233 (358)
Q Consensus 165 ~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~------~ 233 (358)
++.+|++++++++.+ ++++|++++++||+ . .++++|.++|++|++++|+|+++. ++.+.+....++ .
T Consensus 144 ~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~ 221 (387)
T PRK07777 144 GFALDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYE-HLVFDGARHLPLATLPGMR 221 (387)
T ss_pred CCcCCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccch-hcccCCCCcccHhhCCCCc
Confidence 456999999998864 68888888777762 2 358899999999999999999954 444322111111 1
Q ss_pred cccEEEecCCccCC--CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH
Q 018318 234 YCHIVTTTTHKSLR--GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF 311 (358)
Q Consensus 234 ~~d~~~~s~~K~l~--g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~ 311 (358)
+.++++.|++|.|+ |.+.|+++++++ +.+.+........... +.....++..++.. .....
T Consensus 222 ~~~i~~~S~SK~~g~~GlRiG~~~~~~~---------------l~~~~~~~~~~~~~~~-~~~~q~~~~~~l~~-~~~~~ 284 (387)
T PRK07777 222 ERTVTISSAAKTFNVTGWKIGWACGPAP---------------LIAAVRAAKQYLTYVG-GAPFQPAVAHALDH-EDAWV 284 (387)
T ss_pred CcEEEEeechhhccCcCceeEEEecCHH---------------HHHHHHHHHhhcccCC-CCHHHHHHHHHHhC-CcHHH
Confidence 35689999999874 667799988773 4444433211111111 11222222333322 12223
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 312 KAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 312 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
...++++.++++++.+.|.+.|+++.. +..++.+|+++.+
T Consensus 285 ~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~~ 324 (387)
T PRK07777 285 AALRDSLQAKRDRLAAGLAEAGFEVHD-SAGTYFLCADPRP 324 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccC-CCcceEEEecccc
Confidence 566778889999999999998988765 4578889988754
No 91
>PLN02822 serine palmitoyltransferase
Probab=99.85 E-value=1.4e-19 Score=176.39 Aligned_cols=262 Identities=16% Similarity=0.120 Sum_probs=174.1
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRY-YGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHD 122 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~-~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd 122 (358)
+|++.+++.+.+. .++.|+++++. ++..+...++| ++++++++.+. .+++++|..++..++.+++++||
T Consensus 125 ~~~i~ea~~~al~-~~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G~~a~~sai~a~~~~gd 194 (481)
T PLN02822 125 NEKIKESCTSALE-KYGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYGLSTIFSVIPAFCKKGD 194 (481)
T ss_pred CHHHHHHHHHHHH-HhCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHHHHhCCCCC
Confidence 7999999988875 45556666544 33334555666 88999999765 36677887788889999999999
Q ss_pred eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh--------cCC-cEEEEcCC--C
Q 018318 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD--------FRP-KLIICGGS--A 191 (358)
Q Consensus 123 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~--------~~~-~~v~~~~~--~ 191 (358)
.|++....|.+.. ..+.+.+. .+++++. .|.++++..+++ .++ ++|+++.. +
T Consensus 195 ~Ii~d~~~H~s~~---------~~~~ls~~--~~~~~~~------nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~ 257 (481)
T PLN02822 195 IIVADEGVHWGIQ---------NGLYLSRS--TIVYFKH------NDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQN 257 (481)
T ss_pred EEEEeCCccHHHH---------HHHHHcCC--eEEEECC------CCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCC
Confidence 9998876554332 12234443 3445543 245555555532 124 57777543 3
Q ss_pred CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccc--c--CCCC--CcccEEEecCCccCCCCCeeEEEEeCCCCCCCC
Q 018318 192 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQE--A--ANPF--EYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKK 265 (358)
Q Consensus 192 ~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~--~--~~~~--~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~ 265 (358)
.|.+.|+++|.++|++||+++++|++|+.|..+... . ...+ ...|++++|++|++ |..||+++++++
T Consensus 258 ~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~GG~i~g~~~------ 330 (481)
T PLN02822 258 SGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATEGGFCTGSAR------ 330 (481)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhCCeEEEcCHH------
Confidence 567789999999999999999999999877653211 0 0112 26789999999998 467799988773
Q ss_pred CCCCCccccHHHHhhhhcCCCCcCCCC-hhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcc
Q 018318 266 GQPEGAVYDFEDKINFAVFPSLQGGPH-NHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTEN 343 (358)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~ 343 (358)
+.+.+......++.++.. ....++..++++.+. ...+..+++++++++|++.|++. |+++.. +..+
T Consensus 331 ---------ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~~s 398 (481)
T PLN02822 331 ---------VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE--DNPSVLAKLKENIALLHKGLSDIPGLSIGS-NTLS 398 (481)
T ss_pred ---------HHHHHHhcCCceeeccccCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCC
Confidence 444444322222233222 222233334665432 23567888999999999999986 888754 4578
Q ss_pred eEEEEEcC
Q 018318 344 HLVLWDLR 351 (358)
Q Consensus 344 ~~~~v~~~ 351 (358)
+.+++.+.
T Consensus 399 pi~~l~l~ 406 (481)
T PLN02822 399 PIVFLHLE 406 (481)
T ss_pred CEEEEEeC
Confidence 88888875
No 92
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.85 E-value=9.5e-19 Score=166.72 Aligned_cols=282 Identities=16% Similarity=0.059 Sum_probs=176.1
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC-hH
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SP 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG-t~ 108 (358)
..+.+..++.. +++.+.+++.+.+.......|+.. .| ..++.+.+.+++++.+|.+.+.- ..|++++| ++
T Consensus 30 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~G---~~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G~~~ 102 (383)
T TIGR03540 30 DVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSY---EG---MLAYRQAVADWYKRRFGVELDPE-TEVLSLIGSKE 102 (383)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC---CC---CHHHHHHHHHHHHHhhCCCCCCC-CeEEECCCcHH
Confidence 45666665443 478888888765532211223221 12 23455555577776667642100 13555666 56
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhcCCcEEEE
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
++..++.+++++||.|++..|+|..+.. .....|..+. .++.+.+ ++.+|++++++++.+ ++++|++
T Consensus 103 ~l~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~G~~v~--~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i 170 (383)
T TIGR03540 103 GIAHIPLAFVNPGDIVLVPDPGYPVYRI---------GTLFAGGEPY--EMPLKEENGFLPDFDAIPEDIAK-KAKLMFI 170 (383)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCcchHH---------HHHhcCCEEE--EEecCcccCCccCHHHHHhhccc-cceEEEE
Confidence 9999999999999999999998875431 2345665544 4444433 356899999998864 7899988
Q ss_pred cCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCC---CC---cccEEEecCCccC--CCCCeeEE
Q 018318 188 GGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FE---YCHIVTTTTHKSL--RGPRAGMI 254 (358)
Q Consensus 188 ~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~---~~---~~d~~~~s~~K~l--~g~~gG~i 254 (358)
++++|| ...+ +++|.++|++||+++|+|+++. .+.+.+....+ +. ...+.+.|++|.| +|.|.|++
T Consensus 171 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~ 249 (383)
T TIGR03540 171 NYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYS-EITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMA 249 (383)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchh-hhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEE
Confidence 888887 3444 7899999999999999999964 33332211111 11 2347789999987 46677999
Q ss_pred EEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCc
Q 018318 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (358)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~ 334 (358)
++++ ++.+.+....... ..+++.....+...++... ....+...+++.++++.+.+.|++.|+
T Consensus 250 i~~~---------------~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~ 312 (383)
T TIGR03540 250 VGNA---------------DLIAGLGKVKTNV-DSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGI 312 (383)
T ss_pred eCCH---------------HHHHHHHHHHHhc-ccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8876 3444444322111 1122222233333333321 122356677788899999999999998
Q ss_pred eeeeCCCcceEEEEEcC
Q 018318 335 SLVTGGTENHLVLWDLR 351 (358)
Q Consensus 335 ~~~~~~~~~~~~~v~~~ 351 (358)
++.. +..+..+|+.+.
T Consensus 313 ~~~~-~~~~~~~~~~l~ 328 (383)
T TIGR03540 313 DVEK-PKATFYVWVPVP 328 (383)
T ss_pred EecC-CCcceEEEEECC
Confidence 8765 456778999875
No 93
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.85 E-value=3.3e-19 Score=170.69 Aligned_cols=253 Identities=15% Similarity=0.095 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccccccCChH-HHHHHHHhhcCC--CCeEEEecCCCCccccccccccCCccccccc--
Q 018318 77 EIENLCRSRALQTFHLDPTQWGVNVQPYSGSP-ANFAAYTAVLEP--HDRIMGLDLPSGGHLTHGYYTSGGKKISATS-- 151 (358)
Q Consensus 77 ~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~-a~~~~l~a~~~~--gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g-- 151 (358)
++.+.+++++++++|++.++ + +++.+|+. ++..++.+++.+ ||+|+++.+.|+++... +...+
T Consensus 64 ~~~~~~~~~la~~~g~~~~~--v-~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~---------~~~~~~~ 131 (398)
T cd00613 64 QALFELQTMLCELTGMDVAN--A-SLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAV---------ARTRGEP 131 (398)
T ss_pred HHHHHHHHHHHHHHCCCccc--e-eccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHH---------HHHhccc
Confidence 45556779999999987532 2 33455554 445555555666 99999999988875421 22222
Q ss_pred --ceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC-CCCccc-hHHHHHHHHHhCCEEEEechhhhhhhhccc
Q 018318 152 --IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA-YPRDWD-YARFRAVADKCGALLLCDMAHISGLVAAQE 227 (358)
Q Consensus 152 --~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~-~~~~~~-l~~i~~la~~~g~~lvvD~a~~~g~~~~~~ 227 (358)
.. ++.++.+ +++.+|++++++++.+ ++++|++++++ +|...| +++|+++|++||+++|+|++|+.|...
T Consensus 132 ~g~~--~~~v~~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~--- 204 (398)
T cd00613 132 LGIE--VVEVPSD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGL--- 204 (398)
T ss_pred CCcE--EEEeccC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCC---
Confidence 43 3444443 2467999999999865 68888776554 345567 499999999999999999998755421
Q ss_pred cCCCC-C-cccEEEecCCccC-----CCCCeeEEEEeCCCCCC-CCC--CCC-----Ccccc--HHHHhhhhcC----CC
Q 018318 228 AANPF-E-YCHIVTTTTHKSL-----RGPRAGMIFYRKGPKPP-KKG--QPE-----GAVYD--FEDKINFAVF----PS 286 (358)
Q Consensus 228 ~~~~~-~-~~d~~~~s~~K~l-----~g~~gG~i~~~~~~~~~-~~~--~~~-----~~~~~--~~~~~~~~~~----~~ 286 (358)
... . ++|++++|+|||+ +||++|+++.++++.+. ... +.. ...+. +..+.....+ +.
T Consensus 205 --~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~ 282 (398)
T cd00613 205 --KPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSN 282 (398)
T ss_pred --CChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccc
Confidence 111 2 7899999999997 24667899887754321 100 000 00000 0000000000 11
Q ss_pred CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 287 LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 287 ~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
+.+ .......+.++++..+...+++++.+++.++++++++.|++.+..........+.+++.+.
T Consensus 283 ~~~-~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~ 346 (398)
T cd00613 283 ICT-GQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLP 346 (398)
T ss_pred cee-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcC
Confidence 111 1111222223444444445667888999999999999999986543211122344566654
No 94
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=7.1e-20 Score=174.13 Aligned_cols=216 Identities=21% Similarity=0.226 Sum_probs=151.6
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCccccccc
Q 018318 72 NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (358)
Q Consensus 72 ~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g 151 (358)
.+....|| +++++++|.+.. +.++||+.|+..++.+++++||+|+++.+.|++.+.... ......|
T Consensus 60 ~p~~~~Le----~~lA~~~g~~~~-----i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~-----~~~~~~g 125 (388)
T PRK07811 60 NPTRTALE----EQLAALEGGAYG-----RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLID-----KVFTRWG 125 (388)
T ss_pred CccHHHHH----HHHHHHhCCCce-----EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHH-----HhCcCCC
Confidence 35566777 789999999872 667899999999999999999999999988875432110 0111123
Q ss_pred ceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccC
Q 018318 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~ 229 (358)
+ ++..++ ..|++++++++.+ ++++|+++.++|+ ...|+++|.++|+++|+++|+|++++.+...
T Consensus 126 i--~~~~~d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~----- 191 (388)
T PRK07811 126 V--EYTPVD------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQ----- 191 (388)
T ss_pred e--EEEEeC------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence 3 334332 3589999999875 7899998888776 4679999999999999999999998765431
Q ss_pred CCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHH
Q 018318 230 NPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 305 (358)
Q Consensus 230 ~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~ 305 (358)
.++. ++|++++|++|+++|+. ||+++++++ ++.+++...... .+... ....+ +.+++.
T Consensus 192 ~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~--------------~l~~~~~~~~~~--~g~~~-s~~~a-~l~~~~ 253 (388)
T PRK07811 192 QPLALGADVVVHSTTKYIGGHSDVVGGALVTNDE--------------ELDEAFAFLQNG--AGAVP-GPFDA-YLTLRG 253 (388)
T ss_pred CchhhCCcEEEecCceeecCCCCcEEEEEEECCH--------------HHHHHHHHHHHh--cCCCC-CHHHH-HHHHhc
Confidence 3444 89999999999998763 788888764 444444322111 11111 11111 233333
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHhhC-Cce
Q 018318 306 ASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (358)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~ 335 (358)
+ +.+..++++..+|++.+.++|+++ +++
T Consensus 254 L--~tl~~R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 254 L--KTLAVRMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred c--CcHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 3 246778888999999999999987 453
No 95
>PRK09082 methionine aminotransferase; Validated
Probab=99.85 E-value=1.5e-19 Score=172.29 Aligned_cols=304 Identities=15% Similarity=0.122 Sum_probs=188.9
Q ss_pred cccccccchHHHHHHHHHHHHhhcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRA 86 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~l 86 (358)
+++++++...++..+...+. ....+.+..+... .++.+.+++.+.+.... .+|+.. .....+++.+.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~------~G~~~lr~~~a~~l 80 (386)
T PRK09082 9 QSKLPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPPM------TGVAALREAIAAKT 80 (386)
T ss_pred hhHhhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCCC------CCcHHHHHHHHHHH
Confidence 44555555555554443322 2334666655432 36888888876653221 223221 22234555666888
Q ss_pred HHhcCCCCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCC
Q 018318 87 LQTFHLDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSST 165 (358)
Q Consensus 87 a~~~g~~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 165 (358)
.+++|.+.+.- ..+.+++| ++|+..++.++++|||+|++..|.|.++.. .++..|+. +++++.+.++
T Consensus 81 ~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~---------~~~~~g~~--~~~~~~~~~~ 148 (386)
T PRK09082 81 ARLYGRQYDAD-SEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP---------AIELAGGR--AVRVALQPPD 148 (386)
T ss_pred HHHhCCCCCCC-CcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH---------HHHHcCCE--EEEEecCccc
Confidence 88888753110 12445555 679999999999999999999998875431 23445654 4455554346
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCC-----ccchHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCCC--C---c
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSAYPR-----DWDYARFRAVADKCGALLLCDMAHISGLVAAQE-AANPF--E---Y 234 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~~~~-----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~~--~---~ 234 (358)
+.+|++++++++++ ++++|++++++||+ ..++++|.++|++||+++|+|+++. .+.+.+. ..... . .
T Consensus 149 ~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~-~~~~~~~~~~s~~~~~~~~~ 226 (386)
T PRK09082 149 FRVDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYE-HIVFDGAGHASVLRHPELRE 226 (386)
T ss_pred ccCCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhh-hhccCCCCCCChhhCcCccC
Confidence 78999999999865 68888887777763 2468899999999999999999964 3333221 11111 1 2
Q ss_pred ccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHH
Q 018318 235 CHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (358)
Q Consensus 235 ~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~ 312 (358)
..+++.|++|.+ +|.|.|++++++ ++.+.+.........+ .+.....++...+.. .....+
T Consensus 227 ~~i~~~S~SK~~~~~G~RiG~iv~~~---------------~l~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~-~~~~~~ 289 (386)
T PRK09082 227 RAFVVSSFGKTYHVTGWKVGYCVAPA---------------ALSAEFRKVHQYNTFT-VNTPAQLALADYLRA-EPEHYL 289 (386)
T ss_pred cEEEEeechhhccchhhhhhhhhCCH---------------HHHHHHHHHHhhhcCC-CChHHHHHHHHHHhC-ChHHHH
Confidence 348889999987 466789999876 3444443322111111 222222222222221 122345
Q ss_pred HHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 313 AYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 313 ~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
..++.+.++++++.+.|++.|+++.. +..++.+|+++..
T Consensus 290 ~~~~~~~~~~~~~~~~L~~~~~~~~~-~~g~~~~~~~~~~ 328 (386)
T PRK09082 290 ELPAFYQAKRDRFRAALANSRFKLLP-CEGTYFQLVDYSA 328 (386)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccC-CCeeEEEEEeccc
Confidence 66677888999999999998988765 4678889999863
No 96
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=4.1e-20 Score=176.86 Aligned_cols=222 Identities=13% Similarity=0.098 Sum_probs=152.2
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+...+|| +++++++|.+. .++++||+.|+..++.+++++||+|++..+.|+++.... ... ..+..
T Consensus 74 ~~Pt~~~LE----~~lA~l~g~~~-----~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~--~~~--~~~~~ 140 (418)
T PLN02242 74 FNPTVLNLG----RQMAALEGTEA-----AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALL--AHF--LPRKC 140 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHH--HHh--hhhcc
Confidence 457777888 78999999986 366889999999999999999999999988776543110 000 01123
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|. .+.+++ ..|+++++++++++++++|++++++|| .+.|+++|.++|++||+++|+|++|+. +..
T Consensus 141 G~--~~~~~d------~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~-~~~---- 207 (418)
T PLN02242 141 NI--TTTFVD------ITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAP-MVL---- 207 (418)
T ss_pred Cc--eEEEcC------CCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCc-cCC----
Confidence 43 333332 248999999987545899998888776 467999999999999999999999753 221
Q ss_pred CCCCC-cccEEEecCCccCCCC--C-eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCC--CCcCCCChhHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGP--R-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFP--SLQGGPHNHQIGALAVA 302 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~--~-gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~al~~a 302 (358)
.+.. ++|++++|++|+++|+ . ||+++++++ +.+.+...... ...+.+.....++ ..
T Consensus 208 -~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~---------------li~~l~~~~~~~~~~~g~~~~~~~A~--l~ 269 (418)
T PLN02242 208 -SPARLGADVVVHSISKFISGGADIIAGAVCGPAE---------------LVNSMMDLHHGALMLLGPTMNPKVAF--EL 269 (418)
T ss_pred -CHHHcCCcEEEEeCccccCCCCCceEEEEEcCHH---------------HHHHHHHHhhhhhhccCCCCCHHHHH--HH
Confidence 2223 7899999999998654 2 688887763 43333322110 1122222222222 11
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 303 LKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
++.+ ..+..+++++.++++++.++|++++++++-
T Consensus 270 ~~~l--~tl~~r~~~~~~~a~~la~~L~~~~~~V~y 303 (418)
T PLN02242 270 SERL--PHLSLRMKEHCRRAMEYAKRMKELGLKVIY 303 (418)
T ss_pred HcCC--CcHHHHHHHHHHHHHHHHHHHHhCCCEEEC
Confidence 1221 235667889999999999999999988864
No 97
>PRK07337 aminotransferase; Validated
Probab=99.85 E-value=2.7e-19 Score=170.81 Aligned_cols=302 Identities=14% Similarity=0.091 Sum_probs=182.3
Q ss_pred cccccchHHHHHHHHHHHHh----hcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 018318 11 SLETVDPEIHDLIEKEKRRQ----CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRS 84 (358)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~----~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~ 84 (358)
++..+.++.+..+.+.+.+. ...+.|..+... +++.+.+++.+.+.... ..|+. ......+++.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~ 78 (388)
T PRK07337 6 RVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGV-TQYTS------ALGLAPLREAIAA 78 (388)
T ss_pred HhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHH
Confidence 34444444444443333322 244667666443 47788888877664321 12322 1223456555556
Q ss_pred HHHHhcCC--CCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc
Q 018318 85 RALQTFHL--DPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (358)
Q Consensus 85 ~la~~~g~--~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 161 (358)
++.+.+|+ +++ .|+.++| ++|+..++.+++++||+|+++.|+|.++.. .+...|+.+ +.++.
T Consensus 79 ~~~~~~~~~~~~~----~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g~~~--~~~~~ 143 (388)
T PRK07337 79 WYARRFGLDVAPE----RIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRH---------FVAAAEGRP--VLVPS 143 (388)
T ss_pred HHHHHhCCCCChH----hEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH---------HHHHcCCEE--EEeec
Confidence 66666675 333 2444554 679999999999999999999998876431 223455544 44444
Q ss_pred CC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-c
Q 018318 162 NS-STGYIDYDKLEEKALDFRPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-Y 234 (358)
Q Consensus 162 ~~-~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~ 234 (358)
+. .++.+|++++++++.+ ++++|++++++||+ . .++++|+++|+++|+++++|+++ .++.+.+....... +
T Consensus 144 ~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~ 221 (388)
T PRK07337 144 GPAERFQLTAADVEAAWGE-RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIY-QGLSYDAAPVSALSLG 221 (388)
T ss_pred CCccCCcCCHHHHHhhcCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCcChhhcc
Confidence 42 2468999999998864 67888888888773 2 35789999999999999999984 34443322111112 3
Q ss_pred cc-EEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH
Q 018318 235 CH-IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF 311 (358)
Q Consensus 235 ~d-~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~ 311 (358)
.+ +++.|++|.+ +|.|.|+++++++ +.+.+.........+ .+.....++..++..-....+
T Consensus 222 ~~vi~~~S~SK~~~~~G~RiG~~~~~~~---------------l~~~l~~~~~~~~~~-~s~~~q~~~~~~l~~~~~~~~ 285 (388)
T PRK07337 222 DDVITINSFSKYFNMTGWRLGWLVVPEA---------------LVGTFEKLAQNLFIC-ASALAQHAALACFEPDTLAIY 285 (388)
T ss_pred CCEEEEEechhhcCCchhheeeeecCHH---------------HHHHHHHHHHHhccC-CChHHHHHHHHHhccCchHHH
Confidence 33 5678999987 4778899998773 444443322111111 122222222222321111224
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 312 KAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 312 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
.+.++++.++++++.+.|++.|+.+...+..+..+|+++..
T Consensus 286 ~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~ 326 (388)
T PRK07337 286 ERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRG 326 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEeccc
Confidence 55567788888999999999887653234678889999864
No 98
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.85 E-value=3.6e-20 Score=176.58 Aligned_cols=223 Identities=22% Similarity=0.236 Sum_probs=153.1
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++...+| +.+....|| +++++++|+++. +.+++|+.|+..++.++++|||+|+++.+.|++..... .
T Consensus 56 ~~~y~r~--~~p~~~~Le----~~lA~l~G~~~~-----~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~--~ 122 (398)
T PRK07504 56 GFIYSRY--SNPTVDMFE----KRMCALEGAEDA-----RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVV--E 122 (398)
T ss_pred CceeecC--CCchHHHHH----HHHHHHhCCCee-----eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHH--H
Confidence 4444443 345667787 789999999873 45789999998888888999999999998887643211 0
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
......|. ++..++ .+|++++++++.+ ++++|++++++|+ ...|+++|.++|+++|+++++|++|+
T Consensus 123 ---~~~~~~G~--~v~~vd------~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a 190 (398)
T PRK07504 123 ---TLLPRYGI--ESTLVD------GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFA 190 (398)
T ss_pred ---HHHhhcCe--EEEEEC------CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCcc
Confidence 01122343 344442 3789999999864 7899999888876 57799999999999999999999987
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.+... .+++ ++|++++|+||+++|+ .||+++++++ .+.+.+...... .|....+.
T Consensus 191 ~~~~~-----~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~--------------~i~~~~~~~~~~--~g~~~s~~ 249 (398)
T PRK07504 191 TPLFQ-----KPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA--------------WIEEHLQDYFRH--TGPSLSPF 249 (398)
T ss_pred ccccC-----CchhhCCCEEEeeccccccCCccceEEEEEeCcH--------------HHHHHHHHHHHH--hCCCCCHH
Confidence 66432 3344 8999999999999764 2578777664 222222211110 11111121
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cc
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GY 334 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~ 334 (358)
.+ +.+++.+ +.+..++++..+|++++.++|+++ ++
T Consensus 250 ~A--~~~l~~L--~tl~~R~~~~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 250 NA--WTLLKGL--ETLPVRVRQQTESAAAIADFLAGHPKV 285 (398)
T ss_pred HH--HHHHhcc--chHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 22 2333333 346788899999999999999987 45
No 99
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.85 E-value=3e-20 Score=176.71 Aligned_cols=224 Identities=19% Similarity=0.156 Sum_probs=152.2
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCcccccccccc
Q 018318 63 MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS 142 (358)
Q Consensus 63 ~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~ 142 (358)
+.++|+ +.+...+|| +.+++++|.+. .++++||+.|+..++.++++|||+|+++.+.|++.+... ..
T Consensus 53 ~~y~r~--~~pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~--~~ 119 (386)
T PRK06767 53 YIYSRL--GNPTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFL--EV 119 (386)
T ss_pred ccccCC--CCcchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHH--HH
Confidence 444443 456677888 78999999865 377899999999999999999999999998776543211 00
Q ss_pred CCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhh
Q 018318 143 GGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHIS 220 (358)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~ 220 (358)
.....|. ..... ...|++++++++.+ ++++|++++++|| ...|+++|.++|+++|+++++|++|+.
T Consensus 120 ---~~~~~gi--~~~~~------~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~ 187 (386)
T PRK06767 120 ---LEEKFMI--THSFC------DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCS 187 (386)
T ss_pred ---HHhhcCe--EEEEe------CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcc
Confidence 0011222 22222 13588999999865 7899999888776 467999999999999999999999865
Q ss_pred hhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHH
Q 018318 221 GLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (358)
Q Consensus 221 g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (358)
+... .++. ++|++++|++|+++|+. ||+++++++ .+.+...... ... ++...+..
T Consensus 188 ~~~~-----~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~--------------~i~~~~~~~~-~~~-g~~~~~~~ 246 (386)
T PRK06767 188 PYLQ-----RPLELGCDAVVHSATKYIGGHGDVVAGVTICKTR--------------ALAEKIRPMR-KDI-GGIMAPFD 246 (386)
T ss_pred cccC-----CchhcCCcEEEecCcceecCCCCceeEEEEeChH--------------HHHHHHHHHH-HHh-CCCCCHHH
Confidence 4332 3444 89999999999997754 789988874 2222111111 111 11111111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Ccee
Q 018318 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSL 336 (358)
Q Consensus 297 ~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~ 336 (358)
+ +.+++.+ ..+..++++.++++++++++|+++ +++.
T Consensus 247 a--~l~~~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~ 283 (386)
T PRK06767 247 A--WLLLRGL--KTLAVRMDRHCDNAEKIVSFLKNHDAVEG 283 (386)
T ss_pred H--HHHHcCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence 1 2223322 234677889999999999999987 7764
No 100
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.85 E-value=4.7e-20 Score=175.42 Aligned_cols=245 Identities=20% Similarity=0.202 Sum_probs=162.4
Q ss_pred ccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh
Q 018318 38 ASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV 117 (358)
Q Consensus 38 a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~ 117 (358)
.+.++..+.+.+++..+.... .++.++++ +.+..+++| +++++++|.+. .+.+++|++|+..++.++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~--~~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~v~~ssG~~Ai~~al~al 96 (390)
T PRK08133 30 LTSSFVFESAAEAAARFAGEE--PGNIYSRF--TNPTVTMFQ----ERLAALEGAEA-----CVATASGMAAILAVVMAL 96 (390)
T ss_pred CCCCcccCCHHHHHHhhcCCc--CCceeECC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHH
Confidence 445555566666654433221 24445544 345666776 78999999875 367889999999999999
Q ss_pred cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc
Q 018318 118 LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RD 195 (358)
Q Consensus 118 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~ 195 (358)
+++||+|++..+.|++.+.... ..+...|. ++++++. .|++++++++++ ++++|++++++|+ ..
T Consensus 97 ~~~Gd~Vi~~~~~y~~t~~~~~-----~~~~~~G~--~v~~vd~------~d~~~l~~~i~~-~tklV~ie~p~NptG~v 162 (390)
T PRK08133 97 LQAGDHVVSSRSLFGSTVSLFE-----KIFARFGI--ETTFVDL------TDLDAWRAAVRP-NTKLFFLETPSNPLTEL 162 (390)
T ss_pred hCCCCEEEEccCcchhHHHHHH-----HHHHHcCc--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCCc
Confidence 9999999999988876542110 01223454 4455542 378999999864 7899998877765 56
Q ss_pred cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCc
Q 018318 196 WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGA 271 (358)
Q Consensus 196 ~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~ 271 (358)
.|+++|.++|+++|+++++|++++.+... .++. ++|++++|++|+++|+ .||+++++++
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~~-----~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~------------ 225 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPALQ-----QPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKE------------ 225 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCCcEEEeecceeecCCcceEeEEEEcCHH------------
Confidence 79999999999999999999998655432 2344 8899999999998654 3578877663
Q ss_pred cccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cce
Q 018318 272 VYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (358)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~ 335 (358)
+.+.+...... .+. ...... .+.+++-+ +.+..+++++.+|+..+.++|+++ +++
T Consensus 226 ---~~~~~~~~~~~--~g~-~~~~~~-a~~~l~gl--~tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 226 ---LMEEVFGFLRT--AGP-TLSPFN-AWVFLKGL--ETLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred ---HHHHHHHHHHH--hCC-CCCHHH-HHHHHccc--chHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 22222211111 111 111111 12223322 246778888999999999999987 553
No 101
>PRK10534 L-threonine aldolase; Provisional
Probab=99.85 E-value=1.5e-19 Score=169.03 Aligned_cols=270 Identities=17% Similarity=0.167 Sum_probs=165.6
Q ss_pred eEeccCCC-CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHH
Q 018318 35 ELIASENF-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (358)
Q Consensus 35 ~l~a~~~~-~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~ 113 (358)
.+..++++ ++|.+++++........ + |...+...+|| +.+++++|+++ . +++.+|++++..+
T Consensus 3 ~~~~~~~~~p~~~~~~a~~~~~~~~~-------~-Y~~~~~~~~L~----~~la~~~g~~~----~-~v~~~g~~a~~~~ 65 (333)
T PRK10534 3 DLRSDTVTRPSRAMLEAMMAAPVGDD-------V-YGDDPTVNALQ----DYAAELSGKEA----A-LFLPTGTQANLVA 65 (333)
T ss_pred ccccccCCCCCHHHHHHHHhccCCCc-------c-cCCCHHHHHHH----HHHHHHhCCCe----E-EEeCchHHHHHHH
Confidence 34444443 68999999865432211 1 22234455676 77899999876 2 5678888888888
Q ss_pred HHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-----CCcEEEEc
Q 018318 114 YTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPKLIICG 188 (358)
Q Consensus 114 l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~-----~~~~v~~~ 188 (358)
+.+++.|||+|+++.+.|...+... .....+ ..+.++++++ +++.+|++++++++.++ ++++|+++
T Consensus 66 l~~~~~~gd~vi~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~ 136 (333)
T PRK10534 66 LLSHCERGEEYIVGQAAHNYLYEAG-------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred HHHhcCCCCeeEEechhhhhHhcCC-------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence 8888999999998776553211100 011222 1244455544 36789999999998643 57889888
Q ss_pred CCCCCCccch---HHHHHHHHHhCCEEEEechhhhhhhhc-cccCCCC-CcccEEEecCCccCCCCCeeEEEEeCCCCCC
Q 018318 189 GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAA-QEAANPF-EYCHIVTTTTHKSLRGPRAGMIFYRKGPKPP 263 (358)
Q Consensus 189 ~~~~~~~~~l---~~i~~la~~~g~~lvvD~a~~~g~~~~-~~~~~~~-~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~ 263 (358)
++++|...+. ++|.++|++||+++++|+|+..+.... +.....+ ...|.++.|+||.++.+.||++++++
T Consensus 137 np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~----- 211 (333)
T PRK10534 137 NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR----- 211 (333)
T ss_pred cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH-----
Confidence 8888866554 566778999999999999976432111 1000011 14576667899987655566777766
Q ss_pred CCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcc
Q 018318 264 KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTEN 343 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~ 343 (358)
++.+.+.....+. .++.+...+ +.++++..+. +..+++++..++++++.+.|++.|+++.. +.+
T Consensus 212 ----------~~i~~~~~~~~~~-~~~~~~~~~-~~a~~~~~l~--~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~ 275 (333)
T PRK10534 212 ----------DYIKRARRWRKMT-GGGMRQAGI-LAAAGLYALK--HNVARLQEDHDNAAWLAEQLREAGADVMR--QDT 275 (333)
T ss_pred ----------HHHHHHHHHHHHh-CCchhhHHH-HHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhCCCccCC--CCc
Confidence 3555554432221 111111111 1122222221 22345555667789999999999998875 357
Q ss_pred eEEEEEcC
Q 018318 344 HLVLWDLR 351 (358)
Q Consensus 344 ~~~~v~~~ 351 (358)
+.+|+++.
T Consensus 276 nfv~~~~~ 283 (333)
T PRK10534 276 NMLFVRVG 283 (333)
T ss_pred eEEEEECC
Confidence 78898875
No 102
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.85 E-value=7.7e-19 Score=167.72 Aligned_cols=312 Identities=17% Similarity=0.139 Sum_probs=185.3
Q ss_pred CCccchhhcccccccchHHHHHHHHHHHHhhcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHH
Q 018318 1 MDPVNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEI 78 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l 78 (358)
||-...| ++++.....+...-+.+........+.+..+... +++.+.+++.+.+.... ..|.. ......+
T Consensus 1 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~l 72 (391)
T PRK07309 1 MDLTKRF-NKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQ-SHYTG------MAGLLEL 72 (391)
T ss_pred CchhhHH-HhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHH
Confidence 4444445 4555554554444343322222344555554432 36777888776554221 12321 1223456
Q ss_pred HHHHHHHHHHhcCCCCCCCCccccccC-ChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEe
Q 018318 79 ENLCRSRALQTFHLDPTQWGVNVQPYS-GSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (358)
Q Consensus 79 e~~~~~~la~~~g~~~~~~~~~v~~~s-Gt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 157 (358)
++.+++++.+.+|...... ..|++++ +++|+..++.+++++||+|++.+|.|.++.. .++..|.+ ++
T Consensus 73 r~~ia~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~---------~~~~~g~~--~~ 140 (391)
T PRK07309 73 RQAAADFVKEKYNLDYAPE-NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEP---------IVNLVGAE--IV 140 (391)
T ss_pred HHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH---------HHHHcCCE--EE
Confidence 6566666666666532100 1244455 4679999999999999999999988876431 23455654 44
Q ss_pred ecccCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCC
Q 018318 158 PYKVNSSTGYIDYDKLEEKALDF--RPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (358)
Q Consensus 158 ~~~~~~~~~~id~~~l~~~l~~~--~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~ 230 (358)
.++.+..++.+|++++++++++. ++++|++++++||+ .. ++++|.++|++||+++|+|+++. .+.+.+....
T Consensus 141 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~-~~~~~~~~~~ 219 (391)
T PRK07309 141 EIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYS-ELTYTGEPHV 219 (391)
T ss_pred EEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEcccc-ceeeCCCCCC
Confidence 45544334579999999998642 47888888777763 33 58899999999999999999954 4443221111
Q ss_pred CCC----cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 231 PFE----YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 231 ~~~----~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
++. .--+++.|++|.+ +|.+.|+++++++ +.+.+.... .....+++.....++..++.
T Consensus 220 ~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~---------------~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 283 (391)
T PRK07309 220 SIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAE---------------FTAQLIKSH-QYLVTAATTMAQFAAVEALT 283 (391)
T ss_pred CHHHhccCCEEEEecChhhccCccceeEEEEeCHH---------------HHHHHHHHH-hhcccCCChHHHHHHHHHHh
Confidence 221 2237889999986 5677899998874 444444321 11111222222333333332
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
.. ........+++.++++++.+.|++.|+++.. +..+..+|+.+.
T Consensus 284 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-p~gg~~~~~~l~ 328 (391)
T PRK07309 284 NG-KDDALPMKKEYIKRRDYIIEKMTDLGFKIIK-PDGAFYIFAKIP 328 (391)
T ss_pred CC-hhHHHHHHHHHHHHHHHHHHHHHHCCCeecC-CCeeEEEEEECC
Confidence 21 1112344566778888999999998988765 456777888764
No 103
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.85 E-value=5.5e-20 Score=175.64 Aligned_cols=216 Identities=19% Similarity=0.205 Sum_probs=149.4
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+....|| +.+++++|++. .+.++||+.|+..++.++++|||+|++..+.|++.+... . ..+...
T Consensus 63 ~~p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~--~---~~~~~~ 128 (403)
T PRK07503 63 SNPTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL--H---HGLGEF 128 (403)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH--H---HHHhhC
Confidence 345677787 78999999876 377889999999999888999999999988776533110 0 012234
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+ ++.+++. .|++++++++++ ++++|++++++|+ ...|+++|.++|+++|+++++|++|+.+..
T Consensus 129 G~--~v~~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~----- 194 (403)
T PRK07503 129 GV--TVRHVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL----- 194 (403)
T ss_pred CE--EEEEeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 43 4444432 378999999875 7899998877765 567999999999999999999999876532
Q ss_pred CCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
..++. ++|++++|++|+++|+ +||+++.++ ++.++++........+....+.-+ +.+++
T Consensus 195 ~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~---------------~l~~~l~~~~~~~~~g~~~s~~~a--~l~l~ 257 (403)
T PRK07503 195 QRPLELGADLVVHSATKYLGGHGDITAGLVVGGK---------------ALADRIRLEGLKDMTGAVMSPFDA--FLLMR 257 (403)
T ss_pred CCchhhCCCEEEccccccccCCCceeEEEEEcCH---------------HHHHHHHhhhHHhCcCCCCCHHHH--HHHHc
Confidence 13344 8899999999999764 378887554 344444321111111222222222 22333
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
.+ +.+..+++++.+|++++.++|+++.
T Consensus 258 ~L--~tl~~r~~~~~~na~~~a~~L~~~p 284 (403)
T PRK07503 258 GL--KTLALRMDRHCASAQAVAEWLARHP 284 (403)
T ss_pred Cc--chHHHHHHHHHHHHHHHHHHHHhCC
Confidence 32 3467788888999999999999873
No 104
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.85 E-value=1.8e-20 Score=175.82 Aligned_cols=230 Identities=19% Similarity=0.193 Sum_probs=155.3
Q ss_pred HHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
+.+.+|++||++.. .+.++|| .+|.+++.++++|||+|++...+|.+.+. .+.+.|+....+...
T Consensus 71 Ae~~aA~~fGAd~t-----~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~---------alil~ga~Pvyi~p~ 136 (417)
T PF01276_consen 71 AEELAARAFGADKT-----FFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYN---------ALILSGAIPVYIPPE 136 (417)
T ss_dssp HHHHHHHHHTESEE-----EEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHH---------HHHHHTEEEEEEEEE
T ss_pred HHHHHHHhcCCCeE-----EEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHH---------HHHHcCCeEEEecCC
Confidence 44889999999973 4567776 59999999999999999999998887652 234566544333322
Q ss_pred cCCCC---CCCCH-----HHHHHHHhhcC-Cc---EEEEcCC-CCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccc
Q 018318 161 VNSST---GYIDY-----DKLEEKALDFR-PK---LIICGGS-AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQE 227 (358)
Q Consensus 161 ~~~~~---~~id~-----~~l~~~l~~~~-~~---~v~~~~~-~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~ 227 (358)
+++. +.+++ +.++++++++. .+ +|++..| ..|...|+++|+++|++++++|+||+||+..+.+.+.
T Consensus 137 -~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~l 215 (417)
T PF01276_consen 137 -DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPL 215 (417)
T ss_dssp -E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGG
T ss_pred -ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCC
Confidence 2222 24677 99999998753 23 3666555 4678889999999999999999999999876655422
Q ss_pred cCCCCC-ccc-------EEEecCCccCCCC-CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHH
Q 018318 228 AANPFE-YCH-------IVTTTTHKSLRGP-RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGA 298 (358)
Q Consensus 228 ~~~~~~-~~d-------~~~~s~~K~l~g~-~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 298 (358)
....+. ++| +++.|.||++++. +++++..++.. .+ -.++++....-...++|++..+++
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~--------~v----~~~~~~~~l~~~~TTSPSY~lmAS 283 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDR--------IV----DHERVNEALSMHQTTSPSYPLMAS 283 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCC--------CT----THHHHHHHHHHHS-SS--HHHHHH
T ss_pred ccchhhccCccccccceeeeechhhcccccccceEEEecCCC--------cc----cHHHHHHHHHHHcCCChHHHHHHH
Confidence 223334 889 9999999999876 45788887751 01 123333322222346789999999
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh---hC-Cceeee
Q 018318 299 LAVALKQASTPAFKAYAKQVKANAVALGNYLT---GK-GYSLVT 338 (358)
Q Consensus 299 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~---~~-G~~~~~ 338 (358)
+-.|.+.+...+.++..++..++++.+|+.++ +. +|+++.
T Consensus 284 lD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~ 327 (417)
T PF01276_consen 284 LDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLG 327 (417)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCC
Confidence 99988887334567788888999999999994 33 677764
No 105
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=5.2e-20 Score=175.59 Aligned_cols=222 Identities=18% Similarity=0.201 Sum_probs=154.5
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCcccccccccc
Q 018318 63 MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS 142 (358)
Q Consensus 63 ~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~ 142 (358)
+.++++ +.+....|| +++++++|.+. .+.++||+.|+..++.+++++||+|++....|++.+... .
T Consensus 62 ~~Y~r~--~~p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~--~- 127 (403)
T PRK07810 62 FVYSRY--GNPTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVC--N- 127 (403)
T ss_pred cceeCC--CCchHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHH--H-
Confidence 334443 456677888 78999999875 477899999999999999999999999887766543211 0
Q ss_pred CCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhh
Q 018318 143 GGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHIS 220 (358)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~ 220 (358)
..+...|+ ++..++ ..|++++++++++ ++++|++++++|+ ...|+++|+++||++|+++++|++|+.
T Consensus 128 --~~~~~~G~--~v~~vd------~~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~ 196 (403)
T PRK07810 128 --EILPRWGV--ETVFVD------GEDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFAT 196 (403)
T ss_pred --HHHHHcCc--EEEEEC------CCCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCc
Confidence 11223454 444443 2489999999875 7899998887766 567999999999999999999999886
Q ss_pred hhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHH
Q 018318 221 GLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (358)
Q Consensus 221 g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (358)
+... .++. ++|++++|++|+++|.. ||+++++++ .+...+..... . .|....+..
T Consensus 197 ~~~~-----~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~--------------~~~~~l~~~~~-~-~g~~~s~~~ 255 (403)
T PRK07810 197 PLLQ-----RGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE--------------YIDGPVQKLMR-H-TGPALSAFN 255 (403)
T ss_pred cccC-----ChhhcCCcEEEccCCceecCCcCceeEEEEeChH--------------HHHHHHHHHHH-H-hCCCCCHHH
Confidence 6432 2344 89999999999997643 688888774 22222322111 1 111222222
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cc
Q 018318 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GY 334 (358)
Q Consensus 297 ~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~ 334 (358)
+ +.+++.+ +.+..++++..+++.++.++|+++ ++
T Consensus 256 a--~l~l~~L--~tl~~R~~~~~~~a~~~a~~L~~~p~v 290 (403)
T PRK07810 256 A--WVLLKGL--ETLALRVRHSNASALRIAEFLEGHPAV 290 (403)
T ss_pred H--HHHHhcc--CcHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 2 2233333 346788999999999999999987 44
No 106
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=5.6e-20 Score=173.72 Aligned_cols=215 Identities=14% Similarity=0.103 Sum_probs=148.3
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCccccc
Q 018318 70 GGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISA 149 (358)
Q Consensus 70 ~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (358)
.|++....|| ++++++.|.+. .++++||+.|+..++.++++|||+|+++++.|++..... . ..+..
T Consensus 47 ~gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~--~---~~~~~ 112 (377)
T TIGR01324 47 RGTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFC--D---IVLKR 112 (377)
T ss_pred CCCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH--H---HHHHh
Confidence 3667788888 78999999875 366889999999999999999999999988775432100 0 01122
Q ss_pred ccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccc
Q 018318 150 TSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQE 227 (358)
Q Consensus 150 ~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~ 227 (358)
.|. ++..++. .+.+++++++++ ++|+|++++++|+ ...|+++|+++|+++|+++++|++|+.|...
T Consensus 113 ~gi--~v~~~d~------~~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~--- 180 (377)
T TIGR01324 113 MGV--DITYYDP------LIGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF--- 180 (377)
T ss_pred cCc--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc---
Confidence 343 3333321 123788888865 7899998877766 5679999999999999999999999988653
Q ss_pred cCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHH
Q 018318 228 AANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVAL 303 (358)
Q Consensus 228 ~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al 303 (358)
.+++ ++|++++|++|+++|+. ||+++++++ ..+.+..... ..|....+ .. ....+
T Consensus 181 --~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~---------------~~~~l~~~~~--~~G~~l~p-~~-a~~~~ 239 (377)
T TIGR01324 181 --KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANAR---------------TWDQLREHSY--LMGQMVDA-DD-AYTTL 239 (377)
T ss_pred --CccccCceEEEecCceeccCCCCceEEEEEeCHH---------------HHHHHHHHHH--HhCCCCCH-HH-HHHHH
Confidence 3455 89999999999998763 587777663 3233322111 11221112 11 12233
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 304 KQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
+-+ +.+..+++++++|+..+.++|+++.
T Consensus 240 rgl--~tl~~R~~~~~~~a~~la~~L~~~p 267 (377)
T TIGR01324 240 RGL--RTLGVRLKQHQESSLAIAKWLSEQP 267 (377)
T ss_pred hhh--hhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 332 2356779999999999999999873
No 107
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.4e-18 Score=166.51 Aligned_cols=277 Identities=14% Similarity=0.077 Sum_probs=176.6
Q ss_pred ceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC---CCCCCccccccCCh
Q 018318 33 GIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD---PTQWGVNVQPYSGS 107 (358)
Q Consensus 33 ~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~---~~~~~~~v~~~sGt 107 (358)
.+.|..+++. +++.+.+++.+.+......+|+. .| ...|.+.+.+++.+.+|.. +++ .|++++|+
T Consensus 46 ~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G---~~~lr~aia~~~~~~~g~~~~~~~~---~I~it~Gs 115 (410)
T PRK06290 46 LIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NG---IQEFKEAAARYMEKVFGVKDIDPVT---EVIHSIGS 115 (410)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CC---cHHHHHHHHHHHHHHcCCCcCCCcc---eEEEccCH
Confidence 4677766543 47788888776543211112331 12 2355555667777666754 321 36677776
Q ss_pred -HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhcCCcEE
Q 018318 108 -PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLI 185 (358)
Q Consensus 108 -~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v 185 (358)
+++..++.+++++||.|+++.|.|..+.. .++..|+++ +.++.+.+ ++.+|++++++++.+ ++++|
T Consensus 116 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g~~v--~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i 183 (410)
T PRK06290 116 KPALAMLPSCFINPGDVTLMTVPGYPVTGT---------HTKYYGGEV--YNLPLLEENNFLPDLDSIPKDIKE-KAKLL 183 (410)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCCccHHH---------HHHHcCCEE--EEEecCCCcCCcCCHHHHHHhhcc-cceEE
Confidence 58888999999999999999998765431 234456544 44444433 467899999998864 78999
Q ss_pred EEcCCCCCC--ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCC--CCC---cccEEEecCCccC--CCCCeeE
Q 018318 186 ICGGSAYPR--DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE---YCHIVTTTTHKSL--RGPRAGM 253 (358)
Q Consensus 186 ~~~~~~~~~--~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~--~~~---~~d~~~~s~~K~l--~g~~gG~ 253 (358)
++++|+||+ ..+ +++|.++|++||++||+|+++. .+.+.+.... .+. ..++++.|++|.+ +|.|.|+
T Consensus 184 ~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~-~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ 262 (410)
T PRK06290 184 YLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA-ALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAF 262 (410)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchh-hceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEe
Confidence 988888873 344 6788899999999999999964 4333221111 111 3468999999987 5677899
Q ss_pred EEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhC
Q 018318 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+++++ ++.+.+.........+ .+.....+...++. ..+ .+...+++.++++++.+.|++.
T Consensus 263 ii~~~---------------~l~~~l~~~~~~~~~~-~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (410)
T PRK06290 263 VVGNE---------------LIVKAFATVKDNNDSG-QFIAIQKAGIYALD---HPEITEKIREKYSRRLDKLVKILNEV 323 (410)
T ss_pred EEeCH---------------HHHHHHHHHHhccccC-CcHHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99877 3444444332222111 11122222222222 223 3566777888899999999999
Q ss_pred CceeeeCCCcceEEEEEcCC
Q 018318 333 GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 333 G~~~~~~~~~~~~~~v~~~~ 352 (358)
|+.+.. +..+..+|+.+.+
T Consensus 324 g~~~~~-p~g~f~l~v~lp~ 342 (410)
T PRK06290 324 GFKAEM-PGGTFYLYVKAPK 342 (410)
T ss_pred CCeecC-CCeeeEEEEECCC
Confidence 988765 4567888988753
No 108
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=1.9e-19 Score=173.27 Aligned_cols=163 Identities=21% Similarity=0.250 Sum_probs=123.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh---------cCCCCeEEEecCCCCccccccccccC
Q 018318 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV---------LEPHDRIMGLDLPSGGHLTHGYYTSG 143 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~---------~~~gd~Vl~~~~~~~~~~~~~~~~~~ 143 (358)
+...+|| +.+++++|++. .++++||++|+..++.++ ++|||+|+++.++|.+...
T Consensus 63 ~~~~~fe----~~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~------- 126 (438)
T PRK15407 63 RFNDAFE----KKLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN------- 126 (438)
T ss_pred hhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH-------
Confidence 3456777 77999999875 366788999999988765 4899999999988765431
Q ss_pred CcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhh
Q 018318 144 GKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLV 223 (358)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~ 223 (358)
.+...|. .+++++++.+++.+|++++++++.+ ++++|+++++ ++.+.++++|.++|++||++||+|++|+.|..
T Consensus 127 --~v~~~G~--~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~ 200 (438)
T PRK15407 127 --PIIQNGL--VPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGST 200 (438)
T ss_pred --HHHHcCC--EEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhh
Confidence 2334554 4566666545788999999999864 7888887754 56678999999999999999999999999987
Q ss_pred hccccCCCCCcccEEEecCC--ccCCCCCeeEEEEeCC
Q 018318 224 AAQEAANPFEYCHIVTTTTH--KSLRGPRAGMIFYRKG 259 (358)
Q Consensus 224 ~~~~~~~~~~~~d~~~~s~~--K~l~g~~gG~i~~~~~ 259 (358)
+.+..... ..|+.++|++ |.+.+..||+++++++
T Consensus 201 ~~g~~~G~--~gd~~~fSf~~~k~~~~geGG~l~t~d~ 236 (438)
T PRK15407 201 YDGRMTGT--FGDIATLSFYPAHHITMGEGGAVFTNDP 236 (438)
T ss_pred cCCeeeec--cCceEEEeCCCCCCccccCceEEEECCH
Confidence 65532222 2377777665 7676667899999885
No 109
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.84 E-value=3.6e-19 Score=170.02 Aligned_cols=285 Identities=15% Similarity=0.113 Sum_probs=173.7
Q ss_pred hcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCC--CCCCCCccccccCC
Q 018318 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL--DPTQWGVNVQPYSG 106 (358)
Q Consensus 31 ~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~--~~~~~~~~v~~~sG 106 (358)
...+.|..++.. +++.+.+++...+.... .+|.. ......+++.+.+++.+.+|. ++++ .++++++
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~~---i~~t~G~ 102 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGW-THYTP------NAGIPELREAIAEYYKKFYGVDVDVDN---VIVTAGA 102 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHHhCCCCCccc---EEEeCCh
Confidence 345777765543 36778888776554321 12211 122345665555666655554 3332 2334445
Q ss_pred hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhcCCcEE
Q 018318 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLI 185 (358)
Q Consensus 107 t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v 185 (358)
++|+..++.+++++||+|+++.|+|.++.. .+...|.. +++++++.+ ++.+|++++++.+++ ++++|
T Consensus 103 ~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~---------~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v 170 (391)
T PRK08361 103 YEATYLAFESLLEEGDEVIIPDPAFVCYVE---------DAKIAEAK--PIRIPLREENEFQPDPDELLELITK-RTRMI 170 (391)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcccHH---------HHHHcCCE--EEEEecCCccCCCCCHHHHHHhccc-ccEEE
Confidence 679999999999999999999998765431 23345654 444444433 457999999999875 68888
Q ss_pred EEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C-cccEEEecCCccCC--CCCeeEE
Q 018318 186 ICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YCHIVTTTTHKSLR--GPRAGMI 254 (358)
Q Consensus 186 ~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~-~~d~~~~s~~K~l~--g~~gG~i 254 (358)
++++++|| ...| +++|.++|+++++++|+|++++ .+.+.+....++ . ..++++.|++|.++ |.|.|++
T Consensus 171 ~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~ 249 (391)
T PRK08361 171 VINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE-HFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFV 249 (391)
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccc-cceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhh
Confidence 88877776 4556 7899999999999999999964 333221111111 1 35688999999873 4456999
Q ss_pred EEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHhhC-
Q 018318 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAST-PAFKAYAKQVKANAVALGNYLTGK- 332 (358)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~- 332 (358)
+++++ +.+.+........ .+.+.....+...++..-.. ..++...+++.++++.+.+.|++.
T Consensus 250 ~~~~~---------------~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 313 (391)
T PRK08361 250 IAPEQ---------------VIKDMIKLHAYII-GNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMP 313 (391)
T ss_pred ccCHH---------------HHHHHHHHHhhhc-cCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99763 4443332211111 11121112222222321110 123566777788888999999887
Q ss_pred CceeeeCCCcceEEEEEcCCCCC
Q 018318 333 GYSLVTGGTENHLVLWDLRPLGL 355 (358)
Q Consensus 333 G~~~~~~~~~~~~~~v~~~~~~~ 355 (358)
|+++.. +..+..+|+.+...++
T Consensus 314 ~~~~~~-p~g~~~~~~~l~~~~~ 335 (391)
T PRK08361 314 HIKVFE-PKGAFYVFANIDETGM 335 (391)
T ss_pred CCeecC-CCEEEEEEEECCCCCC
Confidence 787765 4567779998864443
No 110
>PRK08912 hypothetical protein; Provisional
Probab=99.84 E-value=8.4e-19 Score=167.31 Aligned_cols=307 Identities=17% Similarity=0.143 Sum_probs=187.2
Q ss_pred hhcccccccchHHHHHHHHHHHHhhcceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 018318 7 WGNSSLETVDPEIHDLIEKEKRRQCRGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRS 84 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~ 84 (358)
|.++.++++++..+..+...+. ....+.|..+.. ..|+.+.+++.+.+.... .+|+.. ....++.+.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~~------~G~~~lr~~ia~ 74 (387)
T PRK08912 3 MGNPVFADLPTTIFEVMSQLAR-EHGAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPPM------MGLPELRQAVAA 74 (387)
T ss_pred hhhHHHhhCCCCHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC------CCcHHHHHHHHH
Confidence 3355666666665554444322 234566665432 236778877766543221 223321 222345555566
Q ss_pred HHHHhcCCCCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC
Q 018318 85 RALQTFHLDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS 163 (358)
Q Consensus 85 ~la~~~g~~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 163 (358)
++.+.+|...+.. ..|++++| ++|+..++.+++++||+|++..|.|+.+.. .+...|..+ +.++++.
T Consensus 75 ~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~---------~~~~~g~~~--~~~~~~~ 142 (387)
T PRK08912 75 HYARFQGLDLDPE-TEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP---------LIRRAGGVP--RLVRLEP 142 (387)
T ss_pred HHHHHhCCCCCCc-ccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH---------HHHHcCCEE--EEEecCc
Confidence 7776667532100 12444554 679988999999999999999998765431 234456544 4444443
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCC---CC--
Q 018318 164 STGYIDYDKLEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FE-- 233 (358)
Q Consensus 164 ~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~---~~-- 233 (358)
+++.+|++++++.+.. ++++|++++++||+ .. ++++|.++|++|++++|+|+++. .+.+.+....+ +.
T Consensus 143 ~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~ 220 (387)
T PRK08912 143 PHWRLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE-HVVFDGRRHIPLMTLPGM 220 (387)
T ss_pred ccCcCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh-hcccCCCCCcChhhCCCc
Confidence 4578999999998864 78888888888773 33 47789999999999999999964 33332211111 11
Q ss_pred -cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH
Q 018318 234 -YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA 310 (358)
Q Consensus 234 -~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~ 310 (358)
..+++++|++|.+ +|.|.|+++++++ +.+.+.........+.+. ....++..++.. ....
T Consensus 221 ~~~~i~~~S~SK~~g~~GlRiG~~~~~~~---------------~~~~l~~~~~~~~~~~~~-~~q~~~~~~l~~-~~~~ 283 (387)
T PRK08912 221 RERTVKIGSAGKIFSLTGWKVGFVCAAPP---------------LLRVLAKAHQFLTFTTPP-NLQAAVAYGLGK-PDDY 283 (387)
T ss_pred cCceEEEeechhhccCcCceeEEEecCHH---------------HHHHHHHHHhhccccCCh-HHHHHHHHHHhC-CHHH
Confidence 3468999999986 4567799998773 444443321111111111 112222333321 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCCC
Q 018318 311 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL 353 (358)
Q Consensus 311 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~~ 353 (358)
++..++++.++++++.+.|+..|+++.. +..++.+|+++.+.
T Consensus 284 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g~~~l~~~l~~~ 325 (387)
T PRK08912 284 FEGMRADLARSRDRLAAGLRRIGFPVLP-SQGTYFLTVDLAPL 325 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccC-CCcceEEEeccccc
Confidence 3566778888999999999999988765 46778899988653
No 111
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.1e-18 Score=167.39 Aligned_cols=283 Identities=14% Similarity=0.103 Sum_probs=177.2
Q ss_pred ceeEecc-CC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC--CCCCCccccccCC-
Q 018318 33 GIELIAS-EN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PTQWGVNVQPYSG- 106 (358)
Q Consensus 33 ~~~l~a~-~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~--~~~~~~~v~~~sG- 106 (358)
.+.+..+ ++ .+++.+.+++.+.+......+|+.. .|. ..|.+.+++++++++|.+ +++ .|+.++|
T Consensus 41 ~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~---~G~---~~LR~aia~~l~~~~g~~~~~~~---~I~it~Ga 111 (405)
T PRK06207 41 PVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEY---RGD---ADIRELLAARLAAFTGAPVDAAD---ELIITPGT 111 (405)
T ss_pred ceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCC---CCC---HHHHHHHHHHHHHHhCCCCCCCC---CEEEeCCc
Confidence 4566643 33 3567888888776543211234332 122 345556678889888964 211 2445555
Q ss_pred hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc-C-CCCCCCCHHHHHHHHhhcCCcE
Q 018318 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV-N-SSTGYIDYDKLEEKALDFRPKL 184 (358)
Q Consensus 107 t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~~~id~~~l~~~l~~~~~~~ 184 (358)
++++..++.++++|||+|++..|.|.++.. .++..|.++..++++. + +.++.+|++++++++++ ++++
T Consensus 112 ~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~---------~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~k~ 181 (405)
T PRK06207 112 QGALFLAVAATVARGDKVAIVQPDYFANRK---------LVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA-GVRV 181 (405)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhHHH---------HHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh-cCeE
Confidence 569999999999999999999998875431 2345565544444321 1 12467999999999865 6888
Q ss_pred EEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C---cccEEEecCCccC--CCCCe
Q 018318 185 IICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E---YCHIVTTTTHKSL--RGPRA 251 (358)
Q Consensus 185 v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~---~~d~~~~s~~K~l--~g~~g 251 (358)
|++++|+||+ .. .+++|.++|++||+++|+|+++. .+.+.+....++ . .--+++.|++|.+ +|.|.
T Consensus 182 v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~-~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRi 260 (405)
T PRK06207 182 FLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYS-RLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRL 260 (405)
T ss_pred EEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccce
Confidence 8888888873 34 47889999999999999999953 444322111111 1 1127889999986 57889
Q ss_pred eEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 252 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
|++++++ ++.+.+.........+ .+.....++..++.. ....+++.+++..++++.+.+.|++
T Consensus 261 G~ii~~~---------------~l~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~ 323 (405)
T PRK06207 261 GVAFGSP---------------AIIDRMEKLQAIVSLR-AAGYSQAVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRG 323 (405)
T ss_pred EEEEcCH---------------HHHHHHHHHHhHhccC-CCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999876 3444444322111111 121222222333321 1112466677788888899999988
Q ss_pred C-CceeeeCCCcceEEEEEcCCC
Q 018318 332 K-GYSLVTGGTENHLVLWDLRPL 353 (358)
Q Consensus 332 ~-G~~~~~~~~~~~~~~v~~~~~ 353 (358)
. |+++.. +..+..+|+++.+.
T Consensus 324 ~~~~~~~~-p~gg~fl~~~l~~~ 345 (405)
T PRK06207 324 VEGVFVRA-PQAGSYLFPRLPRL 345 (405)
T ss_pred CCCceecC-CCeeEEEEEeCccc
Confidence 7 787664 45678899998653
No 112
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=6.1e-20 Score=173.95 Aligned_cols=213 Identities=21% Similarity=0.217 Sum_probs=148.0
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+..++|| +++++++|.+. .+.+++|+.|+.+++. ++++||+|+++.+.|++...... ..+...
T Consensus 45 ~~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~-----~~~~~~ 109 (378)
T TIGR01329 45 GNPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLT-----QVVPRS 109 (378)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHH-----HHHHHc
Confidence 446667777 78999999864 3668889888887665 78999999999888875431100 011224
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+ ++..++. .|++++++++++ ++++|++++++|+ .+.|+++|+++||++|+++++|++|+.+..
T Consensus 110 G~--~v~~vd~------~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~----- 175 (378)
T TIGR01329 110 GV--VVVHVDT------TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL----- 175 (378)
T ss_pred Cc--EEEEeCC------CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 54 3444432 389999999974 7899998887766 567999999999999999999999876643
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
..+++ ++|++++|++|+++|+. +|+++++++ ++.+++...... .|....+.-+ +..++
T Consensus 176 ~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~--------------~~~~~~~~~~~~--~G~~~~~~~a--~l~~~ 237 (378)
T TIGR01329 176 CNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE--------------EIAKKVYFLQNS--TGSGLAPFDC--WLLLR 237 (378)
T ss_pred CChhhcCCcEEEEecceeccCCccceeEEEEeCcH--------------HHHHHHHHHHHh--cCCcCCHHHH--HHHHc
Confidence 23445 89999999999998764 688888664 444444432211 1111111111 12222
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
.+ +.+..++++..+|+..+.++|+++
T Consensus 238 ~l--~tl~~R~e~~~~na~~la~~L~~~ 263 (378)
T TIGR01329 238 GI--KTLAIRIEKQQENARAIAMFLSTH 263 (378)
T ss_pred cC--CCHHHHHHHHHHHHHHHHHHHHhC
Confidence 22 346788999999999999999986
No 113
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.84 E-value=5.7e-19 Score=168.16 Aligned_cols=272 Identities=21% Similarity=0.188 Sum_probs=172.6
Q ss_pred cceeEeccCC--C-CCHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh
Q 018318 32 RGIELIASEN--F-TSFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (358)
Q Consensus 32 ~~~~l~a~~~--~-~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt 107 (358)
+.+.+..+++ + .+|.|.+++.+.+. +++.+++..+...+. +... +.++++++++|.+. .+++++|+
T Consensus 40 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~----~l~~~la~~~~~~~-----~i~~~~g~ 109 (385)
T PRK05958 40 RMLNFASNDYLGLARHPRLIAAAQQAAR-RYGAGSGGSRLVTGNSPAHE----ALEEELAEWFGAER-----ALLFSSGY 109 (385)
T ss_pred eEEEeeCCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHH----HHHHHHHHHhCCCc-----EEEECcHH
Confidence 4566666643 3 47899999988875 333233222222222 2233 34588999998543 36678888
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc--CCcEE
Q 018318 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLI 185 (358)
Q Consensus 108 ~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~--~~~~v 185 (358)
+++..++.++++|||+|++..+.|++... .+...|..+ +.++ ..|++++++++++. ++.++
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~---------~~~~~g~~~--~~~~------~~d~~~l~~~i~~~~~~~~lv 172 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLID---------GARLSRARV--RRYP------HNDVDALEALLAKWRAGRALI 172 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHH---------HHHhcCCce--EEeC------CCCHHHHHHHHHhccCCCeEE
Confidence 88887878889999999999988775431 123345433 3332 25889999998753 24555
Q ss_pred EEcCCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhc-cc-cCC--CCC--cccEEEecCCccCCCCCeeEEEEe
Q 018318 186 ICGGSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE-AAN--PFE--YCHIVTTTTHKSLRGPRAGMIFYR 257 (358)
Q Consensus 186 ~~~~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~-~~-~~~--~~~--~~d~~~~s~~K~l~g~~gG~i~~~ 257 (358)
+++++. .|...++++|.++|++||+++|+|++|+.|.... +. ... .+. ..++++.|+||++ |+.||+++.+
T Consensus 173 i~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~ 251 (385)
T PRK05958 173 VTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGS 251 (385)
T ss_pred EEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcC
Confidence 555443 3456789999999999999999999997664431 11 000 122 2348889999998 4677888777
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCC-cCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCcee
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~ 336 (358)
+ ++.+.+.....+.. .++++....+++.++++.+.. .....+++.++++++.+.|++.|+++
T Consensus 252 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~ 314 (385)
T PRK05958 252 E---------------TLIDYLINRARPFIFTTALPPAQAAAARAALRILRR--EPERRERLAALIARLRAGLRALGFQL 314 (385)
T ss_pred H---------------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 6 34444432211221 222344444455566665432 14567888999999999999988886
Q ss_pred eeCCCcceEEEEEc
Q 018318 337 VTGGTENHLVLWDL 350 (358)
Q Consensus 337 ~~~~~~~~~~~v~~ 350 (358)
.. ..+..+++.+
T Consensus 315 ~~--~~~~~~~~~~ 326 (385)
T PRK05958 315 MD--SQSAIQPLIV 326 (385)
T ss_pred CC--CCCCEEEEEe
Confidence 54 3455667665
No 114
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=9.7e-20 Score=173.88 Aligned_cols=216 Identities=15% Similarity=0.194 Sum_probs=150.5
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+...+|| +.+++++|.+. .+.+++|+.|+..++.++++|||+|+++.+.|++.+.... ..+...
T Consensus 62 ~~p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~-----~~~~~~ 127 (400)
T PRK06234 62 GNPTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLN-----HGLTRY 127 (400)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH-----HHHhhC
Confidence 345667787 78999999764 3778899999999999999999999999988876442110 012334
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHh--CCEEEEechhhhhhhhcc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKC--GALLLCDMAHISGLVAAQ 226 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~--g~~lvvD~a~~~g~~~~~ 226 (358)
|+ ++..++. .|++++++++.+ ++++|++++++|| ...|+++|.++|+++ |+++++|++++.+...
T Consensus 128 G~--~v~~vd~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~-- 196 (400)
T PRK06234 128 GV--EVTFVDT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ-- 196 (400)
T ss_pred Ce--EEEEECC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC--
Confidence 54 4445532 379999999975 7899998888776 577999999999997 9999999998765432
Q ss_pred ccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHH
Q 018318 227 EAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVA 302 (358)
Q Consensus 227 ~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 302 (358)
.++. ++|++++|++|+++|+. ||+++++++ +.+.++........+....+..+ +.+
T Consensus 197 ---~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~---------------~~~~l~~~~~~~~~g~~l~p~~a--~l~ 256 (400)
T PRK06234 197 ---RPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEE---------------FINQVKLFGIKDMTGSVIGPFEA--FLI 256 (400)
T ss_pred ---CchhhCCcEEEeeccccccCCCCceeEEEEecHH---------------HHHHHHHHHHHHhcCCCCCHHHH--HHH
Confidence 3344 89999999999997653 699888773 44444321111111221222222 223
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 303 LKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
++.+ +.+..++++.++|++++.++|+++.
T Consensus 257 ~~~l--~tl~~r~~~~~~na~~~a~~L~~~~ 285 (400)
T PRK06234 257 IRGM--KTLQIRMEKHCKNAMKVAKFLESHP 285 (400)
T ss_pred Hhcc--CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3332 2356788889999999999999863
No 115
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.1e-19 Score=173.40 Aligned_cols=214 Identities=21% Similarity=0.226 Sum_probs=149.7
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+....|| ++++++.|.+. .+++++|++|+.+++.++++|||+|++..+.|++..... . ..+...
T Consensus 58 ~~p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~--~---~~~~~~ 123 (405)
T PRK08776 58 GNPTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLF--N---ALAKKG 123 (405)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHH--H---HHHHhc
Confidence 445666777 78999999865 377899999999999999999999999988887532100 0 011122
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
| ++++.++ ..|++++++++++ ++++|++++++|| ...|+++|.++|+++|+++++|++|+.+..
T Consensus 124 g--~~v~~v~------~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~----- 189 (405)
T PRK08776 124 H--FALITAD------LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL----- 189 (405)
T ss_pred C--cEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 3 2344442 2588999999865 7899998888877 567999999999999999999999876532
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhc-CCCCcCCCChhHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVAL 303 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~al~~al 303 (358)
..++. ++|++++|++|+++|+. ||+++++++ ++.+++.... ..+. ..+ .+. .+..+
T Consensus 190 ~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~--------------~l~~~l~~~~~~~g~--~~s--~~~-a~l~~ 250 (405)
T PRK08776 190 QKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDA--------------ELHQQLVWWANALGL--TGS--PFD-AFLTL 250 (405)
T ss_pred CCcccccCCEEEecCceeecCCCCceEEEEEeCCH--------------HHHHHHHHHHHhcCC--CCC--HHH-HHHHH
Confidence 23455 89999999999998764 688877654 4555443321 1111 111 111 12223
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 304 KQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
+.+ +-++.+++++.+|+..+.++|+++.
T Consensus 251 ~gl--~tl~~r~~~~~~na~~la~~L~~~p 278 (405)
T PRK08776 251 RGL--RTLDARLRVHQENADAIAALLDGHA 278 (405)
T ss_pred hhh--CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 322 2357888999999999999999873
No 116
>PRK05968 hypothetical protein; Provisional
Probab=99.84 E-value=1.4e-19 Score=172.12 Aligned_cols=218 Identities=18% Similarity=0.131 Sum_probs=150.9
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+.+.+|| +++++++|.+. .+.++||+.|+..++.++++|||+|++..+.|++.+.... ..+...
T Consensus 61 ~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~-----~~~~~~ 126 (389)
T PRK05968 61 DNPTVRAFE----EMLAKLEGAED-----ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFE-----TILKRM 126 (389)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH-----HHHHHc
Confidence 345677887 78999999986 3667999999999999899999999999988876432110 012234
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+ ++..++ ..|++++++++ + ++++|+++++.++ ...|+++|+++||+||+++++|++|+.+...
T Consensus 127 G~--~v~~vd------~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~---- 192 (389)
T PRK05968 127 GV--EVDYVD------GRDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ---- 192 (389)
T ss_pred Cc--eEEEeC------CCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc----
Confidence 54 344443 23889999988 3 6899988877665 3578999999999999999999998766432
Q ss_pred CCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
.++. ++|++++|++|+++|+ .||+++.++ ++.+++.....+...+..+ ...++ ..++
T Consensus 193 -~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~---------------~~~~~l~~~~~~~~g~~~~-~~~A~--~~l~ 253 (389)
T PRK05968 193 -RPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK---------------EHIARINAEAYPYLGAKLS-PFEAW--LLLR 253 (389)
T ss_pred -CchhcCCcEEEeeccccccCCCCeEEEEEEECH---------------HHHHHHHHHHHHhCCCCCC-hHHHH--HHHc
Confidence 2344 8899999999999875 468877665 3444444322222111112 22222 2233
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceee
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGK-GYSLV 337 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~ 337 (358)
.+ +.+..++++..++++++.++|+++ +++..
T Consensus 254 ~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v 285 (389)
T PRK05968 254 GL--RTLPLRMKAHEASALEIARRLKAHPVVERV 285 (389)
T ss_pred cc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 33 346788899999999999999987 56443
No 117
>PRK08068 transaminase; Reviewed
Probab=99.84 E-value=1.4e-18 Score=165.82 Aligned_cols=303 Identities=15% Similarity=0.094 Sum_probs=182.6
Q ss_pred ccccccchHHHHHHHHHHHHh----hcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHH
Q 018318 10 SSLETVDPEIHDLIEKEKRRQ----CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCR 83 (358)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~----~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~ 83 (358)
+++..+.+..+..+.+.+++. .+.+.|..++.. .++.+.+++.+.+.......|+. .....+|.+.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~aia 80 (389)
T PRK08068 7 ELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP------FRGYPFLKEAAA 80 (389)
T ss_pred hHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHH
Confidence 344444554444444443333 234666655432 35778888876654321122322 122335555555
Q ss_pred HHHHHhcCC--CCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 84 SRALQTFHL--DPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 84 ~~la~~~g~--~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
+++.+.+|. ++++ .|+.++| ++++..++.+++++||+|+++.|+|+.+.. .++..|..+. .++
T Consensus 81 ~~~~~~~g~~~~~~~---~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g~~~~--~i~ 146 (389)
T PRK08068 81 DFYKREYGVTLDPET---EVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLS---------GVALARAQFE--TMP 146 (389)
T ss_pred HHHHHHhCCCCCCCc---cEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcCCEEE--Eee
Confidence 666555574 3321 2444555 568888888889999999999998875431 2345665444 444
Q ss_pred cCCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCC-CC
Q 018318 161 VNSS-TGYIDYDKLEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANP-FE 233 (358)
Q Consensus 161 ~~~~-~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~-~~ 233 (358)
.+.+ ++.+|++++++.+.+ ++++|++++|+||+ .. .+++|.++|++||+++|+|+++. .+.+.+..+.+ +.
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~-~~~~~~~~~~s~~~ 224 (389)
T PRK08068 147 LIAENNFLPDYTKIPEEVAE-KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYG-AIGFDGQKPVSFLQ 224 (389)
T ss_pred cccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhh-hhccCCCCCcChhh
Confidence 4433 457899999998864 78999888888773 33 46788889999999999999953 33332211111 11
Q ss_pred -----cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHh
Q 018318 234 -----YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA 306 (358)
Q Consensus 234 -----~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~ 306 (358)
...+++.|++|.| +|.|.|++++++ ++.+.+.....+...+ .......+...++..
T Consensus 225 ~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~---------------~l~~~l~~~~~~~~~~-~~~~~q~~~~~~l~~- 287 (389)
T PRK08068 225 TPGAKDVGIELYTLSKTFNMAGWRVAFAVGNE---------------SVIEAINLLQDHLFVS-LFGAIQDAAIEALLS- 287 (389)
T ss_pred CCCccCCEEEEecchhccCCccceeEeEecCH---------------HHHHHHHHHHhhccCC-CChHHHHHHHHHHhC-
Confidence 2347889999987 566789999876 3555444332222111 111111222222221
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 307 STPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
....++..++++.++++++.+.|++.|+.+.. +..++.+|+.+..
T Consensus 288 ~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~-~~g~~~~~v~~~~ 332 (389)
T PRK08068 288 DQSCVAELVARYESRRNAFISACREIGWEVDA-PKGSFFAWMPVPK 332 (389)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCeeEEEEEECCC
Confidence 11234667788888999999999999987664 4567778998753
No 118
>PRK07682 hypothetical protein; Validated
Probab=99.84 E-value=8.4e-19 Score=166.80 Aligned_cols=283 Identities=15% Similarity=0.108 Sum_probs=176.9
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC--CCCCCccccccCC-
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PTQWGVNVQPYSG- 106 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~--~~~~~~~v~~~sG- 106 (358)
..+.|..++.. +++.+.+++.+.+.... .+|+. ......+.+.+.+++.+.+|.. +++ .|++++|
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~~---~i~~t~G~ 90 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQGY-TSYTA------NAGLLELRQEIAKYLKKRFAVSYDPND---EIIVTVGA 90 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCCC---cEEEeCCh
Confidence 45777766543 35667777766553221 22322 1223455555667777766653 221 2445555
Q ss_pred hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHHhhcCCcEE
Q 018318 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLI 185 (358)
Q Consensus 107 t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~~~~~~v 185 (358)
++|+..++.++++|||+|++..|+|+.+.. .++..|..+ ++++.+. +++.+|++++++++.+ ++++|
T Consensus 91 ~~al~~~~~~l~~~gd~vl~~~p~y~~~~~---------~~~~~g~~~--~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 158 (378)
T PRK07682 91 SQALDVAMRAIINPGDEVLIVEPSFVSYAP---------LVTLAGGVP--VPVATTLENEFKVQPAQIEAAITA-KTKAI 158 (378)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCchhhHH---------HHHHcCCEE--EEeecCCccCCCCCHHHHHhhcCc-ccEEE
Confidence 679999999999999999999998764321 223455543 3444332 2568999999998865 78888
Q ss_pred EEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCC--CCC---cccEEEecCCccC--CCCCeeE
Q 018318 186 ICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE---YCHIVTTTTHKSL--RGPRAGM 253 (358)
Q Consensus 186 ~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~--~~~---~~d~~~~s~~K~l--~g~~gG~ 253 (358)
++++++||+ .. ++++|.++|++|++++|+|+++. .+.+.+.... .+. ...+++.|++|++ +|.|.|+
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ 237 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYA-ELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF 237 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhh
Confidence 888888773 32 48899999999999999999954 4443321110 111 2358899999987 3666799
Q ss_pred EEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
++++++ +.+.+.........+ .+.....+...++.. ........++++.++++++.+.|++.|
T Consensus 238 ~~~~~~---------------~i~~l~~~~~~~~~~-~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~ 300 (378)
T PRK07682 238 IAAPVY---------------FSEAMLKIHQYSMMC-APTMAQFAALEALRA-GNDDVIRMRDSYRKRRNFFVTSFNEIG 300 (378)
T ss_pred hhcCHH---------------HHHHHHHHHHhhccC-CCHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 998773 444443321111111 122222222333322 112345667778899999999999999
Q ss_pred ceeeeCCCcceEEEEEcCCCCC
Q 018318 334 YSLVTGGTENHLVLWDLRPLGL 355 (358)
Q Consensus 334 ~~~~~~~~~~~~~~v~~~~~~~ 355 (358)
+++.. +..++.+|+.+.+.++
T Consensus 301 ~~~~~-p~g~~~~~~~~~~~~~ 321 (378)
T PRK07682 301 LTCHV-PGGAFYAFPSISSTGL 321 (378)
T ss_pred CccCC-CCeeEEEEEeccCCCC
Confidence 88764 4567888988765443
No 119
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.9e-18 Score=165.17 Aligned_cols=280 Identities=15% Similarity=0.121 Sum_probs=172.8
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC--CCCCCccccccCC-
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PTQWGVNVQPYSG- 106 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~--~~~~~~~v~~~sG- 106 (358)
+.+.+..++.. .|+.+++++...+......+|+.. .....|.+.+.+++.+.+|.+ ++ ..+++++|
T Consensus 36 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lr~aia~~~~~~~~~~~~~~---~~i~vt~G~ 106 (394)
T PRK05942 36 DLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPF------EGTASFRQAITDWYHRRYGVELDPD---SEALPLLGS 106 (394)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCC------CCCHHHHHHHHHHHHHHHCCCcCCC---CeEEEccCh
Confidence 44666654322 356677776655432111223321 222355555567777666753 32 12445555
Q ss_pred hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhcCCcEE
Q 018318 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLI 185 (358)
Q Consensus 107 t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v 185 (358)
++|+..++.++++|||+|++..|+|+.+.. .+...|.+ +++++.+.+ ++.+|++++++.+.+ ++++|
T Consensus 107 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i 174 (394)
T PRK05942 107 KEGLTHLALAYVNPGDVVLVPSPAYPAHFR---------GPLIAGAQ--IYPIILKPENDWLIDLSSIPEEVAQ-QAKIL 174 (394)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHHcCCE--EEEeecCCccCCccCHHHHHHhccc-cceEE
Confidence 569999999999999999999998876532 12345654 444444422 457999999998864 78999
Q ss_pred EEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCC---CC---cccEEEecCCccC--CCCCee
Q 018318 186 ICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FE---YCHIVTTTTHKSL--RGPRAG 252 (358)
Q Consensus 186 ~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~---~~---~~d~~~~s~~K~l--~g~~gG 252 (358)
++++++|| ...+ +++|.++|++||+++|+|+++. .+.+.+....+ +. ...+.+.|++|.+ +|.|.|
T Consensus 175 ~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG 253 (394)
T PRK05942 175 YFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA-ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVG 253 (394)
T ss_pred EEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCCChhhCCCccccEEEEecchhccCChhhhee
Confidence 88888877 3444 7899999999999999999954 33332211111 11 2347789999976 466779
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++++++ ++.+.+....... ..+.+.....++..++.. .....+..++++.++++++.+.|.+.
T Consensus 254 ~i~~~~---------------~l~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~ 316 (394)
T PRK05942 254 FVVGNR---------------HIIQGLRTLKTNL-DYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGEL 316 (394)
T ss_pred eeecCH---------------HHHHHHHHHHhhc-ccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999876 3555554322111 111222222233334432 12234566777888889999999988
Q ss_pred CceeeeCCCcceEEEEEcC
Q 018318 333 GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 333 G~~~~~~~~~~~~~~v~~~ 351 (358)
|+++.. +..+..+|+++.
T Consensus 317 ~~~~~~-~~~~~f~~~~~~ 334 (394)
T PRK05942 317 GWNIPP-TKATMYLWVPCP 334 (394)
T ss_pred CCeecC-CCeeeEEEEECC
Confidence 988765 456667888875
No 120
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=1.6e-19 Score=170.01 Aligned_cols=219 Identities=17% Similarity=0.202 Sum_probs=151.1
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++.++|+ +.+...+|| ++++++.|.+. .+.++||++|+.+++ .++++||+|+++.+.|++.+... .
T Consensus 45 ~~~Y~R~--~~p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~--~ 110 (364)
T PRK07269 45 GFDYTRT--KNPTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWF--N 110 (364)
T ss_pred CcceeCC--CCccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHH--H
Confidence 3455554 456778888 78999999775 377889999999888 46799999999988776543110 0
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
.....+ .+ .+ ++..|++++++++.+ ++|+|++++++|| ...|+++|+++|+++|+++++|++++
T Consensus 111 ----~~~~~~-~~-----~~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~ 176 (364)
T PRK07269 111 ----QQEKEG-RF-----HF---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFY 176 (364)
T ss_pred ----HHHhcC-cE-----EE---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCc
Confidence 000001 11 11 234689999999975 7899999988887 46799999999999999999999976
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.+.. ..++. ++|++++|++|+++|+. ||+++++++ ++.+++..... ..|....+
T Consensus 177 ~~~~-----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~--------------~l~~~~~~~~~--~~G~~~s~- 234 (364)
T PRK07269 177 SPIY-----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDL--------------ELYEKLFYNLN--TTGAVLSP- 234 (364)
T ss_pred cccc-----CCchhhCCcEEEecCceeccCCCcccceEEEeCcH--------------HHHHHHHHHHH--HhCCCCCH-
Confidence 5432 24555 89999999999998743 688888664 45444432211 11211111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
+. .+.+++.+ +.+..++++.++|++++.++|+++.
T Consensus 235 ~~-a~l~~~~L--~tL~~r~~~~~~na~~~a~~L~~~p 269 (364)
T PRK07269 235 FD-SYLLMRGL--KTLSLRMERSTANAQEVVAFLKKSP 269 (364)
T ss_pred HH-HHHHHcCC--CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 11 12333333 3477889999999999999999873
No 121
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.84 E-value=1.1e-19 Score=172.40 Aligned_cols=221 Identities=19% Similarity=0.224 Sum_probs=151.3
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++.++++ +.+...++| +.+++++|++. .+.++||+.|+..++.+++++||+|++..+.|++.+... .
T Consensus 45 ~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~--~ 111 (380)
T TIGR01325 45 GFVYSRY--ANPTVAAFE----ERIAALEGAER-----AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFI--S 111 (380)
T ss_pred CcceecC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHH--H
Confidence 3444444 345667787 78999999865 366889999999999999999999999888776543111 0
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
..+...|. ++..++. .|++++++++++ ++++|++++++|+ ...|+++|.++|+++|+++++|++|+
T Consensus 112 ---~~~~~~g~--~v~~v~~------~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~ 179 (380)
T TIGR01325 112 ---EILPRFGI--EVSFVDP------TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFA 179 (380)
T ss_pred ---HHHHHhCC--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCc
Confidence 01223454 3444432 378999998864 7899998888765 56799999999999999999999987
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.+... .+++ ++|++++|++|+++|+ .||+++++++ +.+.+...... .|....+.
T Consensus 180 ~~~~~-----~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~---------------~~~~l~~~~~~--~g~~~~p~ 237 (380)
T TIGR01325 180 TPVLQ-----QPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEE---------------LMAEVAVYLRH--TGPAMSPF 237 (380)
T ss_pred ccccC-----CchhhCCCEEEeeccceecCCCCeEEEEEEeCHH---------------HHHHHHHHHHh--hCCCCCHH
Confidence 55321 3445 8999999999999765 2588887763 33333322111 11111111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
.+ +.+++.+ +.+..++++..++++++.++|++++
T Consensus 238 -~a-~~~l~~l--~tl~~r~~~~~~~a~~la~~L~~~p 271 (380)
T TIGR01325 238 -NA-WVLLKGL--ETLSLRMQKQFDSALAIAEWLQAQP 271 (380)
T ss_pred -HH-HHHHhcc--CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11 2333332 3456788999999999999999874
No 122
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=5.8e-20 Score=173.36 Aligned_cols=220 Identities=12% Similarity=0.068 Sum_probs=154.0
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCcccccccccc
Q 018318 63 MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS 142 (358)
Q Consensus 63 ~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~ 142 (358)
|.++|. +++..+.|| ++++++-|.+. .+.++||+.|+.+++.+++++||+|++....|++..... .
T Consensus 54 ~~YsR~--~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~--~- 119 (395)
T PRK08114 54 LFYGRR--GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFC--S- 119 (395)
T ss_pred ccccCC--CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHH--H-
Confidence 555543 678888998 78899988876 367889999999999999999999999887776543211 0
Q ss_pred CCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhC--CEEEEechh
Q 018318 143 GGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCG--ALLLCDMAH 218 (358)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g--~~lvvD~a~ 218 (358)
..+...|+ ++..++ ..|++.+++++++ ++|+|+++++.|+ .+.|+++|+++||++| ++++||++|
T Consensus 120 --~~l~~~Gi--~v~~vd------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~ 188 (395)
T PRK08114 120 --KILSKLGV--TTTWFD------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTW 188 (395)
T ss_pred --HHHHhcCc--EEEEEC------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCC
Confidence 01122354 344442 2578999999975 7899999888777 4679999999999984 999999999
Q ss_pred hhhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChh
Q 018318 219 ISGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNH 294 (358)
Q Consensus 219 ~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (358)
+.+.. ..+++ ++|++++|+||++.|+. +|+++.++ ++.+.+..... ..|....+
T Consensus 189 a~p~~-----~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~---------------~~~~~l~~~~~--~~G~~~~p 246 (395)
T PRK08114 189 AAGVL-----FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA---------------RCWEQLRENSY--LMGQMVDA 246 (395)
T ss_pred ccccc-----cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH---------------HHHHHHHHHHH--hccCCCCH
Confidence 87754 24455 99999999999998873 47666554 23233332111 11221111
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 295 QIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 295 ~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
..+ +..++-+ +-+.-+++++.+|+..+.++|+++.
T Consensus 247 -~~a-~l~~rgl--~TL~lR~~~~~~na~~va~~L~~hp 281 (395)
T PRK08114 247 -DTA-YMTSRGL--RTLGVRLRQHEESSLKVAEWLAEHP 281 (395)
T ss_pred -HHH-HHHHcCC--CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 111 2222222 3467889999999999999999874
No 123
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.84 E-value=3.3e-19 Score=169.20 Aligned_cols=162 Identities=14% Similarity=0.066 Sum_probs=120.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCCCCeEEEecCCCCccccccccccCCccccccc
Q 018318 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g 151 (358)
+.++.+| +++++++|.+. .+++++|+.|+..++.++ ++|||+|+++.++|.+... .+...|
T Consensus 31 ~~~~~~e----~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~---------~~~~~G 92 (375)
T PRK11706 31 GFTRRCQ----QWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTAN---------AFVLRG 92 (375)
T ss_pred HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHH---------HHHHcC
Confidence 4556676 77889999875 366778888988887766 7999999999988765431 234456
Q ss_pred ceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCC
Q 018318 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANP 231 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~ 231 (358)
. ++++++++.+++.+|++++++++.+ ++++|++++ .+|...++++|.++|++||+++|+|++|+.|..+.+. +
T Consensus 93 ~--~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~-~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~---~ 165 (375)
T PRK11706 93 A--KIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVH-YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGR---A 165 (375)
T ss_pred C--EEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeC-CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCe---e
Confidence 5 4556666655568999999999875 788887664 3677789999999999999999999999988643321 2
Q ss_pred CC-cccEEEecCC--ccCCCCCeeEEEEeCC
Q 018318 232 FE-YCHIVTTTTH--KSLRGPRAGMIFYRKG 259 (358)
Q Consensus 232 ~~-~~d~~~~s~~--K~l~g~~gG~i~~~~~ 259 (358)
+. ..|+.++|+| |.++...||+++++++
T Consensus 166 ~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~ 196 (375)
T PRK11706 166 LGTIGHIGCFSFHETKNYTAGEGGALLINDP 196 (375)
T ss_pred eecCcCEEEEeCCCCccccccCCeEEEECCH
Confidence 22 4577778877 9986556677777653
No 124
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.84 E-value=2.6e-18 Score=164.56 Aligned_cols=301 Identities=15% Similarity=0.105 Sum_probs=182.4
Q ss_pred ccccccchHHHHHHHHHHHHh----hcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHH
Q 018318 10 SSLETVDPEIHDLIEKEKRRQ----CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCR 83 (358)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~----~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~ 83 (358)
+++.++.++.+..+...+... .+.+.+..++.. +++.+.+++.+.+......+|+. .| ...+.+.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~----~G---~~~lr~aia 79 (399)
T PRK07681 7 TRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTL----SG---IQEFHEAVT 79 (399)
T ss_pred HHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCC----CC---cHHHHHHHH
Confidence 344444455444443332221 245666665442 47888888876653221112221 12 234444555
Q ss_pred HHHHHhcCC--CCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 84 SRALQTFHL--DPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 84 ~~la~~~g~--~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
+++.+.+|. ++++ .|++++| ++|+..++.+++++||+|+++.|.|..+.. .+...|+. +++++
T Consensus 80 ~~~~~~~g~~~~~~~---~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~---------~~~~~G~~--~~~v~ 145 (399)
T PRK07681 80 EYYNNTHNVILNADK---EVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYET---------GIQMAGAT--SYYMP 145 (399)
T ss_pred HHHHHHhCCCCCCCC---eEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHH---------HHHhcCCE--EEEEe
Confidence 666666564 3311 2555666 469999999999999999999998875431 23456654 44444
Q ss_pred cCCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCC---
Q 018318 161 VNSS-TGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANP--- 231 (358)
Q Consensus 161 ~~~~-~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~--- 231 (358)
++++ ++.+|++++++++.+ ++++|++++|+|| ...+ +++|.++|++||+++|+|++++ .+.+.+....+
T Consensus 146 ~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~ 223 (399)
T PRK07681 146 LKKENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYA-EFYFDGNKPISFLS 223 (399)
T ss_pred cCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccch-hheeCCCCCCChhh
Confidence 4433 357899999988854 7899988888887 3444 7889999999999999999954 44432211111
Q ss_pred CC---cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHh
Q 018318 232 FE---YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA 306 (358)
Q Consensus 232 ~~---~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~ 306 (358)
+. ...+++.|++|.+ +|.|.|++++++ ++.+.+......... +.+.....+...++...
T Consensus 224 ~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~---------------~l~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~ 287 (399)
T PRK07681 224 VPGAKEVGVEINSLSKSYSLAGSRIGYMIGNE---------------EIVRALTQFKSNTDY-GVFLPIQKAACAALRNG 287 (399)
T ss_pred CCCCcccEEEEeecccccCCccceeEEEecCH---------------HHHHHHHHHHhhccc-CCCHHHHHHHHHHHhCc
Confidence 11 2347889999987 566789999876 344444432211111 12222222223333221
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 307 STPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
...++...+++.++++++.+.|++.|+++.. +..+..+|+++.
T Consensus 288 -~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-p~~g~f~~~~l~ 330 (399)
T PRK07681 288 -AAFCEKNRGIYQERRDTLVDGFRTFGWNVDK-PAGSMFVWAEIP 330 (399)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCeeeEEEEECC
Confidence 1223555667788889999999999987654 456888999975
No 125
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.84 E-value=1e-19 Score=172.24 Aligned_cols=215 Identities=20% Similarity=0.225 Sum_probs=151.4
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+...+|| +++++++|.+. .++++||+.|+..++.+++++||+|++..+.|++..... . ..+...
T Consensus 38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~--~---~~~~~~ 103 (369)
T cd00614 38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLF--E---RLLPKL 103 (369)
T ss_pred CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHH--H---HHHhhc
Confidence 456777888 78999999865 377899999999999999999999999998876543110 0 011233
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|. ++..++. .|++++++++++ ++++|++++++++ ...|+++|+++||+||+++++|++|+.+..
T Consensus 104 g~--~~~~v~~------~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~----- 169 (369)
T cd00614 104 GI--EVTFVDP------DDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL----- 169 (369)
T ss_pred Ce--EEEEeCC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----
Confidence 43 4444432 358999999865 7899988877665 567999999999999999999999877643
Q ss_pred CCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
..+++ ++|++++|++|+++|+ .||+++++++ ++.+++...... .|....+ +. .+.+++
T Consensus 170 ~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~--------------~l~~~l~~~~~~--~g~~~~p-~~-a~~~l~ 231 (369)
T cd00614 170 QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE--------------ALIQRLRFLRLA--LGTILSP-FD-AWLLLR 231 (369)
T ss_pred CChhhhCCcEEEeccceeccCCCCceEEEEEeCcH--------------HHHHHHHHHHHh--hCCCCCH-HH-HHHHHc
Confidence 13445 8999999999999764 4799998773 344444432111 1111112 11 122333
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
.+ +.+..+++++.+|++++.++|++++
T Consensus 232 ~l--~tl~~r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 232 GL--KTLPLRMERHSENALKVAEFLEKHP 258 (369)
T ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33 2356778999999999999999884
No 126
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.84 E-value=6.5e-19 Score=167.92 Aligned_cols=263 Identities=19% Similarity=0.184 Sum_probs=168.9
Q ss_pred cceeEeccC--CC-CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChH
Q 018318 32 RGIELIASE--NF-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (358)
Q Consensus 32 ~~~~l~a~~--~~-~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~ 108 (358)
+.+.+..+. .. .+|.+.+++.+.+.. ++..+...++..|.. .+.+.+++++++++|.+. .+++++|++
T Consensus 34 ~~id~~~~~~~g~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~g~~---~l~~~l~~~l~~~~g~~~-----~i~~~sG~~ 104 (385)
T TIGR01825 34 EVINLSSNNYLGFADHPRLKEAAAQAIQQ-YGVGAGAVRTIAGTL---RLHEELEEKLAKFKKTEA-----ALVFQSGFN 104 (385)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-cCCCCCccCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECcHHH
Confidence 446666542 44 588998988877642 222222111222321 223344588999999754 366789998
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc---CCcEE
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---RPKLI 185 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~---~~~~v 185 (358)
++..++.++++|||.|++..+.|+++.. .+...+.. ...+ ..+|++++++.+++. ++++|
T Consensus 105 a~~~a~~~~~~~gd~vi~~~~~~~~~~~---------~~~~~g~~--~~~~------~~~d~~~l~~~l~~~~~~~~~~v 167 (385)
T TIGR01825 105 TNQGVLSALLRKGDIVLSDELNHASIID---------GLRLTKAT--KKIY------KHADMDDLDRVLRENPSYGKKLI 167 (385)
T ss_pred HHHHHHHHhCCCCCEEEEEccccHHHHH---------HHHhcCCc--eEEe------CCCCHHHHHHHHHhhccCCCeEE
Confidence 9888888889999999998887765431 12233432 2222 258899999888653 46777
Q ss_pred EEcCCCC--CCccchHHHHHHHHHhCCEEEEechhhhhhhhc-cc--c-CCCCC-cccEEEecCCccCCCCCeeEEEEeC
Q 018318 186 ICGGSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE--A-ANPFE-YCHIVTTTTHKSLRGPRAGMIFYRK 258 (358)
Q Consensus 186 ~~~~~~~--~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~-~~--~-~~~~~-~~d~~~~s~~K~l~g~~gG~i~~~~ 258 (358)
+++...+ |...|+++|.++|++||+++|+|++|+.|.... +. . ...+. +.|+++.|++|++ |..||+++.++
T Consensus 168 ~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~~ 246 (385)
T TIGR01825 168 VTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGHK 246 (385)
T ss_pred EEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecCH
Confidence 7765433 456799999999999999999999987664321 10 0 01223 6789999999998 45678888766
Q ss_pred CCCCCCCCCCCCccccHHHHhhhhcCCCCcCC-CChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceee
Q 018318 259 GPKPPKKGQPEGAVYDFEDKINFAVFPSLQGG-PHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (358)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~ 337 (358)
++.+.+.....++..++ ......+++.++++.+.. ..+..++..++++++.+.|++.|+++.
T Consensus 247 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~ 309 (385)
T TIGR01825 247 ---------------ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDTG 309 (385)
T ss_pred ---------------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 34444443222222222 233445555666665432 134567778889999999999898876
Q ss_pred e
Q 018318 338 T 338 (358)
Q Consensus 338 ~ 338 (358)
.
T Consensus 310 ~ 310 (385)
T TIGR01825 310 G 310 (385)
T ss_pred C
Confidence 4
No 127
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.2e-19 Score=173.95 Aligned_cols=192 Identities=18% Similarity=0.110 Sum_probs=134.4
Q ss_pred EeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHH
Q 018318 36 LIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT 115 (358)
Q Consensus 36 l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~ 115 (358)
+..+.++..+.+.+++......+ .++.+++. +.+.++.+| ++++++.|++. .+.++||+.|+.+++.
T Consensus 36 i~~sstf~~~~~~~~~~~~~~~~--~~~~Y~r~--~~pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~al~ 102 (437)
T PRK05613 36 IYQTTSYVFDSAEHAKQRFALED--LGPIYSRL--TNPTVEALE----NRIASLEGGVH-----AVAFASGQAAETAAIL 102 (437)
T ss_pred EeCCCCcccCCHHHHHHhhcccc--CCceeeCc--cChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHH
Confidence 34455666556655543222111 13444443 456777787 78999999865 4789999999999999
Q ss_pred hhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--
Q 018318 116 AVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP-- 193 (358)
Q Consensus 116 a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~-- 193 (358)
+++++||+|+++..+|++..... . ..+...|+ ++.+++ + ..|++++++++.+ ++++|++.++.++
T Consensus 103 ~ll~~Gd~VI~~~~~y~~t~~~~--~---~~l~~~Gi--~v~~vd-~----~~d~e~l~~~l~~-~tk~V~~e~~~Np~~ 169 (437)
T PRK05613 103 NLAGAGDHIVTSPRLYGGTETLF--L---VTLNRLGI--EVTFVE-N----PDDPESWQAAVQP-NTKAFFGETFANPQA 169 (437)
T ss_pred HhcCCCCEEEECCCccHHHHHHH--H---HHHHhcCe--EEEEEC-C----CCCHHHHHHhCCc-cCeEEEEECCCCCCC
Confidence 98999999999998888653111 0 01223454 445553 2 1389999999975 6888877666554
Q ss_pred CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeC
Q 018318 194 RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRK 258 (358)
Q Consensus 194 ~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~ 258 (358)
.+.|+++|+++||++|+++++|++|+.|... .+++ ++|++++|+||+++|.. ||+++.++
T Consensus 170 ~v~di~~I~~la~~~gi~livD~t~a~g~~~-----~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 170 DVLDIPAVAEVAHRNQVPLIVDNTIATAALV-----RPLELGADVVVASLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred cccCHHHHHHHHHHcCCeEEEECCCcccccc-----ChHHhCCCEEEeeccceecCCCcceeEEEEecC
Confidence 5789999999999999999999999876532 3445 89999999999987652 57676543
No 128
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.84 E-value=2.5e-20 Score=175.57 Aligned_cols=267 Identities=15% Similarity=0.112 Sum_probs=165.9
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCC-CCCCC---chhHHHHHHHHHHHHHHhcCCCCCCCCccccccC-ChH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGG---NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYS-GSP 108 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~-~~~~~---~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~s-Gt~ 108 (358)
+.|.|++..+|+.|++|+..++.. ++ +++. .+..+ .++.+.++ ++|+.+++++|++.++ ..+++++ ||.
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~-~~r~~l~~l~~~~~~~--~vvf~~gs~T~ 74 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVN-EAESDLRELLNIPDNY--KVLFLQGGATG 74 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc--eEEEEcCCchH
Confidence 357899999999999999988743 21 1111 11122 34555564 7899999999984322 1244444 788
Q ss_pred HHHHHHHhhcC---CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCC-CCC-HHHHHHHHhhcCCc
Q 018318 109 ANFAAYTAVLE---PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG-YID-YDKLEEKALDFRPK 183 (358)
Q Consensus 109 a~~~~l~a~~~---~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~id-~~~l~~~l~~~~~~ 183 (358)
++.+++.++++ +||.|++-.. .+.+. ..++..|..+..+.. +. ++ ..+ ++..+..+. .+++
T Consensus 75 a~~~~~~~l~~~~~~~~~i~~g~~------~~~~~----~~a~~~g~~~~~~~~--~~-~g~~~~~~~~~~~~~~-~~~~ 140 (355)
T cd00611 75 QFAAVPLNLLGDKGTADYVVTGAW------SAKAA----KEAKRYGGVVVIVAA--KE-EGKYTKIPDVETWDLA-PDAA 140 (355)
T ss_pred HHHHHHHhcCCCCCeEEEEECCHH------HHHHH----HHHHhcCCCcEEEec--cc-ccCCCCCCCHhhcCCC-CCCC
Confidence 99999999977 4444443221 11100 011334554444433 31 22 224 222223343 4789
Q ss_pred EEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeCCCCC
Q 018318 184 LIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP 262 (358)
Q Consensus 184 ~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~ 262 (358)
+|++++.++.+=..+. ++++.||++++||++|++|.. +.+++..|++++|.||++ ||+| |+++.+++..+
T Consensus 141 lV~~~h~~t~tG~~~~---~i~~~~g~~~~VDa~qs~g~~-----~idv~~~~~~~ss~~K~l-GP~G~g~l~~~~~~~~ 211 (355)
T cd00611 141 YVHYCSNETIHGVEFD---EVPDTGGVPLVADMSSNILSR-----PIDVSKFGVIYAGAQKNL-GPAGVTVVIVRKDLLG 211 (355)
T ss_pred EEEEeCCcccccEEcc---eecccCCCeEEEEccccccCC-----CCCHHHhCEEEeeccccc-CCCceEEEEECHHHHh
Confidence 8877765554211123 455669999999999998864 234445567777799976 7998 99998875422
Q ss_pred -CCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHhhC-Cc
Q 018318 263 -PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGK-GY 334 (358)
Q Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-G~ 334 (358)
+.+..+... ++...... .+ ..++|+.+.+.++.+|++.+... +++.+.++.++++++++++|+++ |+
T Consensus 212 ~~~~~~~~~~--~~~~~~~~--~~-~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl 281 (355)
T cd00611 212 KARKITPSML--NYKTHADN--NS-LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF 281 (355)
T ss_pred hcccCCCCcc--cHHHHHhc--CC-CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 222111110 12111111 11 24678889999999999998766 58999999999999999999998 86
No 129
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.1e-19 Score=173.16 Aligned_cols=214 Identities=19% Similarity=0.236 Sum_probs=150.0
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+....+| +++++++|.+. .+.++||+.|+..++.+++++||+|++..+.|++..... . ..+...
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~--~---~~~~~~ 127 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIF--T---EFLPRM 127 (398)
T ss_pred CChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHH--H---HHHhhC
Confidence 456677787 78999999875 377899999999999999999999999998887532110 0 012234
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+ ++..++ ..|++++++++++ ++++|+++.++|+ ...|+++|.++|+++|+++|+|++|+.+...
T Consensus 128 Gi--~v~~vd------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~---- 194 (398)
T PRK08249 128 GV--DVTLCE------TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQ---- 194 (398)
T ss_pred Ce--EEEEcC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccC----
Confidence 43 334332 3689999999975 7899998887776 5679999999999999999999998754321
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
.++. ++|++++|++|+++|+. ||+++.++ ++.+.+...... .+....+..+ +.+++
T Consensus 195 -~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~---------------~l~~~l~~~~~~--~g~~~s~~~a--~l~l~ 254 (398)
T PRK08249 195 -NPLALGADLVIHSATKFLSGHADALGGVVCGSK---------------ELMEQVYHYREI--NGATMDPMSA--YLILR 254 (398)
T ss_pred -CchhhCCCEEeccCceecCCCCCceEEEEECCH---------------HHHHHHHHHHHh--cCCCCCHHHH--HHHHh
Confidence 2334 89999999999997643 57777654 344444332211 1212222222 22333
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
.+ +.+..++++..+|++++.++|+++.
T Consensus 255 ~l--~tL~~R~~~~~~na~~la~~L~~~p 281 (398)
T PRK08249 255 GM--KTLKLRVRQQQESAMALAKYLQTHP 281 (398)
T ss_pred Cc--chHHHHHHHHHHHHHHHHHHHHcCC
Confidence 32 3466788999999999999999873
No 130
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.9e-18 Score=164.67 Aligned_cols=309 Identities=13% Similarity=0.081 Sum_probs=183.6
Q ss_pred chhhcccccccchHHHHHHHHHHHHhhcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHH
Q 018318 5 NEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLC 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~ 82 (358)
|...++++.......+..+.+........+.|..++.. +++.+++++........ ..|+.. .....+.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~~------~G~~~lr~~i 75 (384)
T PRK06348 3 NKFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-TRYTDS------GGDVELIEEI 75 (384)
T ss_pred chHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC------CCcHHHHHHH
Confidence 33345555555555555554443333345666655433 25677665544332221 123221 1223455555
Q ss_pred HHHHHHhcCC--CCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeec
Q 018318 83 RSRALQTFHL--DPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY 159 (358)
Q Consensus 83 ~~~la~~~g~--~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (358)
.+++.+.+|. +++ .|+.++| ++|+..++.++++|||+|++..|.|..+.. .+...|.. ++++
T Consensus 76 a~~~~~~~~~~~~~~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~---------~~~~~g~~--~~~~ 140 (384)
T PRK06348 76 IKYYSKNYDLSFKRN----EIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD---------QIEMVGGK--PIIL 140 (384)
T ss_pred HHHHHHHhCCCCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH---------HHHHcCCE--EEEe
Confidence 5666655554 443 3445555 569999999999999999999998875431 23345543 3444
Q ss_pred ccC-CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCC--C
Q 018318 160 KVN-SSTGYIDYDKLEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--P 231 (358)
Q Consensus 160 ~~~-~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~--~ 231 (358)
+.+ .+++.+|++++++++++ ++++|++++++||+ .. .+++|.++|++||+++|+|+++ .++.+.+.... .
T Consensus 141 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~ 218 (384)
T PRK06348 141 ETYEEDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVY-DGFSFYEDFVPMAT 218 (384)
T ss_pred cCCcCcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEeccc-ccceeCCCccchhh
Confidence 432 23457999999998864 78888888888773 33 4788999999999999999994 34443321111 1
Q ss_pred CC---cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHh
Q 018318 232 FE---YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA 306 (358)
Q Consensus 232 ~~---~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~ 306 (358)
+. ...+++.|++|.+ +|.|.|++++++ ++.+.+.........+ .+.....++..++..
T Consensus 219 ~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~---------------~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~- 281 (384)
T PRK06348 219 LAGMPERTITFGSFSKDFAMTGWRIGYVIAPD---------------YIIETAKIINEGICFS-APTISQRAAIYALKH- 281 (384)
T ss_pred cCCCcCcEEEEecchhccCCccccceeeecCH---------------HHHHHHHHHHHhccCC-CCHHHHHHHHHHHhC-
Confidence 11 2347889999986 477889999977 3444444322111111 122222222333322
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcCCCCC
Q 018318 307 STPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLGL 355 (358)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~~~~~ 355 (358)
.+...++.++...++++++.+.|+.. |+++.. +..+..+|+++...++
T Consensus 282 ~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~-p~gg~~~~~~~~~~~~ 330 (384)
T PRK06348 282 RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHP-PKGSIYAFINIKKTGL 330 (384)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecc-CCeeEEEEEecccCCC
Confidence 11123456666777788899999876 666654 4577889998764333
No 131
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.84 E-value=1.9e-18 Score=164.91 Aligned_cols=304 Identities=17% Similarity=0.141 Sum_probs=184.5
Q ss_pred cccccccchHHHHHHHHHHHH----hhcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRR----QCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLC 82 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~ 82 (358)
++++..+.......+.+.++. ..+.+.|..+++. +++.+.+++.+.+......+|+.. .| ..+|.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~G---~~~lr~ai 77 (388)
T PRK07366 4 AQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLF---HG---TLDFREAA 77 (388)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCC---CC---CHHHHHHH
Confidence 345555555544433333222 2345677666543 378888888766532211123221 12 23454455
Q ss_pred HHHHHHhcCC--CCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeec
Q 018318 83 RSRALQTFHL--DPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY 159 (358)
Q Consensus 83 ~~~la~~~g~--~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (358)
.+++.+.+|. ++++ .|+.++|+ +|+..++.++++|||+|++..|.|..+.. .++..|..+. ++
T Consensus 78 a~~~~~~~g~~~~~~~---~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g~~~~--~v 143 (388)
T PRK07366 78 AQWYEQRFGLAVDPET---EVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAG---------GVYLAGGQIY--PM 143 (388)
T ss_pred HHHHHHhhCCcCCCcC---eEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcCCEEE--EE
Confidence 5666666564 3321 25566665 69999999999999999999998875431 2345666544 44
Q ss_pred ccCCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhcccc-CCCC
Q 018318 160 KVNSS-TGYIDYDKLEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEA-ANPF 232 (358)
Q Consensus 160 ~~~~~-~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-~~~~ 232 (358)
+.+.+ .+.+|++++++.+.+ +++++++++++||+ .. .+++|.++|++||+++|+|+++ ..+.+.+.. ...+
T Consensus 144 ~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~ 221 (388)
T PRK07366 144 PLRAENDFLPVFADIPTEVLA-QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPY-VDLVFDGEVEPPSI 221 (388)
T ss_pred ECCCccCCCCCHHHHHHhhcc-cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecch-hhcccCCCCCCCCh
Confidence 44433 357899999887754 68999888888873 32 4678888999999999999994 344433221 1111
Q ss_pred ---C-c--ccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 233 ---E-Y--CHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 233 ---~-~--~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
+ . .-+++.|++|++ +|.|.|++++++ ++.+.+.........+. ......+..+++.
T Consensus 222 ~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~---------------~li~~l~~~~~~~~~~~-~~~~~~~a~~~l~ 285 (388)
T PRK07366 222 LQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNA---------------QLIQALRQVKAVVDFNQ-YRGILNGAIAALT 285 (388)
T ss_pred hhCCCCcccEEEEeecccccCCcchhheehcCCH---------------HHHHHHHHHHhhcccCC-CHHHHHHHHHHHh
Confidence 1 1 236789999986 577889999877 35554443222111111 1111122223332
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
. ....++..+++++++++++.+.|++.|+.+.. +..+..+|+++..
T Consensus 286 ~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~~~~ 331 (388)
T PRK07366 286 G-PQATVQQTVQIFRQRRDAFINALHQIGWPVPL-PEATMYVWAKLPE 331 (388)
T ss_pred C-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCeeEEEEEECCc
Confidence 1 11234677788888999999999988886543 5678889999754
No 132
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.83 E-value=2.3e-18 Score=163.96 Aligned_cols=282 Identities=16% Similarity=0.118 Sum_probs=168.5
Q ss_pred cceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHH
Q 018318 32 RGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA 109 (358)
Q Consensus 32 ~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a 109 (358)
..+.|..+++ .+++.+.+++.+.+.......|+. .....++ |+++++++|+++++ .++++++++|
T Consensus 29 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~l----r~~ia~~l~~~~~~---v~~~~g~t~a 95 (380)
T PRK06225 29 EMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPP------PEGFPEL----RELILKDLGLDDDE---ALITAGATES 95 (380)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC------CcchHHH----HHHHHHhcCCCCCc---EEEeCCHHHH
Confidence 4455665555 347899999887765322112221 1223334 48899999998742 2444555679
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
+..++.+++++||+|+++.|.|..+. ..+...|+.+..++++.+..++.+|++++++++.+ ++++|++++
T Consensus 96 l~~~~~~~~~~gd~vl~~~p~y~~~~---------~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~ 165 (380)
T PRK06225 96 LYLVMRAFLSPGDNAVTPDPGYLIID---------NFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE-NTRLIYLID 165 (380)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcchH---------HHHHHhCceEEeeccccccCCccCCHHHHHhhcCC-CceEEEEeC
Confidence 99999999999999999998765321 12234565443333321112357999999998865 688888777
Q ss_pred CCCC--Cc---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccCC--CCCeeEEEEeCCCC
Q 018318 190 SAYP--RD---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLR--GPRAGMIFYRKGPK 261 (358)
Q Consensus 190 ~~~~--~~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~--g~~gG~i~~~~~~~ 261 (358)
++|| .. .++++|.++|+++|+++|+|+++. ++.........+. ...+++.|++|+++ |.+.|++++++
T Consensus 166 p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~--- 241 (380)
T PRK06225 166 PLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR-DFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATP--- 241 (380)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH-HHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCH---
Confidence 7765 22 358999999999999999999853 3322110001112 34577889999873 55679999876
Q ss_pred CCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCC
Q 018318 262 PPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGG 340 (358)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~ 340 (358)
++.+.+....... . +.+....++...++... ....++..+...++++.+.+.|++. |+.+...+
T Consensus 242 ------------~l~~~~~~~~~~~-~-~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 306 (380)
T PRK06225 242 ------------DLIEVVKSIVIND-L-GTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYP 306 (380)
T ss_pred ------------HHHHHHHHHHhcc-c-CCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCC
Confidence 3444444321111 1 12222222222333221 1122444455666778888888874 65432223
Q ss_pred CcceEEEEEcCCCCC
Q 018318 341 TENHLVLWDLRPLGL 355 (358)
Q Consensus 341 ~~~~~~~v~~~~~~~ 355 (358)
..+..+|+++...++
T Consensus 307 ~~g~~~~~~~~~~~~ 321 (380)
T PRK06225 307 SHGNMMVIDISEAGI 321 (380)
T ss_pred CCCeEEEEEcccccC
Confidence 456678998865444
No 133
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.83 E-value=3.8e-18 Score=162.82 Aligned_cols=302 Identities=15% Similarity=0.072 Sum_probs=183.6
Q ss_pred cccccchHHHHHHHHHHHHhhcceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 018318 11 SLETVDPEIHDLIEKEKRRQCRGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQ 88 (358)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~ 88 (358)
++..+....+..+.+...+....+.|..+.+ .+++.+.+|+.+.+.......|... .| ...+.+.+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~---~G---~~~lr~~~~~~l~~ 80 (389)
T PRK05957 7 RMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAV---QG---IPPLLEAITQKLQQ 80 (389)
T ss_pred HHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC---CC---CHHHHHHHHHHHHH
Confidence 3444445455555554444444567776544 3578899998776532211123221 12 22344556688888
Q ss_pred hcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCC
Q 018318 89 TFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGY 167 (358)
Q Consensus 89 ~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (358)
.+|...+.. ..+++++|+ .++..++.+++++||+|++.+|.|..+.. .+...|+. ++.++.+ +++.
T Consensus 81 ~~g~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g~~--~~~v~~~-~~~~ 147 (389)
T PRK05957 81 DNGIELNNE-QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM---------AITMAGCQ--PILVPTD-DNYQ 147 (389)
T ss_pred HhCCCCCCC-CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH---------HHHhcCCE--EEEeecC-CCCC
Confidence 889742100 135556664 68888888889999999999988765431 12345654 4444444 3568
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCC--C-C--ccc
Q 018318 168 IDYDKLEEKALDFRPKLIICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQE-AANP--F-E--YCH 236 (358)
Q Consensus 168 id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~--~-~--~~d 236 (358)
+|++++++++++ ++++|++++++|| ...+ +++|+++|+++|+++++|+++. .+.+.+. .... + + .-.
T Consensus 148 ~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~ 225 (389)
T PRK05957 148 LQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYE-YFTYDGVKHFSPGSIPGSGNHT 225 (389)
T ss_pred cCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccch-hccCCCCCccChhhCCCccCcE
Confidence 999999999864 7899888878776 3444 8899999999999999999954 4433221 1111 1 1 234
Q ss_pred EEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHH
Q 018318 237 IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAY 314 (358)
Q Consensus 237 ~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~ 314 (358)
+++.|++|.+ +|.|.|++++++ ++.+.+.........+ ++.....++..++.. ....+++.
T Consensus 226 i~~~S~SK~~g~~GlRiG~~~~~~---------------~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~-~~~~~~~~ 288 (389)
T PRK05957 226 ISLYSLSKAYGFASWRIGYMVIPI---------------HLLEAIKKIQDTILIC-PPVVSQYAALGALQV-GKSYCQQH 288 (389)
T ss_pred EEEecchhhccCccceeEEEecCH---------------HHHHHHHHHHhhcccC-CCcHHHHHHHHHHhC-ChHHHHHH
Confidence 7889999986 466789999876 3555554332211111 121222221222221 11124666
Q ss_pred HHHHHHHHHHHHHHHhhC-Cc-eeeeCCCcceEEEEEcC
Q 018318 315 AKQVKANAVALGNYLTGK-GY-SLVTGGTENHLVLWDLR 351 (358)
Q Consensus 315 ~~~~~~~~~~l~~~L~~~-G~-~~~~~~~~~~~~~v~~~ 351 (358)
.+++.++++++.+.|++. |+ .+.. +..+..+|+.+.
T Consensus 289 ~~~~~~~r~~l~~~L~~~~~~~~~~~-~~gg~~~~~~~~ 326 (389)
T PRK05957 289 LPEIAQVRQILLKSLGQLQDRCTLHP-ANGAFYCFLKVN 326 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccC-CCeeEEEEEeCC
Confidence 777888999999999886 53 4443 456778999874
No 134
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.83 E-value=4.3e-18 Score=162.29 Aligned_cols=280 Identities=15% Similarity=0.062 Sum_probs=172.6
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC--CCCCCccccccCC-
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PTQWGVNVQPYSG- 106 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~--~~~~~~~v~~~sG- 106 (358)
+.+.+..+++. +++.+.+++.+.+.......|+.. ....++.+.+.+++.+.+|.+ +++ .|++++|
T Consensus 32 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lr~aia~~~~~~~g~~~~~~~---~ii~t~G~ 102 (385)
T PRK09276 32 DVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSY------EGMLEFRKAVADWYKRRFGVELDPET---EVISLIGS 102 (385)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC------CCcHHHHHHHHHHHHHHhCCCCCCCC---cEEEccCc
Confidence 45667665543 477888888766532211123221 122345445556666666653 321 2555666
Q ss_pred hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhcCCcEE
Q 018318 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLI 185 (358)
Q Consensus 107 t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v 185 (358)
++++..++.++++|||+|+++.|.|..+.. ..+..|..+..+ +.+.+ ++.+|++++++.+.+ ++++|
T Consensus 103 ~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~---------~~~~~g~~~~~v--~~~~~~g~~~d~~~l~~~~~~-~~~~v 170 (385)
T PRK09276 103 KEGIAHIPLAFVNPGDVVLVPDPGYPVYKI---------GTIFAGGEPYFM--PLKEENGFLPDLDAIPEDVAK-KAKLM 170 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcChHH---------HHHHcCCEEEEE--ecCCCCCCcCCHHHHHHhccc-cceEE
Confidence 469999999999999999999998765321 223456544444 44323 356899999888764 78999
Q ss_pred EEcCCCCCC--ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCC---CC---cccEEEecCCccC--CCCCee
Q 018318 186 ICGGSAYPR--DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FE---YCHIVTTTTHKSL--RGPRAG 252 (358)
Q Consensus 186 ~~~~~~~~~--~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~---~~---~~d~~~~s~~K~l--~g~~gG 252 (358)
++++++||+ ..+ +++|+++|++||+++|+|+++. .+.+.+....+ +. ...+++.|++|.+ +|.|.|
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 249 (385)
T PRK09276 171 FINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYS-EIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIG 249 (385)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchh-heecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhhe
Confidence 888888773 334 6899999999999999999964 33322111111 11 2347889999987 456679
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+++++++ +.+.+....... ..+.+.....+...++.. ....++...+++.++++++.+.|++.
T Consensus 250 ~~i~~~~---------------l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (385)
T PRK09276 250 FAVGNAD---------------LIAGLGKVKSNV-DSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL 312 (385)
T ss_pred eeeCCHH---------------HHHHHHHHHhhc-cCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9998773 444444322111 111222222222233321 11223566777888899999999998
Q ss_pred CceeeeCCCcceEEEEEcC
Q 018318 333 GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 333 G~~~~~~~~~~~~~~v~~~ 351 (358)
|+++.. +..+..+|+++.
T Consensus 313 ~~~~~~-~~~~~~~~v~~~ 330 (385)
T PRK09276 313 GLEVEP-PKATFYVWAPVP 330 (385)
T ss_pred CCcccC-CCcceEEEEECC
Confidence 988765 456777899875
No 135
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=1.4e-19 Score=172.13 Aligned_cols=221 Identities=16% Similarity=0.114 Sum_probs=153.6
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++.++++ +.+.+.+|| +.+++++|.+. .++++||++|+..++.++++|||+|+++.+.|++......
T Consensus 56 ~~~Y~r~--~~pt~~~Le----~~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~-- 122 (394)
T PRK07050 56 QWRYGLH--ATPTSLALA----QRLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE-- 122 (394)
T ss_pred CcccCCC--CCHHHHHHH----HHHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH--
Confidence 3445554 557777887 78999999765 3667888999999999999999999999998876431110
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
......|+ ++.+++. .+.+++++++++ ++++|++++++|+ ...|+++|+++|+++|+++++|++|+
T Consensus 123 ---~~~~~~Gi--~v~~vd~------~~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a 190 (394)
T PRK07050 123 ---WLARDFGI--TVRFYDP------LIGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYS 190 (394)
T ss_pred ---HHHHhcCe--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcc
Confidence 01223454 4444432 245788888864 7899999888876 46789999999999999999999988
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.|... .++. ++|+++.|++|++.|. .||++++.++ ++.+++....... |... ..
T Consensus 191 ~~~~~-----~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~--------------~~~~~~~~~~~~~--G~~~-~~ 248 (394)
T PRK07050 191 AGLAF-----KPFEHGVDISVQALTKYQSGGSDVLMGATITADA--------------ELHAKLKLARMRL--GIGV-SA 248 (394)
T ss_pred ccccc-----CHHHcCCeEEEEECCceecCCCCeeEEEEEECCH--------------HHHHHHHHHHHhc--CCCC-CH
Confidence 77542 3344 8999999999998653 3788887664 4555444322111 1111 11
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
..+ ..+++-+ +.+..++++..+++.++.++|+++
T Consensus 249 ~~a-~l~lr~l--~tl~~Rl~~~~~~a~~la~~L~~~ 282 (394)
T PRK07050 249 DDC-SLVLRGL--PSLQVRLAAHDRSALEVAEWLKAR 282 (394)
T ss_pred HHH-HHHHcCC--CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 122 2333322 246678899999999999999987
No 136
>PRK04311 selenocysteine synthase; Provisional
Probab=99.83 E-value=1.3e-18 Score=167.41 Aligned_cols=255 Identities=15% Similarity=0.134 Sum_probs=156.7
Q ss_pred ccCCCCCHHHHHHHhcccccCCCC-CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHh
Q 018318 38 ASENFTSFAVIEALGSALTNKYSE-GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (358)
Q Consensus 38 a~~~~~~~~V~~a~~~~~~~~~~~-g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a 116 (358)
.+-..+++++++++.+.+.. +.. .+.......| +..+.+| +.+++++|++. .++++||+.|+..++.+
T Consensus 93 lg~s~l~~~v~eav~~~~~~-~~~le~~l~~g~~g-~r~~~~e----~~lA~l~Gae~-----a~vv~sgtaAl~l~l~~ 161 (464)
T PRK04311 93 LGRALLSEAAIEAVTEAARG-YSNLEYDLATGKRG-SRDRALA----ALLCALTGAED-----ALVVNNNAAAVLLALNA 161 (464)
T ss_pred CCCCCCCHHHHHHHHHHHhc-ccccccchhhcccc-hHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHH
Confidence 34567799999999877643 321 1100000011 2233444 88999999986 36688899999888855
Q ss_pred hcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC---
Q 018318 117 VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--- 193 (358)
Q Consensus 117 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--- 193 (358)
+.+||+|+++..++...-.... .. ..+...|+ +++.++.+ ...+++++++++.+ ++++|++.+++|+
T Consensus 162 -l~~GdeVIvs~~e~~~~ggs~~-i~--~~~~~~G~--~l~~v~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 162 -LAAGKEVIVSRGELVEIGGAFR-IP--DVMRQAGA--RLVEVGTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRIE 231 (464)
T ss_pred -hCCCCEEEEcchhhhhcCcchh-hH--HHHHHCCc--EEEEECCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCcccc
Confidence 6899999998765431100000 00 01233454 44455432 34679999999975 6888876655432
Q ss_pred ---CccchHHHHHHHHHhCCEEEEechhhhhhhh---------ccccCCCCC-cccEEEecCCccCCCCCeeEEEEeCCC
Q 018318 194 ---RDWDYARFRAVADKCGALLLCDMAHISGLVA---------AQEAANPFE-YCHIVTTTTHKSLRGPRAGMIFYRKGP 260 (358)
Q Consensus 194 ---~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~---------~~~~~~~~~-~~d~~~~s~~K~l~g~~gG~i~~~~~~ 260 (358)
...|+++|+++||+||+++++|+++ |... .+....+++ ++|++++|+||+++||++|+++++++
T Consensus 232 G~~~~~dl~eI~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~- 308 (464)
T PRK04311 232 GFTKEVSLAELAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKE- 308 (464)
T ss_pred ccCCcCCHHHHHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHH-
Confidence 4579999999999999999999953 3221 111112233 89999999999999999999999874
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCCCCcC-CCChhHHHHHHHHHHHhccH--------H---HHHHHHHHHHHHHHHHHH
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQG-GPHNHQIGALAVALKQASTP--------A---FKAYAKQVKANAVALGNY 328 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~al~~~~~~--------~---~~~~~~~~~~~~~~l~~~ 328 (358)
+.++++.. +.... ...-..++++.+.+..+... . +....+++.++++.+.++
T Consensus 309 --------------li~~l~~~--~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~ 372 (464)
T PRK04311 309 --------------LIARLKKH--PLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAA 372 (464)
T ss_pred --------------HHHHHhhc--hhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHH
Confidence 44434321 00000 00112344555555533221 0 223457788899999999
Q ss_pred HhhC
Q 018318 329 LTGK 332 (358)
Q Consensus 329 L~~~ 332 (358)
|+.+
T Consensus 373 L~~~ 376 (464)
T PRK04311 373 LKAA 376 (464)
T ss_pred HHhc
Confidence 9875
No 137
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.83 E-value=5.5e-19 Score=166.98 Aligned_cols=224 Identities=17% Similarity=0.188 Sum_probs=152.5
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++.++|+ +.+....|| +.+++++|++. .+.++||+.|+..++ +++++||+|++..+.|++.+... .
T Consensus 43 ~~~y~r~--~~pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~--~ 108 (366)
T PRK08247 43 GFDYSRT--GNPTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLF--E 108 (366)
T ss_pred CccccCC--CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHH--H
Confidence 3555554 456677888 78999999986 377889999888765 57899999999998887643111 0
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--ccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR--DWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
..+...|+ ++..++ ..|++++++++++ ++++|++++|+||. ..++++|+++|++||+++|+|++++
T Consensus 109 ---~~~~~~G~--~v~~vd------~~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~ 176 (366)
T PRK08247 109 ---EHWKKWNV--RFVYVN------TASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFY 176 (366)
T ss_pred ---HHhhccCc--eEEEEC------CCCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 01223454 344443 2589999999875 78999998888873 5689999999999999999999976
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.++.. .++. ++|++++|++|+++|+ .+|+++++++ ++.+.+....... ....+ +
T Consensus 177 ~~~~~-----~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~--------------~l~~~~~~~~~~~-g~~~s-~- 234 (366)
T PRK08247 177 TPVLQ-----RPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ--------------ELCERLAYYQNAA-GAVLS-P- 234 (366)
T ss_pred ccccc-----CchhcCCcEEEeecceeccCCCceeeeEEecChH--------------HHHHHHHHHHHhc-CCCCC-h-
Confidence 54332 2344 7999999999999775 5788887653 3444433221111 01111 1
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Ccee
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSL 336 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~ 336 (358)
.. ...+++.+ +.+..++++.+++++.+.++|+++ ++..
T Consensus 235 ~~-a~l~~~~l--~tl~~r~~~~~~~a~~l~~~L~~~p~v~~ 273 (366)
T PRK08247 235 FD-SWLLIRGM--KTLALRMRQHEENAKAIAAFLNEQPGVTD 273 (366)
T ss_pred HH-HHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeE
Confidence 11 12222222 234567778899999999999997 6754
No 138
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.83 E-value=6.2e-19 Score=164.99 Aligned_cols=248 Identities=17% Similarity=0.147 Sum_probs=155.7
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCe
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDR 123 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~ 123 (358)
+|.+.++..+.+. .|+ | ..+...++| +++++++|+++++ .+++++|++||..++.++++|||+
T Consensus 35 ~~~~~~~~~~~~~-~~~-g--------~~~~~~~Le----~~lA~~~g~~~e~---ilv~~gg~~a~~~~~~al~~~gd~ 97 (346)
T TIGR03576 35 GFKIDEEDLELLE-TYV-G--------PAIFEEKVQ----ELGREHLGGPEEK---ILVFNRTSSAILATILALEPPGRK 97 (346)
T ss_pred ChhHHHHHHHHHH-Hhc-C--------CHHHHHHHH----HHHHHHcCCCcce---EEEECCHHHHHHHHHHHhCCCCCE
Confidence 6788888776653 332 2 123444555 8899999996542 366677788999999999999999
Q ss_pred EEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC-CCCCc---cchH
Q 018318 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS-AYPRD---WDYA 199 (358)
Q Consensus 124 Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~-~~~~~---~~l~ 199 (358)
|+++.+....|.++. ..+++.|.. ++. ..|+++++. . .++++|+++.+ ..|.. .+++
T Consensus 98 Vli~~~d~p~~~s~~------~~~~l~ga~--~~~--------~~~l~~l~~-~--~~~~lIiitg~s~~G~v~~~~~L~ 158 (346)
T TIGR03576 98 VVHYLPEKPAHPSIP------RSCKLAGAE--YFE--------SDELSELKK-I--DGTSLVVITGSTMDLKVVSEEDLK 158 (346)
T ss_pred EEECCCCCCCchhHH------HHHHHcCCE--Eec--------cCCHHHHhh-C--cCceEEEEECCCCCCcccCHHHHH
Confidence 987544333332211 123445543 221 124555432 2 25677766433 23333 5899
Q ss_pred HHHHHHHHhCCEEEEechhhhhhhhc-cccCCCC-C-cccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHH
Q 018318 200 RFRAVADKCGALLLCDMAHISGLVAA-QEAANPF-E-YCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFE 276 (358)
Q Consensus 200 ~i~~la~~~g~~lvvD~a~~~g~~~~-~~~~~~~-~-~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~ 276 (358)
+|.++|+++|+++++|+||+.|.... +. .+. . ++|++++|++|+|+|+++|++++++ ++.
T Consensus 159 ~i~~la~~~~~~livDEAy~~~~~~~~~~--~~~~~~~~divv~s~SKalaG~r~G~v~~~~---------------~li 221 (346)
T TIGR03576 159 RVIKQAKSKEAIVLVDDASGARVRRLYGQ--PPALDLGADLVVTSTDKLMDGPRGGLLAGRK---------------ELV 221 (346)
T ss_pred HHHHHHHHcCCEEEEECCccccccccCCC--CCHHHcCCcEEEeccchhccccceEEEEeCH---------------HHH
Confidence 99999999999999999998764321 11 111 2 5789999999999899999999987 455
Q ss_pred HHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 277 DKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
+.+.....+...+ .+.+..++..++|+... .+...+.+.++++++++.+.+ +.+.. +++..+|+++..
T Consensus 222 ~~l~~~~~~~~~s-~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~--~~~~f~~~~~~~ 289 (346)
T TIGR03576 222 DKIKSVGEQFGLE-AQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVER--TPTGFVIKGVEE 289 (346)
T ss_pred HHHHHhhcCcccC-ccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCc--CCCeEEEEeCCC
Confidence 5555543333222 33344455455565432 245566777777778787774 55543 233358888753
No 139
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.83 E-value=1.3e-18 Score=169.91 Aligned_cols=280 Identities=13% Similarity=0.102 Sum_probs=166.3
Q ss_pred CCCCHHHHHHHhcccccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHH---H-
Q 018318 41 NFTSFAVIEALGSALTNKYSEGMP-GNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAY---T- 115 (358)
Q Consensus 41 ~~~~~~V~~a~~~~~~~~~~~g~~-~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l---~- 115 (358)
...+|.+.+++.+... +. ++. +.. ....+...++..++++++++++|++. +.+..++|+.+...++ .
T Consensus 80 ~~~~p~i~~~~~~~~~--~~-~~tpYq~-e~~sqG~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~~r~ 151 (481)
T PRK04366 80 MKYNPKINEKVARLPG--FA-ELHPLQP-EETVQGALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLMIRA 151 (481)
T ss_pred CCCCHHHHHHHHhCcc--hh-cCCCCCC-hhhhhHHHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHHHHH
Confidence 3458889888876521 11 221 100 00122334555667799999999975 3455566665444322 2
Q ss_pred hhcCCCC----eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 018318 116 AVLEPHD----RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA 191 (358)
Q Consensus 116 a~~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~ 191 (358)
.+.++|| +|+++.+.|+++.. .+...|..+. .++.+ .++.+|++++++++.+ ++++|++++++
T Consensus 152 ~~~~~Gd~~~~~Vlv~~~~hp~~~~---------~~~~~G~~vv--~v~~~-~~~~~D~e~L~~~i~~-~t~~V~v~~Pn 218 (481)
T PRK04366 152 YHEARGDTKRTEVIVPDSAHGTNPA---------SAAMAGFKVV--EIPSN-EDGLVDLEALKAAVGE-DTAALMLTNPN 218 (481)
T ss_pred HhhccCcCCCCEEEEcCCccHhHHH---------HHHHcCCEEE--EeecC-CCCCcCHHHHHhhccc-CCeEEEEeCCC
Confidence 2356776 99999988876542 2344665444 44444 3678999999999865 68888777666
Q ss_pred -CCCc-cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccCCCC------CeeEEEEeCCCCC
Q 018318 192 -YPRD-WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRGP------RAGMIFYRKGPKP 262 (358)
Q Consensus 192 -~~~~-~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~------~gG~i~~~~~~~~ 262 (358)
+|.. .|+++|+++||++|++++||+||..++.. .. .+-+ ++|++++++||||++| .+|++++++++.+
T Consensus 219 ~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g--~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~ 295 (481)
T PRK04366 219 TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILG--KA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAP 295 (481)
T ss_pred CccccchHHHHHHHHHHHcCCEEEEEecChhhhcc--cC-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHh
Confidence 3444 48999999999999999999999866432 11 2223 8999999999998644 3378888775432
Q ss_pred CCC------CCCCCccccH-HH-HhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCc
Q 018318 263 PKK------GQPEGAVYDF-ED-KINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (358)
Q Consensus 263 ~~~------~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~ 334 (358)
..+ .++... ..+ ++ .++. +.. ++.+...+.+.+..+..+..++++++.++..+++++|++.|++. +
T Consensus 296 ~lp~~~v~~~g~~~~-l~~~r~~~i~r--~~a--~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~ 369 (481)
T PRK04366 296 FLPVPVVEKDGDRYR-LDYDRPKSIGR--VRA--FYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-Y 369 (481)
T ss_pred hCCCCeeeccCCcee-ecccccccCCC--ccc--ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-C
Confidence 111 111100 001 00 1111 111 11121112222222333343456677788899999999999987 4
Q ss_pred eeeeCCCcceEEEEEc
Q 018318 335 SLVTGGTENHLVLWDL 350 (358)
Q Consensus 335 ~~~~~~~~~~~~~v~~ 350 (358)
++.......+...+++
T Consensus 370 ~~~~~~~~~~~~~~~~ 385 (481)
T PRK04366 370 DLPYDRPCMHEFVLSG 385 (481)
T ss_pred cccCCCCeeEEEEEEC
Confidence 4432222334455553
No 140
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=2.3e-19 Score=170.17 Aligned_cols=221 Identities=20% Similarity=0.208 Sum_probs=152.5
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCcccccccccc
Q 018318 63 MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS 142 (358)
Q Consensus 63 ~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~ 142 (358)
+.++|+ +.+..+.|| ++++++.|.+. .+.+++|++|+..++.++++|||+|+++.+.|++.+....
T Consensus 44 ~~Y~R~--~~pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~--- 109 (386)
T PRK08045 44 HDYSRR--GNPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFD--- 109 (386)
T ss_pred ceeeCC--CCccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH---
Confidence 444444 456677787 78999999653 4667888899999999999999999999998875432110
Q ss_pred CCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhh
Q 018318 143 GGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHIS 220 (358)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~ 220 (358)
......+ +.+..+ + ..|++++++++++ ++++|++++++|| ...|+++|.++|+++|+++++|++++.
T Consensus 110 --~~~~~~g--i~v~~v--d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~ 178 (386)
T PRK08045 110 --SLAKRGC--YRVLFV--D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLS 178 (386)
T ss_pred --HHHhhCC--eEEEEe--C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCc
Confidence 0001122 223333 2 3689999999865 7899999988887 467999999999999999999999865
Q ss_pred hhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHH
Q 018318 221 GLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (358)
Q Consensus 221 g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (358)
+.. ..+++ ++|+++.|++|+++|+. +|+++++++ ++.+.+....... +... ..+
T Consensus 179 ~~~-----~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~--------------~~~~~l~~~~~~~--g~~~-~p~ 236 (386)
T PRK08045 179 PAL-----QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP--------------DVVTELAWWANNI--GVTG-GAF 236 (386)
T ss_pred ccc-----CCchhhCCCEEEeecceeccCCCCceeEEEEeCcH--------------HHHHHHHHHHHhc--CCCC-CHH
Confidence 532 23455 89999999999998776 587777553 4444443221111 1111 111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 297 ~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
. ...+++-+. .+..+++++.+|+..+.++|+++.
T Consensus 237 ~-~~l~~rgl~--tl~~R~~~~~~na~~la~~L~~~p 270 (386)
T PRK08045 237 D-SYLLLRGLR--TLVPRMELAQRNAQAIVKYLQTQP 270 (386)
T ss_pred H-HHHHHhhhc--cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 123333332 367889999999999999999874
No 141
>PLN02880 tyrosine decarboxylase
Probab=99.83 E-value=1.7e-18 Score=168.63 Aligned_cols=264 Identities=14% Similarity=0.087 Sum_probs=164.2
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCC----CccccccCChHHHHHHHHhhcC-----C-----CC-eEEEecCCCCcccc
Q 018318 72 NEFIDEIENLCRSRALQTFHLDPTQW----GVNVQPYSGSPANFAAYTAVLE-----P-----HD-RIMGLDLPSGGHLT 136 (358)
Q Consensus 72 ~~~~~~le~~~~~~la~~~g~~~~~~----~~~v~~~sGt~a~~~~l~a~~~-----~-----gd-~Vl~~~~~~~~~~~ 136 (358)
.+...++|+.+.+|+++++|.+...+ +.-+++++||+||..++.+... . .. .|++..- +|++
T Consensus 117 sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~---aH~S 193 (490)
T PLN02880 117 SPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQ---THSA 193 (490)
T ss_pred CcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCC---chHH
Confidence 35567899999999999999986421 1235567789998888765421 1 12 2333333 3444
Q ss_pred ccccccCCcccccccceeE-EeecccCC-CCCCCCHHHHHHHHhhcC-----CcEEEE--cCCCCCCccchHHHHHHHHH
Q 018318 137 HGYYTSGGKKISATSIYFE-SLPYKVNS-STGYIDYDKLEEKALDFR-----PKLIIC--GGSAYPRDWDYARFRAVADK 207 (358)
Q Consensus 137 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~-~~~~id~~~l~~~l~~~~-----~~~v~~--~~~~~~~~~~l~~i~~la~~ 207 (358)
.. +.+...|.+.. ++.+++|. +++.+|+++|+++|++.+ |-+|+. +.+.++.+.|+++|+++|++
T Consensus 194 v~------Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~ 267 (490)
T PLN02880 194 LQ------KACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKS 267 (490)
T ss_pred HH------HHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHH
Confidence 32 34456665421 23344442 357899999999997532 444443 45667788999999999999
Q ss_pred hCCEEEEechhhhhhhhccccCCCC---CcccEEEecCCccCCCCCe-eEEEEeCCCCCCCCCCCCCccccHHHHhhhhc
Q 018318 208 CGALLLCDMAHISGLVAAQEAANPF---EYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV 283 (358)
Q Consensus 208 ~g~~lvvD~a~~~g~~~~~~~~~~~---~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (358)
||+|++||+||+.++...+.+...+ .++|.++.++|||+..|.+ |++++++......+-. . . ..++....
T Consensus 268 ~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~--~---~-~~Yl~~~~ 341 (490)
T PLN02880 268 NGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLS--T---N-PEFLKNKA 341 (490)
T ss_pred cCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHc--c---C-HHHhcCcc
Confidence 9999999999887655433222122 3789999999999988877 8888876310000000 0 0 00010000
Q ss_pred ------C----CCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcCC
Q 018318 284 ------F----PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 284 ------~----~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
+ ..++.+.... -..++.+++.+..+++.+++++..++++++.+.|++. ++++..+ ....++.+...+
T Consensus 342 ~~~~~~~~~~~~~i~~~rr~~-alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~-~~~~iv~Fr~~~ 419 (490)
T PLN02880 342 SQANSVVDYKDWQIPLGRRFR-SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP-RIFSLVCFRLVP 419 (490)
T ss_pred ccccCCCChhccCcCCCCccc-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CceEEEEEEEeC
Confidence 0 0001111111 2345667777776778899999999999999999876 8998863 344455554444
No 142
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2.3e-19 Score=169.67 Aligned_cols=213 Identities=15% Similarity=0.120 Sum_probs=146.1
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCccccccc
Q 018318 72 NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (358)
Q Consensus 72 ~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g 151 (358)
.+....|| +.++++.|.+. .++++||++|+..++.++++|||+|+++.+.|++..... . ..+...|
T Consensus 60 npt~~~Le----~~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~--~---~~l~~~G 125 (394)
T PRK09028 60 TPTHFAFQ----AAIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLC--D---KILKGFG 125 (394)
T ss_pred CchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH--H---Hhhhhcc
Confidence 35556777 77888887764 366788999999999999999999999998876543210 0 0112234
Q ss_pred ceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccC
Q 018318 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~ 229 (358)
+ ++..++. .|.+.+++++.+ ++|+|++++++|+ ...|+++|+++||++|+++++|++|+.+.. .
T Consensus 126 i--~v~~v~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-----~ 191 (394)
T PRK09028 126 I--ETTYYDP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-----S 191 (394)
T ss_pred e--EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 3 3333321 246788888864 7899999988887 367999999999999999999999887642 2
Q ss_pred CCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHH
Q 018318 230 NPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 305 (358)
Q Consensus 230 ~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~ 305 (358)
.|++ |+|+++.|++||+.|+. +|+++.++ ++.+.+..... ..|... ....+ +..++-
T Consensus 192 ~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~---------------~~~~~l~~~~~--~~G~~~-~p~~a-~l~~rg 252 (394)
T PRK09028 192 RPFEMGVDISIQAATKYIVGHSDVMLGTATANE---------------KHWDQLREHSY--LMGQCT-SPDDV-YLAMRG 252 (394)
T ss_pred CccccCceEEEEeCCeEecCCCCEEEEEEECCH---------------HHHHHHHHHHH--hcCCCC-CHHHH-HHHHcc
Confidence 4566 99999999999998874 57665444 33333332111 112111 11111 222332
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 306 ASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
+ +-+.-+++++.+|+..+.++|+++.
T Consensus 253 l--~TL~lR~~~~~~na~~la~~L~~~p 278 (394)
T PRK09028 253 L--RTLGVRLAQHEKNALKVANWLATRP 278 (394)
T ss_pred c--CcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2 3467889999999999999999984
No 143
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2e-19 Score=171.16 Aligned_cols=214 Identities=18% Similarity=0.194 Sum_probs=149.4
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+....+| +++++++|++. .+.++||+.|+..++. ++++||+|+++.+.|++.+.... ..+...
T Consensus 52 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~-----~~~~~~ 116 (390)
T PRK08064 52 GNPTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT-----EVLSRF 116 (390)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH-----HHHHHc
Confidence 446677777 78999999885 3668999999888875 78999999999998876542110 012234
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+ ++..++. .|++++++++.+ ++++|++++++|+ ...|+++|.++|+++|+++++|++++.+...
T Consensus 117 G~--~v~~v~~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---- 183 (390)
T PRK08064 117 GI--EHTFVDM------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQ---- 183 (390)
T ss_pred CC--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCccccc----
Confidence 54 3444432 378999998865 7899999888876 5779999999999999999999998755321
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
.+++ ++|++++|+||+++|+. +|+++++++ ++.+.+.....+. +....+.-+ +.+++
T Consensus 184 -~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~--------------~~~~~l~~~~~~~--g~~~~~~~a--~l~~~ 244 (390)
T PRK08064 184 -KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE--------------ELAQKLYFLQNSF--GAVLGVQDC--WLVLR 244 (390)
T ss_pred -CchhhCCcEEEeecceeccCCccceeEEEEeCCH--------------HHHHHHHHHHHhc--CCCCCHHHH--HHHHc
Confidence 2344 89999999999998775 488877653 4555554432221 111111111 12222
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
-+ ..+..++++..+++..+.++|++++
T Consensus 245 gl--~tl~~R~~~~~~~a~~la~~L~~~~ 271 (390)
T PRK08064 245 GL--KTLHVRLEHSSETANKIALYLQEHP 271 (390)
T ss_pred cc--CcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 22 2356888999999999999999874
No 144
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.83 E-value=3.6e-18 Score=168.60 Aligned_cols=308 Identities=15% Similarity=0.120 Sum_probs=184.2
Q ss_pred hcccccccchHHHHHHHHHHHHhh----cceeEeccCC-----CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHH
Q 018318 8 GNSSLETVDPEIHDLIEKEKRRQC----RGIELIASEN-----FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEI 78 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~a~~~-----~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l 78 (358)
.++++..+..+.+..+.+.+.+.+ +.+.|..++. .+|+.+.+++.+.+... .+|+.. .....|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~Y~~~------~G~~~l 190 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--EGYSDS------KGLFSA 190 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCC------cChHHH
Confidence 678888888887665555544432 4577776433 23888999988766422 234432 122344
Q ss_pred HHHHHHHHHHhc--CCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeE
Q 018318 79 ENLCRSRALQTF--HLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFE 155 (358)
Q Consensus 79 e~~~~~~la~~~--g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 155 (358)
.+.+.+++.+.. +++++ .|++++|+ +++..++.++++|||+|+++.|.|..+.. .+...|..
T Consensus 191 Reaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~---------~~~~~g~~-- 255 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA---------CVNLAGGT-- 255 (517)
T ss_pred HHHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH---------HHHHCCCE--
Confidence 433334443332 34543 35667775 68989999999999999999998865431 23455654
Q ss_pred EeecccCCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC
Q 018318 156 SLPYKVNSS-TGYIDYDKLEEKALDFRPKLIICGGSAYPR--DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (358)
Q Consensus 156 ~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~ 229 (358)
++.++.+++ ++.+|++++++++.+ ++++|++++|+||+ ..+ +++|.++|++||+++|+|+++ ..+.+.+...
T Consensus 256 ~v~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y-~~~~~~~~~~ 333 (517)
T PRK13355 256 AVHYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIY-DRLVMDGLEH 333 (517)
T ss_pred EEEeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhh-hhhcCCCCCc
Confidence 444444433 478999999998864 78999888888873 444 889999999999999999994 3554433211
Q ss_pred CCC-C-ccc---EEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHH
Q 018318 230 NPF-E-YCH---IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVA 302 (358)
Q Consensus 230 ~~~-~-~~d---~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 302 (358)
.++ . ..+ +.+.|++|.+ +|.|.||++++.... .+. .+.+.+....... ...+.....+...+
T Consensus 334 ~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~-------~~~--~~~~~l~~~~~~~--~~~~~~~q~a~~~a 402 (517)
T PRK13355 334 TSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKR-------IAK--DYIEGLNMLANMR--LCSNVPAQSIVQTA 402 (517)
T ss_pred ccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchh-------hHH--HHHHHHHHHhcCc--CCcChHHHHHHHHH
Confidence 122 1 122 3458999984 788999998653100 000 1222222211111 11222233333334
Q ss_pred HHHhcc-HHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcCC
Q 018318 303 LKQAST-PAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 303 l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
+..... ..+-....+..+.++++.+.|++. |+++.. +..++.+|+++..
T Consensus 403 L~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~g~fy~~~~l~~ 453 (517)
T PRK13355 403 LGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVK-PKAAFYIFPKIDV 453 (517)
T ss_pred hcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCC-CCeeeEEEeecCc
Confidence 421100 111111234556688899999887 888765 5678888988753
No 145
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.83 E-value=3.6e-18 Score=163.31 Aligned_cols=303 Identities=16% Similarity=0.082 Sum_probs=187.0
Q ss_pred hcccccccchHHHHHHHHHHHHh----hcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHH
Q 018318 8 GNSSLETVDPEIHDLIEKEKRRQ----CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENL 81 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~ 81 (358)
.+.++++++++.+..+.+...+. ...+.|..+... +++.+.+++.+.+.... ..|+. ......+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ 76 (393)
T PRK05764 4 LSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGK-TKYTP------AAGIPELREA 76 (393)
T ss_pred hhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCChHHHHHH
Confidence 46778888888765554433321 234556555433 36888888876664321 12322 1233456655
Q ss_pred HHHHHHHhcCC--CCCCCCccccccC-ChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEee
Q 018318 82 CRSRALQTFHL--DPTQWGVNVQPYS-GSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLP 158 (358)
Q Consensus 82 ~~~~la~~~g~--~~~~~~~~v~~~s-Gt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 158 (358)
+.+++.+.+|. +++ .+.+++ +++|+..++.+++++||.|++..|.|.++.. .++..|..+ ++
T Consensus 77 ia~~~~~~~~~~~~~~----~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~---------~~~~~g~~~--~~ 141 (393)
T PRK05764 77 IAAKLKRDNGLDYDPS----QVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE---------MVKLAGGVP--VF 141 (393)
T ss_pred HHHHHHHHhCCCCCHH----HEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH---------HHHHcCCEE--EE
Confidence 55666555554 332 244455 4679999999999999999999998765431 223456544 44
Q ss_pred cccCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCC-
Q 018318 159 YKVNS-STGYIDYDKLEEKALDFRPKLIICGGSAYP--RD---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANP- 231 (358)
Q Consensus 159 ~~~~~-~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~- 231 (358)
++.+. +++.+|++++++++++ ++++|++++++|| .. .++++|.++|++||+++++|++++ .+...+....+
T Consensus 142 ~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~ 219 (393)
T PRK05764 142 VPTGEENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE-KLVYDGAEFTSI 219 (393)
T ss_pred EecCcccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc-ceeeCCCCcccH
Confidence 44442 2457999999999864 7888888888776 23 358899999999999999999964 33322211001
Q ss_pred --C--C--cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHH
Q 018318 232 --F--E--YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVAL 303 (358)
Q Consensus 232 --~--~--~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al 303 (358)
+ + +.++++.|++|++ +|.+.|+++.++ ++.+.+........ .+++.....+...++
T Consensus 220 ~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~---------------~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l 283 (393)
T PRK05764 220 ASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPK---------------ELIKAMSKLQSHST-SNPTSIAQYAAVAAL 283 (393)
T ss_pred HHcCCCCcCCEEEEecCcccccCccceeEEEecCH---------------HHHHHHHHHHhhcc-cCCChHHHHHHHHHH
Confidence 1 1 3568899999986 455679999776 34444443221111 122222222223333
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcCC
Q 018318 304 KQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
.. ....+.+..++..++++.+++.|++. |+++.. +..++.+|+++..
T Consensus 284 ~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~~~ 331 (393)
T PRK05764 284 NG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPK-PEGAFYVFPNVSK 331 (393)
T ss_pred cC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC-CCcceEEEEeccc
Confidence 21 12234566777888889999999988 888765 4567778988864
No 146
>PLN02509 cystathionine beta-lyase
Probab=99.83 E-value=2e-19 Score=173.10 Aligned_cols=215 Identities=19% Similarity=0.200 Sum_probs=146.9
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
|.+..+.+| +++++++|.+. .+.+++|+.|+.+++ .++++||+|+++.+.|++..... . ..+...
T Consensus 131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll--~---~~l~~~ 195 (464)
T PLN02509 131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLL--S---QVVPRS 195 (464)
T ss_pred CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHH--H---HHHHHC
Confidence 556777787 78999998765 366788888875544 57899999999998887642110 0 011234
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+ ++..++ ..|++++++++.+ ++++|++++++|+ ...|+++|+++|++||+++++|++|+.+...
T Consensus 196 G~--~v~~vd------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~---- 262 (464)
T PLN02509 196 GV--VVKRVN------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS---- 262 (464)
T ss_pred Ce--EEEEeC------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC----
Confidence 44 344442 3578999999864 7899998888766 5779999999999999999999998876532
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
.++. ++|++++|++|++.|+. ||+++++++ .+.+.+...... .++...+.- .+..++
T Consensus 263 -~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~--------------~l~~~~~~~~~~--~g~~l~p~~--A~l~lr 323 (464)
T PLN02509 263 -RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------KLAKEVYFLQNS--EGSGLAPFD--CWLCLR 323 (464)
T ss_pred -ChhhcCCcEEEecCcccccCCCccceeEEEeccH--------------HHHHHHHHHHHh--cCCCcCHHH--HHHHHh
Confidence 3445 89999999999998754 688887664 232322211111 111111111 123333
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhC-Cc
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGK-GY 334 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~ 334 (358)
.+ +.+..++++.+++++++.++|+++ .+
T Consensus 324 ~L--~tL~~R~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 324 GI--KTMALRIEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred hh--hhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 33 346788999999999999999987 44
No 147
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=1.7e-19 Score=173.06 Aligned_cols=165 Identities=21% Similarity=0.194 Sum_probs=123.9
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++.++|+ +.+.+.+|| +.++++.|+++ .++++||+.|+.+++.+++++||+|+++..+|++......
T Consensus 55 ~~~y~R~--~~p~~~~le----~~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~-- 121 (433)
T PRK08134 55 GHVYSRI--SNPTVAVLE----ERVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLH-- 121 (433)
T ss_pred CceeecC--cChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHH--
Confidence 3444443 446777887 78999999886 3778999999999999999999999999988875431100
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
..+...|+ ++.+++. -|+++++++|++ ++++|++.++.++ .+.|+++|+++||++|+++++|++|+
T Consensus 122 ---~~l~~~Gi--~v~~vd~------~d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a 189 (433)
T PRK08134 122 ---YTLRRFGI--ETTFVKP------GDIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFT 189 (433)
T ss_pred ---HHHhhCCe--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 01122443 4555543 279999999975 7899988777666 57899999999999999999999998
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEE
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFY 256 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~ 256 (358)
.+.. ..+++ ++|++++|+||+++|+. ||+++.
T Consensus 190 ~~~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 190 TPYL-----LRPFEHGADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred cccc-----CCchhcCCCEEEeccccccCCCCCceEEEEEe
Confidence 7754 23456 89999999999987654 355553
No 148
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.83 E-value=8.9e-19 Score=168.20 Aligned_cols=196 Identities=16% Similarity=0.164 Sum_probs=130.2
Q ss_pred ccCCCCCHHHHHHHhcccccCCCC-CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHh
Q 018318 38 ASENFTSFAVIEALGSALTNKYSE-GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (358)
Q Consensus 38 a~~~~~~~~V~~a~~~~~~~~~~~-g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a 116 (358)
.+-.++|++|++++.+.+.. |+. .+.-.....+ +..+.+| +.+++++|++. + ++++||+.|+..++.
T Consensus 88 lg~s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~g-~r~~~le----~~lA~l~gae~----a-lvv~sg~aAi~l~l~- 155 (454)
T TIGR00474 88 LGRAPLAEEAIEAVTDAARG-YSNLEYDLETGKRG-SRYSHVE----GLLCELTGAED----A-LVVNNNAAAVLLALN- 155 (454)
T ss_pred CCCCCCCHHHHHHHHHHHhc-ccchhccccccccc-hHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHH-
Confidence 34556799999999877753 321 1100000011 2233444 88999999987 2 567899999888884
Q ss_pred hcCCCCeEEEecCCC---CccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC
Q 018318 117 VLEPHDRIMGLDLPS---GGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP 193 (358)
Q Consensus 117 ~~~~gd~Vl~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~ 193 (358)
.+.+||+|++...+| ++.+... ..+...|+ +++.++.+ ...|++++++++.+ ++++|++.+++|.
T Consensus 156 ~l~~GdeVIvs~~e~v~~ggs~~i~------~~~~~~G~--~~~~v~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~ 223 (454)
T TIGR00474 156 TLAKGKEVIVSRGELVEIGGSFRIP------DVMEQSGA--KLVEVGTT---NRTHLKDYEDAITE-NTALLLKVHTSNY 223 (454)
T ss_pred HhCCcCEEEECCChhhhhcchhhHH------HHHHHcCC--EEEEeCCC---CCCCHHHHHHhcCc-CCEEEEEEccCcc
Confidence 478999999988664 2221110 01233554 44455432 34689999999975 7888876554432
Q ss_pred ------CccchHHHHHHHHHhCCEEEEechhhhhhhhc------cccC---CCCC-cccEEEecCCccCCCCCeeEEEEe
Q 018318 194 ------RDWDYARFRAVADKCGALLLCDMAHISGLVAA------QEAA---NPFE-YCHIVTTTTHKSLRGPRAGMIFYR 257 (358)
Q Consensus 194 ------~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~------~~~~---~~~~-~~d~~~~s~~K~l~g~~gG~i~~~ 257 (358)
...|+++|+++||+||+++++|.+ .|.... +..+ .+.+ ++|++++|+||+|+||.+|+++++
T Consensus 224 ~~~G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~ 301 (454)
T TIGR00474 224 RIVGFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGK 301 (454)
T ss_pred cccCCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEEC
Confidence 367999999999999999999974 443311 0111 1223 899999999999999999999998
Q ss_pred CC
Q 018318 258 KG 259 (358)
Q Consensus 258 ~~ 259 (358)
++
T Consensus 302 ~~ 303 (454)
T TIGR00474 302 KE 303 (454)
T ss_pred HH
Confidence 74
No 149
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.83 E-value=1.8e-19 Score=170.77 Aligned_cols=220 Identities=18% Similarity=0.171 Sum_probs=149.5
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
+|.++|+ +.+.+..|| ++++++.|.+. .+.++||+.|+.+++ ++++|||+|+++++.|++.+....
T Consensus 41 ~~~y~r~--~~p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~-- 106 (380)
T PRK06176 41 GYEYSRS--GNPTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD-- 106 (380)
T ss_pred CCcccCC--CChhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH--
Confidence 3445543 456777888 78999999876 377899999988666 578999999999988875432110
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
..+...|. ++..++ ..|++++++++++ ++++|++++++|+ ...|+++|.++||++|+++|+|++++
T Consensus 107 ---~~~~~~gi--~v~~vd------~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a 174 (380)
T PRK06176 107 ---KVLVKNGL--SCTIID------TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFA 174 (380)
T ss_pred ---HHHHhcCe--EEEEcC------CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcc
Confidence 01122343 344442 2489999999875 7899998888776 56799999999999999999999987
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.+.. ..+++ ++|++++|++|+++|+. ||+++++++ ++.+++...... .|....+
T Consensus 175 ~~~~-----~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~--------------~~~~~~~~~~~~--~G~~~~~- 232 (380)
T PRK06176 175 TPYY-----QNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE--------------ALAQEIAFFQNA--IGGVLGP- 232 (380)
T ss_pred cccc-----CCccccCCCEEEecCceeccCCccceeeEEEecHH--------------HHHHHHHHHHHH--hcCCCCH-
Confidence 5432 13445 89999999999998764 688887664 344433321111 1111111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
..+ ...++-+ ..+..+++++.+++.++.++|+++
T Consensus 233 ~~~-~l~~~gl--~tl~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 233 QDS-WLLQRGI--KTLGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred HHH-HHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 111 1111111 235678888999999999999987
No 150
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.83 E-value=3.6e-19 Score=167.15 Aligned_cols=226 Identities=18% Similarity=0.143 Sum_probs=154.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCC-CCCCCccccccCChHHHHHHHHhhcC------------CCC--eEEEecCCCCccccc
Q 018318 73 EFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYSGSPANFAAYTAVLE------------PHD--RIMGLDLPSGGHLTH 137 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~-~~~~~~~v~~~sGt~a~~~~l~a~~~------------~gd--~Vl~~~~~~~~~~~~ 137 (358)
+...++|+.+++++++++|++ .+. ..+++++||+|+..++.++.. +++ .|+++.+.|.++.
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~-- 109 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDA--DGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE-- 109 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCC--CEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH--
Confidence 456689999999999999996 221 235667788899998887742 333 6677776666432
Q ss_pred cccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-----CCcEEEEcCCC--CCCccchHHHHHHHHHhCC
Q 018318 138 GYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPKLIICGGSA--YPRDWDYARFRAVADKCGA 210 (358)
Q Consensus 138 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~-----~~~~v~~~~~~--~~~~~~l~~i~~la~~~g~ 210 (358)
..+...|.. ++.++.+ +++.+|++++++++++. ++++|+++.++ +|...|+++|+++|+++|+
T Consensus 110 -------~~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~ 179 (345)
T cd06450 110 -------KAAAYLDVK--VRLVPVD-EDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDL 179 (345)
T ss_pred -------HHHHHHhcC--eEEeeeC-CCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCC
Confidence 122334544 4444444 25689999999999752 56777655444 4567899999999999999
Q ss_pred EEEEechhhhhhhhccccC---CCCCcccEEEecCCccCCCCCe-eEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCC
Q 018318 211 LLLCDMAHISGLVAAQEAA---NPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS 286 (358)
Q Consensus 211 ~lvvD~a~~~g~~~~~~~~---~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (358)
++++|++|+.+........ ..+.++|++++|+||++++|.| |+++.+
T Consensus 180 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------------- 230 (345)
T cd06450 180 WLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------------- 230 (345)
T ss_pred eEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----------------------------
Confidence 9999999887654221111 1123789999999999877654 443211
Q ss_pred CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 287 LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 287 ~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
..++.++++.+...++++++++..++++++.+.|++. |+++.. +..+.++.+...
T Consensus 231 ---------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~iv~f~~~ 286 (345)
T cd06450 231 ---------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLG-EPNLSLVCFRLK 286 (345)
T ss_pred ---------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCceeEEEEEEC
Confidence 2344556666555567888999999999999999987 787764 234555555543
No 151
>PLN02721 threonine aldolase
Probab=99.82 E-value=3.3e-18 Score=161.06 Aligned_cols=272 Identities=19% Similarity=0.143 Sum_probs=161.5
Q ss_pred eeEeccCC-CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHH
Q 018318 34 IELIASEN-FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (358)
Q Consensus 34 ~~l~a~~~-~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~ 112 (358)
+.|..+++ ++++.+.+++........ ..++ .+...++| +.+++++|.+. .+++++|+.++..
T Consensus 8 ~~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~~--~~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~~ 70 (353)
T PLN02721 8 VDLRSDTVTKPTDAMRAAMANAEVDDD------VLGY--DPTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNLI 70 (353)
T ss_pred hhhhcccccCCCHHHHHHHHhccCCCc------ccCC--CHHHHHHH----HHHHHHhCCce-----eEEecCccHHHHH
Confidence 34444433 457888888864311110 1111 13345666 78999999875 2667889988888
Q ss_pred HHHhhcC-CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh------cCCcEE
Q 018318 113 AYTAVLE-PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD------FRPKLI 185 (358)
Q Consensus 113 ~l~a~~~-~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~------~~~~~v 185 (358)
++.++++ +||+|++..++|.+.+..+ ..+...|.+ ++.++.+ +++.+|++++++++++ .++++|
T Consensus 71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~------~~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 71 SVLVHCDVRGSEVILGDNSHIHLYENG------GISTLGGVH--PRTVKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred HHHHHccCCCCeEEEcCccceehhccc------chhhhcCce--eEecCCC-cCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 8888777 9999999998764322100 012334543 4444444 3678999999999974 267888
Q ss_pred EEcCC-CCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC-CCC-CcccEEEecCCccCCCCCeeEEEEe
Q 018318 186 ICGGS-AYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA-NPF-EYCHIVTTTTHKSLRGPRAGMIFYR 257 (358)
Q Consensus 186 ~~~~~-~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~-~~~-~~~d~~~~s~~K~l~g~~gG~i~~~ 257 (358)
+++++ +++ ...| +++|.++|++||+++++|++|..+........ ..+ .++|.++.|+||+++++.|++++.+
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~ 221 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGS 221 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecC
Confidence 87653 443 3333 78999999999999999999865432111111 111 2789999999999987766656665
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Ccee
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSL 336 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~ 336 (358)
+ ++.+.+....... .+++......+ .+++..+. ...+..++..++++++.+.|++. |+++
T Consensus 222 ~---------------~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 282 (353)
T PLN02721 222 K---------------SFIRKAKRLRKTL-GGGMRQVGVLA-AAALVALQ--ENVPKLEDDHKKAKLLAEGLNQIKGLRV 282 (353)
T ss_pred H---------------HHHHhHHHHHHhc-CCCeehhHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 5 3433332211111 11111111111 11222221 12233455567788999999987 7765
Q ss_pred -eeCCCcceEEEEEcC
Q 018318 337 -VTGGTENHLVLWDLR 351 (358)
Q Consensus 337 -~~~~~~~~~~~v~~~ 351 (358)
.. ...++.+|+++.
T Consensus 283 ~~~-~~~~~~~~~~~~ 297 (353)
T PLN02721 283 NVA-AVETNIVYFDIT 297 (353)
T ss_pred ecC-CccceEEEEEcc
Confidence 33 334567888764
No 152
>PRK07683 aminotransferase A; Validated
Probab=99.82 E-value=5.5e-18 Score=161.65 Aligned_cols=304 Identities=17% Similarity=0.094 Sum_probs=182.2
Q ss_pred cccccccchHHHHHHHHHHHHhhcceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRRQCRGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRA 86 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~l 86 (358)
|.+++.+....+..+...+......+.|..+.. +.++.+.+++.+.+.... .+|+. .....++++.+.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~l 78 (387)
T PRK07683 6 NPRVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITENY-TSYTH------NAGLLELRKAACNFV 78 (387)
T ss_pred hHHHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHH
Confidence 444554444444433333222234466666543 235788888877665322 22322 122345655555666
Q ss_pred HHhcCC--CCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC
Q 018318 87 LQTFHL--DPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS 163 (358)
Q Consensus 87 a~~~g~--~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 163 (358)
.+.+|. +++ ..|++++| ++|+..++.+++++||+|+++.|.|.++.. .+...|+. +++++.+.
T Consensus 79 ~~~~g~~~~~~---~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---------~~~~~g~~--~~~~~~~~ 144 (387)
T PRK07683 79 KDKYDLHYSPE---SEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEP---------IIRLCGAK--PVFIDTRS 144 (387)
T ss_pred HHHhCCCCCCC---CcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHH---------HHHHcCCE--EEEeecCc
Confidence 555565 332 02445555 679999999999999999999987765321 23445654 44555554
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-----
Q 018318 164 STGYIDYDKLEEKALDFRPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----- 233 (358)
Q Consensus 164 ~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~----- 233 (358)
+++.+|++++++.+.+ +++++++++++||+ . .++++|.++|+++|+++|+|+++. .+.+.+.. .++.
T Consensus 145 ~~~~~~~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~-~~~~~~~~~ 221 (387)
T PRK07683 145 TGFRLTAEALENAITE-KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYS-ELVYEQPH-TSIAHFPEM 221 (387)
T ss_pred ccCCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccc-cceeCCCc-CChhhccCC
Confidence 4567899999998864 68888888888773 2 358899999999999999999965 33332211 1111
Q ss_pred -cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH
Q 018318 234 -YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA 310 (358)
Q Consensus 234 -~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~ 310 (358)
+-.+++.|++|.+ +|.|.|+++++++ +.+.+..... .....++.....++...+.. ....
T Consensus 222 ~~~vi~~~s~SK~~~~pGlRiG~i~~~~~---------------l~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~-~~~~ 284 (387)
T PRK07683 222 REKTIVINGLSKSHSMTGWRIGFLFAPSY---------------LAKHILKVHQ-YNVTCASSISQYAALEALTA-GKDD 284 (387)
T ss_pred cCCeEEEeeccccccCccceeEEEEcCHH---------------HHHHHHHHHH-hccCCCChHHHHHHHHHHhC-ChHH
Confidence 2347889999987 5667799998773 4444433211 11111111111222222221 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCCCC
Q 018318 311 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLG 354 (358)
Q Consensus 311 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~~~ 354 (358)
.+..++++.++++++.+.|.+.|+.+.. +..++.+|+.+...+
T Consensus 285 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 327 (387)
T PRK07683 285 AKMMRHQYKKRRDYVYNRLISMGLDVEK-PTGAFYLFPSIGHFT 327 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccC-CCeeEEEEEecccCC
Confidence 3455667788889999999988887765 456777888765433
No 153
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=6.7e-19 Score=166.72 Aligned_cols=219 Identities=18% Similarity=0.200 Sum_probs=149.6
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCcccccccccc
Q 018318 63 MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS 142 (358)
Q Consensus 63 ~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~ 142 (358)
+.++|+ +.+....|| +.+++++|++. .+.++||+.|+..++ .+++|||+|+++.+.|++.+....
T Consensus 42 ~~y~r~--~~p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~--- 106 (377)
T PRK07671 42 YEYSRT--GNPTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMT--- 106 (377)
T ss_pred CCcCCC--CChHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHH---
Confidence 444443 456677887 78999999876 366899998877655 578999999999988875432110
Q ss_pred CCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhh
Q 018318 143 GGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHIS 220 (358)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~ 220 (358)
..+...|+ +++.++ ..|++++++++++ ++++|++++|+|| ...|+++|.++|+++|+++++|++++.
T Consensus 107 --~~~~~~G~--~v~~v~------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~ 175 (377)
T PRK07671 107 --KVLNRFGI--EHTFVD------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMT 175 (377)
T ss_pred --HHHhcCCe--EEEEEC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCc
Confidence 01122344 444443 2489999999975 7899999888876 467999999999999999999999764
Q ss_pred hhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHH
Q 018318 221 GLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (358)
Q Consensus 221 g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (358)
+.. ..+++ ++|++++|++|+++|+. +|+++++++ ++.+.+....... ++...+ .
T Consensus 176 ~~~-----~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~--------------~l~~~~~~~~~~~--g~~~~~-~ 233 (377)
T PRK07671 176 PYW-----QSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP--------------ELAEDLHFVQNST--GGILGP-Q 233 (377)
T ss_pred ccc-----CChhhhCCeEEEecCcccccCCccceeEEEEeCcH--------------HHHHHHHHHHHhh--cCCCCH-H
Confidence 432 13445 88999999999998774 587777664 3444443321111 111111 1
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 297 ~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
.+ ..+++.+ +.+..++++.++|++++.++|+++
T Consensus 234 ~a-~l~~~~l--~tl~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 234 DS-WLLLRGL--KTLGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred HH-HHHHcCc--ChHHHHHHHHHHHHHHHHHHHHcC
Confidence 11 2223322 245678899999999999999987
No 154
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.82 E-value=9.5e-18 Score=160.85 Aligned_cols=310 Identities=15% Similarity=0.115 Sum_probs=182.8
Q ss_pred hhhcccccccchHHHHHHHHHHHH----hhcceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHH
Q 018318 6 EWGNSSLETVDPEIHDLIEKEKRR----QCRGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIE 79 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le 79 (358)
|.-+++++.++.+....+...++. ..+.+.+..+.. ..++.+.+++...+......+|+.. .....+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lR 77 (403)
T PRK08636 4 EIEFNKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVS------KGIYKLR 77 (403)
T ss_pred hHHHHHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCC------CCCHHHH
Confidence 344556666666654444433321 134566654432 2466677776655432111234321 2223455
Q ss_pred HHHHHHHHHhcCCCCCCCCc-cccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEe
Q 018318 80 NLCRSRALQTFHLDPTQWGV-NVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (358)
Q Consensus 80 ~~~~~~la~~~g~~~~~~~~-~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 157 (358)
+.+.+++.+.+|...+. . .|+.++|+ +|+..++.++++|||.|++.+|.|..+.. .+...|+++..+
T Consensus 78 ~~ia~~l~~~~~~~~~~--~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g~~~~~v 146 (403)
T PRK08636 78 LAICNWYKRKYNVDLDP--ETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQ---------AFILAGGNVHKM 146 (403)
T ss_pred HHHHHHHHHHhCCCCCC--CCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcCCEEEEE
Confidence 55667777777754210 1 25566665 69999999999999999999998876431 234566654444
Q ss_pred ecccCCCCCCCCHHHH----HHHHhh--cCCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhcc
Q 018318 158 PYKVNSSTGYIDYDKL----EEKALD--FRPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQ 226 (358)
Q Consensus 158 ~~~~~~~~~~id~~~l----~~~l~~--~~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~ 226 (358)
+++.+ +++.+|++++ ++++++ .+++++++++|+||+ . ..+++|.++|++|++++|+|+++. .+.+.+
T Consensus 147 ~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~-~l~~~~ 224 (403)
T PRK08636 147 PLEYN-EDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYA-DITFDG 224 (403)
T ss_pred ecccc-ccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccch-hhccCC
Confidence 44322 2467888754 565653 256788888778773 3 347789999999999999999953 444332
Q ss_pred ccCCC---CCc-cc--EEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHH
Q 018318 227 EAANP---FEY-CH--IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGA 298 (358)
Q Consensus 227 ~~~~~---~~~-~d--~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 298 (358)
....+ ++. .+ +.+.|++|.+ +|.|.|+++.+++ +.+.+.........+.+.....+
T Consensus 225 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~---------------li~~~~~~~~~~~~~~~~~~q~~- 288 (403)
T PRK08636 225 YKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKK---------------LVGALKKIKSWLDYGMFTPIQVA- 288 (403)
T ss_pred CCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHH---------------HHHHHHHHHHHhcccCChHHHHH-
Confidence 11111 221 23 4578999987 6778899998773 44444332111111111222222
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 299 LAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 299 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
+..++.. ....++..++.+.++++.+.+.|++.|+++.. +..+..+|+++.+
T Consensus 289 ~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~g~~~~~~l~~ 340 (403)
T PRK08636 289 ATIALDG-DQSCVEEIRETYRKRRDVLIESFANAGWELQK-PRASMFVWAKIPE 340 (403)
T ss_pred HHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCcceEEEEECCC
Confidence 2222221 11223556677788889999999988887654 5678889999853
No 155
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.82 E-value=1.3e-18 Score=164.99 Aligned_cols=257 Identities=16% Similarity=0.094 Sum_probs=160.4
Q ss_pred ceeEeccCCCC----CHHHHHHHhcccccCC------CCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccc
Q 018318 33 GIELIASENFT----SFAVIEALGSALTNKY------SEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNV 101 (358)
Q Consensus 33 ~~~l~a~~~~~----~~~V~~a~~~~~~~~~------~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v 101 (358)
.+..+++++|+ +|.+.+++.+.+.... +.+..+++...|. +..+++ ++.+++++|++. .+
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~----e~~la~~~~~~~-----~l 75 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDL----EHKIAHFHGAPE-----AF 75 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHH----HHHHHHHhCCCe-----EE
Confidence 45566788887 5666666665553311 2334444443332 334444 488999999975 37
Q ss_pred cccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-
Q 018318 102 QPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF- 180 (358)
Q Consensus 102 ~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~- 180 (358)
++++|+.|+..++..+.++||.|++...+|++.+. .+..... ..+.+ ..+|++++++++++.
T Consensus 76 ~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~---------~~~~~~~--~~~~~------~~~d~~~l~~~l~~~~ 138 (370)
T PRK05937 76 IVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVY---------SLSVISG--WHQSF------RHNDLDHLESLLESCR 138 (370)
T ss_pred EECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHH---------HHHHcCC--ceEEe------cCCCHHHHHHHHHhhh
Confidence 78999998887666666788888888888876542 1222111 11223 257899999999742
Q ss_pred ----CCcEEEEcCCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccC----CCCCcccEEEecCCccCCCCC
Q 018318 181 ----RPKLIICGGSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA----NPFEYCHIVTTTTHKSLRGPR 250 (358)
Q Consensus 181 ----~~~~v~~~~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~----~~~~~~d~~~~s~~K~l~g~~ 250 (358)
++.+|++++++ .|...|+++|.++|+++|+++++|++|+.|........ ..+...++.++|++|.+ |+.
T Consensus 139 ~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~ 217 (370)
T PRK05937 139 QRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSM 217 (370)
T ss_pred ccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcC
Confidence 23455566543 45788999999999999999999999998865432110 11112346778999986 567
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCC-CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (358)
|+.+++.++ ..+.+.....+. ..++.++..++++.++++.+... .....+++.+++++|.+.|
T Consensus 218 G~~vl~~~~---------------~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-~~~~~~~l~~l~~~l~~~l 281 (370)
T PRK05937 218 GAALLSSSE---------------VKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-GELARKQLFRLKEYFAQKF 281 (370)
T ss_pred ceEEEcCHH---------------HHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhc
Confidence 765656552 222222111111 12334555667777777776432 2456678888888998888
Q ss_pred hhC
Q 018318 330 TGK 332 (358)
Q Consensus 330 ~~~ 332 (358)
...
T Consensus 282 ~~~ 284 (370)
T PRK05937 282 SSA 284 (370)
T ss_pred CCC
Confidence 653
No 156
>PLN02590 probable tyrosine decarboxylase
Probab=99.82 E-value=6.8e-18 Score=164.66 Aligned_cols=264 Identities=16% Similarity=0.122 Sum_probs=165.7
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCC----CccccccCChHHHHHHHHhhcC--------C--CC-eEEEecCCCCcccc
Q 018318 72 NEFIDEIENLCRSRALQTFHLDPTQW----GVNVQPYSGSPANFAAYTAVLE--------P--HD-RIMGLDLPSGGHLT 136 (358)
Q Consensus 72 ~~~~~~le~~~~~~la~~~g~~~~~~----~~~v~~~sGt~a~~~~l~a~~~--------~--gd-~Vl~~~~~~~~~~~ 136 (358)
.+...++|+.+.+|+++++|.+...+ +.-+++++||+|+..++.+... . .+ .|++... +|++
T Consensus 165 sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~---aH~S 241 (539)
T PLN02590 165 SPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ---THSS 241 (539)
T ss_pred CchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC---chHH
Confidence 46667899999999999999986311 1235577889898888766422 1 12 2233333 3443
Q ss_pred ccccccCCccccccccee-EEeecccCC-CCCCCCHHHHHHHHhhcC-----CcEEEE--cCCCCCCccchHHHHHHHHH
Q 018318 137 HGYYTSGGKKISATSIYF-ESLPYKVNS-STGYIDYDKLEEKALDFR-----PKLIIC--GGSAYPRDWDYARFRAVADK 207 (358)
Q Consensus 137 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~-~~~~id~~~l~~~l~~~~-----~~~v~~--~~~~~~~~~~l~~i~~la~~ 207 (358)
.. +.+...|.+. .++.+++|. +++.+|+++|+++|++.+ |-+|+. +.++++...|+++|+++|++
T Consensus 242 v~------KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~ 315 (539)
T PLN02590 242 FR------KACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKK 315 (539)
T ss_pred HH------HHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHH
Confidence 22 3445566532 133344443 357899999999997532 444543 45667888999999999999
Q ss_pred hCCEEEEechhhhhhhhccccCC---CCCcccEEEecCCccCCCCCe-eEEEEeCCCCCCCCCCCCCccccHHHHhhhh-
Q 018318 208 CGALLLCDMAHISGLVAAQEAAN---PFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFA- 282 (358)
Q Consensus 208 ~g~~lvvD~a~~~g~~~~~~~~~---~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 282 (358)
||+|++||+|++..+...+.+.. -++.+|.++..+|||+..|.+ |++++++.......-. .-.+++...
T Consensus 316 ~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~------~~~~YL~~~~ 389 (539)
T PLN02590 316 YGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALK------TNPEYLEFKV 389 (539)
T ss_pred hCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhh------cCHHHhCCcc
Confidence 99999999996544433332221 123689999999999987755 8888877410000000 000111000
Q ss_pred ---------cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcCC
Q 018318 283 ---------VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 283 ---------~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
.....+.+.. .....++.+++.+..+++++++++..+++++|.+.|++. +|++..+ ....++.....+
T Consensus 390 ~~~~~~~d~~d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~-~~l~iVcFr~~~ 467 (539)
T PLN02590 390 SKKDTVVNYKDWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT-RYFSLVCFRLAP 467 (539)
T ss_pred cccccCCCccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CceEEEEEEecC
Confidence 0001111222 234456888888877889999999999999999999886 7998863 333344444334
No 157
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.82 E-value=8.2e-19 Score=166.31 Aligned_cols=215 Identities=20% Similarity=0.220 Sum_probs=148.2
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+....|| ++++++.|.+. .+.+++|++|+..++.+++++||+|++..+.|++.+.... ......
T Consensus 49 ~~p~~~~le----~~lA~l~g~~~-----v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~-----~~~~~~ 114 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGAG-----AVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLN-----ALAKKG 114 (382)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH-----HHHhhc
Confidence 456677787 78999998643 3666777889999999999999999999998876432110 001111
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
+. .+... + ..|++++++++++ ++++|++++++|| ...|+++|.++|+++|+++++|++|+.+...
T Consensus 115 ~~--~v~~~--d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---- 181 (382)
T TIGR02080 115 CF--RVLFV--D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQ---- 181 (382)
T ss_pred Ce--EEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 22 22222 1 2489999999875 7899999888876 4679999999999999999999998765432
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
.++. ++|++++|++|++.|+. +|+++++++ ++.+++...... .|....+ +. .+.+++
T Consensus 182 -~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~--------------~~~~~l~~~~~~--~g~~~sp-~~-a~l~lr 242 (382)
T TIGR02080 182 -NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP--------------QVAEELAWWANN--LGVTGGA-FD-SYLTLR 242 (382)
T ss_pred -CchhhCCCEEEeecceeccCCCCceeEEEEeCCH--------------HHHHHHHHHHHc--cCCCCCH-HH-HHHHHc
Confidence 3444 88999999999987653 688877664 444444432211 1111111 11 123333
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
.+ +.+..+++++.+|+..+.++|+++.
T Consensus 243 ~l--~tl~~R~~~~~~na~~~a~~L~~~p 269 (382)
T TIGR02080 243 GL--RTLVARMRLQQRNAQAIVEYLQTQP 269 (382)
T ss_pred cc--chHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33 3466778999999999999999874
No 158
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.82 E-value=3.2e-18 Score=163.22 Aligned_cols=237 Identities=12% Similarity=0.111 Sum_probs=156.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhc--C-CCCeEEEecCCCCccccccccccCCcccc
Q 018318 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVL--E-PHDRIMGLDLPSGGHLTHGYYTSGGKKIS 148 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~--~-~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 148 (358)
.....+.+....++++++|++..+ ..+.+++|| .++.+++.++- + +||+|++++..|.+.. +.+.
T Consensus 101 s~~~~l~~~~e~~~~~~~G~~~~~--~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~---------kAi~ 169 (444)
T TIGR03531 101 SLLYKLTNKLVKDFLKLLGLRSIK--SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI---------KAIS 169 (444)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCC--EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH---------HHHH
Confidence 334455566668899999998311 135567778 58887877763 2 6899999987665432 3455
Q ss_pred cccceeEEeecccCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCC-CC--CccchHHHHHHHHHhCCEEEEechhhhhhh
Q 018318 149 ATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICGGSA-YP--RDWDYARFRAVADKCGALLLCDMAHISGLV 223 (358)
Q Consensus 149 ~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~--~~~~v~~~~~~-~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~ 223 (358)
..|.+..+++...+++++.+|+++++++|.+. +..++++..++ ++ .+.|+++|+++|++||+++|+|+||+.+..
T Consensus 170 ~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~ 249 (444)
T TIGR03531 170 TAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN 249 (444)
T ss_pred HcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh
Confidence 67765444443244557899999999999753 23444444443 33 568999999999999999999999876543
Q ss_pred hccccC-CCCC--cccEEEecCCccCCCCC-eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHH
Q 018318 224 AAQEAA-NPFE--YCHIVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGAL 299 (358)
Q Consensus 224 ~~~~~~-~~~~--~~d~~~~s~~K~l~g~~-gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 299 (358)
...... ..+. .+|++++|+||++..|. ||+++++++ ++.+.+... .++.. ...... .+
T Consensus 250 ~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~--------------el~~~i~~~-y~g~~--~~s~~~-~~ 311 (444)
T TIGR03531 250 KYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE--------------NFIQEISKS-YPGRA--SASPSL-DV 311 (444)
T ss_pred hhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH--------------HHHHHHHHh-ccCCC--CChHHH-HH
Confidence 211111 1122 47999999999987654 566667664 555555543 12211 111222 23
Q ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC----Cceeee
Q 018318 300 AVALKQASTPAFKAYAKQVKANAVALGNYLTGK----GYSLVT 338 (358)
Q Consensus 300 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----G~~~~~ 338 (358)
++++..+..+++++.+++..++++++.+.|.+. |.++..
T Consensus 312 ~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~ 354 (444)
T TIGR03531 312 LITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLD 354 (444)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeec
Confidence 455555555678899999999999999999874 676664
No 159
>PRK05939 hypothetical protein; Provisional
Probab=99.81 E-value=7e-19 Score=167.39 Aligned_cols=157 Identities=17% Similarity=0.163 Sum_probs=120.8
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++.++|+ |.+.+..|| +.++++.|.+. .+.++||+.|+..++.++++|||+|+++.+.|+++....
T Consensus 38 ~~~Y~r~--g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~--- 103 (397)
T PRK05939 38 GFTYARQ--GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLF--- 103 (397)
T ss_pred CCCcCCC--CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHH---
Confidence 3444443 668888898 78999999886 377899999999999999999999999998887654221
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
..+...|+ ++..++. .|++++++++.+ ++++|++++++|+ ...|+++|+++||++|+++++|++|+
T Consensus 104 ---~~l~~~G~--~v~~v~~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a 171 (397)
T PRK05939 104 ---GTLRGLGV--EVTMVDA------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMT 171 (397)
T ss_pred ---HHHHhcCC--EEEEECC------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcc
Confidence 12233454 3444432 489999999965 7899988877766 56799999999999999999999987
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCC
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGP 249 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~ 249 (358)
.+... .+.. ++|+++.|++|+++|.
T Consensus 172 ~~~~~-----~~~~~gaDivv~S~sK~~~g~ 197 (397)
T PRK05939 172 SPWLF-----RPKDVGASLVINSLSKYIAGH 197 (397)
T ss_pred ccccc-----CccccCCEEEEecCeecccCC
Confidence 66422 2344 8999999999999764
No 160
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.81 E-value=7.5e-18 Score=158.61 Aligned_cols=267 Identities=12% Similarity=0.051 Sum_probs=167.0
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCC
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPH 121 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~g 121 (358)
+++.+.+++.+..... ..|+. ......|.+.+.+++.+.+|.+-+. ...|++++|+ +|+..++.+++++|
T Consensus 14 ~~~~~~~~~~~~~~~~--~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~-~~~Iiit~Gs~~ai~~~~~~~~~~g 84 (350)
T TIGR03537 14 TPPFIRKALIDAVPEV--SQYPS------ALGTKALREAISGWFERRFGVKLDP-DAQVLPSAGSKEAIFHFPLVFIDPE 84 (350)
T ss_pred CCHHHHHHHHHHHhcc--CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEcCChHHHHHHHHHHHcCCC
Confidence 3788888887654221 12322 1223355555667777766753210 0135567775 58888888888887
Q ss_pred ---CeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc
Q 018318 122 ---DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLIICGGSAYP--RD 195 (358)
Q Consensus 122 ---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~ 195 (358)
|+|++..|.|..+.. .+...|.. +++++.+. +++.+|++++++++.+ +++++++++++|| ..
T Consensus 85 ~~~d~Vl~~~p~y~~~~~---------~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~ 152 (350)
T TIGR03537 85 EDRRRVIFGTPGYPVYER---------GALFAGGE--PTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTGAT 152 (350)
T ss_pred CCCceEEEcCCCCcchHH---------HHHhcCCE--EEEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcCcc
Confidence 699999988765431 23456654 44445442 2456899999999875 7898888878877 34
Q ss_pred cc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C-cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCC
Q 018318 196 WD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKG 266 (358)
Q Consensus 196 ~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~-~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~ 266 (358)
.+ +++|.++|++||+++|+|+++.. +...+. ..++ + .-.+++.|++|.+ +|.+.|+++.++
T Consensus 153 ~~~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~-~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~-------- 222 (350)
T TIGR03537 153 APRSYLKETIAMCREHGIILCSDECYTE-IYFGEP-PHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDE-------- 222 (350)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEeccccc-cccCCC-CCchhhcCcCCEEEEeecccccCCccccceeeecCH--------
Confidence 45 88999999999999999999642 222211 1111 1 2237788999986 466779998765
Q ss_pred CCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEE
Q 018318 267 QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLV 346 (358)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~ 346 (358)
++.+.+.........++ +.....++..++. ........+++++++++.+.+.|...|+++.. +..+..+
T Consensus 223 -------~~~~~~~~~~~~~~~~~-~~~~q~~~~~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~-~~g~~~~ 291 (350)
T TIGR03537 223 -------KLISFLRKLRANFGVAS-PDFVQAAAKAAWS--DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLY-PDATFYL 291 (350)
T ss_pred -------HHHHHHHHHHHhhccCC-CHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCeEEEE
Confidence 34444443222221121 1112222222222 11223566777888899999999999988764 4567778
Q ss_pred EEEcC
Q 018318 347 LWDLR 351 (358)
Q Consensus 347 ~v~~~ 351 (358)
|+++.
T Consensus 292 ~~~~~ 296 (350)
T TIGR03537 292 WVKVP 296 (350)
T ss_pred EEECC
Confidence 99875
No 161
>PLN02368 alanine transaminase
Probab=99.81 E-value=5.2e-18 Score=161.97 Aligned_cols=307 Identities=10% Similarity=0.010 Sum_probs=187.2
Q ss_pred chhhcccccccchHHHHHHHHHHHH----hhcceeEeccCC---------C----------------------CCHHHHH
Q 018318 5 NEWGNSSLETVDPEIHDLIEKEKRR----QCRGIELIASEN---------F----------------------TSFAVIE 49 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~a~~~---------~----------------------~~~~V~~ 49 (358)
-++.|+++..++.+.+..+.+.+.+ ..+.+.+..|+. + .|+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~ 87 (407)
T PLN02368 8 YESLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIA 87 (407)
T ss_pred hhhcCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHH
Confidence 3567788888888876655544332 234566666543 2 1444444
Q ss_pred HHhcccccC--CCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC--CCCCCccccccCCh-HHHHHHHHhhc-CCCCe
Q 018318 50 ALGSALTNK--YSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PTQWGVNVQPYSGS-PANFAAYTAVL-EPHDR 123 (358)
Q Consensus 50 a~~~~~~~~--~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~--~~~~~~~v~~~sGt-~a~~~~l~a~~-~~gd~ 123 (358)
+....+... ...+|+.. ....+|.+.+.+++.+.+|.. ++ .|+.++|+ +++..++.+++ +|||+
T Consensus 88 ~a~~~l~~~~~~~~~Y~~~------~G~~~LR~aia~~~~~~~g~~~~~~----~I~it~Ga~~al~~~~~~l~~~pGd~ 157 (407)
T PLN02368 88 RAKHYLSLTSGGLGAYSDS------RGLPGVRKEVAEFIERRDGYPSDPE----LIFLTDGASKGVMQILNAVIRGEKDG 157 (407)
T ss_pred HHHHHHhcCCCCCCCCCCC------CCCHHHHHHHHHHHHHhcCCCCChh----hEEEcccHHHHHHHHHHHHcCCCCCE
Confidence 433333211 11223322 222345555567777766743 33 35567765 58988998887 79999
Q ss_pred EEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhc-----CCcEEEEcCCCCCC--c
Q 018318 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDF-----RPKLIICGGSAYPR--D 195 (358)
Q Consensus 124 Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~-----~~~~v~~~~~~~~~--~ 195 (358)
|+++.|.|..+.. .+...|..+ ++++.+.+ ++.+|++++++++++. +++++++++|+||+ .
T Consensus 158 Vli~~P~Y~~y~~---------~~~~~g~~~--v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v 226 (407)
T PLN02368 158 VLVPVPQYPLYSA---------TISLLGGTL--VPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQC 226 (407)
T ss_pred EEEeCCCCccHHH---------HHHHcCCEE--EEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCcc
Confidence 9999998876532 234566544 44444432 4689999999998631 57888888888873 3
Q ss_pred ---cchHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCC-------C----C-c-ccEEEecCCccC---CCCCeeEEE
Q 018318 196 ---WDYARFRAVADKCGALLLCDMAHISGLVAAQE-AANP-------F----E-Y-CHIVTTTTHKSL---RGPRAGMIF 255 (358)
Q Consensus 196 ---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~-------~----~-~-~d~~~~s~~K~l---~g~~gG~i~ 255 (358)
..+++|.++|++||+++|+|+++ ..+.+.+. ...+ + + . --+++.|++|.+ +|.|.||++
T Consensus 227 ~s~e~l~~l~~~a~~~~~~II~DE~Y-~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i 305 (407)
T PLN02368 227 LSEANLREILKFCYQERLVLLGDEVY-QQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFE 305 (407)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEE
Confidence 35788899999999999999994 45554331 1111 1 1 1 226788999985 588999998
Q ss_pred E---eCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhc---------cHHHHHHHHHHHHHHH
Q 018318 256 Y---RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS---------TPAFKAYAKQVKANAV 323 (358)
Q Consensus 256 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~---------~~~~~~~~~~~~~~~~ 323 (358)
+ +. ++.+.+....... . +++.....++.+++..-. .++..++++.++++++
T Consensus 306 ~~~~~~---------------~li~~~~~~~~~~-~-~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~ 368 (407)
T PLN02368 306 MTNIPP---------------KTVEEIYKVASIA-L-SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRAR 368 (407)
T ss_pred EeCCCH---------------HHHHHHHHHhccc-C-CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 5 33 3444444431111 1 233333333344443110 0112345677888899
Q ss_pred HHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 324 ALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 324 ~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
.+.+.|+++ |+.+.. +..++.+|+++.
T Consensus 369 ~~~~~L~~~~g~~~~~-P~Gafy~~~~i~ 396 (407)
T PLN02368 369 MMTDGFNSCKNVVCNF-TEGAMYSFPQIK 396 (407)
T ss_pred HHHHHHhCCCCeEeCC-CCeeeEeccCCC
Confidence 999999997 888764 577888998765
No 162
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.81 E-value=7.4e-19 Score=164.63 Aligned_cols=266 Identities=14% Similarity=0.058 Sum_probs=171.9
Q ss_pred CCCHHHHHHHhcccccCCCC--CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC
Q 018318 42 FTSFAVIEALGSALTNKYSE--GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE 119 (358)
Q Consensus 42 ~~~~~V~~a~~~~~~~~~~~--g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~ 119 (358)
.+|..|++++..++.+.... |.....++ ..++.+.++ .+++.++++|+++.++. +.++..|||.|+++++.++++
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr-~~~f~~~~~-~~~~~l~~l~~~~~~~~-v~~~~gsgT~a~ea~~~nl~~ 78 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHR-SKEFEAVAN-EAESDLRELLNIPDNYE-VLFLQGGATGQFAAVPLNLLA 78 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCC-chHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCchHHHHHHHHhcCC
Confidence 46889999999887642211 11111122 345666665 78899999999743211 333335589999999999999
Q ss_pred CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCC--CCCcc
Q 018318 120 PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLIICGGSA--YPRDW 196 (358)
Q Consensus 120 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~~~~~~v~~~~~~--~~~~~ 196 (358)
+||++++... |.+++.+. ..++..|. +..+..+-.. ....+|+++++. +.++++|.+.+.+ +|...
T Consensus 79 ~~~~~l~i~~---G~fg~r~~----~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~th~ETstGv~~ 147 (349)
T TIGR01364 79 EGKVADYIVT---GAWSKKAA----KEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI---SEDAAYVHYCANETIHGVEF 147 (349)
T ss_pred CCCeEEEEEC---CHHHHHHH----HHHHHhCC-cEEEeccccCCCCCCCCHHhcCC---CCCCCEEEEcCCCCcccEec
Confidence 9999988763 33333221 12234454 3433322000 122466666552 2367888776554 44444
Q ss_pred chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeCCCCC-CCCCCCCCcccc
Q 018318 197 DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKKGQPEGAVYD 274 (358)
Q Consensus 197 ~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~~~~~~~~~~~ 274 (358)
+ ++++.++++++||++|++|.. +.+++..|++++|+||++ ||+| |+++.+++..+ +.+..+.+. +
T Consensus 148 ~-----~l~~~~~~l~iVDavss~g~~-----~id~~~~d~~~~ssqK~l-gP~Glg~l~~s~~~~~~~~~~~~~~~--~ 214 (349)
T TIGR01364 148 R-----ELPDVKNAPLVADMSSNILSR-----PIDVSKFGLIYAGAQKNI-GPAGLTVVIVRKDLLGRASRITPSML--N 214 (349)
T ss_pred c-----eecccCCCeEEEEccccccCc-----cCCHHHccEEEEeccccc-CCCceEEEEECHHHHhhcccCCCCcc--h
Confidence 4 677778999999999998864 234446789999999987 5998 89888875432 222111110 2
Q ss_pred HHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHhhC-Cceee
Q 018318 275 FEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGK-GYSLV 337 (358)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-G~~~~ 337 (358)
+....+.. ...++|+.+.+.++.+|++.+..+ +++.+.+++.++++++++.|++. |+...
T Consensus 215 ~~~~~~~~---~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~ 276 (349)
T TIGR01364 215 YKIHAEND---SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRN 276 (349)
T ss_pred HHHHHhcC---CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeecc
Confidence 21111111 123578899999999999998876 58999999999999999999999 66544
No 163
>PLN02656 tyrosine transaminase
Probab=99.81 E-value=7.3e-18 Score=161.87 Aligned_cols=288 Identities=15% Similarity=0.056 Sum_probs=173.7
Q ss_pred cceeEeccCC------CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCC--CCCCCCccccc
Q 018318 32 RGIELIASEN------FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL--DPTQWGVNVQP 103 (358)
Q Consensus 32 ~~~~l~a~~~------~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~--~~~~~~~~v~~ 103 (358)
..+.|..++. .+|+.+++++.+.+......+|... ....++++.+.+++.+.+|. +++ .|++
T Consensus 32 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lr~~ia~~~~~~~g~~~~~~----~i~~ 101 (409)
T PLN02656 32 RVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPT------VGLPQARRAIAEYLSRDLPYKLSLD----DVFI 101 (409)
T ss_pred eeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCC------CCCHHHHHHHHHHHHHhcCCCCCcc----cEEE
Confidence 4567766543 3478999988776654322234221 12234544444555555443 333 2444
Q ss_pred cCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHHhhcC
Q 018318 104 YSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFR 181 (358)
Q Consensus 104 ~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~~~ 181 (358)
++| ++|+..++.++++|||+|+++.|.|+.+.. .....|..+..+ +.+. +++.+|++++++++++ +
T Consensus 102 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g~~~~~i--~~~~~~~~~~d~~~l~~~~~~-~ 169 (409)
T PLN02656 102 TSGCTQAIDVALSMLARPGANILLPRPGFPIYEL---------CAAFRHLEVRYV--DLLPEKGWEVDLDAVEALADQ-N 169 (409)
T ss_pred eCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH---------HHHHcCCEEEEE--eCCCcCCCCCCHHHHHHHhcc-C
Confidence 554 679999999999999999999998764321 123456544444 4332 2467999999998864 6
Q ss_pred CcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C--cccEEEecCCccC--CCC
Q 018318 182 PKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E--YCHIVTTTTHKSL--RGP 249 (358)
Q Consensus 182 ~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~--~~d~~~~s~~K~l--~g~ 249 (358)
+++|++++++||+ . .++++|.++|++||+++|+|+++. .+.+.+....++ + ..-+++.|++|.+ +|.
T Consensus 170 ~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl 248 (409)
T PLN02656 170 TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYG-HLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGW 248 (409)
T ss_pred ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhh-hcccCCCCcccHHHhcccCcEEEEcccchhccCcce
Confidence 7888888788773 2 368899999999999999999953 554433211122 1 1236789999974 677
Q ss_pred CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 018318 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (358)
Q Consensus 250 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (358)
|.|++++++.-. .+...++.+.+....... ++++.....++..++.......++..++++.++++.+.+.|
T Consensus 249 RiG~~i~~~~~~-------~~~~~~~~~~~~~~~~~~--~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L 319 (409)
T PLN02656 249 RLGWFVTTDPSG-------SFRDPKIVERIKKYFDIL--GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRI 319 (409)
T ss_pred eEEEEEEeCccc-------ccccHHHHHHHHHHHhhh--cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999853100 000003444444321111 12233333333444432111234667778888899999999
Q ss_pred hhCC-ceeeeCCCcceEEEEEcC
Q 018318 330 TGKG-YSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 330 ~~~G-~~~~~~~~~~~~~~v~~~ 351 (358)
++.+ +.....+..+..+|+++.
T Consensus 320 ~~~~~~~~~~~p~gg~~~w~~l~ 342 (409)
T PLN02656 320 KEIPCITCPHKPEGSMAVMVKLN 342 (409)
T ss_pred hhCCCCcCCcCCCeEEEEEEecc
Confidence 8873 332223567788999874
No 164
>PRK06460 hypothetical protein; Provisional
Probab=99.81 E-value=1.2e-18 Score=165.12 Aligned_cols=213 Identities=17% Similarity=0.167 Sum_probs=142.9
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+...++| +++++++|++. .+.+++|+.|+..++.++++|||+|++..+.+++.+... . ..++..
T Consensus 43 ~~p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~--~---~~~~~~ 108 (376)
T PRK06460 43 ANPTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFF--T---DYLKNW 108 (376)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHH--H---HHHHhh
Confidence 345666776 78999999976 366789999999999999999999999877665432111 0 112345
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+.+ ..++.+ +.+.+++.++ .++++|++++++|| ...|+++|.++|+++|+++++|++|+.+..
T Consensus 109 G~~v--~~~~~~------~~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~----- 174 (376)
T PRK06460 109 GVNV--DASNPG------SDNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN----- 174 (376)
T ss_pred CcEE--EEECCC------CHHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-----
Confidence 5543 333321 2234454443 47899999988876 578999999999999999999999865421
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
..++. ++|+++.|+||+++|++ +|++++++ ++.+.+.....+.. .+.. + ..+ ..+++
T Consensus 175 ~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~---------------~l~~~l~~~~~~~g-~~~~-~-~~a-~~~l~ 235 (376)
T PRK06460 175 QKPLELGADIVVHSASKFLAGHNDVIAGLAAGYG---------------KLLNVIDQMRRTLG-TSLD-P-HAA-YLTLR 235 (376)
T ss_pred CChhhcCCCEEEeecceeccCCCCceEEEEecCH---------------HHHHHHHHHHHhcC-CCCC-H-HHH-HHHHh
Confidence 12333 78999999999998764 78888766 35454443222211 1111 1 122 22222
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
.. +.++.+++++.+|++++.++|+++
T Consensus 236 ~~--~~l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 236 GI--KTLKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred ch--hhHHHHHHHHHHHHHHHHHHHHcC
Confidence 21 235788899999999999999987
No 165
>PRK08363 alanine aminotransferase; Validated
Probab=99.81 E-value=1.2e-17 Score=159.84 Aligned_cols=282 Identities=16% Similarity=0.127 Sum_probs=169.9
Q ss_pred cceeEeccCC-----CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC--CCCCCCCcccccc
Q 018318 32 RGIELIASEN-----FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH--LDPTQWGVNVQPY 104 (358)
Q Consensus 32 ~~~~l~a~~~-----~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g--~~~~~~~~~v~~~ 104 (358)
..+.|..+.. .+++.+.+++.+.+.... ..|+. .+...+|++.+.+++.+.+| ++++ .|+++
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~----~i~it 99 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-NYYGP------SEGLPELREAIVKREKRKNGVDITPD----DVRVT 99 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-CCCCC------CCCcHHHHHHHHHHHHHhcCCCCChh----hEEEe
Confidence 3477776543 357888888877654321 12221 12234565455555555545 3443 35456
Q ss_pred CC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeec-ccCCCCCCCCHHHHHHHHhhcCC
Q 018318 105 SG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY-KVNSSTGYIDYDKLEEKALDFRP 182 (358)
Q Consensus 105 sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~id~~~l~~~l~~~~~ 182 (358)
+| ++|+..++.+++++||.|++..|+|.++.. .++..|.. .+.+ +.+++++.+|++++++++.+ ++
T Consensus 100 ~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~---------~~~~~g~~--~v~~~~~~~~~~~~d~~~l~~~~~~-~~ 167 (398)
T PRK08363 100 AAVTEALQLIFGALLDPGDEILIPGPSYPPYTG---------LVKFYGGV--PVEYRTIEEEGWQPDIDDIRKKITE-KT 167 (398)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHHcCCE--EEEeccccccCCcCCHHHHHhhCCc-ce
Confidence 65 569999999999999999999998875431 22345543 3333 33434567999999998864 67
Q ss_pred cEEEEcCCCCCC--ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCC--CCCcc--cEEEecCCccC--CCCCe
Q 018318 183 KLIICGGSAYPR--DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFEYC--HIVTTTTHKSL--RGPRA 251 (358)
Q Consensus 183 ~~v~~~~~~~~~--~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~--~~~~~--d~~~~s~~K~l--~g~~g 251 (358)
++|++++++||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+.... .+... -+++.|++|++ +|.+.
T Consensus 168 ~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRi 246 (398)
T PRK08363 168 KAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD-LMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRL 246 (398)
T ss_pred EEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhh-hhccCCcccCHHHcCcCCcEEEEecchhccCCccceE
Confidence 888888887763 334 8899999999999999999954 3333221111 11121 36678999985 56778
Q ss_pred eEEEE--eCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 018318 252 GMIFY--RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (358)
Q Consensus 252 G~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (358)
|++++ +++. +. .+...+....... . +.+.....+...++.. ..+.+++..++++++++++.+.|
T Consensus 247 G~~~~~~~~~~---------~~--~l~~~~~~~~~~~-~-~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L 312 (398)
T PRK08363 247 GYIYFVDPEGK---------LA--EVREAIDKLARIR-L-CPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRL 312 (398)
T ss_pred EEEEEeCcHHH---------HH--HHHHHHHHHhccc-c-cCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 99997 3320 00 1222222111001 1 1122222222333332 12234666788888999999999
Q ss_pred hhC-CceeeeCCCcceEEEEEcCC
Q 018318 330 TGK-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 330 ~~~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
++. |+++.. +..++.+|+.+..
T Consensus 313 ~~~~~~~~~~-p~g~~~~~~~l~~ 335 (398)
T PRK08363 313 NEIPGISTTK-PQGAFYIFPRIEE 335 (398)
T ss_pred hcCCCCEecC-CCeEEEEEEEecc
Confidence 887 777654 5677778876643
No 166
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.8e-18 Score=165.92 Aligned_cols=167 Identities=22% Similarity=0.203 Sum_probs=122.5
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++.++|+ +.+....|| +.++++.|.+. .+.++||+.|+..++.+++++||+|++..+.|++.+... .
T Consensus 49 ~~~y~r~--~~pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~--~ 115 (425)
T PRK06084 49 GNIYTRI--MNPTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLL--A 115 (425)
T ss_pred CccccCC--CCchHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHH--H
Confidence 3444443 446667787 78999999765 367899999999999999999999999988777533110 0
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
..+...| +++.+++ ..|++++++++++ ++++|++++++|| ...|+++|.++|+++|+++|+|++|+
T Consensus 116 ---~~l~~~g--i~v~~~d------~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a 183 (425)
T PRK06084 116 ---HTLPRIG--IETRFAA------HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVA 183 (425)
T ss_pred ---Hhcccce--eEEEEEC------CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 0011123 2333332 3589999999975 7899988877766 56799999999999999999999998
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeC
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRK 258 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~ 258 (358)
.+.. ..++. ++|++++|++|+++|+. ||+++.++
T Consensus 184 ~~~~-----~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 184 TPVL-----CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred cccc-----CChhhcCCCEEEECchhcccccccceeEEEEeCC
Confidence 6643 23455 89999999999997653 56666543
No 167
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.81 E-value=1.7e-18 Score=162.69 Aligned_cols=266 Identities=18% Similarity=0.164 Sum_probs=170.3
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC-hH
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SP 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG-t~ 108 (358)
+.+.|..+.+. +||.+++++.++..... .|+. ....++ |+.++++++++++ .+.+++| ++
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--~y~~-------~~~~~l----r~~ia~~~~~~~~----~i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKLH--RYPD-------PDPAEL----KQALADYYGVDPE----QILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHhh--cCCC-------CCHHHH----HHHHHHHhCcChH----HEEEcCCHHH
Confidence 35666665543 48899999987653211 2221 112344 4778899998764 2445655 46
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.+++++||+|+++.|.|+.+. ..+...|.+ ++.++.+ +++.+|++++++++.+ ++++|+++
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~---------~~~~~~g~~--~~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~l~ 149 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTYSMYE---------ISAKIHGAE--VVKVPLD-EDGQLDLEDILVAIDD-KPKLVFLC 149 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCHHHHH---------HHHHHcCCe--EEEeccC-CCCCCCHHHHHHhcCC-CCCEEEEe
Confidence 888888888999999999998765322 122345554 4445544 2477999999998754 78888888
Q ss_pred CCCCC--CccchHHHHHHHHHh--CCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCC--CCCeeEEEEeCCC
Q 018318 189 GSAYP--RDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLR--GPRAGMIFYRKGP 260 (358)
Q Consensus 189 ~~~~~--~~~~l~~i~~la~~~--g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~--g~~gG~i~~~~~~ 260 (358)
+++|+ ...+++++.++|+.+ |+++++|++|+ ++...+....... ..+++++|++|+++ |++.|++++++
T Consensus 150 ~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-- 226 (346)
T TIGR01141 150 SPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA-- 226 (346)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH--
Confidence 77766 567889999998877 99999999975 3332111000111 23477889999973 55679999876
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHhhC-Cceeee
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGK-GYSLVT 338 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~ 338 (358)
++.+.+.....+. +.+.....+ +...+... .+.+..+++.++++++++.|.+. |+++.+
T Consensus 227 -------------~~~~~~~~~~~~~---~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 287 (346)
T TIGR01141 227 -------------EIIDALNKVRAPF---NLSRLAQAA---AIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVYP 287 (346)
T ss_pred -------------HHHHHHHhccCCC---CCCHHHHHH---HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEECC
Confidence 4555554432221 112222222 22222222 25677788899999999999987 888653
Q ss_pred CCCcceEEEEEcC
Q 018318 339 GGTENHLVLWDLR 351 (358)
Q Consensus 339 ~~~~~~~~~v~~~ 351 (358)
..+..+|+++.
T Consensus 288 --~~g~~~~~~~~ 298 (346)
T TIGR01141 288 --SDANFVLIRFP 298 (346)
T ss_pred --CcCCEEEEecC
Confidence 34667888764
No 168
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=7.5e-18 Score=151.70 Aligned_cols=271 Identities=21% Similarity=0.195 Sum_probs=167.3
Q ss_pred ccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHH
Q 018318 38 ASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT 115 (358)
Q Consensus 38 a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~ 115 (358)
.|.|. +.|+++++|.+.-. . +..-|+..+....+| +++++++|... .++++|||+||..++.
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-~------~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-V------GDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLALA 68 (342)
T ss_pred ccCccCCCCHHHHHHHHhccc-c------CCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHHHH
Confidence 34443 47999999986531 1 122355668888888 78999999843 4778999999999999
Q ss_pred hhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc------CCcEEEEcC
Q 018318 116 AVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF------RPKLIICGG 189 (358)
Q Consensus 116 a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~------~~~~v~~~~ 189 (358)
+.++||+.|++-.-.|-.. ...| .+...+.. ..++.. +..+|.+++|+++..++.. +|.+++.++
T Consensus 69 ~~~~~~~~vi~~~~aHi~~------~E~G-a~~~~~~~-~~~~~~-~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~ 139 (342)
T COG2008 69 AHCQPGESVICHETAHIYT------DECG-APEFFGGG-QKLPIV-PGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENT 139 (342)
T ss_pred HhcCCCCeEEEecccccee------cccC-cHHHHcCC-ceeccC-CCCCCCcCHHHHHHhhcCCCcccCCCceEEEeec
Confidence 9999999999987544211 1111 12223211 122221 2257899999999988632 133444443
Q ss_pred C-CCCCcc---chHHHHHHHHHhCCEEEEechhhhh-hhhccccCCCCC-cccEEEecCCccCCCCCeeEEEEeCCCCCC
Q 018318 190 S-AYPRDW---DYARFRAVADKCGALLLCDMAHISG-LVAAQEAANPFE-YCHIVTTTTHKSLRGPRAGMIFYRKGPKPP 263 (358)
Q Consensus 190 ~-~~~~~~---~l~~i~~la~~~g~~lvvD~a~~~g-~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~ 263 (358)
. ..|++. .|++|.++||+||+.|++|.|...- ++..+.-...+. ++|+++++++|.++.|-|.+++++.
T Consensus 140 ~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~----- 214 (342)
T COG2008 140 ATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR----- 214 (342)
T ss_pred cCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCH-----
Confidence 3 236544 4678889999999999999986533 222221011223 8999999999997655556666666
Q ss_pred CCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhC-CceeeeCCC
Q 018318 264 KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGK-GYSLVTGGT 341 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~ 341 (358)
++.++++.+..-.-+ ......-++++...++++. +.....+-++++++|.+.|.+. |+++..+ .
T Consensus 215 ----------~~~~~a~~~rK~~Gg---l~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-~ 280 (342)
T COG2008 215 ----------DFAKRARRWRKRAGG---LMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP-V 280 (342)
T ss_pred ----------HHHHHHHHHHHHhcc---cHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC-C
Confidence 344443332211101 1111111222233333333 2333444455599999999955 9999874 7
Q ss_pred cceEEEEEcCC
Q 018318 342 ENHLVLWDLRP 352 (358)
Q Consensus 342 ~~~~~~v~~~~ 352 (358)
.++.+.+++..
T Consensus 281 ~tN~vf~~l~~ 291 (342)
T COG2008 281 ETNMVFVRLPE 291 (342)
T ss_pred cccEEEEECCh
Confidence 88899998864
No 169
>PLN02187 rooty/superroot1
Probab=99.80 E-value=1.3e-17 Score=162.02 Aligned_cols=288 Identities=12% Similarity=0.069 Sum_probs=171.8
Q ss_pred cceeEecc-CC-----CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC--CCCCCCCccccc
Q 018318 32 RGIELIAS-EN-----FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH--LDPTQWGVNVQP 103 (358)
Q Consensus 32 ~~~~l~a~-~~-----~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g--~~~~~~~~~v~~ 103 (358)
..+.|..+ ++ .+++++.+++.+.+......+|.. ......+.+.+.+++.+.+| ++++ .|++
T Consensus 67 ~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lR~aiA~~~~~~~~~~~~~~----~I~i 136 (462)
T PLN02187 67 TILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGP------GAGILPARRAVADYMNRDLPHKLTPE----DIFL 136 (462)
T ss_pred CeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCChHHHHHHHHHHHHHhcCCCCCcc----cEEE
Confidence 45666655 23 235788888877664332222322 12233454444455554444 3443 3555
Q ss_pred cCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCC
Q 018318 104 YSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRP 182 (358)
Q Consensus 104 ~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~ 182 (358)
++| ++|+..++.++++|||+|+++.|.|..+.. .+...|+.+..+++. ..+++.+|++++++++++ ++
T Consensus 137 t~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~---------~~~~~g~~~~~~~l~-~~~~~~~d~~~l~~~~~~-~~ 205 (462)
T PLN02187 137 TAGCNQGIEIVFESLARPNANILLPRPGFPHYDA---------RAAYSGLEVRKFDLL-PEKEWEIDLEGIEAIADE-NT 205 (462)
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH---------HHHHcCCEEEEEeCc-cccCCccCHHHHHHhcCC-Cc
Confidence 666 569999999999999999999998875421 234456654444442 123578999999998864 67
Q ss_pred cEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC---c--ccEEEecCCccC--CCCC
Q 018318 183 KLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE---Y--CHIVTTTTHKSL--RGPR 250 (358)
Q Consensus 183 ~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~---~--~d~~~~s~~K~l--~g~~ 250 (358)
+++++++|+||+ .. .+++|.++|++||+++|+|+++ ..+.+.+....++. . --+++.|++|.+ +|.|
T Consensus 206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y-~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlR 284 (462)
T PLN02187 206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVY-DRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWK 284 (462)
T ss_pred EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCceeHHHhccCCcEEEEecchhhcCCccce
Confidence 888888888873 33 4889999999999999999995 45444321111221 1 136788999985 6788
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCC-CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (358)
.||++++++. .+ .++.+.+....... ...+++.....++..++.......++..++.+.++++++.+.|
T Consensus 285 iG~~v~~~p~--------~~--~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L 354 (462)
T PLN02187 285 IGWIALNDPE--------GV--FETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRL 354 (462)
T ss_pred eEEEEecCch--------hH--HHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999985420 00 01112232221111 1112233333444444432111234677788889999999999
Q ss_pred hhCCcee-eeCCCcceEEEEEcC
Q 018318 330 TGKGYSL-VTGGTENHLVLWDLR 351 (358)
Q Consensus 330 ~~~G~~~-~~~~~~~~~~~v~~~ 351 (358)
++.+... ...+..+..+|+++.
T Consensus 355 ~~~~~~~~~~~P~gg~fl~~~l~ 377 (462)
T PLN02187 355 KDIPCVVCPKKPESCTYLLTKLE 377 (462)
T ss_pred hhCCCCcCCCCCCEeEEEEeecC
Confidence 9875322 222455667888764
No 170
>PRK07324 transaminase; Validated
Probab=99.80 E-value=5.7e-18 Score=160.65 Aligned_cols=233 Identities=18% Similarity=0.168 Sum_probs=146.7
Q ss_pred HHHHHhcC-CCCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc
Q 018318 84 SRALQTFH-LDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (358)
Q Consensus 84 ~~la~~~g-~~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 161 (358)
+.++++++ ++++ .|++++| ++|+..++.++++|||+|++..|.|..+.. .++..|..+ +.++.
T Consensus 69 ~~ia~~~~~~~~~----~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---------~~~~~g~~v--~~v~~ 133 (373)
T PRK07324 69 EAVASLYQNVKPE----NILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYD---------IPESLGAEV--DYWQL 133 (373)
T ss_pred HHHHHHhcCCChh----hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH---------HHHHcCCEE--EEEec
Confidence 56677664 5553 2444555 579999999999999999999887765431 234456544 44444
Q ss_pred CCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--
Q 018318 162 NSS-TGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-- 233 (358)
Q Consensus 162 ~~~-~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-- 233 (358)
+.+ ++.+|++++++++.+ ++|+|++++++|| ...+ +++|+++|++||+++++|+++ .++.+.+..+...+
T Consensus 134 ~~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y-~~l~~~~~~~s~~~~~ 211 (373)
T PRK07324 134 KEENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVY-RPLDEDGSTPSIADLY 211 (373)
T ss_pred ccccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccc-cccccCCCCCChhhcc
Confidence 433 356899999998764 7899988888877 3445 889999999999999999994 45544322221112
Q ss_pred cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH
Q 018318 234 YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF 311 (358)
Q Consensus 234 ~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~ 311 (358)
.-.+.+.|++|++ +|.|.|++++++ ++.+.+.........+.+.....++ ..++... +..+
T Consensus 212 ~~~I~~~s~SK~~~~~G~RiG~i~~~~---------------~li~~~~~~~~~~~~~~~~~~q~~a-~~~l~~~-~~~l 274 (373)
T PRK07324 212 EKGISTNSMSKTYSLPGIRVGWIAANE---------------EVIDILRKYRDYTMICAGVFDDMLA-SLALEHR-DAIL 274 (373)
T ss_pred CCEEEEecchhhcCCccceeEEEecCH---------------HHHHHHHHHhCcEEecCChHHHHHH-HHHHcCH-HHHH
Confidence 2247888999986 477889999865 4555554432221111111121221 2233211 1123
Q ss_pred HHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 312 KAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 312 ~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
+...+...++++.+.+.|.+. ++++.. +..+...|+.+.
T Consensus 275 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~-p~gg~~~~i~~~ 314 (373)
T PRK07324 275 ERNRKIVRTNLAILDEWVAKEPRVSYVK-PKAVSTSFVKLD 314 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEC-CCceEEEEEEeC
Confidence 455666777888888989876 676654 344445566654
No 171
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=1.2e-17 Score=157.17 Aligned_cols=267 Identities=15% Similarity=0.142 Sum_probs=171.6
Q ss_pred ceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HH
Q 018318 33 GIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PA 109 (358)
Q Consensus 33 ~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a 109 (358)
.+.|..+++. +|+.+++++.+.+.......|+. +....+ |+.++++++++++ .|++++|+ ++
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~-------~~~~~l----r~~ia~~~~~~~~----~i~it~G~~~~ 88 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD-------PTAEKL----REELARYCSVVPT----NIFVGNGSDEI 88 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC-------ccHHHH----HHHHHHHhCCCcc----cEEEecCHHHH
Confidence 3556665554 47999999877654221112221 112334 4778888998764 35567775 57
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
+..++.++++|||+|++..|.|..+.. ..+..|+. +++++.+ +++.+|++++++++++.++++|++++
T Consensus 89 l~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~~~~~~~k~v~l~~ 156 (351)
T PRK14807 89 IHLIMLAFINKGDVVIYPHPSFAMYSV---------YSKIAGAV--EIPVKLK-EDYTYDVGSFIKVIEKYQPKLVFLCN 156 (351)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHHH---------HHHHcCCe--EEEeecC-CCCCCCHHHHHHHhhccCCCEEEEeC
Confidence 888888889999999999987764321 12345654 4444444 35789999999999755789998888
Q ss_pred CCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccC--CCCCeeEEEEeCCCCCC
Q 018318 190 SAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPP 263 (358)
Q Consensus 190 ~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~ 263 (358)
++|| ...+.+++.++|++++.++|+|+++. ++. .......++ .-.+++.|++|.+ +|.|.|++++++
T Consensus 157 p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~----- 229 (351)
T PRK14807 157 PNNPTGSVIEREDIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE----- 229 (351)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH-----
Confidence 8876 56789999999999889999999963 332 111111122 2348889999986 577889999876
Q ss_pred CCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCc
Q 018318 264 KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTE 342 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~ 342 (358)
++.+.+.....+. ..+.....++..++ ....+++..++..++++++.+.|++. |+++.+ ..
T Consensus 230 ----------~~~~~~~~~~~~~---~~~~~~q~~~~~~l---~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~--~~ 291 (351)
T PRK14807 230 ----------NILKYLNLVKSPY---NINSLSQVIALKVL---RTGVLKERVNYILNERERLIKELSKIPGIKVYP--SK 291 (351)
T ss_pred ----------HHHHHHHHccCCC---CcCHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECc--CC
Confidence 3555454322221 11222222222222 22234666677788888899999875 887653 34
Q ss_pred ceEEEEEcC
Q 018318 343 NHLVLWDLR 351 (358)
Q Consensus 343 ~~~~~v~~~ 351 (358)
+..+|+.+.
T Consensus 292 ~~~~~i~~~ 300 (351)
T PRK14807 292 TNFILVKFK 300 (351)
T ss_pred ccEEEEEcC
Confidence 556888763
No 172
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.80 E-value=2.3e-17 Score=157.91 Aligned_cols=298 Identities=14% Similarity=0.099 Sum_probs=181.9
Q ss_pred ccccccchHHHHHHHHHHHHh-----hcceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHH
Q 018318 10 SSLETVDPEIHDLIEKEKRRQ-----CRGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLC 82 (358)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~ 82 (358)
+++.+++.+....+.+.+... ++.+.|..+++ .+++.+.+++.+.+... ..|+.. .| ..++.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~~~---~G---~~~lr~~i 74 (396)
T PRK09147 3 PRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYPTT---AG---LPALREAI 74 (396)
T ss_pred chhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCCCC---CC---CHHHHHHH
Confidence 345566666666555544422 35666766554 24778888887654321 123321 12 22444455
Q ss_pred HHHHHHhcCCC---CCCCCccccccCC-hHHHHHHHHhhcCC---CCeEEEecCCCCccccccccccCCcccccccceeE
Q 018318 83 RSRALQTFHLD---PTQWGVNVQPYSG-SPANFAAYTAVLEP---HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFE 155 (358)
Q Consensus 83 ~~~la~~~g~~---~~~~~~~v~~~sG-t~a~~~~l~a~~~~---gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 155 (358)
.+++.+.+|.+ +++ .|+.++| ++|+..++.++++| ||.|+++.|.|..+.. .+...|+.+
T Consensus 75 a~~~~~~~g~~~~~~~~---~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g~~~- 141 (396)
T PRK09147 75 AAWLERRYGLPALDPAT---QVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG---------AALLAGAEP- 141 (396)
T ss_pred HHHHHHHhCCCcCCccc---eEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH---------HHHhcCCEE-
Confidence 57777777854 321 3555666 46999999999999 9999999988764321 234566544
Q ss_pred EeecccCCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccC
Q 018318 156 SLPYKVNSS-TGYIDYDKLEEKALDFRPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (358)
Q Consensus 156 ~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~ 229 (358)
++++.+++ ++.+|++++++.+.+ +++++++++++||+ . ..+++|.++|++|++++|+|+++. .+.+.+..+
T Consensus 142 -~~vp~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~ 218 (396)
T PRK09147 142 -YFLNCDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYS-EIYFDEAAP 218 (396)
T ss_pred -EEeccCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccc-ccccCCCCC
Confidence 44444433 457999999988764 78999888888883 3 357899999999999999999954 333322111
Q ss_pred -CC-C----C-c-----ccEEEecCCcc--CCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 230 -NP-F----E-Y-----CHIVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 230 -~~-~----~-~-----~d~~~~s~~K~--l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.. + . + --+++.|++|. ++|.|.|++++++ ++.+.+........ .+.+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~---------------~l~~~~~~~~~~~~-~~~~~~~ 282 (396)
T PRK09147 219 PLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA---------------ALLKKFLLYRTYHG-CAMPPAV 282 (396)
T ss_pred CchhhhhccccCccccccEEEEeccccccCCccceeeeecCCH---------------HHHHHHHHHhhhcc-cCCCHHH
Confidence 00 1 0 1 12888999995 4677889999877 34444433211111 1122222
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
..+...++. ....+...++++++.++.+.+.|++. +.+.. +..+..+|+++.
T Consensus 283 q~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-p~~g~f~~~~~~ 334 (396)
T PRK09147 283 QAASIAAWN--DEAHVRENRALYREKFDAVTPILAPV-LDVQL-PDAGFYLWAKVP 334 (396)
T ss_pred HHHHHHHhc--chhHHHHHHHHHHHHHHHHHHHHHHh-cCCCC-CCeeEEEEEECC
Confidence 222222221 11224566777888888888888874 55432 567888999975
No 173
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.80 E-value=1.7e-17 Score=160.13 Aligned_cols=289 Identities=12% Similarity=0.042 Sum_probs=173.3
Q ss_pred cceeEeccCC------CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCC--CCCCCCccccc
Q 018318 32 RGIELIASEN------FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL--DPTQWGVNVQP 103 (358)
Q Consensus 32 ~~~~l~a~~~------~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~--~~~~~~~~v~~ 103 (358)
+.+.|..++. .+++.+.+++.+.+......+|+.. ....++.+.+.+++.+..|. +++ .|+.
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~------~G~~~lr~aia~~~~~~~~~~~~~~----~v~i 122 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTC------VGLLPARRAIAEYLSRDLPYELSTD----DIYL 122 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCC------ccCHHHHHHHHHHHhhccCCCCChh----hEEE
Confidence 4566655432 3478899998877754322234321 22334544444555444343 332 2445
Q ss_pred cCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCC
Q 018318 104 YSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRP 182 (358)
Q Consensus 104 ~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~ 182 (358)
++| ++|+..++.++++|||+|+++.|.|..+.. ...+.|..+..+.+. .++++.+|++++++++++ ++
T Consensus 123 t~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~---------~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~-~~ 191 (430)
T PLN00145 123 TAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEA---------RAVFSGLEVRHFDLL-PERGWEVDLEGVEALADE-NT 191 (430)
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH---------HHHHcCCEEEEeeCC-cccCCcCCHHHHHHHhCc-Cc
Confidence 555 679999999999999999999998765321 123456544444332 123578999999998865 67
Q ss_pred cEEEEcCCCCCC--ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---Cc--ccEEEecCCccC--CCCC
Q 018318 183 KLIICGGSAYPR--DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY--CHIVTTTTHKSL--RGPR 250 (358)
Q Consensus 183 ~~v~~~~~~~~~--~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~~--~d~~~~s~~K~l--~g~~ 250 (358)
+++++++|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+....++ .. .-+++.|++|.+ +|.|
T Consensus 192 ~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~R 270 (430)
T PLN00145 192 VAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVY-DHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWR 270 (430)
T ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccc-hhhccCCCCccchhhhcccCcEEEEeccccccCCCCee
Confidence 888888888873 444 889999999999999999994 4444432111222 21 237889999984 6888
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (358)
-||++.++... .+....+...+.... .....++.....++..++..-.+..++..+++++++++++.+.|+
T Consensus 271 lG~iv~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~ 341 (430)
T PLN00145 271 LGWIATCDPNG-------ILKETKVVDSIRNYL--NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIK 341 (430)
T ss_pred EEEEEEecchh-------hhhhhHHHHHHHHHh--cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999854200 000000112222221 111122222233333333321112347778888999999999998
Q ss_pred hC-CceeeeCCCcceEEEEEcC
Q 018318 331 GK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 331 ~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
+. |+++...++.+..+|+.+.
T Consensus 342 ~~~g~~~~~~P~ga~y~~v~l~ 363 (430)
T PLN00145 342 EIKCITCPHKPEGSMFVMVKLD 363 (430)
T ss_pred cCCCCCCCcCCCeeeEEEeccC
Confidence 86 7775433567778998874
No 174
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=4.8e-18 Score=162.15 Aligned_cols=160 Identities=18% Similarity=0.219 Sum_probs=121.6
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+.+..|| +.++++.|.+. .+.++||+.|+.+++.+++++||+|+++.+.|++-.... . ..+...
T Consensus 59 ~nPtv~~lE----~~la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~--~---~~l~~~ 124 (432)
T PRK06702 59 GNPTLAAFE----QKLAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLF--G---VSLRKL 124 (432)
T ss_pred CCcHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH--H---HHHHHC
Confidence 457788898 78999999886 377899999999999999999999999998886532110 0 012334
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+ ++.+++ ..+|+++++++|.+ ++|+|+++++.+| .+.|+++|+++||++|+++++|++.+... .
T Consensus 125 Gi--~v~~vd-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~-----~ 191 (432)
T PRK06702 125 GI--DVTFFN-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPY-----L 191 (432)
T ss_pred CC--EEEEEC-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchh-----h
Confidence 54 444443 35799999999975 7899988877777 35699999999999999999999854332 2
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEe
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYR 257 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~ 257 (358)
..|++ |+|+++.|++|+++|.. ||+++..
T Consensus 192 ~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~ 224 (432)
T PRK06702 192 CQAFEHGANIIVHSTTKYIDGHASSLGGIVIDG 224 (432)
T ss_pred CChhhcCCCEEEEccccccCCCcceeceEEEeC
Confidence 34566 89999999999997753 3666543
No 175
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.80 E-value=1.6e-18 Score=163.45 Aligned_cols=271 Identities=7% Similarity=-0.040 Sum_probs=168.2
Q ss_pred ceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCcccc-ccCChHHHH
Q 018318 33 GIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQ-PYSGSPANF 111 (358)
Q Consensus 33 ~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~-~~sGt~a~~ 111 (358)
...+++++..++++|++++......... . .++ ..++.+.++ ++++.++++++++.+. ..++ +.|||.++.
T Consensus 4 ~~~f~pGP~~~~~~v~~a~~~~~~~~~~---~--~hr-~~~f~~~~~-~~r~~l~~l~~~~~~~--~v~f~~gs~T~a~~ 74 (361)
T TIGR01366 4 DGRFGSGPSKVRLEQLQALTTTAASLFG---T--SHR-QAPVKNLVG-RVREGLAELFSLPDGY--EVILGNGGATAFWD 74 (361)
T ss_pred CCcccCCCcCCCHHHHHHHHhcCccccc---c--CcC-ChHHHHHHH-HHHHHHHHHhCCCCCc--eEEEECCchhHHHH
Confidence 4578899999999999998743211110 0 111 235666665 7899999999995431 1233 355788999
Q ss_pred HHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc--cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 112 AAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT--SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 112 ~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
+++.+++.+ +.+++...+|+..+.+. .... ...+..+.. + .+..++. .+. .++++|++++
T Consensus 75 ~~~~~l~~~-~~l~i~~G~~~~~~~~~--------a~~~~~~~~~~~~~~--~-~~~~~~~-----~~~-~~~~lV~~~h 136 (361)
T TIGR01366 75 AATFGLIEK-KSLHLSFGEFSSKFAKA--------VKLAPWLGEPIIVTA--D-PGSAPEP-----QAD-PGVDVIAWAH 136 (361)
T ss_pred HHHHhcccc-cccEEecCHHHHHHHHH--------HHhhhccCCceEEec--C-CCCCCCC-----ccC-CCCCEEEEcc
Confidence 999998743 33334444343322111 1111 112333333 2 1233443 222 3689888765
Q ss_pred CC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeCCCC-CCC-
Q 018318 190 SA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPK-PPK- 264 (358)
Q Consensus 190 ~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~-~~~- 264 (358)
.+ +|...|+++| +|++|++++||++|++|.. +.+++.+|++++|+||++++|.| ++++.+++.. ++.
T Consensus 137 ~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~-----~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~ 208 (361)
T TIGR01366 137 NETSTGVAVPVRRP---EGSDDALVVIDATSGAGGL-----PVDIAETDVYYFAPQKNFASDGGLWLAIMSPAALERIEA 208 (361)
T ss_pred cCCccceecccccc---cccCCCeEEEEcCccccCC-----CCCHHHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhc
Confidence 44 5678898887 5899999999999998864 23344689999999999877766 4445555432 222
Q ss_pred --CCCCCCccc-cHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHhhCC-ceeee
Q 018318 265 --KGQPEGAVY-DFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKG-YSLVT 338 (358)
Q Consensus 265 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~G-~~~~~ 338 (358)
.++..+.+| ++...+.......+.++++...+.++..+++.+... +++.+.+++.+.+++++++|.+.+ ++++.
T Consensus 209 ~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~ 287 (361)
T TIGR01366 209 IAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFV 287 (361)
T ss_pred ccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 222222211 222222221112334567777788999999988765 478888999999999999999997 56653
No 176
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.3e-18 Score=164.35 Aligned_cols=214 Identities=13% Similarity=0.062 Sum_probs=147.2
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCccccc
Q 018318 70 GGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISA 149 (358)
Q Consensus 70 ~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (358)
.+.+.++.|| ++++.+-+.+. .++++||+.|+..++.++++|||+|+++.+.|++..... . ..+..
T Consensus 61 ~gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~--~---~~l~~ 126 (395)
T PRK05967 61 RGTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFC--D---TMLKR 126 (395)
T ss_pred CCChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHH--H---HHHHh
Confidence 4667788887 77888877654 377888999999999999999999999998887653210 0 01233
Q ss_pred ccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccc
Q 018318 150 TSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQE 227 (358)
Q Consensus 150 ~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~ 227 (358)
.|+. +..++. -+.+.+++++++ ++|+|++++++|+ ...|+++|+++||++|+++++|++++.+..
T Consensus 127 ~Gi~--v~~vd~------~~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~---- 193 (395)
T PRK05967 127 LGVE--VEYYDP------EIGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY---- 193 (395)
T ss_pred cCeE--EEEeCC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee----
Confidence 4543 333432 135779999875 7899999888776 467999999999999999999999765432
Q ss_pred cCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHH
Q 018318 228 AANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVAL 303 (358)
Q Consensus 228 ~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al 303 (358)
..|++ |+|+++.|.+|+++|.. +|+++.++ ++.+.+..... . .|... ....+ +..+
T Consensus 194 -~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~---------------~~~~~l~~~~~-~-~G~~~-~p~da-~l~~ 253 (395)
T PRK05967 194 -FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE---------------KCWPQLLEAHG-T-LGLCA-GPDDT-YQIL 253 (395)
T ss_pred -cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH---------------HHHHHHHHHHH-H-cCCCC-CHHHH-HHHH
Confidence 24566 99999999999987632 57665544 23233322111 1 12211 11111 2222
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 304 KQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+-+ +-+..+++++.+|+..++++|+++
T Consensus 254 rgl--~Tl~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 254 RGL--RTMGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred cCc--ccHHHHHHHHHHHHHHHHHHHHhC
Confidence 222 346788999999999999999987
No 177
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=2.8e-18 Score=164.54 Aligned_cols=160 Identities=21% Similarity=0.143 Sum_probs=119.0
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+..+.|| +.++++.|.+. .++++||+.|+.+++.+++++||+|++....|++.+.... ..+...
T Consensus 67 ~~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~-----~~l~~~ 132 (436)
T PRK07812 67 MNPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFH-----YTLPKL 132 (436)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHH-----HHhhcC
Confidence 446677888 78999999886 3778999999999999999999999999887765431100 011223
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
| ++++.++ + ..|++++++++++ ++++|++.+++|+ .+.|+++|.++||++|++++||++|+.+..
T Consensus 133 G--i~v~~vd-d----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~----- 199 (436)
T PRK07812 133 G--IEVSFVE-D----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL----- 199 (436)
T ss_pred e--EEEEEEC-C----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 3 3444443 2 2489999998874 7899988877655 678999999999999999999999987643
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEe
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYR 257 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~ 257 (358)
..+++ ++|+++.|+||+++|.. ||+++..
T Consensus 200 ~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~ 232 (436)
T PRK07812 200 IRPLEHGADIVVHSATKYLGGHGTAIAGVIVDG 232 (436)
T ss_pred CCchhcCCCEEEEecccccCCCCCeEEEEEEcC
Confidence 23455 89999999999997653 3444433
No 178
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.80 E-value=7.9e-18 Score=164.56 Aligned_cols=240 Identities=13% Similarity=0.073 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHhcC----CCCCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccc-c
Q 018318 76 DEIENLCRSRALQTFH----LDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS-A 149 (358)
Q Consensus 76 ~~le~~~~~~la~~~g----~~~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~-~ 149 (358)
.+|.+.+.+++.+.+| ++++ .|+.++| ++|+..++.++++|||.|+++.|.|+++.. .+. .
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe----~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~---------~~~~~ 163 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPE----RVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR---------DLRWR 163 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChh----hEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH---------HHHhh
Confidence 3555556677777766 5554 2445665 569999999999999999999999886531 122 2
Q ss_pred ccceeEEeecccCC-CCCCCCHHHHHHHHhh-----cCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechh
Q 018318 150 TSIYFESLPYKVNS-STGYIDYDKLEEKALD-----FRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAH 218 (358)
Q Consensus 150 ~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~-----~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~ 218 (358)
.|+. +++++.+. +++.+|++++++++++ .++|+|++++|+||+ .. .+++|.++|++||+++|+|+++
T Consensus 164 ~G~~--vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY 241 (496)
T PLN02376 164 TGVE--IIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIY 241 (496)
T ss_pred CCCE--EEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCc
Confidence 4554 44444432 3568999999876532 357888888888873 33 4778899999999999999996
Q ss_pred hhhhhhccccCCCC-------C--c--cc--EEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhc
Q 018318 219 ISGLVAAQEAANPF-------E--Y--CH--IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV 283 (358)
Q Consensus 219 ~~g~~~~~~~~~~~-------~--~--~d--~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (358)
+ .+.+.+....++ + + .+ +++.|++|.| +|.|.|+++++++ .+...+....
T Consensus 242 ~-~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~--------------~l~~~~~~~~ 306 (496)
T PLN02376 242 A-ATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND--------------SVVSCARKMS 306 (496)
T ss_pred c-ccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH--------------HHHHHHHHHh
Confidence 4 333322111111 1 1 12 3578999986 5788899998654 3444333221
Q ss_pred CCCCcCCCChhHHHHHHHHHHHhccHHH-H----HHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 284 FPSLQGGPHNHQIGALAVALKQASTPAF-K----AYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 284 ~~~~~~~~~~~~~~al~~al~~~~~~~~-~----~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
... ..+.....++...+ ...++ + ..++++.+..+.+.+.|.+.|+++.. +..+..+|+++.+
T Consensus 307 ~~~---~vs~~~Q~a~~~~L---~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~-~~aG~flwi~l~~ 373 (496)
T PLN02376 307 SFG---LVSSQTQLMLASML---SDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLT-SNAGLFAWMDLRH 373 (496)
T ss_pred hcC---CCCHHHHHHHHHHh---CChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCceEEEEEEchh
Confidence 111 11111122222222 22223 2 33556677788888999988988765 5677899999964
No 179
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=3.7e-18 Score=163.91 Aligned_cols=160 Identities=20% Similarity=0.164 Sum_probs=120.2
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+....|| +.++++.|.+. .++++||+.|+..++.+++++||+|++..+.|++.+... . ..+...
T Consensus 62 ~~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~--~---~~~~~~ 127 (431)
T PRK08248 62 MNPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLF--A---HTLPKL 127 (431)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHH--H---HHHHhC
Confidence 456677888 77999999775 477899999999999999999999999998876543110 0 012234
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+ ++++++. .|++++++++++ ++++|++++++|| ...|+++|+++||++|+++|+|++++.+..
T Consensus 128 Gv--~v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~----- 193 (431)
T PRK08248 128 GI--TVKFVDP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL----- 193 (431)
T ss_pred CE--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-----
Confidence 54 4455532 489999999875 7899988877766 577999999999999999999999865432
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeC
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRK 258 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~ 258 (358)
..+++ ++|+++.|+||+++|+. ||+++.+.
T Consensus 194 ~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 194 LRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred CChhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 23445 89999999999997763 45555443
No 180
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.80 E-value=1.7e-17 Score=159.53 Aligned_cols=285 Identities=20% Similarity=0.173 Sum_probs=171.7
Q ss_pred cceeEeccCC------CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC--------CCCCCC
Q 018318 32 RGIELIASEN------FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH--------LDPTQW 97 (358)
Q Consensus 32 ~~~~l~a~~~------~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g--------~~~~~~ 97 (358)
..+.|..+.. .+++.+.+++.+.+......+|+.. ....+|.+.+.+++.+.++ ++++
T Consensus 34 ~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~------~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~-- 105 (412)
T PTZ00433 34 SIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPT------VGSPEAREAVATYWRNSFVHKESLKSTIKKD-- 105 (412)
T ss_pred CeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCC------CCcHHHHHHHHHHHHhhccccccccCCCChh--
Confidence 4566665432 3578888888776543111233321 1233454444455554332 3343
Q ss_pred CccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHH
Q 018318 98 GVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEE 175 (358)
Q Consensus 98 ~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~ 175 (358)
.|+.++| ++|+..++.+++++||+|++..|+|..+.. .+...|+.+..+++ +. .++.+|++++++
T Consensus 106 --~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g~~~~~i~~--~~~~~~~~d~~~l~~ 172 (412)
T PTZ00433 106 --NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET---------VCKAYGIEMRFYNC--RPEKDWEADLDEIRR 172 (412)
T ss_pred --hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH---------HHHHcCCEEEEEec--CccccCcCCHHHHHH
Confidence 3445665 569999999999999999999998865431 23445654444443 32 256899999999
Q ss_pred HHhhcCCcEEEEcCCCCCC-----ccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCC---CC-c-ccEEEecCCcc
Q 018318 176 KALDFRPKLIICGGSAYPR-----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FE-Y-CHIVTTTTHKS 245 (358)
Q Consensus 176 ~l~~~~~~~v~~~~~~~~~-----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~---~~-~-~d~~~~s~~K~ 245 (358)
++.+ ++++|++++++||+ ..++++|.++|++||+++|+|+++. .+.+.+....+ +. . .-+++.|++|.
T Consensus 173 ~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 250 (412)
T PTZ00433 173 LVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA-GMVFNGATFTSVADFDTTVPRVILGGTAKN 250 (412)
T ss_pred Hhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc-ccccCCCCccchhhccCCCceEEEccchhh
Confidence 8865 68988888888873 2357888999999999999999954 55443211111 11 1 23778999997
Q ss_pred C--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 018318 246 L--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAV 323 (358)
Q Consensus 246 l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 323 (358)
+ +|.|.|++++.+... ... ++.+.+....... . +.+.....++..++.......+++.++++.++++
T Consensus 251 ~~~pGlRlG~~i~~~p~~-------~~~--~~~~~~~~~~~~~-~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~ 319 (412)
T PTZ00433 251 LVVPGWRLGWLLLVDPHG-------NGG--DFLDGMKRLGMLV-C-GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAM 319 (412)
T ss_pred cCCCCeeEEEEEEeCCcc-------cHH--HHHHHHHHHhhcc-C-CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 5 677889999732100 000 2333333321111 1 1222222222333322111224666778888899
Q ss_pred HHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 324 ALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 324 ~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
.+.+.|++. |+++.. +..+..+|+.+.
T Consensus 320 ~l~~~L~~~~~~~~~~-p~gg~f~~~~l~ 347 (412)
T PTZ00433 320 VLYNHIGECIGLSPTM-PRGSMFLMSRLD 347 (412)
T ss_pred HHHHHHhcCCCCcccC-CCeeEEEEEEec
Confidence 999999875 777654 456778898774
No 181
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.80 E-value=2.8e-17 Score=157.59 Aligned_cols=283 Identities=17% Similarity=0.117 Sum_probs=169.8
Q ss_pred cceeEeccCC------CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC-----CCCCCCCcc
Q 018318 32 RGIELIASEN------FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-----LDPTQWGVN 100 (358)
Q Consensus 32 ~~~~l~a~~~------~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g-----~~~~~~~~~ 100 (358)
+.+.|..+.. .+++.+.+++.+.+....-.+|... ....++. +.++++++ ++++ .
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~g~~~lr----~aia~~~~~~~~~~~~~----~ 97 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPT------VGALSAR----EAIASYYHNPDGPIEAD----D 97 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCC------CCCHHHH----HHHHHHHhhcCCCCCHH----H
Confidence 3466665432 3578899988776543211223211 1223444 44555554 3333 2
Q ss_pred ccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh
Q 018318 101 VQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD 179 (358)
Q Consensus 101 v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~ 179 (358)
|++++| ++|+..++.+++++||+|++..|.|..+. ..+...|..+..++++.+ +++.+|++.+++++++
T Consensus 98 i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~---------~~~~~~g~~v~~~~~~~~-~~~~~d~~~l~~~~~~ 167 (401)
T TIGR01264 98 VVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE---------TLAESMGIEVKLYNLLPD-KSWEIDLKQLESLIDE 167 (401)
T ss_pred EEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH---------HHHHHcCCEEEEeecCCc-cCCCCCHHHHHHHhcc
Confidence 444554 67999999999999999999998876432 123445654443433211 2468999999998865
Q ss_pred cCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C-cc-cEEEecCCcc--CC
Q 018318 180 FRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YC-HIVTTTTHKS--LR 247 (358)
Q Consensus 180 ~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~-~~-d~~~~s~~K~--l~ 247 (358)
++++|++++++||+ .. ++++|.++|+++|+++++|+++ ..+.+.+....++ . .. -+++.|++|. ++
T Consensus 168 -~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 245 (401)
T TIGR01264 168 -KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIY-GDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVP 245 (401)
T ss_pred -CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhh-hhhccCCcccccHHHcCCCCcEEEEccCcccCCCc
Confidence 67888888888773 32 5889999999999999999994 4554433111122 1 11 3678999997 46
Q ss_pred CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 018318 248 GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (358)
Q Consensus 248 g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~ 327 (358)
|.|.|++++++... .+. ++.+.+....... . +++.....++..++.......++..++++.++++++.+
T Consensus 246 GlRiG~iv~~~~~~-------~~~--~~~~~~~~~~~~~-~-~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~ 314 (401)
T TIGR01264 246 GWRLGWIIIHDRRG-------ILR--DIRDGLVKLSQRI-L-GPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYG 314 (401)
T ss_pred cceEEEEEecCcch-------hHH--HHHHHHHHHhhcc-C-CCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 77889999875200 000 1222222211111 1 12222223333333321122346677888888999999
Q ss_pred HHhhC-CceeeeCCCcceEEEEEcCC
Q 018318 328 YLTGK-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 328 ~L~~~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
.|++. |+++.. +..+..+|+++..
T Consensus 315 ~L~~~~~~~~~~-p~~g~f~~~~~~~ 339 (401)
T TIGR01264 315 ALAAVPGLRPVM-PSGAMYMMVGIEM 339 (401)
T ss_pred HHHhCCCCcccC-CCeeeEEEEEecc
Confidence 99987 776543 4678889999753
No 182
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.79 E-value=1e-17 Score=172.27 Aligned_cols=255 Identities=16% Similarity=0.136 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccccccCCh---HHHHHHHHhhcCC-CC----eEEEecCCCCccccccccccCCcccc
Q 018318 77 EIENLCRSRALQTFHLDPTQWGVNVQPYSGS---PANFAAYTAVLEP-HD----RIMGLDLPSGGHLTHGYYTSGGKKIS 148 (358)
Q Consensus 77 ~le~~~~~~la~~~g~~~~~~~~~v~~~sGt---~a~~~~l~a~~~~-gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~ 148 (358)
++-.++++++++++|.+. +.+..++|+ .++.+++.+++++ || +|+++..+|+++.. ++.
T Consensus 568 ~~~~~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a---------~a~ 634 (993)
T PLN02414 568 EMFEDLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA---------SAA 634 (993)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH---------HHH
Confidence 344578899999999954 223333332 4888888888866 88 89999999987652 334
Q ss_pred cccceeEEeecccCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCCC-C-CccchHHHHHHHHHhCCEEEEechhhhhhhh
Q 018318 149 ATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICGGSAY-P-RDWDYARFRAVADKCGALLLCDMAHISGLVA 224 (358)
Q Consensus 149 ~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~--~~~~v~~~~~~~-~-~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~ 224 (358)
+.|.++..+ +.+ ++|.+|+++|+++++++ ++++|++.+++| + ...|+++|+++||++|+++++|++|..++..
T Consensus 635 ~~G~~vv~v--~~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~ 711 (993)
T PLN02414 635 MCGMKIVVV--GTD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVG 711 (993)
T ss_pred HCCCEEEEe--ccC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccC
Confidence 456554444 444 47899999999999852 467777766543 3 5678999999999999999999999887643
Q ss_pred ccccCCCCC-cccEEEecCCccCCCCC-----e-eEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCC-CChh-H
Q 018318 225 AQEAANPFE-YCHIVTTTTHKSLRGPR-----A-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGG-PHNH-Q 295 (358)
Q Consensus 225 ~~~~~~~~~-~~d~~~~s~~K~l~g~~-----g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~ 295 (358)
...+.+ ++|++++|.||+|++|. | |++++++.+....++-.......+..+.+. ...+.... +... .
T Consensus 712 ---l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~-s~iGt~~~a~~g~al 787 (993)
T PLN02414 712 ---LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKT-QPLGTISAAPWGSAL 787 (993)
T ss_pred ---cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCC-CCcCCccchhhhhHH
Confidence 112334 89999999999986554 3 888888764432221000000000000010 00011010 1111 1
Q ss_pred HHHHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCC---CcceEEEEEcCC
Q 018318 296 IGALAVAL-KQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG---TENHLVLWDLRP 352 (358)
Q Consensus 296 ~~al~~al-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~---~~~~~~~v~~~~ 352 (358)
++..+.++ ..+..+++.+..++...|+.|+++.|.+ ++++.... .--|-..+++.+
T Consensus 788 ~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~ 847 (993)
T PLN02414 788 ILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRP 847 (993)
T ss_pred HHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccc
Confidence 11112222 2233355667788899999999999987 45443211 223467777763
No 183
>PRK07550 hypothetical protein; Provisional
Probab=99.79 E-value=1.1e-16 Score=152.64 Aligned_cols=281 Identities=14% Similarity=0.031 Sum_probs=169.4
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC-hH
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SP 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG-t~ 108 (358)
..+.|..++.. .++.+.+++.+.+.......|.. .....+|++.+.+++.+.+|..... ..|++++| ++
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~ 101 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGP------VEGLPELREAYAAHYSRLYGAAISP--EQVHITSGCNQ 101 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCC------CCCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence 34666655432 36778887766543211112211 1223456556667777777753211 13555666 56
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
|+..++.+++++||+|++..|.|..+.. .++..|.. +++++.++ .++.+|++++++++++ ++++|++
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g~~--~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~~ 169 (386)
T PRK07550 102 AFWAAMVTLAGAGDEVILPLPWYFNHKM---------WLDMLGIR--PVYLPCDEGPGLLPDPAAAEALITP-RTRAIAL 169 (386)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHH---------HHHhcCCE--EEEEecCCCcCCCCCHHHHHHHhcc-cCcEEEE
Confidence 9999999999999999999988765431 22445654 44445443 2456899999999975 6888877
Q ss_pred cCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCC-CCC----c-ccEEEecCCccCC--CCCeeEE
Q 018318 188 GGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAAN-PFE----Y-CHIVTTTTHKSLR--GPRAGMI 254 (358)
Q Consensus 188 ~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~-~~~----~-~d~~~~s~~K~l~--g~~gG~i 254 (358)
++++||+ .. .+++|.++|++||+++|+|++++ .+......+. .+. + -.+++.|++|.++ |.+.|++
T Consensus 170 ~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i 248 (386)
T PRK07550 170 VTPNNPTGVVYPPELLHELYDLARRHGIALILDETYR-DFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAV 248 (386)
T ss_pred eCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEee
Confidence 7777762 33 47899999999999999999954 3332211111 111 1 2367899999874 7788999
Q ss_pred EEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-C
Q 018318 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-G 333 (358)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G 333 (358)
+++++ +.+.+......... +++.....++..++..+ .+..+..++++.++++++.+.|... +
T Consensus 249 ~~~~~---------------~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 311 (386)
T PRK07550 249 VASPA---------------RIAEIEKFMDTVAI-CAPRIGQIAVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLPG 311 (386)
T ss_pred ecCHH---------------HHHHHHHHHhhccc-CCCcHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99763 33333332211111 11222222223333221 1223455667788888999999885 7
Q ss_pred ceeeeCCCcceEEEEEcCC
Q 018318 334 YSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 334 ~~~~~~~~~~~~~~v~~~~ 352 (358)
+.+. +..++.+|+.+..
T Consensus 312 ~~~~--~~g~~~~~~~~~~ 328 (386)
T PRK07550 312 WELL--ASGAYFAYVRHPF 328 (386)
T ss_pred ceeC--CCceEEEEecCCC
Confidence 7653 3467788988643
No 184
>PLN02231 alanine transaminase
Probab=99.79 E-value=3.4e-17 Score=161.16 Aligned_cols=301 Identities=11% Similarity=0.051 Sum_probs=177.9
Q ss_pred cccchHHHHHHHHHHHHhhcceeEeccCCCCCHHHHHHHhcccccCCC---CCCCCCCCCCCchhHHHHHHHHHHHHHHh
Q 018318 13 ETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS---EGMPGNRYYGGNEFIDEIENLCRSRALQT 89 (358)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~---~g~~~~~~~~~~~~~~~le~~~~~~la~~ 89 (358)
.++++..++.+...+. ....+.+-+++...|..+++++.+.+....+ .+|.. ......|.+.+.+++.+.
T Consensus 112 ~~~~~~~~r~v~~~~~-~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~------s~G~~~lReaIA~~~~~r 184 (534)
T PLN02231 112 GQQPITFFREVLALCD-HPSLLDKSETHGLFSADAIERAWQILDQIPGRATGAYSH------SQGIKGLRDAIAAGIEAR 184 (534)
T ss_pred CCCccHHHHHHHHhcc-CCccCCCCCccccCCHHHHHHHHHHHHhcCCccccCcCC------CCCcHHHHHHHHHHHHhc
Confidence 3444444444433322 1233445445555677777777665543221 12332 223345555556777766
Q ss_pred cCCCCCCCCccccccCCh-HHHHHHHHhhc-CCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CC
Q 018318 90 FHLDPTQWGVNVQPYSGS-PANFAAYTAVL-EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TG 166 (358)
Q Consensus 90 ~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~ 166 (358)
.|.+.+. ..|+.++|+ +|+..++.+++ .+||.|+++.|.|..+.. .+...|.. +++++.+++ ++
T Consensus 185 ~g~~~~p--e~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~---------~~~~~g~~--~v~~~l~~~~~~ 251 (534)
T PLN02231 185 DGFPADP--NDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSA---------SIALHGGT--LVPYYLDEATGW 251 (534)
T ss_pred cCCCCCc--ccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHH---------HHHHcCCE--EEEEecCcccCC
Confidence 6643211 135566665 69999999987 489999999998876531 23455654 444444433 46
Q ss_pred CCCHHHHHHHHhhc-----CCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhc-cccCCCCC--
Q 018318 167 YIDYDKLEEKALDF-----RPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAA-QEAANPFE-- 233 (358)
Q Consensus 167 ~id~~~l~~~l~~~-----~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~-~~~~~~~~-- 233 (358)
.+|+++|++++++. ++|++++++|+||+ . ..+++|.++|++||+++|+|+++ ..+.+. +....++.
T Consensus 252 ~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY-~~l~y~~~~~~~s~~~~ 330 (534)
T PLN02231 252 GLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVY-QENVYVPDKKFHSFKKV 330 (534)
T ss_pred CCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc-hhcccCCCCCcccHHHH
Confidence 89999999998652 57888888888873 3 35789999999999999999994 455542 11111110
Q ss_pred ---------cc-cEEEecCCccC---CCCCeeEEEEe--CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHH
Q 018318 234 ---------YC-HIVTTTTHKSL---RGPRAGMIFYR--KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGA 298 (358)
Q Consensus 234 ---------~~-d~~~~s~~K~l---~g~~gG~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 298 (358)
.. -+.+.|++|.+ +|.|+||+.+. ++ ++.+.+.+...... . ++....++
T Consensus 331 ~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~--------------~l~~~l~k~~~~~~-~-s~~~~Q~~ 394 (534)
T PLN02231 331 ARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTS--------------DVREQIYKVASVNL-C-SNISGQIL 394 (534)
T ss_pred HhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCH--------------HHHHHHHHHHhhhc-C-CChHHHHH
Confidence 11 25677999964 58899999874 22 35554443221111 1 12122222
Q ss_pred HHHHHHH-------hcc--HHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 299 LAVALKQ-------AST--PAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 299 l~~al~~-------~~~--~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
...++.. +.. ++.....+.+.++++++.+.|++. |+++.. +..+..+|+++.
T Consensus 395 ~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~-p~Ggfylw~~l~ 456 (534)
T PLN02231 395 ASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNK-AEGAMYLFPRIH 456 (534)
T ss_pred HHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC-CCeeeEEecccc
Confidence 2222210 000 011234567888899999999987 888765 578888996654
No 185
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.79 E-value=2.4e-18 Score=162.41 Aligned_cols=219 Identities=15% Similarity=0.131 Sum_probs=146.7
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
+|.++|. +.+.+++|| ++++++.|.+. .+.++||+.|+.+++.+++++||+|+++...|++.+... .
T Consensus 55 ~~~Y~r~--~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~--~ 121 (384)
T PRK06434 55 PYIYTRW--GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF--N 121 (384)
T ss_pred CcceeCC--CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH--H
Confidence 3444544 568888998 77999999886 378899999999999999999999999877666544211 0
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
..+...|+ ++.++++++ ...++ ++..++++|++..+.++ ...|+++|+++||+++ +++|++|+
T Consensus 122 ---~~~~~~Gi--~v~fvd~~~-~~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~ 186 (384)
T PRK06434 122 ---KVLKTLGI--HVDYIDTDR-LNSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFA 186 (384)
T ss_pred ---HHHHhcCc--EEEEECCCC-hhhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCC
Confidence 11223454 455555432 11222 22236788888877665 4679999999999998 46799976
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.+.. ..+++ ++|++++|++|+++|+. ||+++++++ ++.+++...... .|....+.
T Consensus 187 s~~~-----~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~--------------~~~~~~~~~~~~--~G~~~~~~ 245 (384)
T PRK06434 187 SPYN-----QNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK--------------SIFNNLVERRKT--LGSNPDPI 245 (384)
T ss_pred Cccc-----CCchhcCCCEEEeecccccCCCCCceEEEEecCcH--------------HHHHHHHHHHHh--cCCCCCHH
Confidence 5432 24566 89999999999998754 788877664 444444322110 11111111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
-+ +..++.+ +.+..++++.+++++.+.++|+++.
T Consensus 246 ~A--~l~~~gL--~tL~~R~~r~~~~a~~~a~~L~~~p 279 (384)
T PRK06434 246 QA--YLALRGL--KTLGLRMEKHNKNGMELARFLRDSK 279 (384)
T ss_pred HH--HHHHhCC--CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11 2233333 3578899999999999999999873
No 186
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.79 E-value=5.1e-17 Score=159.13 Aligned_cols=271 Identities=12% Similarity=0.036 Sum_probs=163.3
Q ss_pred CHHHHHHHhcccccCC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhc-C
Q 018318 44 SFAVIEALGSALTNKY--SEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVL-E 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~--~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~-~ 119 (358)
|..+++++.+.+.... ...|+. .....++.+.+.+++.+..|.+.+. ..|+.++|+ +|+..++.+++ +
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~ 161 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTD------SAGYPFVRKAVAAFIERRDGVPKDP--SDIFLTDGASSGIKLLLQLLIGD 161 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCc------ccCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHHHHHHHHHHHhccC
Confidence 4577777765443321 112322 2233455555566776665644311 135566664 69999999998 7
Q ss_pred CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhc-----CCcEEEEcCCCCC
Q 018318 120 PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDF-----RPKLIICGGSAYP 193 (358)
Q Consensus 120 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~-----~~~~v~~~~~~~~ 193 (358)
|||.|++..|.|.++.. .++..|..+ +.++.+++ ++.+|++++++++.+. ++|+|++++++||
T Consensus 162 ~gD~Vlv~~P~y~~y~~---------~~~~~g~~~--v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NP 230 (481)
T PTZ00377 162 PSDGVMIPIPQYPLYSA---------AITLLGGKQ--VPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNP 230 (481)
T ss_pred CCCEEEECCCCchhHHH---------HHHHcCCEE--EEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCC
Confidence 99999999998876431 234566544 44444433 4589999999998642 6888877788877
Q ss_pred --Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhcc--ccCC------CCC-c-----ccEEEecCCccC---CCCCe
Q 018318 194 --RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQ--EAAN------PFE-Y-----CHIVTTTTHKSL---RGPRA 251 (358)
Q Consensus 194 --~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~--~~~~------~~~-~-----~d~~~~s~~K~l---~g~~g 251 (358)
...+ +++|+++|++||+++|+|+++ ..+.+.+ .... .+. . --+++.|++|.+ +|.|.
T Consensus 231 TG~~~s~e~~~~i~~~a~~~~~~iI~De~Y-~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi 309 (481)
T PTZ00377 231 TGQVLTRDVMEEIIKFCYEKGIVLMADEVY-QENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG 309 (481)
T ss_pred CCcCCCHHHHHHHHHHHHHCCCEEEEehhh-HhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce
Confidence 3444 889999999999999999995 3444421 1111 011 1 125678999974 58899
Q ss_pred eEEEEe--CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHh--cc-------HHHHHHHHHHHH
Q 018318 252 GMIFYR--KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA--ST-------PAFKAYAKQVKA 320 (358)
Q Consensus 252 G~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~--~~-------~~~~~~~~~~~~ 320 (358)
|++++. ++ ++.+.+........ +++.....++..++... .. .+.....+++.+
T Consensus 310 G~~~~~~~p~--------------~li~~l~~~~~~~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (481)
T PTZ00377 310 GYFELTNIPP--------------EVREQIYKLASINL--CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKR 373 (481)
T ss_pred EEEEEeCCCH--------------HHHHHHHHHhheec--CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 999873 22 45555544322211 12323333333333210 00 112222334577
Q ss_pred HHHHHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 321 NAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 321 ~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
+++.+.+.|++. |+++.. +..+..+|+++.
T Consensus 374 rr~~l~~~L~~~~g~~~~~-p~gg~fl~~~~~ 404 (481)
T PTZ00377 374 RAELLTDELNKIEGVSCQP-VEGAMYAFPRIE 404 (481)
T ss_pred HHHHHHHHHhcCCCcEeec-CCeeEEEEeecc
Confidence 788899999887 888765 566778898764
No 187
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.79 E-value=1.3e-16 Score=152.91 Aligned_cols=285 Identities=17% Similarity=0.067 Sum_probs=170.5
Q ss_pred hcceeEeccCC------CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCC------CCCCCC
Q 018318 31 CRGIELIASEN------FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL------DPTQWG 98 (358)
Q Consensus 31 ~~~~~l~a~~~------~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~------~~~~~~ 98 (358)
.+.+.|..+.. ++++.+.+++.+.+......+|.. ......+. +.++++++. ++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~------~~g~~~lr----~~ia~~l~~~~~~~~~~~~-- 98 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAP------SVGALAAR----EAVAEYLSSDLPGKLTADD-- 98 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCC------CCCCHHHH----HHHHHHHHhhcCCCCCHHH--
Confidence 35677776532 357889998887664432223321 11222343 556666653 2221
Q ss_pred ccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHH
Q 018318 99 VNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKA 177 (358)
Q Consensus 99 ~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l 177 (358)
.++++++++|+..++.+++++||+|++..|+|..+.. .+...|..+ +.++++. +++.+|++++++++
T Consensus 99 -ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g~~~--~~~~~~~~~~~~~d~~~l~~~~ 166 (403)
T TIGR01265 99 -VVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDT---------RAAFSGLEV--RLYDLLPEKDWEIDLDGLEALA 166 (403)
T ss_pred -EEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH---------HHHHcCCEE--EEecCCcccCCccCHHHHHHHh
Confidence 2344445779999999999999999999988764321 223456544 3444332 24679999999988
Q ss_pred hhcCCcEEEEcCCCCC--Ccc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C-cc-cEEEecCCccC-
Q 018318 178 LDFRPKLIICGGSAYP--RDW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YC-HIVTTTTHKSL- 246 (358)
Q Consensus 178 ~~~~~~~v~~~~~~~~--~~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~-~~-d~~~~s~~K~l- 246 (358)
.+ +++++++++++|| ... ++++|.++|+++|+++|+|+++. .+.+.+....++ . .. -+++.|++|.+
T Consensus 167 ~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 244 (403)
T TIGR01265 167 DE-KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYG-HMVFGDAPFIPMASFASIVPVLSLGGISKRWV 244 (403)
T ss_pred Cc-CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCccchhhhccCCcEEEEeecccccC
Confidence 64 6788888877776 333 48899999999999999999953 444332111122 1 12 26788999984
Q ss_pred -CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 018318 247 -RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVAL 325 (358)
Q Consensus 247 -~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l 325 (358)
+|.|-|++++++.. .... ..+.+.+....... . +++.....++..++.......++..++++.++++++
T Consensus 245 ~pGlRiG~~v~~~~~-------~~~~-~~~~~~~~~~~~~~-~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 314 (403)
T TIGR01265 245 VPGWRLGWIIIHDPH-------GIFR-DTVLQGLKNLLQRI-L-GPATIVQGALPDILENTPQEFFDGKISVLKSNAELC 314 (403)
T ss_pred CCcceEEEEEEeCch-------hhhH-HHHHHHHHHHhhhh-c-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 67788999985420 0000 01222222211111 1 122233333334443211123466777888889999
Q ss_pred HHHHhhC-CceeeeCCCcceEEEEEcCC
Q 018318 326 GNYLTGK-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 326 ~~~L~~~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
.+.|+.. |+++.. +..+..+|+++..
T Consensus 315 ~~~L~~~~~~~~~~-p~~g~f~~~~~~~ 341 (403)
T TIGR01265 315 YEELKDIPGLVCPK-PEGAMYLMVKLEL 341 (403)
T ss_pred HHHHhcCCCceecC-CCceeEEEEeccc
Confidence 9999887 777543 5678889998753
No 188
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=7.9e-18 Score=161.82 Aligned_cols=157 Identities=23% Similarity=0.228 Sum_probs=119.3
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCccccccc
Q 018318 72 NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (358)
Q Consensus 72 ~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g 151 (358)
.+....|| +.++++.|.+. .+.++||+.|+.+++.++++|||+|++..+.|++..... . ..+...|
T Consensus 62 ~p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~--~---~~~~~~G 127 (427)
T PRK05994 62 NPTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQF--G---HAFKSFG 127 (427)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHH--H---HHHHhcC
Confidence 35566787 78999999886 377899999999999999999999999998887643110 0 0122344
Q ss_pred ceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccC
Q 018318 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~ 229 (358)
. .+++++. .|++++++++.+ ++++|++++++|+ .+.|+++|.++|+++|+++++|++|+.++. .
T Consensus 128 ~--~v~~vd~------~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~ 193 (427)
T PRK05994 128 W--QVRWADA------DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-----I 193 (427)
T ss_pred c--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 3 4444432 478999999865 7899988877765 577999999999999999999999986643 2
Q ss_pred CCCC-cccEEEecCCccCCCCC---eeEEEE
Q 018318 230 NPFE-YCHIVTTTTHKSLRGPR---AGMIFY 256 (358)
Q Consensus 230 ~~~~-~~d~~~~s~~K~l~g~~---gG~i~~ 256 (358)
.+++ ++|+++.|+||+++|+. ||+++.
T Consensus 194 ~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 194 RPIEHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred CccccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 3455 89999999999987654 466654
No 189
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.78 E-value=8.3e-17 Score=154.08 Aligned_cols=277 Identities=14% Similarity=0.113 Sum_probs=162.1
Q ss_pred ceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHh-cCCCCCCCCccccccCChHH
Q 018318 33 GIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQT-FHLDPTQWGVNVQPYSGSPA 109 (358)
Q Consensus 33 ~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~-~g~~~~~~~~~v~~~sGt~a 109 (358)
.+.|..+.. .+++.+.+++....... .+|+.. ....++.+.+.+++... .++++++ .++++++++|
T Consensus 32 ~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~---i~~t~G~~~a 100 (397)
T PRK07568 32 VYHLNIGQPDIKTPEVFFEAIKNYDEEV--LAYSHS------QGIPELREAFAKYYKKWGIDVEPDE---ILITNGGSEA 100 (397)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCC--cCcCCC------CCCHHHHHHHHHHHHHhCCCCCcce---EEEcCChHHH
Confidence 455665543 35788888876543211 123221 11233433333333210 1344432 2334445679
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCC-C-CCHHHHHHHHhhcCCcEEEE
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG-Y-IDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-id~~~l~~~l~~~~~~~v~~ 187 (358)
+..++.+++++||+|++.+|.|..+.. ..+..|..+..+ +.+.+++ . .|++++++++.+ ++++|++
T Consensus 101 l~~~~~~l~~~gd~Vl~~~p~y~~~~~---------~~~~~g~~~~~v--~~~~~~g~~~~~~~~l~~~~~~-~~~~v~i 168 (397)
T PRK07568 101 ILFAMMAICDPGDEILVPEPFYANYNG---------FATSAGVKIVPV--TTKIEEGFHLPSKEEIEKLITP-KTKAILI 168 (397)
T ss_pred HHHHHHHhcCCCCEEEEecCCCccHHH---------HHHHcCCEEEEe--ecCcccCCCCCCHHHHHHhcCc-cceEEEE
Confidence 999998889999999999987654321 123456544444 4332233 3 468999998864 6888888
Q ss_pred cCCCCC--Ccc---chHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCC--CCc-c--cEEEecCCccC--CCCCeeEE
Q 018318 188 GGSAYP--RDW---DYARFRAVADKCGALLLCDMAHISGLVAAQE-AANP--FEY-C--HIVTTTTHKSL--RGPRAGMI 254 (358)
Q Consensus 188 ~~~~~~--~~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~--~~~-~--d~~~~s~~K~l--~g~~gG~i 254 (358)
++++|| ... ++++|+++|+++|+++++|+++ .++.+.+. .... +.+ . -+++.|++|.+ +|.+.|++
T Consensus 169 ~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~ 247 (397)
T PRK07568 169 SNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVY-REFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCL 247 (397)
T ss_pred ECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccc-hhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEE
Confidence 777776 333 5789999999999999999994 35543321 1111 112 2 27889999987 47788999
Q ss_pred EEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-C
Q 018318 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-G 333 (358)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G 333 (358)
+++++ ++.+.+....... .+ ++.....++..++.. .+..++...+++.++++.+.+.|++. |
T Consensus 248 ~~~~~--------------~~~~~~~~~~~~~-~~-~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 310 (397)
T PRK07568 248 ISKNK--------------ELIAAAMKLCQAR-LS-PPTLEQIGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIPG 310 (397)
T ss_pred ecCCH--------------HHHHHHHHHhhcc-CC-CCcHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88653 3444333221111 11 222222333333332 12234566777888899999999887 6
Q ss_pred ceeeeCCCcceEEEEEcC
Q 018318 334 YSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 334 ~~~~~~~~~~~~~~v~~~ 351 (358)
+.+.. +..++.+|+++.
T Consensus 311 ~~~~~-p~g~~~~~~~l~ 327 (397)
T PRK07568 311 VVCEK-PKGAFYIIAKLP 327 (397)
T ss_pred ceecC-CCcceEEEEecC
Confidence 76554 456677888864
No 190
>PRK09265 aminotransferase AlaT; Validated
Probab=99.78 E-value=9e-17 Score=154.17 Aligned_cols=307 Identities=15% Similarity=0.148 Sum_probs=175.0
Q ss_pred CCccchhhcccccccchHHHHHHHHHHHHh----hcceeEeccCC-----CCCHHHHHHHhcccccCCCCCCCCCCCCCC
Q 018318 1 MDPVNEWGNSSLETVDPEIHDLIEKEKRRQ----CRGIELIASEN-----FTSFAVIEALGSALTNKYSEGMPGNRYYGG 71 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~a~~~-----~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~ 71 (358)
|.|++ -++.+.++.+..+..+.+...+. +..+.|..++. .+++.+.+++.+.+... .+|+.. .|
T Consensus 1 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~Y~~~---~G 73 (404)
T PRK09265 1 MKPIE--KSSKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGYSDS---KG 73 (404)
T ss_pred CCccc--hhHHHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCC---CC
Confidence 55652 12334555555444343333322 24577776432 25788888877654321 234321 12
Q ss_pred chhHHHHHHHHHHHHHHhc------CCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCC
Q 018318 72 NEFIDEIENLCRSRALQTF------HLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGG 144 (358)
Q Consensus 72 ~~~~~~le~~~~~~la~~~------g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~ 144 (358)
...+. +.+++++ +++++ .|++++|+ +++..++.+++++||+|++..|+|..+..
T Consensus 74 ---~~~lr----~~ia~~~~~~~~~~~~~~----~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~-------- 134 (404)
T PRK09265 74 ---LFSAR----KAIMQYYQQKGIPDVDVD----DIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTA-------- 134 (404)
T ss_pred ---cHHHH----HHHHHHHhccCCCCCCcc----cEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHH--------
Confidence 22343 3444444 55553 35566665 57888888899999999999998875431
Q ss_pred cccccccceeEEeecccCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechh
Q 018318 145 KKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAH 218 (358)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~ 218 (358)
.+...|... +.++.+. .++.+|++++++++.+ ++++|++++++|| ...+ +++|.++|+++|+++|+|+++
T Consensus 135 -~~~~~g~~~--v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y 210 (404)
T PRK09265 135 -AVSLSGGKP--VHYLCDEEAGWFPDLDDIRSKITP-RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIY 210 (404)
T ss_pred -HHHHcCCEE--EEEecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhh
Confidence 223445433 3333332 2467999999998864 6888888888776 3455 889999999999999999995
Q ss_pred hhhhhhccccCCCC---C-cc-cEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCC
Q 018318 219 ISGLVAAQEAANPF---E-YC-HIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGP 291 (358)
Q Consensus 219 ~~g~~~~~~~~~~~---~-~~-d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (358)
. .+.+.+....++ . .. -+++.|++|.+ +|.|.|+++++.... ... .+.+.+....... . ++
T Consensus 211 ~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~-------~~~--~~~~~~~~~~~~~-~-~~ 278 (404)
T PRK09265 211 D-KILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKK-------HAK--GYIEGLDMLASMR-L-CA 278 (404)
T ss_pred h-hccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchH-------HHH--HHHHHHHHHhccc-c-CC
Confidence 4 444322111121 1 22 25678999986 577889999743200 000 1222222111111 1 12
Q ss_pred ChhHHHHHHHHHHHhccHHHHHH---HHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcCC
Q 018318 292 HNHQIGALAVALKQASTPAFKAY---AKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 292 ~~~~~~al~~al~~~~~~~~~~~---~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
+.....++..++... ..+.++ .+++.++++++.+.|++. |+++.. +..+..+|+++..
T Consensus 279 ~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~-p~~g~~l~~~~~~ 340 (404)
T PRK09265 279 NVPAQHAIQTALGGY--QSINELILPGGRLYEQRDRAWELLNAIPGVSCVK-PKGALYAFPKLDP 340 (404)
T ss_pred CcHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccC-CCcceEEEEEecc
Confidence 222333333333211 112222 245677788899999887 777654 5678889988753
No 191
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.78 E-value=8.3e-18 Score=159.00 Aligned_cols=263 Identities=16% Similarity=0.177 Sum_probs=168.6
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
..+.|..++++ +|+.+++++.+.+... ..|+.. | ..++ |+.+++++|++++ .|++++|+ +
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~--~~Yp~~----g---~~~L----r~aia~~~~~~~~----~I~vt~Gs~e 92 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDH--ALYPDG----G---ATTL----RQTIANKLHVKME----QVLCGSGLDE 92 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhc--CcCCCC----C---HHHH----HHHHHHHhCCCcc----eEEECCCHHH
Confidence 45778877765 4789999987665332 123321 1 2233 4778888999875 35566665 6
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.++++|||+|++..|.|..+.. .+...|..+..+ +.+ ++.+|++++++++++ ++++|+++
T Consensus 93 ~i~~~~~~l~~~gd~vlv~~P~y~~~~~---------~~~~~g~~v~~v--~~~--~~~~d~~~l~~~~~~-~~~~v~i~ 158 (366)
T PRK01533 93 VIQIISRAVLKAGDNIVTAGATFPQYRH---------HAIIEGCEVKEV--ALN--NGVYDLDEISSVVDN-DTKIVWIC 158 (366)
T ss_pred HHHHHHHHhcCCCCEEEEcCCcHHHHHH---------HHHHcCCEEEEe--ecC--CCCcCHHHHHHHhCc-CCcEEEEe
Confidence 8899999999999999999988765431 234566544444 433 457999999998864 78999888
Q ss_pred CCCCC--CccchH---HHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C--cccEEEecCCccC--CCCCeeEEEE
Q 018318 189 GSAYP--RDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E--YCHIVTTTTHKSL--RGPRAGMIFY 256 (358)
Q Consensus 189 ~~~~~--~~~~l~---~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~--~~d~~~~s~~K~l--~g~~gG~i~~ 256 (358)
+++|| ...+.+ +|+++|++++ ++|+|++++ .+...+.....+ + .--+++.|++|.+ +|.|.|++++
T Consensus 159 ~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~ 236 (366)
T PRK01533 159 NPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG 236 (366)
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC
Confidence 88887 345554 5555555555 678899964 544322111111 1 2347889999986 5678899988
Q ss_pred eCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHhhCCce
Q 018318 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF-KAYAKQVKANAVALGNYLTGKGYS 335 (358)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~G~~ 335 (358)
++ ++.+.+.....+. +.+.....++..++ ...++ ++..+...++++++.+.|+..|++
T Consensus 237 ~~---------------~~~~~l~~~~~~~---~~~~~~q~aa~~~l---~~~~~~~~~~~~~~~~r~~~~~~l~~~g~~ 295 (366)
T PRK01533 237 HE---------------ELIEKLNVVRLPF---NVSSLAQKAATIAF---GDDEFIEEIVRVNTEGLRQYESFCKENEIP 295 (366)
T ss_pred CH---------------HHHHHHHHhcCCC---CcCHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 76 4555555433221 22222222323333 22333 555667778888898999888988
Q ss_pred eeeCCCcceEEEEEc
Q 018318 336 LVTGGTENHLVLWDL 350 (358)
Q Consensus 336 ~~~~~~~~~~~~v~~ 350 (358)
++. +.+..+|+.+
T Consensus 296 ~~~--~~~nf~~~~~ 308 (366)
T PRK01533 296 FYQ--SQTNFIFLPV 308 (366)
T ss_pred cCC--CcCcEEEEeC
Confidence 765 3455688886
No 192
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.78 E-value=1.3e-17 Score=155.47 Aligned_cols=223 Identities=20% Similarity=0.192 Sum_probs=154.8
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++.++|. +.+.++.|| +.++++-|.+. .+.++||+.|+..++.+++++||+|++....|++-+... .
T Consensus 54 ~~~Y~R~--~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~--~ 120 (396)
T COG0626 54 GYDYSRT--GNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLF--E 120 (396)
T ss_pred CcccccC--CCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHH--H
Confidence 4555543 568888898 77888888876 377899999999999999999999999988887643211 1
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
..++..|+ ++..++ .-|.+++++++.+.++++|++..|.|| .+.||++|+++||++|++++||.+-+
T Consensus 121 ---~~l~~~gi--~~~~~d------~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfa 189 (396)
T COG0626 121 ---KILQKFGV--EVTFVD------PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFA 189 (396)
T ss_pred ---HHHHhcCe--EEEEEC------CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcc
Confidence 11123343 444442 244556666665447999999999998 46799999999999999999999865
Q ss_pred hhhhhccccCCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 220 ~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.+. +..|++ |+||++.|.+|.+.|- -+|+++++++ ++.+.+.......+.....+
T Consensus 190 tP~-----~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~--------------~~~~~~~~~~~~~~G~~l~p-- 248 (396)
T COG0626 190 TPV-----LQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE--------------ELYELLFFAQRANTGAVLSP-- 248 (396)
T ss_pred ccc-----ccChhhcCCCEEEEeccccccCCcceeeeEEecChH--------------HHHHHHHHHHHhhcCCCCCH--
Confidence 543 345677 8999999999999774 2577776665 34443321111111111111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
.-+ +..++-+ +-+..+++++.+|+..+.++|.++
T Consensus 249 ~dA-~l~lRGl--kTL~~Rm~~~~~nA~~IA~~L~~~ 282 (396)
T COG0626 249 FDA-WLLLRGL--RTLALRMERHNENALKIAEFLADH 282 (396)
T ss_pred HHH-HHHHhcc--chHHHHHHHHHHHHHHHHHHHhcC
Confidence 111 3333332 346788999999999999999997
No 193
>PRK06855 aminotransferase; Validated
Probab=99.78 E-value=7.4e-17 Score=155.92 Aligned_cols=290 Identities=14% Similarity=0.097 Sum_probs=168.2
Q ss_pred ceeEeccCC-----CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh
Q 018318 33 GIELIASEN-----FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (358)
Q Consensus 33 ~~~l~a~~~-----~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt 107 (358)
.+.+..++. .+|+.+.+++.+.+......+|... .| ..++.+.+.+++++.+|...+. ..|+.++|+
T Consensus 34 ~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~---~G---~~~LReaia~~~~~~~g~~~~~--~~I~it~G~ 105 (433)
T PRK06855 34 ITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPT---KG---VLETREFLAELNNKRGGAQITP--DDIIFFNGL 105 (433)
T ss_pred ccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCC---CC---CHHHHHHHHHHHHhccCCCCCH--hHEEEcCcH
Confidence 455544433 4578888887765533211233321 12 2344455557777766653210 135566665
Q ss_pred -HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHHhhc-CCcE
Q 018318 108 -PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDF-RPKL 184 (358)
Q Consensus 108 -~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~~-~~~~ 184 (358)
+|+..++. +++|||.|++..|.|.++... .....|. .++.++.+. +++.+|+++++++++.. ++++
T Consensus 106 ~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~--------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 174 (433)
T PRK06855 106 GDAIAKIYG-LLRREARVIGPSPAYSTHSSA--------EAAHAGY--PPVTYRLDPENNWYPDLDDLENKVKYNPSIAG 174 (433)
T ss_pred HHHHHHHHH-hcCCCCeEEEeCCCCchHHHH--------HHHhcCC--eEEEEecccccCCCCCHHHHHHHHhcCCCceE
Confidence 58877774 789999999999988753210 0112243 444444442 24579999999998642 5678
Q ss_pred EEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC----Cc-ccEEEecCCccC--CCCCee
Q 018318 185 IICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF----EY-CHIVTTTTHKSL--RGPRAG 252 (358)
Q Consensus 185 v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~----~~-~d~~~~s~~K~l--~g~~gG 252 (358)
+++++|+||+ .. .+++|.++|++||+++|+|+++ ..+.+.+....++ .. ..+++.|++|.+ +|.|.|
T Consensus 175 i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y-~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG 253 (433)
T PRK06855 175 ILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIY-NNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCG 253 (433)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEE
Confidence 8878888873 33 4778899999999999999994 4554433211122 11 237889999986 678999
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS-TPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
|+++++.... +.+. .+.+.+....... ..++.....++..++..-. +..+++.++.+.++++.+.+.|.+
T Consensus 254 ~ii~p~~~~~-----~~~~--~~~~~~~~~~~~~--~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~ 324 (433)
T PRK06855 254 WIEVYNADKD-----EVFK--KYINSILNAKMIE--VCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKD 324 (433)
T ss_pred EEEEeCCchh-----hHHH--HHHHHHHHhhccc--cCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998531000 0000 1222222211111 1122222223233332110 112355566778888889999987
Q ss_pred C-CceeeeCCCcceEEEEEcCC
Q 018318 332 K-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 332 ~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
. |+++.. +..++.+|+++..
T Consensus 325 ~~~~~~~~-p~gg~~~w~~l~~ 345 (433)
T PRK06855 325 VPGLKVNR-TNGAFYMTVVFED 345 (433)
T ss_pred CCCeeccC-CCeeEEEeecccc
Confidence 6 776654 5678889999864
No 194
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=3.1e-17 Score=155.97 Aligned_cols=266 Identities=17% Similarity=0.108 Sum_probs=171.3
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
+.+.|..++++ +||.+++++..... . ..|+. ....++ |+++++++|++++ .|++++|+ +
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~~--~-~~Yp~-------~~~~~l----r~~ia~~~~~~~~----~I~~t~Ga~~ 114 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMKF--P-YVYPD-------PESRRL----RAALAEDSGLESE----NILVGCGADE 114 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhHh--h-ccCCC-------CCHHHH----HHHHHHHhCcChh----hEEEcCCHHH
Confidence 45777777654 57889988754211 0 11221 112334 4789999998874 35567775 5
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.++++|||+|+++.|.|+.+. ...+..|..+ +.++.+ +++.+|+++++++++..++++|+++
T Consensus 115 ~i~~~~~~~~~~gd~Vlv~~P~y~~y~---------~~~~~~g~~~--~~v~~~-~~~~~d~~~l~~~~~~~~~~~v~l~ 182 (380)
T PLN03026 115 LIDLLMRCVLDPGDKIIDCPPTFGMYV---------FDAAVNGAEV--IKVPRT-PDFSLDVPRIVEAVETHKPKLLFLT 182 (380)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHH---------HHHHHcCCEE--EEeecC-CCCCcCHHHHHHHHhccCCcEEEEe
Confidence 888888888999999999998875332 1223456544 444433 3578999999999854578999988
Q ss_pred CCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccC--CCCCeeEEEEeCCCCC
Q 018318 189 GSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSL--RGPRAGMIFYRKGPKP 262 (358)
Q Consensus 189 ~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~ 262 (358)
+++|| ...+.+++.++++.. +++|+|+++. .+...+.....+. ...+++.|++|.+ +|.|.|+++++.
T Consensus 183 ~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~-~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~---- 256 (380)
T PLN03026 183 SPNNPDGSIISDDDLLKILELP-ILVVLDEAYI-EFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL---- 256 (380)
T ss_pred CCCCCCCCCCCHHHHHHHHhcC-CEEEEECcch-hhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH----
Confidence 88876 567899999999865 8999999953 4332211111111 2348889999986 577789999877
Q ss_pred CCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC-ceeeeCCC
Q 018318 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG-YSLVTGGT 341 (358)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G-~~~~~~~~ 341 (358)
++.+.+.....+. +.+.....++.+++.. .+.+++.++++.++++++.+.|++.| +.+. ++
T Consensus 257 -----------~~i~~l~~~~~~~---~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--p~ 318 (380)
T PLN03026 257 -----------SIIEYLWRAKQPY---NVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPY--PS 318 (380)
T ss_pred -----------HHHHHHHHhcCCC---CCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEC--CC
Confidence 3445554432222 1222222232333321 12235667778888999999999886 4443 35
Q ss_pred cceEEEEEcC
Q 018318 342 ENHLVLWDLR 351 (358)
Q Consensus 342 ~~~~~~v~~~ 351 (358)
.++.+|+++.
T Consensus 319 ~~~f~~~~~~ 328 (380)
T PLN03026 319 DANFILCRVT 328 (380)
T ss_pred CCeEEEEECC
Confidence 6777888865
No 195
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.78 E-value=5e-18 Score=159.95 Aligned_cols=222 Identities=23% Similarity=0.255 Sum_probs=150.2
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccc
Q 018318 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (358)
Q Consensus 62 g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~ 141 (358)
++.++|+ |.+....+| ++++++.|.+. .+.++||+.|+.+++.+++++||+|++....|++-... +.
T Consensus 46 ~~~Y~R~--gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~--~~ 112 (386)
T PF01053_consen 46 GYIYSRY--GNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRL--LE 112 (386)
T ss_dssp SCSBTTT--C-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHH--HH
T ss_pred Ccceecc--ccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhh--hh
Confidence 4666654 678888898 77899999875 47789999999999999999999999999877653311 00
Q ss_pred cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--ccchHHHHHHHHHhC-CEEEEechh
Q 018318 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR--DWDYARFRAVADKCG-ALLLCDMAH 218 (358)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~~l~~i~~la~~~g-~~lvvD~a~ 218 (358)
..+...|+ ++.+++ .-|++++++++++ ++++|++..+.||. ..|+++|+++||++| ++++||.+-
T Consensus 113 ---~~l~~~gv--~v~~~d------~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~ 180 (386)
T PF01053_consen 113 ---ELLPRFGV--EVTFVD------PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTF 180 (386)
T ss_dssp ---HCHHHTTS--EEEEES------TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTT
T ss_pred ---hhhcccCc--EEEEeC------chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccc
Confidence 01112343 444442 3689999999986 88999999888883 679999999999998 999999986
Q ss_pred hhhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeC-CCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCCh
Q 018318 219 ISGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRK-GPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHN 293 (358)
Q Consensus 219 ~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (358)
+.+.. ..|++ |+|+++.|++|.+.|.. ||++++++ . ++.+.++.... ..|....
T Consensus 181 atp~~-----~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~--------------~~~~~l~~~~~--~~G~~~~ 239 (386)
T PF01053_consen 181 ATPYN-----QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS--------------ELYDRLREFRR--LLGATLS 239 (386)
T ss_dssp THTTT-----C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH--------------HHHHHHHHHHH--HHT-B--
T ss_pred cceee-----eccCcCCceEEEeeccccccCCcceeeEEEEECchh--------------hhhhhhcchhh--hcCccch
Confidence 55432 34566 89999999999998764 68888876 2 34444432211 1111111
Q ss_pred hHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 294 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 294 ~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
+ ..+ +..++-+ +-+..+++++.+|+..+.++|+++.
T Consensus 240 p-~da-~ll~rgl--~Tl~~R~~~~~~nA~~lA~~L~~hp 275 (386)
T PF01053_consen 240 P-FDA-WLLLRGL--RTLPLRMERQNENAEALAEFLEEHP 275 (386)
T ss_dssp H-HHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTST
T ss_pred H-HHH-HHHhcCC--CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 111 2222322 2367889999999999999999983
No 196
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=4.1e-17 Score=154.60 Aligned_cols=264 Identities=17% Similarity=0.079 Sum_probs=168.8
Q ss_pred ceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChH-H
Q 018318 33 GIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP-A 109 (358)
Q Consensus 33 ~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~-a 109 (358)
.+.|..+++. +++.+.+++.+.+.... +|+.. ....|+ +.++++++++++ .|++++|+. +
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~--~Y~~~-------~~~~Lr----~~ia~~~~~~~~----~I~it~G~~~~ 96 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEIW--KYGDP-------ENHDLR----HALAAHHGVAPE----NIMVGEGIDGL 96 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHhh--cCCCC-------ccHHHH----HHHHHHhCCCHH----HEEEcCCHHHH
Confidence 3577777654 47899999877653211 23321 123444 778888898764 366777764 7
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
+..++.++++|||.|++..|.|..+.. .+...|.++. .++.+ +..+|++++++.+.+.++++|++++
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~---------~~~~~g~~~~--~vp~~--~~~~~~~~l~~~~~~~~~~~i~l~~ 163 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNY---------HVAGFGGRLV--TVPYR--DDREDLDALLDAARRENAPLVYLAN 163 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHH---------HHHHcCCeEE--EeeCC--CCCCCHHHHHHHhcccCCcEEEEeC
Confidence 777888889999999999988765431 1234555444 44433 3358999998877655789998888
Q ss_pred CCCC--CccchHHHHHHHHHh--CCEEEEechhhhhhhhccccCCCCC---cccEEEecCCccC--CCCCeeEEEEeCCC
Q 018318 190 SAYP--RDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE---YCHIVTTTTHKSL--RGPRAGMIFYRKGP 260 (358)
Q Consensus 190 ~~~~--~~~~l~~i~~la~~~--g~~lvvD~a~~~g~~~~~~~~~~~~---~~d~~~~s~~K~l--~g~~gG~i~~~~~~ 260 (358)
++|| ...+.+++.++++.+ ++++|+|+++. .+...+.. .++. .--+++.|++|.+ +|.|.|++++++
T Consensus 164 P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~-~~~~~~~~-~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~-- 239 (369)
T PRK08153 164 PDNPMGSWHPAADIVAFIEALPETTLLVLDEAYC-ETAPAGAA-PPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP-- 239 (369)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hhcCcccc-hhhhhcCCCEEEEecchHhccCcchheeeeecCH--
Confidence 8876 456766666666543 89999999953 44332211 1222 2237789999987 477789999976
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCceeeeC
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSLVTG 339 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~~ 339 (358)
++.+.+.....+. +.+.....++..++. ..+ .++..++..++++++.+.|++.|+.+.
T Consensus 240 -------------~~~~~l~~~~~~~---~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~-- 298 (369)
T PRK08153 240 -------------GTIKAFDKVRNHF---GMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGLTPL-- 298 (369)
T ss_pred -------------HHHHHHHHhhcCC---CCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCccC--
Confidence 3444444322221 223333333333332 223 356677788888999999998898755
Q ss_pred CCcceEEEEEcC
Q 018318 340 GTENHLVLWDLR 351 (358)
Q Consensus 340 ~~~~~~~~v~~~ 351 (358)
+..++.+|+++.
T Consensus 299 p~~~~f~~~~~~ 310 (369)
T PRK08153 299 PSATNFVAIDCG 310 (369)
T ss_pred CCcCcEEEEECC
Confidence 356777888874
No 197
>PRK09148 aminotransferase; Validated
Probab=99.78 E-value=1.3e-16 Score=153.11 Aligned_cols=301 Identities=14% Similarity=0.113 Sum_probs=173.2
Q ss_pred cccccchHHHHHHHHHHHH----hhcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 018318 11 SLETVDPEIHDLIEKEKRR----QCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRS 84 (358)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~----~~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~ 84 (358)
++..+..+.+..+...++. .+..+.|..++.. +++.+.+++.+.+.......|+.. .| ..++.+.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~G---~~~lr~aia~ 79 (405)
T PRK09148 6 RIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSAS---KG---IPGLRRAQAA 79 (405)
T ss_pred hhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCC---CC---CHHHHHHHHH
Confidence 3444555544443333221 1244666655432 367888887765432111223321 12 2345445556
Q ss_pred HHHHhcCCC--CCCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc
Q 018318 85 RALQTFHLD--PTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (358)
Q Consensus 85 ~la~~~g~~--~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 161 (358)
++.+.+|.+ ++ ..|+.++| ++++..++.+++++||+|++..|+|..+.. .+...|+.+. +++.
T Consensus 80 ~~~~~~g~~~~~~---~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---------~~~~~g~~v~--~v~~ 145 (405)
T PRK09148 80 YYARRFGVKLNPD---TQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAF---------GFIMAGGVIR--SVPA 145 (405)
T ss_pred HHHHHhCCCCCCC---CcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH---------HHHhcCCEEE--EEeC
Confidence 666655653 32 13556666 469999999999999999999998875431 2234565444 4443
Q ss_pred CCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCC---
Q 018318 162 NSSTGYIDYDKLEEKALD--FRPKLIICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANP--- 231 (358)
Q Consensus 162 ~~~~~~id~~~l~~~l~~--~~~~~v~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~--- 231 (358)
+.++ .++++++++++. .++++|++++|+|| ...+ +++|.++|++||+++|+|+++. .+.+.+.....
T Consensus 146 ~~~~--~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~s~~~ 222 (405)
T PRK09148 146 EPDE--EFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYS-EIYFDGNPPPSVLQ 222 (405)
T ss_pred CCCC--CCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccch-hhhcCCCCCCChhh
Confidence 3222 123445555542 25788888888877 3344 5789999999999999999954 44332211111
Q ss_pred CC---cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHh
Q 018318 232 FE---YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA 306 (358)
Q Consensus 232 ~~---~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~ 306 (358)
+. ...+++.|++|.+ +|.|.|++++++ ++.+.+.........+ .+.....++..++..
T Consensus 223 ~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~---------------~~i~~l~~~~~~~~~~-~~~~~q~~~~~~L~~- 285 (405)
T PRK09148 223 VPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE---------------RLIAALTRVKSYLDYG-AFTPIQVAATAALNG- 285 (405)
T ss_pred CCCccCcEEEEeccccccCCcchheeeeeCCH---------------HHHHHHHHHHHHhccC-CChHHHHHHHHHHhC-
Confidence 11 2235689999986 567889999876 3444444322111111 122222222223321
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 307 STPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
....++..++++.++++++.+.|++.|+.+.. +..+..+|+++..
T Consensus 286 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~ 330 (405)
T PRK09148 286 PQDCIAEMRELYKKRRDVLVESFGRAGWDIPP-PAASMFAWAPIPE 330 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC-CCeeEEEEEECCC
Confidence 11224566777888999999999998887553 4677789998753
No 198
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.78 E-value=1e-17 Score=150.28 Aligned_cols=191 Identities=18% Similarity=0.141 Sum_probs=137.7
Q ss_pred eeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHH
Q 018318 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (358)
Q Consensus 34 ~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~ 113 (358)
..+.+..++.-..--++...+-.+. .||.++|. ..+..+.|| ++++.+-|--. .+.+.||..|+..+
T Consensus 27 ~PIyqtTsy~F~d~~haa~lF~l~~--~G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~a 93 (426)
T COG2873 27 VPIYQTTSYVFDDTDHAAALFGLKE--PGNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYA 93 (426)
T ss_pred cceeeeeeeecCCHHHHHHHhCCCc--CCceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHHHHH
Confidence 4555556665333333333332222 36777765 457788898 78888877654 37789999999999
Q ss_pred HHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC
Q 018318 114 YTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP 193 (358)
Q Consensus 114 l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~ 193 (358)
+..+.++||.|+..+.-||+-+.. +. ..++..|+ ++.+++ ..|++.++++|++ ++|+|++..-.||
T Consensus 94 i~~la~aGD~iVss~~LYGGT~~l--f~---~tl~~~Gi--~v~fvd------~~d~~~~~~aI~~-nTkavf~EtigNP 159 (426)
T COG2873 94 ILNLAGAGDNIVSSSKLYGGTYNL--FS---HTLKRLGI--EVRFVD------PDDPENFEAAIDE-NTKAVFAETIGNP 159 (426)
T ss_pred HHHhccCCCeeEeeccccCchHHH--HH---HHHHhcCc--EEEEeC------CCCHHHHHHHhCc-ccceEEEEeccCC
Confidence 999999999999999888875432 11 12234565 444543 3569999999986 8999998876676
Q ss_pred --CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEE
Q 018318 194 --RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFY 256 (358)
Q Consensus 194 --~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~ 256 (358)
.+.|+++|+++||++|++++||..-+.+ .+..|++ |+|+++.|.+||++|-. ||+++-
T Consensus 160 ~~~v~Die~ia~iAh~~gvpliVDNT~atp-----yl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 160 GLDVLDIEAIAEIAHRHGVPLIVDNTFATP-----YLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred CccccCHHHHHHHHHHcCCcEEEecCCCcc-----eecchhhcCCCEEEEeecccccCCccccceEEEe
Confidence 4679999999999999999999984433 2346777 99999999999997642 455554
No 199
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=2.5e-17 Score=155.36 Aligned_cols=270 Identities=15% Similarity=0.122 Sum_probs=172.3
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
..+.|..+++. +|+.+++++.+.+......+|+.. ...++ |+.+++++|.+.. ..|++++|+ +
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-------~~~~l----r~~ia~~~~~~~~---~~I~~t~G~~~ 92 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP-------RAAAL----KAALRAAMGVPAG---ADVLLGNGSDE 92 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC-------CHHHH----HHHHHHHhCcCCC---CcEEEcCCHHH
Confidence 45667677663 589999999877643211234321 12233 4778889998653 136667776 4
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.+++++||+|++..|.|..+.. .++..|+. +++++.+ +++.+|++++++++.++++++|+++
T Consensus 93 ~i~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g~~--~~~i~~~-~~~~~d~~~l~~~~~~~~~~~v~l~ 160 (356)
T PRK04870 93 LIQLLALACAKPGATVLAPEPGFVMYRM---------SAKLAGLE--FVGVPLT-ADFTLDLPAMLAAIAEHRPALVFLA 160 (356)
T ss_pred HHHHHHHHhcCCCCEEEECCCCHHHHHH---------HHHHcCCE--EEEecCC-CCCCCCHHHHHHHhhcCCCCEEEEc
Confidence 7888888889999999999987764321 23456654 4455554 3578999999999976678999888
Q ss_pred CCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCcc-CCCCCeeEEEEeCCCCCC
Q 018318 189 GSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKS-LRGPRAGMIFYRKGPKPP 263 (358)
Q Consensus 189 ~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~-l~g~~gG~i~~~~~~~~~ 263 (358)
+++|| ...+.+++.++++..++++|+|+++. .+.... ....+. .--+++.|++|+ ++|.|.|++++++
T Consensus 161 ~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~-~~~~~~-~~~~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~----- 233 (356)
T PRK04870 161 YPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQ-PFAGDS-WLPRLARFPNLLVMRTVSKLGLAGLRLGYLAGHP----- 233 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCch-hhcCcc-hHHHHhhCCCEEEEecchhhhhHHHhhhhhhCCH-----
Confidence 88877 46677888887777688999999853 333211 111112 224788999993 2567789998876
Q ss_pred CCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCc
Q 018318 264 KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTE 342 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~ 342 (358)
++.+.+.....+. +.+.....+...++.. ...++...+++.++++++.+.|++. |+.+.+ ..
T Consensus 234 ----------~~i~~~~~~~~~~---~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~ 296 (356)
T PRK04870 234 ----------AWIAELDKVRPPY---NVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVFP--SA 296 (356)
T ss_pred ----------HHHHHHHHccCCC---cCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CC
Confidence 3444454332221 1122222222222221 1234667788888999999999887 887653 44
Q ss_pred ceEEEEEcC
Q 018318 343 NHLVLWDLR 351 (358)
Q Consensus 343 ~~~~~v~~~ 351 (358)
+..+|+.+.
T Consensus 297 ~~~~~~~~~ 305 (356)
T PRK04870 297 ANFILVRVP 305 (356)
T ss_pred CeEEEEECC
Confidence 556888763
No 200
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=2e-17 Score=155.88 Aligned_cols=266 Identities=18% Similarity=0.148 Sum_probs=168.6
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
..+.|..+++. +++.+.+++.+.+.... ..|+.. ...+ .|+.++++++++++ .|++++|+ +
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~-------~~~~----lr~aia~~~~~~~~----~I~it~G~~~ 88 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP-------NADA----LRQAIAAYYGLDPE----QVFVGNGSDE 88 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC-------cHHH----HHHHHHHHhCCCHH----HEEEcCCHHH
Confidence 45677766654 36889999876654322 233321 1123 35788899998774 35566665 6
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.++++|||+|+++.|.|..+.. ..+..|+.+. .++.+ +++.+|++++++ ..++|+++
T Consensus 89 al~~~~~~l~~~gd~vlv~~P~y~~~~~---------~~~~~g~~~~--~v~~~-~~~~~d~~~l~~-----~~~~v~~~ 151 (353)
T PRK05387 89 VLAHAFLAFFNHDRPLLFPDITYSFYPV---------YAGLYGIPYE--EIPLD-DDFSIDVEDYLR-----PNGGIIFP 151 (353)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCHHHHHH---------HHHHcCCEEE--EeecC-CCCCCCHHHHHh-----cCCEEEEe
Confidence 9999999999999999999988753321 2244565444 44444 357899998863 34677788
Q ss_pred CCCCC--CccchHHHHHHHHHh-CCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccC--CCCCeeEEEEeCCCC
Q 018318 189 GSAYP--RDWDYARFRAVADKC-GALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSL--RGPRAGMIFYRKGPK 261 (358)
Q Consensus 189 ~~~~~--~~~~l~~i~~la~~~-g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l--~g~~gG~i~~~~~~~ 261 (358)
+++|| ...+.+++.++++.+ ++++|+|+++. .+.... .....+ ...+++.|++|.+ +|.+.|++++++
T Consensus 152 ~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~-~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--- 226 (353)
T PRK05387 152 NPNAPTGIALPLAEIERILAANPDSVVVIDEAYV-DFGGES-AIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--- 226 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc-ccCCcc-hHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH---
Confidence 88876 567889999998876 99999999963 221110 000111 3358899999975 577889999876
Q ss_pred CCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCC
Q 018318 262 PPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGT 341 (358)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~ 341 (358)
++.+.+..........+.+.....++..++.. ...+++.++++.++++++.+.|++.|+++.+ .
T Consensus 227 ------------~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~ 290 (353)
T PRK05387 227 ------------ELIEALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLP--S 290 (353)
T ss_pred ------------HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECC--C
Confidence 35555543321111112222333332333321 1224667788888999999999999987653 4
Q ss_pred cceEEEEEcC
Q 018318 342 ENHLVLWDLR 351 (358)
Q Consensus 342 ~~~~~~v~~~ 351 (358)
.++.+|+...
T Consensus 291 ~~~~~~~~~~ 300 (353)
T PRK05387 291 KANFVFARHP 300 (353)
T ss_pred cCcEEEEECC
Confidence 4566788754
No 201
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.78 E-value=1.2e-17 Score=160.36 Aligned_cols=165 Identities=19% Similarity=0.143 Sum_probs=120.4
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCcccccccccc
Q 018318 63 MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS 142 (358)
Q Consensus 63 ~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~ 142 (358)
+.++|+ +.+...+|| +++++++|.+. .++++||+.|+..++.+++++||+|++..+.|++.+... .
T Consensus 49 ~~ysr~--~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~--~- 114 (418)
T TIGR01326 49 NIYSRL--MNPTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLF--K- 114 (418)
T ss_pred ceeECC--CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH--H-
Confidence 434444 345566777 78999999865 477899999999999999999999999998876543211 0
Q ss_pred CCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhh
Q 018318 143 GGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHIS 220 (358)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~ 220 (358)
..+...|. ++++++. .|++++++++++ ++++|++++++|| ...|+++|.++|+++|+++|+|++|+.
T Consensus 115 --~~~~~~G~--~v~~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~ 183 (418)
T TIGR01326 115 --HTLKRLGI--EVRFVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFAT 183 (418)
T ss_pred --HHHHHcCc--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCch
Confidence 01223454 3444432 289999999875 7899988877776 467999999999999999999999876
Q ss_pred hhhhccccCCCCC-cccEEEecCCccCCCC--CeeEEEEe
Q 018318 221 GLVAAQEAANPFE-YCHIVTTTTHKSLRGP--RAGMIFYR 257 (358)
Q Consensus 221 g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~--~gG~i~~~ 257 (358)
+.. ..++. ++|++++|++|+++|+ +-|+++++
T Consensus 184 ~~~-----~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~ 218 (418)
T TIGR01326 184 PYL-----CRPIDHGADIVVHSATKYIGGHGTAIGGVIVD 218 (418)
T ss_pred hhc-----CCchhcCCeEEEECccccccCCccceEEEEEe
Confidence 532 23444 7999999999998653 33555554
No 202
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.78 E-value=9.1e-17 Score=154.01 Aligned_cols=280 Identities=16% Similarity=0.055 Sum_probs=172.2
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC-hH
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SP 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG-t~ 108 (358)
+.+.+..+... +++.+.+++.+.+.... .+|+.. .| ..++.+.+.+++++.+|.+... ..|++++| ++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~G---~~~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~~ 104 (402)
T PRK06107 34 SIVDLTVGEPDFDTPDHIKQAAVAAIERGE-TKYTLV---NG---TPALRKAIIAKLERRNGLHYAD--NEITVGGGAKQ 104 (402)
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-CCCCCC---CC---CHHHHHHHHHHHHHhcCCCCCh--hhEEEeCCHHH
Confidence 44666665443 36888888877664321 223221 12 2244445557888888875311 13556776 57
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
|+..++.+++++||.|+++.|.|.++.. .+...+.. .+.++.+. +++.+|++++++++.+ ++++|++
T Consensus 105 al~~~~~~~~~~gd~vl~~~p~y~~y~~---------~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~l 172 (402)
T PRK06107 105 AIFLALMATLEAGDEVIIPAPYWVSYPD---------MVLANDGT--PVIVACPEEQGFKLTPEALEAAITP-RTRWLIL 172 (402)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcCHHH---------HHHHcCCE--EEEecCCcccCCCCCHHHHHhhcCc-CceEEEE
Confidence 9999998889999999999987765431 12233432 33444432 2457999999998864 6788887
Q ss_pred cCCCCC--Ccc---chHHHHHHHHHh-CCEEEEechhhhhhhhccccCCCC-C------cccEEEecCCccC--CCCCee
Q 018318 188 GGSAYP--RDW---DYARFRAVADKC-GALLLCDMAHISGLVAAQEAANPF-E------YCHIVTTTTHKSL--RGPRAG 252 (358)
Q Consensus 188 ~~~~~~--~~~---~l~~i~~la~~~-g~~lvvD~a~~~g~~~~~~~~~~~-~------~~d~~~~s~~K~l--~g~~gG 252 (358)
++++|| ... .+++|+++|++| |+++|+|++++ .+.+.+.....+ . .--++++|++|.+ +|.|.|
T Consensus 173 ~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~-~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (402)
T PRK06107 173 NAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYD-HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIG 251 (402)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcc-ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccccee
Confidence 777776 333 467888999998 99999999854 333322111111 1 1237788999987 466779
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+++++++ +.+.+....... ..+++.....++..++.. ....++...+++.++++.+.+.|++.
T Consensus 252 ~~~~~~~---------------~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~ 314 (402)
T PRK06107 252 YAAGPAD---------------LIAAINKLQSQS-SSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAI 314 (402)
T ss_pred eeecCHH---------------HHHHHHHHHHhc-ccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9998773 444444322111 112232333332333321 11223566677888889999999886
Q ss_pred -CceeeeCCCcceEEEEEcC
Q 018318 333 -GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 333 -G~~~~~~~~~~~~~~v~~~ 351 (358)
|+++.. +..+..+|++++
T Consensus 315 ~g~~~~~-p~gg~~~~~~~~ 333 (402)
T PRK06107 315 PGLSCLV-PDGAFYLYVNCA 333 (402)
T ss_pred CCCcccC-CCcceEEeeecc
Confidence 777654 567888999874
No 203
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.78 E-value=4.6e-17 Score=153.54 Aligned_cols=243 Identities=19% Similarity=0.170 Sum_probs=156.7
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCC----CccccccCChHHHHHHHHhhcC--------CC-----CeEEEecCCCCc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQW----GVNVQPYSGSPANFAAYTAVLE--------PH-----DRIMGLDLPSGG 133 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~----~~~v~~~sGt~a~~~~l~a~~~--------~g-----d~Vl~~~~~~~~ 133 (358)
..+...++|+++.+|+++++|.+.+.. +.-+++++||++|..++.+..+ .| .-+++.+. .+
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~--~a 150 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSE--QA 150 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEET--TS
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccc--cc
Confidence 346677899999999999999983210 1236667788898888765421 12 23333332 23
Q ss_pred cccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcC-----CcEEE--EcCCCCCCccchHHHHHHHH
Q 018318 134 HLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFR-----PKLII--CGGSAYPRDWDYARFRAVAD 206 (358)
Q Consensus 134 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~-----~~~v~--~~~~~~~~~~~l~~i~~la~ 206 (358)
|++.. +.+...|.+++.+ +++ +++.+|+++|++++++.. |-+|+ ++.+..+...|+++|.++|+
T Consensus 151 H~S~~------Kaa~~lGlg~~~I--~~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~ 221 (373)
T PF00282_consen 151 HYSIE------KAARILGLGVRKI--PTD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICE 221 (373)
T ss_dssp -THHH------HHHHHTTSEEEEE---BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHH
T ss_pred ccHHH------HhcceeeeEEEEe--cCC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcc
Confidence 44332 3456678764444 445 378999999999986532 32333 24566778899999999999
Q ss_pred HhCCEEEEechhhhhhhhccccCC-C--CCcccEEEecCCccCCCCCe-eEEEEeCCCCCCCCCCCCCccccHHHHh---
Q 018318 207 KCGALLLCDMAHISGLVAAQEAAN-P--FEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKI--- 279 (358)
Q Consensus 207 ~~g~~lvvD~a~~~g~~~~~~~~~-~--~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~--- 279 (358)
++++|++||+|.+......+.+.. . ++.+|.++.++|||++.|.+ |+++++++. .+...+
T Consensus 222 ~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~-------------~l~~~~~~~ 288 (373)
T PF00282_consen 222 KYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKS-------------DLRDAFSIN 288 (373)
T ss_dssp HCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGG-------------GHHGGGEEE
T ss_pred ccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeeccc-------------chHHHhccC
Confidence 999999999996532332222211 1 23789999999999988865 888887741 111111
Q ss_pred ----h----------hhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceeee
Q 018318 280 ----N----------FAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVT 338 (358)
Q Consensus 280 ----~----------~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~ 338 (358)
. ......++++. ....+.++.+++.+..+++.+++++..+++++|++.|++. +|++..
T Consensus 289 ~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~ 361 (373)
T PF00282_consen 289 ADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN 361 (373)
T ss_dssp ETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS
T ss_pred hhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 0 00011223333 3344566788888777888999999999999999999998 588875
No 204
>PRK15029 arginine decarboxylase; Provisional
Probab=99.78 E-value=1.9e-17 Score=166.03 Aligned_cols=225 Identities=16% Similarity=0.052 Sum_probs=156.1
Q ss_pred HHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
+.+.+|++||++.. .+.++|| .+|.+++.+++++||+|++...+|-|.+. .+.+.|+....+...
T Consensus 210 Aq~~aA~~fgA~~t-----~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~---------al~L~ga~Pvyl~P~ 275 (755)
T PRK15029 210 SEKYAARVFGADRS-----WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ---------GLILTGAKPVYMVPS 275 (755)
T ss_pred HHHHHHHHhCCCcE-----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH---------HHHHcCCeEEEeccc
Confidence 45889999999873 4456665 58999999999999999999998887652 244566543333222
Q ss_pred cCCCC---CCCC-----HHHHHHHHhhcC-Cc--------EEEEcCCC-CCCccchHHHHHHHHHhCCEEEEechhhhhh
Q 018318 161 VNSST---GYID-----YDKLEEKALDFR-PK--------LIICGGSA-YPRDWDYARFRAVADKCGALLLCDMAHISGL 222 (358)
Q Consensus 161 ~~~~~---~~id-----~~~l~~~l~~~~-~~--------~v~~~~~~-~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~ 222 (358)
.+ +. +.++ ++.++++++++. .+ ++++..|+ +|...|+++|+++||++|++|+||+||+..+
T Consensus 276 ~~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 276 RN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred cc-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 21 22 2355 999999997642 23 66665554 6788899999999999999999999998766
Q ss_pred hhccccC--CCC-------Cccc-EEEecCCccCCCCC-eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCC
Q 018318 223 VAAQEAA--NPF-------EYCH-IVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGP 291 (358)
Q Consensus 223 ~~~~~~~--~~~-------~~~d-~~~~s~~K~l~g~~-gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (358)
...+.++ ..+ .++| +++.|+||++++.. ++++..+..- ..+ + .++++....-..++||
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~-------~~i---d-~~r~~~~l~~~qSTSP 423 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGR-------GAI---N-FSRFNQAYMMHATTSP 423 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCc-------ccc---C-HHHHHHHHHHHcCCCc
Confidence 5555444 223 3788 99999999998775 4666664420 011 1 1234433222335678
Q ss_pred ChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 292 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 292 ~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++..++++-.|.+.+.........++..+.+..|++.+.+.
T Consensus 424 SY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 424 LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999888877653234566777777888888888664
No 205
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=6.5e-17 Score=153.27 Aligned_cols=272 Identities=16% Similarity=0.157 Sum_probs=172.8
Q ss_pred ceeEeccCCC--CCHHHHHHHhcccccCC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCC--CCCCCCccccccCC
Q 018318 33 GIELIASENF--TSFAVIEALGSALTNKY--SEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL--DPTQWGVNVQPYSG 106 (358)
Q Consensus 33 ~~~l~a~~~~--~~~~V~~a~~~~~~~~~--~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~--~~~~~~~~v~~~sG 106 (358)
.+.|..++++ +|+.+++++.+.+.... -.+|+. .....|.+.+.+++.+.+|. +++ .|++++|
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~-------~g~~~lr~aia~~~~~~~~~~~~~~----~I~it~G 96 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD-------RDAVALRADLAAYLTAQTGVGLTVE----NVWAANG 96 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC-------CchHHHHHHHHHHhhhhccCCCChh----hEEECCC
Confidence 4667766654 57889999887654311 113332 12234554455566555554 443 4666777
Q ss_pred h-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEE
Q 018318 107 S-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI 185 (358)
Q Consensus 107 t-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v 185 (358)
+ +++..++.++++|||.|++..|.|..+.. .....|. +++.++.+ +++.+|+++++++++++++++|
T Consensus 97 ~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~---------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i 164 (368)
T PRK03317 97 SNEILQQLLQAFGGPGRTALGFVPSYSMHPI---------IARGTHT--EWVEGPRA-ADFTLDVDAAVAAIAEHRPDVV 164 (368)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCChHHHHH---------HHHhcCC--eeEEcccC-CCCCCCHHHHHHHHhccCCCEE
Confidence 5 58999999999999999999998765431 1233443 44554433 3568999999999976678988
Q ss_pred EEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C-ccc-EEEecCCccC--CCCCeeEEEE
Q 018318 186 ICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YCH-IVTTTTHKSL--RGPRAGMIFY 256 (358)
Q Consensus 186 ~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~-~~d-~~~~s~~K~l--~g~~gG~i~~ 256 (358)
++++++|| ...+.+++.++|+.+++++|+|++|. ++...+. .... + ..+ +++.|++|.+ +|.|.|++++
T Consensus 165 ~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~-~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~ 242 (368)
T PRK03317 165 FLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA-EFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA 242 (368)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch-hhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhC
Confidence 88888876 56789999999999999999999975 3432221 1111 1 123 6778999987 3667799998
Q ss_pred eCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCcee
Q 018318 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (358)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~ 336 (358)
++ ++.+.+.....+. ..+....++...++... ..+.+.++++.++++++.+.|++.|+++
T Consensus 243 ~~---------------~~~~~l~~~~~~~---~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 302 (368)
T PRK03317 243 AP---------------AVVDALRLVRLPY---HLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRV 302 (368)
T ss_pred CH---------------HHHHHHHhcCCCC---CCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEe
Confidence 76 4555554332221 11222233333333321 2344556677888889999999999887
Q ss_pred eeCCCcceEEEEEc
Q 018318 337 VTGGTENHLVLWDL 350 (358)
Q Consensus 337 ~~~~~~~~~~~v~~ 350 (358)
.. +..++.+|.++
T Consensus 303 ~~-~~~~~~~~~~~ 315 (368)
T PRK03317 303 AP-SDANFVLFGRF 315 (368)
T ss_pred CC-CCCcEEEEecc
Confidence 64 44566666554
No 206
>PRK08175 aminotransferase; Validated
Probab=99.77 E-value=3e-16 Score=150.08 Aligned_cols=281 Identities=16% Similarity=0.124 Sum_probs=168.0
Q ss_pred hcceeEeccC-C-CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC--CCCCCccccccCC
Q 018318 31 CRGIELIASE-N-FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PTQWGVNVQPYSG 106 (358)
Q Consensus 31 ~~~~~l~a~~-~-~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~--~~~~~~~v~~~sG 106 (358)
++.+.+..+. + ..++.+.+++.+.+......+|+. .....++.+.+.+++.+.+|.. ++ ..+++++|
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~~---~~i~~t~G 99 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYST------SRGIPRLRRAISRWYQDRYDVDIDPE---SEAIVTIG 99 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCC---CcEEEccC
Confidence 3445555432 2 235667777665543221122322 1223355555566776665653 32 12555666
Q ss_pred h-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc--CCc
Q 018318 107 S-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPK 183 (358)
Q Consensus 107 t-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~--~~~ 183 (358)
+ +++..++.++++|||+|++..|.|..+.. .....|.. ++.++.+. ...+++++++++++. +++
T Consensus 100 ~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g~~--~~~v~~~~--~~~~~~~l~~~l~~~~~~~~ 166 (395)
T PRK08175 100 SKEGLAHLMLATLDHGDTVLVPNPSYPIHIY---------GAVIAGAQ--VRSVPLVE--GVDFFNELERAIRESYPKPK 166 (395)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHHcCCe--EEEEeccc--CCCcHHHHHHHHhhccCCce
Confidence 5 68888888889999999999998775431 12345654 44444442 234588899888643 578
Q ss_pred EEEEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C---cccEEEecCCccC--CCCC
Q 018318 184 LIICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E---YCHIVTTTTHKSL--RGPR 250 (358)
Q Consensus 184 ~v~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~---~~d~~~~s~~K~l--~g~~ 250 (358)
+|++++++|| ...+ +++|.++|++||+++|+|+++. .+.+.+....++ . +..+++.|++|.| +|.|
T Consensus 167 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlR 245 (395)
T PRK08175 167 MMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYA-DIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWR 245 (395)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchH-hhccCCCCCcchhcCCCcccCEEEEeeccccccCcchh
Confidence 8888877776 3444 4799999999999999999954 444322211111 1 2236789999987 4567
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (358)
.|+++.++ ++.+.+.........+... ....+...++.. ....++..++++.++++++.+.|+
T Consensus 246 iG~~~~~~---------------~l~~~~~~~~~~~~~~~~~-~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~ 308 (395)
T PRK08175 246 IGFMVGNP---------------ELVSALARIKSYHDYGTFT-PLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLH 308 (395)
T ss_pred heeeeCCH---------------HHHHHHHHHHhhcccCCCc-HHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79998876 3544444322111111112 222222233321 112245667778888999999999
Q ss_pred hCCceeeeCCCcceEEEEEcCC
Q 018318 331 GKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 331 ~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
..|+.+.. +..+..+|+++..
T Consensus 309 ~~~~~~~~-p~~g~~i~i~l~~ 329 (395)
T PRK08175 309 EAGWMVEM-PKASMYVWAKIPE 329 (395)
T ss_pred HcCCcccC-CCEEEEEEEECCc
Confidence 98987653 4578889999864
No 207
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.77 E-value=8.4e-17 Score=156.68 Aligned_cols=285 Identities=17% Similarity=0.137 Sum_probs=171.6
Q ss_pred ceeEeccCCCCCHHHHHHHhcccccCCC--C-C--C-CCCCCCCCchhHHHHHHHHHHHHHHhcC----CCCCCCCcccc
Q 018318 33 GIELIASENFTSFAVIEALGSALTNKYS--E-G--M-PGNRYYGGNEFIDEIENLCRSRALQTFH----LDPTQWGVNVQ 102 (358)
Q Consensus 33 ~~~l~a~~~~~~~~V~~a~~~~~~~~~~--~-g--~-~~~~~~~~~~~~~~le~~~~~~la~~~g----~~~~~~~~~v~ 102 (358)
.|.|..++|.++..+++...+....... . + . .....|........|.+.+.+++.+.+| ++++ .|+
T Consensus 40 ~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~----~Ii 115 (468)
T PLN02450 40 IIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN----KLV 115 (468)
T ss_pred eEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH----HeE
Confidence 4888888887766665555433211000 0 0 0 0000111112223455555667766655 3443 355
Q ss_pred ccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccc-cccceeEEeecccC-CCCCCCCHHHHHHHHhh
Q 018318 103 PYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS-ATSIYFESLPYKVN-SSTGYIDYDKLEEKALD 179 (358)
Q Consensus 103 ~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~id~~~l~~~l~~ 179 (358)
.++|+ +++..++.++++|||.|+++.|.|.++.. .+. ..|+ ++++++.+ ++++.+|++++++++++
T Consensus 116 it~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~---------~~~~~~g~--~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 116 LTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR---------DLKWRTGV--EIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred EccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH---------HHhhcCCc--EEEEEecCCccCCcCCHHHHHHHHHH
Confidence 67775 58999999999999999999998876431 122 3454 44555543 23567899999998864
Q ss_pred -----cCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCCC-----------C--cc
Q 018318 180 -----FRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQE-AANPF-----------E--YC 235 (358)
Q Consensus 180 -----~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~~-----------~--~~ 235 (358)
.++++|++++|+||+ .. .+++|.++|++||+++|+|++++ .+.+.+. ....+ + .-
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~-~~~f~~~~~~s~l~~~~~~~~~~~~~~~~ 263 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYS-GTVFDSPGFVSVMEVLKDRKLENTDVSNR 263 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccc-ccccCCCCcccHHHHhhhcccccCCCCCc
Confidence 267888888888873 33 47788999999999999999943 4333221 11101 0 11
Q ss_pred cEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHh--ccHHH
Q 018318 236 HIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA--STPAF 311 (358)
Q Consensus 236 d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~--~~~~~ 311 (358)
-+++.|++|.+ +|.|.|+++++++ .+.+.+.... .. +..+.....++..++..- ....+
T Consensus 264 vi~l~S~SK~~~l~GlRiG~li~~~~--------------~l~~~~~~~~-~~--~~~s~~~Q~a~~~~L~~~~~~~~~l 326 (468)
T PLN02450 264 VHIVYSLSKDLGLPGFRVGAIYSNDE--------------MVVSAATKMS-SF--GLVSSQTQYLLSALLSDKKFTKNYL 326 (468)
T ss_pred EEEEEeccccCCCCCccEEEEEECCH--------------HHHHHHHHHh-hc--CCCCHHHHHHHHHHhCCchhHHHHH
Confidence 26789999976 6889999999764 2333333221 11 111222222222322210 00123
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 312 KAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 312 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
+..++++.+.++.+.+.|++.|+++.. +..+..+|+++.
T Consensus 327 ~~~~~~l~~rr~~l~~~L~~~gi~~~~-~~~g~flwi~l~ 365 (468)
T PLN02450 327 EENQKRLKQRQKKLVSGLEAAGIKCLK-SNAGLFCWVDMR 365 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccC-CCceEEEEEEch
Confidence 556777888889999999999988764 567778999985
No 208
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=3.4e-17 Score=154.72 Aligned_cols=265 Identities=17% Similarity=0.167 Sum_probs=168.8
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
+.+.|..+++. +++.|.+++.+.+.. .. .++. ....++ ++.++++++++++ .|++++|+ +
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~-~~p~-------~g~~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-LA-LYPD-------GYAPEL----RTKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-hh-cCCC-------CcHHHH----HHHHHHHhCCCHH----HEEECCCHHH
Confidence 45667666543 478899988766532 11 1111 122334 4778888998764 35566665 6
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.+++++||+|++..|.|+.+.. .....|.++..+++ + ++.+|++++++++.+ ++++|+++
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~~---------~~~~~g~~~~~~~~--~--~~~~d~~~l~~~~~~-~~~~v~i~ 158 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYRH---------NAIIEGAEVREVPL--K--DGGHDLEAMLKAIDE-QTKIVWIC 158 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHHH---------HHHHcCCeEEEEec--C--CCCcCHHHHHHhcCC-CCCEEEEe
Confidence 8888888889999999999988765321 12345654444443 3 467999999998864 78888888
Q ss_pred CCCCC--CccchHHHHHHHHH--hCCEEEEechhhhhhhhccccCCCC---C--cccEEEecCCccC--CCCCeeEEEEe
Q 018318 189 GSAYP--RDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPF---E--YCHIVTTTTHKSL--RGPRAGMIFYR 257 (358)
Q Consensus 189 ~~~~~--~~~~l~~i~~la~~--~g~~lvvD~a~~~g~~~~~~~~~~~---~--~~d~~~~s~~K~l--~g~~gG~i~~~ 257 (358)
+++|| ...+.++|.++++. +|+++|+|+++. .+...+..+..+ + ...+++.|++|.+ +|.|.|+++++
T Consensus 159 ~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~ 237 (359)
T PRK03158 159 NPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYY-EYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS 237 (359)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchH-hhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC
Confidence 88876 46688888888877 599999999964 333222111111 1 2357889999987 36677999987
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCcee
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSL 336 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~ 336 (358)
+ ++.+.+.....+. + .+.....++..++ ...+ .++..+...++++++.+.|++.|+++
T Consensus 238 ~---------------~~~~~~~~~~~~~--~-~~~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 296 (359)
T PRK03158 238 E---------------ELIEKLNIARPPF--N-TTRIAQYAAIAAL---EDQAFLKECVEKNAEGLEQYYAFCKEYGLFY 296 (359)
T ss_pred H---------------HHHHHHHHhcCCC--C-CCHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 7 3555554432221 1 2222222222333 2223 35556667778888989998888877
Q ss_pred eeCCCcceEEEEEcC
Q 018318 337 VTGGTENHLVLWDLR 351 (358)
Q Consensus 337 ~~~~~~~~~~~v~~~ 351 (358)
.+ ..+..+|+++.
T Consensus 297 ~~--~~g~~i~~~~~ 309 (359)
T PRK03158 297 YP--SQTNFIFVDTG 309 (359)
T ss_pred CC--CcCcEEEEECC
Confidence 54 34556888863
No 209
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.77 E-value=8.4e-17 Score=150.34 Aligned_cols=265 Identities=20% Similarity=0.204 Sum_probs=175.8
Q ss_pred cceeEeccCCCC--CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC-CCCCCCCccccccCCh-
Q 018318 32 RGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-LDPTQWGVNVQPYSGS- 107 (358)
Q Consensus 32 ~~~~l~a~~~~~--~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g-~~~~~~~~~v~~~sGt- 107 (358)
..+.+.+++|+. |+.+.+++...+.. . .-||.. ...++ ++.+++++| .+.+ .|..++|+
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~-~-~rYPd~-------~~~~l----~~a~a~~~~~~~~~----~V~~gnGsd 85 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDK-L-NRYPDP-------DYREL----RAALAEYYGVVDPE----NVLVGNGSD 85 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHh-h-ccCCCC-------cHHHH----HHHHHHHhCCCCcc----eEEEcCChH
Confidence 357788888876 58888887766531 1 124332 12234 377889999 5553 46668887
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 108 ~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
+.+..++.+++.|||+|+++.|+|+.+. ..++..|+.+..+ +.+ ++.+|++.+.+.+.+ ++++|++
T Consensus 86 e~i~~l~~~~~~~gd~vl~~~Ptf~~Y~---------~~a~~~g~~~~~v--~~~--~~~~d~~~~~~~~~~-~~~lv~i 151 (356)
T COG0079 86 ELIELLVRAFVEPGDTVLIPEPTFSMYE---------IAAQLAGAEVVKV--PLK--EFRLDLDAILAAIRD-KTKLVFL 151 (356)
T ss_pred HHHHHHHHHhhcCCCEEEEcCCChHHHH---------HHHHhcCCeEEEe--ccc--ccccCHHHHHHhhhc-CCCEEEE
Confidence 4888889999999999999999886542 1234566544444 433 278999999999986 7999999
Q ss_pred cCCCCCC--ccchHHHHHHHHHh--CCEEEEechhhhhhhhccccCCCCCccc--EEEecCCccC--CCCCeeEEEEeCC
Q 018318 188 GGSAYPR--DWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFEYCH--IVTTTTHKSL--RGPRAGMIFYRKG 259 (358)
Q Consensus 188 ~~~~~~~--~~~l~~i~~la~~~--g~~lvvD~a~~~g~~~~~~~~~~~~~~d--~~~~s~~K~l--~g~~gG~i~~~~~ 259 (358)
|+|+||+ ..+.++|.+++... +++||+|+| +..+...... ..+...+ +++.|++|.+ +|.|.||.+.+.
T Consensus 152 ~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEA-Y~eF~~~~~~-~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~- 228 (356)
T COG0079 152 CNPNNPTGTLLPREELRALLEALPEGGLVVIDEA-YIEFSPESSL-ELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP- 228 (356)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc-hhhcCCchhh-hhccCCCCEEEEEecHHhhhcchhceeeccCCH-
Confidence 9999883 44555555555433 889999999 4454431111 1111233 7888999975 688899988877
Q ss_pred CCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCce-eee
Q 018318 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYS-LVT 338 (358)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~-~~~ 338 (358)
++.+.+++...|+.. +....++..++++. .+...+.+++..+.++++.+.|+..|+. +++
T Consensus 229 --------------~~i~~l~~vr~p~~v---~~~a~~aa~aal~~--~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p 289 (356)
T COG0079 229 --------------ELIAALNKVRPPFNV---SSPALAAAIAALRD--ADYLEESVERIREERERLYAALKALGLFGVFP 289 (356)
T ss_pred --------------HHHHHHHHhcCCCCC---CHHHHHHHHHHccc--HHHHHHHHHHHHHHHHHHHHHHHhCCCCeecC
Confidence 466777766555421 11222222222222 1345788888999999999999999854 553
Q ss_pred CCCcceEEEEEcC
Q 018318 339 GGTENHLVLWDLR 351 (358)
Q Consensus 339 ~~~~~~~~~v~~~ 351 (358)
+.++.+++++.
T Consensus 290 --S~aNFvlv~~~ 300 (356)
T COG0079 290 --SQANFVLVRVP 300 (356)
T ss_pred --CCCcEEEEECC
Confidence 55777888875
No 210
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.77 E-value=9.1e-17 Score=152.20 Aligned_cols=264 Identities=19% Similarity=0.156 Sum_probs=169.8
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
+.+.+..+++. +++.+++++.+.+.. . ..|+.. ...+++ +.+++++|++++ .|++++|+ +
T Consensus 33 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~-------~~~~lr----~~ia~~~~~~~~----~i~~t~G~~~ 95 (367)
T PRK02731 33 DIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG-------SGFELK----AALAEKFGVDPE----RIILGNGSDE 95 (367)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC-------cHHHHH----HHHHHHhCcCHH----HEEEcCCHHH
Confidence 45666666544 478888888776532 2 233321 112444 778889998764 35567776 4
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.+++++||+|++..|.|..+.. .....|.. ++.++. +++.+|++++++++++ ++++|+++
T Consensus 96 ~l~~~~~~l~~~gd~vl~~~p~y~~~~~---------~~~~~g~~--~~~~~~--~~~~~~~~~l~~~~~~-~~~~v~l~ 161 (367)
T PRK02731 96 ILELLARAYLGPGDEVIYSEHGFAVYPI---------AAQAVGAK--PVEVPA--KDYGHDLDAMLAAVTP-RTRLVFIA 161 (367)
T ss_pred HHHHHHHHhcCCCCEEEEecCCHHHHHH---------HHHHcCCe--EEEecc--cCCCCCHHHHHHHhCC-CCcEEEEe
Confidence 7777788889999999999987754321 12345654 344443 3578999999999864 78999888
Q ss_pred CCCCC--CccchHHHHHHHHHh--CCEEEEechhhhhhhhccccCCCC---C--cccEEEecCCccC--CCCCeeEEEEe
Q 018318 189 GSAYP--RDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPF---E--YCHIVTTTTHKSL--RGPRAGMIFYR 257 (358)
Q Consensus 189 ~~~~~--~~~~l~~i~~la~~~--g~~lvvD~a~~~g~~~~~~~~~~~---~--~~d~~~~s~~K~l--~g~~gG~i~~~ 257 (358)
+++|| ...+.+++.++++.+ |+++++|+++.. +...+.....+ + .-.+++.|++|.+ +|.+.|+++++
T Consensus 162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~ 240 (367)
T PRK02731 162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAE-YVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP 240 (367)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHH-hccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC
Confidence 88776 567888999888875 999999999643 33221111111 1 2237788999986 46677999987
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCcee
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSL 336 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~ 336 (358)
+ ++.+.+.....+. +.+... ..++...+...+ .++..++.+++++++.+.|++.|+++
T Consensus 241 ~---------------~~~~~l~~~~~~~---~~~~~~---~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 299 (367)
T PRK02731 241 P---------------EIIDALNRVRQPF---NVNSLA---LAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELGLEY 299 (367)
T ss_pred H---------------HHHHHHHHccCCC---CCCHHH---HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 7 3555554332221 112122 222333333233 35667777888899999999989877
Q ss_pred eeCCCcceEEEEEc
Q 018318 337 VTGGTENHLVLWDL 350 (358)
Q Consensus 337 ~~~~~~~~~~~v~~ 350 (358)
.+ ..+..+|+.+
T Consensus 300 ~~--~~g~~~~i~~ 311 (367)
T PRK02731 300 IP--SVGNFILVDF 311 (367)
T ss_pred CC--CCceEEEEEC
Confidence 53 4567889987
No 211
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.76 E-value=2.1e-16 Score=148.13 Aligned_cols=247 Identities=18% Similarity=0.170 Sum_probs=155.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCC--CCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 73 EFIDEIENLCRSRALQTFHLD--PTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~--~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
....++++.+++.+...++.. .. ..+++++|++++..++.++.++||+|+++.+.|.++.. .++..
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~~---~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~---------~~~~~ 103 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPPE---EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA---------AARLA 103 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcc---eEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH---------HHHHC
Confidence 344566655556666555421 22 23445566789999999999999999999988776531 23445
Q ss_pred cceeEEeecccCCCCCCCCH--HHHHHHHhhcCCcEEEEcCCCCC--CccchH---HHHHHHHHhCCEEEEechhhhhhh
Q 018318 151 SIYFESLPYKVNSSTGYIDY--DKLEEKALDFRPKLIICGGSAYP--RDWDYA---RFRAVADKCGALLLCDMAHISGLV 223 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~--~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~---~i~~la~~~g~~lvvD~a~~~g~~ 223 (358)
+.. ++.++.+ +++..+. +.++.+.. .++++|++.+++++ ...|++ +|.++|+++|+++++|++|+.+..
T Consensus 104 ~~~--~~~i~~~-~~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~ 179 (350)
T cd00609 104 GAE--VVPVPLD-EEGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVY 179 (350)
T ss_pred CCE--EEEEecc-cccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhcee
Confidence 543 4444443 2344444 56665543 47888887766544 455544 555899999999999999865432
Q ss_pred hccccC---CCCC--cccEEEecCCccCC--CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHH
Q 018318 224 AAQEAA---NPFE--YCHIVTTTTHKSLR--GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (358)
Q Consensus 224 ~~~~~~---~~~~--~~d~~~~s~~K~l~--g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (358)
.+... ...+ +.|++++|++|+++ |++.|+++++++ ++.+.+....... ..+++....
T Consensus 180 -~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~ 243 (350)
T cd00609 180 -DGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE--------------ELLERLKKLLPYT-TSGPSTLSQ 243 (350)
T ss_pred -CCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH--------------HHHHHHHHHHHhc-ccCCChHHH
Confidence 22111 1122 67899999999984 556799998873 3444444332221 233444555
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 297 ~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
.++..+++... ++++...+++.++++++.+.|.+.+......+..+..+|+.+..
T Consensus 244 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~ 298 (350)
T cd00609 244 AAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPE 298 (350)
T ss_pred HHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCC
Confidence 55555555432 35677788899999999999999866442224567778877643
No 212
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.76 E-value=2.4e-16 Score=151.41 Aligned_cols=289 Identities=15% Similarity=0.084 Sum_probs=169.9
Q ss_pred cceeEecc-CC-----CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC--CCCCCCCccccc
Q 018318 32 RGIELIAS-EN-----FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH--LDPTQWGVNVQP 103 (358)
Q Consensus 32 ~~~~l~a~-~~-----~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g--~~~~~~~~~v~~ 103 (358)
+.+.|..+ ++ .+|+.+.+++.+.+......+|... .|. .++.+.+.+++.+.+| ++++ .|++
T Consensus 33 ~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~---~G~---~~lr~aia~~~~~~~g~~~~~~----~I~i 102 (409)
T PLN00143 33 LAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPT---GGI---LPARRAIADYLSNDLPYQLSPD----DVYL 102 (409)
T ss_pred ceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCC---CCC---HHHHHHHHHHHHhhcCCCCCHh----hEEE
Confidence 44666654 33 4588888988776653211234221 122 2344444455555544 3433 3545
Q ss_pred cCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccC-CCCCCCCHHHHHHHHhhcC
Q 018318 104 YSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN-SSTGYIDYDKLEEKALDFR 181 (358)
Q Consensus 104 ~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~id~~~l~~~l~~~~ 181 (358)
++| ++++..++.++++|||.|++..|.|..+.. .+...|..+ +.++.+ ++++.+|++++++++++ +
T Consensus 103 t~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~---------~~~~~g~~~--~~~~~~~~~~~~~d~~~l~~~~~~-~ 170 (409)
T PLN00143 103 TLGCKHAAEIIIKVLARPEANILLPRPGFPDVET---------YAIFHHLEI--RHFDLLPEKGWEVDLDAVEAIADE-N 170 (409)
T ss_pred ecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH---------HHHHcCCEE--EEEeccCCCCCcCCHHHHHHhccc-C
Confidence 666 569999999999999999999998875431 223456544 334332 23467999999998864 6
Q ss_pred CcEEEEcCCCCCC--ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---Cc--ccEEEecCCccC--CCC
Q 018318 182 PKLIICGGSAYPR--DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY--CHIVTTTTHKSL--RGP 249 (358)
Q Consensus 182 ~~~v~~~~~~~~~--~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~~--~d~~~~s~~K~l--~g~ 249 (358)
++++++++|+||+ ..+ +++|.++|++|++++|+|+++ ..+.+.+....++ +. --+++.|++|.+ +|.
T Consensus 171 ~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl 249 (409)
T PLN00143 171 TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVY-GHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGW 249 (409)
T ss_pred CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccc-cccccCCCCCcchhhhcccCcEEEEccchhhcCCCcc
Confidence 7778888888873 333 778999999999999999994 4554433211122 21 237889999984 678
Q ss_pred CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 018318 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (358)
Q Consensus 250 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (358)
|.|++++++... .+......+.+.....+... .+.....++..++.......+++..++++++++++.+.|
T Consensus 250 RvG~~v~~~p~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L 320 (409)
T PLN00143 250 GLGWLVTCDPSG-------LLQICEIADSIKKALNPAPF--PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKL 320 (409)
T ss_pred ceEEEEeeCchh-------hhhhHHHHHHHHHHHhccCC--CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999853200 00000011222221111111 111222222333321111234677788888888999999
Q ss_pred hhCCcee-eeCCCcceEEEEEcCC
Q 018318 330 TGKGYSL-VTGGTENHLVLWDLRP 352 (358)
Q Consensus 330 ~~~G~~~-~~~~~~~~~~~v~~~~ 352 (358)
.+.+... ...+..+..+|+++..
T Consensus 321 ~~~~~~~~~~~p~gg~f~w~~l~~ 344 (409)
T PLN00143 321 KEIPCIMCPQKAEGAFFALVKLNL 344 (409)
T ss_pred hcCCCCCCCCCCCeeEEEEEecch
Confidence 8875322 2234678899999864
No 213
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.76 E-value=1.3e-16 Score=162.49 Aligned_cols=255 Identities=15% Similarity=0.133 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--------CCCCeEEEecCCCCccccccccccCCcc
Q 018318 75 IDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--------EPHDRIMGLDLPSGGHLTHGYYTSGGKK 146 (358)
Q Consensus 75 ~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 146 (358)
..+++.+...|+++++|.+. +.+..++|+.|..+++.++. ...++|+++...|+.++. .
T Consensus 528 ~lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa---------s 594 (939)
T TIGR00461 528 YQELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA---------S 594 (939)
T ss_pred HHHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH---------H
Confidence 44555567799999999996 35777888887776665553 134578888888876542 2
Q ss_pred cccccceeEEeecccCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCC-CCCccc-hHHHHHHHHHhCCEEEEechhhhhh
Q 018318 147 ISATSIYFESLPYKVNSSTGYIDYDKLEEKALD--FRPKLIICGGSA-YPRDWD-YARFRAVADKCGALLLCDMAHISGL 222 (358)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~--~~~~~v~~~~~~-~~~~~~-l~~i~~la~~~g~~lvvD~a~~~g~ 222 (358)
+...|.++ +.++.+ ++|.+|+++|++++++ .++++|++.+++ +|...+ +++|+++||++|+++++|+||..++
T Consensus 595 a~~~G~~V--v~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 595 AAMAGMQV--VPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred HHHCCCEE--EEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhC
Confidence 34556544 444544 4789999999999975 367778776544 565545 9999999999999999999997654
Q ss_pred hhccccCCCCC-cccEEEecCCccCC-----CCCe-eEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCC-CChh
Q 018318 223 VAAQEAANPFE-YCHIVTTTTHKSLR-----GPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGG-PHNH 294 (358)
Q Consensus 223 ~~~~~~~~~~~-~~d~~~~s~~K~l~-----g~~g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 294 (358)
.. ...+-+ ++|++++|.||+|+ |++| |++++++.+.+..++.......+...+ ... .+..++ +...
T Consensus 672 ~~---l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~gr-eq~--Iga~s~~~~g~ 745 (939)
T TIGR00461 672 VG---LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGG-SKS--IGSVSAAPYGS 745 (939)
T ss_pred CC---CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCC-ccc--cccccccccCc
Confidence 32 112233 89999999999986 4455 899998764432232211110000000 000 000111 1111
Q ss_pred -HH-HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCC---CcceEEEEEcCC
Q 018318 295 -QI-GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG---TENHLVLWDLRP 352 (358)
Q Consensus 295 -~~-~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~---~~~~~~~v~~~~ 352 (358)
.+ ...+.-++.+..+++.+..+....|++|+++.|.+ ++++..+. ..-|-+.+++++
T Consensus 746 a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~ 807 (939)
T TIGR00461 746 ASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRP 807 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccc
Confidence 11 11233445555567888888899999999999987 67664421 234668888774
No 214
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.76 E-value=2.7e-19 Score=162.40 Aligned_cols=262 Identities=19% Similarity=0.194 Sum_probs=163.0
Q ss_pred cCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc
Q 018318 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL 118 (358)
Q Consensus 39 ~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~ 118 (358)
|.+ ++|+++++|.+..... ..|++.+...++| ++++++||.+. .+++.+||.||..++.+++
T Consensus 4 SD~-~~~~m~~a~~~a~~gd--------~~Yg~D~~~~~l~----~~i~~l~g~e~-----a~f~~sGT~An~~al~~~~ 65 (290)
T PF01212_consen 4 SDT-PTPAMLEAMAAANVGD--------DAYGEDPTTARLE----ERIAELFGKEA-----ALFVPSGTMANQLALRAHL 65 (290)
T ss_dssp -SS-S-HHEEHHHHHTTSB---------CCTTSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHHH
T ss_pred ccC-CCHHHHHHHHccccCC--------cccCCChhHHHHH----HHHHHHcCCCE-----EEEeCCCChHHHHHHHHHH
Confidence 444 7899999985443221 1256678888888 78999999886 3678899999999999999
Q ss_pred CCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh-----cCCcEEEEcCCCC-
Q 018318 119 EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD-----FRPKLIICGGSAY- 192 (358)
Q Consensus 119 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~-----~~~~~v~~~~~~~- 192 (358)
+|++.|++... +|+.. ...+....+.|.+ +++++.+ +++.+|+++|++.++. .+|++|+++.+++
T Consensus 66 ~~~~~vi~~~~---aHi~~---~E~ga~~~~~G~~--~~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~ 136 (290)
T PF01212_consen 66 RPGESVICADT---AHIHF---DETGAIEELSGAK--LIPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTEL 136 (290)
T ss_dssp HTTEEEEEETT---EHHHH---SSTTHHHHHTTCE--EEEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTT
T ss_pred hcCCceecccc---ceeee---eccchhhHhcCcE--EEECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcC
Confidence 99999999875 33311 1111112345654 4454432 2389999999999987 3468888887654
Q ss_pred --CCcc---chHHHHHHHHHhCCEEEEechhhhhhh-hccccCCCC-CcccEEEecCCccCCCCCeeEEEEeCCCCCCCC
Q 018318 193 --PRDW---DYARFRAVADKCGALLLCDMAHISGLV-AAQEAANPF-EYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKK 265 (358)
Q Consensus 193 --~~~~---~l~~i~~la~~~g~~lvvD~a~~~g~~-~~~~~~~~~-~~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~ 265 (358)
|.+. .+++|.++||+||+.++.|+|...-.. ..+.....+ .++|++++|++|.++.|-|++++++++
T Consensus 137 ~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~------ 210 (290)
T PF01212_consen 137 AGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKE------ 210 (290)
T ss_dssp TTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHH------
T ss_pred CCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechH------
Confidence 5444 577889999999999999998532211 111101111 389999999999988788888888884
Q ss_pred CCCCCccccHHHHh--hhhcCCCC-cCCCChhHHHH----HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 266 GQPEGAVYDFEDKI--NFAVFPSL-QGGPHNHQIGA----LAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 266 ~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~a----l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
.+.+.. .+..-..+ +.+ .+++ ...++..+. .+.....+..+++++|.+.|+..|+.+..
T Consensus 211 --------~i~~~~~~~k~~gg~~~~~G----~~~a~~~~~~~~l~~l~--~~~~~~~~~~~~A~~La~~l~~~~~~~~~ 276 (290)
T PF01212_consen 211 --------FIAKARRQRKRLGGGMRQAG----VLAAAELYQFAALRALE--LWLERARHANAMAKRLAAGLEALGGVLPR 276 (290)
T ss_dssp --------HHHHHHHHHHHHTHHHHHTT----HHHHHHHHHHHHHCHEE--CSHHHHHCHHHHHHCHHHCHHEECEEEET
T ss_pred --------HHHHHHHHHHHhccCeeecc----eeeeechhhHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 121111 11100000 000 1122 012222221 22456677888899999999999988654
Q ss_pred CCCcceEEEE
Q 018318 339 GGTENHLVLW 348 (358)
Q Consensus 339 ~~~~~~~~~v 348 (358)
+..++.+++
T Consensus 277 -~~~tn~~~~ 285 (290)
T PF01212_consen 277 -PVETNQVFV 285 (290)
T ss_dssp -TSS-HHHHH
T ss_pred -CCCCcEEeE
Confidence 455555444
No 215
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.76 E-value=5.8e-16 Score=148.08 Aligned_cols=295 Identities=16% Similarity=0.088 Sum_probs=176.0
Q ss_pred cccchHHHHHHHHHHHHh-----hcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 018318 13 ETVDPEIHDLIEKEKRRQ-----CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSR 85 (358)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~-----~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~ 85 (358)
...+.+.+..+...+... +..+.|..+++. +|+.+.+++.+.+... ..|+.. .| ..++.+.+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~--~~Y~~~---~G---~~~lr~aia~~ 76 (393)
T TIGR03538 5 SRLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHGL--STYPTT---KG---LPELRQAIARW 76 (393)
T ss_pred hhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhcc--CCCCCC---CC---CHHHHHHHHHH
Confidence 334455555454444322 356667665543 4788999988765321 233321 12 23444444566
Q ss_pred HHHhcCCC----CCCCCccccccCC-hHHHHHHHHhhcCCCCe--EEEecCCCCccccccccccCCcccccccceeEEee
Q 018318 86 ALQTFHLD----PTQWGVNVQPYSG-SPANFAAYTAVLEPHDR--IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLP 158 (358)
Q Consensus 86 la~~~g~~----~~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 158 (358)
+.+.+|.. +++ .|+.++| ++|+..++.++++|||. |+++.|.|..+.. .+...|+. ++.
T Consensus 77 ~~~~~~~~~~~~~~~---~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~---------~~~~~g~~--~~~ 142 (393)
T TIGR03538 77 LERRFDLPTGVDPER---HVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG---------AALLAGAE--PYF 142 (393)
T ss_pred HHHhhCCcccCCCCc---eEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH---------HHHhcCCe--EEE
Confidence 66665543 321 2555666 56999999999999996 8888887754321 22345654 444
Q ss_pred cccCCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCC
Q 018318 159 YKVNSS-TGYIDYDKLEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQE-AANP 231 (358)
Q Consensus 159 ~~~~~~-~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~ 231 (358)
++.+++ ++.+|++++++++.+ ++|+|++++++||+ .. .+++|.++|++||+++|+|+++. .+.+.+. ...+
T Consensus 143 v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~ 220 (393)
T TIGR03538 143 LNCTAENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYS-ELYFDEGNPPAG 220 (393)
T ss_pred eeccccCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchh-hcccCCCCCCcC
Confidence 454433 357899999998865 78999888888873 33 47899999999999999999954 3333211 1111
Q ss_pred -C---C--c-----ccEEEecCCcc--CCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHH
Q 018318 232 -F---E--Y-----CHIVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGA 298 (358)
Q Consensus 232 -~---~--~-----~d~~~~s~~K~--l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 298 (358)
+ . + --+++.|++|. ++|.|.|+++++++ +.+.+......... +.+.....+
T Consensus 221 ~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~---------------l~~~~~~~~~~~~~-~~~~~~q~~ 284 (393)
T TIGR03538 221 LLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAE---------------ILKAFLRYRTYHGC-AMPIPTQLA 284 (393)
T ss_pred HHHhcccccccccccEEEEecchhhcCCcccceEEEecCHH---------------HHHHHHHHHHhhcc-CcCHHHHHH
Confidence 0 0 1 12788999996 46788899998773 44444332111111 112222222
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 299 LAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 299 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
+..++. ....+...+++++++++.+.+.|++. +.+. .+..+..+|+++.
T Consensus 285 ~~~~l~--~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~-~p~gg~f~~~~~~ 333 (393)
T TIGR03538 285 SIAAWN--DEQHVRENRALYREKFAAVLEILGQV-LDLE-LPDAGFYLWPKVP 333 (393)
T ss_pred HHHHhc--ChHHHHHHHHHHHHHHHHHHHHHHhh-Cccc-CCCeeEEEEEECC
Confidence 222221 11234566677788888888888775 4433 2567888999875
No 216
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.76 E-value=2.7e-17 Score=155.38 Aligned_cols=210 Identities=19% Similarity=0.154 Sum_probs=137.5
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (358)
+.+...+|| +++++++ .+. .+++++|+.|+..++.+++++||+|+++.+.|++..... . ..+...
T Consensus 49 ~~p~~~~Le----~~lA~l~-~~~-----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~--~---~~l~~~ 113 (366)
T PRK07582 49 SNPTWRALE----AALGELE-GAE-----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALA--R---EYLAPL 113 (366)
T ss_pred CCccHHHHH----HHHHHHc-CCC-----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH--H---HHHhcC
Confidence 345566787 6788888 232 477899999999999999999999999988775432110 0 011223
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
|+ +++.++.+. . .+ .+. .++++|++++++|+ ...|+++|+++|+++|+++++|++|+....
T Consensus 114 G~--~v~~v~~~~-~----~~----~~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~----- 176 (366)
T PRK07582 114 GV--TVREAPTAG-M----AE----AAL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLG----- 176 (366)
T ss_pred eE--EEEEECCCC-h----HH----Hhc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccc-----
Confidence 54 444444321 1 11 222 36789988888887 367999999999999999999999754321
Q ss_pred CCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHH
Q 018318 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 229 ~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 304 (358)
..+++ ++|++++|+||+++|+. +|+++++++ ++.+.+....... ...+. + +. .+.+++
T Consensus 177 ~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~--------------~l~~~l~~~~~~~-g~~~~-~-~~-a~l~~r 238 (366)
T PRK07582 177 QRPLELGADLVVASDTKALTGHSDLLLGYVAGRDP--------------ELMAAVERWRLLA-GAIPG-P-FE-AWLAHR 238 (366)
T ss_pred cCchhcCCcEEEecccccccCCCCeeEEEEEcCcH--------------HHHHHHHHHHHHh-CCCCC-H-HH-HHHHHh
Confidence 12444 78999999999998865 488887653 4444444321111 11111 1 11 122333
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
.+ ..++.++++.++|+..+.++|+++
T Consensus 239 ~l--~tl~~R~~~~~~na~~la~~L~~~ 264 (366)
T PRK07582 239 SL--GTLGLRFARQCANALAVAELLAGH 264 (366)
T ss_pred cc--ccHHHHHHHHHHHHHHHHHHHHhC
Confidence 32 235677899999999999999987
No 217
>PRK03321 putative aminotransferase; Provisional
Probab=99.75 E-value=7.6e-17 Score=151.88 Aligned_cols=266 Identities=17% Similarity=0.163 Sum_probs=167.9
Q ss_pred ceeEeccCC-C-CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChH-H
Q 018318 33 GIELIASEN-F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP-A 109 (358)
Q Consensus 33 ~~~l~a~~~-~-~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~-a 109 (358)
.+.|..+.+ . +++.+.+++.+.+.. . ..|+. .....+ ++.++++++++++ .|++++|+. +
T Consensus 24 ~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~-------~g~~~l----r~~ia~~~~~~~~----~I~~~~G~~~~ 86 (352)
T PRK03321 24 AIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD-------MGAVEL----RAALAEHLGVPPE----HVAVGCGSVAL 86 (352)
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC-------CcHHHH----HHHHHHHhCcCHH----HEEECCCHHHH
Confidence 466666544 3 578999998776532 1 12321 223344 4778889998764 355677765 6
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
+..++.++++|||+|+++.+.+..+.. .++..|.. ++.++.++ ++.+|++++++++++ ++++|++++
T Consensus 87 l~~~~~~~~~~gd~Vli~~p~y~~~~~---------~~~~~g~~--~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~ 153 (352)
T PRK03321 87 CQQLVQATAGPGDEVIFAWRSFEAYPI---------LVQVAGAT--PVQVPLTP-DHTHDLDAMAAAITD-RTRLIFVCN 153 (352)
T ss_pred HHHHHHHhcCCCCEEEeCCCCHHHHHH---------HHHHcCCE--EEEccCCC-CCCCCHHHHHHhhcc-CCCEEEEeC
Confidence 777778889999999998876543210 12345554 44455442 468999999999865 789888887
Q ss_pred CCCC--CccchHHHHHHHHH--hCCEEEEechhhhhhhhccccCCCC---C-c-ccEEEecCCccCC--CCCeeEEEEeC
Q 018318 190 SAYP--RDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPF---E-Y-CHIVTTTTHKSLR--GPRAGMIFYRK 258 (358)
Q Consensus 190 ~~~~--~~~~l~~i~~la~~--~g~~lvvD~a~~~g~~~~~~~~~~~---~-~-~d~~~~s~~K~l~--g~~gG~i~~~~ 258 (358)
++|| ...|.++|.++|+. +++++++|+++. .+.+.+.....+ + . --+++.|++|.|+ |.|.|++++++
T Consensus 154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAYV-EYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHH-HhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 7776 56789999999987 599999999964 443322111111 1 1 2267889999874 66779999876
Q ss_pred CCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 259 GPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
++.+.+.....+. +.+.....+..+++.. ...+.+..++..++++++.+.|.+.|+.+..
T Consensus 233 ---------------~~~~~~~~~~~~~---~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~ 292 (352)
T PRK03321 233 ---------------EVIAALRKVAVPF---SVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVPP 292 (352)
T ss_pred ---------------HHHHHHHHhcCCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence 4555555432111 1222222222233321 1334555666677778899999988887543
Q ss_pred CCCcceEEEEEcC
Q 018318 339 GGTENHLVLWDLR 351 (358)
Q Consensus 339 ~~~~~~~~~v~~~ 351 (358)
..+..+|+++.
T Consensus 293 --~~g~~i~i~l~ 303 (352)
T PRK03321 293 --SQANFVWLPLG 303 (352)
T ss_pred --CCCCEEEEeCC
Confidence 34566888863
No 218
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.75 E-value=2e-16 Score=149.27 Aligned_cols=265 Identities=10% Similarity=0.038 Sum_probs=160.6
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
+.+.|..++++ +|+.+++++.+.+.. . ..|+. .... ..|+.++++++++++ .|++++|+ +
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~-------~~~~----~lr~~ia~~~~~~~~----~i~it~Ga~~ 83 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPD-------VEYR----HLHQALARHHQVPAS----WILAGNGETE 83 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcC-------ccHH----HHHHHHHHHhCcChh----hEEECCCHHH
Confidence 45777777664 588999998766532 1 12332 1122 345788899998874 35567775 5
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhcCCcEEEE
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
++..++.++ .+|| +++..|.|..+. ..++..|..+..+ +.+++ ++.+| +++++.+. .++++|++
T Consensus 84 ~l~~~~~~l-~~g~-viv~~P~y~~~~---------~~~~~~g~~~~~v--~~~~~~~~~~~-~~~~~~~~-~~~k~v~l 148 (356)
T PRK08056 84 SIFAVVSGL-KPRR-AMIVTPGFAEYR---------RALQQVGCEIRRY--SLREADGWQLT-DAILEALT-PDLDCLFL 148 (356)
T ss_pred HHHHHHHHh-CCCC-EEEeCCCcHHHH---------HHHHHcCCeEEEE--ecccccCCCcc-HHHHHhcc-CCCCEEEE
Confidence 887777765 6776 566666654322 1234456544444 43322 34555 35555554 47899988
Q ss_pred cCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCCCC--cccEEEecCCccC--CCCCeeEEEEe
Q 018318 188 GGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQE-AANPFE--YCHIVTTTTHKSL--RGPRAGMIFYR 257 (358)
Q Consensus 188 ~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~~~--~~d~~~~s~~K~l--~g~~gG~i~~~ 257 (358)
++++|| ...+ +++|+++|+++|+++|+|+++ .++...+. ....+. ...+++.|+||++ +|.|.|+++++
T Consensus 149 ~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 227 (356)
T PRK08056 149 CTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAF-IDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNS 227 (356)
T ss_pred eCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecch-hccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecC
Confidence 888887 3445 788999999999999999994 34432211 001122 3468899999986 46678999886
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHhhC-Cce
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF-KAYAKQVKANAVALGNYLTGK-GYS 335 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-G~~ 335 (358)
++ ++.+.+.....+. ....++ ..++...+....+ ...++++.++++++.+.|++. |+.
T Consensus 228 ~~--------------~~~~~l~~~~~~~-----~~~~~~-~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~ 287 (356)
T PRK08056 228 DD--------------AAVARMRRQQMPW-----SINAFA-ALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLT 287 (356)
T ss_pred CH--------------HHHHHHHHhCCCC-----chhHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 53 3444444322111 111122 1222222222233 455677888899999999887 777
Q ss_pred eeeCCCcceEEEEEcC
Q 018318 336 LVTGGTENHLVLWDLR 351 (358)
Q Consensus 336 ~~~~~~~~~~~~v~~~ 351 (358)
+.. +.+..+|+++.
T Consensus 288 ~~~--~~~~~~~~~~~ 301 (356)
T PRK08056 288 VWP--GRANYLFLRCE 301 (356)
T ss_pred EcC--CCCcEEEEEcC
Confidence 654 34566888874
No 219
>PRK09105 putative aminotransferase; Provisional
Probab=99.75 E-value=1.6e-16 Score=150.47 Aligned_cols=262 Identities=20% Similarity=0.112 Sum_probs=165.5
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC-hH
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SP 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG-t~ 108 (358)
..+.|..+++. +|+.+.+++.+.+.. . ..|+. ....+| |+.+++++|+++++ |++++| ++
T Consensus 44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~Y~~-------~~~~~L----r~aia~~~~v~~e~----I~it~Gs~~ 106 (370)
T PRK09105 44 GAVFLNANECPLGPSPAARDAAARSAAL-S-GRYDL-------ELEDDL----RTLFAAQEGLPADH----VMAYAGSSE 106 (370)
T ss_pred CcEEecCCCCCCCCCHHHHHHHHHHHHH-h-cCCCC-------chHHHH----HHHHHHHhCcChhh----EEEcCChHH
Confidence 34667766653 489999998776532 1 12321 112233 47788899998753 445665 56
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.+++++||+|++++|.|..+.. .++..|..+. .++.+ +++.+|++.+++. . .++++|+++
T Consensus 107 ai~~~~~~l~~~gd~Vli~~P~y~~~~~---------~~~~~g~~~~--~v~~~-~~~~~d~~~l~~~-~-~~~~~v~l~ 172 (370)
T PRK09105 107 PLNYAVLAFTSPTAGLVTADPTYEAGWR---------AADAQGAPVA--KVPLR-ADGAHDVKAMLAA-D-PNAGLIYIC 172 (370)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHH---------HHHHcCCeEE--EecCC-CCCCCCHHHHHhc-C-CCCCEEEEe
Confidence 9999999999999999999998875431 2344565444 44434 2567999999876 3 367888888
Q ss_pred CCCCC--CccchHHHHHHHHH--hCCEEEEechhhhhhhhccccCCCC-C-ccc-EEEecCCccC--CCCCeeEEEEeCC
Q 018318 189 GSAYP--RDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPF-E-YCH-IVTTTTHKSL--RGPRAGMIFYRKG 259 (358)
Q Consensus 189 ~~~~~--~~~~l~~i~~la~~--~g~~lvvD~a~~~g~~~~~~~~~~~-~-~~d-~~~~s~~K~l--~g~~gG~i~~~~~ 259 (358)
+|+|| ...+.++|.++++. +|+++|+|+++. .+..... ...+ + +.+ +++.|++|++ +|.|.|++++++
T Consensus 173 nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~-~f~~~~s-~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~- 249 (370)
T PRK09105 173 NPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYI-HFSDAPS-VVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP- 249 (370)
T ss_pred CCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchH-HhccCcc-hHHHHhhCCCEEEEecccHhhcCCccceeeeecCH-
Confidence 88887 45677777776653 489999999963 3221100 0011 1 334 6678999986 466789999877
Q ss_pred CCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
++.+.+... .. ...+.....+...++ ...+ ++...++..++++++.+.|++.|+++..
T Consensus 250 --------------~~i~~l~~~-~~---~~~~~~~~~aa~~~L---~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~ 308 (370)
T PRK09105 250 --------------DLLAKLARF-GH---NPLPVPAAAAGLASL---RDPKLVPQRRAENAAVREDTIAWLKKKGYKCTP 308 (370)
T ss_pred --------------HHHHHHHhc-CC---CCcCHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCC
Confidence 344444432 11 112222222222333 2233 3566678888999999999999988764
Q ss_pred CCCcceEEEEEc
Q 018318 339 GGTENHLVLWDL 350 (358)
Q Consensus 339 ~~~~~~~~~v~~ 350 (358)
+..++ +++++
T Consensus 309 -~~~~f-~~~~~ 318 (370)
T PRK09105 309 -SQANC-FMVDV 318 (370)
T ss_pred -CCCcE-EEEeC
Confidence 34444 45665
No 220
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.75 E-value=7.6e-17 Score=156.73 Aligned_cols=236 Identities=17% Similarity=0.133 Sum_probs=146.1
Q ss_pred HHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeec
Q 018318 81 LCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY 159 (358)
Q Consensus 81 ~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (358)
+.++++++++|++.++ .+++++|+.++..++.++ .++||+|+++.+.|+++..... ......|. +++.+
T Consensus 116 e~~~~la~l~g~~~~~---v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~-----~~~~~~G~--~~~~v 185 (447)
T PRK00451 116 EYQTMICELTGMDVAN---ASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLK-----TYLKGQGI--EVVEV 185 (447)
T ss_pred HHHHHHHHHhCCCcce---EEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHH-----HHHHhCCc--EEEEe
Confidence 4457899999998742 234455566787787777 4799999999988876542110 00112354 44445
Q ss_pred ccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC-CCCccchHHHHHHHHHhCCEEEE--echhhhhhhhccccCCCCC-cc
Q 018318 160 KVNSSTGYIDYDKLEEKALDFRPKLIICGGSA-YPRDWDYARFRAVADKCGALLLC--DMAHISGLVAAQEAANPFE-YC 235 (358)
Q Consensus 160 ~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~-~~~~~~l~~i~~la~~~g~~lvv--D~a~~~g~~~~~~~~~~~~-~~ 235 (358)
+.++ + .+|++++++++.+ ++++|++++++ +|...|+++|+++||++|+++++ |.. +.|... .+.+ ++
T Consensus 186 ~~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~-----~~~~~~~ 256 (447)
T PRK00451 186 PYED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLK-----PPGEYGA 256 (447)
T ss_pred cCCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCC-----CcccCCC
Confidence 5553 4 8999999999965 68888776653 45778999999999999999998 644 444321 1223 89
Q ss_pred cEEEecCCcc-----CCCCCeeEEEEeCCCCC-CC---------CCCCCCc---cccHHHHhhhhcCCCCcCCCChhHHH
Q 018318 236 HIVTTTTHKS-----LRGPRAGMIFYRKGPKP-PK---------KGQPEGA---VYDFEDKINFAVFPSLQGGPHNHQIG 297 (358)
Q Consensus 236 d~~~~s~~K~-----l~g~~gG~i~~~~~~~~-~~---------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (358)
|++++|+||+ ++||+.|++++++++.+ +. ..++.-+ .......++.. ...........+.
T Consensus 257 D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 334 (447)
T PRK00451 257 DIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRRE--KATSNICTNQALN 334 (447)
T ss_pred CEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccc--cccccccccHHHH
Confidence 9999999886 67887799988775322 10 0000000 00000001100 0000001111111
Q ss_pred --HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cceee
Q 018318 298 --ALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLV 337 (358)
Q Consensus 298 --al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~ 337 (358)
+.+.++..+..+++++..+++.++++++.+.|++. |+++.
T Consensus 335 ~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 377 (447)
T PRK00451 335 ALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF 377 (447)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec
Confidence 22233444555567888999999999999999987 68876
No 221
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=1.9e-16 Score=150.19 Aligned_cols=267 Identities=18% Similarity=0.148 Sum_probs=166.2
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
+.+.|..+++. +++.+.+++.+.... . ..|+.. .. ..+ ++.+++++|++.+ .|++++|+ +
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~-~-~~Y~~~------~g-~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAEL-L-RLYPDP------QG-RAL----REAIAARTGVPAD----RIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHH-h-hcCCCC------cH-HHH----HHHHHHHhCcCHH----HEEEcCCHHH
Confidence 44666666543 578888888754322 1 123321 11 234 4778889998764 35567775 5
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.+++++||+|++..|+|+.+.. .++..|+.+ ++++.+ .++.+|++++++++++ ++++|+++
T Consensus 100 ~l~~~~~~~~~~gd~vli~~P~y~~~~~---------~~~~~g~~~--~~v~~~-~~~~~~~~~l~~~~~~-~~~~v~l~ 166 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLYPSFPLHED---------YPTMMGARV--ERVTVT-PDLGFDLDALCAAVAR-APRMLMFS 166 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH---------HHHHcCCeE--EEeecC-CCCCCCHHHHHHhhhc-CCCEEEEe
Confidence 8888888889999999999988764321 224456544 444444 2568999999998865 78998888
Q ss_pred CCCCC--CccchHHHHHHHHH--hCCEEEEechhhhhhhhccccCCCC---C--c-ccEEEecCCccC--CCCCeeEEEE
Q 018318 189 GSAYP--RDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPF---E--Y-CHIVTTTTHKSL--RGPRAGMIFY 256 (358)
Q Consensus 189 ~~~~~--~~~~l~~i~~la~~--~g~~lvvD~a~~~g~~~~~~~~~~~---~--~-~d~~~~s~~K~l--~g~~gG~i~~ 256 (358)
+++|| ...+.+++.++++. .++++++|+++. .+...+..+..+ . + --+++.|++|.+ +|.|.|++++
T Consensus 167 ~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~ 245 (371)
T PRK05166 167 NPSNPVGSWLTADQLARVLDATPPETLIVVDEAYA-EYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV 245 (371)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHH-HhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeec
Confidence 88877 45666666665553 488999999953 444322111111 1 1 237889999986 6778899887
Q ss_pred eCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCce
Q 018318 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYS 335 (358)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~ 335 (358)
.++ ++.+.+.....+. + .+..... +++..+...+ +++.+++..++++++.+.|++.|++
T Consensus 246 ~~~--------------~l~~~~~~~~~~~--~-~~~~~q~---~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~ 305 (371)
T PRK05166 246 SDP--------------ELVGLLDRVRTPF--N-VNGAAQA---AALAALDDEEHLAKGVALALAERERLKKELAEMGYR 305 (371)
T ss_pred CCH--------------HHHHHHHHhccCC--C-CCHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCcCe
Confidence 553 4555554322111 1 2222221 2222222223 4666777888889999999999987
Q ss_pred eeeCCCcceEEEEEcC
Q 018318 336 LVTGGTENHLVLWDLR 351 (358)
Q Consensus 336 ~~~~~~~~~~~~v~~~ 351 (358)
+.+ ..+..+|+++.
T Consensus 306 ~~p--~~g~fl~~~~~ 319 (371)
T PRK05166 306 IAP--SRANFLFFDAR 319 (371)
T ss_pred eCC--CcCCEEEEeCC
Confidence 643 34456798864
No 222
>PRK07049 methionine gamma-lyase; Validated
Probab=99.74 E-value=1.1e-16 Score=153.73 Aligned_cols=223 Identities=19% Similarity=0.182 Sum_probs=149.6
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCcccccccccc
Q 018318 63 MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS 142 (358)
Q Consensus 63 ~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~ 142 (358)
+.++|| +.+....|| +.++++.|.+. .+++++|+.|+..++.+++++||+|++..+.|+++.... .
T Consensus 75 ~~y~R~--~~Pt~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~--~- 140 (427)
T PRK07049 75 LVYSRF--NHPNSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLL--A- 140 (427)
T ss_pred ccccCC--CCcCHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHH--H-
Confidence 444444 345566787 78999999775 377899999999999999999999999999887653210 0
Q ss_pred CCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh----cCCcEEEEcCCCCC--CccchHHHHHHHHH------hCC
Q 018318 143 GGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD----FRPKLIICGGSAYP--RDWDYARFRAVADK------CGA 210 (358)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~----~~~~~v~~~~~~~~--~~~~l~~i~~la~~------~g~ 210 (358)
..+...|+ +++.+. + ..|++++++++++ .++++|++++++|| ...|+++|.++|+. +++
T Consensus 141 --~~l~~~Gi--~~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~ 211 (427)
T PRK07049 141 --KTFRNFGV--GAVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRP 211 (427)
T ss_pred --HHHHhcCc--EEEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCC
Confidence 00122343 333332 1 3677888877742 36899999988887 46789999999988 899
Q ss_pred EEEEechhhhhhhhccccCCCCC-cccEEEecCCccCCC---CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCC
Q 018318 211 LLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRG---PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS 286 (358)
Q Consensus 211 ~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g---~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (358)
++++|++.+ +... ..++. ++|+++.|++|+++| .++|+++.++ ++.+.+.......
T Consensus 212 ~vvvDety~-~~~~----~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~---------------~l~~~l~~~~~~~ 271 (427)
T PRK07049 212 IIACDNTLL-GPVF----QKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK---------------ALIRQVRALRSAI 271 (427)
T ss_pred EEEEECCcc-cccc----CCccccCCCEEEEcCceeecCCCCcEEEEEECCH---------------HHHHHHHHHHHhc
Confidence 999999833 3221 23445 789999999999874 4679988766 3444444322211
Q ss_pred CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-Cc
Q 018318 287 LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GY 334 (358)
Q Consensus 287 ~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~ 334 (358)
++...+ .. .+.+++.+ +.+..++++..++++.+.++|+++ ++
T Consensus 272 --g~~ls~-~~-a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V 314 (427)
T PRK07049 272 --GTQLDP-HS-CWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKV 314 (427)
T ss_pred --CCCCCH-HH-HHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 111111 11 12223322 246677888899999999999987 55
No 223
>PLN02672 methionine S-methyltransferase
Probab=99.74 E-value=2.4e-16 Score=162.73 Aligned_cols=278 Identities=13% Similarity=0.081 Sum_probs=175.5
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChH-
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP- 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~- 108 (358)
..+.|..+++. +|+.|++++.+.+.. .. + . . +.+ ++.+.+++++++.+|++.+.. ..|++++|+.
T Consensus 698 ~vI~LsinE~d~ppPp~V~eAi~eal~~-~~--~-s---~-g~p---dlr~aLa~~la~~~Gv~~d~~-e~IIvt~Gs~e 765 (1082)
T PLN02672 698 SLIHMDVDESFLPVPSAVKASIFESFVR-QN--I-S---E-SET---DPRPSILQFIKSNYGFPTDSC-TEFVYGDTSLA 765 (1082)
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHhh-cC--C-C---C-CCh---HHHHHHHHHHHHHhCcCCCCC-CEEEEeCCHHH
Confidence 34777777664 488999998876532 11 1 0 0 111 223456689999999875310 1366777875
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCC-CCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
++..++.++++|||.|+++.|.|+.+.. .++..|+.+..+++ +. +++.+|++++++++++.+.++|++
T Consensus 766 lL~lll~aLl~pGD~VLVp~PtY~~Y~~---------~a~~~Ga~vv~Vpl--~~e~gf~lD~d~Le~al~~~~~~~I~L 834 (1082)
T PLN02672 766 LFNKLVLCCVQEGGTLCFPAGSNGTYVS---------AAKFLKANFRRIPT--KSSDGFKLTAKTLASTLETVKKPWVYI 834 (1082)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHH---------HHHHcCCEEEEEec--ccccCCCCCHHHHHHHhccCCCCEEEE
Confidence 6767888999999999999998876542 23456765544444 32 357899999999986433456666
Q ss_pred cCCC-CCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCC-------Cc-----ccEEEecCCccC-
Q 018318 188 GGSA-YPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPF-------EY-----CHIVTTTTHKSL- 246 (358)
Q Consensus 188 ~~~~-~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~-------~~-----~d~~~~s~~K~l- 246 (358)
++|+ ||+ . ..+++|.++|++||++||+|++++ ++.+.+... .++ +. .-+++.|++|.+
T Consensus 835 ~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYs-dL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 835 SGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFS-GLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred ECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCC-ccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 7675 773 2 357899999999999999999953 444322110 011 11 125678999864
Q ss_pred -CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhc--c----HHHHHHHHHHH
Q 018318 247 -RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS--T----PAFKAYAKQVK 319 (358)
Q Consensus 247 -~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~--~----~~~~~~~~~~~ 319 (358)
+|.|.||++++++ ++.+.+.... ... .+......+..+++.... . ....+.++.+.
T Consensus 914 lpGLRIGylIap~~--------------eLi~~l~~~~--~~s-~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk 976 (1082)
T PLN02672 914 SGGHEFGFLALNDS--------------VLIDAFHSAP--GLS-RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILK 976 (1082)
T ss_pred cHHHHheeEEeCCH--------------HHHHHHHHhh--hhc-CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHH
Confidence 6778899999763 3555554321 111 111111112222222111 1 12345566788
Q ss_pred HHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 320 ANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 320 ~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
++++++.+.|++.|+++.. +..++.+|++++
T Consensus 977 ~rRd~L~e~L~~~Gi~v~~-PeGGFfLwl~l~ 1007 (1082)
T PLN02672 977 SRAERLKETLEACGWDVLE-PQGGISMVAKPS 1007 (1082)
T ss_pred HHHHHHHHHHHHCCCeEec-CCcEEEEEEEcc
Confidence 9999999999999998765 678999999874
No 224
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.74 E-value=1.3e-15 Score=146.50 Aligned_cols=288 Identities=14% Similarity=0.069 Sum_probs=160.2
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCC----CCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC--CCCCCCCccccc
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKY----SEGMPGNRYYGGNEFIDEIENLCRSRALQTFH--LDPTQWGVNVQP 103 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~----~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g--~~~~~~~~~v~~ 103 (358)
+.+.+..++.. +++.+.+++.+.+.... ..+|.. .....+|.+.+.+++.+..| ++++ .|+.
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~LR~aia~~~~~~~g~~~~~~----~I~i 104 (409)
T PRK07590 35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGP------EQGYDFLREKIAENDYQARGCDISAD----EIFI 104 (409)
T ss_pred ceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCC------CCCCHHHHHHHHHHHHHhcCCcCChh----hEEE
Confidence 35666666543 47888888877664311 112321 12223454444455544444 4443 3666
Q ss_pred cCChH-HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccce---------eEEeecccCCC-CCCCCHHH
Q 018318 104 YSGSP-ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY---------FESLPYKVNSS-TGYIDYDK 172 (358)
Q Consensus 104 ~sGt~-a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~~~~~~~~~~~-~~~id~~~ 172 (358)
++|+. ++..+ ..++.|||+|++..|.|..+.. .++..|.. .++++++.+.+ ++.+|++
T Consensus 105 t~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~---------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~- 173 (409)
T PRK07590 105 SDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVD---------TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP- 173 (409)
T ss_pred CCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHH---------HHHHcCCcccccccccccceeEeecccccCCcccCc-
Confidence 77764 76654 4567899999999998876542 22334432 11444554422 2344432
Q ss_pred HHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---Cc---ccEEEec
Q 018318 173 LEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY---CHIVTTT 241 (358)
Q Consensus 173 l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~~---~d~~~~s 241 (358)
+.++++|++++|+||+ .. .+++|.++|++||+++|+|+++. .+.+.+..+.++ ++ .-+++.|
T Consensus 174 ------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~-~~~~~~~~~~~~~~~~~~~~~vi~~~S 246 (409)
T PRK07590 174 ------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE-AFISDPSLPHSIYEIEGARECAIEFRS 246 (409)
T ss_pred ------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccch-hhccCCCCCcchhhCCCcccceEEEec
Confidence 2478999888888873 33 47788999999999999999954 444332211122 22 2367889
Q ss_pred CCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHH
Q 018318 242 THKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVK 319 (358)
Q Consensus 242 ~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~ 319 (358)
++|.+ +|.|.|++++++++.+....+... ............. ..+.+.....++..++..-....+++..+++.
T Consensus 247 fSK~~~~pGlRiG~~i~~~~li~~~~~~~~~---~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~ 322 (409)
T PRK07590 247 FSKTAGFTGTRCAYTVVPKELKGKTSDGEGV---SLNSLWNRRQSTK-FNGVSYIVQRAAEAVYSPEGKAQIKELIDYYM 322 (409)
T ss_pred CccccCCcCceeEEEEcCHHHhhhccccchh---hhHHHHHHHHhhc-ccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 99986 677889999987421000000000 0000111111111 11122222222233332111122355677788
Q ss_pred HHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 320 ANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 320 ~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
++++++.+.|++.|+++.. +..++.+|+++..
T Consensus 323 ~~r~~l~~~L~~~~~~~~~-~~g~~f~wi~~~~ 354 (409)
T PRK07590 323 ENAKIIREGLESAGFEVYG-GVNAPYIWVKTPD 354 (409)
T ss_pred HHHHHHHHHHHhcCCceec-CCcceEEEEECCC
Confidence 8899999999999988764 4567789999753
No 225
>PLN02452 phosphoserine transaminase
Probab=99.74 E-value=9.7e-17 Score=150.52 Aligned_cols=273 Identities=16% Similarity=0.088 Sum_probs=172.4
Q ss_pred cceeEeccCCCCCHHHHHHHhcccccCCCCC--CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHH
Q 018318 32 RGIELIASENFTSFAVIEALGSALTNKYSEG--MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA 109 (358)
Q Consensus 32 ~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g--~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a 109 (358)
+.+.+.|++..+|++|++++...+.+-.+.| ...-.++ ..++.+.+ +++++.|+++++++.+ ..+.+...+||.+
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHR-s~~f~~i~-~~~~~~L~~l~~~p~~-y~v~~l~Gsgt~~ 83 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHR-GKEFLSII-QKAEADLRELLDIPDN-YEVLFLQGGASTQ 83 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCC-chHHHHHH-HHHHHHHHHHhCCCCC-ceEEEEeCccHHH
Confidence 4578899999999999999988765422222 2222222 34555555 5788999999998542 2134444677889
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
+.+++.+++.+||++++.. .|.++..+. ..++..|....+...+.......+|+++++. ...++.|.+++
T Consensus 84 ~ea~~~nl~~~~~~~l~~~---~G~fg~r~~----~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~h 153 (365)
T PLN02452 84 FAAIPLNLCKPGDKADFVV---TGSWSKKAA----KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICA 153 (365)
T ss_pred HHHHHHhcCCCCCeEEEEE---CCHHHHHHH----HHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECC
Confidence 9999999999999998876 344432211 1122334311111111110012467666522 12467777665
Q ss_pred CC--CCC-ccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeCCCCC-CC
Q 018318 190 SA--YPR-DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PK 264 (358)
Q Consensus 190 ~~--~~~-~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~ 264 (358)
.+ +|. ..|++++. ++++++|++++.|.. +.+++..++.++|.||++ ||.| |+++.+++..+ ..
T Consensus 154 nETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~-----pidv~~~~v~~~saqK~l-GP~Gl~~v~vr~~~l~~~~ 221 (365)
T PLN02452 154 NETIHGVEFKDYPDVG------NVPLVADMSSNFLSK-----PVDVSKYGVIYAGAQKNV-GPSGVTIVIIRKDLIGNAR 221 (365)
T ss_pred CCCCCcEecCcccccC------CCeEEEECCccccCc-----ccCHHHcCEEEEeccccc-CCCCeEEEEEcHHHHhhcc
Confidence 54 455 36777764 389999999887753 234444455557999988 6998 89988876432 22
Q ss_pred CCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHhhC-Cc
Q 018318 265 KGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGK-GY 334 (358)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-G~ 334 (358)
+..+.+. ++....+.. .+.++|+.+.+.++..+++.+.++ +++.+.++.++++++++++|++. ||
T Consensus 222 ~~~~~~~--~~~~~~~~~---s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~ 288 (365)
T PLN02452 222 PITPGML--DYKIHAEND---SLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGF 288 (365)
T ss_pred cCCCchh--hHHHHHhcC---CccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 1111111 222111211 223578889999999999988765 68999999999999999999985 77
No 226
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.74 E-value=1.8e-16 Score=149.87 Aligned_cols=261 Identities=18% Similarity=0.100 Sum_probs=161.2
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccc-cCCh-
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQP-YSGS- 107 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~-~sGt- 107 (358)
+.+.|..++++ ++|.+.+++.+.+... .+|+.. ...++ ++.+++++|++++ .+++ ++|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~y~~~-------~~~~l----r~~ia~~~~~~~~----~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKI--HRYPEP-------DAPEL----REALSKYTGVPVE----NIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhh--cCCCCC-------CHHHH----HHHHHHHhCCCHH----HEEEeCCCHH
Confidence 44666666553 4788888887665422 123321 11344 4778899998774 2444 6776
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 108 ~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
+++..++.++++|||+|+++.|.|..+. ..++..|.. ++.++.+ .++.+|++++++.+.. ++++|++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~---------~~~~~~g~~--~~~~~~~-~~~~~~~~~l~~~~~~-~~~~v~~ 164 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYE---------ISAKAHGAK--PVYAKRE-EDFSLDVDSVLNAITE-KTKVIFL 164 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHH---------HHHHHcCCE--EEEeecC-CCCCcCHHHHHHHhcc-CCCEEEE
Confidence 4777888888899999999998765432 122345654 3444433 3568999999998864 6888888
Q ss_pred cCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCc--ccEEEecCCccCC--CCCeeEEEEeCCCC
Q 018318 188 GGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEY--CHIVTTTTHKSLR--GPRAGMIFYRKGPK 261 (358)
Q Consensus 188 ~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~--~d~~~~s~~K~l~--g~~gG~i~~~~~~~ 261 (358)
++++|| ...|++++.++|+++|+++++|++|. ++.. ......... .-+++.|++|.++ |.+.|++++++
T Consensus 165 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~-~~~~-~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--- 239 (361)
T PRK00950 165 CTPNNPTGNLIPEEDIRKILESTDALVFVDEAYV-EFAE-YDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--- 239 (361)
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchh-hhCc-cchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH---
Confidence 777765 57799999999999999999999974 3321 111100112 2367789999874 55679998876
Q ss_pred CCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCceeeeCC
Q 018318 262 PPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (358)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~ 340 (358)
++.+.+.....+.. .+.... .++...+...+ +++..++.+++++++.+.|. +++. +
T Consensus 240 ------------~~~~~~~~~~~~~~---~~~~~~---~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~---~~~~--~ 296 (361)
T PRK00950 240 ------------WLIDYYMRAKTPFS---LTRLSQ---AAAIAALSDKEYIEKSIEHGIKSREYLYNELP---FKVY--P 296 (361)
T ss_pred ------------HHHHHHHHhcCCCC---CCHHHH---HHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC---eeEC--C
Confidence 34444443322211 122222 22222222223 34555566666666666664 5554 3
Q ss_pred CcceEEEEEc
Q 018318 341 TENHLVLWDL 350 (358)
Q Consensus 341 ~~~~~~~v~~ 350 (358)
..+..+|+++
T Consensus 297 ~~~~~i~~~~ 306 (361)
T PRK00950 297 SEANFVLVDV 306 (361)
T ss_pred CcceEEEEEC
Confidence 4567788887
No 227
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.74 E-value=4.6e-16 Score=150.54 Aligned_cols=218 Identities=13% Similarity=0.077 Sum_probs=142.7
Q ss_pred ccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh
Q 018318 101 VQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD 179 (358)
Q Consensus 101 v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~ 179 (358)
|+.++| ++|+..++.++++|||.|++..|.|..+.. .++..|+.+ +.++.++ + .+|++++++++++
T Consensus 144 Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~---------~~~~~g~~~--~~v~~~~-~-g~~~~~l~~~~~~ 210 (431)
T PRK15481 144 IDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN---------MLRYAGFSA--SPVSVDA-E-GMQPEKLERALAQ 210 (431)
T ss_pred EEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH---------HHHHcCCeE--EeeccCC-C-CCCHHHHHHHHhc
Confidence 555666 569999999999999999999998876531 234566544 4444442 2 4899999999865
Q ss_pred cCCcEEEEc-CCCCC--Cccch---HHHHHHHHHh-CCEEEEechhhhhhhhccccCCCCC---cccEEEecCCccC-CC
Q 018318 180 FRPKLIICG-GSAYP--RDWDY---ARFRAVADKC-GALLLCDMAHISGLVAAQEAANPFE---YCHIVTTTTHKSL-RG 248 (358)
Q Consensus 180 ~~~~~v~~~-~~~~~--~~~~l---~~i~~la~~~-g~~lvvD~a~~~g~~~~~~~~~~~~---~~d~~~~s~~K~l-~g 248 (358)
++++++++ +++|| ...+. ++|.++|++| ++++|+|+++. .+.+.+ ....+. .--+++.|++|.+ +|
T Consensus 211 -~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~-~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~G 287 (431)
T PRK15481 211 -GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFA-LLSSSP-YHSVIPQTTQRWALIRSVSKALGPD 287 (431)
T ss_pred -CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchh-hhccCC-CCCCCcCCCCCEEEEeeeccccCCC
Confidence 78888776 78887 34454 5999999999 99999999843 443322 111222 2237889999987 45
Q ss_pred CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHH
Q 018318 249 PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS-TPAFKAYAKQVKANAVALGN 327 (358)
Q Consensus 249 ~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~-~~~~~~~~~~~~~~~~~l~~ 327 (358)
.|.||+++++ ++.+.+......... ..+.....++..++..-. ...+...++.+.++++++.+
T Consensus 288 lRiG~~i~~~---------------~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~ 351 (431)
T PRK15481 288 LRLAFVASDS---------------ATSARLRLRLNSGTQ-WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLAR 351 (431)
T ss_pred ceeEEEeCCH---------------HHHHHHHHHHhcccc-CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHH
Confidence 6779999877 344444432222111 122222233333332210 01134567778888999999
Q ss_pred HHhhCCceeeeCCCcceEEEEEcC
Q 018318 328 YLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 328 ~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
.|++.|+++.. +..+..+|+++.
T Consensus 352 ~L~~~~~~~~~-p~gg~f~~~~l~ 374 (431)
T PRK15481 352 ALQQYGIAIPS-PGDGLNLWLPLD 374 (431)
T ss_pred HHHHcCCcccc-CCCeEEEEEECC
Confidence 99998887643 567888999975
No 228
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.74 E-value=2.3e-16 Score=149.17 Aligned_cols=240 Identities=17% Similarity=0.208 Sum_probs=153.7
Q ss_pred HHHHHHHHHHHHHHhcC------CCCCCCCccccccCChH-HHHHHHHhh-cCCCCeEEEecCCCCccccccccccCCcc
Q 018318 75 IDEIENLCRSRALQTFH------LDPTQWGVNVQPYSGSP-ANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKK 146 (358)
Q Consensus 75 ~~~le~~~~~~la~~~g------~~~~~~~~~v~~~sGt~-a~~~~l~a~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~ 146 (358)
...++ +.++++++ .+.+ ..+++++|+. ++..++..+ .++||.|+++.|.|.++.. .
T Consensus 46 ~~~lr----~~ia~~~~~~~~~~~~~~---~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~---------~ 109 (363)
T PF00155_consen 46 YPELR----EAIADFLGRRYGVPVDPE---ANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIE---------A 109 (363)
T ss_dssp HHHHH----HHHHHHHHHHHTHHTTGG---EGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHH---------H
T ss_pred hHHHH----HHHHHHhhhccCcccccc---eEEEEecccccchhhhhhcccccccccceecCCccccccc---------c
Confidence 44565 55556665 3332 2477788876 555556666 6799999999998876542 2
Q ss_pred cccccceeEEeecccCCCCCCCCHHHHHHHHhhc-----CCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEec
Q 018318 147 ISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~-----~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~ 216 (358)
++..|..+..++++.. .++.+|++++++.+++. ++++|+++.++||+ .. .+++|+++|++||+++++|+
T Consensus 110 ~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De 188 (363)
T PF00155_consen 110 ARLLGAEVIPVPLDSE-NDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDE 188 (363)
T ss_dssp HHHTTSEEEEEEEEET-TTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEE
T ss_pred ccccCceeeecccccc-ccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeee
Confidence 3456665444443322 46799999999999864 45788888887763 33 45666777999999999999
Q ss_pred hhhhhhhhccc-c---CCCCC-ccc-EEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCc
Q 018318 217 AHISGLVAAQE-A---ANPFE-YCH-IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQ 288 (358)
Q Consensus 217 a~~~g~~~~~~-~---~~~~~-~~d-~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (358)
+|... ..... . ...++ +.+ +++.|++|.+ .|.+.|++++++ ++.+.+......+..
T Consensus 189 ~y~~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~---------------~~~~~l~~~~~~~~~ 252 (363)
T PF00155_consen 189 AYSDL-IFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP---------------ELIERLRRFQRSGLS 252 (363)
T ss_dssp TTTTG-BSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH---------------HHHHHHHHHHHHTTS
T ss_pred ceecc-ccCCCccCcccccccccccceeeeeccccccccccccccccchh---------------hhhhhhhhccccccc
Confidence 97543 33211 0 01112 333 8899999986 345569999966 455555543322211
Q ss_pred CCCChhHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 289 GGPHNHQIGALAVALKQAST--PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 289 ~~~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
+......+..++..... +...+.+++++++++++.+.|.+.|+.+..+ ..++.+|+...
T Consensus 253 ---~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~ 313 (363)
T PF00155_consen 253 ---SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPP-EAGFFLWVRLD 313 (363)
T ss_dssp ---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHH-SBSSEEEEEES
T ss_pred ---cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeec-cCccEEEEEcc
Confidence 22222222233332211 1447788889999999999999999998863 47777888765
No 229
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.73 E-value=4.7e-16 Score=160.74 Aligned_cols=251 Identities=17% Similarity=0.186 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh----cCCCC----eEEEecCCCCccccccccccCCcc
Q 018318 75 IDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV----LEPHD----RIMGLDLPSGGHLTHGYYTSGGKK 146 (358)
Q Consensus 75 ~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~----~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~ 146 (358)
..+++.+..+++++++|.+. +.+...+|+.|+.+++.++ .++|| +|+++...|++++. .
T Consensus 540 ~l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~---------s 606 (954)
T PRK05367 540 YRELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA---------S 606 (954)
T ss_pred HHHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH---------H
Confidence 44555667799999999985 3455555666775555444 35666 58888887776542 2
Q ss_pred cccccceeEEeecccCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCCC-CC-ccchHHHHHHHHHhCCEEEEechhhhhh
Q 018318 147 ISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICGGSAY-PR-DWDYARFRAVADKCGALLLCDMAHISGL 222 (358)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~--~~~~v~~~~~~~-~~-~~~l~~i~~la~~~g~~lvvD~a~~~g~ 222 (358)
+...|.+ ++.++.+ .++.+|+++|+++++++ ++.+|++..+++ +. ..|+++|+++||++|+++++|+||..++
T Consensus 607 a~~~G~~--vv~v~~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al 683 (954)
T PRK05367 607 AVMAGMK--VVVVACD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQ 683 (954)
T ss_pred HHHCCCE--EEEECCC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhc
Confidence 3456654 4444544 36899999999999764 344555555543 43 4689999999999999999999997665
Q ss_pred hhccccCCCCC-cccEEEecCCccCCCCC-----e-eEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCCh-h
Q 018318 223 VAAQEAANPFE-YCHIVTTTTHKSLRGPR-----A-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHN-H 294 (358)
Q Consensus 223 ~~~~~~~~~~~-~~d~~~~s~~K~l~g~~-----g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 294 (358)
+. +..+.+ ++|++++++||||++|. | |++++++.+.+.-++..... ...... .+...+... .
T Consensus 684 ~~---l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~-----~~~~~~--~g~v~ta~~g~ 753 (954)
T PRK05367 684 VG---LARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQI-----AGGETG--IGAVSAAPFGS 753 (954)
T ss_pred cC---CCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCc-----CCCCCC--cCcchhHHHHH
Confidence 43 112334 89999999999985443 2 68888764322111110000 000000 011010011 1
Q ss_pred -HHHH-HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee-C--CCcceEEEEEcCC
Q 018318 295 -QIGA-LAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT-G--GTENHLVLWDLRP 352 (358)
Q Consensus 295 -~~~a-l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~-~--~~~~~~~~v~~~~ 352 (358)
.++- .+.-+..+..+++.+..++...+++|+++.|.+ ++++.- + ...-|-+.+|+.+
T Consensus 754 al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~ 815 (954)
T PRK05367 754 ASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRP 815 (954)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeec
Confidence 1111 122233344456778888888999999999987 344422 1 1234557777754
No 230
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.73 E-value=1.2e-15 Score=145.93 Aligned_cols=279 Identities=18% Similarity=0.103 Sum_probs=161.2
Q ss_pred eeEeccCC--CCCHHHHHHHhcccccCCC--CCCCCCCCCCCchhHHHHHHHHHHHHHHhcC--CCCCCCCccccccCC-
Q 018318 34 IELIASEN--FTSFAVIEALGSALTNKYS--EGMPGNRYYGGNEFIDEIENLCRSRALQTFH--LDPTQWGVNVQPYSG- 106 (358)
Q Consensus 34 ~~l~a~~~--~~~~~V~~a~~~~~~~~~~--~g~~~~~~~~~~~~~~~le~~~~~~la~~~g--~~~~~~~~~v~~~sG- 106 (358)
+.+..+.. .+++.+.+++.+.+..... ..|. .......+.+.+.+++.+.++ ++++ .|++++|
T Consensus 36 ~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~ 105 (394)
T PRK06836 36 FDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYM------PNAGYPEVREAIAESLNRRFGTPLTAD----HIVMTCGA 105 (394)
T ss_pred EEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCC------CCCCCHHHHHHHHHHHHHHhCCCCCcC----cEEEeCCh
Confidence 55554432 3468899888766543211 1121 112233444444455554433 3443 2444555
Q ss_pred hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEE
Q 018318 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186 (358)
Q Consensus 107 t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~ 186 (358)
++++..++.+++++||.|++..|.|..+.. .++..|+ ++++++.+++++.+|++++++++++ ++++|+
T Consensus 106 ~~al~~~~~~l~~~gd~Vli~~p~~~~~~~---------~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~~~~-~~~~v~ 173 (394)
T PRK06836 106 AGALNVALKAILNPGDEVIVFAPYFVEYRF---------YVDNHGG--KLVVVPTDTDTFQPDLDALEAAITP-KTKAVI 173 (394)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHH---------HHHHcCC--EEEEEecCCccCcCCHHHHHhhcCc-CceEEE
Confidence 579999999999999999999987765431 2234555 4445555544578999999999965 789988
Q ss_pred EcCCCCC--Ccc---chHHHHHHHHH------hCCEEEEechhhhhhhhccccCCC-CC--cccEEEecCCccCC--CCC
Q 018318 187 CGGSAYP--RDW---DYARFRAVADK------CGALLLCDMAHISGLVAAQEAANP-FE--YCHIVTTTTHKSLR--GPR 250 (358)
Q Consensus 187 ~~~~~~~--~~~---~l~~i~~la~~------~g~~lvvD~a~~~g~~~~~~~~~~-~~--~~d~~~~s~~K~l~--g~~ 250 (358)
+++++|| ... .+++|.++|++ ||+++|+|+++ ..+...+..... .. ...+++.|++|.|+ |.+
T Consensus 174 ~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlR 252 (394)
T PRK06836 174 INSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPY-REIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGER 252 (394)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-cccccCCCCCCChHHccCcEEEEecchhhccCccee
Confidence 8877776 333 47788888998 89999999984 344432211111 12 33588899999874 667
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (358)
.|+++++++..+ . ..+...+............+.....+ +..+.... ...+++.++++.+.+.|+
T Consensus 253 iG~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~q~~----~~~~l~~~--~~~~~~~~~r~~l~~~L~ 317 (394)
T PRK06836 253 IGYIAVNPEMED-------A--DDLVAALVFANRILGFVNAPALMQRV----VAKCLDAT--VDVSIYKRNRDLLYDGLT 317 (394)
T ss_pred eEEEecCHHHhh-------h--HHHHHHHHHHhhccccccCCHHHHHH----HHHHhCCh--HHHHHHHHHHHHHHHHHH
Confidence 799998764100 0 00111111100000000111111111 12222222 124456677888999999
Q ss_pred hCCceeeeCCCcceEEEEEcC
Q 018318 331 GKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 331 ~~G~~~~~~~~~~~~~~v~~~ 351 (358)
+.|+++.. +..++.+|+.+.
T Consensus 318 ~~g~~~~~-~~gg~~~~~~~~ 337 (394)
T PRK06836 318 ELGFECVK-PQGAFYLFPKSP 337 (394)
T ss_pred hCCCEeec-CCceEEEEEeCC
Confidence 88988764 456777888753
No 231
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.73 E-value=6.2e-16 Score=144.59 Aligned_cols=275 Identities=15% Similarity=0.125 Sum_probs=179.7
Q ss_pred eeEeccC-C-CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHH
Q 018318 34 IELIASE-N-FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (358)
Q Consensus 34 ~~l~a~~-~-~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~ 111 (358)
|.|..+. + .++++.++||.. |...|.+++.+.+|| +.++++||.+. .+.+.+|..+..
T Consensus 44 IDLrSDTgT~apS~~m~aAM~~-----------GDD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~ 103 (467)
T TIGR02617 44 IDLLTDSGTGAVTQSMQAAMMR-----------GDEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQ 103 (467)
T ss_pred EECccCCCCCCCCHHHHHHHHc-----------CCcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHH
Confidence 4444433 2 368888888864 112244566677888 77889999986 377789999999
Q ss_pred HHHHhhcC-CCCeEEEecC----CCCccccccccccCCcccccccceeEEeec------ccC-CCCCCCCHHHHHHHHhh
Q 018318 112 AAYTAVLE-PHDRIMGLDL----PSGGHLTHGYYTSGGKKISATSIYFESLPY------KVN-SSTGYIDYDKLEEKALD 179 (358)
Q Consensus 112 ~~l~a~~~-~gd~Vl~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~-~~~~~id~~~l~~~l~~ 179 (358)
.++..+++ |||++.+... .|..|+... . ..+.+.|+....+.. .++ +..|.+|+++++++|++
T Consensus 104 Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett----~-g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~ 178 (467)
T TIGR02617 104 IYIPVLIKKREQEKGLDRSKMVAFSNYFFDTT----Q-GHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEE 178 (467)
T ss_pred HHHHhhcccccccccccccccccceEEEEecc----h-HHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhh
Confidence 99999988 7888885443 344443211 0 122345543332211 111 12578999999999986
Q ss_pred cC---CcEE---EEcCCCCCCccc---hHHHHHHHHHhCCEEEEechhhhh-hh--------hccccCC-----CCCccc
Q 018318 180 FR---PKLI---ICGGSAYPRDWD---YARFRAVADKCGALLLCDMAHISG-LV--------AAQEAAN-----PFEYCH 236 (358)
Q Consensus 180 ~~---~~~v---~~~~~~~~~~~~---l~~i~~la~~~g~~lvvD~a~~~g-~~--------~~~~~~~-----~~~~~d 236 (358)
+. ...+ +++++..|.+.+ ++++.++|++||+.++.|+|...- .. +.+.-.. .++.+|
T Consensus 179 ~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD 258 (467)
T TIGR02617 179 VGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD 258 (467)
T ss_pred cCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC
Confidence 32 2222 233344455554 678899999999999999986542 21 1111000 124789
Q ss_pred EEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHH---HHhhhhc--C--CCCcCCCChhHHHHHHHHHHHhccH
Q 018318 237 IVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFE---DKINFAV--F--PSLQGGPHNHQIGALAVALKQASTP 309 (358)
Q Consensus 237 ~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~--~~~~~~~~~~~~~al~~al~~~~~~ 309 (358)
.+++|++|.++.|-||+++++++ ++. +..+... + ..+.|+.....+.+++..|.+..+
T Consensus 259 svt~slsKglgApvGg~Lag~d~--------------~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~- 323 (467)
T TIGR02617 259 MLAMSAKKDAMVPMGGLLCFKDD--------------SFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN- 323 (467)
T ss_pred EEEEEcCCCCCCcccceEEecch--------------hHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhccc-
Confidence 99999999998888999999885 232 2222211 0 112355666777788888877654
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 310 AFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 310 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
.+++++.....+||.+.|.+.|+++.. ..+|-+.||...
T Consensus 324 --~~yl~~ri~qv~yl~~~L~~~Gvpi~~--~Gghav~iDa~~ 362 (467)
T TIGR02617 324 --LDWLAYRINQVQYLVNGLEEIGVVCQQ--AGGHAAFVDAGK 362 (467)
T ss_pred --HHHHHHHHHHHHHHHHHHHhCCCcEEe--cCccEEEEehhh
Confidence 356666677799999999999999975 789999999864
No 232
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.73 E-value=1.1e-16 Score=134.05 Aligned_cols=163 Identities=24% Similarity=0.243 Sum_probs=112.0
Q ss_pred HHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 161 (358)
++++++++++.+.+. .+++++|+.|+..++.++.++|++|++..+.|.++.. . .....|.. +..++.
T Consensus 5 ~~~~l~~~~~~~~~~---~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~-------~~~~~g~~--~~~v~~ 71 (170)
T cd01494 5 LEEKLARLLQPGNDK---AVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW-V-------AAELAGAK--PVPVPV 71 (170)
T ss_pred HHHHHHHHcCCCCCc---EEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh-h-------HHHhcCCE--EEEecc
Confidence 448899999643321 3556688899999999998889999999988876541 0 12344554 344443
Q ss_pred CCCC-CCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEE
Q 018318 162 NSST-GYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIV 238 (358)
Q Consensus 162 ~~~~-~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~ 238 (358)
+..+ ...|.+.+++.....+++++++++++++ ...|+++|.++|+++|+++++|++|..+............++|++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~ 151 (170)
T cd01494 72 DDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVV 151 (170)
T ss_pred CCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEE
Confidence 3211 1233335655554457888888776544 456889999999999999999999876654322111111279999
Q ss_pred EecCCccCCCCCeeEEEEe
Q 018318 239 TTTTHKSLRGPRAGMIFYR 257 (358)
Q Consensus 239 ~~s~~K~l~g~~gG~i~~~ 257 (358)
+.|+||+|+++++|+++++
T Consensus 152 ~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 152 TFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEEcccccCCCceEEEEeC
Confidence 9999999988777998764
No 233
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.72 E-value=1.1e-15 Score=147.76 Aligned_cols=286 Identities=15% Similarity=0.105 Sum_probs=168.8
Q ss_pred ceeEeccCCCC-CHHHHHHHhcccccC-----CCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC----CCCCCCCcccc
Q 018318 33 GIELIASENFT-SFAVIEALGSALTNK-----YSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH----LDPTQWGVNVQ 102 (358)
Q Consensus 33 ~~~l~a~~~~~-~~~V~~a~~~~~~~~-----~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g----~~~~~~~~~v~ 102 (358)
.|.|-.++|.+ .+.+.+.+.+..... .........+|........|.+.+.+.+.+.+| ++++ .|+
T Consensus 49 ~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~----~Iv 124 (447)
T PLN02607 49 VIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD----RIV 124 (447)
T ss_pred eEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH----HeE
Confidence 47777777766 555666655432200 000000001122222233555555667776666 3443 355
Q ss_pred ccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccc-cccceeEEeecccCCC-CCCCCHHHHHHHHhh
Q 018318 103 PYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS-ATSIYFESLPYKVNSS-TGYIDYDKLEEKALD 179 (358)
Q Consensus 103 ~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~ 179 (358)
.++| ++|+.+++.+++.|||.|+++.|.|+++.. .+. ..|+ ++++++.+.. ++.+|++++++++++
T Consensus 125 it~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~---------~~~~~~g~--~vv~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 125 LTAGATAANELLTFILADPGDALLVPTPYYPGFDR---------DLRWRTGV--KIVPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcCCc--EEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence 5666 568998888899999999999998876531 122 2454 4455554422 357999999998864
Q ss_pred -----cCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhcc-ccCCC------CC--c-cc--E
Q 018318 180 -----FRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQ-EAANP------FE--Y-CH--I 237 (358)
Q Consensus 180 -----~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~-~~~~~------~~--~-~d--~ 237 (358)
.++|+|++++|+||+ +. .+++|.++|++||+.+|+|++++ ...+.+ .+... .+ + .+ +
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa-~~~f~~~~f~S~~s~~~~~~~~~~~~~v~ 272 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYS-GSVFSASEFVSVAEIVEARGYKGVAERVH 272 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCcccHHHHHhhcCCCCCcCcEE
Confidence 367888888888873 33 47899999999999999999954 333321 11110 00 1 12 5
Q ss_pred EEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHH--hccHHHHH
Q 018318 238 VTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ--ASTPAFKA 313 (358)
Q Consensus 238 ~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~--~~~~~~~~ 313 (358)
++.|++|.| +|.|.|++++.++ ++...+....... ..+......+...+.. ..+..+..
T Consensus 273 vi~s~SK~fg~~GlRvG~ivs~n~--------------~l~~~~~~~~~~~---~~s~~~q~~~~~~L~d~~~~~~~l~~ 335 (447)
T PLN02607 273 IVYSLSKDLGLPGFRVGTIYSYND--------------KVVTTARRMSSFT---LVSSQTQHLLASMLSDEEFTENYIRT 335 (447)
T ss_pred EEEcchhcCCCCcceEEEEEEcCH--------------HHHHHHHHHhhcC---CCCHHHHHHHHHHhCCchhHHHHHHH
Confidence 678999986 5778899998543 3444333321111 1111111111222211 00011234
Q ss_pred HHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 314 YAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 314 ~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
.++++.+.++.+.+.|++.|+++.. +..+..+|++++.
T Consensus 336 ~r~~l~~~~~~~~~~L~~~gi~~~~-~~ag~fvw~~L~~ 373 (447)
T PLN02607 336 NRERLRKRYEMIVQGLRRAGIECLK-GNAGLFCWMNLSP 373 (447)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCccc-CCeeEEEEEEchH
Confidence 4566777888899999999988654 5678889999863
No 234
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.72 E-value=1.8e-15 Score=143.17 Aligned_cols=286 Identities=15% Similarity=0.093 Sum_probs=166.1
Q ss_pred cccccccchHHHHHHHHHHHHh-hcceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 018318 9 NSSLETVDPEIHDLIEKEKRRQ-CRGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSR 85 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~ 85 (358)
+.+++..+...+..++...... ...+.|..++. ..++.+.+++.+.... .+|+.. .| ...+.+.+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~~---~G---~~~lr~~ia~~ 74 (364)
T PRK07865 4 SARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPTT---AG---TPELREAIVGW 74 (364)
T ss_pred cccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCCc---cC---CHHHHHHHHHH
Confidence 3455655555444443332222 24466665532 2367778887654321 133321 12 23444555677
Q ss_pred HHHhcCCC---CCCCCccccccCCh-HHHHHHHHhh-cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 86 ALQTFHLD---PTQWGVNVQPYSGS-PANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 86 la~~~g~~---~~~~~~~v~~~sGt-~a~~~~l~a~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
+.+.+|.+ ++ .|+.++|+ +++..++..+ +++||.|++..|.|.++.. .+...|++ ++.++
T Consensus 75 l~~~~~~~~~~~~----~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~---------~~~~~g~~--~~~~~ 139 (364)
T PRK07865 75 LARRRGVTGLDPA----AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV---------GARLAGAT--VVRAD 139 (364)
T ss_pred HHHHcCCCCCCcc----cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH---------HHHhcCCE--EEecC
Confidence 77766643 43 35567775 5887777777 7999999999998875431 22345543 33332
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--
Q 018318 161 VNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-- 233 (358)
Q Consensus 161 ~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-- 233 (358)
++++++ +.++++|++++++||+ . ..+++|.++|++||+++|+|+++. .+.+.+.....+.
T Consensus 140 --------~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~ 206 (364)
T PRK07865 140 --------SLTELG----PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-ELGWDAEPVSILDPR 206 (364)
T ss_pred --------ChhhCC----cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-hhccCCCCCcccccc
Confidence 122222 2467888888788773 3 346789999999999999999965 3333221111111
Q ss_pred ------cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHH
Q 018318 234 ------YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 305 (358)
Q Consensus 234 ------~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~ 305 (358)
.-.+++.|++|.+ +|.+.|++++++ ++.+.+.......... .+.....++..++..
T Consensus 207 ~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~---------------~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~ 270 (364)
T PRK07865 207 VCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP---------------ALVAELLEVRKHAGMM-VPAPVQAAMVAALGD 270 (364)
T ss_pred ccCCccceEEEEeechhccCCCceeeEEEecCH---------------HHHHHHHHHHHhcCCC-cCHHHHHHHHHHhCC
Confidence 1238899999986 577889998876 3444443321111111 122222222222221
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEc
Q 018318 306 ASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDL 350 (358)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~ 350 (358)
....+..++++.++++.+.+.|++.|+.+.. +..+..+|+.+
T Consensus 271 --~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~ 312 (364)
T PRK07865 271 --DAHVREQRERYARRRAVLRPALEAAGFRVDH-SEAGLYLWATR 312 (364)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHcCCcccC-CCccEEEEEeC
Confidence 1224566677888899999999988988764 44566788875
No 235
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=1.4e-15 Score=144.36 Aligned_cols=274 Identities=12% Similarity=0.026 Sum_probs=159.6
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCC-CCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC----CCCCCCCcccccc
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKY-SEGMPGNRYYGGNEFIDEIENLCRSRALQTFH----LDPTQWGVNVQPY 104 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~-~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g----~~~~~~~~~v~~~ 104 (358)
+.+.|..+++. +|+.+.+++.+.+.... ...|+. .....|.+.+.+++.+.++ ++++ .|+.+
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-------~G~~~Lr~aia~~~~~~~~~~~~v~~~----~I~it 97 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD-------GGHEALKQAIAEYVNESAAGSSQITPA----NISVG 97 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC-------CchHHHHHHHHHHhCccccccCCCCHH----HEEEc
Confidence 35667766654 57899999887554321 122322 1223454333333333321 4543 35567
Q ss_pred CCh-HHHHHHHHhhcCCCC-eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhh---
Q 018318 105 SGS-PANFAAYTAVLEPHD-RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD--- 179 (358)
Q Consensus 105 sGt-~a~~~~l~a~~~~gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~--- 179 (358)
+|+ +++..++.+++.+|| +|++..|.|..+.. .++..|..+ +.++.+.+++.+|++++++++++
T Consensus 98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~---------~~~~~g~~~--~~~~~~~~~~~~d~~~l~~~~~~~~~ 166 (374)
T PRK02610 98 NGSDELIRSLLIATCLGGEGSILVAEPTFSMYGI---------LAQTLGIPV--VRVGRDPETFEIDLAAAQSAIEQTQN 166 (374)
T ss_pred CChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHH---------HHHHcCCEE--EEecCCcccCCCCHHHHHHHHHhhcC
Confidence 775 588777777777886 89999998765431 234566544 44444434578999999999875
Q ss_pred cCCcEEEEcCCCCC--CccchHHHHHHHHH-hCCEEEEechhhhhhhhccccCCCCCc--ccEEEecCCccC--CCCCee
Q 018318 180 FRPKLIICGGSAYP--RDWDYARFRAVADK-CGALLLCDMAHISGLVAAQEAANPFEY--CHIVTTTTHKSL--RGPRAG 252 (358)
Q Consensus 180 ~~~~~v~~~~~~~~--~~~~l~~i~~la~~-~g~~lvvD~a~~~g~~~~~~~~~~~~~--~d~~~~s~~K~l--~g~~gG 252 (358)
+++++|++++++|| ...+.+++.++++- +++++|+|+++. .+..... ...+.. --+++.|++|++ +|.|.|
T Consensus 167 ~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~-~~~~~~~-~~~~~~~~~~ivi~SfSK~~g~~GlRiG 244 (374)
T PRK02610 167 PPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYF-EFSQTTL-VGELAQHPNWVILRTFSKAFRLAAHRVG 244 (374)
T ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEecccc-ccCccch-HHHHhcCCCEEEEEecchhccCccccee
Confidence 57899988888887 34454444444321 489999999953 3321110 011111 137789999986 678889
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++++++ ++.+.+.....+. + .+.....+...++... +.+.+.+++..+.++.+.+.|+..
T Consensus 245 ~~v~~~---------------~l~~~l~~~~~~~--~-~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 304 (374)
T PRK02610 245 YAIGHP---------------ELIAVLEKVRLPY--N-LPSFSQLAAQLALEHR--QELLAAIPEILQERDRLYQALQEL 304 (374)
T ss_pred eeecCH---------------HHHHHHHHhcCCC--C-CCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999876 4555554432221 1 1222222222333211 223333444555677788888776
Q ss_pred -CceeeeCCCcceEEEEEcC
Q 018318 333 -GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 333 -G~~~~~~~~~~~~~~v~~~ 351 (358)
|+.+. ++.+..+|+++.
T Consensus 305 ~~~~~~--p~~g~f~~~~l~ 322 (374)
T PRK02610 305 PQLRVW--PSAANFLYLRLS 322 (374)
T ss_pred CCcEeC--CCcceEEEEeCC
Confidence 67654 345667998874
No 236
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.71 E-value=2.6e-16 Score=148.11 Aligned_cols=232 Identities=16% Similarity=0.132 Sum_probs=144.6
Q ss_pred HHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCC-CeEEEecCCCCccccccccccCCcccccccceeEEeec
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY 159 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (358)
.++++++++|++++ .|++++|+ +++..++.+++++| |+|+++.|+|+.+. ..++..|+.+. .+
T Consensus 62 l~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~---------~~~~~~G~~~~--~v 126 (351)
T PRK01688 62 VIENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS---------VSAETIGVEIR--TV 126 (351)
T ss_pred HHHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH---------HHHHHcCCEEE--Ee
Confidence 34789999999875 36567775 69999999999997 89999988875432 12345665444 44
Q ss_pred ccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHh--CCEEEEechhhhhhhhccccCCCCC-c
Q 018318 160 KVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE-Y 234 (358)
Q Consensus 160 ~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~--g~~lvvD~a~~~g~~~~~~~~~~~~-~ 234 (358)
+.+ +++.+|++++++++ + ++++|++++|+|| ...+.+++.++++.. ++++|+|+++. .+.........+. .
T Consensus 127 ~~~-~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~-~f~~~~s~~~~~~~~ 202 (351)
T PRK01688 127 PTL-DNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYI-EFCPQASLAGWLAEY 202 (351)
T ss_pred ecC-CCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hcCCCCChHHHHhhC
Confidence 444 35789999999987 3 7899999999887 455656555555432 68999999953 3321110000011 1
Q ss_pred -ccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH
Q 018318 235 -CHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF 311 (358)
Q Consensus 235 -~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~ 311 (358)
--+++.|++|++ +|.|.|++++++ ++.+.+.+...++. .+.....+..+++.....+.+
T Consensus 203 ~n~iv~rSfSK~~glaGlRiGy~i~~~---------------~~i~~l~~~~~~~~---v~~~~~~~a~~~L~~~~~~~~ 264 (351)
T PRK01688 203 PHLVILRTLSKAFALAGLRCGFTLANE---------------EVINLLLKVIAPYP---LSTPVADIAAQALSPQGIAAM 264 (351)
T ss_pred CCEEEEecchHhhcCHHHHHhHHhCCH---------------HHHHHHHhccCCCC---CCHHHHHHHHHHHhcchHHHH
Confidence 237889999986 356679998877 35555554332221 111111111222221101224
Q ss_pred HHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 312 KAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 312 ~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
...++++.++++++.+.|++. |++... ++.++.+|+++.
T Consensus 265 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~-ps~~nfi~~~~~ 304 (351)
T PRK01688 265 RERVAEINANRQWLIAALKEIPCVEQVF-DSETNYILARFT 304 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEC-CCCCcEEEEEcC
Confidence 566677788889999999987 664232 345667888764
No 237
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.71 E-value=1.7e-16 Score=157.79 Aligned_cols=235 Identities=17% Similarity=0.114 Sum_probs=156.0
Q ss_pred HHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
+.+.+|++||++.. .+.++|| .+|.+++.++++|||+|++...+|-|.+ ++ .+.+.|+....+...
T Consensus 179 Aq~~AA~~fgAd~t-----yFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~-hg-------aLiLsGa~PVYl~P~ 245 (720)
T PRK13578 179 AQKHAAKVFNADKT-----YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH-HG-------ALIQAGATPVYLETA 245 (720)
T ss_pred HHHHHHHHhCCCce-----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HH-------HHHHcCCeEEEeecc
Confidence 44789999999973 4456775 5999999999999999999999887754 21 134566533322222
Q ss_pred cCCCC---CCCCHHH-----HHHHHhhc--------C-CcEEEEcCCC-CCCccchHHHHHH-HHHhCCEEEEechhhhh
Q 018318 161 VNSST---GYIDYDK-----LEEKALDF--------R-PKLIICGGSA-YPRDWDYARFRAV-ADKCGALLLCDMAHISG 221 (358)
Q Consensus 161 ~~~~~---~~id~~~-----l~~~l~~~--------~-~~~v~~~~~~-~~~~~~l~~i~~l-a~~~g~~lvvD~a~~~g 221 (358)
.+ .. +.++++. ++++|+++ + .+++++..++ .|.+.+++.|.++ |+.++ ++++|+||+..
T Consensus 246 ~n-~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah 323 (720)
T PRK13578 246 RN-PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGY 323 (720)
T ss_pred cc-ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhh
Confidence 21 12 2456544 99999875 2 3667666554 6788899999998 78888 99999999866
Q ss_pred hhhccc---cC-CCCC-ccc----EEEecCCccCCCCC-eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCC
Q 018318 222 LVAAQE---AA-NPFE-YCH----IVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGP 291 (358)
Q Consensus 222 ~~~~~~---~~-~~~~-~~d----~~~~s~~K~l~g~~-gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (358)
+.+.+. ++ ..++ ++| +++.|.||.+++.. ++++..++... +-+.+.++ .++++....-..++||
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i--~g~~~~v~----~~r~~~al~m~qSTSP 397 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHI--KGQARYCP----HKRLNNAFMLHASTSP 397 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCccc--ccccccCC----HHHHHHHHHHHcCCCh
Confidence 544332 22 1234 889 99999999998764 46666654311 00000110 1234433222335678
Q ss_pred ChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-hhC-Cceee
Q 018318 292 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL-TGK-GYSLV 337 (358)
Q Consensus 292 ~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~-G~~~~ 337 (358)
++..+|++-.|...+.........++..+.+..+|+.| +.. +|+++
T Consensus 398 sY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~ 445 (720)
T PRK13578 398 FYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPF 445 (720)
T ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeec
Confidence 99999999887776543345677788888889999988 443 77776
No 238
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=1.8e-15 Score=143.19 Aligned_cols=237 Identities=16% Similarity=0.074 Sum_probs=145.1
Q ss_pred HHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCC-CeEEEecCCCCccccccccccCCcccccccceeEEeec
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY 159 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (358)
.|+.+++++|++++ .|.+++|+ +++..++.+++.+| |+|++..|.|+.+. ...+..|..+..+++
T Consensus 64 lr~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~---------~~~~~~g~~~~~v~~ 130 (364)
T PRK04781 64 LRSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA---------VCARLQNAPLVEVPL 130 (364)
T ss_pred HHHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH---------HHHHHcCCEEEEEec
Confidence 34778889998874 36667774 68999999998999 78998888765321 112345654444443
Q ss_pred ccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHH--hCCEEEEechhhhhhhhccccCCCCC--
Q 018318 160 KVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPFE-- 233 (358)
Q Consensus 160 ~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~--~g~~lvvD~a~~~g~~~~~~~~~~~~-- 233 (358)
+-+.+++.+|++++.+.+...++++|++++++|| ...+.+++.++++. +++++|+|+++. .+.........++
T Consensus 131 ~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~-~f~~~~~~~~~~~~~ 209 (364)
T PRK04781 131 VDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYG-EFSDVPSAVGLLARY 209 (364)
T ss_pred CCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcch-hhcCCcchHHHHhhC
Confidence 2111234689999876664457899988888877 46677777777664 478999999953 4432110000012
Q ss_pred cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH
Q 018318 234 YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF 311 (358)
Q Consensus 234 ~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~ 311 (358)
.--+++.|++|.+ +|.|.|++++++ ++.+.+.....+. + .+.....+...++..-.....
T Consensus 210 ~~vi~~~SfSK~~gl~GlRvGy~v~~~---------------~l~~~l~~~~~~~--~-~~~~~~~~a~~~l~~~~~~~~ 271 (364)
T PRK04781 210 DNLAVLRTLSKAHALAAARIGSLIANA---------------ELIAVLRRCQAPY--P-VPTPCAALAEQALSAPALAVT 271 (364)
T ss_pred CCEEEEecChhhcccccceeeeeeCCH---------------HHHHHHHhccCCC--C-CCHHHHHHHHHHHhcccHHHH
Confidence 1237789999986 588889999887 4555555433222 1 111111111222221100123
Q ss_pred HHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 312 KAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 312 ~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
...+++..++++++.+.|++. |+.... ++.+..+|+++.
T Consensus 272 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~-p~~g~f~~~~~~ 311 (364)
T PRK04781 272 ARRVAEVRAERERLHAALAQLPGVRRVY-PSQGNFLLVRFD 311 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEC-CCCCcEEEEEcC
Confidence 455566788889999999887 764222 344566888863
No 239
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=2.8e-15 Score=141.51 Aligned_cols=263 Identities=15% Similarity=0.113 Sum_probs=158.4
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-H
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~ 108 (358)
+.+.|..+++. +||.+.+++.+.+... .+|+.. + ...| |+.+++.++++++ .|++++|+ +
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~----~---~~~l----r~~ia~~~~~~~~----~I~it~G~~~ 93 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAERV--HSYPKA----S---HADL----TAALADRWDVSPE----QVWLANGGDG 93 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhh--hcCCCC----C---HHHH----HHHHHHHhCCCcc----eEEECCCHHH
Confidence 45777776553 5788888887665321 234321 1 2233 4677888898875 35556665 6
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 109 a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
++..++.++++|||.|++..|.|..+. ......|.++..++++.+ +++.+|++++++... ++++|+++
T Consensus 94 al~~~~~~~~~~gd~V~v~~P~y~~~~---------~~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~~--~~k~i~l~ 161 (357)
T PRK14809 94 ALDYLARAMLDPGDTVLVPDPGFAYYG---------MSARYHHGEVREYPVSKA-DDFEQTADTVLDAYD--GERIVYLT 161 (357)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHH---------HHHHHcCCeEEEEecccC-cCCCcCHHHHHHhhc--CCcEEEEe
Confidence 899999999999999999998765321 122345655555555322 245678888777652 57888888
Q ss_pred CCCCC--CccchHHHHHHHHHh--CCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccC--CCCCeeEEEEeCCC
Q 018318 189 GSAYP--RDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSL--RGPRAGMIFYRKGP 260 (358)
Q Consensus 189 ~~~~~--~~~~l~~i~~la~~~--g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l--~g~~gG~i~~~~~~ 260 (358)
+++|| ...+.+++.++++.. ++++|+|+++. .+...+.....+. .--+++.|++|.+ +|.|.|++++++
T Consensus 162 ~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-- 238 (357)
T PRK14809 162 SPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYG-EFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE-- 238 (357)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhh-hccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--
Confidence 88887 456666666666543 78999999954 3332111000011 1236788999987 477889999987
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhCCceeeeC
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSLVTG 339 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~~ 339 (358)
++.+.+.....+. +.+... ..+++..+...+ +++.++..++.++++.+.|...++
T Consensus 239 -------------~~~~~~~~~~~~~---~~~~~~---~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~----- 294 (357)
T PRK14809 239 -------------EWADAYARVNTPF---AASELA---CRAGLAALDDDEHVERTVETARWAREYIREELDAPTW----- 294 (357)
T ss_pred -------------HHHHHHHHhCCCC---CCCHHH---HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCccC-----
Confidence 3555554432211 112221 122222222223 355566677777778888765432
Q ss_pred CCcceEEEEEc
Q 018318 340 GTENHLVLWDL 350 (358)
Q Consensus 340 ~~~~~~~~v~~ 350 (358)
+..+..+|+++
T Consensus 295 ~~~g~f~~~~~ 305 (357)
T PRK14809 295 ESAGNFVLAEV 305 (357)
T ss_pred CCCCCEEEEEC
Confidence 23455678776
No 240
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.70 E-value=2.4e-15 Score=143.89 Aligned_cols=310 Identities=16% Similarity=0.174 Sum_probs=169.7
Q ss_pred cccccchHHHHHHHHHHHH--hhcceeEecc----CCC-CC--HHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHH
Q 018318 11 SLETVDPEIHDLIEKEKRR--QCRGIELIAS----ENF-TS--FAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENL 81 (358)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~a~----~~~-~~--~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~ 81 (358)
++..++++.+..+...+.+ ....+.|..+ ++. +| +.+.+++.+.+......+|... .|. .++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~---~G~---~~lR~a 77 (396)
T PRK09257 4 HLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPI---EGL---AAYRQA 77 (396)
T ss_pred cCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCC---CCC---HHHHHH
Confidence 3455566655545444333 2345666655 222 23 6788887765532211123321 232 344444
Q ss_pred HHHHHHHhcCC--CCCCCCccccccCC-hHHHHHHHHhh--cCCCCeEEEecCCCCccccccccccCCcccccccceeEE
Q 018318 82 CRSRALQTFHL--DPTQWGVNVQPYSG-SPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFES 156 (358)
Q Consensus 82 ~~~~la~~~g~--~~~~~~~~v~~~sG-t~a~~~~l~a~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 156 (358)
+.+++.+..+. +++++ .++.|+| ++|+..++..+ ++|||+|++.+|.|.++.. .++..|..+..
T Consensus 78 ia~~~~~~~~~~~~~~~i--~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~---------~~~~~g~~~v~ 146 (396)
T PRK09257 78 VQELLFGADSPALAAGRV--ATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA---------IFEAAGLEVKT 146 (396)
T ss_pred HHHHhcCCCCcccccCeE--EEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH---------HHHHcCCcEEE
Confidence 44555544332 33211 1245555 56888887655 5899999999998876542 23456665444
Q ss_pred eecccCCCCCCCCHHHHHHHHhhcCC--cEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhc-cc-
Q 018318 157 LPYKVNSSTGYIDYDKLEEKALDFRP--KLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAA-QE- 227 (358)
Q Consensus 157 ~~~~~~~~~~~id~~~l~~~l~~~~~--~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~-~~- 227 (358)
+++. +++++.+|++++++++++.++ .++++++++||+ . ..+++|+++|++||+++|+|++ +.++.+. +.
T Consensus 147 v~~~-~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~ 224 (396)
T PRK09257 147 YPYY-DAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIA-YQGFGDGLEED 224 (396)
T ss_pred Eecc-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-ccccccchHHH
Confidence 4331 223568999999998874333 445557788873 2 3478999999999999999998 4444321 10
Q ss_pred cCC--CCC--c-ccEEEecCCccCC--CCCeeEEEE--eCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHH
Q 018318 228 AAN--PFE--Y-CHIVTTTTHKSLR--GPRAGMIFY--RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGA 298 (358)
Q Consensus 228 ~~~--~~~--~-~d~~~~s~~K~l~--g~~gG~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 298 (358)
... .+. . --+++.|++|.++ |.|.||+++ ++.. .+. .+...+....... ..+++.....+
T Consensus 225 ~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~--------~~~--~~~~~~~~~~~~~-~~~~~~~~q~~ 293 (396)
T PRK09257 225 AYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAE--------EAD--RVLSQLKATIRTN-YSNPPAHGAAI 293 (396)
T ss_pred HHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHH--------HHH--HHHHHHHHHhhhh-cCCCcHHHHHH
Confidence 000 011 1 2377899999873 778899874 2210 000 1222222211111 11122222222
Q ss_pred HHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHhhCC----ceeeeCCCcceEEEEEcC
Q 018318 299 LAVALKQA-----STPAFKAYAKQVKANAVALGNYLTGKG----YSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 299 l~~al~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~G----~~~~~~~~~~~~~~v~~~ 351 (358)
+...+..- .....+..++++.++++.+.+.|++.+ +++.. +..+..+|+.++
T Consensus 294 ~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~-p~gg~~~w~~l~ 354 (396)
T PRK09257 294 VATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIA-RQRGMFSYSGLT 354 (396)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-ccceEEEecCCC
Confidence 22222110 011234566778888899999998875 44443 567788998764
No 241
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.70 E-value=3.7e-15 Score=140.67 Aligned_cols=263 Identities=15% Similarity=0.065 Sum_probs=155.8
Q ss_pred cceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC---CCCCCccccccCC
Q 018318 32 RGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD---PTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~---~~~~~~~v~~~sG 106 (358)
..+.|..++. ++++.+.+++.+... . ..|+.. ....++.+.+.+++++.+|.. ++ .|+.++|
T Consensus 22 ~~i~l~~~~p~~~~~~~~~~~~~~~~~-~--~~Y~~~------~G~~~lr~~ia~~~~~~~~~~~~~~~----~I~it~G 88 (357)
T TIGR03539 22 GIVDLSVGTPVDPVPPLIRAALAAAAD-A--PGYPQT------WGTPELREAIVDWLERRRGVPGLDPT----AVLPVIG 88 (357)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHh-h--CCCCcc------cCCHHHHHHHHHHHHHhcCCCCCCcC----eEEEccC
Confidence 3456665533 346777777765432 1 123321 112345555567777766643 43 3556666
Q ss_pred -hHHHHHHHHhh-cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcE
Q 018318 107 -SPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKL 184 (358)
Q Consensus 107 -t~a~~~~l~a~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~ 184 (358)
++++..++..+ +++||.|++..|.|.++.. .+...|++ ++.++ |++. +...++++
T Consensus 89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~---------~~~~~g~~--~~~v~--------~~~~----l~~~~~~~ 145 (357)
T TIGR03539 89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEV---------GALLAGAT--PVAAD--------DPTE----LDPVGPDL 145 (357)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHH---------HHHhcCCE--EeccC--------Chhh----cCccCccE
Confidence 46888887777 7999999999998865431 12344543 33332 2222 22246888
Q ss_pred EEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--------cccEEEecCCccC--CCC
Q 018318 185 IICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--------YCHIVTTTTHKSL--RGP 249 (358)
Q Consensus 185 v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--------~~d~~~~s~~K~l--~g~ 249 (358)
|++++++||+ .. .+++|.++|++||+++|+|+++. .+.+.+.....+. .-.+++.|++|.+ +|.
T Consensus 146 v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~ 224 (357)
T TIGR03539 146 IWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYL-ELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGY 224 (357)
T ss_pred EEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh-hhccCCCCccceecccCCCccccEEEEeccccccCCCce
Confidence 8888888773 33 47789999999999999999964 3333221111111 1237889999985 678
Q ss_pred CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 018318 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (358)
Q Consensus 250 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (358)
++|++++++ ++.+.+......... +++.....++..++.. ........+++.++++++.+.|
T Consensus 225 R~G~~i~~~---------------~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L 286 (357)
T TIGR03539 225 RAGFVAGDP---------------ALVAELLTVRKHAGL-MVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPAL 286 (357)
T ss_pred eEEEEecCH---------------HHHHHHHHHHhhccc-CCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 899999876 344444332211111 1222222222333321 1223555667778888999999
Q ss_pred hhCCceeeeCCCcceEEEEEc
Q 018318 330 TGKGYSLVTGGTENHLVLWDL 350 (358)
Q Consensus 330 ~~~G~~~~~~~~~~~~~~v~~ 350 (358)
++.|+++.. +..+..+|++.
T Consensus 287 ~~~g~~~~~-p~~~~~~~~~~ 306 (357)
T TIGR03539 287 EKAGFRIDH-SEAGLYLWATR 306 (357)
T ss_pred HHcCCCCcC-CCccEEEEEEC
Confidence 988988764 45677788875
No 242
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.69 E-value=2.6e-15 Score=144.08 Aligned_cols=224 Identities=16% Similarity=0.213 Sum_probs=130.6
Q ss_pred ccCChHHHHHHHH---hhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc-CCCCCCCCHHHHHHHHh
Q 018318 103 PYSGSPANFAAYT---AVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV-NSSTGYIDYDKLEEKAL 178 (358)
Q Consensus 103 ~~sGt~a~~~~l~---a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~id~~~l~~~l~ 178 (358)
+.+++.|+..++. ++++|||+|++.+|.|..+.. .++..|+.+. +++. +++++.+|++.++++++
T Consensus 103 t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~---------~~~~~G~~~~--~v~l~~~~~~~~d~~~l~~~~~ 171 (404)
T PTZ00376 103 ALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN---------IFKSAGLNVK--EYRYYDPKTKGLDFDGMLEDLR 171 (404)
T ss_pred ccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH---------HHHHcCCcee--eccccCcccCCcCHHHHHHHHH
Confidence 3444567666653 668999999999998876542 2355676544 4444 22357899999999986
Q ss_pred hc--CCcEEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccc---cC--CCCC-c--ccEEEecCC
Q 018318 179 DF--RPKLIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQE---AA--NPFE-Y--CHIVTTTTH 243 (358)
Q Consensus 179 ~~--~~~~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~---~~--~~~~-~--~d~~~~s~~ 243 (358)
+. +++++++++++||+ . ..+++|.++|++||+++|+|++ +.++.+.+. .. ..+. . --+++.|++
T Consensus 172 ~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfS 250 (404)
T PTZ00376 172 TAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMA-YQGFASGDLDKDAYAIRLFAERGVEFLVAQSFS 250 (404)
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehh-hcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 43 34566678888873 2 3578899999999999999999 444443210 00 0011 1 137889999
Q ss_pred ccC--CCCCeeEEE---EeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhc--c---HHHHH
Q 018318 244 KSL--RGPRAGMIF---YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS--T---PAFKA 313 (358)
Q Consensus 244 K~l--~g~~gG~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~--~---~~~~~ 313 (358)
|.+ +|.|-|+++ .+++.. . .+...+....... .++.+.....+...++..-. . +..+.
T Consensus 251 K~~~~~GlRvG~~~~~~~~~~~~---------~--~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 318 (404)
T PTZ00376 251 KNMGLYGERIGALHIVCANKEEA---------A--NVLSQLKLIIRPM-YSSPPIHGARIADRILSDPELRAEWLSELKE 318 (404)
T ss_pred CcccccccccceEEEEeCCHHHH---------H--HHHHHHHHHHhhh-cCCCchHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 986 478889984 333200 0 1222222211111 11112122222222221100 0 11234
Q ss_pred HHHHHHHHHHHHHHHHhhCCc----eeeeCCCcceEEEEEcC
Q 018318 314 YAKQVKANAVALGNYLTGKGY----SLVTGGTENHLVLWDLR 351 (358)
Q Consensus 314 ~~~~~~~~~~~l~~~L~~~G~----~~~~~~~~~~~~~v~~~ 351 (358)
..++++++++.+.+.|++.|+ ++.. +..+..+|+.++
T Consensus 319 ~~~~~~~~r~~l~~~L~~~~~~~~~~~~~-p~gg~f~~~~~~ 359 (404)
T PTZ00376 319 MSGRIQNMRQLLYDELKALGSPGDWEHII-NQIGMFSFTGLT 359 (404)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcccccc-cCceEEEecCCC
Confidence 456678889999999988753 3333 466778888753
No 243
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.68 E-value=1.6e-14 Score=130.24 Aligned_cols=250 Identities=17% Similarity=0.249 Sum_probs=139.5
Q ss_pred HHHHHHHhccccc--CC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccc--cccCChHHHHHHHHhhc
Q 018318 45 FAVIEALGSALTN--KY--SEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNV--QPYSGSPANFAAYTAVL 118 (358)
Q Consensus 45 ~~V~~a~~~~~~~--~~--~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v--~~~sGt~a~~~~l~a~~ 118 (358)
..|++|+.+.=.+ ++ .+||.. +...++.|| +-.|+.||++.+ .| .+.|||+|+..++.+++
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY-----~D~GRd~le----~iyA~vfgaE~A----LVRpq~vSGTHAi~~~Lfg~L 93 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGY-----DDIGRDKLE----RIYADVFGAEDA----LVRPQFVSGTHAIALALFGVL 93 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-T-----T-HHHHHHH----HHHHHHCT-SEE----EEETTS-SHHHHHHHHHHHH-
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCC-----CCccHHHHH----HHHHHHhCchhh----hhcccccchHHHHHHHHHhcC
Confidence 4677777654222 11 223322 456777888 678999999973 44 45799999999999999
Q ss_pred CCCCeEEEec-CCCCcccc-ccccc-cCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC-CC-
Q 018318 119 EPHDRIMGLD-LPSGGHLT-HGYYT-SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA-YP- 193 (358)
Q Consensus 119 ~~gd~Vl~~~-~~~~~~~~-~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~-~~- 193 (358)
+|||+++... ..|-..-. .+... ..| .+.-.|+.++.+++ . +++.+|++.+++++++ ++|+|.+.-|- +.
T Consensus 94 rpGD~ll~~tG~PYDTL~~VIG~~g~~~G-SL~e~Gi~Y~~v~L--~-~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~ 168 (403)
T PF06838_consen 94 RPGDELLSITGKPYDTLEEVIGIRGNGPG-SLKEFGIKYREVPL--T-EDGTIDWEAIKKALKP-NTKMVLIQRSRGYSW 168 (403)
T ss_dssp -TT-EEEESSSS--CCHHHHHTSSSSSSS-STGGGT-EEEE--B----TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSS
T ss_pred CCCCeEEEcCCCchhhHHHHhCCCCCCCC-ChHHhCceeEEEee--c-CCCCcCHHHHHHhhcc-CceEEEEecCCCCCC
Confidence 9999998754 22210000 00000 000 12234554454544 3 3689999999999984 78999875442 22
Q ss_pred ----CccchHHHHHHHHHh--CCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccCCC---CCeeEEEEeCCCCCC
Q 018318 194 ----RDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRG---PRAGMIFYRKGPKPP 263 (358)
Q Consensus 194 ----~~~~l~~i~~la~~~--g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~g---~~gG~i~~~~~~~~~ 263 (358)
.+.+++++.+++|+. +++++||.|.. -++- ...|.. |+|++++|+-|+.+| |.||++++++
T Consensus 169 R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG-EFvE---~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~----- 239 (403)
T PF06838_consen 169 RPSLTIEEIKEIIKFVKEINPDVIIFVDNCYG-EFVE---TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK----- 239 (403)
T ss_dssp S----HHHHHHHHHHHHHH-TTSEEEEE-TTT-TTTS---SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH-----
T ss_pred CCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc-eecc---ccCccccchhheeccceeCCCCCccCcCCEEechH-----
Confidence 234566666666665 89999999943 3331 123444 999999999999754 6899999988
Q ss_pred CCCCCCCccccHHHHhhhh-cCCCCcC--CCChhHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHHHHHhhCCceee
Q 018318 264 KKGQPEGAVYDFEDKINFA-VFPSLQG--GPHNHQIGALAVALKQASTPAF---KAYAKQVKANAVALGNYLTGKGYSLV 337 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~al~~al~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~G~~~~ 337 (358)
++.++...+ ..|++.. ++.... .+.+. .++ .+.+.+..+-+.+....++++||++.
T Consensus 240 ----------~lVe~~a~RLTaPGiG~e~G~t~~~-------~R~~~-QGlFlAP~vV~eAlKgaif~A~~fe~lG~~v~ 301 (403)
T PF06838_consen 240 ----------DLVERAAYRLTAPGIGKEVGATLGT-------NRLMF-QGLFLAPHVVGEALKGAIFAAALFEKLGFEVS 301 (403)
T ss_dssp ----------HHHHHHHHHHS-TTTGGGSS--TTT-------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTT-EEE
T ss_pred ----------HHHHHHHhhhcCCccccccccCcch-------HHHHH-hHHhhchHHHHHHHHHHHHHHHHHHHcCCcCC
Confidence 566655432 3444321 111111 11111 121 45666677778888888899999998
Q ss_pred eC
Q 018318 338 TG 339 (358)
Q Consensus 338 ~~ 339 (358)
+.
T Consensus 302 P~ 303 (403)
T PF06838_consen 302 PK 303 (403)
T ss_dssp S-
T ss_pred CC
Confidence 74
No 244
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.68 E-value=5.8e-15 Score=139.16 Aligned_cols=264 Identities=17% Similarity=0.123 Sum_probs=161.4
Q ss_pred ceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HH
Q 018318 33 GIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PA 109 (358)
Q Consensus 33 ~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a 109 (358)
.+.|..+++. +|+.+.+++.+.+... ..|+. ....+ .|+.++++++++++ .|++++|+ ++
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~--~~Y~~-------~~~~~----lr~~ia~~~~~~~~----~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDKL--VEYPD-------PDYLE----LRKRIASFEQLDLE----NVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHhh--hcCCC-------ccHHH----HHHHHHHHhCCChh----hEEECCCHHHH
Confidence 4667666554 4789999888765321 12332 11223 35778888898875 35567775 58
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
+..++.++ .+ +.|++..|.|+.+.. .++..|..+..+++ +.+ ++.+| +++.+.+.+ ++++|+++
T Consensus 84 l~~~~~~~-~~-~~v~i~~P~y~~~~~---------~~~~~g~~~~~~~~--~~~~~~~~d-~~~~~~~~~-~~~~v~~~ 148 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILAPTFAEYER---------ALKAFDAEIEYAEL--TEETNFAAN-EIVLEEIKE-EIDLVFLC 148 (354)
T ss_pred HHHHHHHh-CC-CcEEEecCChHHHHH---------HHHHcCCeeEEEeC--ccccCCCcc-HHHHHhhcc-CCCEEEEe
Confidence 88777775 44 688899988765431 22345654444443 322 35788 666666643 68888888
Q ss_pred CCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---Cc--ccEEEecCCccC--CCCCeeEEEE
Q 018318 189 GSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY--CHIVTTTTHKSL--RGPRAGMIFY 256 (358)
Q Consensus 189 ~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~~--~d~~~~s~~K~l--~g~~gG~i~~ 256 (358)
+|+||+ .. .+++|.++|++||+++|+|+++ ..+...+.....+ +. --+++.|++|.+ +|.|.|++++
T Consensus 149 ~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~ 227 (354)
T PRK06358 149 NPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAF-MDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLT 227 (354)
T ss_pred CCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcc-cccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeec
Confidence 888873 33 4789999999999999999994 4444332111111 11 227789999986 5778899988
Q ss_pred eCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHhhC-Cc
Q 018318 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF-KAYAKQVKANAVALGNYLTGK-GY 334 (358)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-G~ 334 (358)
+++ .+.+.+.....+. +.+.....+...++ ....+ ...++.+.++++++.+.|++. |+
T Consensus 228 ~~~--------------~~~~~~~~~~~~~---~~~~~~q~~~~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 287 (354)
T PRK06358 228 SNK--------------NLAEKLLQMREPW---SINTFADLAGQTLL---DDKEYIKKTIQWIKEEKDFLYNGLSEFKGI 287 (354)
T ss_pred CCH--------------HHHHHHHHhCCCC---cchHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 653 3545554432211 11111111222222 22223 566777888899999999887 77
Q ss_pred eeeeCCCcceEEEEEcC
Q 018318 335 SLVTGGTENHLVLWDLR 351 (358)
Q Consensus 335 ~~~~~~~~~~~~~v~~~ 351 (358)
++.. +..+ .+|+.+.
T Consensus 288 ~~~~-~~g~-f~~~~~~ 302 (354)
T PRK06358 288 KVYK-PSVN-FIFFKLE 302 (354)
T ss_pred EEcC-Ccce-EEEEEcC
Confidence 7765 3333 5777753
No 245
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.68 E-value=9.3e-16 Score=144.00 Aligned_cols=269 Identities=13% Similarity=0.086 Sum_probs=165.2
Q ss_pred eEeccCCCCCHH-HHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHH
Q 018318 35 ELIASENFTSFA-VIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (358)
Q Consensus 35 ~l~a~~~~~~~~-V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~ 113 (358)
.+.+++..+.|. .++++.+..... .++ ..++.+.+ +++.+.|+++|+++.+ ..+.++..|||.++.++
T Consensus 6 ~f~~gp~~~~~~~~~~~~~~~~~~~--------~HR-s~~F~~i~-~e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa 74 (374)
T TIGR01365 6 CFSSGPCAKRPGWSIEELKNAPLGR--------SHR-SKLGKEKL-AEAIKKTREMLGVPAD-YLIGIVPASDTGAVEMA 74 (374)
T ss_pred CcCCCccCCCchhhHHHHhhhhccc--------CcC-CHHHHHHH-HHHHHHHHHHhCCCCC-cEEEEECCchHHHHHHH
Confidence 345677777777 666665433221 122 33555544 5678999999998532 11456677899999999
Q ss_pred HHhhc-CCCCeEEEecCCCCccccccccccCCcccccccc-eeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC--
Q 018318 114 YTAVL-EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI-YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG-- 189 (358)
Q Consensus 114 l~a~~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~-- 189 (358)
+.+++ ++||+|++.. .|+..+.. ..++..|. .+..+..+ .+..+|+++++. + .. |++++
T Consensus 75 ~~nl~~~~g~~vLv~g-----~FG~r~~~---eia~~~g~~~v~~l~~~---~g~~~~~~~ve~--~---~~-v~~vhnE 137 (374)
T TIGR01365 75 LWSMLGCRGVDVLAWE-----SFGKGWVT---DVTKQLKLPDVRVLEAE---YGKLPDLKKVDF--K---ND-VVFTWNG 137 (374)
T ss_pred HHHcCCCCCCeEEEEC-----HHHHHHHH---HHHHhcCCCCcEEEcCC---CCCCCCHHHcCC--C---CC-EEEecCC
Confidence 99998 5899998753 22221100 11233555 24444332 234789999873 1 12 33443
Q ss_pred CCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeCCCCC-CCCCC
Q 018318 190 SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKKGQ 267 (358)
Q Consensus 190 ~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~~~~ 267 (358)
+++|...|+++++..+ ++++++||+..++|.. +.+++++|++++|.+|+|++|+| ++++.+++..+ .+...
T Consensus 138 TSTGv~npv~~i~~~~--~~~lliVDavSs~g~~-----~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~ 210 (374)
T TIGR01365 138 TTSGVRVPNGDFIPAD--REGLTICDATSAAFAQ-----DLDYHKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYT 210 (374)
T ss_pred Cchheecccccccccc--CCCcEEEEccchhcCC-----CCChhHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcC
Confidence 5566778887665322 5899999998666532 23445799999999999999999 78888775322 11111
Q ss_pred CCCccccHHHH------hhhhcCCCCcCCCChhHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHhhCC-ceeee
Q 018318 268 PEGAVYDFEDK------INFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKG-YSLVT 338 (358)
Q Consensus 268 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~G-~~~~~ 338 (358)
+.-.+..+.+. ........+..+|....+.++..+++.+.++ +++.+.+|+.++++.+++++++.| +.++.
T Consensus 211 ~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~ 289 (374)
T TIGR01365 211 PAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLA 289 (374)
T ss_pred CCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 10000001000 0000001123345666666667777766554 589999999999999999999999 77765
No 246
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.68 E-value=2.5e-14 Score=137.19 Aligned_cols=279 Identities=14% Similarity=0.090 Sum_probs=153.2
Q ss_pred ceeEeccCCC--CCHHHHHHHhcccccCCC----CCCCCCCCCCCchhHHHHHHHHHHHHHHhc---CCCCCCCCccccc
Q 018318 33 GIELIASENF--TSFAVIEALGSALTNKYS----EGMPGNRYYGGNEFIDEIENLCRSRALQTF---HLDPTQWGVNVQP 103 (358)
Q Consensus 33 ~~~l~a~~~~--~~~~V~~a~~~~~~~~~~----~g~~~~~~~~~~~~~~~le~~~~~~la~~~---g~~~~~~~~~v~~ 103 (358)
.+.|..+++. +++.|.+++.+.+.+... .+|.. ......+. +.+++++ +++++ .|++
T Consensus 35 ~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p------~~g~~~lr----~aia~~~~~~~~~~d----~I~i 100 (402)
T TIGR03542 35 IIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGP------EQGYPFLR----EAIAENDYRGRIDPE----EIFI 100 (402)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCC------CCCCHHHH----HHHHHHHHhcCCCHH----HEEE
Confidence 4666665543 578888888776643211 12211 11223443 4444443 56654 3556
Q ss_pred cCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccc-ee--------EEeecccCCC-CCCCCHHH
Q 018318 104 YSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI-YF--------ESLPYKVNSS-TGYIDYDK 172 (358)
Q Consensus 104 ~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~--------~~~~~~~~~~-~~~id~~~ 172 (358)
++|+ +++..+ ..++.+||+|++..|.|..+.. .++..|. ++ .+++++.+++ +...|++.
T Consensus 101 t~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 170 (402)
T TIGR03542 101 SDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVD---------SNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE 170 (402)
T ss_pred CCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHH---------HHHHcCCccccccccccceEEEeecchhhCCCCCccc
Confidence 7775 576654 5667899999999998875431 2233444 00 3334443322 23444321
Q ss_pred HHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---Cc---ccEEEec
Q 018318 173 LEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY---CHIVTTT 241 (358)
Q Consensus 173 l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~~---~d~~~~s 241 (358)
..++++|++++++||+ .. .+++|.++|++||+++|+|+++. .+...+..+.++ +. .-+++.|
T Consensus 171 ------~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~~~S 243 (402)
T TIGR03542 171 ------EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYS-AFISDPSLPHSIFEIPGAKECAIEFRS 243 (402)
T ss_pred ------cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhh-hhccCCCCCcchhhCCCCcccEEEEec
Confidence 1367899888888873 33 48899999999999999999954 444332222222 22 2366899
Q ss_pred CCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHH
Q 018318 242 THKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVK 319 (358)
Q Consensus 242 ~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~ 319 (358)
++|.+ +|.|-|++++++++..... . ............. ..+.+.....+...++..-........++.+.
T Consensus 244 fSK~~g~pGlRiG~~i~~~~l~~~~~-----~--~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 315 (402)
T TIGR03542 244 FSKTAGFTGVRLGWTVVPKELTYADG-----H--SVIQDWERRQCTK-FNGASYPVQRAAEAAYAGEGLQPILEAISYYM 315 (402)
T ss_pred CccccCCCCcceEEEEecHHHhhcch-----h--hHHHHHHHHhhhc-ccCCCHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 99976 5778899999874210000 0 0011111111011 11122121111122221100011234456677
Q ss_pred HHHHHHHHHHhhCCceeeeCCCcceEEEEEcC
Q 018318 320 ANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 320 ~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
++++++.+.|++.|+++.. +..++.+|+.+.
T Consensus 316 ~~~~~~~~~L~~~~~~~~~-~~~~~f~~v~l~ 346 (402)
T TIGR03542 316 ENARILRKALEAAGFKVYG-GEHAPYLWVKTP 346 (402)
T ss_pred HHHHHHHHHHHhcCceecC-CCceeEEEEECC
Confidence 8888999999988887764 346778999875
No 247
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.68 E-value=3.8e-15 Score=129.91 Aligned_cols=260 Identities=21% Similarity=0.196 Sum_probs=168.0
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC-CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE-PHD 122 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~-~gd 122 (358)
..+.+++|.++... ..-|+..+...+|| ...|+++|-+. .++++|||.+|+.++..-+. ||.
T Consensus 35 TdeMr~am~eA~vg--------DdVyGeD~tt~rLE----~~vA~l~GKEA-----gLFv~SGTmgNllaIm~Hc~~rg~ 97 (384)
T KOG1368|consen 35 TDEMRRAMAEASVG--------DDVYGEDPTTNRLE----QRVAELFGKEA-----GLFVPSGTMGNLLAIMVHCHQRGS 97 (384)
T ss_pred hHHHHHHHhhcccC--------cccccCCccHHHHH----HHHHHHhCccc-----eeeecccccccHHHHHHHhcCCCc
Confidence 56777777655332 23344556777898 67899999886 47789999999999888765 899
Q ss_pred eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-------CCcEEEEcCCCC--C
Q 018318 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-------RPKLIICGGSAY--P 193 (358)
Q Consensus 123 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~-------~~~~v~~~~~~~--~ 193 (358)
+|++-+..|--. +..|....+.|+ .+.++... +++.+|++++|+++... .+++|++.++++ |
T Consensus 98 eii~gd~~HI~~------~E~gg~s~l~gv--~~~tv~~e-~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~G 168 (384)
T KOG1368|consen 98 EIIVGDRAHIHR------YEQGGISQLAGV--HVRTVKNE-NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCG 168 (384)
T ss_pred eEEeccchheee------hhccChhhhccc--eeEeeeeC-CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccC
Confidence 999987654211 111122234554 34444433 57899999999999742 258898887655 4
Q ss_pred -CccchH---HHHHHHHHhCCEEEEechhhhhh-hhccccCCCCC----cccEEEecCCccCCCCCeeEEEEeCCCCCCC
Q 018318 194 -RDWDYA---RFRAVADKCGALLLCDMAHISGL-VAAQEAANPFE----YCHIVTTTTHKSLRGPRAGMIFYRKGPKPPK 264 (358)
Q Consensus 194 -~~~~l~---~i~~la~~~g~~lvvD~a~~~g~-~~~~~~~~~~~----~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~ 264 (358)
...|++ ++.++|++||+.+++|.|...-. +..+ .+++ .+|.+...++|.|+.|-|.+++++++
T Consensus 169 g~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasg---V~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~----- 240 (384)
T KOG1368|consen 169 GKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASG---VPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKD----- 240 (384)
T ss_pred ceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcC---CCHHHHHHhhhhhhhhhhccCCCCcccEEEccHH-----
Confidence 556654 77889999999999999864322 1111 2332 67999999999999999999999885
Q ss_pred CCCCCCccccHHHH---hhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC-ceeeeCC
Q 018318 265 KGQPEGAVYDFEDK---INFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG-YSLVTGG 340 (358)
Q Consensus 265 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G-~~~~~~~ 340 (358)
+.++ +++.. .|+..-..+.+ ++++-. +++.+. ..++..+.++.+++.+...+ +++..+.
T Consensus 241 ----------FI~kA~~~RKal----GGGmRQsGvLa-aaaLva-l~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a 303 (384)
T KOG1368|consen 241 ----------FIDKARHFRKAL----GGGMRQSGVLA-AAALVA-LDENVP-LLRADHKRAKELAEYINTPEEIRVEVPA 303 (384)
T ss_pred ----------HHHHHHHHHHHh----cCchhHHHHHH-HHHHHH-hhcchH-HHHHHHHHHHHHHHHhccccceeeecch
Confidence 3332 33321 12221122221 222222 233343 34555667888888888775 8776644
Q ss_pred CcceEEEEEcCCCC
Q 018318 341 TENHLVLWDLRPLG 354 (358)
Q Consensus 341 ~~~~~~~v~~~~~~ 354 (358)
.+++++.+.+....
T Consensus 304 ~etNiv~~~l~q~~ 317 (384)
T KOG1368|consen 304 VETNIVNMVLCQAR 317 (384)
T ss_pred hhcceeeeeccccc
Confidence 67777776654433
No 248
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.68 E-value=1.7e-15 Score=139.69 Aligned_cols=220 Identities=18% Similarity=0.156 Sum_probs=150.1
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEecCCCCcccccccccc
Q 018318 63 MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS 142 (358)
Q Consensus 63 ~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~ 142 (358)
+-++|. +.+....+| ..++++.|++. .+.++||..|+..++..++++|++|++....|++-.. +..
T Consensus 69 ~~Ysr~--~nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~--~l~- 134 (409)
T KOG0053|consen 69 YDYSRS--GNPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLR--ILR- 134 (409)
T ss_pred cccccC--CCCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHH--HHH-
Confidence 444443 567778888 77899999986 3778999999999999999999999999988876321 100
Q ss_pred CCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhh
Q 018318 143 GGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHIS 220 (358)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~ 220 (358)
......|. +..+++ .-|++++++++++ ++++|++..|.|| ...|+++|.++||++|+++|||++-+.
T Consensus 135 --~~~~~~gi--e~~~vd------~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~ 203 (409)
T KOG0053|consen 135 --KFLPKFGG--EGDFVD------VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGS 203 (409)
T ss_pred --HHHHHhCc--eeeeec------hhhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCc
Confidence 01112332 222222 2456777888875 7899999999999 467999999999999999999998433
Q ss_pred hhhhccccCCCCC-cccEEEecCCccCCCCC---eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHH
Q 018318 221 GLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (358)
Q Consensus 221 g~~~~~~~~~~~~-~~d~~~~s~~K~l~g~~---gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (358)
+ ....++. ||||++.|.+|+|+|-. ||.++.+.+ ++..++...... +...++ .+
T Consensus 204 p-----~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~--------------~~~~~l~~~~~~-lg~~~~--p~ 261 (409)
T KOG0053|consen 204 P-----YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE--------------ELASRLKFLQED-LGWCED--PF 261 (409)
T ss_pred c-----cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH--------------HHHHHHHHHHHH-hcCCCC--HH
Confidence 2 1234566 89999999999998753 688888743 455544432211 111111 11
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 297 ~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
.+ ..-++-+ +.+.-+++++.+|+..++++|.+.
T Consensus 262 ~~-~ll~Rgl--ktl~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 262 DL-FLLSRGL--KTLHLRINKHSENALKIALLLEAH 294 (409)
T ss_pred HH-HHHhcCc--chhhhhHHHHHHHHHHHHHHhhhC
Confidence 11 1222222 345677888999999999999886
No 249
>PRK07908 hypothetical protein; Provisional
Probab=99.68 E-value=1.3e-14 Score=136.64 Aligned_cols=262 Identities=16% Similarity=0.117 Sum_probs=159.5
Q ss_pred hcceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-
Q 018318 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (358)
Q Consensus 31 ~~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt- 107 (358)
...+.+..+++. +|+.+++++.+.+... .+|+.. ..... .|+++++++|++++ .|.+++|+
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~------~g~~~----lr~aia~~~~~~~~----~I~it~Ga~ 85 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPST------EDERR----ARAAVAARHGRTPD----EVLLLAGAA 85 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCc------cchHH----HHHHHHHHhCcChh----hEEECCCHH
Confidence 356777777653 5788999988765432 234331 11223 35788889998875 35556665
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 018318 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (358)
Q Consensus 108 ~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~ 187 (358)
+++..++. +++| .+++..|.+..+. ..++..|+. ++.++.+. ++.+|++++ + .+++++++
T Consensus 86 ~al~~~~~--l~~~-~viv~~P~y~~~~---------~~~~~~G~~--i~~v~~~~-~~~~d~~~l----~-~~~~~i~l 145 (349)
T PRK07908 86 EGFALLAR--LRPR-RAAVVHPSFTEPE---------AALRAAGIP--VHRVVLDP-PFRLDPAAV----P-DDADLVVI 145 (349)
T ss_pred HHHHHHHh--cCCC-eEEEeCCCChHHH---------HHHHHcCCE--EEeeccCc-ccCcChhHh----c-cCCCEEEE
Confidence 68877776 5775 5556666654332 123445654 44444442 367888754 3 36788888
Q ss_pred cCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C-cccEEEecCCccC--CCCCeeEEEEeCC
Q 018318 188 GGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YCHIVTTTTHKSL--RGPRAGMIFYRKG 259 (358)
Q Consensus 188 ~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~-~~d~~~~s~~K~l--~g~~gG~i~~~~~ 259 (358)
++++|| ...+.++|.++|+ ++.++|+|+++. .+.. +. ..++ + .-.+++.|+||.+ +|.|.|+++.++
T Consensus 146 ~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~-~~~~-~~-~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~- 220 (349)
T PRK07908 146 GNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFA-DAVP-GE-PESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP- 220 (349)
T ss_pred cCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcch-hhcc-CC-ccccccccCCCEEEEeecccccCCccceeeeeecCH-
Confidence 888877 4678899999997 477899999964 2222 21 1122 2 2236677999975 577889999876
Q ss_pred CCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeC
Q 018318 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG 339 (358)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~ 339 (358)
++.+.+........ .+....+++...+.......++..+++..++++++.+.|++.|+++..
T Consensus 221 --------------~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~- 282 (349)
T PRK07908 221 --------------DVLARLTRGRAHWP---VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVD- 282 (349)
T ss_pred --------------HHHHHHHhcCCCCC---ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEecc-
Confidence 35555543322211 111222222211110011234566777888899999999988888765
Q ss_pred CCcceEEEEEcC
Q 018318 340 GTENHLVLWDLR 351 (358)
Q Consensus 340 ~~~~~~~~v~~~ 351 (358)
+..+..+|+++.
T Consensus 283 p~~g~~~~~~~~ 294 (349)
T PRK07908 283 PAAAPFVLVRVP 294 (349)
T ss_pred CCCceEEEEECC
Confidence 456777888764
No 250
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.68 E-value=2.5e-15 Score=137.77 Aligned_cols=265 Identities=19% Similarity=0.159 Sum_probs=173.0
Q ss_pred cCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh
Q 018318 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV 117 (358)
Q Consensus 39 ~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~ 117 (358)
+..+..+.+.+++.++ +-...+++...|. +...++| +..|+++|+++ .+.++-|...|.+.+.++
T Consensus 152 ~~g~ca~~~~~~~~ky-----gl~~css~~e~G~~~~hkelE----~l~A~f~g~e~-----a~vF~mGf~TNs~~~p~l 217 (519)
T KOG1357|consen 152 SVGPCAEASLKSFDKY-----GLSRCSSRHEAGTTEEHKELE----ELVARFLGVED-----AIVFSMGFATNSMNIPSL 217 (519)
T ss_pred cCCcCChHHHHHHHHh-----cccccccchhcccHHHHHHHH----HHHHHhcCCcc-----eEEEeccccccccCccee
Confidence 3344567888777543 2233344443343 3445666 78899999997 366888888888889999
Q ss_pred cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc---------CC--cEEE
Q 018318 118 LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---------RP--KLII 186 (358)
Q Consensus 118 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~---------~~--~~v~ 186 (358)
+.||.-|+.....|.++.. .+++.|+..++ ++ +.|.++||++|++. +| ++++
T Consensus 218 ~~~gsLIiSDelNHaSi~~---------GaRLSgAtiRV--fk------HNdm~~LEr~Lrd~I~~gqP~Thrp~kki~i 280 (519)
T KOG1357|consen 218 LGKGSLIISDELNHASLIT---------GARLSGATTRV--FR------HNDMQGLERLLRDAIVYGQPKTHRPWKKILI 280 (519)
T ss_pred ecCCcceeeccccchheec---------cccccCceEEE--Ee------cCCHHHHHHHHHHHHhcCCCCcCCcchheee
Confidence 9999999999998887652 23456664333 32 45667777777652 23 3343
Q ss_pred E-cC--CCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhcccc--C--CCCC--cccEEEecCCccCCCCCeeEEEEe
Q 018318 187 C-GG--SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA--A--NPFE--YCHIVTTTTHKSLRGPRAGMIFYR 257 (358)
Q Consensus 187 ~-~~--~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~--~~~~--~~d~~~~s~~K~l~g~~gG~i~~~ 257 (358)
+ .. ++-+.++++.++.+++|+|.++++.|+||+.|+.+.... . .-.+ .+|++.+++.|.+ |.-||++.++
T Consensus 281 ivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiags 359 (519)
T KOG1357|consen 281 CVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGS 359 (519)
T ss_pred eeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecCc
Confidence 3 22 345678899999999999999999999999998754211 1 1112 7899999999987 4578999998
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHH-HHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGAL-AVALKQAST----PAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al-~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++ +.+.+.........++...+-++.. ..+++.+.. ...++.++++.+|+.+++..|+..
T Consensus 360 k~---------------lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 360 KE---------------LIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM 424 (519)
T ss_pred HH---------------HHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC
Confidence 84 4444433211111122222222222 234444331 235788999999999999999999
Q ss_pred CceeeeCCCcceEEEEEcC
Q 018318 333 GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 333 G~~~~~~~~~~~~~~v~~~ 351 (358)
||-++. ...++.+++-+.
T Consensus 425 gfivyG-~~dSpVvplll~ 442 (519)
T KOG1357|consen 425 GFIVYG-NNDSPVVPLLLY 442 (519)
T ss_pred cEEEec-CCCCCcceeeec
Confidence 998886 344545444443
No 251
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.67 E-value=1.1e-14 Score=143.64 Aligned_cols=256 Identities=18% Similarity=0.156 Sum_probs=162.5
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----C-----CC-------------------
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE----P-----HD------------------- 122 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~----~-----gd------------------- 122 (358)
..+....+|+++.+|+++++|.+. .|| +++++||.||..++.+..+ | .+
T Consensus 117 ~SP~~t~lE~~vi~~la~l~G~~~-~~G--~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~ 193 (608)
T TIGR03811 117 SSPATSQMEEEVGKEFATLMGYKN-GWG--HIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKE 193 (608)
T ss_pred cCchHHHHHHHHHHHHHHHhCCCC-CCe--EEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccc
Confidence 446677899999999999999976 354 5578889999887655421 0 00
Q ss_pred ------------------------------eEEEecCCCCccccccccccCCccccccccee-EEeecccCCCCCCCCHH
Q 018318 123 ------------------------------RIMGLDLPSGGHLTHGYYTSGGKKISATSIYF-ESLPYKVNSSTGYIDYD 171 (358)
Q Consensus 123 ------------------------------~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~id~~ 171 (358)
+++++. .+|+|.. +.+...|.+. .++.+++| +++.+|++
T Consensus 194 ~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~---~aHyS~~------KAa~ilGlG~~~vv~VpvD-~~~rmd~~ 263 (608)
T TIGR03811 194 IMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQ---TKHYSWL------KAADIIGIGLDQVIPVPVD-SNYRMDIN 263 (608)
T ss_pred ccccccccccchhhhhhhccccccccccceEEEECC---CccHHHH------HHHHHcCCCcccEEEeecC-CCCcCCHH
Confidence 233333 2354432 3445566542 24455655 47899999
Q ss_pred HHHHHHhhc---C--CcEEE--EcCCCCCCccchHHHHHHH---HHhCC--EEEEechhhhhhh----hcc---------
Q 018318 172 KLEEKALDF---R--PKLII--CGGSAYPRDWDYARFRAVA---DKCGA--LLLCDMAHISGLV----AAQ--------- 226 (358)
Q Consensus 172 ~l~~~l~~~---~--~~~v~--~~~~~~~~~~~l~~i~~la---~~~g~--~lvvD~a~~~g~~----~~~--------- 226 (358)
+|++.|++. + |-+|+ ++++..|.+.||++|+++| +++|+ +++||+|.+ |.. ...
T Consensus 264 ~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyG-G~~~~l~~~~~~~~~p~~~ 342 (608)
T TIGR03811 264 ELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYG-GYGRAIFLDEDDNFIPYDD 342 (608)
T ss_pred HHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeecccc-chhhhhhccccccccccch
Confidence 999998642 2 22233 3566788899999999999 67887 699999954 421 110
Q ss_pred --------------------ccCC---CCCcccEEEecCCccCCCCCe-eEEEEeCCCCCCCCCCCCCccccHHHHhhh-
Q 018318 227 --------------------EAAN---PFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINF- 281 (358)
Q Consensus 227 --------------------~~~~---~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~- 281 (358)
.... -+..+|.++..+||++..|-+ |++++++. .+.+.+..
T Consensus 343 ~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~--------------~~~~~~~~~ 408 (608)
T TIGR03811 343 LQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI--------------RMRDVISYF 408 (608)
T ss_pred hhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH--------------HHHHHHhcC
Confidence 0000 123789999999999877765 88888774 11111110
Q ss_pred --------hc------CCCCcCCCChhHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhhCC-------cee--
Q 018318 282 --------AV------FPSLQGGPHNHQIGALAVALKQA--STPAFKAYAKQVKANAVALGNYLTGKG-------YSL-- 336 (358)
Q Consensus 282 --------~~------~~~~~~~~~~~~~~al~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~G-------~~~-- 336 (358)
.. .....++......++++.+++.+ ..+++.+++++..++++++.+.|++.+ |++
T Consensus 409 a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~ 488 (608)
T TIGR03811 409 ATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHP 488 (608)
T ss_pred cchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEe
Confidence 00 01223443334455677888876 556889999999999999999998854 444
Q ss_pred eeCCCcceEEEEEcCCCCC
Q 018318 337 VTGGTENHLVLWDLRPLGL 355 (358)
Q Consensus 337 ~~~~~~~~~~~v~~~~~~~ 355 (358)
.. +...+++.....+.|.
T Consensus 489 ~~-~pdlniV~Fr~~~~g~ 506 (608)
T TIGR03811 489 LT-KPDFNMVDYVFNEKGN 506 (608)
T ss_pred cC-CCCcceEEEEEecCCC
Confidence 22 2344455555555554
No 252
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=2e-15 Score=142.32 Aligned_cols=227 Identities=17% Similarity=0.152 Sum_probs=143.7
Q ss_pred HHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCC-CeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 83 RSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 83 ~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
++.+++++|++++ .|.+++|+ +++..++.++++|| |+|++..|.|..+. ..++..|+++. .++
T Consensus 66 r~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~---------~~~~~~g~~v~--~v~ 130 (354)
T PRK04635 66 INAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA---------ISAETFNVGVK--ALP 130 (354)
T ss_pred HHHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH---------HHHHHcCCEEE--EEe
Confidence 4778889999885 36667776 59999999999999 89999998776432 12234565444 444
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHh-CCEEEEechhhhhhhhccccCCCC-C--c
Q 018318 161 VNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKC-GALLLCDMAHISGLVAAQEAANPF-E--Y 234 (358)
Q Consensus 161 ~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~-g~~lvvD~a~~~g~~~~~~~~~~~-~--~ 234 (358)
.+ +++.+|++.++. + .++++|++++++|| ...+.+++.++++.. ++++|+|+++. .+...... ..+ . .
T Consensus 131 ~~-~~~~~~~~~l~~-~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~-~~~~~~s~-~~~~~~~~ 204 (354)
T PRK04635 131 LT-ADYQLPLDYIEQ-L--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI-EFCPEYSV-ADLLASYP 204 (354)
T ss_pred cC-CCCCCCHHHHHh-c--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH-hhccCcch-HHHHhhCC
Confidence 44 256789988873 3 37899999988887 467888888888764 79999999964 33211100 011 1 1
Q ss_pred ccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHH
Q 018318 235 CHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (358)
Q Consensus 235 ~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~ 312 (358)
--+++.|+||++ +|.|.|++++++ ++.+.+.....+. +.+.....+...++.....+...
T Consensus 205 ~~iv~~S~SK~~~l~GlRlG~~i~~~---------------~~~~~l~~~~~~~---~~~~~~~~~a~~~l~~~~~~~~~ 266 (354)
T PRK04635 205 NLVVLRTLSKAFALAGARCGFTLANE---------------ELIEILMRVIAPY---PVPLPVSEIATQALSEAGLARMK 266 (354)
T ss_pred CEEEEechHHHhhhhHHHHhhhhCCH---------------HHHHHHHhhcCCC---CCCHHHHHHHHHHHhcccHHHHH
Confidence 126788999986 466779998877 3555444322221 11111111112222211112234
Q ss_pred HHHHHHHHHHHHHHHHHhhCC-ceeeeCCCcceEEEEEc
Q 018318 313 AYAKQVKANAVALGNYLTGKG-YSLVTGGTENHLVLWDL 350 (358)
Q Consensus 313 ~~~~~~~~~~~~l~~~L~~~G-~~~~~~~~~~~~~~v~~ 350 (358)
+.++++.++++++.+.|++.+ +++++ + .+..+|+++
T Consensus 267 ~~~~~~~~~r~~l~~~L~~~~~~~~~~-~-~g~f~~~~~ 303 (354)
T PRK04635 267 FQVLDLNAQGARLQAALSMYGGAKVLE-G-NGNYVLAKF 303 (354)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceECC-C-CCcEEEEEC
Confidence 556677888899999999885 77764 3 344577775
No 253
>PRK05839 hypothetical protein; Provisional
Probab=99.67 E-value=2.8e-14 Score=135.54 Aligned_cols=267 Identities=16% Similarity=0.082 Sum_probs=153.7
Q ss_pred ceeEeccCC--CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCC--CCCCCCccccccCCh-
Q 018318 33 GIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL--DPTQWGVNVQPYSGS- 107 (358)
Q Consensus 33 ~~~l~a~~~--~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~--~~~~~~~~v~~~sGt- 107 (358)
.+.+..+++ .+++.+.+++.+.... ...|+.. .| ..++.+.+.+++++.+|. +++ .|+.++|+
T Consensus 26 ~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~---~G---~~~lr~aia~~l~~~~g~~~~~~----~I~it~G~~ 93 (374)
T PRK05839 26 GLDLTIGEPQFETPKFIQDALKNNAHL--LNKYPKS---AG---EESLREAQRGFFKRRFKIELKEN----ELIPTFGTR 93 (374)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCcc----eEEEecCcH
Confidence 455555543 2467777777654321 1233321 12 234444556777887774 443 46667776
Q ss_pred HHHHHHHHhhc--CCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhcCCcE
Q 018318 108 PANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKL 184 (358)
Q Consensus 108 ~a~~~~l~a~~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~~~~~ 184 (358)
+|+..++.+++ ++||.|+++.|.|..+.. .+...|+++ ++++.+.+ ++.+|+++.+ + .++++
T Consensus 94 ~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g~~v--~~v~~~~~~~~~~d~~~~~--~--~~~k~ 158 (374)
T PRK05839 94 EVLFNFPQFVLFDKQNPTIAYPNPFYQIYEG---------AAIASRAKV--LLMPLTKENDFTPSLNEKE--L--QEVDL 158 (374)
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCchhhHH---------HHHhcCCEE--EEeecccccCCcCCcchhh--h--ccccE
Confidence 57777777764 589999999988765431 234456544 44444422 3556655432 3 25899
Q ss_pred EEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC----------cccEEEecCCccC--C
Q 018318 185 IICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----------YCHIVTTTTHKSL--R 247 (358)
Q Consensus 185 v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~----------~~d~~~~s~~K~l--~ 247 (358)
|++++++||+ . ..+++|.++|+++|+++|+|++++ .+...+..+..+. .--+++.|++|.+ +
T Consensus 159 v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 237 (374)
T PRK05839 159 VILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYS-EIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAP 237 (374)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchh-hcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCc
Confidence 9888888873 2 347788899999999999999954 3332211111110 1127789999974 6
Q ss_pred CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 018318 248 GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (358)
Q Consensus 248 g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~ 327 (358)
|.|.|++++++ ++.+.+...........+.. ...++..++. .....+..++++.++++++.+
T Consensus 238 GlRiG~ii~~~---------------~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~ 299 (374)
T PRK05839 238 GLRSGFIAGDA---------------SILKKYKAYRTYLGCASPLP-LQKAAAVAWL--DDEHAEFFRNIYAKNLKLARE 299 (374)
T ss_pred cceeEEEecCH---------------HHHHHHHHHHhhcCCCCChH-HHHHHHHHhc--cchHHHHHHHHHHHHHHHHHH
Confidence 78899999876 35554443221111111121 1222222221 122235666777777777776
Q ss_pred HHhhCCceeeeCCCcceEEEEEcC
Q 018318 328 YLTGKGYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 328 ~L~~~G~~~~~~~~~~~~~~v~~~ 351 (358)
.| |+. .+..+..+|+++.
T Consensus 300 ~l---~~~---~p~gg~fi~~~~~ 317 (374)
T PRK05839 300 IL---GIT---IPPATFYVWLPVD 317 (374)
T ss_pred hc---CCC---CCCeeEEEEEeCC
Confidence 65 443 2456778898864
No 254
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.67 E-value=6.4e-15 Score=149.32 Aligned_cols=150 Identities=17% Similarity=0.221 Sum_probs=108.8
Q ss_pred HHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC-------C-CCeEEEecCCCCccccccccccCCccccccccee
Q 018318 83 RSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE-------P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYF 154 (358)
Q Consensus 83 ~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~-------~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 154 (358)
.+++++++|.+. +.+...+|+.|..+++.++.. + .++|+++...|++++. .+...|.
T Consensus 549 q~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa---------sa~~~Gi-- 613 (954)
T PRK12566 549 EAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA---------SAQMAGM-- 613 (954)
T ss_pred HHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH---------HHHHCCC--
Confidence 489999999997 457777888888777777531 2 3567788877766542 2234565
Q ss_pred EEeecccCCCCCCCCHHHHHHHHhhcCCc--EEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCC
Q 018318 155 ESLPYKVNSSTGYIDYDKLEEKALDFRPK--LIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (358)
Q Consensus 155 ~~~~~~~~~~~~~id~~~l~~~l~~~~~~--~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~ 230 (358)
+++.++.| ++|.+|+++|++++++++++ +|++.++++. ...++++|+++||++|+++++|++|..++.. +..
T Consensus 614 eVv~Vp~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~---l~~ 689 (954)
T PRK12566 614 RVVIVECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVG---LAR 689 (954)
T ss_pred EEEEeccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccC---CCC
Confidence 44555555 47899999999999744444 4555555543 4467999999999999999999999866542 222
Q ss_pred CCC-cccEEEecCCccCCCCCe
Q 018318 231 PFE-YCHIVTTTTHKSLRGPRA 251 (358)
Q Consensus 231 ~~~-~~d~~~~s~~K~l~g~~g 251 (358)
+-+ |+|++++++||||++|.|
T Consensus 690 Pg~~GADi~~~s~HKtf~~P~G 711 (954)
T PRK12566 690 PADIGADVSHMNLHKTFCIPHG 711 (954)
T ss_pred hhhcCCCEEEecCCcccCcCcc
Confidence 334 999999999999987765
No 255
>PLN02397 aspartate transaminase
Probab=99.66 E-value=7.4e-15 Score=141.54 Aligned_cols=223 Identities=18% Similarity=0.218 Sum_probs=131.1
Q ss_pred ChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc--CCc
Q 018318 106 GSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPK 183 (358)
Q Consensus 106 Gt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~--~~~ 183 (358)
|+.++...+..++.|||+|++++|.|+.+.. .+...|.++..+++. +.+++.+|++.+++.+++. +++
T Consensus 127 Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~---------~~~~~g~~~~~v~l~-~~~~~~~d~~~l~~~l~~~~~~~~ 196 (423)
T PLN02397 127 GSLRLGAEFLARFYPGSTIYIPNPTWGNHHN---------IFRDAGVPVRTYRYY-DPKTRGLDFDGLLEDLKAAPDGSF 196 (423)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCchhHHH---------HHHHcCCeEEEeecc-cCcCCccCHHHHHHHHHhCCCCCE
Confidence 3444555555666799999999998876542 234566544444331 2234689999998888642 456
Q ss_pred EEEEcCCCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccc---cCC--CCC--c-ccEEEecCCccC--CC
Q 018318 184 LIICGGSAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQE---AAN--PFE--Y-CHIVTTTTHKSL--RG 248 (358)
Q Consensus 184 ~v~~~~~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~---~~~--~~~--~-~d~~~~s~~K~l--~g 248 (358)
+++++.++||+ . ..+++|+++|++||+++|+|++ +.++.+.+. ... .+. + --+++.|++|++ +|
T Consensus 197 ~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~-Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G 275 (423)
T PLN02397 197 VLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSA-YQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYG 275 (423)
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-cCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCcc
Confidence 66777788873 2 3577899999999999999999 556654321 000 111 1 137788999986 48
Q ss_pred CCeeEEE--EeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHh--cc---HHHHHHHHHHHHH
Q 018318 249 PRAGMIF--YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA--ST---PAFKAYAKQVKAN 321 (358)
Q Consensus 249 ~~gG~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~--~~---~~~~~~~~~~~~~ 321 (358)
+|-|+++ ..... .+. .+...+....... ..+++.....+...++..- .+ +.+++.++++.++
T Consensus 276 ~RvG~~v~~~~~~~--------~~~--~~~~~~~~~~~~~-~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~r 344 (423)
T PLN02397 276 ERVGALSVVCKSAD--------VAV--RVKSQLKLIARPM-YSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISM 344 (423)
T ss_pred ccceEEEEEeCCHH--------HHH--HHHHHHHHHHhcc-cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8989985 32210 000 1222222211111 1112212222222222110 00 1134556788889
Q ss_pred HHHHHHHHhhCC----ceeeeCCCcceEEEEEcC
Q 018318 322 AVALGNYLTGKG----YSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 322 ~~~l~~~L~~~G----~~~~~~~~~~~~~~v~~~ 351 (358)
++.+.+.|++.| +++.. ++.+..+|++++
T Consensus 345 r~~l~~~L~~~~~~~~~~~~~-p~gg~fl~~~l~ 377 (423)
T PLN02397 345 RQKLYDALEARGSPGDWSHIT-KQIGMFSFTGLN 377 (423)
T ss_pred HHHHHHHHHhcCCCCCCCccc-CCceEEEecCCC
Confidence 999999999887 66544 578888998774
No 256
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.66 E-value=1.5e-14 Score=140.30 Aligned_cols=246 Identities=19% Similarity=0.154 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccce
Q 018318 75 IDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY 153 (358)
Q Consensus 75 ~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 153 (358)
...|.+.+.+++..-.|..-+. ..|+.|+|+ +|+..++..+++|||.|++-.|+|.+... .++..|.+
T Consensus 134 ~~~LR~~ia~~l~~~~g~~~~~--~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~---------~~~~~g~~ 202 (459)
T COG1167 134 LPELREAIAAYLLARRGISCEP--EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ---------ALEALGAR 202 (459)
T ss_pred cHHHHHHHHHHHHHhcCCccCc--CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH---------HHHHcCCc
Confidence 3355555556676555654311 136667776 59999999999999999999998876542 23455654
Q ss_pred eEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC-CCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccc
Q 018318 154 FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS-AYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQE 227 (358)
Q Consensus 154 ~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~-~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~ 227 (358)
++++++| +..+|+|++++.++++++|++++..+ +|| ...+ -++|.++|++||+++|.|+.. .-+.+.+.
T Consensus 203 --~~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y-~el~~~~~ 277 (459)
T COG1167 203 --VIPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYY-GELRYDGP 277 (459)
T ss_pred --EEecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcc-hhhhcCCC
Confidence 4555554 45799999999998878999886533 455 3334 359999999999999999973 33444322
Q ss_pred cCCCCC-----cccEEEecCCccC-CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHH
Q 018318 228 AANPFE-----YCHIVTTTTHKSL-RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAV 301 (358)
Q Consensus 228 ~~~~~~-----~~d~~~~s~~K~l-~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 301 (358)
-+.++. +--+.++|++|++ +|.+.||++++.+ +.+.+.........++ +......++.
T Consensus 278 p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~---------------~~~~~~~~k~~~~~~~-s~~~Q~~la~ 341 (459)
T COG1167 278 PPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE---------------LIEKLLRLKQAADLGP-SSLSQAALAA 341 (459)
T ss_pred CCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHH---------------HHHHHHHHHHHhcCCC-ChHHHHHHHH
Confidence 222232 3348899999997 6788999999984 3333332111111111 1111111111
Q ss_pred HHHH-hccHHHHHHHHHHHHHHHHHHHHHhhCC--ceeeeCCCcceEEEEEcCC
Q 018318 302 ALKQ-ASTPAFKAYAKQVKANAVALGNYLTGKG--YSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 302 al~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~G--~~~~~~~~~~~~~~v~~~~ 352 (358)
-+.. .-.......++.+.+.++.+.+.|.+.+ ...+..+..+..+|+.+..
T Consensus 342 ~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~ 395 (459)
T COG1167 342 FLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPE 395 (459)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCC
Confidence 1110 0012234555566677778888888863 3333345667889999754
No 257
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.66 E-value=3.4e-14 Score=134.29 Aligned_cols=263 Identities=16% Similarity=0.124 Sum_probs=160.8
Q ss_pred ceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HH
Q 018318 33 GIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PA 109 (358)
Q Consensus 33 ~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a 109 (358)
.+.|..+++. +|+.+.+++.+.+.. . .+|+.. ....| |+.++++++++++ .|+.++|+ ++
T Consensus 24 ~i~l~~~~n~~~~~~~~~~a~~~~~~~-~-~~Y~~~-------~~~~L----r~aia~~~~v~~~----~I~it~G~~~~ 86 (360)
T PRK07392 24 ILDFSASINPLGPPESVIAAIQSALSA-L-RHYPDP-------DYREL----RLALAQHHQLPPE----WILPGNGAAEL 86 (360)
T ss_pred EEEeCCcCCCCCCCHHHHHHHHHHHHH-h-hcCCCc-------CHHHH----HHHHHHHhCcChh----hEEECCCHHHH
Confidence 4667766554 478899888765543 1 233321 11234 4677888888874 35567776 58
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCC----CCCHHHHHHHHhhcCCcEE
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG----YIDYDKLEEKALDFRPKLI 185 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~id~~~l~~~l~~~~~~~v 185 (358)
+..++.++ .+||.|++..|.|..+.. .++..|+.+..+++ +.+++ ..|++++++.. .+++++
T Consensus 87 i~~~~~~l-~~g~~vlv~~P~y~~~~~---------~~~~~g~~~~~v~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~ 152 (360)
T PRK07392 87 LTWAGREL-AQLRAVYLITPAFGDYRR---------ALRAFGATVKELPL--PLDQPSPGLTLRLQTLPPQL--TPNDGL 152 (360)
T ss_pred HHHHHHHh-CCCCeEEEECCCcHHHHH---------HHHHcCCeEEEEec--ccccCCcccccCHHHHHHhc--cCCCEE
Confidence 88787775 478999999998875431 23456665444444 32222 24666665543 257888
Q ss_pred EEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---Cc--ccEEEecCCccC--CCCCeeEEEE
Q 018318 186 ICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY--CHIVTTTTHKSL--RGPRAGMIFY 256 (358)
Q Consensus 186 ~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~~--~d~~~~s~~K~l--~g~~gG~i~~ 256 (358)
++++++|| ...+.++|.++|+++++ +|+|+++ ..+.+.+.....+ +. --+++.|++|.+ +|.|.|++++
T Consensus 153 ~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y-~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~ 230 (360)
T PRK07392 153 LLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAF-MDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA 230 (360)
T ss_pred EEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECch-hhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC
Confidence 88888887 46678899999999985 6779994 4554332111111 11 237889999986 6788899998
Q ss_pred eCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHhhC-Cc
Q 018318 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF-KAYAKQVKANAVALGNYLTGK-GY 334 (358)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-G~ 334 (358)
+++ +.+.+.....+. +.+.....++..++ ....+ ++..+.+.++++++.+.|++. |+
T Consensus 231 ~~~---------------~~~~~~~~~~~~---~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 289 (360)
T PRK07392 231 HPD---------------RLQRWQQWRDPW---PVNGLAAAAAIAAL---ADRDFQQQTWAWLPPAREALFQGLASLPGL 289 (360)
T ss_pred CHH---------------HHHHHHhhCCCC---CCCHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 773 444444332211 12222222222333 22233 344556778888999999886 78
Q ss_pred eeeeCCCcceEEEEEcC
Q 018318 335 SLVTGGTENHLVLWDLR 351 (358)
Q Consensus 335 ~~~~~~~~~~~~~v~~~ 351 (358)
.+.. +.++.+|+++.
T Consensus 290 ~~~~--~~~~fl~~~~~ 304 (360)
T PRK07392 290 TPLP--SAANFLLVQSQ 304 (360)
T ss_pred EECC--CCCCEEEEEcC
Confidence 7653 44566788764
No 258
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=3.1e-14 Score=128.14 Aligned_cols=275 Identities=19% Similarity=0.109 Sum_probs=170.5
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCC--CCccccccCC-hHHHHHHHHhhcC
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQ--WGVNVQPYSG-SPANFAAYTAVLE 119 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~--~~~~v~~~sG-t~a~~~~l~a~~~ 119 (358)
+++.+.+|+...+.++-++||..+. |.. .+|+.+|+++.-+.+. -.-.|+.++| ++|+..++.++.+
T Consensus 79 ts~~a~~Av~~al~Sgk~N~Yaps~---G~~-------~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~ 148 (447)
T KOG0259|consen 79 TSQEAEQAVVDALRSGKGNGYAPSV---GIL-------PARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLAN 148 (447)
T ss_pred CCHHHHHHHHHHHhcCCCCCcCCcc---ccH-------HHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcC
Confidence 4788999998888777666665432 211 2345566663321100 0012444555 6799999999999
Q ss_pred CCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc-CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--C--
Q 018318 120 PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV-NSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--R-- 194 (358)
Q Consensus 120 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~-- 194 (358)
||..|+++.|.|+-+.+ .+...+. ++..+++ .++++.+|++.+|.++++ +|.++++.+|+|| .
T Consensus 149 p~aNILlPrPGfp~Y~~---------~a~~~~l--EVR~ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPcGnVy 216 (447)
T KOG0259|consen 149 PGANILLPRPGFPLYDT---------RAIYSGL--EVRYYDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPCGNVY 216 (447)
T ss_pred CCCceecCCCCCchHHH---------hhhhcCc--eeEeecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCCcccc
Confidence 99999999986542111 1223444 5555554 345789999999999987 6666666667776 2
Q ss_pred -ccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC----ccc-EEEecCCcc-C-CCCCeeEEEEeCCCCCCCCC
Q 018318 195 -DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCH-IVTTTTHKS-L-RGPRAGMIFYRKGPKPPKKG 266 (358)
Q Consensus 195 -~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~----~~d-~~~~s~~K~-l-~g~~gG~i~~~~~~~~~~~~ 266 (358)
..-|++|+++|+++|+++|.|+. +-.+++++....++. .+- +.+++.+|- + +|+|-||++..+.---. +.
T Consensus 217 s~~HL~kiae~A~klgi~vIaDEV-Y~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf-~~ 294 (447)
T KOG0259|consen 217 SEDHLKKIAETAKKLGIMVIADEV-YGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVF-RD 294 (447)
T ss_pred cHHHHHHHHHHHHHhCCeEEehhh-cceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccc-cc
Confidence 23589999999999999999998 444455443333443 333 567889994 4 79999999998841000 00
Q ss_pred CCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCC-Ccce
Q 018318 267 QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGG-TENH 344 (358)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~-~~~~ 344 (358)
....+.+... .....+|..-..+|+-..|...-++-|.....-+..|++..++.|.++ ++...-.+ +.++
T Consensus 295 ------~~~~q~~~~~--~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~my 366 (447)
T KOG0259|consen 295 ------TKVVQGIKNF--LDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMY 366 (447)
T ss_pred ------hHHHHHHHHH--HhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceE
Confidence 0111222221 111223443344555444554433335777888999999999999997 78743333 4554
Q ss_pred EEEEEc
Q 018318 345 LVLWDL 350 (358)
Q Consensus 345 ~~~v~~ 350 (358)
.|+-+
T Consensus 367 -lmv~l 371 (447)
T KOG0259|consen 367 -LMVKL 371 (447)
T ss_pred -EEecc
Confidence 44443
No 259
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.65 E-value=2.4e-14 Score=123.37 Aligned_cols=256 Identities=16% Similarity=0.167 Sum_probs=163.7
Q ss_pred cceeEecc--CCCCCHHHHHHHhcccccCCCCCCCCCCCCC-C------chhHHHHHHHHHHHHHHhcCCCCCCCCcccc
Q 018318 32 RGIELIAS--ENFTSFAVIEALGSALTNKYSEGMPGNRYYG-G------NEFIDEIENLCRSRALQTFHLDPTQWGVNVQ 102 (358)
Q Consensus 32 ~~~~l~a~--~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~-~------~~~~~~le~~~~~~la~~~g~~~~~~~~~v~ 102 (358)
..|++++= -..++++.++|+. .|+.||.-.++.. | .+.+..+- +.+++++|++. +.
T Consensus 16 ~~iNv~PiQrGGiLt~eArkal~-----E~gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D~------~R 80 (382)
T COG1103 16 GFINVNPIQRGGILTEEARKALL-----EWGDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMDE------VR 80 (382)
T ss_pred CccccChhhccCcCCHHHHHHHH-----HhcCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCce------ee
Confidence 34555542 3457899998875 3555665544441 2 12233333 44999999985 66
Q ss_pred ccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc-
Q 018318 103 PYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF- 180 (358)
Q Consensus 103 ~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~- 180 (358)
++.|. +|-++++.+++++||-|++....| ++. + -.+...|.++..++- ....++.++++...+.|++.
T Consensus 81 ~t~GARe~KfavMhal~~~gd~vV~D~~aH---Ytt-y-----vAAEragl~v~eVp~-tg~Pey~i~~e~y~~viee~~ 150 (382)
T COG1103 81 VTAGAREAKFAVMHALCKEGDWVVVDSLAH---YTT-Y-----VAAERAGLNVAEVPN-TGYPEYKITPEGYAEVIEEVK 150 (382)
T ss_pred ecccchhhHHHHHHHhccCCCEEEEcCcch---HHH-H-----HHHHhcCCeEEecCC-CCCCceEecHHHHHHHHHHHH
Confidence 78886 599999999999999999988654 322 1 123556766555541 12235678998887777542
Q ss_pred -----CCcEEEEcCC--CCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCCC-CC
Q 018318 181 -----RPKLIICGGS--AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRG-PR 250 (358)
Q Consensus 181 -----~~~~v~~~~~--~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~g-~~ 250 (358)
.|.+.++.++ ++|...|.+.++++|+++|+++++.+|...|.+ +.+.. ++|++++|+||.|+. .+
T Consensus 151 ~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grm-----pvs~ke~g~DFiVgSGHKsmAAs~P 225 (382)
T COG1103 151 DEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRM-----PVSGKEIGADFIVGSGHKSMAASAP 225 (382)
T ss_pred hccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccc-----cccccccCCCEEEecCccchhccCC
Confidence 2455555543 577778999999999999999999999877754 22222 899999999999853 45
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHHhhh-h--cCCC---------CcCCCChhHHHHHHHHHHHhccHHHHHHHHHH
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINF-A--VFPS---------LQGGPHNHQIGALAVALKQASTPAFKAYAKQV 318 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~---------~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~ 318 (358)
.|++..+.+|. +.+-. + .++. ..|.|....||++-...+.. .++++-
T Consensus 226 iGvl~~~eE~a---------------e~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRV------krWdeE 284 (382)
T COG1103 226 IGVLAMSEEWA---------------EIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV------KRWDEE 284 (382)
T ss_pred eeEEeehhHHH---------------HHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHH------HHHHHH
Confidence 68888887542 22111 1 0111 12333344444443222211 234455
Q ss_pred HHHHHHHHHHHhhCC-ceeee
Q 018318 319 KANAVALGNYLTGKG-YSLVT 338 (358)
Q Consensus 319 ~~~~~~l~~~L~~~G-~~~~~ 338 (358)
.+++++|.+.|.++| ++-..
T Consensus 285 v~kaR~fv~elEkigg~~qlG 305 (382)
T COG1103 285 VEKARWFVAELEKIGGVKQLG 305 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHhC
Confidence 677999999999985 75544
No 260
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.64 E-value=4.5e-15 Score=147.59 Aligned_cols=219 Identities=13% Similarity=0.057 Sum_probs=150.1
Q ss_pred HHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
+.+.+|++||++.. .+.++|| .+|.+++.+++++||+|++...+|-|.+ + .+.+.|+. ++++.
T Consensus 200 Ae~~AA~~fgAd~t-----yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-h--------aLilsga~--PVYl~ 263 (714)
T PRK15400 200 AEEYIARVFNADRS-----YMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT-H--------LMMMSDVT--PIYFR 263 (714)
T ss_pred HHHHHHHHhCCCcE-----EEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH-H--------HHHHcCCe--EEEec
Confidence 44789999999983 4457775 5999999999999999999999887765 2 23456653 44432
Q ss_pred cC-CCC---CCCC-----HHHHHHHHhhcC----CcEEEEcC-CCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhcc
Q 018318 161 VN-SST---GYID-----YDKLEEKALDFR----PKLIICGG-SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQ 226 (358)
Q Consensus 161 ~~-~~~---~~id-----~~~l~~~l~~~~----~~~v~~~~-~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~ 226 (358)
-+ ++. +.++ ++.++++++++. |+.+++.. +..|...+++.|.++|+.++ +++|+||+..+...+
T Consensus 264 P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p 341 (714)
T PRK15400 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (714)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCc
Confidence 11 112 2345 899999997642 22455544 45678889999999999887 689999986554443
Q ss_pred ccC--CCCC-cc---c--EEEecCCccCCCCC-eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHH
Q 018318 227 EAA--NPFE-YC---H--IVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIG 297 (358)
Q Consensus 227 ~~~--~~~~-~~---d--~~~~s~~K~l~g~~-gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (358)
.++ ..+. ++ | +++.|.||.+++.. ++++..+.. + + .+++.....-..++||++..+|
T Consensus 342 ~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~----------v---d-~~~~n~a~~m~~STSPsY~l~A 407 (714)
T PRK15400 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD----------V---N-EETFNEAYMMHTTTSPHYGIVA 407 (714)
T ss_pred ccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC----------C---C-HHHHHHHHHHHcCCCcHHHHHH
Confidence 332 2232 55 5 99999999998764 455555332 1 1 1233333222334678999999
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 298 ALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 298 al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++-.|...+.........++..+.+..+|+.|.+.
T Consensus 408 SLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~ 442 (714)
T PRK15400 408 STETAAAMMKGNAGKRLINGSIERAIKFRKEIKRL 442 (714)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 99888877653345677788888889999988775
No 261
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=2.3e-14 Score=134.23 Aligned_cols=259 Identities=16% Similarity=0.092 Sum_probs=155.7
Q ss_pred ceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HH
Q 018318 33 GIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PA 109 (358)
Q Consensus 33 ~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a 109 (358)
.+.|..+++. +++.+++++.+.+.......|+. .....+ |+++++++|++++ .|++++|+ ++
T Consensus 20 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-------~g~~~l----r~~ia~~~~~~~~----~I~~t~G~~~~ 84 (337)
T PRK03967 20 RIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH-------ITSDPL----REAIAEFYGLDAE----NIAVGNGSDEL 84 (337)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC-------CCHHHH----HHHHHHHhCcCcc----eEEEcCCHHHH
Confidence 3555555543 47889998877663221122331 122334 4778889998774 35567775 57
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
+..++..+ +||+|++..|.|+.+.. ..+..|.. +++++.+ +++.+|++++++.+. +++++++++
T Consensus 85 l~~~~~~~--~gd~V~v~~P~y~~~~~---------~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~~~--~~~~v~~~~ 148 (337)
T PRK03967 85 ISYLVKLF--EGKHIVITPPTFGMYSF---------YAKLNGIP--VIDVPLK-EDFTIDGERIAEKAK--NASAVFICS 148 (337)
T ss_pred HHHHHHHh--CCCeEEEeCCChHHHHH---------HHHHcCCe--EEEeecC-CCCCcCHHHHHHhcc--CCCEEEEeC
Confidence 77666654 79999999998764321 12345654 4444444 346899999988753 578888888
Q ss_pred CCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccC--CCCCeeEEEEeCCCCCC
Q 018318 190 SAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPP 263 (358)
Q Consensus 190 ~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~ 263 (358)
++|| ...+.++|.++++ +++++|+|+++. .+.... ....++ .--+++.|++|.+ +|.|.|++++++
T Consensus 149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~-~~~~~~-~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~----- 220 (337)
T PRK03967 149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYA-EFSGKS-LIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE----- 220 (337)
T ss_pred CCCCCCCCCCHHHHHHHHh-cCCEEEEECchh-hhcccc-hHHHHhhCCCEEEEecchHhhcchhhhheeeecCH-----
Confidence 8887 4678899999995 799999999964 332111 100011 1237789999986 567889999876
Q ss_pred CCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcc
Q 018318 264 KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTEN 343 (358)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~ 343 (358)
++.+.+.....+. +.+.....++..++.. .+.+.+..++..++++.+.+.|.+.++ ++.+
T Consensus 221 ----------~~i~~~~~~~~~~---~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~-----~~~~ 280 (337)
T PRK03967 221 ----------EIIDALYRIKPPF---SLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYAY-----PSDA 280 (337)
T ss_pred ----------HHHHHHHhhcCCC---CCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCcC-----CCCC
Confidence 3555554432221 1222222222222221 112344555667777888888876422 2345
Q ss_pred eEEEEEc
Q 018318 344 HLVLWDL 350 (358)
Q Consensus 344 ~~~~v~~ 350 (358)
..+|+++
T Consensus 281 ~~~~~~~ 287 (337)
T PRK03967 281 NFLLLKL 287 (337)
T ss_pred cEEEEhH
Confidence 5577765
No 262
>PRK07505 hypothetical protein; Provisional
Probab=99.64 E-value=3.9e-14 Score=135.82 Aligned_cols=253 Identities=15% Similarity=0.117 Sum_probs=141.5
Q ss_pred ceeEeccCCCC----CHHHHHHHhcccccCCC-CCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh
Q 018318 33 GIELIASENFT----SFAVIEALGSALTNKYS-EGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (358)
Q Consensus 33 ~~~l~a~~~~~----~~~V~~a~~~~~~~~~~-~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt 107 (358)
.+.+. +.+++ +|+|.+|+.+.+.. ++ .+..+++.....+...++ +++++++++. . .+++++|+
T Consensus 48 ~ld~~-s~~~lgl~~~p~v~~A~~~~l~~-~g~~~~~~~~~~~~~~~~~~l----~~~la~~~~~-~-----~~~~~sG~ 115 (402)
T PRK07505 48 FVNFV-SCSYLGLDTHPAIIEGAVDALKR-TGSLHLSSSRTRVRSQILKDL----EEALSELFGA-S-----VLTFTSCS 115 (402)
T ss_pred EEEee-cCCccCCCCCHHHHHHHHHHHHH-hCCCCCCccchhhhhHHHHHH----HHHHHHHhCC-C-----EEEECChH
Confidence 34444 34555 89999999988753 32 121122111122333344 4889999987 3 26678999
Q ss_pred HHHHHHHHhhc----CCCC-eEEEec-CCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcC
Q 018318 108 PANFAAYTAVL----EPHD-RIMGLD-LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFR 181 (358)
Q Consensus 108 ~a~~~~l~a~~----~~gd-~Vl~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~ 181 (358)
+|+..++..+. .+|+ .|++.+ ..|++..... .+...+. .++.++ ..|++++++++++ +
T Consensus 116 ~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~-------~~~~~~~--~v~~~~------~~d~~~l~~~~~~-~ 179 (402)
T PRK07505 116 AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILK-------GICADET--EVETID------HNDLDALEDICKT-N 179 (402)
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhh-------hhhhcCC--eEEEeC------CCCHHHHHHHHhc-C
Confidence 99887775432 2233 244444 3344321000 1111222 334443 3589999998865 4
Q ss_pred CcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhh-ccc-cC---CC--CCcccEEEecCCccCCCCCee
Q 018318 182 PKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVA-AQE-AA---NP--FEYCHIVTTTTHKSLRGPRAG 252 (358)
Q Consensus 182 ~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~-~~~-~~---~~--~~~~d~~~~s~~K~l~g~~gG 252 (358)
+++++++.+++| ...++++|.++|++||+++|+|++|+.+..+ .+. .. .. .....+++.|++|.+++ .||
T Consensus 180 ~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~-~Gg 258 (402)
T PRK07505 180 KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGA-SGG 258 (402)
T ss_pred CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhc-cCe
Confidence 567766666655 5778999999999999999999998643221 111 00 11 11334778899999864 478
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCc-CCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQ-GGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNY 328 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (358)
++++.++ ++.+.+.....+.+. ++++....++..++++....+.+.+..+++.++.+.+.+.
T Consensus 259 ~~~~~~~--------------~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~ 321 (402)
T PRK07505 259 VIMLGDA--------------EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSL 321 (402)
T ss_pred EEEeCCH--------------HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHH
Confidence 8766443 455555443333322 3344445555555555433333344445555555555443
No 263
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.64 E-value=1.5e-14 Score=134.49 Aligned_cols=273 Identities=13% Similarity=0.036 Sum_probs=170.9
Q ss_pred ceeEeccCCCCCHHHHHHHhcccccCCCCC--CCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHH
Q 018318 33 GIELIASENFTSFAVIEALGSALTNKYSEG--MPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN 110 (358)
Q Consensus 33 ~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g--~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~ 110 (358)
.+++.|++..+|++|++++.+.+....+.| ..+..|+ +.++.+.+ +++.+.|+++++++.+.. +.+...+||.++
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHR-s~~F~~i~-~~~~~~Lr~Ll~~P~~y~-Vlfl~GggT~~~ 81 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHR-SSWFSSLL-AQAEADLRDLLGIPDEYG-VVFLQGGSSLQF 81 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccc-cHHHHHHH-HHHHHHHHHHhCCCCCCe-EEEEeccHHHHH
Confidence 568889999999999999998876544333 2233333 34565555 467899999999954221 334445578899
Q ss_pred HHHHHhhcCCCCeEE-EecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 111 FAAYTAVLEPHDRIM-GLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 111 ~~~l~a~~~~gd~Vl-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
.++..+++.+||+++ +.. .|.++..+. ..++..| .++.+...-..+ +..+++++++ +.+ ..+.|.++
T Consensus 82 ea~~~Nll~~g~~~~~~~~---tG~fg~r~~----~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~-d~~~v~~t 150 (364)
T PRK12462 82 SMIPMNFSRPGAAAPEYVT---TGYWSRKAI----GEASRVA-AMRVVWDGAASGYRTLPSLAELD--WDA-RAPFRHYV 150 (364)
T ss_pred HHHHHHcCCCCCcEEEEEe---CCHHHHHHH----HHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCC-CCcEEEEc
Confidence 999999999999765 333 244433211 1112233 333332111101 1345666652 221 45777666
Q ss_pred CCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeCCCCC-CC
Q 018318 189 GSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PK 264 (358)
Q Consensus 189 ~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~~~-~~ 264 (358)
+.+ +|...| ++.+.+++++|+|++..++. .+.+++..|++.++.+|+|+ |.| ++++.+++..+ ..
T Consensus 151 ~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s-----~pid~~~~dvi~agsQKnlg-P~Gltvvivs~~al~~~~ 219 (364)
T PRK12462 151 SNETVEGLQFP-----DAAGLPDSPLIADMSSDFMS-----RPFDVEAYGMVYAHAQKNLG-PAGVTVAIIRRALLERVP 219 (364)
T ss_pred cCCCCceEecC-----cccccCCCeEEEEcCchhhC-----CCCChHHccEEEeeccccCC-CCceEEEEECHHHHhhcc
Confidence 554 444443 33334699999999855432 22344566999999999996 888 77777775432 11
Q ss_pred CCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHhhCC-ce
Q 018318 265 KGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP--AFKAYAKQVKANAVALGNYLTGKG-YS 335 (358)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~G-~~ 335 (358)
+.-+ ...++....+... +..+|....+.++..+++.++++ +++.+.+++++.++.+++.+.+.. |-
T Consensus 220 ~~~p--~~ldy~~~~~~~s---~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~ 288 (364)
T PRK12462 220 DTLP--PMLDFRTHVEHRS---NYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVI 288 (364)
T ss_pred ccCC--chhhHHHHHhcCC---CCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 1111 1113433333321 22367888888899999988776 779999999999999999999874 53
No 264
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.63 E-value=1.7e-14 Score=134.70 Aligned_cols=218 Identities=19% Similarity=0.199 Sum_probs=138.9
Q ss_pred HHHHHHhcCCCCCCCCccccccCChH-HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc
Q 018318 83 RSRALQTFHLDPTQWGVNVQPYSGSP-ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (358)
Q Consensus 83 ~~~la~~~g~~~~~~~~~v~~~sGt~-a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 161 (358)
|+++++++|++++ .+++++|+. ++..+ ..++.+| +|++..|.|..+.. .+...|. +++.++
T Consensus 53 r~~la~~~~~~~~----~i~~t~G~~~~i~~~-~~~l~~g-~vl~~~p~y~~~~~---------~~~~~g~--~~~~~~- 114 (330)
T TIGR01140 53 RAAAAAYYGLPAA----SVLPVNGAQEAIYLL-PRLLAPG-RVLVLAPTYSEYAR---------AWRAAGH--EVVELP- 114 (330)
T ss_pred HHHHHHHhCCChh----hEEECCCHHHHHHHH-HHHhCCC-eEEEeCCCcHHHHH---------HHHHcCC--EEEEeC-
Confidence 4788899998753 366777765 65554 4446788 68888887765431 2234454 344431
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--c
Q 018318 162 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--Y 234 (358)
Q Consensus 162 ~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~ 234 (358)
|++.++++++ ++++|+++.++|| ...+ +++|+++|+++|+++|+|+++. ++..........+ +
T Consensus 115 -------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~ 184 (330)
T TIGR01140 115 -------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFI-DFTPDASLAPQAARFP 184 (330)
T ss_pred -------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc-ccCCccchhhHhccCC
Confidence 7899999884 4677877777776 3455 6778888999999999999964 3332211110011 3
Q ss_pred ccEEEecCCccCC--CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH-
Q 018318 235 CHIVTTTTHKSLR--GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF- 311 (358)
Q Consensus 235 ~d~~~~s~~K~l~--g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~- 311 (358)
.++++.|++|+++ |.+.|++++++ ++.+.+....... +.+.. +..++...+...++
T Consensus 185 ~~i~~~S~SK~~g~~G~R~G~i~~~~---------------~~~~~l~~~~~~~---~~s~~---~q~~~~~~l~~~~~~ 243 (330)
T TIGR01140 185 GLVVLRSLTKFFGLAGLRLGFVVAHP---------------ALLARLREALGPW---TVNGP---ARAAGRAALADTAWQ 243 (330)
T ss_pred CEEEEEecchhhcCchhhhhheeCCH---------------HHHHHHHhcCCCC---CchHH---HHHHHHHHHhchHHH
Confidence 4589999999874 44559999877 3445454332111 11212 22333333333344
Q ss_pred HHHHHHHHHHHHHHHHHHhhCC-ceeeeCCCcceEEEEEcC
Q 018318 312 KAYAKQVKANAVALGNYLTGKG-YSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 312 ~~~~~~~~~~~~~l~~~L~~~G-~~~~~~~~~~~~~~v~~~ 351 (358)
+..++++.++++++.+.|++.+ +++.+ ..+..+|+++.
T Consensus 244 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~f~~~~~~ 282 (330)
T TIGR01140 244 AATRARLAAERARLAALLARLGGLEVVG--GTALFLLVRTP 282 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceECC--CCCeEEEEEcC
Confidence 5667888999999999999987 66543 45667888864
No 265
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.63 E-value=2.5e-14 Score=139.24 Aligned_cols=204 Identities=16% Similarity=0.137 Sum_probs=125.5
Q ss_pred ceeEeccC-CCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCC--CCC-CCCccccccCC-h
Q 018318 33 GIELIASE-NFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL--DPT-QWGVNVQPYSG-S 107 (358)
Q Consensus 33 ~~~l~a~~-~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~--~~~-~~~~~v~~~sG-t 107 (358)
.+.+..++ +..++..++++...+.. ..|+.. .++.+ ..|+.+++.+++.++. .++ ++ .|+.++| +
T Consensus 96 ~i~l~~g~p~~~~~~~~~~~~~~~~~---~~Y~~p--~g~~~---~~e~iv~~y~~~~~~~~~~~~~~~--~V~it~Gat 165 (521)
T TIGR03801 96 IISYVIDQLGFDPDAFLYEMCDGIIG---DNYPVP--DRMLP---HSEKIVHQYLIQEMCGNKPPPGEF--DLFAVEGGT 165 (521)
T ss_pred HHhhcCCCCCCCCCHHHHHHHHHhhc---CCCCCC--CCCHH---HHHHHHHHHHHhhccCCCCCCCcC--eEEEeCCHH
Confidence 35555443 34455666666655421 124321 11222 3333344555554432 221 11 3555655 5
Q ss_pred HHHHHHHHh-----hcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-C-----CCCCHHHHHHH
Q 018318 108 PANFAAYTA-----VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-T-----GYIDYDKLEEK 176 (358)
Q Consensus 108 ~a~~~~l~a-----~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~-----~~id~~~l~~~ 176 (358)
+|+..++.+ +++|||+|++..|.|..+.. .+.+.+.++.+++++.+.. + +.+|+++++++
T Consensus 166 ~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~---------~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 166 AAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE---------IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred HHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH---------HHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence 688888776 68999999999998875432 1234433445555554321 2 67999999987
Q ss_pred HhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHh--CCEEEEechhhhhhhhccccCCCCC---cccEEEecCCccC
Q 018318 177 ALDFRPKLIICGGSAYPR--DW---DYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE---YCHIVTTTTHKSL 246 (358)
Q Consensus 177 l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~--g~~lvvD~a~~~g~~~~~~~~~~~~---~~d~~~~s~~K~l 246 (358)
+. .++|+|++++|+||+ .. .+++|+++|++| ++++|+|++++ .+.. .....+. .--+++.|++|.+
T Consensus 237 ~~-~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~--~~~sl~~~~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 237 RD-PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG-TFVD--DFRSLFAELPYNTIGVYSFSKYF 312 (521)
T ss_pred cC-CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch-hhcc--cccchhhhCCCCEEEEEcchhhc
Confidence 65 478999888888883 33 478889999987 99999999954 3332 1111112 2347889999986
Q ss_pred --CCCCeeEEEEeCC
Q 018318 247 --RGPRAGMIFYRKG 259 (358)
Q Consensus 247 --~g~~gG~i~~~~~ 259 (358)
+|+|-|+++.+++
T Consensus 313 g~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 313 GATGWRLGTIALHKD 327 (521)
T ss_pred cCchhhhhhhhcCch
Confidence 6888899998754
No 266
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.63 E-value=1.7e-14 Score=143.60 Aligned_cols=218 Identities=15% Similarity=0.059 Sum_probs=149.0
Q ss_pred HHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
+.+.+|++||++.. .+.++|| .+|.+++.++++|||+|++...+|-|.+ + .+.+.|+. ++++.
T Consensus 200 Ae~~aA~~fgAd~t-----yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-~--------aLilsga~--PVYl~ 263 (713)
T PRK15399 200 AEEYIARTFGAEQS-----YIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA-H--------LLMMSDVV--PIWLK 263 (713)
T ss_pred HHHHHHHHhCCCcE-----EEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH-H--------HHHHcCCe--eEEec
Confidence 34788999999973 4457775 5999999999999999999999887765 2 23456653 44432
Q ss_pred cC-CCC---CCCCH-----HHHHHHHhhc----CCcEEEEcCCC-CCCccchHHHHHHHHHhCCEE-EEechhhhhhhhc
Q 018318 161 VN-SST---GYIDY-----DKLEEKALDF----RPKLIICGGSA-YPRDWDYARFRAVADKCGALL-LCDMAHISGLVAA 225 (358)
Q Consensus 161 ~~-~~~---~~id~-----~~l~~~l~~~----~~~~v~~~~~~-~~~~~~l~~i~~la~~~g~~l-vvD~a~~~g~~~~ 225 (358)
-+ ++. +.+++ +.++++++++ +|+.+++..++ .|...+++.|.++| |+.+ ++|+||+..+.+.
T Consensus 264 P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~ 340 (713)
T PRK15399 264 PTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFH 340 (713)
T ss_pred ccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcC
Confidence 11 122 24555 8999999764 23566665554 67888999999999 6766 6999998654433
Q ss_pred cccC--CCCC---cccEE---EecCCccCCCCC-eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHH
Q 018318 226 QEAA--NPFE---YCHIV---TTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (358)
Q Consensus 226 ~~~~--~~~~---~~d~~---~~s~~K~l~g~~-gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (358)
+.++ ..+. ++|.+ +.|.||.+++.. ++++..+... + .++++....-..++||++..+
T Consensus 341 p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v-------------d-~~~~n~a~~m~~STSPsY~Lm 406 (713)
T PRK15399 341 PIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY-------------D-EETFNEAFMMHTSTSPSYPIV 406 (713)
T ss_pred cccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC-------------C-HHHHHHHHHHHcCCCcHHHHH
Confidence 3222 1221 46766 999999998864 4677665421 1 133333322233567899999
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 297 ~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
|++-.+...+.........++..+.+..+|+.|.+.
T Consensus 407 ASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~ 442 (713)
T PRK15399 407 ASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRL 442 (713)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 999888877653345677788888889999988775
No 267
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=9e-14 Score=130.04 Aligned_cols=258 Identities=15% Similarity=0.111 Sum_probs=156.4
Q ss_pred cceeEeccCCC--CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC---CCCCCCCccccccCC
Q 018318 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH---LDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~~~--~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g---~~~~~~~~~v~~~sG 106 (358)
..+.|..+++. +|+.+++++.+.+.......|+. .....|. +.++++++ ++++ .|+.++|
T Consensus 20 ~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~-------~~~~~Lr----~aia~~~~~~~~~~~----~i~it~G 84 (335)
T PRK14808 20 DRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYD-------SPDEELI----EKILSYLDTDFLSKN----NVSVGNG 84 (335)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CChHHHH----HHHHHHhCCCCCCcc----eEEEcCC
Confidence 45777777654 47899999877653211011221 1223443 56777776 5553 3556777
Q ss_pred h-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEE
Q 018318 107 S-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI 185 (358)
Q Consensus 107 t-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v 185 (358)
+ +++..++.++ |.|++..|+|..+.. .++..|.++. .++.+. ++.++.+. +. +++++
T Consensus 85 a~~~i~~~~~~~----d~v~v~~P~y~~~~~---------~~~~~g~~~~--~v~~~~-~~~~~~~~----~~--~~~~i 142 (335)
T PRK14808 85 ADEIIYVMMLMF----DRSVFFPPTYSCYRI---------FAKAVGAKFL--EVPLTK-DLRIPEVN----VG--EGDVV 142 (335)
T ss_pred HHHHHHHHHHHh----CcEEECCCCHHHHHH---------HHHHcCCeEE--EecCCC-cCCCChhH----cc--CCCEE
Confidence 5 5888888776 779999988765431 2345676544 444442 34454322 22 46888
Q ss_pred EEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCC--CCCeeEEEEeCC
Q 018318 186 ICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLR--GPRAGMIFYRKG 259 (358)
Q Consensus 186 ~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~--g~~gG~i~~~~~ 259 (358)
++++++|| ...+.+++.+++ ++++++|+|+++. .+.. ......+. .--+++.|++|+++ |.|.|++++++
T Consensus 143 ~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~-~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~- 218 (335)
T PRK14808 143 FIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYY-EFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE- 218 (335)
T ss_pred EEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchh-hhcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCH-
Confidence 88989987 466888998888 5899999999953 3321 11111111 12377899999864 77889999987
Q ss_pred CCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeC
Q 018318 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG 339 (358)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~ 339 (358)
++.+.+.....+. +.+.....+..+++.. .+.+.+..++..++++++.+.|++.|+++..
T Consensus 219 --------------~~~~~l~~~~~~~---~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~- 278 (335)
T PRK14808 219 --------------KFIDAYNRVRLPF---NVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITD- 278 (335)
T ss_pred --------------HHHHHHHHhcCCC---CCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECC-
Confidence 3555554433221 1222222222333331 1223555667778888999999999988764
Q ss_pred CCcceEEEEEcC
Q 018318 340 GTENHLVLWDLR 351 (358)
Q Consensus 340 ~~~~~~~~v~~~ 351 (358)
+ .+..+|+.+.
T Consensus 279 ~-~g~f~~~~l~ 289 (335)
T PRK14808 279 S-RGNFVFIFME 289 (335)
T ss_pred C-CCeEEEEeCC
Confidence 3 4556788764
No 268
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.61 E-value=4.1e-14 Score=137.92 Aligned_cols=147 Identities=14% Similarity=0.133 Sum_probs=104.4
Q ss_pred cccccCC-hHHHHHHHHh-----hcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHH
Q 018318 100 NVQPYSG-SPANFAAYTA-----VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDK 172 (358)
Q Consensus 100 ~v~~~sG-t~a~~~~l~a-----~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~ 172 (358)
.|+.++| ++|+..++.+ +++|||+|+++.|.|..+.. .+.+.|.++++++++.+++ ++.+|+++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~---------~~~l~g~~~~~v~v~~~~~~~f~~d~~~ 233 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLE---------IPELPRYDLEVVHINADEENEWQYPDSE 233 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHH---------HHHHcCCCeEEEEeecCcccCCCCCHHH
Confidence 3555666 5688888876 68999999999998876432 2234555556666665433 47899999
Q ss_pred HHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHH--hCCEEEEechhhhhhhhccccCCCCC---cccEEEecC
Q 018318 173 LEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPFE---YCHIVTTTT 242 (358)
Q Consensus 173 l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~--~g~~lvvD~a~~~g~~~~~~~~~~~~---~~d~~~~s~ 242 (358)
+++++. .++|+|++++|+||+ .. .+++|+++|++ +|+++|+|+++. .+.. .....+. .--+++.|+
T Consensus 234 l~~~~~-~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~--~~~s~~~~~~~~~I~v~Sf 309 (527)
T PRK09275 234 LEKLRD-PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG-TFVD--DFRSLFAVLPYNTILVYSF 309 (527)
T ss_pred HHhhcC-CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh-hhcc--cccCHHHhCCCCEEEEeeh
Confidence 999875 478999988888883 33 47888999964 599999999953 3332 1111111 234888999
Q ss_pred CccC--CCCCeeEEEEeCC
Q 018318 243 HKSL--RGPRAGMIFYRKG 259 (358)
Q Consensus 243 ~K~l--~g~~gG~i~~~~~ 259 (358)
+|.+ +|+|.|+++++++
T Consensus 310 SK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 310 SKYFGATGWRLGVIALHED 328 (527)
T ss_pred hhhccCcHhHHhhhhcCch
Confidence 9986 6888899998774
No 269
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.61 E-value=5.2e-14 Score=131.52 Aligned_cols=220 Identities=15% Similarity=0.069 Sum_probs=136.2
Q ss_pred HHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc
Q 018318 83 RSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (358)
Q Consensus 83 ~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 161 (358)
++.+++++|.+.. .|+.++|+ +++..++. +++||+ |+++.|.|..+. ..++..|+.+..+++
T Consensus 46 r~~ia~~~~~~~~----~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~---------~~~~~~G~~v~~vp~-- 108 (332)
T PRK06425 46 EDQIKIYTQGLKI----KVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYK---------GYAFTHGIRISALPF-- 108 (332)
T ss_pred HHHHHHHhCCCcc----eEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHH---------HHHHHcCCeEEEEeC--
Confidence 4789999999874 36567776 58877775 567764 666688776433 123456765444443
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C
Q 018318 162 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E 233 (358)
Q Consensus 162 ~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~ 233 (358)
+ ...+|.+.++ +.++++|++++|+||+ .. .+++|.++|+++|+++|+|++ +..+.+.+ .+... .
T Consensus 109 ~--~~~~~~~~l~----~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~-Y~~~~~~~-~~~~~~~~~ 180 (332)
T PRK06425 109 N--LINNNPEILN----NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEA-FIDFVPNR-AEEDVLLNR 180 (332)
T ss_pred C--cccCcHHHHh----hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecc-hhcccccc-chhHHHHhc
Confidence 3 2345655443 3478999888888873 33 467888889999999999998 44443321 11111 1
Q ss_pred --cccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH
Q 018318 234 --YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP 309 (358)
Q Consensus 234 --~~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~ 309 (358)
.--+++.|++|.+ +|.|.|++++++ ++.+.+.....+.. .+ .++ . .++......
T Consensus 181 ~~~~vi~~~SfSK~~~l~GlRiGy~v~~~---------------~li~~l~~~~~~~~---~~--~~~-~-~~l~~~~~~ 238 (332)
T PRK06425 181 SYGNVIIGRSLTKILGIPSLRIGYIATDD---------------YNMKISRKITEPWS---VC--DPA-I-DFIRSIDLD 238 (332)
T ss_pred cCCCEEEEeecHHhcCCchhhheeeecCH---------------HHHHHHHHcCCCCc---cC--HHH-H-HHHHHhhhH
Confidence 1237789999975 577889999987 45555554322211 11 111 1 112211111
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEc
Q 018318 310 A-FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDL 350 (358)
Q Consensus 310 ~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~ 350 (358)
. .++.++...+.++++.+.|++.|+++..++ .+..+|+.+
T Consensus 239 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~-~g~f~~~~~ 279 (332)
T PRK06425 239 YVAKHSLDIMENERSYLINNLEAMGFRAAGDP-SANFITFMI 279 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC-CceEEEEEc
Confidence 2 245577788889999999999998876423 445578775
No 270
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.58 E-value=5e-14 Score=135.03 Aligned_cols=228 Identities=21% Similarity=0.216 Sum_probs=152.5
Q ss_pred HHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
+.+..|+.||++.. .+..+|| .||..++.+++.+||.|++..++|-++. ++ +-++|+ .++++.
T Consensus 75 Aqe~aA~~fgAd~t-----yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~-~g--------lilaGa--~Pvyl~ 138 (557)
T COG1982 75 AQELAARVFGADHT-----YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIH-HG--------LILAGA--TPVYLE 138 (557)
T ss_pred HHHHHHHHhCCCce-----EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHH-HH--------HHHcCC--ceEEec
Confidence 34889999999984 4456776 5999999999999999999999988764 22 334554 344332
Q ss_pred c--CCC---CCCCCHHHHHHHHhhcC-C-cEEEEcC-CCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCC-
Q 018318 161 V--NSS---TGYIDYDKLEEKALDFR-P-KLIICGG-SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANP- 231 (358)
Q Consensus 161 ~--~~~---~~~id~~~l~~~l~~~~-~-~~v~~~~-~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~- 231 (358)
- ++. -+.++.+.+++.+.++. . |++++.. +-.|...++++|.+.++.+++++.+|++|.......+..+..
T Consensus 139 p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~ 218 (557)
T COG1982 139 PSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESA 218 (557)
T ss_pred CCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchh
Confidence 1 211 14799999999887654 2 5555544 457888899999999999999999999987655444433332
Q ss_pred CC-cccEEEecCCccCCCC-CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH
Q 018318 232 FE-YCHIVTTTTHKSLRGP-RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP 309 (358)
Q Consensus 232 ~~-~~d~~~~s~~K~l~g~-~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~ 309 (358)
.+ ++|+++.|.||.+++. ++.++..++. ..+ -.+++.....-...++|++..+|++-+|-.....
T Consensus 219 ~~~~~~~~tqS~HK~l~alSQaS~iHv~~~--------~~~----~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~- 285 (557)
T COG1982 219 LNGGADFVTQSTHKLLAALSQASMIHVKDG--------RAV----NHERFNEALMMHQSTSPSYPLMASLDVARMQEGN- 285 (557)
T ss_pred hhcCceEEEechhhhhhhhhhhHHHhhCCC--------ccC----CHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhh-
Confidence 22 8899999999998765 4466666641 011 1233443322233567899999998875444332
Q ss_pred HHHHH----HHHHHHHHHHHHHHHhhC-Cceeee
Q 018318 310 AFKAY----AKQVKANAVALGNYLTGK-GYSLVT 338 (358)
Q Consensus 310 ~~~~~----~~~~~~~~~~l~~~L~~~-G~~~~~ 338 (358)
...+. +++..+.++.+++..... +|+++.
T Consensus 286 ~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~ 319 (557)
T COG1982 286 AGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQ 319 (557)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc
Confidence 22233 455556666666666555 577765
No 271
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.58 E-value=3.6e-13 Score=129.17 Aligned_cols=248 Identities=12% Similarity=-0.003 Sum_probs=145.5
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~---- 119 (358)
+|.|.+++.+.+.. +..+.+. + ..+...++| ++++++++.+. .++++||++|++.++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~~~~~~~--~--~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAGR-LTLTSRA--F--RNDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHhh-ccccccc--c--CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 79999999888753 2222111 1 124455666 77888888754 47789999999999988742
Q ss_pred -----CC-CeEEEecCCCCccccccccccCCccc-cc-cc-ceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 018318 120 -----PH-DRIMGLDLPSGGHLTHGYYTSGGKKI-SA-TS-IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS 190 (358)
Q Consensus 120 -----~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~-~~-~g-~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~ 190 (358)
+| ++|++....+.+...... ...+... +. .+ ....+..+ ...|++++++++.+ ++++|+++++
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~d~~~le~~i~~-~~~aii~e~~ 196 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTLSIV-GFSTDPDARGGFGPFTPGFRVV------PFGDAEALEAAITP-NTVAFLVEPI 196 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccHHHH-hccCCccccccCCCCCCCeEEe------CCCCHHHHHHHhCC-CeEEEEEccc
Confidence 23 678877755433210000 0000000 00 00 00001111 13689999999864 7889988876
Q ss_pred CCC--Cccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc-CC-CCC-cccEEEecCCccCCC--CCeeEEEEeCC
Q 018318 191 AYP--RDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-AN-PFE-YCHIVTTTTHKSLRG--PRAGMIFYRKG 259 (358)
Q Consensus 191 ~~~--~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-~~-~~~-~~d~~~~s~~K~l~g--~~gG~i~~~~~ 259 (358)
.++ ...| +++|.++|++||+++|+|++|. |+...+.. .. ..+ ..|+++++ |+|.| .+.|+++++++
T Consensus 197 ~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~ 273 (401)
T PRK00854 197 QGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSE 273 (401)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHH
Confidence 554 3333 9999999999999999999986 54332211 01 112 46887764 99854 35788888774
Q ss_pred CCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCce
Q 018318 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYS 335 (358)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~ 335 (358)
+.+.+.......+.+ .+....++..++++.+.. ....++.+++.+++.+.|++.+..
T Consensus 274 ---------------~~~~l~~~~~~~t~~-~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~ 330 (401)
T PRK00854 274 ---------------VLGVLKPGQHGSTFG-GNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIRSN 330 (401)
T ss_pred ---------------HHhcccCCCCCCCCC-cCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhccC
Confidence 333333211111122 233344444555654422 235677888889999999887643
No 272
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.58 E-value=2.5e-13 Score=124.41 Aligned_cols=247 Identities=20% Similarity=0.246 Sum_probs=155.7
Q ss_pred HHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh----cCC----CCeEEEecCCCCccccccccccCCccccccc
Q 018318 80 NLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV----LEP----HDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (358)
Q Consensus 80 ~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~----~~~----gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g 151 (358)
.+..+||+++.|.+. +.+.+.+|+++-.+.+.++ -.. .+.|++++..||.+++ .+.+.|
T Consensus 112 ~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA---------SAam~G 178 (496)
T COG1003 112 YELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA---------SAAMAG 178 (496)
T ss_pred HHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh---------hHhhcC
Confidence 345599999999987 5688888887655555443 122 3578899988886552 234556
Q ss_pred ceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechhhhhhhhccccC
Q 018318 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~ 229 (358)
. +++.++.+ ++|.+|+|+|++++.+ ++.++++.+|++. ...++.+|+++.|++|..|..|.|..-++++ ..
T Consensus 179 ~--~VV~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG---~~ 251 (496)
T COG1003 179 F--KVVVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG---LA 251 (496)
T ss_pred c--eEEEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhc---cc
Confidence 4 55666655 5899999999999985 6777777777654 4568999999999999999999997655543 22
Q ss_pred CCCC-cccEEEecCCccCCCCC------eeEEEEeCCCCCCCCC-------CCCCccccHHHHhhhhcCCCCcCCCChhH
Q 018318 230 NPFE-YCHIVTTTTHKSLRGPR------AGMIFYRKGPKPPKKG-------QPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (358)
Q Consensus 230 ~~~~-~~d~~~~s~~K~l~g~~------gG~i~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (358)
.|-+ |+|++-..+||+|..|. .|-+.++..+...-+. +.....+.....+... ....|+..
T Consensus 252 rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~--~a~~Gs~~--- 326 (496)
T COG1003 252 RPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVS--AAPYGSAS--- 326 (496)
T ss_pred cccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceee--ccccCcch---
Confidence 3445 89999999999995443 2566666543321111 0000000000000000 01112222
Q ss_pred HHHHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCC--cceEEEEEcCC
Q 018318 296 IGALAVAL-KQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGT--ENHLVLWDLRP 352 (358)
Q Consensus 296 ~~al~~al-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~--~~~~~~v~~~~ 352 (358)
+.-.+.++ +.+..+++.+..+...-|++|+.++|+. .+++.-.+. ..|-+.+|.++
T Consensus 327 il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~ 385 (496)
T COG1003 327 ILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARP 385 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechH
Confidence 11111222 2223356777778888899999999987 455522222 57889999884
No 273
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.56 E-value=7.3e-13 Score=127.65 Aligned_cols=243 Identities=13% Similarity=0.063 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHhcCC--CCCCCCccccccCCh-HHHHHHHHhhcC-----CCCeEEE-ecCCCCccccccccccCCccc
Q 018318 77 EIENLCRSRALQTFHL--DPTQWGVNVQPYSGS-PANFAAYTAVLE-----PHDRIMG-LDLPSGGHLTHGYYTSGGKKI 147 (358)
Q Consensus 77 ~le~~~~~~la~~~g~--~~~~~~~~v~~~sGt-~a~~~~l~a~~~-----~gd~Vl~-~~~~~~~~~~~~~~~~~~~~~ 147 (358)
.|.+.+.+++++.+|. +++ .|+.++|+ +|+..++.++++ +||.|++ ..|+|+++...... . .
T Consensus 78 ~LR~aia~~~~~~~g~~v~~~----~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~--~--~- 148 (416)
T PRK09440 78 ELIEALAALLNERYGWNISPQ----NIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE--E--D- 148 (416)
T ss_pred HHHHHHHHHHHHHhCCCCChh----hEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc--c--C-
Confidence 4555556777766664 433 35567775 588888888874 6899999 68888765421100 0 0
Q ss_pred ccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhh
Q 018318 148 SATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGL 222 (358)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~ 222 (358)
...+....+++++.+...+.+|+++++ +. .+++++++++++||+ .. .+++|.++|++||+++|+|+++...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~- 224 (416)
T PRK09440 149 LFVSYRPNIELLPEGQFKYHVDFEHLH--ID-EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP- 224 (416)
T ss_pred ceeecccccccccccccccCCCHHHcc--cC-CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-
Confidence 011111122223211002468999987 33 367888888888873 33 4789999999999999999996421
Q ss_pred hhccccCC--C-CCcccEEEecCCcc-CCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHH
Q 018318 223 VAAQEAAN--P-FEYCHIVTTTTHKS-LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGA 298 (358)
Q Consensus 223 ~~~~~~~~--~-~~~~d~~~~s~~K~-l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 298 (358)
........ + ...--+++.|++|+ ++|.|.|++++++ ++.+.+......... +++.....+
T Consensus 225 ~~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~~---------------~l~~~~~~~~~~~~~-~~s~~~q~~ 288 (416)
T PRK09440 225 FPGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIADE---------------EIIEALSNMNGIISL-APGRLGPAI 288 (416)
T ss_pred CCCcchhhcCccccCCeEEEecccccCCCcceEEEEeCCH---------------HHHHHHHHHHHHhcc-CCCcHHHHH
Confidence 10000000 0 01123778999996 4677889999877 344444432211111 122222222
Q ss_pred HHHHHHHhccHHHH----H-HHHHHHHHHHHHHHHHhh----CCceeeeCCCcceEEEEEcCC
Q 018318 299 LAVALKQASTPAFK----A-YAKQVKANAVALGNYLTG----KGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 299 l~~al~~~~~~~~~----~-~~~~~~~~~~~l~~~L~~----~G~~~~~~~~~~~~~~v~~~~ 352 (358)
+..++. ..++. + ..+..+++++.+++.|.+ .++++.. +..+..+|+++..
T Consensus 289 ~~~~l~---~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~-p~gg~fiw~~~~~ 347 (416)
T PRK09440 289 AAEMIE---SGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHK-PEGAIFLWLWFKD 347 (416)
T ss_pred HHHHhc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEec-CCCceEEEEECCC
Confidence 222222 11221 1 233344455556666654 3555543 4568889999865
No 274
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.56 E-value=4.5e-13 Score=127.47 Aligned_cols=273 Identities=16% Similarity=0.110 Sum_probs=155.3
Q ss_pred cceeEecc--CCCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+.+..+ ++++ +|.|.+++.+.+.... ..+..+ ..+...+|| +++++++|.+. .+.+.+|
T Consensus 28 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~--~~~~~~~l~----~~la~~~g~~~-----~~~~~sg 93 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV---HVSNLY--YTEPQEELA----EKLVEHSGADR-----VFFCNSG 93 (379)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc---cccccc--CCHHHHHHH----HHHHhhCCCCE-----EEEeCCc
Confidence 34555443 4433 5899999888775321 111112 224455565 78999999764 3667788
Q ss_pred hHHHHHHHHhh---cC----CCCeEEEecCCCCccccccccccCCcccccccceeEE--eecccCCCC---CCCCHHHHH
Q 018318 107 SPANFAAYTAV---LE----PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFES--LPYKVNSST---GYIDYDKLE 174 (358)
Q Consensus 107 t~a~~~~l~a~---~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~---~~id~~~l~ 174 (358)
++|+..++..+ .. +||+|+++.+.|.++.... ...+..... ...++..+. ...|+++++
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 164 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGA---------LSATGQPKYQKGFEPLVPGFSYAPYNDIESLK 164 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHH---------HHhcCChhhhccCCCCCCCceeeCCCCHHHHH
Confidence 99999888755 22 3799999988765432111 011110000 001111000 123899999
Q ss_pred HHHhhcCCcEEEEcCCCCC--Cc----cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCC---CC-cccEEEecCCc
Q 018318 175 EKALDFRPKLIICGGSAYP--RD----WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FE-YCHIVTTTTHK 244 (358)
Q Consensus 175 ~~l~~~~~~~v~~~~~~~~--~~----~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~---~~-~~d~~~~s~~K 244 (358)
+.+.+ ++++|+++.++++ .. .++++|.++|++||+++++|++|. |+...+. ..+ .. ..|++ +++|
T Consensus 165 ~~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~-~~~~~~~~~~~d~~--t~sK 239 (379)
T TIGR00707 165 KAIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGK-FFAYEHYGIEPDII--TLAK 239 (379)
T ss_pred HHhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccch-hhhHHhcCCCCCEE--EEcc
Confidence 99865 6788887644332 11 247899999999999999999975 4433221 111 12 34654 5789
Q ss_pred cCC-CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 018318 245 SLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAV 323 (358)
Q Consensus 245 ~l~-g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 323 (358)
+++ |.+.|+++.+++ +.+.+.........+ .+....++..++++.+.. ..+.++++++++
T Consensus 240 ~~~~G~riG~~~~~~~---------------~~~~~~~~~~~~~~~-~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~ 300 (379)
T TIGR00707 240 GLGGGVPIGATLAKEE---------------VAEAFTPGDHGSTFG-GNPLACAAALAVLEVIEK---ERLLENVKEKGD 300 (379)
T ss_pred cccCCcccEEEEEcHH---------------HHhhhcCCCCCCCCC-CCHHHHHHHHHHHHHHHh---hhHHHHHHHHHH
Confidence 985 456799888763 444443321111112 233444555556655422 345677778888
Q ss_pred HHHHHHhhCCceee-e-CCCcceEEEEEcC
Q 018318 324 ALGNYLTGKGYSLV-T-GGTENHLVLWDLR 351 (358)
Q Consensus 324 ~l~~~L~~~G~~~~-~-~~~~~~~~~v~~~ 351 (358)
++++.|.+.+.+.. . -...+..+|+.+.
T Consensus 301 ~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~ 330 (379)
T TIGR00707 301 YFKERLEELGKNYPNKEVRGKGLMLGIELE 330 (379)
T ss_pred HHHHHHHHHHhhCCCCccccCceEEEEEec
Confidence 88888876543321 1 0124556777653
No 275
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.55 E-value=5.3e-13 Score=124.60 Aligned_cols=214 Identities=15% Similarity=0.096 Sum_probs=131.2
Q ss_pred HHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeeccc
Q 018318 83 RSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (358)
Q Consensus 83 ~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 161 (358)
++.+++++|.+. |+.++|+ +|+..++ .+.|||+|++..|.|..+.. .++..|+. ++.++
T Consensus 55 r~~ia~~~~~~~------I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~---------~~~~~g~~--~~~v~- 114 (330)
T PRK05664 55 EAAARAYYGAPQ------LLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAH---------AWRRAGHQ--VRELD- 114 (330)
T ss_pred HHHHHHHhCCCC------EEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHH---------HHHHcCCe--EEEec-
Confidence 477888888643 5567776 4776654 35899999999998765431 23455654 34333
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCC--cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCc--
Q 018318 162 NSSTGYIDYDKLEEKALDFRPKLIICGGSAYPR--DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEY-- 234 (358)
Q Consensus 162 ~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~--~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~-- 234 (358)
+++++++++ +++++++++|+||+ .. .+++|.++|+++|+++|+|+++. ........ ..+..
T Consensus 115 --------~~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~-~~~~~~s~-~~~~~~~ 182 (330)
T PRK05664 115 --------EAEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSL-AACAHRP 182 (330)
T ss_pred --------hhhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcc-cCCCcccc-cccccCC
Confidence 234556553 57788888888873 33 46677778899999999999853 32211100 11121
Q ss_pred ccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHH
Q 018318 235 CHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (358)
Q Consensus 235 ~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~ 312 (358)
--+++.|++|.+ +|.|.|++++++ ++.+.+.....+.. .+.....+...++.. ....+
T Consensus 183 ~vi~~~SfSK~~gl~GlRiG~~v~~~---------------~l~~~~~~~~~~~~---~~~~~~~~~~~~L~~--~~~~~ 242 (330)
T PRK05664 183 GLIVLRSFGKFFGLAGARLGFVLAEP---------------ALLRALAELLGPWT---VSGPTRWLAQAALAD--TPWQR 242 (330)
T ss_pred CEEEEeeccccccCCCcceEEEEeCH---------------HHHHHHHHhcCCCC---CCHHHHHHHHHHHhC--hHHHH
Confidence 127899999986 577889999977 45555544322211 121222222333332 12235
Q ss_pred HHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEc
Q 018318 313 AYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDL 350 (358)
Q Consensus 313 ~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~ 350 (358)
..++++.++++++.+.|++.|++.. ++....+|+..
T Consensus 243 ~~~~~~~~~r~~l~~~L~~~~~~~~--~~~~~f~~~~~ 278 (330)
T PRK05664 243 RQRERLLAASQRLAALLRRHGLTPA--GGCALFQWVRT 278 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccc--CCcceEEEEec
Confidence 5677788889999999999887643 22334567654
No 276
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.55 E-value=5.6e-13 Score=128.25 Aligned_cols=279 Identities=18% Similarity=0.103 Sum_probs=157.6
Q ss_pred cceeEeccCC--C---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASEN--F---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~~--~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+.+..+.+ . .+|.|.+++.+.+... ..++.. + ...+...++ .+.++++++.+.+ ..++++||
T Consensus 37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~-~-~~~~~~~~l----~~~l~~~~~~~~~---~v~~~~sg 105 (413)
T cd00610 37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL--THFSLG-F-FYNEPAVEL----AELLLALTPEGLD---KVFFVNSG 105 (413)
T ss_pred EEEEcCccHHhhccCCCCHHHHHHHHHHHHhC--cCccCc-c-cCCHHHHHH----HHHHHHhCCCCCC---EEEEcCcH
Confidence 4566655422 2 4799999998877421 111111 0 112333344 4889999985443 24667888
Q ss_pred hHHHHHHHHhh--cCCCCeEEEecCCCCccccccccccCCcccccccc----------eeEEeecccCC-----CCCCCC
Q 018318 107 SPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI----------YFESLPYKVNS-----STGYID 169 (358)
Q Consensus 107 t~a~~~~l~a~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~----------~~~~~~~~~~~-----~~~~id 169 (358)
++|+..++..+ ..++|+|++.++.|.+..... +...+. ...++.++.+. .+...|
T Consensus 106 sea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 177 (413)
T cd00610 106 TEAVEAALKLARAYTGRKKIISFEGAYHGRTLGA--------LSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADD 177 (413)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHH--------HHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHH
Confidence 99999998877 367899999987765532111 011110 01122233220 012348
Q ss_pred HHHHHHHHhhc--CCcEEEEcCCC--CCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc-C-CCCC-cccEE
Q 018318 170 YDKLEEKALDF--RPKLIICGGSA--YPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIV 238 (358)
Q Consensus 170 ~~~l~~~l~~~--~~~~v~~~~~~--~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-~-~~~~-~~d~~ 238 (358)
+++++++++++ ++++|+++... .|...+ +++|.++|++||+++++|++|. |+...+.. . ...+ ..|++
T Consensus 178 ~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~ 256 (413)
T cd00610 178 LEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIV 256 (413)
T ss_pred HHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeE
Confidence 99999998763 45666665432 234445 8999999999999999999986 43222111 0 1112 34665
Q ss_pred EecCCccCCC-CCeeEEEEeCCCCCCCCCCCCCccccHHHHh--hhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHH
Q 018318 239 TTTTHKSLRG-PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKI--NFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (358)
Q Consensus 239 ~~s~~K~l~g-~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~ 315 (358)
+++|++++ .+.|++++++ ++.+.+ .......+. +.+...+++..++++.+.. ....
T Consensus 257 --t~sK~l~~g~~~g~~~~~~---------------~~~~~~~~~~~~~~~t~-~~~~~~~~a~~a~l~~l~~---~~~~ 315 (413)
T cd00610 257 --TLGKGLGGGLPLGAVLGRE---------------EIMDAFPAGPGLHGGTF-GGNPLACAAALAVLEVLEE---EGLL 315 (413)
T ss_pred --EEcccccCccccEEEEEcH---------------HHHHhhccCCCCCCCCC-CcCHHHHHHHHHHHHHHHh---ccHH
Confidence 55699854 4568888766 344443 111111111 2233334444555655432 3556
Q ss_pred HHHHHHHHHHHHHHhhCCc--eeee-CCCcceEEEEEcC
Q 018318 316 KQVKANAVALGNYLTGKGY--SLVT-GGTENHLVLWDLR 351 (358)
Q Consensus 316 ~~~~~~~~~l~~~L~~~G~--~~~~-~~~~~~~~~v~~~ 351 (358)
+++.++.+++++.|++.+. .+.. ....+.++++.+.
T Consensus 316 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (413)
T cd00610 316 ENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELV 354 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEe
Confidence 7788888888888877532 2211 1234567777664
No 277
>PRK08637 hypothetical protein; Provisional
Probab=99.54 E-value=5.6e-13 Score=127.28 Aligned_cols=225 Identities=12% Similarity=0.100 Sum_probs=127.8
Q ss_pred ccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCccc-ccccceeEEeecccCCCCCCCCHHHHHHHHh
Q 018318 101 VQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKI-SATSIYFESLPYKVNSSTGYIDYDKLEEKAL 178 (358)
Q Consensus 101 v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~ 178 (358)
++.++| ++++..++.++++|||+|++..|.|+.+.. .+ ...|++ ++.++...+++.+|+++++++++
T Consensus 72 I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~~g~~--vv~v~~~~~~~~~d~~~l~~~~~ 140 (388)
T PRK08637 72 PIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL---------TFNTRRGAE--IVTYPIFDEDGGFDTDALKEALQ 140 (388)
T ss_pred eeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH---------HHHHhcCCE--EEEecccCCCCcCCHHHHHHHHH
Confidence 445666 468988999999999999999998875431 11 234554 44444421345789999999886
Q ss_pred --hcCC-cEEEEcCCCCCC--c---cchHHHHHHHHH-----hCCEEEEechhhhhhhhccccCCC----C-C---ccc-
Q 018318 179 --DFRP-KLIICGGSAYPR--D---WDYARFRAVADK-----CGALLLCDMAHISGLVAAQEAANP----F-E---YCH- 236 (358)
Q Consensus 179 --~~~~-~~v~~~~~~~~~--~---~~l~~i~~la~~-----~g~~lvvD~a~~~g~~~~~~~~~~----~-~---~~d- 236 (358)
..+. +++++++++||+ . ..+++|+++|++ |++++|+|+++ .++.+.+....+ + + .+-
T Consensus 141 ~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y-~~l~~~~~~~~~~~~~~~~~~~~vi~ 219 (388)
T PRK08637 141 AAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAY-FGLFYEDSYKESLFAALANLHSNILA 219 (388)
T ss_pred hhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccc-hhcccCCccchhhHHHhhcccccceE
Confidence 2233 456677788873 2 346788887775 89999999994 455443321111 1 1 111
Q ss_pred EEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh----cCCCCcCCCChhHHHHHHHHHHHhccHH
Q 018318 237 IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA----VFPSLQGGPHNHQIGALAVALKQASTPA 310 (358)
Q Consensus 237 ~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~al~~al~~~~~~~ 310 (358)
+.+.|++|.+ +|.|.|+++++.... . +.++.+.+... ..... .+.+.....++..++ ....
T Consensus 220 i~~~s~SK~~~~pGlRlG~~~~~~~~~----~-----~~~l~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l---~~~~ 286 (388)
T PRK08637 220 VKLDGATKEEFVWGFRVGFITFGTKAG----S-----SQTVKEALEKKVKGLIRSNI-SNGPHPSQSAVLRAL---NSPE 286 (388)
T ss_pred EEeccccccCCCcccceEEEEEccccC----C-----cHHHHHHHHHHHHHHhhccc-CCCCcHHHHHHHHHh---CCHH
Confidence 2345999964 678889998753000 0 00344443321 01111 112222222222222 2223
Q ss_pred HH----HHHHHHHHHHHHHHHHHhhC----CceeeeCCCcceEEEEEcC
Q 018318 311 FK----AYAKQVKANAVALGNYLTGK----GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 311 ~~----~~~~~~~~~~~~l~~~L~~~----G~~~~~~~~~~~~~~v~~~ 351 (358)
+. ..+.+..+.++.+.+.|... ++.+.. +..+..+|+.+.
T Consensus 287 ~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~l~ 334 (388)
T PRK08637 287 FDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYP-FNSGYFMCLKLK 334 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc-ccceEEEEecCC
Confidence 32 22334555566677777665 466554 457788998874
No 278
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.54 E-value=7.8e-13 Score=126.33 Aligned_cols=242 Identities=16% Similarity=0.111 Sum_probs=139.3
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh----cC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV----LE 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~----~~ 119 (358)
+|+|.+|+.+.+......+ ..+ ..+...+++ ++++++.+.+. .++++||++|+..++.++ ..
T Consensus 49 ~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~~ 114 (389)
T PRK01278 49 HPHLVEALKEQAEKLWHVS---NLY--RIPEQERLA----ERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHYG 114 (389)
T ss_pred CHHHHHHHHHHHHhcCccc---ccc--CChHHHHHH----HHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHHh
Confidence 7999999988875422111 111 123344554 67777765443 466789999999998776 45
Q ss_pred CCC----eEEEecCCCCccccccccccCCcccccccceeEEeec-ccCCCC----CCCCHHHHHHHHhhcCCcEEEEcCC
Q 018318 120 PHD----RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY-KVNSST----GYIDYDKLEEKALDFRPKLIICGGS 190 (358)
Q Consensus 120 ~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~----~~id~~~l~~~l~~~~~~~v~~~~~ 190 (358)
+|| +|++..+.|.+..... +...+.......+ +.. .+ ...|++++++++++ ++++|+++.+
T Consensus 115 ~G~~~r~~vi~~~~~yhg~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~-~~~avivep~ 184 (389)
T PRK01278 115 KGHPERYRIITFEGAFHGRTLAT--------IAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITP-NTAAILIEPI 184 (389)
T ss_pred cCCCCCCEEEEECCCcCCCcHHH--------HhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCC-CeEEEEEecc
Confidence 676 8998887765542111 1111110000000 100 01 13689999999865 7888888754
Q ss_pred CCC---C---ccchHHHHHHHHHhCCEEEEechhhhhhhhccccC-C-CCC-cccEEEecCCccCC-CCCeeEEEEeCCC
Q 018318 191 AYP---R---DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA-N-PFE-YCHIVTTTTHKSLR-GPRAGMIFYRKGP 260 (358)
Q Consensus 191 ~~~---~---~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~-~-~~~-~~d~~~~s~~K~l~-g~~gG~i~~~~~~ 260 (358)
+++ . ...+++|.++|++||+++|+|++|. |+...+... . ..+ ..|+ .+++|.++ |.+.|+++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi--~t~sK~l~~G~~ig~~~~~~~- 260 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDI--MAVAKGIGGGFPLGACLATEE- 260 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCE--EEEehhccCCcceEEEEEcHH-
Confidence 332 1 2368999999999999999999975 543333211 0 112 3465 46789884 557788888773
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
+.+.+.......+.+ .+....++..++++.+.. +...++.+++.+++++.|+.
T Consensus 261 --------------~~~~~~~~~~~~t~~-~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~ 313 (389)
T PRK01278 261 --------------AAKGMTPGTHGSTYG-GNPLAMAVGNAVLDVILA---PGFLDNVQRMGLYLKQKLEG 313 (389)
T ss_pred --------------HHhccCCCCCCCCCC-ccHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHH
Confidence 333333222222222 233334444455655432 23445566666777776665
No 279
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.53 E-value=8e-13 Score=116.96 Aligned_cols=273 Identities=19% Similarity=0.168 Sum_probs=167.1
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHH-HHHHHHhhc--C
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA-NFAAYTAVL--E 119 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a-~~~~l~a~~--~ 119 (358)
.|+.+..+..+.....|+.+-..++......|.+.= ..+-++++.+.|+...| +..+.+|.. +..++.+.+ .
T Consensus 43 ~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp-~~lgdklApLiGA~~~E----vvv~dtts~nl~k~L~aalr~~ 117 (407)
T COG3844 43 RPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLP-ERLGDKLAPLIGARAGE----VVVTDTTSINLFKVLAAALRPQ 117 (407)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhch-hHHHHHhhhhhcCCCCc----eEEeCCcchHHHHHHHHHhccC
Confidence 454555555444445555444334433334555433 24568999999999865 334555543 444555554 4
Q ss_pred CCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC--CCCccc
Q 018318 120 PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA--YPRDWD 197 (358)
Q Consensus 120 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~--~~~~~~ 197 (358)
+|++|++... +.+...++-.. ..+...+.. +++ .+.+.|+++++++.+ .+.+|++++.+ +|...|
T Consensus 118 ~~r~vIv~E~---~~fpTdly~a~-g~~~~~~~~-----~~~---~~~~~P~~~~~~~~d-d~AvV~L~~V~y~TGql~d 184 (407)
T COG3844 118 EGRRVIVSEG---DNFPTDLYIAE-GLADLLGIG-----YDL---EGVIAPRALEEAITD-DVAVVLLSHVNYKTGQLLD 184 (407)
T ss_pred CCceEEeecC---CCCCcchhhhc-chhhhhccc-----ccc---eeeeChHHHHHhhcc-ceEEEEeccccccccceee
Confidence 6899998763 22222222111 011222221 221 356888999999875 67777777655 456789
Q ss_pred hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCC-CCCe-eEEEEeCCCCCCC--CCCCCC-
Q 018318 198 YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLR-GPRA-GMIFYRKGPKPPK--KGQPEG- 270 (358)
Q Consensus 198 l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~-g~~g-G~i~~~~~~~~~~--~~~~~~- 270 (358)
+.+|.+++|+||++++.|-||+.|.+. ..+. ++|+.+.+++|.|. ||.+ ++++..++..+.. +.+.+.
T Consensus 185 m~aiT~~AH~~galv~wDLAHsaGavp-----~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~g 259 (407)
T COG3844 185 MRAITALAHQHGALVGWDLAHSAGAVP-----VDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWG 259 (407)
T ss_pred HHHHHHHHHhcCceEEeehhcccCCcc-----eeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccC
Confidence 999999999999999999999998653 3332 89999999999984 5555 7777766533221 111110
Q ss_pred c--cccHHHHhhh--hcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC----Cceeee
Q 018318 271 A--VYDFEDKINF--AVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK----GYSLVT 338 (358)
Q Consensus 271 ~--~~~~~~~~~~--~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----G~~~~~ 338 (358)
. .+.+.+.... ...-...|++.+..++++-.+|+.....++.+.+++.....++|.+.++.+ ++++..
T Consensus 260 ha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~t 335 (407)
T COG3844 260 HARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVT 335 (407)
T ss_pred CCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEec
Confidence 0 0011111111 011123466777778888888887655567888899999999999998875 567665
No 280
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.53 E-value=1.1e-12 Score=119.22 Aligned_cols=226 Identities=15% Similarity=0.137 Sum_probs=144.5
Q ss_pred cccccCChHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccc-cccceeEEeecccCC-CCCCCCHHHHHHHH
Q 018318 100 NVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS-ATSIYFESLPYKVNS-STGYIDYDKLEEKA 177 (358)
Q Consensus 100 ~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~id~~~l~~~l 177 (358)
.|++.++|.|+.++...+..|||..+++.|.|+|+-- .++ ..|. +++++..++ +++.++.+++|+++
T Consensus 149 ~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr---------dl~~rTgv--eivpv~c~Ss~~f~itv~alE~A~ 217 (471)
T KOG0256|consen 149 VVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR---------DLRWRTGV--EIVPVHCSSSNGFQITVEALEAAL 217 (471)
T ss_pred eEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc---------cceeccCc--eEEEEEeecCCCccccHHHHHHHH
Confidence 3555666789999999999999999999999987531 222 2554 455544433 35689999999988
Q ss_pred hhc-----CCcEEEEcCCCCC--C---ccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC-C-------ccc--E
Q 018318 178 LDF-----RPKLIICGGSAYP--R---DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-E-------YCH--I 237 (358)
Q Consensus 178 ~~~-----~~~~v~~~~~~~~--~---~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~-~-------~~d--~ 237 (358)
.+. +.|-|++.+|+|| . +..+..+.++|.++++.+|+|++. +|-++......++ + ..| -
T Consensus 218 ~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIy-a~sVF~~~~F~Sv~ev~~~~~~~~~rvH 296 (471)
T KOG0256|consen 218 NQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIY-AGSVFDKSEFRSVLEVRKDPHLDPDRVH 296 (471)
T ss_pred HHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhh-cccccCccCceEHHHHhhccccCCCcEE
Confidence 652 4567777778877 2 334778888999999999999994 4544432111111 1 122 3
Q ss_pred EEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHH
Q 018318 238 VTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (358)
Q Consensus 238 ~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~ 315 (358)
++-|++|-| +|.+-|.|+..++ .+.....+....+.-+ +....+.+...+=....+..+.+..
T Consensus 297 ivyslSKD~GlpGfRvGviYS~ne--------------~VvsaA~kmssf~~vS-s~tQ~~la~LLSD~~f~~~yl~en~ 361 (471)
T KOG0256|consen 297 IVYSLSKDFGLPGFRVGVIYSNNE--------------DVVSAATKMSSFGLVS-SQTQYLLASLLSDEEFTREYLRENN 361 (471)
T ss_pred EEEEeccccCCCceEEEEEEecCh--------------HHHHHHHHHhhccCCc-HHHHHHHHHHhchHHHHHHHHHHHH
Confidence 677899976 4556699999885 4433222211112111 1111121111111112212235566
Q ss_pred HHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCCC
Q 018318 316 KQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL 353 (358)
Q Consensus 316 ~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~~ 353 (358)
+|++...+++-+.|++.|+++.. .+++-.+|+|++.+
T Consensus 362 ~Rl~~rh~~~~~gLk~lgI~cl~-s~AGlF~wvDlr~l 398 (471)
T KOG0256|consen 362 KRLRIRHRYIVEGLKALGIPCLK-SNAGLFCWVDLRKL 398 (471)
T ss_pred HHHHHHHHHHHhhHHhcCCceee-cCCeeEEEEEhHHh
Confidence 77888888999999999999986 67888899999864
No 281
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.53 E-value=9.6e-13 Score=135.96 Aligned_cols=276 Identities=11% Similarity=0.028 Sum_probs=155.9
Q ss_pred CCCHHHHHHHhcccccCCCCCCCCCCCCCC-chhH-HHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-c
Q 018318 42 FTSFAVIEALGSALTNKYSEGMPGNRYYGG-NEFI-DEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-L 118 (358)
Q Consensus 42 ~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~-~~~~-~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~ 118 (358)
.+|+.|++++.+.... + +.|++ |... .+.+ +.+. +.+..+++++|++.++. -++.++|.+..+++.+. +
T Consensus 116 ~~P~~v~~~i~~~~~~-~-TaytP--YqaEisQG~lqal~-~~Qt~ia~LtG~~~ana---SL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 116 HVPPVILRNILENPGW-Y-TQYTP--YQAEIAQGRLESLL-NYQTMITDLTGLPMSNA---SLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred cCCHHHHHHHHhChHH-H-hhcCC--CchHHHHHHHHHHH-HHHHHHHHHhCCChhhE---eecCChHHHHHHHHHHHhc
Confidence 3788887888765421 1 12221 1111 1222 2232 45688999999998532 22345566777676666 5
Q ss_pred CCC--CeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC-CCCCc
Q 018318 119 EPH--DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS-AYPRD 195 (358)
Q Consensus 119 ~~g--d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~-~~~~~ 195 (358)
++| |+|++...+|++...... ...+..|.. ++.++.+ + .| ...+ ..-.+++..+ .+|.+
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~-----t~a~~~Gie--V~~v~~~--~--~~------~~~~-~v~~vlvq~P~~~G~v 249 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQ-----TRADGLGLE--VVVADEK--D--FD------YSSG-DVCGVLVQYPATDGEV 249 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHH-----HhhhhcCCE--EEEecch--h--hc------cccC-ceEEEEEecCCCCeEE
Confidence 644 789999988876543211 011224544 3333322 1 11 1111 2223444444 46778
Q ss_pred cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccC-----CCCCeeEEEEeCCCCCCCCC---
Q 018318 196 WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSL-----RGPRAGMIFYRKGPKPPKKG--- 266 (358)
Q Consensus 196 ~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l-----~g~~gG~i~~~~~~~~~~~~--- 266 (358)
.|+++|+++||++|+++++ ++|..++..- ..+-+ |+|++++++|||+ +||..|++++++++.+..++
T Consensus 250 ~dv~~I~~~ah~~GaL~iV-aad~lal~~l---~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriV 325 (993)
T PLN02414 250 LDYAEFVKNAHANGVKVVM-ATDLLALTML---KPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRII 325 (993)
T ss_pred cCHHHHHHHHHHcCCEEEE-EECHHHhcCC---CCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCccc
Confidence 8999999999999999999 7777765431 11223 9999999999997 67777999998865432211
Q ss_pred -------CCCCccccHHHHhhhhcCCCCcCCCChhH----HHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHhhCCc
Q 018318 267 -------QPEGAVYDFEDKINFAVFPSLQGGPHNHQ----IGALAVALK-QASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (358)
Q Consensus 267 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~al~~al~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~ 334 (358)
++..+...+..+-+..++- .++.++.. .++++.... .+...+++++.+++.+++.++++.|.+.|+
T Consensus 326 G~s~d~~g~~~~~l~LqtReqhiRrE--kaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~ 403 (993)
T PLN02414 326 GVSVDSSGKPALRMAMQTREQHIRRD--KATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGF 403 (993)
T ss_pred CcccCCCCCcccccccccccchhhhc--ccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 1110000000011111111 23344422 233222212 233356788889999999999999998998
Q ss_pred eeeeCCCcceEEEEEc
Q 018318 335 SLVTGGTENHLVLWDL 350 (358)
Q Consensus 335 ~~~~~~~~~~~~~v~~ 350 (358)
++..++ .-.++.+.+
T Consensus 404 ~~~~~~-~f~~vt~~~ 418 (993)
T PLN02414 404 QVQSLP-FFDTVKVKC 418 (993)
T ss_pred ccCCCC-CcCeEEEec
Confidence 886532 223555554
No 282
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.52 E-value=3.1e-12 Score=122.56 Aligned_cols=260 Identities=19% Similarity=0.096 Sum_probs=149.3
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCC-C
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPH-D 122 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~g-d 122 (358)
+|.+.+++.+.+... + ....+| . .+...+++ ++++++++.+..+ ..+++++|++|+..++..+..+| +
T Consensus 61 ~p~v~~ai~~~~~~~-~--~~~~~~-~-~~~~~~la----~~l~~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~g~~ 129 (398)
T PRK03244 61 HPAVVEAVTRQLATL-G--HVSNLF-A-TEPQIALA----ERLVELLGAPEGG--RVFFCNSGAEANEAAFKLARLTGRT 129 (398)
T ss_pred CHHHHHHHHHHHHhc-c--CccCcc-C-CHHHHHHH----HHHHHhCCCCCCC--EEEEeCchHHHHHHHHHHHHHHCCC
Confidence 689999998877532 1 111122 1 12223444 7888888854211 24566788999999998776566 4
Q ss_pred eEEEecCCCCccccccccccCCcccccccce----------eEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC
Q 018318 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIY----------FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAY 192 (358)
Q Consensus 123 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~ 192 (358)
+|+...+.|.+.... .+...+.. .....++ ..|++++++++.+ ++++|+++.+.+
T Consensus 130 ~ii~~~~~yhg~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~~~~-~~~aviiep~~~ 194 (398)
T PRK03244 130 KIVAAEGGFHGRTMG--------ALALTGQPAKRAPFEPLPGGVEHVP------YGDVDALAAAVDD-DTAAVFLEPIQG 194 (398)
T ss_pred eEEEECCCcCCccHH--------HHhccCCcccccCCCCCCCCceEeC------CCCHHHHHHhhcC-CeEEEEEecccC
Confidence 666666555443210 01111110 0111111 2488999998853 678888876544
Q ss_pred C--Cccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc-CCCC-C-cccEEEecCCccCC-CCCeeEEEEeCCCCC
Q 018318 193 P--RDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANPF-E-YCHIVTTTTHKSLR-GPRAGMIFYRKGPKP 262 (358)
Q Consensus 193 ~--~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-~~~~-~-~~d~~~~s~~K~l~-g~~gG~i~~~~~~~~ 262 (358)
+ ...| +++|.++|++||+++|+|++|. |+...+.. .... + ..|++ +++|+|+ |.+.|+++.+++
T Consensus 195 ~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~--t~sK~l~~G~~ig~~~~~~~--- 268 (398)
T PRK03244 195 EAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVV--TLAKGLGGGLPIGACLAFGP--- 268 (398)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEE--EEchhhhCCcccEEEEEcHH---
Confidence 3 3444 8899999999999999999975 54322211 0111 2 45765 5579985 445688888773
Q ss_pred CCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeC-CC
Q 018318 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG-GT 341 (358)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~-~~ 341 (358)
+.+.+.......+.+ .+....++..++++.+.. +.+.+++.+..++|++.|++.++++... ..
T Consensus 269 ------------~~~~~~~~~~~~t~~-~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g 332 (398)
T PRK03244 269 ------------AADLLTPGLHGSTFG-GNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHPLVDHVRG 332 (398)
T ss_pred ------------HHhhccCCCCcCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCCceeeEee
Confidence 444443211111112 233334444445544432 2456778888899999999876532211 13
Q ss_pred cceEEEEEcC
Q 018318 342 ENHLVLWDLR 351 (358)
Q Consensus 342 ~~~~~~v~~~ 351 (358)
.+..+|+.+.
T Consensus 333 ~g~~~~i~~~ 342 (398)
T PRK03244 333 RGLLLGIVLT 342 (398)
T ss_pred ccEEEEEEEe
Confidence 5667777763
No 283
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.50 E-value=1.6e-12 Score=121.72 Aligned_cols=215 Identities=17% Similarity=0.155 Sum_probs=129.9
Q ss_pred HHHHHHHhcCCCCCCCCccccccCChH-HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecc
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGSP-ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt~-a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 160 (358)
.++++++++|+...+ .|+.++|+. ++..+ ..++++|| |++..|+|..+.. .++..|.. +++++
T Consensus 58 L~~~ia~~~~~~~~~---~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~~---------~~~~~g~~--~~~v~ 121 (339)
T PRK06959 58 LAACAARYYGAPDAA---HVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYAP---------AFARHGHR--VVPLD 121 (339)
T ss_pred HHHHHHHHhCCCCcc---cEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHHH---------HHHHCCCE--EEeec
Confidence 348899999997421 356677764 66644 44578887 7788887765431 23445654 44443
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC-Cc
Q 018318 161 VNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-EY 234 (358)
Q Consensus 161 ~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~-~~ 234 (358)
.+ . +. +.+ .++++++++|+|| ...+ +++|++.|+++++++|+|+++. .+...... ..+ +.
T Consensus 122 ~~--~-----~~----~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~-~~~~~~s~-~~~~~~ 187 (339)
T PRK06959 122 EA--A-----DT----LPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTLPAASL-AAHTDR 187 (339)
T ss_pred cc--c-----hh----ccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCc-cCCCcccc-hhccCC
Confidence 32 1 22 221 3567888888887 3445 4455555678899999999954 33221111 011 11
Q ss_pred -ccEEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH
Q 018318 235 -CHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF 311 (358)
Q Consensus 235 -~d~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~ 311 (358)
--+++.|++|.+ +|.|.||++++. ++.+.+.....+.. .+.....+..+++ ...++
T Consensus 188 ~~vi~l~SfSK~~gl~GlRiGy~v~~~---------------~li~~l~~~~~~~~---vs~~~q~a~~~~L---~~~~~ 246 (339)
T PRK06959 188 PGLVVLRSVGKFFGLAGVRAGFVLAAP---------------ALLAALRDALGAWT---VSGPARHAVRAAF---ADAAW 246 (339)
T ss_pred CCEEEEecChhhcCCcchheEEEecCH---------------HHHHHHHHhcCCCC---CcHHHHHHHHHHh---CcHHH
Confidence 127889999976 577889999977 45565655432221 1222222222333 22333
Q ss_pred -HHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEc
Q 018318 312 -KAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDL 350 (358)
Q Consensus 312 -~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~ 350 (358)
++.++++.++++++.+.|++.|+++.. ....+|+++
T Consensus 247 ~~~~~~~~~~~r~~l~~~L~~~g~~~~~---~~~f~~~~~ 283 (339)
T PRK06959 247 QAAMRERLAADGARLAALLRAHGFAVHA---TPLFSWTDD 283 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCccC---cceEEEEeC
Confidence 566788888999999999999987752 346678875
No 284
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.50 E-value=1.8e-12 Score=124.00 Aligned_cols=251 Identities=18% Similarity=0.134 Sum_probs=146.8
Q ss_pred cceeEecc--CCCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+.+..+ .+.+ +|+|.+|+.+.+...+..+ ..+ ..+...+++ ++|+++++.+. .++++||
T Consensus 36 ~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~la----~~L~~~~~~~~-----~~f~~SG 101 (397)
T TIGR03246 36 EYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIG---NGY--TNEPVLRLA----KKLVDATFADK-----VFFCNSG 101 (397)
T ss_pred EEEECCcCHhhccCCCCCHHHHHHHHHHHHhccccc---Ccc--CCHHHHHHH----HHHHhhCCCCE-----EEEeCCc
Confidence 44555543 3444 8999999988875422111 111 123344555 77888877543 4678899
Q ss_pred hHHHHHHHHhhc--------CCCCeEEEecCCCCccccccccccCCcccccccce-----e-----EEeecccCCCCCCC
Q 018318 107 SPANFAAYTAVL--------EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-----F-----ESLPYKVNSSTGYI 168 (358)
Q Consensus 107 t~a~~~~l~a~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~~i 168 (358)
++|+..++.... ...++|+.....|.+.... .+...+.. + .+..+ ...
T Consensus 102 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 167 (397)
T TIGR03246 102 AEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLF--------TVSVGGQPKYSQGFAPLPGGIKHA------PYN 167 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHH--------HHHhcCCcccccCCCCCCCceEEe------CCC
Confidence 999999988662 1234677666444332110 01111100 0 01111 135
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCC--CCC----ccchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEE
Q 018318 169 DYDKLEEKALDFRPKLIICGGSA--YPR----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVT 239 (358)
Q Consensus 169 d~~~l~~~l~~~~~~~v~~~~~~--~~~----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~ 239 (358)
|++++++++.+ ++++|+++... .+. ...+++|.++|++||+++|+|++| .|+...+... ..++ ..|++
T Consensus 168 d~~~l~~~l~~-~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~- 244 (397)
T TIGR03246 168 DLAAAKALISD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL- 244 (397)
T ss_pred CHHHHHHHhcc-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE-
Confidence 89999999864 67888887432 221 234899999999999999999998 5663333211 1112 45766
Q ss_pred ecCCccC-CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHH
Q 018318 240 TTTHKSL-RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQV 318 (358)
Q Consensus 240 ~s~~K~l-~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~ 318 (358)
+++|.+ +|.+.|+++++++ +.+.+.......+.+ .++...++..++++.+.. +...++.
T Consensus 245 -t~~K~lggG~pigav~~~~~---------------i~~~~~~~~~~~t~~-~~p~~~aaa~a~l~~~~~---~~l~~~~ 304 (397)
T TIGR03246 245 -TSAKALGGGFPIGAMLTTTE---------------IAAHLKVGTHGTTYG-GNPLACAVAGKVLDLVNT---PELLAGV 304 (397)
T ss_pred -EeehhhhCCcceeEEEEcHH---------------HHHhccCCCcCCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHH
Confidence 678988 4556688888773 444443221222222 233344444455655432 3567788
Q ss_pred HHHHHHHHHHHhhCC
Q 018318 319 KANAVALGNYLTGKG 333 (358)
Q Consensus 319 ~~~~~~l~~~L~~~G 333 (358)
+++.++|++.|++.+
T Consensus 305 ~~~~~~l~~~L~~l~ 319 (397)
T TIGR03246 305 KQRHDLFVDGLEKIN 319 (397)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888999999988764
No 285
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.48 E-value=7.6e-12 Score=119.78 Aligned_cols=256 Identities=13% Similarity=0.063 Sum_probs=146.3
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~---- 119 (358)
+|.|.+|+.+.+.. ..... +.. ..+...+++ ++++++.+.+. .++++||++|+..++.....
T Consensus 58 ~p~v~~ai~~~~~~-~~~~~---~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~~ 123 (396)
T PRK04073 58 HPKIIQALKDQADK-VTLTS---RAF-HSDQLGPWY----EKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAYD 123 (396)
T ss_pred CHHHHHHHHHHHhh-ccccc---ccc-CCHHHHHHH----HHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhhh
Confidence 79999999887753 21111 111 123334555 77888877543 46788999999999886631
Q ss_pred -----CC-CeEEEecCCCCccccccccccCCcccccccce-----eE-----EeecccCCCCCCCCHHHHHHHHhhcCCc
Q 018318 120 -----PH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-----FE-----SLPYKVNSSTGYIDYDKLEEKALDFRPK 183 (358)
Q Consensus 120 -----~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~-----~~~~~~~~~~~~id~~~l~~~l~~~~~~ 183 (358)
+| ++|++....|.+.... .+.+.+.. .. +..++ ..|++++++++.+ +++
T Consensus 124 ~~g~~~~r~~ii~~~~~~HG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~-~~~ 188 (396)
T PRK04073 124 VKGVEPNKAEIIACEGNFHGRTMA--------AVSLSSEEEYKRGFGPMLPGIKKIP------YGDLEALKAAITP-NTA 188 (396)
T ss_pred ccCCCCCCCEEEEECCCcCCCCHH--------HHhhcCCcccccCCCCCCCCceEeC------CCCHHHHHHhccc-CeE
Confidence 34 6788776544332110 01111100 00 01111 2378999998864 678
Q ss_pred EEEEcCCCCC--Cccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc-CCC-CC-cccEEEecCCccCCC--CCee
Q 018318 184 LIICGGSAYP--RDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANP-FE-YCHIVTTTTHKSLRG--PRAG 252 (358)
Q Consensus 184 ~v~~~~~~~~--~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-~~~-~~-~~d~~~~s~~K~l~g--~~gG 252 (358)
+|+++.+.++ ...| +++|.++|++||+++|+|++|. |+...+.. ... .+ ..|+++ ++|.+++ .+.|
T Consensus 189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~--~sK~lg~gg~~ig 265 (396)
T PRK04073 189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYI--LGKALGGGVFPIS 265 (396)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEE--ecccccCCCCcce
Confidence 8888766443 3333 8999999999999999999976 44322211 111 12 467765 4798754 4678
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+++++++ +.+.+.......+.+ .+....++..++|+.+.+ +...++..++.++|.+.|++.
T Consensus 266 ~~~~~~~---------------i~~~~~~~~~~~t~~-~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~l 326 (396)
T PRK04073 266 CVAANRD---------------ILGVFTPGSHGSTFG-GNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKEI 326 (396)
T ss_pred EEEEcHH---------------HHhhhcCCCCCCCCC-CCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhh
Confidence 8888773 444443221112222 233344444455655432 234566777889999999886
Q ss_pred CceeeeC-CCcceEEEEEc
Q 018318 333 GYSLVTG-GTENHLVLWDL 350 (358)
Q Consensus 333 G~~~~~~-~~~~~~~~v~~ 350 (358)
+...... ...+..+++++
T Consensus 327 ~~~~i~~~~~~g~~~~~~~ 345 (396)
T PRK04073 327 DNPMIKEVRGRGLFIGVEL 345 (396)
T ss_pred cCCcccceecceEEEEEEe
Confidence 4322111 12345566665
No 286
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.48 E-value=2.7e-12 Score=118.20 Aligned_cols=229 Identities=16% Similarity=0.164 Sum_probs=136.5
Q ss_pred cCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc
Q 018318 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL 118 (358)
Q Consensus 39 ~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~ 118 (358)
+-+..++++++++...+.+... -... ........++- .+...+..++|++. .+++++.+.|+..++.++.
T Consensus 35 G~s~~~~e~iea~~~~~~~~v~-Le~~---l~~g~~~~R~~-~~~~~~~~~~~aea-----~~ivnnn~aAVll~~~al~ 104 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRAPVE-LETD---LKTGKRGARLT-ELAELLCGLTGAEA-----AAIVNNNAAAVLLTLNALA 104 (395)
T ss_pred CCccCCHHHHHHHHHHhcccce-eeee---cccchhhHHHH-HHHHHHhcccchhh-----eeeECCcHHHHHHHHhhhc
Confidence 5567799999998876643221 1100 11112222332 23355555555554 2445666778887777777
Q ss_pred CCCCeEEEecCCC-CccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEE-EcCCCCCC--
Q 018318 119 EPHDRIMGLDLPS-GGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-CGGSAYPR-- 194 (358)
Q Consensus 119 ~~gd~Vl~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~-~~~~~~~~-- 194 (358)
.++..|+.--+.- ++++... ..++..|+++ +.+.. ...-...+++.+|.+ ++++++ +..++++.
T Consensus 105 ~~~EvVis~g~lV~gg~~~v~------d~~~~aG~~l--~EvG~---tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~~ 172 (395)
T COG1921 105 EGKEVVVSRGELVEGGAFRVP------DIIRLAGAKL--VEVGT---TNRTHLKDYELAINE-NTALLLKVHSSNYGFTG 172 (395)
T ss_pred cCCeEEEEccccccCCCCChh------HHHHHcCCEE--EEecc---cCcCCHHHHHHHhcc-CCeeEEEEeeccccccc
Confidence 6444444322222 3444322 2345677654 44432 346778999999987 565543 44455553
Q ss_pred ccchHHHHHHHHHhCCEEEEechhhhhhhhcc--ccCCCCC-cccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCc
Q 018318 195 DWDYARFRAVADKCGALLLCDMAHISGLVAAQ--EAANPFE-YCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGA 271 (358)
Q Consensus 195 ~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~--~~~~~~~-~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~ 271 (358)
..+.+++.++||++|+++++|.+ +|..-.. ....-+. |+|++++|++|.|+||++|+++++++
T Consensus 173 ~l~~~~l~~ia~~~~lpvivD~a--Sg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKe------------ 238 (395)
T COG1921 173 MLSEEELVEIAHEKGLPVIVDLA--SGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKE------------ 238 (395)
T ss_pred cccHHHHHHHHHHcCCCEEEecC--CccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHH------------
Confidence 45788999999999999999996 3432111 0111123 89999999999999999999999994
Q ss_pred cccHHHHhhhhcC-CCCcCCCChhHHHHHHHHHHHhcc
Q 018318 272 VYDFEDKINFAVF-PSLQGGPHNHQIGALAVALKQAST 308 (358)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~al~~al~~~~~ 308 (358)
+.++++.... ..+. ..-..++++.+||+.+..
T Consensus 239 ---lI~~lq~~~l~Ralr--v~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 239 ---LIEKLQSHPLKRALR--VDKETLAALEAALELYLQ 271 (395)
T ss_pred ---HHHHHHhhhhhhhhh--cCcHhHHHHHHHHHHHcC
Confidence 5555543211 0110 122456788888888765
No 287
>PRK08354 putative aminotransferase; Provisional
Probab=99.47 E-value=6.1e-12 Score=116.48 Aligned_cols=178 Identities=18% Similarity=0.036 Sum_probs=117.7
Q ss_pred cceeEeccCCCC-CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HH
Q 018318 32 RGIELIASENFT-SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PA 109 (358)
Q Consensus 32 ~~~~l~a~~~~~-~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a 109 (358)
..+.+..++++. |+.+.+++.+.+.. . .+|+. ...+ ++++++++|.+ |++++|+ +|
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~-~-~~yp~---------~~~l----~~~ia~~~~~~-------I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI-S-GRYTY---------YEWL----EEEFSKLFGEP-------IVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH-h-hcCCC---------hHHH----HHHHHHHHCCC-------EEECCCHHHH
Confidence 356777776654 77888888665432 1 13331 1234 47888888831 4456665 58
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG 189 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~ 189 (358)
+..++. ++.+||+|++..|+|..+.. .++..|.+ ++.+ .+|++.++++++ +++++++++
T Consensus 67 l~~~~~-~~~~gd~vlv~~P~y~~~~~---------~~~~~g~~--~~~~-------~~d~~~l~~~~~--~~~~vi~~~ 125 (311)
T PRK08354 67 LYLIGI-LALRDRKVIIPRHTYGEYER---------VARFFAAR--IIKG-------PNDPEKLEELVE--RNSVVFFCN 125 (311)
T ss_pred HHHHHH-hhCCCCeEEEeCCCcHHHHH---------HHHHcCCE--Eeec-------CCCHHHHHHhhc--CCCEEEEec
Confidence 776664 44589999999998876531 23455643 3332 367899988875 467787888
Q ss_pred CCCCC--c---cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccC--CCCCeeEEEE
Q 018318 190 SAYPR--D---WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSL--RGPRAGMIFY 256 (358)
Q Consensus 190 ~~~~~--~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l--~g~~gG~i~~ 256 (358)
|+||+ . ..+++|.++|+++|+++|+|+++ .++...+. ... .--+++.|++|++ +|.|.|++++
T Consensus 126 P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y-~~f~~~~~---~~~~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 126 PNNPDGKFYNFKELKPLLDAVEDRNALLILDEAF-IDFVKKPE---SPEGENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcc-hhcccccc---ccCCCcEEEEeccHhhcCCccceeeeeee
Confidence 88873 2 34778888899999999999995 45443221 111 2347889999986 5778899988
No 288
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.45 E-value=1.4e-11 Score=127.97 Aligned_cols=239 Identities=15% Similarity=0.046 Sum_probs=140.1
Q ss_pred HHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCCC--CeEEEecCCCCccccccccccCCcccccccceeEEe
Q 018318 81 LCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPH--DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (358)
Q Consensus 81 ~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~g--d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 157 (358)
+.+..++++.|++..+. -+..++|.+..+++.++ ++++ |+|+++..+|++...... ..++..|. +++
T Consensus 125 ~~Qt~la~LtG~~~ana---Sl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~-----t~a~~~G~--ev~ 194 (954)
T PRK05367 125 NFQTMVADLTGLEIANA---SLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLR-----TRAEPLGI--EVV 194 (954)
T ss_pred HHHHHHHHHHCCChhhc---cccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHH-----HHHHhCCC--EEE
Confidence 35688999999997431 22345566677666666 5554 899999988876542110 01123454 444
Q ss_pred ecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC-CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cc
Q 018318 158 PYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA-YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YC 235 (358)
Q Consensus 158 ~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~-~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~ 235 (358)
.++.+ . |.+ ..++..+++..|+ +|.+.|+++|+++||++|+++++|+.|.+.... ..+-+ |+
T Consensus 195 ~~~~~--~---d~~-------~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~Ga 258 (954)
T PRK05367 195 VGDAA--K---ALD-------HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLL----TPPGEMGA 258 (954)
T ss_pred EecCc--c---CCC-------cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhcCC
Confidence 44432 1 111 1134445555554 567789999999999999999999987332221 12223 99
Q ss_pred cEEEecCCcc-----CCCCCeeEEEEeCCCCC-CC---------CCCCCCccccHH--HHhhhhcCCCCcCCCChhH---
Q 018318 236 HIVTTTTHKS-----LRGPRAGMIFYRKGPKP-PK---------KGQPEGAVYDFE--DKINFAVFPSLQGGPHNHQ--- 295 (358)
Q Consensus 236 d~~~~s~~K~-----l~g~~gG~i~~~~~~~~-~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--- 295 (358)
|++++++||| ++||..|++++++++.+ +. ..++.-+ .+. .+-+...+ ..++.++..
T Consensus 259 Di~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~--~lalqtReqhiRr--ekaTsNict~qa 334 (954)
T PRK05367 259 DIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPAL--RLALQTREQHIRR--EKATSNICTAQV 334 (954)
T ss_pred CEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccc--ccccccccccccc--cccccccchHHH
Confidence 9999999999 67887799999886532 11 1121111 110 00000011 112223221
Q ss_pred HHHHHHH--HHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeCCCcceEEEEEc
Q 018318 296 IGALAVA--LKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDL 350 (358)
Q Consensus 296 ~~al~~a--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~ 350 (358)
+.+..++ +..+...+++++.++...++.++++.|++.|+++..+. .-..+.+.+
T Consensus 335 L~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~-~f~~~~~~~ 390 (954)
T PRK05367 335 LLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDS-FFDTLTVEV 390 (954)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCC-CCCeEEEeC
Confidence 1111111 23344457788889999999999999988899876432 123444543
No 289
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.44 E-value=8.9e-12 Score=119.49 Aligned_cols=246 Identities=16% Similarity=0.067 Sum_probs=137.1
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC---
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE--- 119 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~--- 119 (358)
-+|.|.+++.+.+.. +. ..+..+ ..+....+| +.++++++.+. .++++||++|+..++..+..
T Consensus 48 ~~p~v~~a~~~~~~~-~~--~~~~~~--~~~~~~~~~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-LT--LTSRAF--YNDVLGLAE----KYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-cc--cccccc--cCHHHHHHH----HHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 489999999887643 22 111111 123333444 77888887653 46788999999999987631
Q ss_pred -------CCCeEEEecCCCCccccccccccCCcccccccce-eEEeecccCC---CCCCCCHHHHHHHHhhcCCcEEEEc
Q 018318 120 -------PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNS---STGYIDYDKLEEKALDFRPKLIICG 188 (358)
Q Consensus 120 -------~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~---~~~~id~~~l~~~l~~~~~~~v~~~ 188 (358)
.+++|++....+.+.... .+...+.. ......+... .-...|++++++.++..++++|+++
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e 185 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTIG--------ACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE 185 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccHH--------HHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence 346788777544332110 11111100 0000000000 0013589999999964467888886
Q ss_pred CCCC--CCccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc-CCCCC--cccEEEecCCccCCCC--CeeEEEEe
Q 018318 189 GSAY--PRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANPFE--YCHIVTTTTHKSLRGP--RAGMIFYR 257 (358)
Q Consensus 189 ~~~~--~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-~~~~~--~~d~~~~s~~K~l~g~--~gG~i~~~ 257 (358)
.+.+ |...+ +++|.++|++||+++|+|++|. |+...+.. ..... ..|++++ +|++++. +.|+++++
T Consensus 186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~~--sK~l~~g~~~ig~v~~~ 262 (400)
T PTZ00125 186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVLL--GKALSGGLYPISAVLAN 262 (400)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEEE--cccccCCCcCcEEEEEc
Confidence 5443 44455 9999999999999999999974 44322211 11111 4577765 5998542 56888887
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++ +.+.+.......+.+ .+....++..++++.+..+ ...++..+..+++++.|.+.
T Consensus 263 ~~---------------~~~~~~~~~~~~t~~-~~~~~~~aa~~~l~~i~~~---~~~~~~~~~~~~l~~~l~~l 318 (400)
T PTZ00125 263 DD---------------VMLVIKPGEHGSTYG-GNPLACAVAVEALEVLKEE---KLAENAQRLGEVFRDGLKEL 318 (400)
T ss_pred HH---------------HHhhccCCCCCCCCC-cCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHH
Confidence 73 444433221111122 2223334434555554322 23455566677777777653
No 290
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.43 E-value=4.6e-11 Score=114.62 Aligned_cols=243 Identities=16% Similarity=0.094 Sum_probs=141.6
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc-----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~----- 118 (358)
+|+|.+|+.+.+.. ++.+.+ .+ ..+...+++ +++++++|.+. .++++||++|+..++..+.
T Consensus 55 ~p~v~~a~~~~~~~-~~~~~~--~~--~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~~ 120 (401)
T TIGR01885 55 HPKIVKALTEQAQK-LTLSSR--AF--YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGYK 120 (401)
T ss_pred CHHHHHHHHHHHHh-cccccc--cc--CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhhh
Confidence 79999999887643 321211 11 223344555 77888888643 4678999999999998752
Q ss_pred ----CC-CCeEEEecCCCCccccccccccCCcccccccc---------e-eEEeecccCCCCCCCCHHHHHHHHhhcC--
Q 018318 119 ----EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI---------Y-FESLPYKVNSSTGYIDYDKLEEKALDFR-- 181 (358)
Q Consensus 119 ----~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~---------~-~~~~~~~~~~~~~~id~~~l~~~l~~~~-- 181 (358)
.+ .++|++....|++.... .+...+. . .....++ ..|++++++++++..
T Consensus 121 ~~~~~~~~~~i~~~~~~yhg~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 121 VKGIPENQAIIVSAKGNFHGRTLG--------AISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPN 186 (401)
T ss_pred hcCCCCCCCEEEEECCCcCcccHH--------HHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCC
Confidence 13 34677776655432100 0111110 0 0011111 347899999986532
Q ss_pred CcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC-CC-CC-cccEEEecCCccCCC--CC
Q 018318 182 PKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA-NP-FE-YCHIVTTTTHKSLRG--PR 250 (358)
Q Consensus 182 ~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~-~~-~~-~~d~~~~s~~K~l~g--~~ 250 (358)
..+|+++.. ..|...+ +++|.++|++||+++++|++| .|+...+... .. .+ ..|++++ +|.+++ .+
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~--gK~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLL--GKALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEe--eccccCCCCC
Confidence 345666533 2343333 999999999999999999998 4654333211 11 12 4677765 498854 35
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (358)
.|+++.++ ++.+.+.......+.+ .+....++..++++.+..+ ...+++.++.++|++.|+
T Consensus 264 ig~v~~~~---------------~i~~~~~~~~~~~t~~-~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~ 324 (401)
T TIGR01885 264 VSAVLADD---------------DVMLTIKPGEHGSTYG-GNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLK 324 (401)
T ss_pred cEEEEEcH---------------HHHhhccCCCCCCCCC-CCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHH
Confidence 57777776 3444443322222222 2344455555666655322 345677888999999999
Q ss_pred hCCcee
Q 018318 331 GKGYSL 336 (358)
Q Consensus 331 ~~G~~~ 336 (358)
+.+..+
T Consensus 325 ~l~~~~ 330 (401)
T TIGR01885 325 KLPKPI 330 (401)
T ss_pred hccCCc
Confidence 875443
No 291
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.43 E-value=2.3e-11 Score=115.68 Aligned_cols=262 Identities=16% Similarity=0.106 Sum_probs=146.2
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc-CCC-
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL-EPH- 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~-~~g- 121 (358)
+|+|.+++.+.+..... .+..+ .. +++.+..+++.+.++.+. .++++||++|+..++.... .+|
T Consensus 47 ~p~v~~a~~~~~~~~~~---~~~~~--~~----~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~g~ 112 (377)
T PRK02936 47 HPTVTKAVQEQLDDIWH---VSNLF--TN----SLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHTGK 112 (377)
T ss_pred CHHHHHHHHHHHHhccc---ccccc--CC----HHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhcCC
Confidence 79999999888754221 11111 11 333333466666655432 4667899999999988542 344
Q ss_pred CeEEEecCCCCccccccccccCCccccccccee-EEeecccCCC---CCCCCHHHHHHHHhhcCCcEEEEcCCCC--C--
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYF-ESLPYKVNSS---TGYIDYDKLEEKALDFRPKLIICGGSAY--P-- 193 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~---~~~id~~~l~~~l~~~~~~~v~~~~~~~--~-- 193 (358)
++|++....|.+..... +...+... .....+...+ -...|++++++.+.+ ++++|+++...+ +
T Consensus 113 ~~vi~~~~~~Hg~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~~ 183 (377)
T PRK02936 113 SKIVTFEQSFHGRTFGT--------MSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGVI 183 (377)
T ss_pred CeEEEECCCcCCCcHHh--------hhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCCc
Confidence 56888766544321111 11111100 0000000000 012378999998864 678888764332 1
Q ss_pred --CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C-cccEEEecCCccCC-CCCeeEEEEeCCCCCCCCC
Q 018318 194 --RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YCHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKG 266 (358)
Q Consensus 194 --~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~-~~d~~~~s~~K~l~-g~~gG~i~~~~~~~~~~~~ 266 (358)
....+++|.++|++||+++|+|++|. |+...+. .... . ..|++ +++|.++ |.++|+++++++
T Consensus 184 ~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~-~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~~------- 252 (377)
T PRK02936 184 PADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGT-LFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKKE------- 252 (377)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCch-hhHHHhhCCCCcEE--EEcccccCCCccEEEEEcHH-------
Confidence 12348999999999999999999984 6543332 1111 1 34654 6899985 457888888773
Q ss_pred CCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC--CceeeeC-CCcc
Q 018318 267 QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GYSLVTG-GTEN 343 (358)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--G~~~~~~-~~~~ 343 (358)
+.+.+.......+. +.+....++..++++.+.. +.+.+++.++.+++++.|++. ++..... ...+
T Consensus 253 --------~~~~~~~~~~~~t~-~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 320 (377)
T PRK02936 253 --------LGTAFGPGSHGSTF-GGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKG 320 (377)
T ss_pred --------HHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecc
Confidence 44444322111222 2344445555556655421 345677778888888888763 3432211 1345
Q ss_pred eEEEEEcC
Q 018318 344 HLVLWDLR 351 (358)
Q Consensus 344 ~~~~v~~~ 351 (358)
..+|+++.
T Consensus 321 ~~~~i~~~ 328 (377)
T PRK02936 321 LMIGIECT 328 (377)
T ss_pred eEEEEEec
Confidence 67888764
No 292
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.41 E-value=6.5e-12 Score=116.25 Aligned_cols=242 Identities=15% Similarity=0.196 Sum_probs=158.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh---cCC--C---CeEEEecCCCCccccccccccCC
Q 018318 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV---LEP--H---DRIMGLDLPSGGHLTHGYYTSGG 144 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~---~~~--g---d~Vl~~~~~~~~~~~~~~~~~~~ 144 (358)
+....+|+++...++.+|+.+.+.+| ..+++||+++.++-... .+. | -.++++...|.++-
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~~g--~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~e--------- 184 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDSCG--CGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFE--------- 184 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccccC--ccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHH---------
Confidence 34567888999999999999876554 33566777755544332 111 1 12344443332211
Q ss_pred cccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccchHHHHHHHHH-hCCEEEEechhhhh
Q 018318 145 KKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYP--RDWDYARFRAVADK-CGALLLCDMAHISG 221 (358)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~--~~~~l~~i~~la~~-~g~~lvvD~a~~~g 221 (358)
+..+..+.+++.+++ ++.++.+|+.++.+.+++ ++.+++...+++| ...|+++|.++.-+ +++.+++|+| ..|
T Consensus 185 K~a~yf~v~l~~V~~--~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~-~Gg 260 (491)
T KOG1383|consen 185 KAARYFEVELREVPL--DEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDAC-LGG 260 (491)
T ss_pred HHHhhEEEEEEeeec--cccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeeccc-Ccc
Confidence 122334544444444 555789999999999987 6777766666655 57899999999988 9999999998 456
Q ss_pred hhhc-ccc---CCCCC--cccEEEecCCccCCCCCe-eEEEEeCC-CCCCCCCCCCCccccH---HHHhhh-hcCCCCcC
Q 018318 222 LVAA-QEA---ANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKG-PKPPKKGQPEGAVYDF---EDKINF-AVFPSLQG 289 (358)
Q Consensus 222 ~~~~-~~~---~~~~~--~~d~~~~s~~K~l~g~~g-G~i~~~~~-~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~ 289 (358)
++.+ +.+ +..+. ++-.+..++||.-..|.| ++++.++. +.. .++ .+.+.. ...+++.+
T Consensus 261 Fi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~----------~q~~~~~~w~Gg~y~s~Tlng 330 (491)
T KOG1383|consen 261 FINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLP----------HQLFFHTDWLGGIYASPTLNG 330 (491)
T ss_pred ccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEccccccc----------ceEEEeccccCccccCccccc
Confidence 6653 222 22232 667888999997445777 77777653 110 000 001111 11234445
Q ss_pred CCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeC
Q 018318 290 GPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTG 339 (358)
Q Consensus 290 ~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~ 339 (358)
+.....+++.++++..+..+++.+..+++.++++.|++.+++. +++++.+
T Consensus 331 SR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk 381 (491)
T KOG1383|consen 331 SRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK 381 (491)
T ss_pred CCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC
Confidence 5566777888888888777788888899999999999999997 7888864
No 293
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.41 E-value=6.1e-13 Score=121.47 Aligned_cols=246 Identities=17% Similarity=0.233 Sum_probs=52.6
Q ss_pred cCCCCCHHHHHHHhcccccCCC-------CCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHH
Q 018318 39 SENFTSFAVIEALGSALTNKYS-------EGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (358)
Q Consensus 39 ~~~~~~~~V~~a~~~~~~~~~~-------~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~ 111 (358)
+-.++++++.+++.+... .|. .|..++|| ..++ +.+++++|++.. +++++...|+.
T Consensus 14 GRs~l~~~a~~a~~~~a~-~Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAeaA-----~VvNnnaAAv~ 76 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVAS-GYSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEAA-----LVVNNNAAAVL 76 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccc-cccccccccccccccccc-------cccc----cccccccccccc-----ccccccccccc
Confidence 344678888888765442 231 12233222 2343 678889999873 45677777888
Q ss_pred HHHHhhcCCCCeEEEecCC---CCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEE-E
Q 018318 112 AAYTAVLEPHDRIMGLDLP---SGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-C 187 (358)
Q Consensus 112 ~~l~a~~~~gd~Vl~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~-~ 187 (358)
.++.++. +|.+|++...+ .|+.|-.. ..+...|+. .+.+..+ ..-.+++.+++|.+ +|.+++ +
T Consensus 77 L~l~~la-~~~EvIvsRGelVeiGgsFRip------~vm~~sGa~--lvEVGtt---N~t~~~Dye~AI~e-~Ta~ll~V 143 (367)
T PF03841_consen 77 LALNTLA-KGKEVIVSRGELVEIGGSFRIP------DVMRQSGAR--LVEVGTT---NRTHLSDYEKAITE-NTAALLKV 143 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc-cccccccccccccccccccccc------ccccccccc--ccccccc---cccccccccccccc-cccccccc
Confidence 7777765 46678776532 33322111 133445543 3444332 34567888999976 666654 4
Q ss_pred cCCCCC-----CccchHHHHHHHHHhCCEEEEechhhhhhhhc---------cccCCCCC-cccEEEecCCccCCCCCee
Q 018318 188 GGSAYP-----RDWDYARFRAVADKCGALLLCDMAHISGLVAA---------QEAANPFE-YCHIVTTTTHKSLRGPRAG 252 (358)
Q Consensus 188 ~~~~~~-----~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~---------~~~~~~~~-~~d~~~~s~~K~l~g~~gG 252 (358)
..||+- ...+++++.++||+|++++++|.. +|.... +.....++ |+|+++||+.|.|+||++|
T Consensus 144 h~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaG 221 (367)
T PF03841_consen 144 HTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAG 221 (367)
T ss_dssp -----------------HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-E
T ss_pred cccccccccccccccHHHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeE
Confidence 445542 245899999999999999999996 343221 11112233 8999999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-----------HHHHHHHHHHH
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-----------FKAYAKQVKAN 321 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-----------~~~~~~~~~~~ 321 (358)
++++++ ++.+++++....-.. -..=..++++.++|+.+...+ +..-.+.+.+.
T Consensus 222 iI~Gkk---------------~lI~~lk~~pl~Ral-rvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~r 285 (367)
T PF03841_consen 222 IIVGKK---------------ELIEKLKKHPLGRAL-RVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRAR 285 (367)
T ss_dssp EEEEEH---------------HHHHHHHHHHHTTT--B--HHHHHHHHHHHHH---------------------------
T ss_pred EEEeCH---------------HHHHHHhhCCCcceE-eeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccc
Confidence 999999 466665542110000 011234677777777665311 12224456666
Q ss_pred HHHHHHHHhhC
Q 018318 322 AVALGNYLTGK 332 (358)
Q Consensus 322 ~~~l~~~L~~~ 332 (358)
+++|...|...
T Consensus 286 A~~l~~~l~~~ 296 (367)
T PF03841_consen 286 AERLAAQLKAA 296 (367)
T ss_dssp -----------
T ss_pred ccccccccccc
Confidence 77777777664
No 294
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.40 E-value=4.8e-11 Score=114.23 Aligned_cols=261 Identities=16% Similarity=0.092 Sum_probs=142.5
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCC--
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPH-- 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~g-- 121 (358)
+|.|.+++.+.+.... .....+ ..+...+++ ++++++.|.+. .+++++|++|+..++..+..++
T Consensus 57 ~p~v~~a~~~~~~~~~---~~~~~~--~~~~~~~la----~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~ 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKLI---HTSNLY--YIEPQEELA----EKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK 122 (396)
T ss_pred CHHHHHHHHHHHhhcc---cccccc--CCHHHHHHH----HHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence 4899999887764321 111111 123444444 77888887653 3667888999999998765433
Q ss_pred -----CeEEEecCCCCccccccccccCCccccccccee-EEeecccCCCCC----CCCHHHHHHHHhhcCCcEEEEcCCC
Q 018318 122 -----DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYF-ESLPYKVNSSTG----YIDYDKLEEKALDFRPKLIICGGSA 191 (358)
Q Consensus 122 -----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~----~id~~~l~~~l~~~~~~~v~~~~~~ 191 (358)
++|++..+.|.+.... .+...+... .....+.. .+. ..|++++++++.+ ++++|+++.++
T Consensus 123 ~~~~~~~ii~~~~~yhg~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~ 192 (396)
T PRK02627 123 KGIEKPEIITAENSFHGRTLA--------TLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITD-KTAAVMLEPIQ 192 (396)
T ss_pred cCCCCCeEEEECCCcCcccHH--------HHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCC-CeEEEEEeccc
Confidence 6788877665433110 011111100 00001111 011 2389999999853 68888886544
Q ss_pred CC---C---ccchHHHHHHHHHhCCEEEEechhhhhhhhccccC-C-CCC-cccEEEecCCccCC-CCCeeEEEEeCCCC
Q 018318 192 YP---R---DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA-N-PFE-YCHIVTTTTHKSLR-GPRAGMIFYRKGPK 261 (358)
Q Consensus 192 ~~---~---~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~-~-~~~-~~d~~~~s~~K~l~-g~~gG~i~~~~~~~ 261 (358)
++ . ...+++|.++|++||+++|+|++|. |+...+... . ..+ ..|++ +++|.++ |.+.|+++++++
T Consensus 193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~~~~G~rig~~~~~~~-- 267 (396)
T PRK02627 193 GEGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIM--TLAKGLGGGVPIGAVLAKEK-- 267 (396)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEE--EEcchhhCCcccEEEEEcHH--
Confidence 32 1 2248999999999999999999976 543322211 0 112 34654 5789885 456788888763
Q ss_pred CCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC--ceeee-
Q 018318 262 PPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG--YSLVT- 338 (358)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G--~~~~~- 338 (358)
+.+.+.......+.+ .+....++..++++.+.. +...++.+++.+++++.|.+.. +....
T Consensus 268 -------------~~~~~~~~~~~~t~~-~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 330 (396)
T PRK02627 268 -------------VADVFTPGDHGSTFG-GNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKE 330 (396)
T ss_pred -------------HHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 444333211111112 233334444445544322 2445666667777777666542 21111
Q ss_pred CCCcceEEEEEc
Q 018318 339 GGTENHLVLWDL 350 (358)
Q Consensus 339 ~~~~~~~~~v~~ 350 (358)
....+..+|+.+
T Consensus 331 ~~~~g~~~~i~~ 342 (396)
T PRK02627 331 VRGLGLMIGIEL 342 (396)
T ss_pred eccCcEEEEEEe
Confidence 113455677765
No 295
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.39 E-value=2.7e-11 Score=106.12 Aligned_cols=231 Identities=18% Similarity=0.205 Sum_probs=140.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCCeEEEec-CCCCccc-cccccccCCcccccc
Q 018318 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLD-LPSGGHL-THGYYTSGGKKISAT 150 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd~Vl~~~-~~~~~~~-~~~~~~~~~~~~~~~ 150 (358)
..++.|| +-.|+.||++... +-..+.|||.|+..++..+++|||+.+... ..|...- -.+.-......+.-.
T Consensus 65 ~GRdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~df 138 (416)
T COG4100 65 LGRDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDF 138 (416)
T ss_pred cchhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHh
Confidence 4566777 6688999999742 234567999999999999999999988644 1111000 000000000011123
Q ss_pred cceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC----CCC--CccchHHHHHHHHHh--CCEEEEechhhhhh
Q 018318 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS----AYP--RDWDYARFRAVADKC--GALLLCDMAHISGL 222 (358)
Q Consensus 151 g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~----~~~--~~~~l~~i~~la~~~--g~~lvvD~a~~~g~ 222 (358)
|+....+++ . .++.+|++.++..+.+ ++|+|.+.-| ..| .+.+++++.++.|+- +++++||.|.. .+
T Consensus 139 gi~Y~~v~L--t-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG-EF 213 (416)
T COG4100 139 GIKYKAVPL--T-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG-EF 213 (416)
T ss_pred Ccceeeccc--c-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch-hh
Confidence 444444444 3 3689999999999985 8898876433 223 234566777777765 79999999943 33
Q ss_pred hhccccCCCCC-cccEEEecCCccCCCC---CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-cCCCCcCCCChhHHH
Q 018318 223 VAAQEAANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-VFPSLQGGPHNHQIG 297 (358)
Q Consensus 223 ~~~~~~~~~~~-~~d~~~~s~~K~l~g~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 297 (358)
+-. ..|-. ++|++.+|+-|+-+|. .||++.++.+ +.+....+ ..|++.+.. -+
T Consensus 214 vE~---~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~---------------~ve~~~yRlTaPGIG~e~----Ga 271 (416)
T COG4100 214 VEE---KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAE---------------LVEAAAYRLTAPGIGREG----GA 271 (416)
T ss_pred hhc---cCccccchhhhccceeeCCCCceeeccceeechHH---------------HHHhhceeeecCCccccc----cc
Confidence 321 13444 9999999999986553 4788888874 44433221 223332110 01
Q ss_pred HHHHHHHHhccHHH---HHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 298 ALAVALKQASTPAF---KAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 298 al~~al~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
. ..+++++- +++ .+...+..+-+......|.+.|+++.+
T Consensus 272 t-~~~l~~my-qGlFlAPhvv~qa~Kga~fta~~le~lg~~~~P 313 (416)
T COG4100 272 T-LYSLREMY-QGLFLAPHVVSQAVKGAHFTARFLEKLGFPVNP 313 (416)
T ss_pred c-HHHHHHHH-hhhccchHHHHHHhhhhHHHHHHHHHcCCCCCC
Confidence 1 22333332 232 566777777788888888888998865
No 296
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.39 E-value=2.6e-11 Score=116.42 Aligned_cols=262 Identities=15% Similarity=0.097 Sum_probs=145.7
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc-----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~----- 118 (358)
+|+|.+++.+.+......+. ....+...+++ ++++++++.+. .++++||++|+..++....
T Consensus 58 ~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~----~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~~~ 123 (403)
T PRK05093 58 HPALVKALKEQGEKLWHISN-----VFTNEPALRLA----KKLIDATFAER-----VFFANSGAEANEAAFKLARRYACD 123 (403)
T ss_pred CHHHHHHHHHHHHhcCcccC-----ccCCHHHHHHH----HHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHHhh
Confidence 89999999887753221111 11223334554 67777776543 4678899999999987541
Q ss_pred ---CCCCeEEEecCCCCccccccccccCCcccccccce---eEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC
Q 018318 119 ---EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY---FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAY 192 (358)
Q Consensus 119 ---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~ 192 (358)
...++|+.....|.|...... ...+......+.. .....+ ...|++++++.+.+ ++++|+++. .+
T Consensus 124 ~~~~~~~~ii~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~d~~~l~~~l~~-~~aaiiiep-~~ 194 (403)
T PRK05093 124 RHGPEKTEIIAFHNSFHGRTLFTV-SVGGQPKYSDGFGPKPADITHV------PFNDLAAVKAVIDD-HTCAVVVEP-IQ 194 (403)
T ss_pred cCCCCCCeEEEEcCCcCCchhhhH-hhcCChhhhhcCCCCCCCcEEe------CCCCHHHHHHHhcC-CeEEEEEec-cc
Confidence 123467766654433211000 0000000000000 001111 13488999998864 678888873 33
Q ss_pred C---Cc----cchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C-cccEEEecCCccC-CCCCeeEEEEeCCC
Q 018318 193 P---RD----WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YCHIVTTTTHKSL-RGPRAGMIFYRKGP 260 (358)
Q Consensus 193 ~---~~----~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~-~~d~~~~s~~K~l-~g~~gG~i~~~~~~ 260 (358)
+ .. ..+++|.++|++||+++|+|++|. |+...+.. ... + ..|+ .|++|.+ +|.+.|+++++++
T Consensus 195 ~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~-~~~~~~~~~pdi--~s~sK~l~~G~rig~vv~~~~- 269 (403)
T PRK05093 195 GEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDL-FAYMHYGVTPDI--LTSAKALGGGFPIGAMLTTAE- 269 (403)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccc-hhhhhcCCCCCE--EEecccccCCcceEEEEEcHH-
Confidence 3 11 238999999999999999999976 65443321 111 2 3464 4678988 4567899998873
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCCce--eee
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYS--LVT 338 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~--~~~ 338 (358)
+.+.+.......+. +.+....++..++++.+.. +...++.+++.+++.+.|++.+.+ +..
T Consensus 270 --------------i~~~l~~~~~~~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 331 (403)
T PRK05093 270 --------------IASHFKVGTHGSTY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFS 331 (403)
T ss_pred --------------HHhhcCCCCCCCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 44444332111222 2233344444555655432 345677888889999999876422 211
Q ss_pred -CCCcceEEEEEcC
Q 018318 339 -GGTENHLVLWDLR 351 (358)
Q Consensus 339 -~~~~~~~~~v~~~ 351 (358)
....+..+|+.+.
T Consensus 332 ~~~~~G~~~~~~l~ 345 (403)
T PRK05093 332 EIRGMGLLIGAELK 345 (403)
T ss_pred eEeeCceEEEEEec
Confidence 1133455666653
No 297
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.37 E-value=4.8e-11 Score=114.60 Aligned_cols=243 Identities=19% Similarity=0.164 Sum_probs=142.1
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc-----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~----- 118 (358)
+|.|.+|+.+.+...... +..+ ..+...+++ ++++++++.+. .++++||++|+..++....
T Consensus 57 ~p~v~~A~~~~~~~~~~~---~~~~--~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~~ 122 (406)
T PRK12381 57 HPALREALNEQASKFWHT---GNGY--TNEPVLRLA----KKLIDATFADR-----VFFCNSGAEANEAALKLARKYAHD 122 (406)
T ss_pred CHHHHHHHHHHHhhcccc---cCcc--CCHHHHHHH----HHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHhh
Confidence 799999998887532211 1111 123333454 77888776543 4667899999999988752
Q ss_pred ---CCCCeEEEecCCCCccccccccccCCcccccccce-eE--Eeecc--cCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 018318 119 ---EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FE--SLPYK--VNSSTGYIDYDKLEEKALDFRPKLIICGGS 190 (358)
Q Consensus 119 ---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~--~~~~~--~~~~~~~id~~~l~~~l~~~~~~~v~~~~~ 190 (358)
.++.+|+.....|.|... + .+.+.+.. .. ..++. +. .....|++++++.+++ ++++|+++ |
T Consensus 123 ~~~~~r~~ii~~~~~yHG~t~-~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~aaviiE-P 191 (406)
T PRK12381 123 RYGSHKSGIVAFKNAFHGRTL-F-------TVSAGGQPKYSQDFAPLPPDIR-HAAYNDLNSASALIDD-QTCAVIVE-P 191 (406)
T ss_pred cCCCCCCeEEEECCCcCCcch-h-------HHhhcCCcccccCCCCCCCCee-EeCCCCHHHHHHhccC-CeeEEEEe-C
Confidence 135678887766554321 1 11111110 00 00000 00 0124688999998864 67888876 4
Q ss_pred CCC-------CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCC--CCC-cccEEEecCCccC-CCCCeeEEEEeCC
Q 018318 191 AYP-------RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSL-RGPRAGMIFYRKG 259 (358)
Q Consensus 191 ~~~-------~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~--~~~-~~d~~~~s~~K~l-~g~~gG~i~~~~~ 259 (358)
.++ ....+++|.++|++||+++|+|++| .|+...+.... ..+ ..|+ .+++|.+ +|.+.|++++++
T Consensus 192 v~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~gG~~ig~~~~~~- 267 (406)
T PRK12381 192 IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDV--LTTAKALGGGFPIGAMLTTE- 267 (406)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCE--EEehhhhhCCCceEEEEEcH-
Confidence 333 1345889999999999999999998 56543332110 112 3565 4778998 455678888877
Q ss_pred CCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
++.+.+.......+.+ .++...++..++++.+.. +...++++++.+++.+.|++.+
T Consensus 268 --------------~~~~~~~~~~~~~t~~-~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~ 323 (406)
T PRK12381 268 --------------KCASVMTVGTHGTTYG-GNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTIN 323 (406)
T ss_pred --------------HHHhhcCCCCCCCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHH
Confidence 3444443322222222 233344444555655432 3567778888899999888764
No 298
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.34 E-value=5.6e-10 Score=104.19 Aligned_cols=267 Identities=20% Similarity=0.148 Sum_probs=153.4
Q ss_pred cceeEeccCCCC-----CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASENFT-----SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~~~~-----~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
++|..+.+-.++ +|.|.+|+.+.+......|. +...++ +..+.+.+++..-+ . .-+++||
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~---------Pte~Ei--~~Aell~~~~p~~e--~--vrfvnSG 118 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGA---------PTELEV--ELAELLIERVPSIE--K--VRFVNSG 118 (432)
T ss_pred EeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCC---------CCHHHH--HHHHHHHHhcCccc--E--EEEecch
Confidence 456666554443 79999999988865443222 222233 35577888887632 1 2345889
Q ss_pred hHHHHHHHHhh--cCCCCeEEEecCCCCccccccccccC-C----cccccccceeEEeecccCCCC---CCCCHHHHHHH
Q 018318 107 SPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSG-G----KKISATSIYFESLPYKVNSST---GYIDYDKLEEK 176 (358)
Q Consensus 107 t~a~~~~l~a~--~~~gd~Vl~~~~~~~~~~~~~~~~~~-~----~~~~~~g~~~~~~~~~~~~~~---~~id~~~l~~~ 176 (358)
|+|...++... ....|+|+....+|.+|......... | ......|. +-++...+ ...|++.++++
T Consensus 119 TEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gv-----p~~~a~~ti~~~yND~~al~~~ 193 (432)
T COG0001 119 TEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGV-----PADVAKHTLVLPYNDLEALEEA 193 (432)
T ss_pred hHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCC-----ChhhhccEEEecCCCHHHHHHH
Confidence 99998888765 34568999999888777543221100 0 00001111 10100000 14789999999
Q ss_pred Hhhc--CCcEEEEcC--CCCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhc-cccCCCCC-cccEEEecCCccC
Q 018318 177 ALDF--RPKLIICGG--SAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAA-QEAANPFE-YCHIVTTTTHKSL 246 (358)
Q Consensus 177 l~~~--~~~~v~~~~--~~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~-~~~~~~~~-~~d~~~~s~~K~l 246 (358)
+++. +...|++.. .+.+.+.| ++.|.++|++||+++|.|+.+. |+-.. +....-+. ..|+ +++.|.+
T Consensus 194 ~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViT-GFR~~~gGaq~~~gi~PDl--ttlGKiI 270 (432)
T COG0001 194 FEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVIT-GFRVALGGAQGYYGVEPDL--TTLGKII 270 (432)
T ss_pred HHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchh-hcccCCcccccccCcCcch--hhhhhhh
Confidence 9875 456677764 23444333 7899999999999999999853 43221 11111122 3465 4567988
Q ss_pred C-CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCC--CChhHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 018318 247 R-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGG--PHNHQIGALAVALKQASTPAFKAYAKQVKANAV 323 (358)
Q Consensus 247 ~-g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 323 (358)
+ |.+.|++.++++ +.+.+...-..+..|+ .++..++|-.++++.+... +...+++.+..+
T Consensus 271 GGGlP~ga~gGr~e---------------iM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~--~~~y~~l~~~~~ 333 (432)
T COG0001 271 GGGLPIGAFGGRAE---------------IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE--EGVYERLDALGE 333 (432)
T ss_pred cCCcceeeeccHHH---------------HHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc--ccHHHHHHHHHH
Confidence 5 557788888874 5554443221111121 2334455545566655421 124666777777
Q ss_pred HHHHHHhh----CCceeee
Q 018318 324 ALGNYLTG----KGYSLVT 338 (358)
Q Consensus 324 ~l~~~L~~----~G~~~~~ 338 (358)
+|++.|++ .|+++..
T Consensus 334 ~L~~gl~~~~~~~g~~~~v 352 (432)
T COG0001 334 RLAEGLRAAAERHGIPLTV 352 (432)
T ss_pred HHHHHHHHHHHHhCCCeEE
Confidence 77777765 4776644
No 299
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.33 E-value=2.1e-10 Score=110.87 Aligned_cols=198 Identities=19% Similarity=0.110 Sum_probs=115.5
Q ss_pred cceeEeccC--C---CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASE--N---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~--~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+..+- . ..+|.|.+|+.+.+.... .+. ...+...+ .++++++.+.... -.++++||
T Consensus 49 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~-----~~~~~~~~----lae~l~~~~~~~~----~v~~~~sG 113 (423)
T TIGR00713 49 EYIDYVLSWGPLILGHAHPRVVEAVKEALERGT--SYG-----APTEAEIL----LAKEIISRVPSVE----MVRFVNSG 113 (423)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC--cCC-----CCCHHHHH----HHHHHHHhCCccc----EEEEeCCH
Confidence 456666542 2 348999999988875422 111 11122223 3467777765432 23567889
Q ss_pred hHHHHHHHHhh--cCCCCeEEEecCCCCccccccccccCCcccccccce---------------eEEeecccCCCCCCCC
Q 018318 107 SPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY---------------FESLPYKVNSSTGYID 169 (358)
Q Consensus 107 t~a~~~~l~a~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------------~~~~~~~~~~~~~~id 169 (358)
++|+..++... ...+++|++..+.|.+...... .+...+.. .....++ ..|
T Consensus 114 seA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d 181 (423)
T TIGR00713 114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALL------VKAGSGAATLGLPTSPGVPEDFAKLTLVLP------YND 181 (423)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhh------ccccCcccccCCCCCCCCCcccccceEEeC------CCC
Confidence 99999988764 2356899998877665421000 00000000 0001111 238
Q ss_pred HHHHHHHHhh--cCCcEEEEc-CCCC-CCccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc-CCCCC-cccEEE
Q 018318 170 YDKLEEKALD--FRPKLIICG-GSAY-PRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANPFE-YCHIVT 239 (358)
Q Consensus 170 ~~~l~~~l~~--~~~~~v~~~-~~~~-~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-~~~~~-~~d~~~ 239 (358)
++++++++++ .++++|++. .+++ |...+ +++|.++|++||+++|+|++| .|+...... ...++ ..|++
T Consensus 182 ~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~-~g~r~g~~~~~~~~~~~pDi~- 259 (423)
T TIGR00713 182 LEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM-TGFRVALGGAQEYFGVEPDLT- 259 (423)
T ss_pred HHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc-cccccCcchhHHHhCCCcchh-
Confidence 9999999874 246777775 3333 43333 789999999999999999997 455321100 01112 34654
Q ss_pred ecCCccCC-CCCeeEEEEeCC
Q 018318 240 TTTHKSLR-GPRAGMIFYRKG 259 (358)
Q Consensus 240 ~s~~K~l~-g~~gG~i~~~~~ 259 (358)
+++|.++ |.+.|+++++++
T Consensus 260 -t~sK~l~~G~pig~v~~~~~ 279 (423)
T TIGR00713 260 -TLGKIIGGGLPVGAFGGRRE 279 (423)
T ss_pred -hhhhhhcCCCceeeeeEHHH
Confidence 6899985 567899998873
No 300
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.31 E-value=2.7e-10 Score=108.76 Aligned_cols=271 Identities=16% Similarity=0.086 Sum_probs=144.6
Q ss_pred cceeEecc--CCCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+.+..+ .+.+ +|+|.+|+.+.+..-. .++. .++ .+.+....+++.+..+.+. .++++||
T Consensus 37 ~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~-~~~~--~~~------~~~~~~la~~l~~~~~~~~-----v~f~~SG 102 (395)
T PRK03715 37 RYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLI-NPSP--AFY------NEPMAKLAGLLTQHSCFDK-----VFFANSG 102 (395)
T ss_pred EEEECCcChhhccCCCCCHHHHHHHHHHHHhcc-cccc--ccc------CHHHHHHHHHHhhccCCCE-----EEEeCCc
Confidence 34555542 3333 7999999988764321 1111 111 1233233455555443332 4678899
Q ss_pred hHHHHHHHHhhc------CCC-CeEEEecCCCCccccccccccCCcccccccce-eEEeecccCC---CCCCCCHHHHHH
Q 018318 107 SPANFAAYTAVL------EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNS---STGYIDYDKLEE 175 (358)
Q Consensus 107 t~a~~~~l~a~~------~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~---~~~~id~~~l~~ 175 (358)
++|+..++..+. ++| .+|++....|.+.... .+.+.+.. ......+... .....|++++++
T Consensus 103 seA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 174 (395)
T PRK03715 103 AEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLA--------TMSASGKPGWDTIFAPQVPGFPKAELNDIASVEK 174 (395)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHH--------HHhhcCCcccccCCCCCCCCceeeCCchHHHHHH
Confidence 999999988774 123 5677776544332110 11222211 0000000000 011357899999
Q ss_pred HHhhcCCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccC
Q 018318 176 KALDFRPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSL 246 (358)
Q Consensus 176 ~l~~~~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l 246 (358)
++++ ++.+|+++.. ..|...+ +++|.++|++||+++|+|++|. |+...+... ..++ ..|++++ .|.|
T Consensus 175 ~l~~-~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t~--gK~l 250 (395)
T PRK03715 175 LITD-KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMTL--GKGI 250 (395)
T ss_pred HcCC-CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceeee--hhhh
Confidence 8864 6777887643 2233334 8999999999999999999986 543223210 1122 5687554 6998
Q ss_pred CC-CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 018318 247 RG-PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVAL 325 (358)
Q Consensus 247 ~g-~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l 325 (358)
+| .+.|.++++++ +....... ...+.+ .++...++..++++.+.+ +...++.+++.++|
T Consensus 251 g~G~p~~av~~~~~---------------i~~~~~~~-~~~T~~-g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l 310 (395)
T PRK03715 251 GGGVPLAALLAKAE---------------VAVFEAGD-QGGTYN-GNPLMTAVGVAVISQLLA---PGFLEGVRARGEYL 310 (395)
T ss_pred hCCcceEEEEEccc---------------cccccCCC-cCCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHH
Confidence 64 34566677664 21111111 111112 233334444455655532 35677788888888
Q ss_pred HHHHhhC----CceeeeCCCcceEEEEEc
Q 018318 326 GNYLTGK----GYSLVTGGTENHLVLWDL 350 (358)
Q Consensus 326 ~~~L~~~----G~~~~~~~~~~~~~~v~~ 350 (358)
++.|++. ++.-.. ..+..+-|.+
T Consensus 311 ~~~L~~l~~~~~i~~vr--G~Glm~~i~l 337 (395)
T PRK03715 311 KEKLLELSEERGLEGER--GEGLLRALLL 337 (395)
T ss_pred HHHHHHHhhcCCcCeEE--cceeEEEEEe
Confidence 8888753 443222 3445555554
No 301
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.30 E-value=1.8e-10 Score=106.42 Aligned_cols=257 Identities=19% Similarity=0.154 Sum_probs=146.0
Q ss_pred hcceeEeccC--CCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC-CCCCCCCcccccc
Q 018318 31 CRGIELIASE--NFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-LDPTQWGVNVQPY 104 (358)
Q Consensus 31 ~~~~~l~a~~--~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g-~~~~~~~~~v~~~ 104 (358)
+++|.+.++- +.+ +|.+.+|+.+....-+.. +..|+. +...+| .++|.++.+ .+. .++++
T Consensus 42 ~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~---sn~~~~--~~~~~l----a~~L~~~s~~~d~-----vff~N 107 (404)
T COG4992 42 REYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHV---SNLFYN--EPQAEL----AEKLVELSPFADR-----VFFCN 107 (404)
T ss_pred CEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhc---ccccCC--hHHHHH----HHHHHhhCccccE-----EEEcC
Confidence 3567777642 222 899999998876544322 222222 333333 367888876 333 46678
Q ss_pred CChHHHHHHHHhhcC----C-CCeEEEecCCCCccccccccccCCcccccccce-eEEeecccCCC---CCCCCHHHHHH
Q 018318 105 SGSPANFAAYTAVLE----P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSS---TGYIDYDKLEE 175 (358)
Q Consensus 105 sGt~a~~~~l~a~~~----~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~---~~~id~~~l~~ 175 (358)
||++|+++++....+ | .-+|+.....++|.- .+ .++..+.. .+-.+.+.-+. -..-|++++++
T Consensus 108 SGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT-~g-------alS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ 179 (404)
T COG4992 108 SGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRT-LG-------ALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEA 179 (404)
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCcc-ce-------eeeccCChhhccCCCCCCCCceecCCCCHHHHHH
Confidence 999999999987632 2 237777776554431 11 12222211 00000011000 12468999999
Q ss_pred HHhhcCCcEEEEcCC--CCCCc-cc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccC
Q 018318 176 KALDFRPKLIICGGS--AYPRD-WD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSL 246 (358)
Q Consensus 176 ~l~~~~~~~v~~~~~--~~~~~-~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l 246 (358)
++.+ ++.+|++... ..|.+ .+ ++++.++|++||+++|.|+.|. |+...|.+. .-.. ..||++ +-|.|
T Consensus 180 ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~fA~e~~gV~PDI~t--laK~L 255 (404)
T COG4992 180 AIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLFAYEHYGVEPDILT--LAKAL 255 (404)
T ss_pred Hhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-CCCccchHHHHHHhCCCCCEEE--eeccc
Confidence 9987 7888888743 23322 12 7899999999999999999985 554433221 0011 457754 56888
Q ss_pred CC-CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 018318 247 RG-PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVAL 325 (358)
Q Consensus 247 ~g-~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l 325 (358)
+| .+-|.+++++. +.+.+.......+.| .++...++..++++.+.++ ...++.++..++|
T Consensus 256 gGG~PigA~la~~~---------------~~~~~~~G~HgSTfG-GNpLacAv~~a~l~~l~~e---~ll~~v~~~g~~~ 316 (404)
T COG4992 256 GGGFPIGAMLATEE---------------IASAFTPGDHGSTFG-GNPLACAVALAVLEVLLEE---GLLENVREKGEYL 316 (404)
T ss_pred cCCccceeeEEchh---------------hhhcCCCCcccCCCC-cCHHHHHHHHHHHHHHcch---hHHHHHHHHHHHH
Confidence 54 45566666552 333233222222222 2444455555667776654 4456667777888
Q ss_pred HHHHhhC
Q 018318 326 GNYLTGK 332 (358)
Q Consensus 326 ~~~L~~~ 332 (358)
.+.|+++
T Consensus 317 ~~~L~~l 323 (404)
T COG4992 317 LQRLREL 323 (404)
T ss_pred HHHHHHH
Confidence 8888774
No 302
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.29 E-value=3.6e-11 Score=110.00 Aligned_cols=257 Identities=17% Similarity=0.160 Sum_probs=149.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc---CCC----------CeEEEecCCCCccccccc
Q 018318 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---EPH----------DRIMGLDLPSGGHLTHGY 139 (358)
Q Consensus 73 ~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~---~~g----------d~Vl~~~~~~~~~~~~~~ 139 (358)
+.....|+++-.++.++.|.+... ..++..+|+-+|..++.+.. -|+ +-|+..+- .+|+|..
T Consensus 137 PvF~lmE~~vl~km~~ivGw~~~~--DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSe--esHYSi~- 211 (510)
T KOG0629|consen 137 PVFVLMEEEVLAKMREIVGWEEGG--DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSE--ESHYSIK- 211 (510)
T ss_pred ceEEeehHHHHHHHHHHhCCCCCC--CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecc--cchhhHH-
Confidence 333456666778888999998742 24666677766766665442 122 23333332 3566543
Q ss_pred cccCCcccccccceeE-EeecccCCCCCCCCHHHHHHHHhhcC-----CcEEEE--cCCCCCCccchHHHHHHHHHhCCE
Q 018318 140 YTSGGKKISATSIYFE-SLPYKVNSSTGYIDYDKLEEKALDFR-----PKLIIC--GGSAYPRDWDYARFRAVADKCGAL 211 (358)
Q Consensus 140 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~id~~~l~~~l~~~~-----~~~v~~--~~~~~~~~~~l~~i~~la~~~g~~ 211 (358)
+...+.|.+.. ++.++.+ +.|.+++++||++|.+.+ |-.|.+ +++..|.-.||+.|+++|++|+.|
T Consensus 212 -----kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lW 285 (510)
T KOG0629|consen 212 -----KAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLW 285 (510)
T ss_pred -----HHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEE
Confidence 22234453322 2334544 578999999999986543 334432 334566678999999999999999
Q ss_pred EEEechhhhhhhhccccCCCCC---cccEEEecCCccCCCC-CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh---cC
Q 018318 212 LLCDMAHISGLVAAQEAANPFE---YCHIVTTTTHKSLRGP-RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA---VF 284 (358)
Q Consensus 212 lvvD~a~~~g~~~~~~~~~~~~---~~d~~~~s~~K~l~g~-~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 284 (358)
++||+|-+.|+..+..+...+. .+|.++-++||+++.| +++.++++.+-. +.. .+... ..+.-.-++. .+
T Consensus 286 mHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gl-l~~-Cn~~~-A~YLFq~dK~YdvS~ 362 (510)
T KOG0629|consen 286 MHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGL-LQR-CNQMS-AIYLFQQDKFYDVSY 362 (510)
T ss_pred EEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHH-HHh-hcccc-hhhhhccCceeeccc
Confidence 9999997666666544433333 7899999999998765 566666655310 000 00000 0000000000 00
Q ss_pred -CC---CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcce
Q 018318 285 -PS---LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENH 344 (358)
Q Consensus 285 -~~---~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~ 344 (358)
.+ .+-+.... +--++..++.-...++++.++++.++++||.+.|++. |+.......+.|
T Consensus 363 DTgdK~iQCGRh~D-~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~ 426 (510)
T KOG0629|consen 363 DTGDKAIQCGRHVD-VFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEH 426 (510)
T ss_pred ccccchhhcCcccc-HHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCce
Confidence 00 11111111 1224555555555678999999999999999999998 555544333333
No 303
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.28 E-value=8.6e-10 Score=104.85 Aligned_cols=258 Identities=16% Similarity=0.118 Sum_probs=136.2
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|+|++|+.+.+.... .++. . ....++ ..+++.+...... ..++++||++|+..++.... ..+
T Consensus 46 ~p~v~~a~~~~~~~~~--~~~~-~------~~~~~~----~~la~~l~~~~~~--~~~~~~SGseA~~~Al~~ar~~~~~ 110 (375)
T PRK04260 46 HPQVQQALQKQAGLIW--HSPN-L------YLNSLQ----EEVAQKLIGDKDY--LAFFCNSGAEANEAAIKIARKATGK 110 (375)
T ss_pred CHHHHHHHHHHHHhcC--cccC-c------cCCHHH----HHHHHHHhcCcCC--EEEEcCccHHHHHHHHHHHHHhcCC
Confidence 7899999998875422 1211 1 112333 3455544333221 23567889999998887762 456
Q ss_pred CeEEEecCCCCccccccccccCCcccccccce-----eEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC--CCC
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-----FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA--YPR 194 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~--~~~ 194 (358)
++|++....|.+..... +...+.. +......+. .....|++++++++.+ ++.+|+++... .|.
T Consensus 111 ~~vv~~~~~yHg~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~ 180 (375)
T PRK04260 111 QEIITFQNSFHGRTFGS--------MSATGQDKIKDGFGDGVPHFS-YAIFNDLNSVKALVNK-NTAAVMLELVQGESGV 180 (375)
T ss_pred CeEEEECCCcCcccHHH--------HhccCCcccCCCCCCCCCCeE-EeCCCCHHHHHHhcCC-CeEEEEECCeECCCCC
Confidence 78888766543321111 1111110 000000000 0013589999998854 56777776433 233
Q ss_pred cc----chHHHHHHHHHhCCEEEEechhhhhhhhccccCC--CCC-cccEEEecCCccCC-CCCeeEEEEeCCCCCCCCC
Q 018318 195 DW----DYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKG 266 (358)
Q Consensus 195 ~~----~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~--~~~-~~d~~~~s~~K~l~-g~~gG~i~~~~~~~~~~~~ 266 (358)
.. .+++|.++|+++|+++++|++|. |+...+.... ..+ ..|++ |++|.|+ |.+.|+++++++
T Consensus 181 ~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~------- 250 (375)
T PRK04260 181 LPADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSS------- 250 (375)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHH-------
Confidence 22 38999999999999999999974 6533332111 112 45654 7899985 557799888873
Q ss_pred CCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh----CC-ceeeeCCC
Q 018318 267 QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG----KG-YSLVTGGT 341 (358)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~G-~~~~~~~~ 341 (358)
+.+.+.......+.+ .+....++..++++.... +.+.++.++..+++++.|.+ .+ +.... .
T Consensus 251 --------~~~~~~~~~~~~t~~-~~~~~~~aa~a~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~ 316 (375)
T PRK04260 251 --------LGGAFGYGSHGSTFG-GNKLSMAAASATLDIMLT---AGFLEQALENGNYLQEQLQKALQDKETVTTVR--G 316 (375)
T ss_pred --------HHhhcCCCCCCCCCC-cCHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe--c
Confidence 334333211111111 222334444445544432 23445555556665555544 33 22222 2
Q ss_pred cceEEEEEc
Q 018318 342 ENHLVLWDL 350 (358)
Q Consensus 342 ~~~~~~v~~ 350 (358)
....+|+.+
T Consensus 317 ~g~~~~~~~ 325 (375)
T PRK04260 317 LGYMIGIET 325 (375)
T ss_pred cceEEEEEe
Confidence 456677765
No 304
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.26 E-value=4.2e-10 Score=101.12 Aligned_cols=270 Identities=17% Similarity=0.183 Sum_probs=160.2
Q ss_pred cCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc
Q 018318 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL 118 (358)
Q Consensus 39 ~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~ 118 (358)
+.+.++..-..||..- .+.|.+++. ...|. +.+++.||.+. .+.+.-|-.|-...+..++
T Consensus 56 GTgams~~qwaamm~G-----DEAYagsrs------~~~L~----~avkdifGfq~-----~iPthQGRgAE~Il~~i~i 115 (471)
T COG3033 56 GTGAMTDKQWAAMMRG-----DEAYAGSRS------YYALA----DAVKDIFGFQY-----TIPTHQGRGAENILIPILI 115 (471)
T ss_pred CcccccHHHHHHHhcc-----chhhccccc------HHHHH----HHHHHhcCcee-----eeeccCCccHHHHHHHHHh
Confidence 4555677666665422 123444432 22444 66788999876 3556677777776677777
Q ss_pred CCCCeE-----EEecCCCCccccccccccCCcccccccceeEEeec------ccCCC-CCCCCHHHHHHHHhhcCCc---
Q 018318 119 EPHDRI-----MGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY------KVNSS-TGYIDYDKLEEKALDFRPK--- 183 (358)
Q Consensus 119 ~~gd~V-----l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~-~~~id~~~l~~~l~~~~~~--- 183 (358)
++|+.+ ++++. .||... ++ -.+..|+...-++. .++.. .|.+|+++|+++|++..+.
T Consensus 116 k~~~~~pg~~~~~~sN---~~FdTT----r~-h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp 187 (471)
T COG3033 116 KKGEQEPGSKMVAFSN---YHFDTT----RG-HIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVP 187 (471)
T ss_pred hhccccCCcccccccc---ceecch----hH-HHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCc
Confidence 655544 33332 233211 00 01122221111111 11100 3689999999999875432
Q ss_pred EEEEc---CCCCCCc---cchHHHHHHHHHhCCEEEEechhhhhhhhc------cccCCCC--------CcccEEEecCC
Q 018318 184 LIICG---GSAYPRD---WDYARFRAVADKCGALLLCDMAHISGLVAA------QEAANPF--------EYCHIVTTTTH 243 (358)
Q Consensus 184 ~v~~~---~~~~~~~---~~l~~i~~la~~~g~~lvvD~a~~~g~~~~------~~~~~~~--------~~~d~~~~s~~ 243 (358)
.|++. ++..|.+ ..++++.+||++||+.++.|+|....-.+. +...+.+ +++|-++.|+-
T Consensus 188 ~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~K 267 (471)
T COG3033 188 YIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAK 267 (471)
T ss_pred EEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecc
Confidence 34333 3333433 357899999999999999999876532221 1111222 27899999999
Q ss_pred ccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-----cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHH
Q 018318 244 KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-----VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQV 318 (358)
Q Consensus 244 K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~ 318 (358)
|--..+-||+++.+++- . +++-...+.. -++. .|+.....+.+++..|.+..+ ..|+++.
T Consensus 268 KD~lvnmGGfl~~~D~~---------~--fDvy~~~~~~~V~~eG~~t-YGgl~GrdmealAvGL~e~~~---~~yl~~R 332 (471)
T COG3033 268 KDGLVNMGGFLCFKDDS---------F--FDVYEECRTLVVVQEGFPT-YGGLAGRDMEALAVGLREGVN---FDYLAHR 332 (471)
T ss_pred ccceeccccEEEecCcc---------H--HHHHHHHHhheEeeccccc-cCcccchhHHHHHHHHHHhcC---cHHHHHH
Confidence 96445678999998861 0 0122222211 1222 344555667788888887654 3556666
Q ss_pred HHHHHHHHHHHhhCCceeeeCCCcceEEEEEcCC
Q 018318 319 KANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 319 ~~~~~~l~~~L~~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
.+..+||.+.|.+.|+++.. +..+|-+.||...
T Consensus 333 v~Qv~YL~~~l~~~GVpi~~-paGGHavfvda~~ 365 (471)
T COG3033 333 VAQVQYLADGLEEAGVPIVQ-PAGGHAVFVDAGK 365 (471)
T ss_pred HHHHHHHHHHHHhcCCeeEe-cCCCceEEeehhh
Confidence 66789999999999999886 6789999999863
No 305
>PRK12403 putative aminotransferase; Provisional
Probab=99.24 E-value=1.1e-09 Score=106.49 Aligned_cols=247 Identities=15% Similarity=0.080 Sum_probs=126.0
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYY-GGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~-~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~---- 118 (358)
+|+|.+|+.+.+.. ...+. ..+ ...+...+++ ++|+++++...+ ..++++||++|+..++....
T Consensus 72 hp~v~~A~~~q~~~-~~~~~---~~~~~~~~~~~~la----e~L~~~~p~~~~---~v~f~~SGseA~e~AiklAr~~~~ 140 (460)
T PRK12403 72 RKDLAAAAARQMEQ-LPYYN---MFFHTTHPAVIELS----ELLFSLLPGHYS---HAIYTNSGSEANEVLIRTVRRYWQ 140 (460)
T ss_pred CHHHHHHHHHHHHh-CCCee---cccccCCHHHHHHH----HHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 79999999888754 22111 111 1223334454 778888763322 24667899999999988763
Q ss_pred ---CCCCeEE-EecCCCCccccccccccCCcccccccce-----------eEEeecccCC-CCCC--------CCHHHHH
Q 018318 119 ---EPHDRIM-GLDLPSGGHLTHGYYTSGGKKISATSIY-----------FESLPYKVNS-STGY--------IDYDKLE 174 (358)
Q Consensus 119 ---~~gd~Vl-~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~~-~~~~--------id~~~l~ 174 (358)
++++.++ .....|.+... + .+.+.+.. +..++.+... .... .+.++++
T Consensus 141 ~~g~~~r~~ii~~~~~yHG~t~-~-------~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le 212 (460)
T PRK12403 141 VLGKPQKKIMIGRWNGYHGSTL-A-------ATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLE 212 (460)
T ss_pred hhCCCCCcEEEEECCCcCcccH-h-------hhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHH
Confidence 2334444 33333333211 0 11111110 1111111000 0000 1135666
Q ss_pred HHHhh---cCCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecC
Q 018318 175 EKALD---FRPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTT 242 (358)
Q Consensus 175 ~~l~~---~~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~ 242 (358)
+.+.+ .++.+|++... ..|...+ +++|.++|++||+++|+|++|. |+...+... ..++ ..|+++ +
T Consensus 213 ~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~--~ 289 (460)
T PRK12403 213 EKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG-GFGRTGEWFAHEHFGFEPDTLS--I 289 (460)
T ss_pred HHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhhhhhcCCCCCeEE--E
Confidence 66643 23456776632 2344444 8999999999999999999983 442222211 1122 468886 6
Q ss_pred CccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh--c--CCCCcCCCChhHHHHHHHHHHHhccHHHHHHHH
Q 018318 243 HKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA--V--FPSLQGGPHNHQIGALAVALKQASTPAFKAYAK 316 (358)
Q Consensus 243 ~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~ 316 (358)
.|.|+|. +.|.+++++ ++.+.+... . +..+.+ .++...++..++|+.+.++ ...+
T Consensus 290 gK~lggG~~Piga~v~~~---------------~i~~~~~~~~~~~~~~~T~~-gnPl~~Aaala~L~~i~~~---~l~~ 350 (460)
T PRK12403 290 AKGLTSGYVPMGGLVLSK---------------RIAEALVEQGGVFAHGLTYS-GHPVAAAVAIANLKALRDE---GVVT 350 (460)
T ss_pred cccccccccceEEEEECH---------------HHHHHHhcCCCccccCCCCC-CCHHHHHHHHHHHHHHHhc---cHHH
Confidence 8988532 344444655 344433211 1 111111 2334445545566665432 3455
Q ss_pred HHH-HHHHHHHHHHhh
Q 018318 317 QVK-ANAVALGNYLTG 331 (358)
Q Consensus 317 ~~~-~~~~~l~~~L~~ 331 (358)
+.. ++.++|++.|++
T Consensus 351 ~~~~~~g~~l~~~L~~ 366 (460)
T PRK12403 351 RVKDDTGPYLQRCLRE 366 (460)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 664 667777777654
No 306
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.21 E-value=1.4e-09 Score=105.41 Aligned_cols=256 Identities=15% Similarity=0.054 Sum_probs=133.5
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|+|.+|+.+.+.. ...+..+. + ..+...++. ++|++++.-..+ ..++++||++|+..++.... ...
T Consensus 61 ~p~v~~a~~~q~~~-~~~~~~~~-~--~~~~~~~la----~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~tgr 129 (433)
T PRK08117 61 HPKVVQAIKEQADK-LMHGPSGV-I--YYESILKLA----EELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVTKR 129 (433)
T ss_pred CHHHHHHHHHHHHh-ccCccccc-c--CCHHHHHHH----HHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhcCC
Confidence 79999999888753 21111111 1 123333444 778887731111 23555799999999987642 223
Q ss_pred CeEEEecCCCCccccccc-cccCCccccc-c---cceeEEeecccCCC--CC-------CCCHHHHHHHHhh----cCCc
Q 018318 122 DRIMGLDLPSGGHLTHGY-YTSGGKKISA-T---SIYFESLPYKVNSS--TG-------YIDYDKLEEKALD----FRPK 183 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~-~~~~~~~~~~-~---g~~~~~~~~~~~~~--~~-------~id~~~l~~~l~~----~~~~ 183 (358)
.+|+.....|.|...... .+........ . ..++..++++.... .+ ..|++++++++++ .++.
T Consensus 130 ~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a 209 (433)
T PRK08117 130 PYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVA 209 (433)
T ss_pred CeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEE
Confidence 567776654433210000 0000000000 0 00011122210000 00 1266778887753 2355
Q ss_pred EEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCC-CCCeeE
Q 018318 184 LIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GPRAGM 253 (358)
Q Consensus 184 ~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~-g~~gG~ 253 (358)
+|+++.. +.|...+ +++|.++|++||+++|+|++|. |+...+... ..++ ..|+ .+++|.++ |.+.|+
T Consensus 210 avi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~piga 286 (433)
T PRK08117 210 AVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKGIASGLPLSA 286 (433)
T ss_pred EEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhhccCCCccee
Confidence 6676632 2344445 9999999999999999999987 653333211 1112 3465 58899985 455677
Q ss_pred EEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++++++ +.+.+.......+. +.++..+++..++++.+.. +...+++.++.+++++.|++.
T Consensus 287 v~~~~~---------------i~~~~~~~~~~~T~-~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l 346 (433)
T PRK08117 287 VVASKE---------------LMEQWPLGSHGTTF-GGNPVACAAALATLEVIKE---EKLLDNANEMGAYALERLEVL 346 (433)
T ss_pred EEEcHH---------------HHhhccCCCCCCCC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 777763 44333222122222 2244445555566665532 245666777778888877764
No 307
>PLN02624 ornithine-delta-aminotransferase
Probab=99.20 E-value=2.6e-09 Score=104.39 Aligned_cols=239 Identities=17% Similarity=0.109 Sum_probs=131.5
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~---- 119 (358)
+|.|.+|+.+.+.. .. ..+..+. .+...+|+ ++++++++.+. .++++||++|+..++.....
T Consensus 93 ~p~v~~ai~~ql~~-~~--~~~~~~~--~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~ 158 (474)
T PLN02624 93 HPKIIKALTEQAEK-LT--LSSRAFY--NDKFPEFA----EYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE 158 (474)
T ss_pred CHHHHHHHHHHHHh-cC--CcccccC--CHHHHHHH----HHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence 89999999988754 22 1111221 23333454 67888887553 36678999999999864431
Q ss_pred ----C-CC-eEEEecCCCCccccccccccCCcccccccce-e---------EEeecccCCCCCCCCHHHHHHHHhhc--C
Q 018318 120 ----P-HD-RIMGLDLPSGGHLTHGYYTSGGKKISATSIY-F---------ESLPYKVNSSTGYIDYDKLEEKALDF--R 181 (358)
Q Consensus 120 ----~-gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~---------~~~~~~~~~~~~~id~~~l~~~l~~~--~ 181 (358)
+ +. +|+.....|.|... + .+.+.+.. . ....++ ..|++.+++.++.. +
T Consensus 159 ~~g~~~~~~~ii~~~~~yHG~t~-~-------~~s~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~ 224 (474)
T PLN02624 159 KKGIPKNEAIIVSCCGCFHGRTL-A-------AISMSCDNEATRGFGPLLPGHLKVD------FGDLDALEKIFEEDGDR 224 (474)
T ss_pred hcCCCCCCcEEEEECCCcCCCCH-H-------HhhcCCCccccccCCCCCCCceEeC------CCCHHHHHHHHHhCCCC
Confidence 1 33 45555433332210 0 01111100 0 001111 24789999988642 3
Q ss_pred CcEEEEcCCCC--CCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC-CC-CC-cccEEEecCCccCCC--CC
Q 018318 182 PKLIICGGSAY--PRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA-NP-FE-YCHIVTTTTHKSLRG--PR 250 (358)
Q Consensus 182 ~~~v~~~~~~~--~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~-~~-~~-~~d~~~~s~~K~l~g--~~ 250 (358)
+++|+++...+ |...| +++|.++|++||+++|+|++|. |+...+... .. .+ ..|++++ +|.+++ .+
T Consensus 225 iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~p 301 (474)
T PLN02624 225 IAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVIL--GKALGGGVIP 301 (474)
T ss_pred EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEe--cccccCCCCc
Confidence 56677775443 34444 9999999999999999999985 543322211 11 12 4677775 598854 35
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (358)
.|+++.+++ +.+.+.......+.+ .+....++..++++.+.+. ...++..++.++|++.|.
T Consensus 302 igav~~~~~---------------i~~~~~~~~~~~T~~-g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~ 362 (474)
T PLN02624 302 VSAVLADKD---------------VMLCIKPGEHGSTFG-GNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQ 362 (474)
T ss_pred ceeeeecHH---------------HHhHhccCCcCCCCC-CCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHH
Confidence 677777663 333332211111122 2333444445556554322 334455666677777666
Q ss_pred hC
Q 018318 331 GK 332 (358)
Q Consensus 331 ~~ 332 (358)
+.
T Consensus 363 ~l 364 (474)
T PLN02624 363 KI 364 (474)
T ss_pred HH
Confidence 54
No 308
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.20 E-value=1.9e-09 Score=103.93 Aligned_cols=247 Identities=14% Similarity=0.032 Sum_probs=129.9
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~---- 119 (358)
+|.|.+|+.+.+.... .. +++. ..+...+ ..++|.+++..... ..++++||++|+..++.....
T Consensus 93 hp~v~~Av~~ql~~l~---~~-~~~~-~~~~~~~----lAe~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t~~ 160 (442)
T TIGR03372 93 NPNVIAAVENQLAKQP---LH-SQEL-LDPLRAL----LAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQSP 160 (442)
T ss_pred CHHHHHHHHHHHHhCC---Cc-cccc-CCHHHHH----HHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHhh
Confidence 7999999988775321 11 1222 1232222 34667777643322 235668999999999875521
Q ss_pred -CCCeEEEecCCCCccccccccccCCcccccccce-eEEeecccCCC---CCCCCHHHHHHHHhh-----cCCcEEEEcC
Q 018318 120 -PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSS---TGYIDYDKLEEKALD-----FRPKLIICGG 189 (358)
Q Consensus 120 -~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~---~~~id~~~l~~~l~~-----~~~~~v~~~~ 189 (358)
...+|++....|.|... + .+...+.. ....+.+..+. -...|.+++++.+++ .+..+|+++.
T Consensus 161 ~gr~~ii~~~~~yHG~t~-~-------~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEp 232 (442)
T TIGR03372 161 RGKFTFIAASGAFHGKSL-G-------ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEP 232 (442)
T ss_pred cCCcEEEEECCCccCCCH-H-------HhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 23578877765544321 0 01111100 00000000000 012467788777753 2345667653
Q ss_pred C--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCCCC--CeeEEEEeC
Q 018318 190 S--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP--RAGMIFYRK 258 (358)
Q Consensus 190 ~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~g~--~gG~i~~~~ 258 (358)
. +.|...| ++++.++|++||+++|+|++|. |+...+... ..++ ..|+++ +.|.|+|. +.|.+++++
T Consensus 233 v~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~~ 309 (442)
T TIGR03372 233 IQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGATIATE 309 (442)
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeee--ehhhhcCCcccceEEEecH
Confidence 2 2344445 8999999999999999999984 542222210 1112 468765 68998642 455566665
Q ss_pred CCCCCCCCCCCCccccHHHHhhhh--cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 259 GPKPPKKGQPEGAVYDFEDKINFA--VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+ +.+.+... .+..+.+ .++...++..++++.+.++ ...++.++..++|++.|++.
T Consensus 310 ~---------------i~~~~~~~~~~~~~T~~-gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l 366 (442)
T TIGR03372 310 A---------------VFSVLFDNPFLHTTTFG-GNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQL 366 (442)
T ss_pred H---------------HHHhhhccCccccCCCC-CCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHH
Confidence 3 43433211 1111121 1334444444556655432 34455666677777777654
No 309
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.18 E-value=2e-09 Score=104.01 Aligned_cols=258 Identities=17% Similarity=0.131 Sum_probs=139.9
Q ss_pred hcceeEeccC--C---CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccC
Q 018318 31 CRGIELIASE--N---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYS 105 (358)
Q Consensus 31 ~~~~~l~a~~--~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~s 105 (358)
++.+.+..+. . .-+|.|.+++.+.+.... .+ +. ..+... ..++++.+++.- .+ ..++++|
T Consensus 50 ~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~~----~~-~~~~~~----~la~~L~~~~~~-~~---~v~~~~s 114 (426)
T PRK00062 50 NEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--SF----GA-PTELEV----ELAELVIELVPS-IE---MVRMVNS 114 (426)
T ss_pred CEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--cC----CC-CCHHHH----HHHHHHHHhCCC-CC---EEEEecC
Confidence 3556666542 2 348999999988876422 11 11 112222 234677776531 11 2356788
Q ss_pred ChHHHHHHHHhhcC--CCCeEEEecCCCCccccccccccCCcc-c----ccccceeEEe---ecccCCCCCCCCHHHHHH
Q 018318 106 GSPANFAAYTAVLE--PHDRIMGLDLPSGGHLTHGYYTSGGKK-I----SATSIYFESL---PYKVNSSTGYIDYDKLEE 175 (358)
Q Consensus 106 Gt~a~~~~l~a~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~-~----~~~g~~~~~~---~~~~~~~~~~id~~~l~~ 175 (358)
|++|+..++..... .+++|+...+.|.+... +.....+.. . ...+...... .+.+ ...|++++++
T Consensus 115 GseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~l~~ 189 (426)
T PRK00062 115 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHAD-SLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA----PYNDLEAVEE 189 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCccCCchh-hhhhccCccccccCCCCCCCCCcccccceEEc----CCCCHHHHHH
Confidence 99999999887633 36788888877665420 000000000 0 0000000000 0111 1358899999
Q ss_pred HHhhc--CCcEEEEcC--CCCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCc
Q 018318 176 KALDF--RPKLIICGG--SAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHK 244 (358)
Q Consensus 176 ~l~~~--~~~~v~~~~--~~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K 244 (358)
.+++. ++.+|+++. ++.|...+ +++|.++|++||+++|+|++|. |+. .+... ..++ ..|+ .+++|
T Consensus 190 ~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r-~g~~~~~~~~~~~pDi--~~~gK 265 (426)
T PRK00062 190 LFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFR-VALGGAQGYYGVTPDL--TTLGK 265 (426)
T ss_pred HHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccc-cCCccHHHHhCCCcch--Hhhhh
Confidence 88642 456677663 23344445 8999999999999999999985 652 22111 0112 3464 46789
Q ss_pred cCC-CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh---cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHH
Q 018318 245 SLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA---VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKA 320 (358)
Q Consensus 245 ~l~-g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~ 320 (358)
.++ |.+.|++++++ ++.+.+... ....+. +.+....++..++++.+..+ +..++.++
T Consensus 266 ~l~~G~p~ga~~~~~---------------~i~~~~~~~~~~~~~~T~-~~~p~~~aaa~a~L~~~~~~---~~~~~~~~ 326 (426)
T PRK00062 266 IIGGGLPVGAFGGRR---------------EIMEQLAPLGPVYQAGTL-SGNPLAMAAGLATLKLLKEP---GFYEELEA 326 (426)
T ss_pred HhhCCCcceeeeEHH---------------HHHHhhccCCCceecccC-cCCHHHHHHHHHHHHHHhcc---hHHHHHHH
Confidence 885 44567777776 344444311 111111 23334445555566665432 45666777
Q ss_pred HHHHHHHHHhh
Q 018318 321 NAVALGNYLTG 331 (358)
Q Consensus 321 ~~~~l~~~L~~ 331 (358)
+.+++++.|++
T Consensus 327 ~~~~~~~~l~~ 337 (426)
T PRK00062 327 LTKRLAEGLKE 337 (426)
T ss_pred HHHHHHHHHHH
Confidence 77777777764
No 310
>PLN00144 acetylornithine transaminase
Probab=99.17 E-value=4.9e-09 Score=99.80 Aligned_cols=261 Identities=17% Similarity=0.084 Sum_probs=138.1
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc---C-
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---E- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~---~- 119 (358)
+|+|.+|+.+.+.... +.+..+. .+...+ ..+++.+..+.+. ..+++||++|+..++.... .
T Consensus 33 ~p~v~~ai~~q~~~~~---~~~~~~~--~~~~~~----la~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~~~ 98 (382)
T PLN00144 33 DPDWVKAVAEQAGTLA---HVSNVYH--TIPQVE----LAKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQRV 98 (382)
T ss_pred CHHHHHHHHHHHHhcC---Ccccccc--CHHHHH----HHHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHHhc
Confidence 7999999988875421 1111111 122222 2366666654332 3667899999999887552 1
Q ss_pred -----C------CCeEEEecCCCCccccccccccCCcccccccce-eEEeecccCCC---CCCCCHHHHHHHHhhcCCcE
Q 018318 120 -----P------HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSS---TGYIDYDKLEEKALDFRPKL 184 (358)
Q Consensus 120 -----~------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~---~~~id~~~l~~~l~~~~~~~ 184 (358)
+ ..+|+.....|.|.... .+...+.. ....+.+..++ -...|++++++.++..++++
T Consensus 99 ~~~~~~~~~~~~r~~ii~~~~~yHG~t~~--------~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aa 170 (382)
T PLN00144 99 RAPDKKDPAASSATEFVSFSNSFHGRTLG--------ALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAA 170 (382)
T ss_pred cCCCCccccccccceEEEECCCcccccHH--------HHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEE
Confidence 0 24688777655443210 01111100 00000000000 01247899999886556788
Q ss_pred EEEcCCCCC--C--ccc--hHHHHHHHHHhCCEEEEechhhhhhhhccccC-C-CCC-cccEEEecCCccCC-CCCeeEE
Q 018318 185 IICGGSAYP--R--DWD--YARFRAVADKCGALLLCDMAHISGLVAAQEAA-N-PFE-YCHIVTTTTHKSLR-GPRAGMI 254 (358)
Q Consensus 185 v~~~~~~~~--~--~~~--l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~-~-~~~-~~d~~~~s~~K~l~-g~~gG~i 254 (358)
|++....++ . ..+ +++|.++|++||+++|+|++|. |+...+... . ..+ ..| +.+++|.++ |.+.|++
T Consensus 171 vi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PD--i~t~sK~l~~G~pig~v 247 (382)
T PLN00144 171 VFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPD--IMTLAKPLAGGLPIGAV 247 (382)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCC--EEEecccccCCcceEEE
Confidence 887644332 1 223 8899999999999999999974 543333211 1 112 456 566789984 5677888
Q ss_pred EEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh---
Q 018318 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG--- 331 (358)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--- 331 (358)
+++++ +.+.+.......+.+ .++...++..++++.+.+. ...+++.+..++|++.|.+
T Consensus 248 ~~~~~---------------~~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~l~~~~~ 308 (382)
T PLN00144 248 LVTEK---------------VASAINPGDHGSTFA-GGPLVCNAALAVLDKISKP---GFLASVAKKGEYLRELLRRKLG 308 (382)
T ss_pred EEcHH---------------HHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHhhc---hHHHHHHHHHHHHHHHHHHHHh
Confidence 88774 444433221222222 2333344444555665432 3344555555555555543
Q ss_pred -CCc-eeeeCCCcceEEEEEc
Q 018318 332 -KGY-SLVTGGTENHLVLWDL 350 (358)
Q Consensus 332 -~G~-~~~~~~~~~~~~~v~~ 350 (358)
.+. .-.. ..+..+|+.+
T Consensus 309 ~~~~~~~vr--g~G~~~~l~l 327 (382)
T PLN00144 309 GNPHVKEVR--GVGLLVGIQL 327 (382)
T ss_pred hCCCceeee--cCceEEEEEe
Confidence 321 1111 2566677765
No 311
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.17 E-value=9.3e-09 Score=94.77 Aligned_cols=224 Identities=16% Similarity=0.212 Sum_probs=130.2
Q ss_pred CCCCccccccCC-hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHH
Q 018318 95 TQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKL 173 (358)
Q Consensus 95 ~~~~~~v~~~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l 173 (358)
.+| .++.++| |.+++.++..++++||.|++..+++.+-+. .++..| +.+++++.| ...+++|.+
T Consensus 123 ~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~---------s~~a~g--v~~ipv~md--~~Gi~pE~l 187 (472)
T KOG0634|consen 123 KNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ---------SMEALG--VKIIPVKMD--QDGIDPESL 187 (472)
T ss_pred CCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH---------hccccC--ceEEecccc--CCCCCHHHH
Confidence 445 3445555 679999999999999999998887765331 234456 456666654 567999999
Q ss_pred HHHHhhc--------CCcEEEE-cCCCCC--Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhc--------------
Q 018318 174 EEKALDF--------RPKLIIC-GGSAYP--RDWD---YARFRAVADKCGALLLCDMAHISGLVAA-------------- 225 (358)
Q Consensus 174 ~~~l~~~--------~~~~v~~-~~~~~~--~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~-------------- 225 (358)
++.+.+- +|+++.+ .+-.|| ...+ -++|.+||++|+.++|.|+-.+. +-+.
T Consensus 188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~-Lq~~~y~~~~~~~~p~~s 266 (472)
T KOG0634|consen 188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYF-LQMNTYNPSLELESPAHS 266 (472)
T ss_pred HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccce-eeccccCCCccccCcccc
Confidence 9988642 2555553 222344 2333 35999999999999999997431 1111
Q ss_pred ------cccCCCC--C--cccEEEecCCccC-CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChh
Q 018318 226 ------QEAANPF--E--YCHIVTTTTHKSL-RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNH 294 (358)
Q Consensus 226 ------~~~~~~~--~--~~d~~~~s~~K~l-~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (358)
...+..+ + |--+-.-|++|-+ +|.|-|++.+++. .+...++..... +++ |+..
T Consensus 267 ~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~--------------~l~ril~~ae~~-t~~-pSg~ 330 (472)
T KOG0634|consen 267 SSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL--------------FLKRILDLAEVA-TSG-PSGF 330 (472)
T ss_pred HHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH--------------HHHHHhhhccee-ecC-cccc
Confidence 0011111 1 2235667999977 5778899999884 222223322111 122 2221
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHH----HHHHHHHHHHHhhC---C-ceeeeCCCcceEEEEEcC
Q 018318 295 QIGALAVALKQASTPAFKAYAKQV----KANAVALGNYLTGK---G-YSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 295 ~~~al~~al~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~---G-~~~~~~~~~~~~~~v~~~ 351 (358)
...-+.+.++...++++.+++.++ ...+..+-..|.+. + +++.. +.++..+||.+.
T Consensus 331 sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~-P~aGmFiwv~i~ 394 (472)
T KOG0634|consen 331 SQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHP-PKAGMFIWVEIP 394 (472)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEec-CCcceEEEEEec
Confidence 111122334444444444444332 23334444455442 4 55554 678889999884
No 312
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.17 E-value=7.8e-09 Score=99.64 Aligned_cols=252 Identities=13% Similarity=0.075 Sum_probs=133.3
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc-CCC-
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL-EPH- 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~-~~g- 121 (358)
+|.|.+|+.+.+.... .+ + . ..+...+ ..+++.++++...+ ...+++||++|+..++.... ..|
T Consensus 71 ~p~v~~ai~~q~~~~~--~~-~---~-~~~~~~~----la~~L~~~~~~~~~---~v~f~~SGsEA~e~AiklAr~~tgr 136 (433)
T PRK00615 71 HPKICDAIQQGAERGT--SY-G---L-TSEQEIL----FAEELFSYLGLEDH---KIRFVSSGTEATMTAVRLARGITGR 136 (433)
T ss_pred CHHHHHHHHHHHHhCC--CC-C---C-CCHHHHH----HHHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHhhCC
Confidence 7999999988775321 11 0 1 1122222 33667777654321 23566899999999987663 233
Q ss_pred CeEEEecCCCCccccccccccCCcccccccce---e-EEe---e-cccCCCCCCCCHHHHHHHHhhc--CCcEEEEcCC-
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY---F-ESL---P-YKVNSSTGYIDYDKLEEKALDF--RPKLIICGGS- 190 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~-~~~---~-~~~~~~~~~id~~~l~~~l~~~--~~~~v~~~~~- 190 (358)
.+|+.....|.|....... .+...+.. . ... + .+....-...|++++++.++++ +..+|+++..
T Consensus 137 ~~ii~~~~~yHG~td~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~ 211 (433)
T PRK00615 137 SIIIKFLGCYHGHADTLLQ-----GISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPIC 211 (433)
T ss_pred CEEEEEcCccCCCCcccCc-----ccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCC
Confidence 4677766555443200000 01111100 0 000 0 0000000134789999998653 3456666632
Q ss_pred -CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc--CCCCC-cccEEEecCCccCC-CCCeeEEEEeCCCC
Q 018318 191 -AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLR-GPRAGMIFYRKGPK 261 (358)
Q Consensus 191 -~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~~~~-~~d~~~~s~~K~l~-g~~gG~i~~~~~~~ 261 (358)
+.|...| +++|.++|++||+++|+|++| .|+ ..+.. ...++ ..|+++ +.|.|+ |.++|+++++++
T Consensus 212 ~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~-R~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~~-- 285 (433)
T PRK00615 212 ANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGF-RVAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHKS-- 285 (433)
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccc-cccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecHH--
Confidence 2333333 569999999999999999998 465 22211 01122 568765 689986 446788888774
Q ss_pred CCCCCCCCCccccHHHHhhhhcCCCCcC--CCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh----hCCce
Q 018318 262 PPKKGQPEGAVYDFEDKINFAVFPSLQG--GPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT----GKGYS 335 (358)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~G~~ 335 (358)
+.+.+.........+ +.++..+++..++++.+.++ ...++++++.++|.+.|+ +.|+.
T Consensus 286 -------------i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~ 349 (433)
T PRK00615 286 -------------IMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFP 349 (433)
T ss_pred -------------HHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 444442211101111 12344455555666665432 346667777777755554 44655
Q ss_pred e
Q 018318 336 L 336 (358)
Q Consensus 336 ~ 336 (358)
+
T Consensus 350 v 350 (433)
T PRK00615 350 V 350 (433)
T ss_pred e
Confidence 3
No 313
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.15 E-value=3.7e-09 Score=103.71 Aligned_cols=262 Identities=15% Similarity=0.066 Sum_probs=135.8
Q ss_pred cceeEecc--CCCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcC-CCCCCCCccccccC
Q 018318 32 RGIELIAS--ENFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-LDPTQWGVNVQPYS 105 (358)
Q Consensus 32 ~~~~l~a~--~~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g-~~~~~~~~~v~~~s 105 (358)
+.+.+.++ ...+ +|+|.+|+.+.+.. ....... +....+...+++ ++|.+++. .+.. ...+++|
T Consensus 90 ~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~-~~~~~~~--~~~~~~~~~~la----e~L~~~~~~~~~~---~v~f~~S 159 (504)
T PLN02760 90 KYLDALAGLWCTALGGSEPRLVAAATEQLNK-LPFYHSF--WNRTTKPSLDLA----KELLEMFTARKMG---KVFFTNS 159 (504)
T ss_pred EEEEcCcCHHhcccCCCCHHHHHHHHHHHhh-ccceecc--cccCcHHHHHHH----HHHHhhcCCCCCC---EEEEeCC
Confidence 45665553 3333 79999999888753 2111110 001123333444 66666643 2221 2355789
Q ss_pred ChHHHHHHHHhhc-------CCC-CeEEEecCCCCccccccccccCCcccccccce------------eEEeecccCCC-
Q 018318 106 GSPANFAAYTAVL-------EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY------------FESLPYKVNSS- 164 (358)
Q Consensus 106 Gt~a~~~~l~a~~-------~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~- 164 (358)
|++|+..++.... +++ .+|+.....|.|... + .+.+.|.. +...+++....
T Consensus 160 GsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~-~-------a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~ 231 (504)
T PLN02760 160 GSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTL-I-------SASLSGLPALHQKFDLPAPFVLHTDCPHYWRF 231 (504)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChH-h-------hhhccCChhhccCCCCCCCCcEEeCCCccccc
Confidence 9999999988763 133 577777755544321 1 11111110 11111110000
Q ss_pred ---CC------CCCHHHHHHHHhh---cCCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechh-hhhhhhc
Q 018318 165 ---TG------YIDYDKLEEKALD---FRPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAH-ISGLVAA 225 (358)
Q Consensus 165 ---~~------~id~~~l~~~l~~---~~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~-~~g~~~~ 225 (358)
.. ....+++++++.+ .++.+|+++.. ..|...| +++|.++|++||+++|+|++| +.|-.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~ 311 (504)
T PLN02760 232 HLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT 311 (504)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch
Confidence 00 0112457777742 23456776642 2344445 999999999999999999998 3443332
Q ss_pred cccCCCCC-cccEEEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-------cCCCCcCCCChhH
Q 018318 226 QEAANPFE-YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQ 295 (358)
Q Consensus 226 ~~~~~~~~-~~d~~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 295 (358)
..-...++ ..|++ ++.|.++|. +.|.++++++ +.+.+... ....+.++ ++..
T Consensus 312 ~~a~e~~gv~PDiv--tlgK~lggG~~PigAv~~~~~---------------i~d~~~~~~~~~~~~~h~~T~~g-nPl~ 373 (504)
T PLN02760 312 MFGCDKYNIKPDLV--SLAKALSSAYMPIGAVLVSPE---------------ISDVIHSQSNKLGSFAHGFTYSG-HPVS 373 (504)
T ss_pred hhHHHhcCCCCcEE--EecccccCCccccceEeecHH---------------HHhhhhcccccccCcccCCCCCC-CHHH
Confidence 10001112 46764 457998652 3455666663 33333210 11222222 3344
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 296 ~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+++..++++.+.+ +...++++++.++|++.|++.
T Consensus 374 ~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~L~~l 407 (504)
T PLN02760 374 CAVALEALKIYKE---RNIPEHVNKIAPRFQDGIKAF 407 (504)
T ss_pred HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHH
Confidence 4444555665543 255777888888888888663
No 314
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.14 E-value=4.4e-09 Score=100.79 Aligned_cols=260 Identities=18% Similarity=0.134 Sum_probs=136.6
Q ss_pred cceeEecc--CCC---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+.+..+ ... -+|+|.+|+.+.+.... +.+..++ .+...++ .++|.++..... ...+++||
T Consensus 41 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~~~~--~~~~~~l----a~~L~~~~~~~~----~v~f~~sG 107 (408)
T PRK04612 41 EYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLW---HTSNVFY--SAPPLKL----AEELVTASRFAE----KVFLCNSG 107 (408)
T ss_pred EEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc---ccccccC--CHHHHHH----HHHHHhhCCCCC----EEEEcCch
Confidence 45565544 222 27999999988775321 1111111 1222222 356666653222 24667899
Q ss_pred hHHHHHHHHhhcC--------C-CCeEEEecCCCCccccccccccCCcccccccce-eE--EeecccC-CCCCCCCHHHH
Q 018318 107 SPANFAAYTAVLE--------P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FE--SLPYKVN-SSTGYIDYDKL 173 (358)
Q Consensus 107 t~a~~~~l~a~~~--------~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~-~~~~~id~~~l 173 (358)
++|+..++..... + ..+|+.....|.|.... .+...+.. .. ..+++-. ..-...|++.+
T Consensus 108 seA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~--------~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 179 (408)
T PRK04612 108 TEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLA--------AVTATAQPKYQEGYEPLPGGFRYVDFNDVEAL 179 (408)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHH--------HHHhcCCcccccCCCCCCCCceEcCCCCHHHH
Confidence 9999999876531 1 23677777655443210 01111100 00 0000000 00012478999
Q ss_pred HHHHhhcCCcEEEEcCCC-CC-C-cc---chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccC
Q 018318 174 EEKALDFRPKLIICGGSA-YP-R-DW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSL 246 (358)
Q Consensus 174 ~~~l~~~~~~~v~~~~~~-~~-~-~~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l 246 (358)
+++++..++.+|++.... .+ . .. -+++|.++|++||+++|+|++|. |+...+....... ++..-+.+++|.+
T Consensus 180 ~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l 258 (408)
T PRK04612 180 EAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKAL 258 (408)
T ss_pred HHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchh
Confidence 998864455666665322 22 2 11 28899999999999999999975 5433332110011 3334455678998
Q ss_pred C-CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 018318 247 R-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVAL 325 (358)
Q Consensus 247 ~-g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l 325 (358)
+ |.+.|+++++++ +.+.+.......+.+ .+....++..++++.+.+ +...++..++.++|
T Consensus 259 ~~G~piga~~~~~~---------------~~~~~~~~~~~~t~~-~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l 319 (408)
T PRK04612 259 GGGFPIGAMLAGPK---------------VAETMQFGAHGTTFG-GNPLAAAVARVALRKLAS---PQIAANVARQSAAL 319 (408)
T ss_pred cCCCceEEEEECHH---------------HHhhhcCCCcCCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHH
Confidence 4 446677777663 433333222222222 233444444555655432 35567777778888
Q ss_pred HHHHhhC
Q 018318 326 GNYLTGK 332 (358)
Q Consensus 326 ~~~L~~~ 332 (358)
++.|++.
T Consensus 320 ~~~l~~l 326 (408)
T PRK04612 320 RAGLEAL 326 (408)
T ss_pred HHHHHHH
Confidence 8888764
No 315
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.11 E-value=2.2e-08 Score=97.48 Aligned_cols=246 Identities=15% Similarity=0.092 Sum_probs=130.4
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|.|.+++.+.+..... + + ...+ .+.+..+++.+.+..- + -..+++||++|+..++.... ...
T Consensus 117 ~p~v~~av~~ql~~~~~--~-~----~~~~----~~~~lAe~l~~~~p~~-~---~v~f~~SGsEA~e~AlklAR~~tgr 181 (474)
T PLN02482 117 DDEVLAALAETMKKGTS--F-G----APCL----LENVLAEMVIDAVPSV-E---MVRFVNSGTEACMGVLRLARAYTGR 181 (474)
T ss_pred CHHHHHHHHHHHhhCCC--C-C----CCCH----HHHHHHHHHHHhCCCC-C---EEEEeCChHHHHHHHHHHHHHhcCC
Confidence 69999999888754221 1 1 0111 2222346677666421 1 23556889999999987652 234
Q ss_pred CeEEEecCCCCccccccccc-cCCc-cc---cccccee----EEeecccCCCCCCCCHHHHHHHHhhc--CCcEEEEcCC
Q 018318 122 DRIMGLDLPSGGHLTHGYYT-SGGK-KI---SATSIYF----ESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICGGS 190 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~-~~~~-~~---~~~g~~~----~~~~~~~~~~~~~id~~~l~~~l~~~--~~~~v~~~~~ 190 (358)
++|+.....|.|+....... ..+. .. ...+... ....+ ...|++++++.++++ +..+|+++..
T Consensus 182 ~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~nd~~~l~~~l~~~~~~iAavI~Epv 255 (474)
T PLN02482 182 EKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTA------PYNDLEAVKKLFEANKGEIAAVILEPV 255 (474)
T ss_pred CEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEe------cCCChHHHHHHHHhCCCceEEEEECCC
Confidence 57877776555532100000 0000 00 0000000 00111 124789999988653 3456666632
Q ss_pred --CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCCC-CCeeEEEEeCCC
Q 018318 191 --AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRG-PRAGMIFYRKGP 260 (358)
Q Consensus 191 --~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~g-~~gG~i~~~~~~ 260 (358)
+.|...| +++|.++|++||+++|+|++| .|+ ..+... ..++ ..|++ ++.|.++| .+.|.+++++
T Consensus 256 ~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGf-R~g~~ga~~~~gv~PDi~--t~gK~lggG~Pigav~g~~-- 329 (474)
T PLN02482 256 VGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGF-RIAYGGAQEYFGITPDLT--TLGKVIGGGLPVGAYGGRR-- 329 (474)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCe-ecCcchHhHHhCCCCCEE--EecchhhCCCceEEEEEcH--
Confidence 2233323 678999999999999999998 565 222110 1122 46775 55899854 3445556666
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCCCCcCC--CChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGG--PHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++.+.+.........++ .++..+++..++|+.+.+ +...+++.++.++|++.|++.
T Consensus 330 -------------ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 330 -------------EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEA 387 (474)
T ss_pred -------------HHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHH
Confidence 34444432100011111 233344444455665543 245677778888888888764
No 316
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.11 E-value=9.5e-09 Score=95.35 Aligned_cols=265 Identities=13% Similarity=0.063 Sum_probs=150.5
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCC------CCccccccCChHHHHHHHHhh-------cCCC-----------CeEE-
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQ------WGVNVQPYSGSPANFAAYTAV-------LEPH-----------DRIM- 125 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~------~~~~v~~~sGt~a~~~~l~a~-------~~~g-----------d~Vl- 125 (358)
..+...+||..+.+||+++++.+... -|.-|+..|.+++...++.+. ++.+ +-|.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 45777899999999999999986421 112355566666666655443 1222 2233
Q ss_pred EecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcCC-----cEEEEcCCCCC--Cccch
Q 018318 126 GLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRP-----KLIICGGSAYP--RDWDY 198 (358)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~-----~~v~~~~~~~~--~~~~l 198 (358)
+.+-.|.+. - +.+...+++.+. ++.|+ ++.++.+.|+++|++... -.|+.+.-.++ ...++
T Consensus 187 ~SDqahssv---e------ka~~i~~VklR~--l~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l 254 (511)
T KOG0628|consen 187 CSDQAHSSV---E------KACLIAGVKLRA--LPTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDEL 254 (511)
T ss_pred ecCcccchH---H------HhHhhcceeEEE--eeccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccH
Confidence 333333221 1 122234444443 44453 889999999999987543 23332222222 34579
Q ss_pred HHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---CcccEEEecCCccCCC-CCeeEEEEeCCCCCCCC-CCCCCccc
Q 018318 199 ARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EYCHIVTTTTHKSLRG-PRAGMIFYRKGPKPPKK-GQPEGAVY 273 (358)
Q Consensus 199 ~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~~~d~~~~s~~K~l~g-~~gG~i~~~~~~~~~~~-~~~~~~~~ 273 (358)
++|..+|+++|+|++||+|.+..+...+.+...+ +.+|.+.+.+|||+.. ..+..++.++...-... .-+.+
T Consensus 255 ~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~--- 331 (511)
T KOG0628|consen 255 EELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPL--- 331 (511)
T ss_pred HHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChH---
Confidence 9999999999999999999553333223222222 2689999999999642 34566777664210000 00000
Q ss_pred cHHH-HhhhhcCCC-CcCCCChhHHHH--HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEE
Q 018318 274 DFED-KINFAVFPS-LQGGPHNHQIGA--LAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLW 348 (358)
Q Consensus 274 ~~~~-~~~~~~~~~-~~~~~~~~~~~a--l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v 348 (358)
.+.. .... ..++ ...-|....+.+ ++..++.+..++++++++++.+.++.+.+.+.+- -|++.. ..++-+|
T Consensus 332 yL~h~~~~~-~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~---~~~lgLv 407 (511)
T KOG0628|consen 332 YLKHAYQGS-APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVN---KRILGLV 407 (511)
T ss_pred hhcchhhcc-CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeec---cccccee
Confidence 0000 0000 0000 001122222333 3566777766778999999999999999988765 577653 4566666
Q ss_pred EcCCCC
Q 018318 349 DLRPLG 354 (358)
Q Consensus 349 ~~~~~~ 354 (358)
..+..|
T Consensus 408 cFRlk~ 413 (511)
T KOG0628|consen 408 CFRLKG 413 (511)
T ss_pred EEeecC
Confidence 665443
No 317
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.11 E-value=3e-08 Score=91.53 Aligned_cols=232 Identities=19% Similarity=0.107 Sum_probs=136.1
Q ss_pred HHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-c--CCCCeEEEecCCCCccccccccccCCcccccccceeEEeec
Q 018318 83 RSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-L--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY 159 (358)
Q Consensus 83 ~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (358)
...++++.|.+-.. + =..-.+|.+-++++.+. . ++..+++++...|+.+...-. -...+.+++++..
T Consensus 126 Qtlv~dLTGm~VAN--A-Sm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~-------Tra~~~g~~i~~~ 195 (450)
T COG0403 126 QTLVADLTGLDVAN--A-SMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLR-------TRAEGLGIEIEVV 195 (450)
T ss_pred HHHHHHHhCCCccc--c-hhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHH-------hhcccCceEEEEe
Confidence 36789999988531 1 11223555444444444 2 236789998877765542210 0123333444444
Q ss_pred ccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC-CC-CccchHHHHHHHHHhCCEEEEech-hhhhhhhccccCCCCC-cc
Q 018318 160 KVNSSTGYIDYDKLEEKALDFRPKLIICGGSA-YP-RDWDYARFRAVADKCGALLLCDMA-HISGLVAAQEAANPFE-YC 235 (358)
Q Consensus 160 ~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~-~~-~~~~l~~i~~la~~~g~~lvvD~a-~~~g~~~~~~~~~~~~-~~ 235 (358)
+. -|.++++++ ++..+..|++..|+ +| ...++++|.+.+|++|+++++=.- =++++. ..|-+ |+
T Consensus 196 ~~------~d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL-----~pPGe~GA 263 (450)
T COG0403 196 DA------DDLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLL-----KPPGEFGA 263 (450)
T ss_pred cc------chhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhcc-----CCccccCC
Confidence 32 277888887 54456777888776 45 556799999999999998776331 033432 23445 99
Q ss_pred cEEEecCCcc-----CCCCCeeEEEEeCCCCCCCC----------CCCCCcc---ccHHHHhhhhcCCCCcCCCChhHHH
Q 018318 236 HIVTTTTHKS-----LRGPRAGMIFYRKGPKPPKK----------GQPEGAV---YDFEDKINFAVFPSLQGGPHNHQIG 297 (358)
Q Consensus 236 d~~~~s~~K~-----l~g~~gG~i~~~~~~~~~~~----------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (358)
||++++++-. |+||..|++.+++++.+-.+ .|+.-+. ......|++..-+ +.-.....+.
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKAT--SNICTnQaLl 341 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKAT--SNICTNQALL 341 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccc--hhhhHHHHHH
Confidence 9999999973 57899999999998754222 2332210 0111223321110 0001112222
Q ss_pred HHHHH-HH-HhccHHHHHHHHHHHHHHHHHHHHHhhC--Cceeee
Q 018318 298 ALAVA-LK-QASTPAFKAYAKQVKANAVALGNYLTGK--GYSLVT 338 (358)
Q Consensus 298 al~~a-l~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~--G~~~~~ 338 (358)
++.++ +. .+...++.++.++..+.+.+++++|++. |+++..
T Consensus 342 A~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~ 386 (450)
T COG0403 342 ALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVF 386 (450)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecc
Confidence 22222 22 2344577899999999999999999965 588764
No 318
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.10 E-value=4.3e-09 Score=90.83 Aligned_cols=230 Identities=17% Similarity=0.133 Sum_probs=141.2
Q ss_pred HHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcCCC-CeEEEecCCCCccccccccccCCcccccccceeEEeecccCC
Q 018318 86 ALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS 163 (358)
Q Consensus 86 la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 163 (358)
+++--+...+ .+...-|+ +.+..++.+.+.|| ++|+.++|+|+-+. . .+...+++ ++.++.+
T Consensus 78 ~~~dkpLt~d----nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~-v--------~A~iNd~e--Vvkvpl~- 141 (375)
T KOG0633|consen 78 LAQDKPLTSD----NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV-V--------DAAINDAE--VVKVPLN- 141 (375)
T ss_pred cccCCCCCcc----ceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE-E--------EeecCCce--EEEecCC-
Confidence 3333455553 35556677 47888889999999 89999999886432 1 11234443 4444444
Q ss_pred CCCCCCHHHHHHHHhhc-CCcEEEEcCCCCCC--ccchHHHHHHHHHh-CCEEEEechhhhhhhhccccCCCC-C-ccc-
Q 018318 164 STGYIDYDKLEEKALDF-RPKLIICGGSAYPR--DWDYARFRAVADKC-GALLLCDMAHISGLVAAQEAANPF-E-YCH- 236 (358)
Q Consensus 164 ~~~~id~~~l~~~l~~~-~~~~v~~~~~~~~~--~~~l~~i~~la~~~-g~~lvvD~a~~~g~~~~~~~~~~~-~-~~d- 236 (358)
.++.++.|++.+.++.. .+|+++++.|.||+ ....+.|.++.+.- +.++++|+| +..+.+.+. ..++ . +..
T Consensus 142 pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEA-YidFsg~~S-~~~lV~kYpNL 219 (375)
T KOG0633|consen 142 PDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEA-YIDFSGVES-RMKLVKKYPNL 219 (375)
T ss_pred CCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeee-eEeeccccc-cchHhHhCCce
Confidence 27899999999999765 57888888888873 44455666666543 689999999 444332110 1111 2 444
Q ss_pred EEEecCCccC--CCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHH
Q 018318 237 IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAY 314 (358)
Q Consensus 237 ~~~~s~~K~l--~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~ 314 (358)
+++.+++|.| +|.+-|+-+++. .+.+.+.....|+..+.+ ...+|++ |+..-..+.++.+
T Consensus 220 ivlqTlSKsfGLAGiRvG~~~~~~---------------~ia~iln~~KaPYNiS~~--~s~~AL~-Als~~n~kkme~~ 281 (375)
T KOG0633|consen 220 IVLQTLSKSFGLAGIRVGYGAFPL---------------SIAEILNRAKAPYNISVA--GSVAALA-ALSDSNGKKMEDV 281 (375)
T ss_pred eehhhhhhhcCcceeEeecccccH---------------HHHHHHHhccCCccccch--hHHHHHH-hcCcccchHHHHH
Confidence 6678999986 466768777766 355555544444432211 1222322 2221112346788
Q ss_pred HHHHHHHHHHHHHHHhhC-CceeeeCCCcceEEEEEcC
Q 018318 315 AKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 315 ~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~v~~~ 351 (358)
++.+.+.+.+|...|.+. ++.-+.++...+.+++.+.
T Consensus 282 rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~ 319 (375)
T KOG0633|consen 282 RDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVT 319 (375)
T ss_pred HHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEc
Confidence 888888899999999987 4443444455556666654
No 319
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.09 E-value=1.9e-08 Score=97.46 Aligned_cols=268 Identities=13% Similarity=0.004 Sum_probs=136.8
Q ss_pred cceeEecc--CCCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+.++ ...+ +|.|.+|+.+.+.... +....+. ..+...+ ..++|.+++....+ ...+++||
T Consensus 42 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~---~~~~~~~-~~~~~~~----la~~L~~~~p~~~~---~v~f~~sG 110 (443)
T PRK08360 42 EYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLI---HYTPIYG-FPVEPLL----LAEKLIEIAPGDNP---KVSFGLSG 110 (443)
T ss_pred EEEEccccHhhcccCCCCHHHHHHHHHHHHhcc---Ccccccc-CcHHHHH----HHHHHHHhCCCCCC---EEEEcCCH
Confidence 45566554 2322 7999999988875421 1111111 1122222 23667777654322 23566889
Q ss_pred hHHHHHHHHhhc--CCCCeEEEecCCCCccc-cccccccCCcccc-ccc--ceeEEeecccCCC-CC--------CCCHH
Q 018318 107 SPANFAAYTAVL--EPHDRIMGLDLPSGGHL-THGYYTSGGKKIS-ATS--IYFESLPYKVNSS-TG--------YIDYD 171 (358)
Q Consensus 107 t~a~~~~l~a~~--~~gd~Vl~~~~~~~~~~-~~~~~~~~~~~~~-~~g--~~~~~~~~~~~~~-~~--------~id~~ 171 (358)
++|+..++.... ....+|+.....|.|.- .....+....... ..+ ..+..++++-... .+ ..+++
T Consensus 111 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (443)
T PRK08360 111 SDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVE 190 (443)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHH
Confidence 999999987652 23446776664443321 1000000000000 000 0111222210000 00 02345
Q ss_pred HHHHHHhh----cCCcEEEEcCCCC--CCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEE
Q 018318 172 KLEEKALD----FRPKLIICGGSAY--PRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIV 238 (358)
Q Consensus 172 ~l~~~l~~----~~~~~v~~~~~~~--~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~ 238 (358)
.+++++++ .++++|+++...+ +...+ +++|.++|++||+++|+|++|. |+...+... ..++ ..|++
T Consensus 191 ~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDii 269 (443)
T PRK08360 191 YIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDII 269 (443)
T ss_pred HHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEE
Confidence 56777753 3467787764322 22222 8899999999999999999975 443333211 1122 45766
Q ss_pred EecCCccCC-CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHH
Q 018318 239 TTTTHKSLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQ 317 (358)
Q Consensus 239 ~~s~~K~l~-g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~ 317 (358)
+++|.++ |.+.|++++++ ++.+.+.......+.+ .+....++..++++.+..+ ...++
T Consensus 270 --tlsK~l~~G~pigav~~~~---------------~i~~~~~~~~~~~T~~-~~p~~~aaa~a~l~~l~~~---~l~~~ 328 (443)
T PRK08360 270 --TLGKPLGGGLPISATIGRA---------------EIMDSLPPLAHAFTLS-GNPVASAAALAVIEEIEEK---NLLKR 328 (443)
T ss_pred --EecccccCCceeEEEEEcH---------------HHHhhhcCCCCCCCCC-cCHHHHHHHHHHHHHHHHc---CHHHH
Confidence 4599985 45678888876 3444443221222222 2333344445556655322 45667
Q ss_pred HHHHHHHHHHHHhhC
Q 018318 318 VKANAVALGNYLTGK 332 (358)
Q Consensus 318 ~~~~~~~l~~~L~~~ 332 (358)
.+++.++|++.|++.
T Consensus 329 ~~~~g~~l~~~L~~l 343 (443)
T PRK08360 329 AEKLGNYTKKRLEEM 343 (443)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777778888777653
No 320
>PRK07046 aminotransferase; Validated
Probab=99.09 E-value=2e-08 Score=97.49 Aligned_cols=244 Identities=13% Similarity=0.090 Sum_probs=131.9
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|.|.+|+.+.+......+. ..+ .+.+..+++.++++.+. ..+++|||+|+..++.... ...
T Consensus 93 ~p~i~~Av~~q~~~~~~~~~-------~~~----~~~~lAe~l~~~~~~~~-----v~F~nSGtEA~e~AlrlAR~~TGr 156 (453)
T PRK07046 93 PAPVARALAEQARRGLTTML-------PSE----DAAWVGEELARRFGLPY-----WQVATTATDANRFVLRWARAVTGR 156 (453)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------CCH----HHHHHHHHHHHHhCCCE-----EEEECCHHHHHHHHHHHHHHhhCC
Confidence 68999999887754221111 112 22223467777776443 3567899999999987652 234
Q ss_pred CeEEEecCCCCccccccccc-cCCccc---cccccee----EEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCC--C
Q 018318 122 DRIMGLDLPSGGHLTHGYYT-SGGKKI---SATSIYF----ESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS--A 191 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~-~~~~~~---~~~g~~~----~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~--~ 191 (358)
++|+.....|.|........ ..+... ...|... ....+ ...|++.+++.+...+..+|+++.. +
T Consensus 157 ~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~nd~~~l~~~l~~~~vAavi~EPi~g~ 230 (453)
T PRK07046 157 PKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVV------EFNDLAALEAALADGDVAAVLAEPAMTN 230 (453)
T ss_pred CEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEee------CCCCHHHHHHHhCCCCeEEEEECCCCCC
Confidence 67887776555542110000 000000 0011000 01111 1248899999986445667777642 2
Q ss_pred CCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCccCC-CCCeeEEEEeCCCCCCCC
Q 018318 192 YPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKK 265 (358)
Q Consensus 192 ~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K~l~-g~~gG~i~~~~~~~~~~~ 265 (358)
.|...+ ++++.++|++||+++|+|+.+..+. +.+.....++ ..|+++ +.|.++ |.+.|+++++++
T Consensus 231 ~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~-g~Gg~~~~~gv~PDi~t--~gK~lggG~Pi~av~g~~~------ 301 (453)
T PRK07046 231 IGMVLPEPGFHEALRELTRRYGTLLVIDETHTISS-GPGGYTRAHGLEPDFLV--VGKPIAGGVPCAVYGFSAE------ 301 (453)
T ss_pred CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCcc-CCcchhHHhCCCcccee--ehhhhcCCCcceeeeehHH------
Confidence 232222 7899999999999999999985221 1111111123 568875 589885 445677777773
Q ss_pred CCCCCccccHHHHhhhh-------c--CCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 266 GQPEGAVYDFEDKINFA-------V--FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 266 ~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
+.+.+... . ..++. +.++..+++..++++.+.++ +..++..+..++|++.|++
T Consensus 302 ---------i~~~~~~~~~~~~~~~~~~~~T~-~gnpl~~aa~~a~L~~l~~~---~~~~~~~~~g~~l~~~L~~ 363 (453)
T PRK07046 302 ---------LAERAQAAKASAPPGHSGIGTTL-SANALAMAAMRATLAEVMTE---AAYAHMLALAARLAAGLRA 363 (453)
T ss_pred ---------HHHHHhhccccCCCCCceeCCCC-cccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHH
Confidence 44443311 0 01111 12333444445556555432 3456666677777777764
No 321
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.09 E-value=1.2e-08 Score=98.51 Aligned_cols=266 Identities=16% Similarity=0.069 Sum_probs=138.4
Q ss_pred cceeEecc--CCCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+..+ ...+ +|+|.+|+.+.+..-. .... ..+. .+...+ ..+++.+++....+ ...+++||
T Consensus 43 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~-~~~~--~~~~~~----la~~l~~~~p~~~~---~v~f~~sG 111 (423)
T PRK05964 43 ELIDAISSWWVATHGHNHPYIDQAIREQLDRLD-HVIF-AGFT--HEPAER----LAQRLVALTPGGLD---HVFFSDSG 111 (423)
T ss_pred EEEEcchhHHhccCCCCCHHHHHHHHHHHhhCC-Cccc-cccC--CHHHHH----HHHHHHHhCCCCCC---EEEEeCCc
Confidence 45666544 2222 7999999988775321 1110 0111 122222 34677777642111 23567899
Q ss_pred hHHHHHHHHhhcC-------C-CCeEEEecCCCCccccccccccCCccc--c-ccc--ceeEEeecccCCCCCCCCHHHH
Q 018318 107 SPANFAAYTAVLE-------P-HDRIMGLDLPSGGHLTHGYYTSGGKKI--S-ATS--IYFESLPYKVNSSTGYIDYDKL 173 (358)
Q Consensus 107 t~a~~~~l~a~~~-------~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~--~-~~g--~~~~~~~~~~~~~~~~id~~~l 173 (358)
++|+..++..... + ..+|+.....|.|...... ...+... . ..+ ..+..++++.+ +....+++++
T Consensus 112 seA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l 189 (423)
T PRK05964 112 SVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTM-SVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDAL 189 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHH-hcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHH
Confidence 9999999876521 2 3478887766555321100 0000000 0 000 01122222210 0011237888
Q ss_pred HHHHhhc--CCcEEEEcC-CC--CCCc----cchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEec
Q 018318 174 EEKALDF--RPKLIICGG-SA--YPRD----WDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTT 241 (358)
Q Consensus 174 ~~~l~~~--~~~~v~~~~-~~--~~~~----~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s 241 (358)
++.++++ +..+|++.. .. .|.. ..+++|.++|++||+++|+|++|. |+...+... ...+ ..|+++
T Consensus 190 ~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~~a~~~~~v~pDi~~-- 266 (423)
T PRK05964 190 EALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT-GFGRTGTLFACEQAGVSPDIMC-- 266 (423)
T ss_pred HHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhHHHhcCCCCCeee--
Confidence 8888642 345666653 11 2322 238899999999999999999984 543322110 1112 467764
Q ss_pred CCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh------cCCCCcCCCChhHHHHHHHHHHHhccHHHHH
Q 018318 242 THKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------VFPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (358)
Q Consensus 242 ~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~al~~al~~~~~~~~~~ 313 (358)
+.|+|+|. +.|+++++++ +.+.+... ....+. +.+...+++..++++.+.. +.
T Consensus 267 ~~K~l~gG~~p~~av~~~~~---------------i~~~~~~~~~~~~~~~~~T~-~~np~~~aaa~a~l~~l~~---~~ 327 (423)
T PRK05964 267 LSKGLTGGYLPLAATLCTAE---------------IFEAFYSDDRAKAFMHSPSY-TANPLACAAANASLDLFED---EP 327 (423)
T ss_pred eehhhhcCcccceEEEEcHH---------------HHHhhhcCCcccccccCCCC-CcCHHHHHHHHHHHHHHHh---cC
Confidence 46998543 5677777663 44443211 011111 1233445555556665532 24
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 018318 314 YAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 314 ~~~~~~~~~~~l~~~L~~~ 332 (358)
+.++..++.+++++.|++.
T Consensus 328 ~~~~~~~~g~~l~~~l~~l 346 (423)
T PRK05964 328 VLERVAALSAGLAEGLEPF 346 (423)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 5677888888998888765
No 322
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.09 E-value=1.6e-08 Score=98.14 Aligned_cols=246 Identities=13% Similarity=0.051 Sum_probs=131.3
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--C--
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--E-- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~-- 119 (358)
+|+|.+|+.+.+.... ... +++ ..+...++ .++|.+++....+ ...+++||++|+..++.... .
T Consensus 100 ~p~v~~Ai~~ql~~l~---~~~-~~~-~~~~~~~l----ae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~t~~ 167 (459)
T PRK11522 100 NPVVVSAVQNQLAKQP---LHS-QEL-LDPLRAML----AKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQSP 167 (459)
T ss_pred CHHHHHHHHHHHhhCc---ccc-ccc-CCHHHHHH----HHHHHHhCCCCCC---EEEEeCCchHHHHHHHHHHHHHhcc
Confidence 7999999988775321 111 111 12323233 3667776543222 23556799999999987652 1
Q ss_pred CC-CeEEEecCCCCccccccccccCCcccccccce-eE--Eeec--ccCCCCCCCCHHHHHHHHhh-----cCCcEEEEc
Q 018318 120 PH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FE--SLPY--KVNSSTGYIDYDKLEEKALD-----FRPKLIICG 188 (358)
Q Consensus 120 ~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~--~~~~--~~~~~~~~id~~~l~~~l~~-----~~~~~v~~~ 188 (358)
+| .+|+.....|.|.-. + .+...+.. .. ..+. .+. .-...|.+++++++++ .++.+|+++
T Consensus 168 ~gr~~ii~~~~~yHG~t~-~-------~ls~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~iAavIvE 238 (459)
T PRK11522 168 RGKFTFIATSGAFHGKSL-G-------ALSATAKSTFRKPFMPLLPGFR-HVPFGNIEAMRTALSECKKTGDDVAAVILE 238 (459)
T ss_pred CCCcEEEEecCCCCCCcH-H-------HhhhcCCcccccCCCCCCCCCc-ccCCCCHHHHHHHHHHhhccCCcEEEEEEe
Confidence 23 367777655544321 0 01111100 00 0000 000 0012478888888863 134566665
Q ss_pred CC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCCCC--CeeEEEEe
Q 018318 189 GS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP--RAGMIFYR 257 (358)
Q Consensus 189 ~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~g~--~gG~i~~~ 257 (358)
.. +.|...| ++++.++|++||+++|+|++|. |+...+... ..++ ..|++ ++.|.|+|. +.|.++++
T Consensus 239 pv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDiv--t~gK~lggG~~Pigav~~~ 315 (459)
T PRK11522 239 PIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDIL--CLAKALGGGVMPIGATIAT 315 (459)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEE--EechhhhCCCccceeEEEc
Confidence 32 2344444 8999999999999999999984 542222210 1122 46876 568998652 34555555
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhh--cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFA--VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++ +.+.+... .+..+.+ .++...++..++++.+.++ ...++..++.++|++.|++.
T Consensus 316 ~~---------------i~~~~~~~~~~~~~T~~-gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l 373 (459)
T PRK11522 316 EE---------------VFSVLFDNPFLHTTTFG-GNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQL 373 (459)
T ss_pred HH---------------HHHHhccCCcccCCCCC-CCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHH
Confidence 52 33332211 1111111 1334444445566665432 45677888888898888765
No 323
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.07 E-value=3.4e-08 Score=101.58 Aligned_cols=226 Identities=12% Similarity=0.050 Sum_probs=130.7
Q ss_pred HHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh---cCCCCeEEEecCCCCccccccccccCCcccccccceeEEee
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLP 158 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 158 (358)
.+..++++.|.+..+ +.+ ...+|.+.++++.+. .+++++|+++...|+....... + .+...|. +++.
T Consensus 114 ~Qt~i~eLtGm~~aN--aSl-~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~-t----~a~~~g~--~v~~ 183 (939)
T TIGR00461 114 FQTVVSDLTGLPVAN--ASL-LDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLH-T----RAKPFGI--EVIV 183 (939)
T ss_pred HHHHHHHHHCCChhh--hhc-cchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHH-H----HHHhcCc--EEEE
Confidence 457899999998632 112 233454444444443 2345899998877754321100 0 1122343 3332
Q ss_pred cccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC-CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-ccc
Q 018318 159 YKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA-YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH 236 (358)
Q Consensus 159 ~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~-~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d 236 (358)
+|++++++.+ ++..|++..|+ +|...|+++|++++|++|+++++++-..+... +..|-+ |+|
T Consensus 184 ---------~~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~l----l~~Pge~GaD 247 (939)
T TIGR00461 184 ---------VDCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTL----LTPPGHYGAD 247 (939)
T ss_pred ---------EcHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCC----cCCHHHcCCc
Confidence 2445666554 34566666665 56667999999999999999999775433211 122334 899
Q ss_pred EEEecCCcc-----CCCCCeeEEEEeCCCCCCCC----------CCCCCccccHHH---HhhhhcCCCCcCCCCh---hH
Q 018318 237 IVTTTTHKS-----LRGPRAGMIFYRKGPKPPKK----------GQPEGAVYDFED---KINFAVFPSLQGGPHN---HQ 295 (358)
Q Consensus 237 ~~~~s~~K~-----l~g~~gG~i~~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~ 295 (358)
|++++.+++ ++||..|++.+++++.+..+ .|+.-+...+.. .++.. .++.++ ..
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRe-----kAtSNICt~qa 322 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRD-----KATSNICTAQV 322 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeeccccccccccc-----ccCcchhHHHH
Confidence 998888886 35788899999987643211 121111001111 11110 112121 11
Q ss_pred HHHHHHH-H-HHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 296 IGALAVA-L-KQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 296 ~~al~~a-l-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
..++.++ + ..+..+++.++.++...++.++++.|.+.|+++..
T Consensus 323 L~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~ 367 (939)
T TIGR00461 323 LLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELIN 367 (939)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 2222222 2 33344567888888999999999999999998865
No 324
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.07 E-value=3e-08 Score=94.24 Aligned_cols=265 Identities=17% Similarity=0.076 Sum_probs=137.3
Q ss_pred cceeEeccCCC-----CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC-CCCCCccccccC
Q 018318 32 RGIELIASENF-----TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYS 105 (358)
Q Consensus 32 ~~~~l~a~~~~-----~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~v~~~s 105 (358)
++|.+.++-+. -+|.|.+|+.+.+..-... ..++... +...++ .++|.+++-.+ .. ..++.+|
T Consensus 57 ~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~---~~~~~~~-e~~v~~----ae~L~~~~p~~~~~---~~~f~~s 125 (447)
T COG0160 57 EYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHT---HTRDLYY-EPYVEL----AEKLTALAPGSGLK---KVFFGNS 125 (447)
T ss_pred EEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcc---cCCcccc-hhHHHH----HHHHHHhCCcccCC---eEEecCC
Confidence 35666653332 2799999998876543211 1122211 222222 25666666542 22 2466789
Q ss_pred ChHHHHHHHHhh--cCCCCeEEEecCCCCccccccccccCCccc-cc-----ccceeEEeecccCCCC---------CCC
Q 018318 106 GSPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKI-SA-----TSIYFESLPYKVNSST---------GYI 168 (358)
Q Consensus 106 Gt~a~~~~l~a~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~-----~g~~~~~~~~~~~~~~---------~~i 168 (358)
|++|+..++... ...+..|+.....|.|.- .+.....++.. .. ....+..++++..... ..-
T Consensus 126 GaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T-~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~ 204 (447)
T COG0160 126 GAEAVEAAIKIARAYTGRPGVIAFDGAFHGRT-LGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDD 204 (447)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCcccccc-hhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHH
Confidence 999999998766 223457887776654431 11000000000 00 0111233444321111 011
Q ss_pred CHHHHHHHHhhc-----CCcEEEEcC--CCCCCcc-c---hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC----
Q 018318 169 DYDKLEEKALDF-----RPKLIICGG--SAYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE---- 233 (358)
Q Consensus 169 d~~~l~~~l~~~-----~~~~v~~~~--~~~~~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~---- 233 (358)
..+.+++.+.+. ++.++++.. .+.|... | ++++.++|++||+++|+|+.|. |+...|.. +.++
T Consensus 205 ~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt-G~GRTG~~-fa~E~~gv 282 (447)
T COG0160 205 ALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT-GFGRTGKM-FAFEHFGV 282 (447)
T ss_pred HHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccccc-hhhhhcCC
Confidence 234456655432 255677763 2344332 2 7899999999999999999995 55444422 2232
Q ss_pred cccEEEecCCccCC-CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHH
Q 018318 234 YCHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (358)
Q Consensus 234 ~~d~~~~s~~K~l~-g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~ 312 (358)
..|++++ .|.++ |.+.|.++++.+ +.+.... ...++.+ .++...++..+.|+.+.+ +
T Consensus 283 ~PDivt~--aK~ig~G~Pl~avv~r~e---------------i~~~~~g-~~~~Tf~-GNpva~Aaa~AvL~vie~---e 340 (447)
T COG0160 283 EPDIVTL--AKSLGGGLPLSAVVGRAE---------------IMDWPPG-GHGGTFG-GNPVACAAALAVLDVIEE---E 340 (447)
T ss_pred CCCEEEe--cccccCCCceeEEeccHH---------------hcccCCc-ccCCCCC-cCHHHHHHHHHHHHHHHH---c
Confidence 4587765 58885 456677777774 2221111 1222222 233444443445554433 2
Q ss_pred HHHHHHHHHHHHHHHHHhhC
Q 018318 313 AYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 313 ~~~~~~~~~~~~l~~~L~~~ 332 (358)
...++..+.-+++++.|.++
T Consensus 341 ~L~~~a~~~G~~l~~~L~~l 360 (447)
T COG0160 341 NLLERAAELGEYLRDRLEEL 360 (447)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 45666677777888877654
No 325
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.06 E-value=1.8e-08 Score=94.92 Aligned_cols=200 Identities=20% Similarity=0.173 Sum_probs=117.1
Q ss_pred cceeEeccC--C---CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASE--N---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~--~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+.+..+- . .-+|+|.+|+.+.+.... ..+..+. .+...+++ ++++++++.+. .++++||
T Consensus 25 ~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~---~~~~~~~--~~~~~~la----~~l~~~~~~~~-----v~~~~SG 90 (364)
T PRK04013 25 RYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLV---VAGPMFE--HEEKEEML----EELSKWVNYEY-----VYMGNSG 90 (364)
T ss_pred EEEEcccChhhccCCCCCHHHHHHHHHHHHhcC---CccCCcC--CHHHHHHH----HHHHhhcCCCE-----EEEeCch
Confidence 456666542 2 237999999988875422 1111221 23344454 67788876553 3667899
Q ss_pred hHHHHHHHHhh-cCCC-CeEEEecCCCCccccccccccCCcccccccc-----eeEEeecccCCCCCCCCHHHHHHHHhh
Q 018318 107 SPANFAAYTAV-LEPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSI-----YFESLPYKVNSSTGYIDYDKLEEKALD 179 (358)
Q Consensus 107 t~a~~~~l~a~-~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~id~~~l~~~l~~ 179 (358)
++|++.++... ..+| ++|++....|.+..... +...+. .+.....++.. ....|++++++.+.+
T Consensus 91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~--------ls~~~~~~~~~~~~p~~~~~~~-~~~~d~~~l~~~i~~ 161 (364)
T PRK04013 91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGA--------LSATWKPKYREDFEPLVPGFKH-IPFNDVEAAKEAITK 161 (364)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCccccCchhh--------ccCCCCcccccCCCCCCCCcEE-ecCCCHHHHHHHhcC
Confidence 99999998876 3345 78998887665532111 111110 00110011110 012478899998864
Q ss_pred cCCcEEEEcCCC--CC-Cccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCCC-C
Q 018318 180 FRPKLIICGGSA--YP-RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRG-P 249 (358)
Q Consensus 180 ~~~~~v~~~~~~--~~-~~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~g-~ 249 (358)
++++|++.... .| ...| +++|.++|++||+++|.|++|. |+ ..+... ..++ ..|++++ .|.|+| .
T Consensus 162 -~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~--gK~lggG~ 236 (364)
T PRK04013 162 -ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTM--GKGIGNGV 236 (364)
T ss_pred -CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEe--cccccCCc
Confidence 67888876432 12 2345 8999999999999999999986 55 433221 1122 5687766 788853 3
Q ss_pred CeeEEEEeCC
Q 018318 250 RAGMIFYRKG 259 (358)
Q Consensus 250 ~gG~i~~~~~ 259 (358)
+.|.++.+.+
T Consensus 237 P~~a~~~~~~ 246 (364)
T PRK04013 237 PVSLTLTNFD 246 (364)
T ss_pred eeEEEEeccc
Confidence 4466666553
No 326
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=2e-09 Score=97.83 Aligned_cols=272 Identities=15% Similarity=0.131 Sum_probs=162.3
Q ss_pred eEeccCCCC----CHHHHHHHhcccccCCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHH
Q 018318 35 ELIASENFT----SFAVIEALGSALTNKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA 109 (358)
Q Consensus 35 ~l~a~~~~~----~~~V~~a~~~~~~~~~~~g~~~~~-~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a 109 (358)
.-.++.|++ .+++.+.....+ ..||-|..|.+ +|+.......+| +++++++|++.+ ++.+.|-.+
T Consensus 97 ~N~aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a-----ivYs~gF~t 166 (467)
T KOG1358|consen 97 LNFASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA-----IVYSYGFST 166 (467)
T ss_pred ecccchhhhhhcccHHHHHHHHHHH-HHhCCCCcCCCcccccceeecccH----HHHHHhhCCcce-----eeeccccch
Confidence 334677765 678887776555 46777777644 555445556788 789999999983 667888888
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhc------CC-
Q 018318 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF------RP- 182 (358)
Q Consensus 110 ~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~------~~- 182 (358)
+..++.++.+.||.|++..- .+++.- +.+++.. -....+ .+.|.+++++.+.+. ++
T Consensus 167 i~S~ipafsKrGDIi~~de~---~nfaIq------~GlqlSR--S~i~~F------khndm~~lerll~E~~~~~~K~~k 229 (467)
T KOG1358|consen 167 IESAIPAFSKRGDIIFVDEA---VNFAIQ------KGLQLSR--STISYF------KHNDMEDLERLLPEQEDEDQKNPK 229 (467)
T ss_pred hhhcchhhhccCcEEEEehh---hhHHHH------HHHhhhh--heeEEe------cCCCHHHHHHhccCcchhhhhccc
Confidence 88899999999999988763 222100 1111111 122233 256777777666431 12
Q ss_pred ----c-EEEEc--CCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccc--cC----CCCCcccEEEecCCccCCCC
Q 018318 183 ----K-LIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQE--AA----NPFEYCHIVTTTTHKSLRGP 249 (358)
Q Consensus 183 ----~-~v~~~--~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~--~~----~~~~~~d~~~~s~~K~l~g~ 249 (358)
+ .+++. ..++|..+|+.+|.++..+|...+++|++-+.|..+... .. .+.+.+|++++|+.-+++ .
T Consensus 230 ~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala-s 308 (467)
T KOG1358|consen 230 KALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA-S 308 (467)
T ss_pred cccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccc-c
Confidence 2 23333 245678899999999999999999999998888766411 11 222368999999987764 4
Q ss_pred CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHH-HHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 018318 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGA-LAVALKQASTPAFKAYAKQVKANAVALGNY 328 (358)
Q Consensus 250 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-l~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (358)
.|||.+++.-.. ..+++... .+..+...++.+++ ...++..... -..+.+.+++....+-+.
T Consensus 309 ~GgFc~G~~~i~-------------~hQrLSg~--~Y~fSAslPp~la~aa~~ai~i~~~--~p~~~~~L~~k~~~~H~~ 371 (467)
T KOG1358|consen 309 GGGFCAGKSFIA-------------DHQRLSGS--GYCFSASLPPYLAGAAIKAILIEEW--NPEIVQPLRAKVAKFHAA 371 (467)
T ss_pred cCceeecceeeE-------------eeeecccc--ceeeeccCchhhhhhHHHHHHHHhh--Ccchhhhhhccccccchh
Confidence 567766644210 01112111 11111111122221 1223332211 134666677777777788
Q ss_pred HhhC-CceeeeCCCcceEEEEEcCC
Q 018318 329 LTGK-GYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 329 L~~~-G~~~~~~~~~~~~~~v~~~~ 352 (358)
|+.. |+.+.. ...++++-+...+
T Consensus 372 l~~~s~~~v~~-~~~SPi~hl~l~~ 395 (467)
T KOG1358|consen 372 LSSNSGFIVSG-SPESPIIHLQLER 395 (467)
T ss_pred hhcCCceEEec-CcCCceeeeeecc
Confidence 8776 677765 3455565555543
No 327
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.03 E-value=5.7e-08 Score=94.11 Aligned_cols=268 Identities=18% Similarity=0.086 Sum_probs=135.7
Q ss_pred cceeEeccC--C---CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASE--N---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~--~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+..+- . .-+|.|.+|+.+.+..- ..... +....+...+ ..+++.+++....+ ...+++||
T Consensus 47 ~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l-~~~~~---~~~~~~~~~~----la~~l~~~~p~~~~---~v~f~~sG 115 (442)
T PRK13360 47 RVLDGTAGLWCVNAGHGRPEIVEAVRAQAGEL-DYAPA---FQMGHPKAFE----LANRIAEIAPGGLN---HVFFTNSG 115 (442)
T ss_pred EEEECchhHHHhccCCCCHHHHHHHHHHHHhC-CCccc---CCcCCHHHHH----HHHHHHHhCCCCCC---EEEEeCCc
Confidence 455655432 2 23799999998877531 11111 1011232222 34667777632211 23567899
Q ss_pred hHHHHHHHHhhcC-------C-CCeEEEecCCCCccccccccccCCcccccc--c---ceeEEeecccC-CCC-CC----
Q 018318 107 SPANFAAYTAVLE-------P-HDRIMGLDLPSGGHLTHGYYTSGGKKISAT--S---IYFESLPYKVN-SST-GY---- 167 (358)
Q Consensus 107 t~a~~~~l~a~~~-------~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~--g---~~~~~~~~~~~-~~~-~~---- 167 (358)
++|+..++..... + ..+|+.....|.|... +.....+...... + ..+..++.+.+ ... ..
T Consensus 116 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~-gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 194 (442)
T PRK13360 116 SESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGF-GGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQP 194 (442)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccH-hhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChH
Confidence 9999999875421 2 3578887766554311 0000000000000 0 01111222100 000 00
Q ss_pred ----CCHHHHHHHHhhc---CCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhh-hhhhhccccCCCCC
Q 018318 168 ----IDYDKLEEKALDF---RPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHI-SGLVAAQEAANPFE 233 (358)
Q Consensus 168 ----id~~~l~~~l~~~---~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~-~g~~~~~~~~~~~~ 233 (358)
-.+++++++++.. ++.+|+++.. ..|...+ +++|.++|++||+++|+|++|. .|-.+.......++
T Consensus 195 ~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~g 274 (442)
T PRK13360 195 EHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFG 274 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcC
Confidence 0246788888632 3456666632 2344455 8999999999999999999983 33322110001122
Q ss_pred -cccEEEecCCccCCC--CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-------cCCCCcCCCChhHHHHHHHHH
Q 018318 234 -YCHIVTTTTHKSLRG--PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQIGALAVAL 303 (358)
Q Consensus 234 -~~d~~~~s~~K~l~g--~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~al~~al 303 (358)
..|++ ++.|.|+| .+.|.++++++ +.+.+... ....+.+ .++..+++..+++
T Consensus 275 v~PDiv--t~gK~l~gG~~P~gav~~~~~---------------i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L 336 (442)
T PRK13360 275 VTPDLL--TCAKGLTNGAIPMGAVFVSSE---------------IHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATL 336 (442)
T ss_pred CCCcee--eeeeccccCccceEEEEEcHH---------------HHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHH
Confidence 46776 56899864 23455666653 33322210 0111222 2444455555666
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 304 KQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+.+.++ ...++..++.+++++.|++.
T Consensus 337 ~~l~~~---~l~~~~~~~g~~l~~~l~~l 362 (442)
T PRK13360 337 DLYERE---GLLTRAARLAPYWEDALHSL 362 (442)
T ss_pred HHHHhC---CHHHHHHHHHHHHHHHHHHh
Confidence 665432 45677778888888888764
No 328
>PRK06541 hypothetical protein; Provisional
Probab=99.03 E-value=2.5e-08 Score=96.99 Aligned_cols=266 Identities=15% Similarity=0.056 Sum_probs=133.8
Q ss_pred cceeEecc--CCCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+..+ ...+ +|.|.+|+.+.+.... . .....+ ..+...++ .+++.+++....+ ...+++||
T Consensus 53 ~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~-~-~~~~~~--~~~~~~~l----a~~l~~~~p~~~~---~v~f~~sG 121 (460)
T PRK06541 53 RYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLA-F-FPLWSY--AHPPAIEL----AERLAALAPGDLN---RVFFTTGG 121 (460)
T ss_pred EEEECCccHHhccCCCCCHHHHHHHHHHHhhCc-C-cccccc--CCHHHHHH----HHHHHHhCCCCcC---EEEEcCCc
Confidence 45555543 2222 7999999988875321 0 011111 12222223 3667776643222 23567899
Q ss_pred hHHHHHHHHhhcC--------CCCeEEEecCCCCccccccccccCCccc-------ccccceeEEeecccCCC--CCCCC
Q 018318 107 SPANFAAYTAVLE--------PHDRIMGLDLPSGGHLTHGYYTSGGKKI-------SATSIYFESLPYKVNSS--TGYID 169 (358)
Q Consensus 107 t~a~~~~l~a~~~--------~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~~~--~~~id 169 (358)
++|+..++..... ...+|+.....|.|...... ...+... ...| +..++.+.... .+..|
T Consensus 122 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~ 198 (460)
T PRK06541 122 SEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGAL-AITGLPAFKAPFEPLVPG--GFRVPNTNFYRAPELGDD 198 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhh-cCcCChhhccccCCCCCC--cEEeCCCccccccccCCC
Confidence 9999998875421 13578877765544321100 0000000 0011 11111110000 00112
Q ss_pred --------HHHHHHHHhhc---CCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechh-hhhhhhccccCCC
Q 018318 170 --------YDKLEEKALDF---RPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAH-ISGLVAAQEAANP 231 (358)
Q Consensus 170 --------~~~l~~~l~~~---~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~-~~g~~~~~~~~~~ 231 (358)
++.+++.+++. +..+|+++.. ..|...+ +++|.++|++||+++|+|++| +.|-.+.......
T Consensus 199 ~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~ 278 (460)
T PRK06541 199 PEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCER 278 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhh
Confidence 36788887632 2445666532 2334445 899999999999999999998 3442221100011
Q ss_pred CC-cccEEEecCCccCCC-C-CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh--cC--CCCcCCCChhHHHHHHHHHH
Q 018318 232 FE-YCHIVTTTTHKSLRG-P-RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA--VF--PSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 232 ~~-~~d~~~~s~~K~l~g-~-~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~al~~al~ 304 (358)
++ ..|+++ +.|.+++ . +.|.++++++ +.+.+... .+ ..+. +.++..+++..++++
T Consensus 279 ~gv~PDivt--~gK~l~~G~~pigav~~~~~---------------i~~~~~~~~~~~~~~~T~-~gnp~~~aaala~l~ 340 (460)
T PRK06541 279 FGYVPDIIT--CAKGITSGYSPLGAMIASDR---------------LFEPFLDGPTMFLHGYTF-GGHPVSAAVALANLD 340 (460)
T ss_pred cCCCCCEEE--ecccccCCccceeEEEEcHH---------------HHHHhhcCCCccccCCCC-CCCHHHHHHHHHHHH
Confidence 22 468764 7899864 2 4566666653 33333211 11 1111 123333444344455
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
.+.. +...+++.++.++|++.|++.
T Consensus 341 ~l~~---~~~~~~~~~~g~~l~~~L~~l 365 (460)
T PRK06541 341 IFER---EGLLDHVRDNEPAFRATLEKL 365 (460)
T ss_pred HHHh---ccHHHHHHHHHHHHHHHHHHh
Confidence 4432 245677888889999888775
No 329
>PRK06105 aminotransferase; Provisional
Probab=99.03 E-value=4.9e-08 Score=95.02 Aligned_cols=262 Identities=15% Similarity=0.048 Sum_probs=135.9
Q ss_pred cceeEecc--CCC---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+..+ ... -+|+|.+|+.+.+.. .......+.+. .+...++ .++|.+++..+.+ ...+++||
T Consensus 49 ~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~-~~~~~~~~~~~--~~~~~~l----ae~L~~~~p~~~~---~v~f~~SG 118 (460)
T PRK06105 49 RYIEGMAGLWSVALGFSEQRLVEAAARQMKK-LPFYHTFSHKS--HGPVIDL----AEKLVAMAPVPMS---KVFFTNSG 118 (460)
T ss_pred EEEEcchhHHhccCCCCCHHHHHHHHHHHHh-CCCeecccccC--CHHHHHH----HHHHHHhCCCCCC---EEEEeCCc
Confidence 45666644 222 389999999988753 21111111111 1222233 3677777653322 23556889
Q ss_pred hHHHHHHHHhhc------C-C-CCeEEEecCCCCccccccccccCCcccccccc------------eeEEeecccCCC--
Q 018318 107 SPANFAAYTAVL------E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSS-- 164 (358)
Q Consensus 107 t~a~~~~l~a~~------~-~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~-- 164 (358)
++|+.+++.... . + ..+|+.....|.|..... +.+.+. .+..++.+....
T Consensus 119 seAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a--------~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 190 (460)
T PRK06105 119 SEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIAS--------ASLTGLPNNHRSFDLPLDRILHTGCPHYYRFG 190 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhh--------eeccCCcccccccCCCCCCCEEcCCCcccccc
Confidence 999999988642 1 2 346777765554432111 111110 011111110000
Q ss_pred -CC-------CCCHHHHHHHHhhc---CCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhh-hhhhhcc
Q 018318 165 -TG-------YIDYDKLEEKALDF---RPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHI-SGLVAAQ 226 (358)
Q Consensus 165 -~~-------~id~~~l~~~l~~~---~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~-~g~~~~~ 226 (358)
.+ ...++++++++.+. ++.+|+++.. +.|...+ +++|.++|++||+++|+|++|. .|..+..
T Consensus 191 ~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~ 270 (460)
T PRK06105 191 LPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNM 270 (460)
T ss_pred cCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchh
Confidence 00 01246678877432 3567777642 2344444 8899999999999999999983 4433211
Q ss_pred ccCCCCC-cccEEEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhc-------CCCCcCCCChhHH
Q 018318 227 EAANPFE-YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-------FPSLQGGPHNHQI 296 (358)
Q Consensus 227 ~~~~~~~-~~d~~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 296 (358)
--...++ ..|++ ++.|.|+|. +.|+++++++ +.+.+.... +..+.+ .++...
T Consensus 271 f~~~~~~v~PDi~--~~gK~lggG~~P~~av~~~~~---------------i~~~~~~~~~~~~~~~h~~T~~-gnpl~~ 332 (460)
T PRK06105 271 FGCETFGIKPDIL--VMSKQLSSSYQPLSAVLMNEK---------------VYDPIADESGKIGTFGHGFTAS-GHPVAA 332 (460)
T ss_pred hhHHhcCCCCCee--eeecccccCcccceEEEEcHH---------------HHHHHhcccccCcccccCCCCC-CCHHHH
Confidence 0001112 46776 457988653 5677777763 444332210 111111 222333
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 297 ~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++..++++.+.+ +...+++.++.++|++.|++.
T Consensus 333 aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l 365 (460)
T PRK06105 333 AVALENLAIIEE---RDLVGNAAERGARLQARLRAL 365 (460)
T ss_pred HHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHh
Confidence 333445655543 245677788888888888764
No 330
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.02 E-value=6.8e-08 Score=93.38 Aligned_cols=273 Identities=16% Similarity=0.003 Sum_probs=135.0
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh--cCCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~--~~~g 121 (358)
+|.+.+++.+.+.... +...... ..+...+ ..+++.+..+.+... ..++.+||++|+..++... ...+
T Consensus 59 ~~~i~~a~~~~~~~~~---~~~~~~~-~~~~~~~----la~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~r 128 (425)
T PRK08088 59 HPKVVAAVEAQLKKLS---HTCFQVL-AYEPYLE----LCEKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATKR 128 (425)
T ss_pred CHHHHHHHHHHHhhCC---Ccccccc-CCHHHHH----HHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhCC
Confidence 8999999888775321 1111111 1121112 336677766643211 2466789999888887655 2234
Q ss_pred CeEEEecCCCCccccccccccCCccc-cccc-----ceeEEeecccCCCCCCC--CHHHHHHHHhh----cCCcEEEEcC
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKI-SATS-----IYFESLPYKVNSSTGYI--DYDKLEEKALD----FRPKLIICGG 189 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~-~~~g-----~~~~~~~~~~~~~~~~i--d~~~l~~~l~~----~~~~~v~~~~ 189 (358)
.+|+...+.|.|......... +... ...+ ..+...+++.+..+... +++++++++++ .+..+|++..
T Consensus 129 ~~iv~~~~~yHG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Ep 207 (425)
T PRK08088 129 SGVIAFTGAYHGRTHYTLALT-GKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP 207 (425)
T ss_pred CeEEEECCccCCccHHHHHhh-CCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECc
Confidence 467666766554321100000 0000 0000 00111122221111111 15668888852 2456677653
Q ss_pred C-CC-CCcc----chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--cccEEEecCCccCC-CCCeeEEEEeCCC
Q 018318 190 S-AY-PRDW----DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLR-GPRAGMIFYRKGP 260 (358)
Q Consensus 190 ~-~~-~~~~----~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~~d~~~~s~~K~l~-g~~gG~i~~~~~~ 260 (358)
. .+ +... -+++|.++|++||+++|+|++|. |+...+.. ..++ +.+.-+.|++|.++ |.+.|+++++++
T Consensus 208 i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~-~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~- 284 (425)
T PRK08088 208 VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTL-FAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAE- 284 (425)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcch-hHHhhcCCCCCEEEEeccccCCCcceeeEecHH-
Confidence 2 12 2222 38899999999999999999976 44332211 1111 22223578899984 556799999773
Q ss_pred CCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC----Cc-e
Q 018318 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK----GY-S 335 (358)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----G~-~ 335 (358)
+.+.+.......+.+ .+....++....++... .+...+++++..+++++.|.+. +. .
T Consensus 285 --------------~~~~~~~~~~~~t~~-~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 346 (425)
T PRK08088 285 --------------VMDAIAPGGLGGTYA-GNPIACAAALAVLKVFE---QENLLQKANALGEKLKDGLLAIAEKHPEIG 346 (425)
T ss_pred --------------HHhhcCCCCCCCCCC-cCHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 444443322222222 23333344344444432 2344555555566666655442 32 1
Q ss_pred eeeCCCcceEEEEEc
Q 018318 336 LVTGGTENHLVLWDL 350 (358)
Q Consensus 336 ~~~~~~~~~~~~v~~ 350 (358)
-.. ..+..+|+.+
T Consensus 347 ~v~--g~G~~~~l~l 359 (425)
T PRK08088 347 DVR--GLGAMIAIEL 359 (425)
T ss_pred EEe--ccceEEEEEE
Confidence 121 2366688877
No 331
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.02 E-value=6.2e-08 Score=93.67 Aligned_cols=253 Identities=16% Similarity=0.083 Sum_probs=132.6
Q ss_pred hcceeEeccC--CCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccC
Q 018318 31 CRGIELIASE--NFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYS 105 (358)
Q Consensus 31 ~~~~~l~a~~--~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~s 105 (358)
++++.+.++- ..+ +|.|.+|+.+.+.... .+ . .+...++| ..+++.+++.... ...+++|
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~--~~------~-~~~~~~~~--la~~l~~~~p~~~----~v~f~~s 112 (431)
T PRK06209 48 NEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC--NF------T-RPSAIELD--AAESFLELIDGAD----MVKFCKN 112 (431)
T ss_pred CEEEEccccccchhcCCCCHHHHHHHHHHHHhCc--CC------C-CCCHHHHH--HHHHHHHhCCccc----eEEEecC
Confidence 3456666542 222 7999999988875422 11 1 11111222 3466777764222 2356788
Q ss_pred ChHHHHHHHHhhc-CCCC-eEEEec--CCCCcccc-ccccccCCcccccccce--eEEeecccCCCCCCCCHHHHHHHHh
Q 018318 106 GSPANFAAYTAVL-EPHD-RIMGLD--LPSGGHLT-HGYYTSGGKKISATSIY--FESLPYKVNSSTGYIDYDKLEEKAL 178 (358)
Q Consensus 106 Gt~a~~~~l~a~~-~~gd-~Vl~~~--~~~~~~~~-~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~id~~~l~~~l~ 178 (358)
|++|+..++.... -.|. +|+... ..|+.+-. ++ ......+.. .......+ ...|+++++++++
T Consensus 113 GseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g------~~~~~~~~~~~~~~~~~~~----~~~d~~~l~~~l~ 182 (431)
T PRK06209 113 GSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIG------TTPMSAGIPASVSALTVTF----RYNDIASLEALFE 182 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccc------cCCCCCCCChhHhcccccc----CCCCHHHHHHHHH
Confidence 9999999987652 2343 455441 11110000 00 000001100 00001111 1458999999986
Q ss_pred hc--CCcEEEEcCCCCC---CccchHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCCCC-cccEEEecCCccCCC-CC
Q 018318 179 DF--RPKLIICGGSAYP---RDWDYARFRAVADKCGALLLCDMAHISGLVAAQE-AANPFE-YCHIVTTTTHKSLRG-PR 250 (358)
Q Consensus 179 ~~--~~~~v~~~~~~~~---~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~~~-~~d~~~~s~~K~l~g-~~ 250 (358)
++ +..+|+++ +..+ ....+++|.++|++||+++|+|++| .|+...+. ....++ ..|+ .++.|.++| .+
T Consensus 183 ~~~~~~aavi~E-pv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi--~t~gK~lggG~p 258 (431)
T PRK06209 183 DHPGRIACVILE-PATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDL--SCFGKALGNGFA 258 (431)
T ss_pred hCCCCEEEEEEc-cccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcce--eeehhhhcCCcc
Confidence 43 34566665 3333 2335899999999999999999998 56532110 000112 4576 456899864 45
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHH--hh----hhc--CCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDK--IN----FAV--FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANA 322 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~--~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 322 (358)
+|+++++++ +.+. +. ... +..+ -++++..+++..++++.+.++ ...+++.++.
T Consensus 259 ~~av~~~~~---------------i~~~~~~~~~~~~~~~~~~~T-~~~np~~~aaa~a~l~~i~~~---~~~~~~~~~g 319 (431)
T PRK06209 259 VSALAGKRE---------------YMELGGLEHTDRERVFLLSTT-HGAETHALAAAIATMAIYRDE---DVIERLHEQG 319 (431)
T ss_pred cEEEEEHHH---------------HHhhhcccccCCCCceeeccC-CCCCHHHHHHHHHHHHHHhcc---CHHHHHHHHH
Confidence 677777764 3332 10 001 1111 123344555556667766543 3456666667
Q ss_pred HHHHHHHhh
Q 018318 323 VALGNYLTG 331 (358)
Q Consensus 323 ~~l~~~L~~ 331 (358)
++|++.|++
T Consensus 320 ~~l~~~L~~ 328 (431)
T PRK06209 320 AKLAAGVNE 328 (431)
T ss_pred HHHHHHHHH
Confidence 777776654
No 332
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.02 E-value=5.2e-08 Score=93.98 Aligned_cols=286 Identities=12% Similarity=0.043 Sum_probs=143.6
Q ss_pred cceeEeccC--C---CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASE--N---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~--~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+.+.++- . .-+|.|.+|+.+.+.... +...... ..+...++ .++|.+++.....+ ..++++||
T Consensus 41 ~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~---~~~~~~~-~~~~~~~l----a~~l~~~~p~~~~~--~~~f~~sG 110 (421)
T PRK09792 41 EYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFT---HTAYQIV-PYESYVTL----AEKINALAPVSGQA--KTAFFTTG 110 (421)
T ss_pred EEEEccCchhhhcCCCCCHHHHHHHHHHHHhcc---CcccCcc-CCHHHHHH----HHHHHHhCCCCCCc--eEEEeCCh
Confidence 455555432 2 227999999888775321 1111111 11222222 35677765422101 23667899
Q ss_pred hHHHHHHHHhhc--CCCCeEEEecCCCCccccccccccCCc-cccccc-----ceeEEeecccCCCCC---CCCHHHHHH
Q 018318 107 SPANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGK-KISATS-----IYFESLPYKVNSSTG---YIDYDKLEE 175 (358)
Q Consensus 107 t~a~~~~l~a~~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~~~~~g-----~~~~~~~~~~~~~~~---~id~~~l~~ 175 (358)
++|+..++.... ....+|+.....|.|...... ...+. .....+ ..+..++++.+. .+ .-+++.+++
T Consensus 111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~ 188 (421)
T PRK09792 111 AEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTM-ALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIER 188 (421)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHH-hhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHH
Confidence 999999987663 223478877765554321000 00000 000000 012223333211 11 124578888
Q ss_pred HHhh----cCCcEEEEcCCCC--CC-ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecC
Q 018318 176 KALD----FRPKLIICGGSAY--PR-DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTT 242 (358)
Q Consensus 176 ~l~~----~~~~~v~~~~~~~--~~-~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~ 242 (358)
.+++ .++++|++..... +. ..| +++|.++|++||+++|+|++|. |+...+... ..+. ..|+ .++
T Consensus 189 ~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pDi--~t~ 265 (421)
T PRK09792 189 LFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS-GFARTGKLFAMDHYADKPDL--MTM 265 (421)
T ss_pred HHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCchhHHHhcCCCCcE--EEe
Confidence 8863 3456777764432 22 234 8899999999999999999965 443333211 0112 4575 566
Q ss_pred CccCC-CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 018318 243 HKSLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKAN 321 (358)
Q Consensus 243 ~K~l~-g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~ 321 (358)
+|.|+ |.+.|+++++++ +.+.+.......+.+ .++...++..++++.+.+. ...+++++.
T Consensus 266 gK~l~~G~pigav~~~~~---------------i~~~~~~~~~~~T~~-gnpl~~aaa~a~l~~l~~~---~~~~~~~~~ 326 (421)
T PRK09792 266 AKSLAGGMPLSGVVGNAN---------------IMDAPAPGGLGGTYA-GNPLAVAAAHAVLNIIDKE---SLCERANQL 326 (421)
T ss_pred ehhhcCCCceEEEEEcHH---------------HHhccCCCCcCCCCC-CCHHHHHHHHHHHHHHHhh---hHHHHHHHH
Confidence 89984 456788888763 433333211111222 2223333333445544322 445566666
Q ss_pred HHHHHHHHhhC--CceeeeC-CCcceEEEEEcC
Q 018318 322 AVALGNYLTGK--GYSLVTG-GTENHLVLWDLR 351 (358)
Q Consensus 322 ~~~l~~~L~~~--G~~~~~~-~~~~~~~~v~~~ 351 (358)
.+++++.|+.. .+..... ...+-.+|+.+.
T Consensus 327 g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~ 359 (421)
T PRK09792 327 GQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFN 359 (421)
T ss_pred HHHHHHHHHHHHHhCCCcceecccceEEEEEec
Confidence 77777766553 1221111 133556777663
No 333
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.02 E-value=5.3e-08 Score=94.08 Aligned_cols=255 Identities=13% Similarity=0.079 Sum_probs=135.2
Q ss_pred cceeEeccCC--CC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASEN--FT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~~--~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+..+-. .+ +|.|.+|+.+.+......+ + ..+...+ ..+++.+++.. .+ -..+++||
T Consensus 54 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-----~--~~~~~~~----la~~l~~~~p~-~~---~v~f~~sG 118 (428)
T PRK12389 54 KYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYG-----T--PTELEIE----FAKMLKEAIPS-LE---KVRFVNSG 118 (428)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCCccC-----C--CCHHHHH----HHHHHHHhCCC-Cc---EEEEeCCH
Confidence 4566654422 22 7999999988775321111 1 1122222 33666666541 11 23567889
Q ss_pred hHHHHHHHHhhc--CCCCeEEEecCCCCccccccccccCCc-ccc-----cccce----eEEeecccCCCCCCCCHHHHH
Q 018318 107 SPANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGK-KIS-----ATSIY----FESLPYKVNSSTGYIDYDKLE 174 (358)
Q Consensus 107 t~a~~~~l~a~~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~~~-----~~g~~----~~~~~~~~~~~~~~id~~~l~ 174 (358)
++|+..++.... ....+|+.....|.|...... ...+. ... ..+.. .....+ ...|++.++
T Consensus 119 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~~~l~ 191 (428)
T PRK12389 119 TEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVL-VAAGSGPSTLGTPDSAGVPKSIAQEVITV------PFNDIEALK 191 (428)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHH-HhcCCcccccCCCCCCCCCCcccCceEEc------CCCCHHHHH
Confidence 999999987652 234577777765544321000 00000 000 00000 001111 134789999
Q ss_pred HHHhhc--CCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc--CCCCC-cccEEEecCC
Q 018318 175 EKALDF--RPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTH 243 (358)
Q Consensus 175 ~~l~~~--~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~~~~-~~d~~~~s~~ 243 (358)
+.++++ ++.+|+++.. ..|...| +++|.++|++||+++|+|++|. |+ ..+.. ...++ ..|++ ++.
T Consensus 192 ~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~-Rt~~~~a~~~~gv~PDiv--t~g 267 (428)
T PRK12389 192 EALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT-AF-RFMYGGAQDLLGVEPDLT--ALG 267 (428)
T ss_pred HHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc-cc-ccCcchhhHHhCCCCCee--eec
Confidence 988643 3456666632 2344445 8999999999999999999985 43 21110 01122 56875 568
Q ss_pred ccCCC-CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhh-h--cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHH
Q 018318 244 KSLRG-PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF-A--VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVK 319 (358)
Q Consensus 244 K~l~g-~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~ 319 (358)
|.++| .+.|.+++++ ++.+.+.. . ....+. +.++...++..++++.+.++ ...++..
T Consensus 268 K~lggG~Pi~av~~~~---------------~i~~~~~~~~~~~~~~T~-~gnpl~~Aaala~L~~l~~~---~l~~~~~ 328 (428)
T PRK12389 268 KIIGGGLPIGAYGGRK---------------DIMEQVAPLGPAYQAGTM-AGNPASMAAGIACLEVLQQE---GVYEKLD 328 (428)
T ss_pred hhhcCCCceeEEeEHH---------------HHHhhhccCCCcccccCC-ccCHHHHHHHHHHHHHHhcc---cHHHHHH
Confidence 98854 3445556666 34444421 1 011111 12333444445556665432 4567778
Q ss_pred HHHHHHHHHHhh
Q 018318 320 ANAVALGNYLTG 331 (358)
Q Consensus 320 ~~~~~l~~~L~~ 331 (358)
++.++|++.|++
T Consensus 329 ~~g~~l~~~L~~ 340 (428)
T PRK12389 329 RLGAMLEEGILE 340 (428)
T ss_pred HHHHHHHHHHHH
Confidence 888888888875
No 334
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.00 E-value=5e-08 Score=94.72 Aligned_cols=256 Identities=11% Similarity=-0.014 Sum_probs=127.8
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh--cCCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~--~~~g 121 (358)
+|+|.+|+.+.+.... -+... ....+...+ ..+++.+++.....+ ..++++||++|+..++... ....
T Consensus 74 ~p~v~~ai~~q~~~~~--~~~~~--~~~~~~~~~----la~~l~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tgr 143 (443)
T PRK06058 74 APRVVEAVREQVARFT--HTCFM--VTPYEGYVA----VAEQLNRLTPGDHEK--RSALFNSGAEAVENAVKIARSYTGR 143 (443)
T ss_pred CHHHHHHHHHHHHhcc--Ccccc--ccCCHHHHH----HHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHhhCC
Confidence 7999999988875321 01110 011122222 336677776432111 2356789999999998744 2234
Q ss_pred CeEEEecCCCCccccccccccCCccc-cccc-----ceeEEeecccCCCC---CCCC--------HHHHHHHHhhcCCcE
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKI-SATS-----IYFESLPYKVNSST---GYID--------YDKLEEKALDFRPKL 184 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~-~~~g-----~~~~~~~~~~~~~~---~~id--------~~~l~~~l~~~~~~~ 184 (358)
++|+.....|.|...... ...+... ...+ ..+...+++....+ ...+ ++.+++.+...++.+
T Consensus 144 ~~ii~~~~~yHG~t~~al-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAa 222 (443)
T PRK06058 144 QAVVVFDHAYHGRTNLTM-ALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAA 222 (443)
T ss_pred CeEEEECCCcCcChHHHH-hhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEE
Confidence 688887766655421000 0000000 0000 00111111111000 0011 222333332235667
Q ss_pred EEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCC-CCCeeEE
Q 018318 185 IICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GPRAGMI 254 (358)
Q Consensus 185 v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~-g~~gG~i 254 (358)
|++... +.+...+ +++|.++|++||+++|+|++|. |+...+... ..++ ..|++++ .|.++ |.+.|++
T Consensus 223 vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~--gK~l~~G~Pi~av 299 (443)
T PRK06058 223 VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITT--AKGIAGGLPLSAV 299 (443)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEE--cccccCCCccEEE
Confidence 776632 1222222 8999999999999999999975 543322111 1122 4688776 59884 4456777
Q ss_pred EEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+++++ +.+.+.......+. +.+...+++..++++.+.++ ...++..+..++|++.|++.
T Consensus 300 ~~~~~---------------i~~~~~~~~~~~T~-~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l 358 (443)
T PRK06058 300 TGRAE---------------IMDAPHPGGLGGTY-GGNPVACAAALAAIETIEED---DLVARARQIEALMTDRLRAL 358 (443)
T ss_pred EEcHH---------------HHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHH
Confidence 77763 43333322111222 22344455545556554332 44566666777888777663
No 335
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.00 E-value=2.4e-08 Score=94.41 Aligned_cols=223 Identities=17% Similarity=0.165 Sum_probs=115.6
Q ss_pred HHHHHHHhcCCCCCCCCcccccc-CChHHHHHHHHhh---cCCCCeEEEecCCCCccccccccccCCcccccccceeEEe
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPY-SGSPANFAAYTAV---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~-sGt~a~~~~l~a~---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 157 (358)
....++++.|.+. +....- .++.+-++++.+. -+.+++|+++...|+.+.... .-...+.+++++
T Consensus 115 ~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~-------~t~a~~~g~~iv 183 (429)
T PF02347_consen 115 YQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVL-------RTYAAPLGIEIV 183 (429)
T ss_dssp HHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHH-------HHHCCHCCEEEE
T ss_pred HHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHH-------HHhhhhCCeEEE
Confidence 4488999999985 222222 3343333333332 334569999988776554210 001223344555
Q ss_pred ecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC-CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cc
Q 018318 158 PYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA-YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YC 235 (358)
Q Consensus 158 ~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~-~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~ 235 (358)
.++.+ +++..| +.++..|++..|+ +|...++++|++++|++|+++++ .+.-..+. .+..|-+ |+
T Consensus 184 ~~~~~-~~~~~d---------~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~---~l~~Pge~GA 249 (429)
T PF02347_consen 184 EVPLD-EDGTTD---------DDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADPNALG---GLKSPGEYGA 249 (429)
T ss_dssp EE-BB-TTCSB----------STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCC---TC--GGGGT-
T ss_pred Eeccc-ccCCcc---------ccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHh---CcCChhhcCc
Confidence 55554 245555 3367788888777 56667899999999999999988 65332221 1223344 89
Q ss_pred cEEEecCCccC------CCCCeeEEEEeCCCCCCC----------CCCCCCccccH---HHHhhhhc-CCCCcCCCChhH
Q 018318 236 HIVTTTTHKSL------RGPRAGMIFYRKGPKPPK----------KGQPEGAVYDF---EDKINFAV-FPSLQGGPHNHQ 295 (358)
Q Consensus 236 d~~~~s~~K~l------~g~~gG~i~~~~~~~~~~----------~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~ 295 (358)
|++++. ||.| +||..|++.+++.+.+.. ..|+.-+...+ ...+++.. ...+-+ +-..
T Consensus 250 DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIct--nqaL 326 (429)
T PF02347_consen 250 DIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICT--NQAL 326 (429)
T ss_dssp SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---S--S-HH
T ss_pred cEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhh--hHHH
Confidence 999766 7765 456669999998764321 12332221111 11232211 111111 1122
Q ss_pred HHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 296 IGALAVALK-QASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 296 ~~al~~al~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++-.+..+. .+..+++.+..++...++.|+++.|.+.
T Consensus 327 ~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 327 LALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222222222 3344678999999999999999999996
No 336
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.00 E-value=6.4e-08 Score=93.87 Aligned_cols=256 Identities=14% Similarity=0.039 Sum_probs=129.0
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|.|.+|+.+.+.... +....++ ..+...++ .++|++++.....+ ...+++||++|+..++.... ...
T Consensus 60 ~p~v~~Ai~~ql~~~~---~~~~~~~-~~~~~~~l----ae~L~~~~p~~~~~--~v~f~~SGseA~e~AiklAr~~tgr 129 (445)
T PRK08593 60 PPRVVEAIKAQADKFI---HYTPAYM-YHEPLVRL----AKKLCELAPGDFEK--RVTFGLSGSDANDGIIKFARAYTGR 129 (445)
T ss_pred CHHHHHHHHHHHHhcc---Ccccccc-CCHHHHHH----HHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhCC
Confidence 7999999988775321 1111111 12333333 36777776433111 23556899999999987652 223
Q ss_pred CeEEEecCCCCccccccc-cccC-C---cccccccceeEEeecccCCC--CCCCC-------HHHHHHHHhh----cCCc
Q 018318 122 DRIMGLDLPSGGHLTHGY-YTSG-G---KKISATSIYFESLPYKVNSS--TGYID-------YDKLEEKALD----FRPK 183 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~-~~~~-~---~~~~~~g~~~~~~~~~~~~~--~~~id-------~~~l~~~l~~----~~~~ 183 (358)
.+|+.....|.|...... .+.. . ........++..++++-... ....+ ++++++++++ .++.
T Consensus 130 ~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iA 209 (445)
T PRK08593 130 PYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVA 209 (445)
T ss_pred CeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceE
Confidence 467777655544321000 0000 0 00000000111122210000 00111 2445555532 2456
Q ss_pred EEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCC-CCCeeE
Q 018318 184 LIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GPRAGM 253 (358)
Q Consensus 184 ~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~-g~~gG~ 253 (358)
+|+++.. +.+...+ +++|.++|++||+++|+|++|. |+...+... ..++ ..|++ ++.|.++ |.+.|+
T Consensus 210 avI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~--t~gK~l~~G~p~ga 286 (445)
T PRK08593 210 CIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLM--SFGKSLAGGMPMSA 286 (445)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEe--eecccccCCcccEE
Confidence 7777643 2233333 8999999999999999999973 332222110 1112 45766 5689885 456788
Q ss_pred EEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
++++++ +.+.+......++. +.++...++..++++.+.+ +...++..++.++|++.|++
T Consensus 287 v~~~~~---------------i~~~~~~~~~~~T~-~~~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~ 345 (445)
T PRK08593 287 IVGRKE---------------IMESLEAPAHLFTT-GANPVSCAAALATIDMIED---ESLLQRSAEKGEYARKRFDQ 345 (445)
T ss_pred EEEcHH---------------HHhhhccCCCCCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence 888773 44444321111222 2233444444556665543 24566777777888887765
No 337
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.99 E-value=9.3e-08 Score=92.21 Aligned_cols=249 Identities=12% Similarity=0.018 Sum_probs=133.4
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|.|.+|+.+.+.... +....... .+...+ ..+++.+++.....+ ..++++||++|+..++.... ...
T Consensus 58 ~p~v~~ai~~ql~~~~---~~~~~~~~-~~~~~~----la~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~tgr 127 (421)
T PRK06777 58 HPKVVAAVRQQLDQFT---HTAYQIVP-YASYVT----LAERINALAPIDGPA--KTAFFTTGAEAVENAVKIARAYTGR 127 (421)
T ss_pred CHHHHHHHHHHHhhcc---cccccccC-ChHHHH----HHHHHHHhCCCCCCc--eEEEeCCcHHHHHHHHHHHHHhhCC
Confidence 7999999988775421 11111111 122222 236677766422111 23567899999999987652 233
Q ss_pred CeEEEecCCCCccccccccccCCcccccccc-------------eeEEeecccCCC--CCCCCHHHHHHHHhh----cCC
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSI-------------YFESLPYKVNSS--TGYIDYDKLEEKALD----FRP 182 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~~id~~~l~~~l~~----~~~ 182 (358)
.+|+.....|.|..... +.+.+. .+..++++-... ....+++.+++.+++ .+.
T Consensus 128 ~~ii~~~~~yHG~t~~~--------~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~i 199 (421)
T PRK06777 128 PGVIAFGGAFHGRTLLT--------MALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQV 199 (421)
T ss_pred CeEEEEcCCcCCccHHH--------HhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCce
Confidence 46777776555432110 111110 011111110000 001246678887753 234
Q ss_pred cEEEEcCCC--CCC-ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCC-CCCee
Q 018318 183 KLIICGGSA--YPR-DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GPRAG 252 (358)
Q Consensus 183 ~~v~~~~~~--~~~-~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~-g~~gG 252 (358)
.+|++.... .+. ..| +++|.++|++||+++|+|++|. |+...+... ..++ ..|++ +++|.++ |.+.|
T Consensus 200 aavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~pig 276 (421)
T PRK06777 200 AAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMPIS 276 (421)
T ss_pred EEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCceE
Confidence 567765322 222 233 8899999999999999999975 654333211 1112 46765 5799884 55678
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+++++++ +.+.+.......+.+ .+....++..++++.+.. +...++..+..++|++.|++.
T Consensus 277 av~~~~~---------------i~~~~~~~~~~~T~~-~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l 337 (421)
T PRK06777 277 AVVGRAE---------------VMDAPAPGGLGGTYA-GNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKA 337 (421)
T ss_pred EEEEcHH---------------HHhccCCCCCCCCCC-cCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 8888763 444333222222222 233444554556655432 356677778888888888764
No 338
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.99 E-value=5e-08 Score=94.04 Aligned_cols=267 Identities=15% Similarity=0.039 Sum_probs=137.4
Q ss_pred cceeEecc--CCC---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+.++ ... -+|+|.+|+.+.+..-. +.....+ ..+...+ ..++|++++....+ ...+++||
T Consensus 44 ~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~---~~~~~~~-~~~~~~~----la~~L~~~~p~~~~---~v~f~~SG 112 (428)
T PRK07986 44 RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS---HVMFGGI-THPPAIE----LCRKLVAMTPQPLE---CVFLADSG 112 (428)
T ss_pred EEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcC---Ccccccc-CCHHHHH----HHHHHHhhCCCCcC---EEEEeCCc
Confidence 45555543 222 27999999988775321 1110001 1122222 33677777653222 23566789
Q ss_pred hHHHHHHHHhhc-------CCCCeEEEecCCCCccccccccccCCcc--cc--ccc--ceeEEeecccCC--CC-CCCCH
Q 018318 107 SPANFAAYTAVL-------EPHDRIMGLDLPSGGHLTHGYYTSGGKK--IS--ATS--IYFESLPYKVNS--ST-GYIDY 170 (358)
Q Consensus 107 t~a~~~~l~a~~-------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~--~~--~~g--~~~~~~~~~~~~--~~-~~id~ 170 (358)
++|+..++.... ....+|+.....|.|.. .+.....+.. .. ..+ ..+..++.+... +. ...|+
T Consensus 113 sEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t-~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~ 191 (428)
T PRK07986 113 SVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDT-FGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDI 191 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCc-HhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHH
Confidence 999999987653 22457888876655431 1100000000 00 000 001111111000 00 12467
Q ss_pred HHHHHHHhhc--CCcEEEEcCC--CC-CC----ccchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEE
Q 018318 171 DKLEEKALDF--RPKLIICGGS--AY-PR----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIV 238 (358)
Q Consensus 171 ~~l~~~l~~~--~~~~v~~~~~--~~-~~----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~ 238 (358)
+++++.++.. +..+|+++.. .. +. ..-+++|.++|++||+++|+|++| .|+...+... ..++ ..|++
T Consensus 192 ~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~ 270 (428)
T PRK07986 192 APFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDIL 270 (428)
T ss_pred HHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEE
Confidence 7888888642 3456666542 22 22 123899999999999999999998 6653222211 1122 46877
Q ss_pred EecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhc-----CCCCcCCCChhHHHHHHHHHHHhccHHH
Q 018318 239 TTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-----FPSLQGGPHNHQIGALAVALKQASTPAF 311 (358)
Q Consensus 239 ~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~al~~al~~~~~~~~ 311 (358)
+ +.|.|+|. +.|.+++++ ++.+.+.... ...+.+ .++...++..++++.+.++
T Consensus 271 t--~gK~l~gG~~p~~av~~~~---------------~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~L~~i~~~-- 330 (428)
T PRK07986 271 C--LGKALTGGTMTLSATLTTR---------------EVAETISNGEAGCFMHGPTFM-GNPLACAVANASLSLLESG-- 330 (428)
T ss_pred E--echhhhCCcccCcchhchH---------------HHHHHhhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhC--
Confidence 4 78988532 445556665 3444443211 111122 2333444444556655432
Q ss_pred HHHHHHHHHHHHHHHHHHhhC
Q 018318 312 KAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 312 ~~~~~~~~~~~~~l~~~L~~~ 332 (358)
...++..++.++|++.|++.
T Consensus 331 -~~~~~~~~~g~~l~~~l~~l 350 (428)
T PRK07986 331 -DWQQQVAAIEAQLREELAPL 350 (428)
T ss_pred -CHHHHHHHHHHHHHHHHHHH
Confidence 45677888888888888764
No 339
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.97 E-value=1.2e-07 Score=91.47 Aligned_cols=273 Identities=15% Similarity=0.064 Sum_probs=137.2
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|+|.+|+.+.+..-. +.....+ ..+...+ ..+++.+++.-...+ ..++++||++|+..++.... ...
T Consensus 58 ~p~v~~ai~~ql~~l~---~~~~~~~-~~~~~~~----la~~l~~~~p~~~~~--~v~f~~SGseA~e~AlklAr~~tgr 127 (425)
T PRK07495 58 HPRVIAAVKAQLDRFT---HTCHQVV-PYENYVR----LAERLNALVPGDFAK--KTIFVTTGAEAVENAVKIARAATGR 127 (425)
T ss_pred CHHHHHHHHHHHhhcc---CcccCcc-CCHHHHH----HHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhCC
Confidence 7999999988775321 1110001 1122222 336677776432111 23667899999999987652 234
Q ss_pred CeEEEecCCCCccccccccccCCc--ccc-ccc---ceeEEeecccCCCCCCCC----HHHHHHHHhh----cCCcEEEE
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGK--KIS-ATS---IYFESLPYKVNSSTGYID----YDKLEEKALD----FRPKLIIC 187 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~--~~~-~~g---~~~~~~~~~~~~~~~~id----~~~l~~~l~~----~~~~~v~~ 187 (358)
.+|+.....|.|...... ...+. ..+ ..+ .++..++++.+. . ..+ ++++++.+++ .++.+|++
T Consensus 128 ~~ii~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~~~~~l~~~~~~~~~~~~iaavi~ 204 (425)
T PRK07495 128 SAVIAFGGGFHGRTFMGM-SLTGKVVPYKVGFGAMMPDVYHVPFPVEL-H-GVSVEQSLAALDKLFKADVDPQRVAAIII 204 (425)
T ss_pred CeEEEECCCcCCccHHHh-hhcCCCcccccCCCCCCCCeEEecCCccc-c-cccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 578877765544321000 00000 000 000 112223332111 1 122 4556777642 24567776
Q ss_pred cCC--CCCCc----cchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCC-CCCeeEEEEe
Q 018318 188 GGS--AYPRD----WDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GPRAGMIFYR 257 (358)
Q Consensus 188 ~~~--~~~~~----~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~-g~~gG~i~~~ 257 (358)
... +.+.. .-+++|.++|++||+++|+|++|. |+...+... ...+ ..|+ .+++|.++ |.+.|+++++
T Consensus 205 EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi--~tlsK~l~~G~pigav~~~ 281 (425)
T PRK07495 205 EPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADL--TTMAKGLAGGFPLAAVTGR 281 (425)
T ss_pred CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCE--EeehhhhcCCccceEEEEc
Confidence 632 22322 127899999999999999999975 653333211 1111 3455 55689884 4467888887
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC--Cce
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GYS 335 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--G~~ 335 (358)
++ +.+.+.......+.+ .+....++..++++.+... ...++.++..++|++.|++. .+.
T Consensus 282 ~~---------------i~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~ 342 (425)
T PRK07495 282 AE---------------IMDAPGPGGLGGTYG-GNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVP 342 (425)
T ss_pred HH---------------HHhccCCCCcCCCCC-CCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 74 333332211112222 2333344444556655432 45566667777777777653 122
Q ss_pred eeeC-CCcceEEEEEcC
Q 018318 336 LVTG-GTENHLVLWDLR 351 (358)
Q Consensus 336 ~~~~-~~~~~~~~v~~~ 351 (358)
.... ....-.+|+.+.
T Consensus 343 ~i~~vrG~Gl~~~iel~ 359 (425)
T PRK07495 343 EIADIRGPGFMNAVEFN 359 (425)
T ss_pred CeeeeecCceEEEEEEe
Confidence 1110 123555677663
No 340
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.97 E-value=7.4e-08 Score=87.96 Aligned_cols=285 Identities=16% Similarity=0.168 Sum_probs=160.5
Q ss_pred cccccchHHHHHHHHHHHHhh--cceeEec-------cCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHH
Q 018318 11 SLETVDPEIHDLIEKEKRRQC--RGIELIA-------SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENL 81 (358)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~--~~~~l~a-------~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~ 81 (358)
.+..-+++.+.-+.+..+... ..++|.. +..++-+.|.+|-...+.+.....| .+.+....+-+
T Consensus 4 ~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Y------l~i~G~~~f~~- 76 (396)
T COG1448 4 KIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNY------LPIEGLPEFLE- 76 (396)
T ss_pred ccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccccccc------CCcCCcHHHHH-
Confidence 445555665444544434333 3456553 3445568888887665554433233 33333444432
Q ss_pred HHHHHHHhcCCCC-----CCCCccccccCChHHHHHHHHhh--cCCCCeEEEecCCCCccccccccccCCccccccccee
Q 018318 82 CRSRALQTFHLDP-----TQWGVNVQPYSGSPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYF 154 (358)
Q Consensus 82 ~~~~la~~~g~~~-----~~~~~~v~~~sGt~a~~~~l~a~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 154 (358)
...+-+||.+. ..+ +.+.+.+||.|+..+..-+ ..|...|.+++|+.+.|-. .....|..+
T Consensus 77 --~~~~llFG~d~~~l~~~Rv-~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~---------If~~aGl~v 144 (396)
T COG1448 77 --AVQKLLFGADSPALAEDRV-ATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA---------IFEAAGLEV 144 (396)
T ss_pred --HHHHHhcCCCcHHHHhhhH-hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH---------HHHhcCCce
Confidence 23345778442 112 3467788999988876554 5577789999988776542 123456554
Q ss_pred EEeecccCCCCCCCCHHHHHHHHhhcCCc-EEEEcC-CCCCC-----ccchHHHHHHHHHhCCEEEEechhhhhhhhccc
Q 018318 155 ESLPYKVNSSTGYIDYDKLEEKALDFRPK-LIICGG-SAYPR-----DWDYARFRAVADKCGALLLCDMAHISGLVAAQE 227 (358)
Q Consensus 155 ~~~~~~~~~~~~~id~~~l~~~l~~~~~~-~v~~~~-~~~~~-----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~ 227 (358)
+..++ +|.++..+|++.+-..|++-..+ +|++.. .+||+ ....++|.++.++.+.+.++|-| +.|+...
T Consensus 145 ~~Y~Y-yd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~G-- 220 (396)
T COG1448 145 ETYPY-YDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA-YQGFADG-- 220 (396)
T ss_pred eeeec-cccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh-hhhhccc--
Confidence 43332 14456779999988888764433 444321 34442 23467999999999999999999 5665432
Q ss_pred cCCC---C----C-cc-cEEEecCCccC--CCCCee-EEEEeCCCCCCCCCCCCCccccHHH----HhhhhcCCCCcCCC
Q 018318 228 AANP---F----E-YC-HIVTTTTHKSL--RGPRAG-MIFYRKGPKPPKKGQPEGAVYDFED----KINFAVFPSLQGGP 291 (358)
Q Consensus 228 ~~~~---~----~-~~-d~~~~s~~K~l--~g~~gG-~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 291 (358)
+..+ + . +. -+++.|++|.| +|-|-| +.+....- +... .+...... ..++|
T Consensus 221 leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~-------------~~a~~v~sqlk~~iR~-~ySnP 286 (396)
T COG1448 221 LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDA-------------EEADRVLSQLKAIIRT-NYSNP 286 (396)
T ss_pred hHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCH-------------HHHHHHHHHHHHHHHh-ccCCC
Confidence 1111 1 1 22 37888999986 566754 33333210 2222 22221111 22344
Q ss_pred ChhHHHHHH-----HHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 292 HNHQIGALA-----VALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 292 ~~~~~~al~-----~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
..+...-.+ ..|+..=+.++..+++|+.+.++.|.+.|++.
T Consensus 287 P~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~ 332 (396)
T COG1448 287 PAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKAL 332 (396)
T ss_pred chhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 433322111 11222112456788899999999999999984
No 341
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.96 E-value=7.5e-08 Score=93.01 Aligned_cols=256 Identities=16% Similarity=0.062 Sum_probs=126.0
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCC-ccccc-cCChHHHHHHHHhhc--C
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWG-VNVQP-YSGSPANFAAYTAVL--E 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~-~~v~~-~sGt~a~~~~l~a~~--~ 119 (358)
+|.|.+|+.+.+... ++.....+ ..+...++ .+++.+++..+.. .. ..+++ +||++|+..++.... .
T Consensus 57 ~p~v~~ai~~ql~~~---~~~~~~~~-~~~~~~~l----ae~l~~~~~~~~~-~~~~~~f~~~sGseA~e~AlklAr~~t 127 (425)
T PRK09264 57 NPVLKQALIDYLQRD---GITHGLDM-HTTAKREF----LETFEETILKPRG-LDYKVQFTGPTGTNAVEAALKLARKVT 127 (425)
T ss_pred CHHHHHHHHHHHHhc---cccccccc-CcHHHHHH----HHHHHHhhcCCcC-CCceEEEeCCCHHHHHHHHHHHHHHhc
Confidence 799999998877531 11110011 11222222 3556665422210 00 12333 699999999987662 2
Q ss_pred CCCeEEEecCCCCccccccccccCCccc-c-ccc---ceeEEeecccCCCCCCCCHHHHHHHHhhc-----CCcEEEEcC
Q 018318 120 PHDRIMGLDLPSGGHLTHGYYTSGGKKI-S-ATS---IYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPKLIICGG 189 (358)
Q Consensus 120 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~-~~g---~~~~~~~~~~~~~~~~id~~~l~~~l~~~-----~~~~v~~~~ 189 (358)
...+|+.....|.|.-.... ...+... + ..+ ..+..++++.......-|+++++++++++ ++.+|++..
T Consensus 128 gr~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Ep 206 (425)
T PRK09264 128 GRTNIVAFTNGFHGMTLGSL-AVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVET 206 (425)
T ss_pred CCCeEEEECCccCCccHHHH-HhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEec
Confidence 33577777655544311000 0000000 0 000 01122222110000013778889888642 245667653
Q ss_pred C--CCCC----ccchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCC--CCCeeEEEEeC
Q 018318 190 S--AYPR----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR--GPRAGMIFYRK 258 (358)
Q Consensus 190 ~--~~~~----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~--g~~gG~i~~~~ 258 (358)
. +.|. ...+++|.++|++||+++|+|++|. |+...+... ...+ ..|++++ .|.|+ |.+.|++++++
T Consensus 207 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~--~K~l~~~G~pigav~~~~ 283 (425)
T PRK09264 207 VQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTL--SKSISGYGLPMALVLIKP 283 (425)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEe--ccccCCCccceEEEEEch
Confidence 2 2232 2358999999999999999999985 432222110 1122 5687655 59884 33458888876
Q ss_pred CCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 259 GPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
+ +. .+.......+.+ .++...++..+++..+..+ +...++++++.++|++.|++
T Consensus 284 ~---------------i~-~~~~~~~~~T~~-gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~ 337 (425)
T PRK09264 284 E---------------LD-VWKPGEHNGTFR-GNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEE 337 (425)
T ss_pred h---------------hh-ccCCCccCCCCC-CCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHH
Confidence 4 21 111111111111 2333344434555332221 24566777778888877765
No 342
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.96 E-value=1.5e-07 Score=91.15 Aligned_cols=253 Identities=17% Similarity=0.072 Sum_probs=128.1
Q ss_pred CHHHHHHHhcccccCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EP 120 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~ 120 (358)
+|+|.+|+.+.+.... +... .+. .+... +..++|.+++.....+ ...+++||++|+..++.... ..
T Consensus 72 ~p~v~~Ai~~ql~~~~---~~~~~~~~--~~~~~----~lAe~L~~~~p~~~~~--~v~f~~SGsEA~e~AlklAr~~tg 140 (441)
T PRK05769 72 HPKVVKAVKEQAEKFL---HYSLTDFY--YEPAV----ELAERLVEIAPGGFEK--KVFFTNSGTESNEAAIKIARYHTG 140 (441)
T ss_pred CHHHHHHHHHHHHhcc---CccCcccC--CHHHH----HHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHHhC
Confidence 6999999988775321 1111 111 12222 2346677766421101 23567899999999987652 23
Q ss_pred CCeEEEecCCCCccccccc-cccCCcccc---c--ccceeEEeecccCC------CCC----CCCHHHHHH-HHhh----
Q 018318 121 HDRIMGLDLPSGGHLTHGY-YTSGGKKIS---A--TSIYFESLPYKVNS------STG----YIDYDKLEE-KALD---- 179 (358)
Q Consensus 121 gd~Vl~~~~~~~~~~~~~~-~~~~~~~~~---~--~g~~~~~~~~~~~~------~~~----~id~~~l~~-~l~~---- 179 (358)
..+|+.....|.|...... .+.. .... . ...++..++++... .+. .-+++.+++ .+++
T Consensus 141 r~~Ii~~~~~yHG~t~~~ls~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~ 219 (441)
T PRK05769 141 RKYIIAFLGAFHGRTYGSLSLTAS-KPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPP 219 (441)
T ss_pred CCeEEEECCCcCCccHHHHHhcCC-CcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCC
Confidence 4578777655544321000 0000 0000 0 00011112221000 000 012344666 3321
Q ss_pred cCCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCC-CC
Q 018318 180 FRPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GP 249 (358)
Q Consensus 180 ~~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~-g~ 249 (358)
.++.+|++... +.|...+ +++|.++|++||+++|+|++|. |+...+... ..++ ..|+++ +.|.++ |.
T Consensus 220 ~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt--~~K~l~~G~ 296 (441)
T PRK05769 220 EEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIIT--LAKAIAGGL 296 (441)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEE--EcccccCCc
Confidence 23566676532 2344455 9999999999999999999986 543333211 1122 458875 569885 44
Q ss_pred CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 018318 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (358)
Q Consensus 250 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (358)
+.|+++++++ +.+.+... ...+.++ +...+++..++++.+. + ...++..++.++|++.|
T Consensus 297 p~gav~~~~~---------------i~~~~~~~-~~~T~~g-~p~~~aaa~a~L~~l~--~--~~~~~~~~~g~~l~~~L 355 (441)
T PRK05769 297 PLGAVIGRAE---------------LMFLPPGS-HANTFGG-NPVAAAAALATLEELE--E--GLLENAQKLGEYLRKEL 355 (441)
T ss_pred ccEEEEEehh---------------hhhcCCCC-CCCCCCc-CHHHHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHHH
Confidence 5677888774 22222111 1112222 3333444445555543 2 55677888888888888
Q ss_pred hhC
Q 018318 330 TGK 332 (358)
Q Consensus 330 ~~~ 332 (358)
++.
T Consensus 356 ~~l 358 (441)
T PRK05769 356 KEL 358 (441)
T ss_pred HHH
Confidence 764
No 343
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.95 E-value=7.6e-08 Score=92.93 Aligned_cols=256 Identities=13% Similarity=0.018 Sum_probs=134.7
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~---- 119 (358)
+|+|.+++.+.+.. .+..... .+ .... ..+ ..+++.++++...+ ...+++||++|+..++...+.
T Consensus 63 ~p~v~~ai~~~~~~-~~~~~~~-~~-~~~~-~~~----la~~l~~~~~~~~~---~v~f~~sGseA~e~AlklAr~~~~~ 131 (427)
T TIGR00508 63 HPRLNAAAQKQIDK-MSHVMFG-GF-THKP-AIE----LCQKLVKMTPNALD---CVFLADSGSVAVEVALKMALQYWQA 131 (427)
T ss_pred CHHHHHHHHHHHHh-cCCcccc-cc-CCHH-HHH----HHHHHHhhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 79999999887753 2111111 11 1112 112 23667777653322 246677999999998876531
Q ss_pred ---C-CCeEEEecCCCCccccccccccCCc-c-cc--cccc--eeEEeecccCC---CCCCCCHHHHHHHHhhc--CCcE
Q 018318 120 ---P-HDRIMGLDLPSGGHLTHGYYTSGGK-K-IS--ATSI--YFESLPYKVNS---STGYIDYDKLEEKALDF--RPKL 184 (358)
Q Consensus 120 ---~-gd~Vl~~~~~~~~~~~~~~~~~~~~-~-~~--~~g~--~~~~~~~~~~~---~~~~id~~~l~~~l~~~--~~~~ 184 (358)
+ ..+|+.....|.|...... ...+. . .. ..+. .....+.+... +...-|++++++++++. +..+
T Consensus 132 ~~~~~r~~il~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaa 210 (427)
T TIGR00508 132 KGEKNRQKFLTIRSGYHGDTFGAM-SVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAA 210 (427)
T ss_pred hCCCCccEEEEEcCCcCCccHhhh-cccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEE
Confidence 2 3578888766655421100 00000 0 00 0000 00111111000 00112567888888643 3456
Q ss_pred EEEcC--CCCC-----CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc--CCCCC-cccEEEecCCccCCCC--Cee
Q 018318 185 IICGG--SAYP-----RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLRGP--RAG 252 (358)
Q Consensus 185 v~~~~--~~~~-----~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~~~~-~~d~~~~s~~K~l~g~--~gG 252 (358)
|+++. ...+ ....+++|.++|++||+++|+|++| .|+...+.. ...++ ..|+++ +.|.|+|. ..+
T Consensus 211 vivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG~~p~~ 287 (427)
T TIGR00508 211 VILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKALTGGYMTLS 287 (427)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhhhcCcccce
Confidence 77664 2222 2346899999999999999999998 565333321 11122 568776 68988432 446
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhc-----CCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-----FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~ 327 (358)
.++.++ ++.+.+.... ...+.+ .++..+++..++++.+.. +...++++++.++|++
T Consensus 288 a~~~~~---------------~~~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~ 348 (427)
T TIGR00508 288 ATVTTD---------------KVAQTISSGEAGCFMHGPTFM-GNPLACAVAEASLAILLE---GEWQKQVSAIENQLKR 348 (427)
T ss_pred EEEEcH---------------HHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHH
Confidence 666655 3444443210 111111 234444554556665533 2446788888999999
Q ss_pred HHhhCC
Q 018318 328 YLTGKG 333 (358)
Q Consensus 328 ~L~~~G 333 (358)
.|++.+
T Consensus 349 ~L~~l~ 354 (427)
T TIGR00508 349 ELSPLR 354 (427)
T ss_pred HHHHhh
Confidence 998764
No 344
>PRK06062 hypothetical protein; Provisional
Probab=98.94 E-value=1.3e-07 Score=91.97 Aligned_cols=251 Identities=12% Similarity=0.003 Sum_probs=125.8
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|+|.+|+.+.+.... +....+ ..+...++ .++|.++.....+ ...+++||++|+..++.... ...
T Consensus 71 ~p~v~~Ai~~q~~~~~---~~~~~~--~~~~~~~l----ae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~tgr 138 (451)
T PRK06062 71 HPKVVAAIQEQAARLC---TVAPAH--ANDARSEA----ARLIAERAPGDLS---KVFFTNGGADANEHAVRMARLHTGR 138 (451)
T ss_pred CHHHHHHHHHHHHhcC---CcCCcc--CCHHHHHH----HHHHHHhCCCCCC---EEEEcCChHHHHHHHHHHHHHhhCC
Confidence 7999999988775321 111111 12222223 3667777643222 23566889999999987652 234
Q ss_pred CeEEEecCCCCccccccccccCCcccc------cccceeEEeecccCCC-CC--CCC-------HHHHHHHHhhc---CC
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKIS------ATSIYFESLPYKVNSS-TG--YID-------YDKLEEKALDF---RP 182 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~-~~--~id-------~~~l~~~l~~~---~~ 182 (358)
.+|+.....|.|...... ...+.... ..+ +...+.+.... .+ ..| +++++++++.+ ++
T Consensus 139 ~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~i 215 (451)
T PRK06062 139 PKVLSAYRSYHGGTGSAI-NLTGDPRRWPNDTGRAG--VVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTI 215 (451)
T ss_pred ceEEEEeCCCCCCCHHHH-hhcCCcccccCCCCCCC--CEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCce
Confidence 578777655544321000 00000000 001 11111111000 00 012 67788888632 34
Q ss_pred cEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc--CCCCC-cccEEEecCCccCCCC--Ce
Q 018318 183 KLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLRGP--RA 251 (358)
Q Consensus 183 ~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~~~~-~~d~~~~s~~K~l~g~--~g 251 (358)
.+|++... +.|...+ +++|.++|++||+++|+|++|. |+...+.. ...++ ..|++ ++.|.|+|. +.
T Consensus 216 AaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~--t~gK~lggG~~Pi 292 (451)
T PRK06062 216 AAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLI--TFAKGVNSGYVPL 292 (451)
T ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCee--eechhhhcCCcCc
Confidence 56777632 2334445 8999999999999999999986 43222211 01122 56866 458998652 44
Q ss_pred eEEEEeCCCCCCCCCCCCCccccHHHHhhhhc--CCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHH-HHHHHH
Q 018318 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV--FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANA-VALGNY 328 (358)
Q Consensus 252 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~-~~l~~~ 328 (358)
|.++++++ +.+.+.... ...+.+ .++..+++..++++.+.++ ...++..+.. ++|++.
T Consensus 293 gav~~~~~---------------i~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~G~~~l~~~ 353 (451)
T PRK06062 293 GGVAISEA---------------IAATFADRPYPGGLTYS-GHPLACAAAVATINAMEEE---GIVENAARIGAEVLGPG 353 (451)
T ss_pred EEEEEcHH---------------HHHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence 55556553 444443211 111222 2334444445556655432 3444455554 456555
Q ss_pred Hhh
Q 018318 329 LTG 331 (358)
Q Consensus 329 L~~ 331 (358)
|++
T Consensus 354 L~~ 356 (451)
T PRK06062 354 LRE 356 (451)
T ss_pred HHH
Confidence 554
No 345
>PRK06149 hypothetical protein; Provisional
Probab=98.93 E-value=1.9e-07 Score=98.76 Aligned_cols=252 Identities=12% Similarity=0.007 Sum_probs=126.3
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh--cCCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~--~~~g 121 (358)
+|+|.+|+.+.+.... ..+++. .+...++. ++|++++.-..+ ..++++||++|+..++... ....
T Consensus 601 hp~v~~Ai~~q~~~l~----~~~~~~--~~~~~ela----e~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tgr 667 (972)
T PRK06149 601 HPRLAAAAARQWSLLN----TNSRFH--YAAVAEFS----ERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASGR 667 (972)
T ss_pred CHHHHHHHHHHHHhcc----cccccc--CHHHHHHH----HHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcCC
Confidence 7999999988765321 112221 23333444 678887732111 2466789999999998744 2223
Q ss_pred CeEEEecCCCCcccccc-ccccC-Cccccccc---ceeEEeecccCCC-CC-CCC-----HHHHHHHHhh-----cCCcE
Q 018318 122 DRIMGLDLPSGGHLTHG-YYTSG-GKKISATS---IYFESLPYKVNSS-TG-YID-----YDKLEEKALD-----FRPKL 184 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~-~~~~~-~~~~~~~g---~~~~~~~~~~~~~-~~-~id-----~~~l~~~l~~-----~~~~~ 184 (358)
.+|+.....|.|..... ..+.. .......+ ..+..++.+-... .+ ..| .+++++.+++ .++.+
T Consensus 668 ~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAa 747 (972)
T PRK06149 668 RDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAG 747 (972)
T ss_pred CeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEE
Confidence 46776665544321000 00000 00000000 0011111110000 00 112 2444444432 23456
Q ss_pred EEEcC--CCCCCccc----hHHHHHHHHHhCCEEEEechh-hhhhhhccccCCC---CC-cccEEEecCCccCCC-CCee
Q 018318 185 IICGG--SAYPRDWD----YARFRAVADKCGALLLCDMAH-ISGLVAAQEAANP---FE-YCHIVTTTTHKSLRG-PRAG 252 (358)
Q Consensus 185 v~~~~--~~~~~~~~----l~~i~~la~~~g~~lvvD~a~-~~g~~~~~~~~~~---~~-~~d~~~~s~~K~l~g-~~gG 252 (358)
|++.. .+.|...+ +++|.++|++||+++|+||+| +.|-. |....- ++ ..|++ ++.|.++| .+.|
T Consensus 748 vI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRt--G~~~~a~e~~gv~PDiv--t~gK~lg~G~Pl~ 823 (972)
T PRK06149 748 FICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRL--GHYFWGFEQQGVVPDII--TMAKGMGNGHPLG 823 (972)
T ss_pred EEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCcc--CccchhhhhcCCCCCEE--EecccccCCeeeE
Confidence 67653 22344445 899999999999999999998 33332 211101 12 56887 55899864 3457
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhh-hcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINF-AVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
+++++++ +.+.+.. ..+..+. +.++...++..++++.+.++ ...++..+.-++|++.|++
T Consensus 824 av~~~~~---------------i~~~~~~~~~~~sT~-~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~ 884 (972)
T PRK06149 824 AVITRRE---------------IAEALEAEGYFFSST-GGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEA 884 (972)
T ss_pred EEEEcHH---------------HHhhhccCCcccCCC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 7888774 4444432 1111111 22334444444556655432 3455566666777777765
No 346
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.92 E-value=1.8e-07 Score=89.93 Aligned_cols=274 Identities=14% Similarity=0.054 Sum_probs=132.7
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC--CCCCCccccc-cCChHHHHHHHHhhc--
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PTQWGVNVQP-YSGSPANFAAYTAVL-- 118 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~--~~~~~~~v~~-~sGt~a~~~~l~a~~-- 118 (358)
+|.|.+|+.+.+... ++...... ..+...+ ..++|.++...+ ... ..+++ +||++|+..++....
T Consensus 53 ~p~v~~ai~~ql~~~---~~~~~~~~-~~~~~~~----lae~l~~~~~~~~~~~~--~~~f~~~sGseA~e~AlklAr~~ 122 (412)
T TIGR02407 53 NPKLKQALIDYLADD---GIIHSLDM-ATEAKRE----FLETFNEIILKPRGLDY--KVQFPGPTGTNAVESALKLARKV 122 (412)
T ss_pred CHHHHHHHHHHHhhc---cceecccc-CcHHHHH----HHHHHHHhccCccCCCc--eEEEeCCCchHHHHHHHHHHhhh
Confidence 799999998877532 11111101 1122222 235666653211 110 12333 699999999987663
Q ss_pred CCCCeEEEecCCCCccccccccccCCccc--cccc---ceeEEeecccCCCCCCCCHHHHHHHHhhc-----CCcEEEEc
Q 018318 119 EPHDRIMGLDLPSGGHLTHGYYTSGGKKI--SATS---IYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPKLIICG 188 (358)
Q Consensus 119 ~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~--~~~g---~~~~~~~~~~~~~~~~id~~~l~~~l~~~-----~~~~v~~~ 188 (358)
....+|+.....|.|.-.... ...+... ...+ ..+..++++-......-+++.+++.++++ ++.+|++.
T Consensus 123 tgr~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~E 201 (412)
T TIGR02407 123 TGRSNVVSFTNAFHGMTLGSL-SVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILE 201 (412)
T ss_pred cCCCeEEEECCCcCCchHHHH-HhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEec
Confidence 234578877765544321000 0000000 0000 01112222100000013477788888642 34667765
Q ss_pred CC--CCCC----ccchHHHHHHHHHhCCEEEEechhhhhhhhcccc-C-CCCC-cccEEEecCCccCC--CCCeeEEEEe
Q 018318 189 GS--AYPR----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSLR--GPRAGMIFYR 257 (358)
Q Consensus 189 ~~--~~~~----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-~-~~~~-~~d~~~~s~~K~l~--g~~gG~i~~~ 257 (358)
.. ..+. ..-+++|.++|++||+++|+|++|. |+...+.. . ...+ ..|++++ .|+++ |.+.|+++++
T Consensus 202 pi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v~PDi~~~--~K~lg~~G~pigav~~~ 278 (412)
T TIGR02407 202 TVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGIEPDIVCL--SKSISGYGLPLALTLIK 278 (412)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCCCCCEEEe--chhccCCccceeEEEEc
Confidence 32 2232 1238899999999999999999975 43222211 0 1122 5687764 59985 4456888887
Q ss_pred CCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh----CC
Q 018318 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG----KG 333 (358)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~G 333 (358)
++ + +.+.......+. +.+....++..++++.+..+ ....++..+..++|++.|+. .+
T Consensus 279 ~~---------------~-~~~~~~~~~~T~-~gnpl~~aaa~a~l~~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~~ 339 (412)
T TIGR02407 279 PE---------------L-DVWKPGEHNGTF-RGNNLAFVTATAALEYYWSD--DAFEKAVQRKSEIIQERLDRIVAEYP 339 (412)
T ss_pred hh---------------h-hccCCCccCCCC-CccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 64 2 111111111111 12333344434556642222 23455566666777776654 22
Q ss_pred -ceeeeCCCcceEEEEEcC
Q 018318 334 -YSLVTGGTENHLVLWDLR 351 (358)
Q Consensus 334 -~~~~~~~~~~~~~~v~~~ 351 (358)
+. ......+..+|+.+.
T Consensus 340 ~~~-~~vrg~Gl~~~l~l~ 357 (412)
T TIGR02407 340 ELI-KQVRGRGLMQGIECG 357 (412)
T ss_pred Cce-EeeecceeEEEEEec
Confidence 21 111234556677663
No 347
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.92 E-value=2.9e-07 Score=88.82 Aligned_cols=286 Identities=12% Similarity=0.044 Sum_probs=144.1
Q ss_pred cceeEecc--CCC---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+..+ ... -+|+|.+|+.+.+.... +.....+. .+...+ ..+++.+.+....+ ...+++||
T Consensus 45 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~~~~~-~~~~~~----lae~L~~~~p~~~~---~v~f~~sG 113 (429)
T PRK06173 45 RLIDGMSSWWAALHGYNHPRLNAAATNQLAKMS---HIMFGGFT-HEPAVE----LAQKLLEILPPSLN---KIFFADSG 113 (429)
T ss_pred EEEEccchHHhccCCCCCHHHHHHHHHHHHhcC---CccccccC-CHHHHH----HHHHHHhhCCCCcC---EEEEeCCc
Confidence 45666543 222 37999999888775321 11110011 122222 33667776642222 23566889
Q ss_pred hHHHHHHHHhhcC-------CC-CeEEEecCCCCccccccccccCCcccccc---c---ceeEEeecccCC--CC-CCCC
Q 018318 107 SPANFAAYTAVLE-------PH-DRIMGLDLPSGGHLTHGYYTSGGKKISAT---S---IYFESLPYKVNS--ST-GYID 169 (358)
Q Consensus 107 t~a~~~~l~a~~~-------~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~---g---~~~~~~~~~~~~--~~-~~id 169 (358)
++|+..++..... +| .+|+.....|.|.- .+..+..+...... + ..+..++.+... .. ...+
T Consensus 114 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t-~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 192 (429)
T PRK06173 114 SVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDT-WHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEA 192 (429)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcc-hhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHH
Confidence 9999999876531 33 46887776655431 11000000000000 0 001111211000 00 0124
Q ss_pred HHHHHHHHhhc--CCcEEEEcCC--CC-CCc-cc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccE
Q 018318 170 YDKLEEKALDF--RPKLIICGGS--AY-PRD-WD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHI 237 (358)
Q Consensus 170 ~~~l~~~l~~~--~~~~v~~~~~--~~-~~~-~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~ 237 (358)
++.+++.++++ ++.+|+++.. .. |.. .| +++|.++|++||+++|+|++| .|+...+... ..++ ..|+
T Consensus 193 l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi 271 (429)
T PRK06173 193 IEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDI 271 (429)
T ss_pred HHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCE
Confidence 67778888632 3567777642 12 222 22 789999999999999999999 6753223210 1122 5687
Q ss_pred EEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-----cCCCCcCCCChhHHHHHHHHHHHhccHH
Q 018318 238 VTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-----VFPSLQGGPHNHQIGALAVALKQASTPA 310 (358)
Q Consensus 238 ~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~al~~al~~~~~~~ 310 (358)
++ +.|.|+|. +.+.++.+++ +.+.+... .+..+.+ .++..+++..++++.+.++
T Consensus 272 v~--~gK~l~gG~~p~~a~~~~~~---------------i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~i~~~- 332 (429)
T PRK06173 272 MC--IGKALTGGYLTLSATITTEA---------------IAQTICSGEAKCFMHGPTFM-ANPLACAIAAESIRLLLES- 332 (429)
T ss_pred EE--eehhhhCCccccceEEecHH---------------HHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhC-
Confidence 76 68988532 4555556553 33333210 1111111 2334445545566655432
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC-CceeeeC-CCcceEEEEEcC
Q 018318 311 FKAYAKQVKANAVALGNYLTGK-GYSLVTG-GTENHLVLWDLR 351 (358)
Q Consensus 311 ~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~-~~~~~~~~v~~~ 351 (358)
...++++++.++|++.|++. ++..... ...+.++-|.+.
T Consensus 333 --~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~ 373 (429)
T PRK06173 333 --PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMK 373 (429)
T ss_pred --CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeC
Confidence 34777888889999988864 4432211 134555555553
No 348
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.89 E-value=3.2e-07 Score=88.51 Aligned_cols=266 Identities=11% Similarity=-0.022 Sum_probs=130.8
Q ss_pred cceeEeccC--C---CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC-CCCCCccccccC
Q 018318 32 RGIELIASE--N---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYS 105 (358)
Q Consensus 32 ~~~~l~a~~--~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~v~~~s 105 (358)
+++.+..+- . .-+|+|.+|+.+.+.... +...... ..+...+ ..++|.+++... .+ ..++++|
T Consensus 34 ~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~---~~~~~~~-~~~~~~~----la~~l~~~~p~~~~~---~v~f~~s 102 (420)
T TIGR00700 34 RLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFT---HTCFMVT-PYEGYVA----LAEKLNRIAPGSGPK---KSVFFNS 102 (420)
T ss_pred EEEECccCHHhccCCCCCHHHHHHHHHHHHhcc---Ccccccc-CChHHHH----HHHHHHHhCCCCCCC---EEEEeCC
Confidence 456665542 2 237999999988875421 1111101 1121212 235677766422 11 2466789
Q ss_pred ChHHHHHHHHhhc--CCCCeEEEecCCCCccccccccccCCccc-cccc-----ceeEEeecccCCCC--------CCCC
Q 018318 106 GSPANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKKI-SATS-----IYFESLPYKVNSST--------GYID 169 (358)
Q Consensus 106 Gt~a~~~~l~a~~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~~g-----~~~~~~~~~~~~~~--------~~id 169 (358)
|++|+..++.... ....+|+.....|.|...... ...+... ...+ .++..++++..... ..-+
T Consensus 103 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (420)
T TIGR00700 103 GAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTM-ALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGE 181 (420)
T ss_pred cHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHH-HhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHH
Confidence 9999999987652 233467777655544321000 0000000 0000 01111222110000 0012
Q ss_pred HHHHHHHHh----hcCCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-ccc
Q 018318 170 YDKLEEKAL----DFRPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCH 236 (358)
Q Consensus 170 ~~~l~~~l~----~~~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d 236 (358)
++.+++.+. ..+..+|++... +.+...+ +++|.++|++||+++|+|+++. |+...+... ...+ ..|
T Consensus 182 ~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-g~gr~g~~~a~~~~~~~pD 260 (420)
T TIGR00700 182 LAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQT-GFARTGAMFACEHEGPEPD 260 (420)
T ss_pred HHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccchhHHHhhcCCCCC
Confidence 556777663 123566777632 2232222 8999999999999999999964 543333211 1122 457
Q ss_pred EEEecCCccCC-CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHH
Q 018318 237 IVTTTTHKSLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (358)
Q Consensus 237 ~~~~s~~K~l~-g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~ 315 (358)
+++ ++|.++ |.+.|+++++++ +.+.+.......+.+ .+....++..++++.+... ...
T Consensus 261 i~~--lsK~l~~G~pig~v~~~~~---------------i~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~l~~~---~~~ 319 (420)
T TIGR00700 261 LIT--TAKSLADGLPLSGVTGRAE---------------IMDAPAPGGLGGTYA-GNPLACAAALAVLAIIESE---GLI 319 (420)
T ss_pred EEE--eeccccCCcceEEEEecHH---------------HHhhcCCCCcCCCCC-cCHHHHHHHHHHHHHHHhc---cHH
Confidence 654 789884 567788888773 433333211112222 2333344444556554332 334
Q ss_pred HHHHHHHHHHHHHHhh
Q 018318 316 KQVKANAVALGNYLTG 331 (358)
Q Consensus 316 ~~~~~~~~~l~~~L~~ 331 (358)
++..+..+++++.|++
T Consensus 320 ~~~~~~g~~l~~~L~~ 335 (420)
T TIGR00700 320 ERARQIGRLVTDRLTT 335 (420)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4455555566666654
No 349
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.88 E-value=5.5e-07 Score=87.36 Aligned_cols=267 Identities=17% Similarity=0.053 Sum_probs=134.7
Q ss_pred cceeEecc--CCC---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+..+ ... -+|+|.+++.+.+..-. .... ..+ ..+...+ ..++|.+++....+ ...+++||
T Consensus 50 ~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~-~~~~-~~~--~~~~~~~----la~~L~~~~p~~~~---~v~f~~sG 118 (445)
T PRK09221 50 KILDGTAGLWCCNAGHGRPEIVEAVARQAATLD-YAPA-FQM--GHPLAFE----LAERLAELAPGGLD---HVFFTNSG 118 (445)
T ss_pred EEEEccccHhhccCCCCCHHHHHHHHHHHHhcc-Cccc-ccc--CCHHHHH----HHHHHHHhCCCCCC---EEEEeCCc
Confidence 45666544 222 37999999988775321 1111 011 1232222 33667777643222 23567899
Q ss_pred hHHHHHHHHhhc------C-C-CCeEEEecCCCCccccccccccCCccc--cccc---ceeEEeeccc-CCCC-C-----
Q 018318 107 SPANFAAYTAVL------E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKI--SATS---IYFESLPYKV-NSST-G----- 166 (358)
Q Consensus 107 t~a~~~~l~a~~------~-~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~--~~~g---~~~~~~~~~~-~~~~-~----- 166 (358)
++|+..++.... . + ..+|+.....|.|... +.....+... ...+ ..+..++++. .... .
T Consensus 119 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~-gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
T PRK09221 119 SESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGF-GGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQP 197 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccch-hhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChH
Confidence 999999887542 1 1 3478877766554311 0000000000 0000 0011121110 0000 0
Q ss_pred ---CCCHHHHHHHHhhc---CCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc--CCCC
Q 018318 167 ---YIDYDKLEEKALDF---RPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPF 232 (358)
Q Consensus 167 ---~id~~~l~~~l~~~---~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~~~ 232 (358)
.-..++++++++.. ++.+|+++.. ..|...+ +++|.++|++||+++|+|++|. |+...+.. ...+
T Consensus 198 ~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~~~~~~ 276 (445)
T PRK09221 198 EHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAAFAAERF 276 (445)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCCcCchhhHHHhc
Confidence 01135778877643 3456777632 2344455 8999999999999999999985 43221211 0111
Q ss_pred C-cccEEEecCCccCCC--CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-------cCCCCcCCCChhHHHHHHHH
Q 018318 233 E-YCHIVTTTTHKSLRG--PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQIGALAVA 302 (358)
Q Consensus 233 ~-~~d~~~~s~~K~l~g--~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~al~~a 302 (358)
+ ..|++ ++.|.++| .+.|.++++++ +.+.+... ....+.+ .++..+++..++
T Consensus 277 gv~PDi~--~~gK~l~gG~~Pi~av~~~~~---------------i~~~~~~~~~~~~~~~~~~T~~-~~pl~~aaa~a~ 338 (445)
T PRK09221 277 GVTPDII--TFAKGLTNGAIPMGAVIASDE---------------IYDAFMQGPEYAIEFFHGYTYS-AHPVACAAGLAT 338 (445)
T ss_pred CCCCCEE--EeccccccCcccceeeEEcHH---------------HHHhhccCcccccccccccCCC-cCHHHHHHHHHH
Confidence 2 45765 55788753 34566666663 33322110 0111222 233334444455
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 303 LKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++.+.++ ...++..++.++|++.|++.
T Consensus 339 L~~i~~~---~l~~~~~~~g~~l~~~l~~l 365 (445)
T PRK09221 339 LDIYREE---DLFERAAELAPYFEDAVHSL 365 (445)
T ss_pred HHHHHhc---cHHHHHHHHHHHHHHHHHhh
Confidence 6655432 45778888889999988765
No 350
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.87 E-value=1.9e-07 Score=89.93 Aligned_cols=243 Identities=16% Similarity=-0.002 Sum_probs=128.9
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~---- 119 (358)
+|+|.+|+.+.+..-. +.....+ ..+...+| .+++.++.....+ ...+++||++|+..++.....
T Consensus 58 ~p~i~~ai~~q~~~~~---~~~~~~~-~~~~~~~l----ae~L~~~~p~~~~---~v~f~~SGseA~e~AlklAr~~~~~ 126 (422)
T PRK05630 58 HPRLKAAAHKQIDTMS---HVMFGGL-THEPAIKL----TRKLLNLTDNGLD---HVFYSDSGSVSVEVAIKMALQYSKG 126 (422)
T ss_pred CHHHHHHHHHHHHhCC---CcccCCc-CCHHHHHH----HHHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 7999999988875321 1110001 11222223 3667776542221 235678999999998876521
Q ss_pred ---CC-CeEEEecCCCCccccccccccCCccccccc-------------ceeEEeecccCCCCCCCC-------HHHHHH
Q 018318 120 ---PH-DRIMGLDLPSGGHLTHGYYTSGGKKISATS-------------IYFESLPYKVNSSTGYID-------YDKLEE 175 (358)
Q Consensus 120 ---~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~id-------~~~l~~ 175 (358)
+| .+|+.....|.|.-... +...+ .....++.+. ....+ .+.+++
T Consensus 127 ~g~~~r~~ii~~~~~yHG~t~~a--------ls~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~ 195 (422)
T PRK05630 127 QGHPERTRLLTWRSGYHGDTFAA--------MSVCDPEGGMHSLWKGTLPEQIFAPAPP---VRGSSPQEISEYLRSLEL 195 (422)
T ss_pred cCCCCCcEEEEECCCcCCccHHH--------hccCCCcccccccccccCCCCeEcCCCc---ccCCChHHHHHHHHHHHH
Confidence 23 47888776655431100 11111 0011122110 00111 234555
Q ss_pred HHhhcCCcEEEEcCC---CCCC----ccchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCcc
Q 018318 176 KALDFRPKLIICGGS---AYPR----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKS 245 (358)
Q Consensus 176 ~l~~~~~~~v~~~~~---~~~~----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~ 245 (358)
.++ .+..+|+++.. ..+. ...+++|.++|++||+++|+|++| .|+...+... ...+ ..|++ ++.|.
T Consensus 196 ~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~--t~gK~ 271 (422)
T PRK05630 196 LID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIM--CVGKA 271 (422)
T ss_pred HHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCee--eeech
Confidence 554 36677777642 1222 234889999999999999999998 5653222110 1112 46777 56899
Q ss_pred CCC--CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh------cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHH
Q 018318 246 LRG--PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQ 317 (358)
Q Consensus 246 l~g--~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~ 317 (358)
++| +++|+++++++ +.+.+... ....+. +.++...++..++++.+.++ ...++
T Consensus 272 l~gG~~p~~av~~~~~---------------i~~~~~~~~~~~~~~h~~T~-~g~Pla~aaa~aaL~~l~~~---~~~~~ 332 (422)
T PRK05630 272 LTGGFMSFAATLCTDK---------------VAQLISTPNGGGALMHGPTF-MANPLACAVAHASLEIIETG---MWRKQ 332 (422)
T ss_pred hhcCccccceeeccHH---------------HHHHHhccCCCCccccCCCC-cCCHHHHHHHHHHHHHHHhC---cHHHH
Confidence 954 57788888774 43333211 011111 12334455545566665432 34567
Q ss_pred HHHHHHHHHHHHhh
Q 018318 318 VKANAVALGNYLTG 331 (358)
Q Consensus 318 ~~~~~~~l~~~L~~ 331 (358)
+.++.++|++.|+.
T Consensus 333 ~~~~g~~l~~~L~~ 346 (422)
T PRK05630 333 VKRIEAELIAGLSP 346 (422)
T ss_pred HHHHHHHHHHHHHH
Confidence 77788888887764
No 351
>PRK07480 putative aminotransferase; Validated
Probab=98.86 E-value=3.3e-07 Score=89.18 Aligned_cols=255 Identities=15% Similarity=0.043 Sum_probs=122.5
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~---- 119 (358)
+|+|.+|+.+.+..-. .......+ ..+...++ .++|.+++....+ ...+++||++|+..++.....
T Consensus 68 ~p~v~~Ai~~q~~~~~-~~~~~~~~--~~~~~~~l----ae~L~~~~p~~~~---~v~f~~SGseA~e~AlklAr~~~~~ 137 (456)
T PRK07480 68 RKELADAAARQMRELP-YYNTFFKT--THPPAIEL----AAKLAEVAPPGFN---HVFFTNSGSEANDTVLRMVRHYWAL 137 (456)
T ss_pred CHHHHHHHHHHHHhcC-Cccccccc--CCHHHHHH----HHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 7999999988875321 00010011 12322233 3677777753222 235678999999999876521
Q ss_pred ---CC-CeEEEecCCCCccccccccccCCccc-c-ccc---ceeEEeecccCCC-CCCCC--------HHHHHHHHhhc-
Q 018318 120 ---PH-DRIMGLDLPSGGHLTHGYYTSGGKKI-S-ATS---IYFESLPYKVNSS-TGYID--------YDKLEEKALDF- 180 (358)
Q Consensus 120 ---~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~-~-~~g---~~~~~~~~~~~~~-~~~id--------~~~l~~~l~~~- 180 (358)
+| .+|+.....|.|...... ...+... . ..+ ..+..++.+.... ....+ ++.+++.+.+.
T Consensus 138 ~g~~~r~~ii~~~~~yHG~tl~a~-s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 216 (456)
T PRK07480 138 KGKPQKKVIISRKNGYHGSTVAGA-SLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELG 216 (456)
T ss_pred cCCCCCcEEEEECCCcCCcchhhh-hccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcC
Confidence 33 467777655544321100 0000000 0 000 0011111110000 00011 35666555332
Q ss_pred --CCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCCCC
Q 018318 181 --RPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP 249 (358)
Q Consensus 181 --~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~g~ 249 (358)
++.+|++... ..|...+ +++|.++|++||+++|+||+|. |+...+... ..++ ..|++++ .|.++|.
T Consensus 217 ~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~--gK~l~gG 293 (456)
T PRK07480 217 ADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVIC-GFGRTGEWFGSQHFGIKPDLMTI--AKGLTSG 293 (456)
T ss_pred CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhhhhhcCCCCCeeee--ehhhccC
Confidence 3456777642 2233333 8899999999999999999974 432222110 1122 4677654 7988652
Q ss_pred --CeeEEEEeCCCCCCCCCCCCCccccHHHHhh--hh--cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHH-HHHH
Q 018318 250 --RAGMIFYRKGPKPPKKGQPEGAVYDFEDKIN--FA--VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQV-KANA 322 (358)
Q Consensus 250 --~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~-~~~~ 322 (358)
+.|.++++++ +.+.+. .. ....+.+ .++...++..++++.+.++ ...++. .+..
T Consensus 294 ~~Pi~av~~~~~---------------i~~~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~~g 354 (456)
T PRK07480 294 YIPMGAVGVGDR---------------VAEVLIEEGGEFNHGFTYS-GHPVAAAVALANLRILRDE---GIVERVRDDTG 354 (456)
T ss_pred CccceEEEEcHH---------------HHHHHhcCCCCcccCCCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHH
Confidence 3455556553 444331 11 1111222 2334444445556655432 334555 3556
Q ss_pred HHHHHHHhh
Q 018318 323 VALGNYLTG 331 (358)
Q Consensus 323 ~~l~~~L~~ 331 (358)
++|++.|++
T Consensus 355 ~~l~~~l~~ 363 (456)
T PRK07480 355 PYLQKRLRE 363 (456)
T ss_pred HHHHHHHHH
Confidence 666666654
No 352
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.85 E-value=4.6e-07 Score=88.23 Aligned_cols=247 Identities=16% Similarity=0.076 Sum_probs=129.7
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|.|.+|+.+.+.. .. +.++++ ..+...+|. ++|+++++...+ ..++++||++|+..++.... ...
T Consensus 89 ~p~v~~Ai~~ql~~-~~--~~~~~~--~~~~~~~la----e~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~tgr 156 (459)
T PRK06082 89 HPHVIEKVKEQMAK-LP--FSPRRF--TNETAIECA----EKLTEIAGGELN---RVLFAPGGTSAIGMALKLARHITGN 156 (459)
T ss_pred CHHHHHHHHHHHHh-CC--CccCcc--CCHHHHHHH----HHHHHhCCCCCC---EEEECCCcHHHHHHHHHHHHHhcCC
Confidence 79999999888753 21 211222 123344444 678888753222 24567889999999887652 233
Q ss_pred CeEEEecCCCCccccccccccCCcccccccc------------eeEEeecccCCCC--CCC------CHHHHHHHHhhc-
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSST--GYI------DYDKLEEKALDF- 180 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~--~~i------d~~~l~~~l~~~- 180 (358)
.+|+.....|.|... + .+.+.+. ++..++.+..... ... +++.+++.+++.
T Consensus 157 ~~ii~~~~~yHG~t~-~-------a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 228 (459)
T PRK06082 157 FKVVSLWDSFHGASL-D-------AISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEG 228 (459)
T ss_pred CEEEEEeCCCcCccH-H-------HHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCC
Confidence 678777655444310 0 0011110 0111111100000 011 135677777532
Q ss_pred CCcEEEEcCCC-CCC-ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCCCC--C
Q 018318 181 RPKLIICGGSA-YPR-DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP--R 250 (358)
Q Consensus 181 ~~~~v~~~~~~-~~~-~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~g~--~ 250 (358)
+..+|++.... .+. ..| +++|.++|++||+++|+||+|. |+...+... ..++ ..|+++ +.|.++|. +
T Consensus 229 ~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P 305 (459)
T PRK06082 229 GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVP 305 (459)
T ss_pred CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEE--ecccccCCCCc
Confidence 34566766321 122 233 8999999999999999999975 542222110 1122 568876 68998642 4
Q ss_pred eeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Q 018318 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (358)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (358)
.|.++++++ +...........+.+ .++...++..++++.+.+ +...++..++.++|++.|+
T Consensus 306 ~~av~~~~~---------------i~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~ 366 (459)
T PRK06082 306 IAAMITKDK---------------YNTAAQISLGHYTHE-KSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMRERLL 366 (459)
T ss_pred ceEEEEcHH---------------HHhhccCCCCCCCCC-cCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence 566666653 222221110111111 233334444455555532 2456777788888888886
Q ss_pred hC
Q 018318 331 GK 332 (358)
Q Consensus 331 ~~ 332 (358)
+.
T Consensus 367 ~l 368 (459)
T PRK06082 367 EM 368 (459)
T ss_pred HH
Confidence 63
No 353
>PRK07678 aminotransferase; Validated
Probab=98.85 E-value=3.9e-07 Score=88.56 Aligned_cols=252 Identities=14% Similarity=0.034 Sum_probs=126.1
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~---- 119 (358)
+|+|.+|+.+.+.... +....+ ..+...+ ..++|.++++... ...+++||++|+..++.....
T Consensus 65 ~p~v~~ai~~q~~~~~---~~~~~~--~~~~~~~----lae~l~~~~~~~~----~v~f~~sGseA~e~AlklAr~~t~~ 131 (451)
T PRK07678 65 RKELAEAAYEQLKTLS---YFPLTQ--SHEPAIK----LAEKLNEWLGGEY----VIFFSNSGSEANETAFKIARQYHAQ 131 (451)
T ss_pred CHHHHHHHHHHHHhcC---cccccc--CCHHHHH----HHHHHHHhCCCCC----EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 7999999888775321 111111 1222222 3367777775432 235567999999998876521
Q ss_pred ---CC-CeEEEecCCCCccccccccccCCccc-c--c--ccceeEEeecccCCCC-C-----CCC---HHHHHHHHhh--
Q 018318 120 ---PH-DRIMGLDLPSGGHLTHGYYTSGGKKI-S--A--TSIYFESLPYKVNSST-G-----YID---YDKLEEKALD-- 179 (358)
Q Consensus 120 ---~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~-~--~--~g~~~~~~~~~~~~~~-~-----~id---~~~l~~~l~~-- 179 (358)
+| .+|+.....|.|...... ...+... . . ...++..++.+-.... . ..| ++.++++++.
T Consensus 132 ~g~~~r~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (451)
T PRK07678 132 KGEPHRYKFISRYRAYHGNSMGAL-AATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWEL 210 (451)
T ss_pred cCCCCCcEEEEECCCcCCccHHHh-hcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcC
Confidence 23 578777765544321100 0000000 0 0 0001111111100000 0 011 2335666652
Q ss_pred -cCCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc--CCCCC-cccEEEecCCccCCCC
Q 018318 180 -FRPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLRGP 249 (358)
Q Consensus 180 -~~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~~~~-~~d~~~~s~~K~l~g~ 249 (358)
.++.+|+++.. ..|...+ ++++.++|++||+++|+||.|. |+...+.. ...++ ..|++++ .|.|+|.
T Consensus 211 ~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~~~~~~gv~PDivt~--gK~lggG 287 (451)
T PRK07678 211 SETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVIC-GFGRTGKAFGFMNYGVKPDIITM--AKGITSA 287 (451)
T ss_pred CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-cCCcCchhHHHHhcCCCCCEEEe--ecccccC
Confidence 23567777642 2333222 8899999999999999999973 33222211 01123 5788755 7988642
Q ss_pred --CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh------cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 018318 250 --RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKAN 321 (358)
Q Consensus 250 --~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~ 321 (358)
+.|.++++++ +.+.+... ....+.+ .++..+++..++++.+.++ ...++..+.
T Consensus 288 ~~Pi~av~~~~~---------------i~~~~~~~~~~~~~~h~~T~~-gnp~~~aaa~a~l~~l~~~---~~~~~~~~~ 348 (451)
T PRK07678 288 YLPLSATAVKKE---------------IYEAFKGKGEYEHFRHVNTFG-GNPAACALALKNLEIMENE---NLIERSAQL 348 (451)
T ss_pred CcceeEEEEcHH---------------HHHHHhccCcccccccCCCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHH
Confidence 5566777663 44433321 0111111 2333444444556655432 445667777
Q ss_pred HHHHHHHHhh
Q 018318 322 AVALGNYLTG 331 (358)
Q Consensus 322 ~~~l~~~L~~ 331 (358)
.++|++.|++
T Consensus 349 g~~l~~~l~~ 358 (451)
T PRK07678 349 GELLLEQLKE 358 (451)
T ss_pred HHHHHHHHHH
Confidence 7777777754
No 354
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.85 E-value=8.7e-07 Score=78.28 Aligned_cols=210 Identities=17% Similarity=0.141 Sum_probs=117.2
Q ss_pred ceeEeccCCC-CCHHHHHHHhcccccCCCCC-CCC-CCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChH-
Q 018318 33 GIELIASENF-TSFAVIEALGSALTNKYSEG-MPG-NRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP- 108 (358)
Q Consensus 33 ~~~l~a~~~~-~~~~V~~a~~~~~~~~~~~g-~~~-~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~- 108 (358)
+..|..+-|+ .-|++.+.+.....+...++ +.. --.|.|++....|-+.....+.+-+|..-.. -.+..|+|++
T Consensus 31 g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQs 108 (417)
T COG3977 31 GAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQS 108 (417)
T ss_pred CceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCccc
Confidence 3555544443 45666665554433222222 100 0113445545555445567788888876532 2577788886
Q ss_pred HHHHHHHhh---cCCCC--eEEE-ecCCCCccccccccccCCcccccccce-eEEee-cccCCC---CCCCCHHHHHHHH
Q 018318 109 ANFAAYTAV---LEPHD--RIMG-LDLPSGGHLTHGYYTSGGKKISATSIY-FESLP-YKVNSS---TGYIDYDKLEEKA 177 (358)
Q Consensus 109 a~~~~l~a~---~~~gd--~Vl~-~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~-~~~~~~---~~~id~~~l~~~l 177 (358)
+-+.++..+ ...|+ +|+. ..|+|-++-..+ +.+-. +...+ ++..++ .+++|.++|.-.
T Consensus 109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~----------l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~- 177 (417)
T COG3977 109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAG----------LEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG- 177 (417)
T ss_pred hHHHHHHHhcCccCCCcceeEeeccChhhccccccc----------cCccceeeccCCcccccccceeeccCHHHcccc-
Confidence 666665555 23455 3443 456665432111 11100 11111 122211 247888887653
Q ss_pred hhcCCcEEEEcCCCCCC-----ccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC----cccEEEecCCcc-CC
Q 018318 178 LDFRPKLIICGGSAYPR-----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCHIVTTTTHKS-LR 247 (358)
Q Consensus 178 ~~~~~~~v~~~~~~~~~-----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~----~~d~~~~s~~K~-l~ 247 (358)
..+.+|+++-|.||+ ...+.+|.++|++||++++.|.|.+.. +++....+.. .--+.|+|++|. ++
T Consensus 178 --e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~P--FP~iifsd~~~~w~~NiilC~SLSK~GLP 253 (417)
T COG3977 178 --ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVP--FPGIIFSDATPLWNENIILCMSLSKLGLP 253 (417)
T ss_pred --cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCC--CCceecccccccCCCCEEEEeehhhcCCC
Confidence 367888888777663 346889999999999999999985432 2221112221 223788999995 67
Q ss_pred CCCeeEEEEeCC
Q 018318 248 GPRAGMIFYRKG 259 (358)
Q Consensus 248 g~~gG~i~~~~~ 259 (358)
|.|+|+++++.+
T Consensus 254 G~R~GIiIane~ 265 (417)
T COG3977 254 GSRCGIIIANEK 265 (417)
T ss_pred CcceeEEEccHH
Confidence 888999999884
No 355
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.83 E-value=1.3e-07 Score=91.10 Aligned_cols=250 Identities=19% Similarity=0.198 Sum_probs=142.2
Q ss_pred HHHHHHHhcCCCCCCCCccccccCChHHH---HHHHHhhc-CCCC--e--EEEecCCCCccccccccccCCcccccccce
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGSPAN---FAAYTAVL-EPHD--R--IMGLDLPSGGHLTHGYYTSGGKKISATSIY 153 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt~a~---~~~l~a~~-~~gd--~--Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 153 (358)
..++|.++.|.+. ..+.++||.++- ..++.+.+ ..|+ + .+++...||.+++ .+.++|.+
T Consensus 587 Le~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA---------SA~Magmk 653 (1001)
T KOG2040|consen 587 LEKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA---------SAAMAGMK 653 (1001)
T ss_pred HHHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh---------hHHhcCCE
Confidence 3378899999886 357788887543 34455543 3333 3 4566666775542 23566765
Q ss_pred eEEeecccCCCCCCCCHHHHHHHHhhcCC--cEEEEcCCC-CC-CccchHHHHHHHHHhCCEEEEechhhhhhhhccccC
Q 018318 154 FESLPYKVNSSTGYIDYDKLEEKALDFRP--KLIICGGSA-YP-RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (358)
Q Consensus 154 ~~~~~~~~~~~~~~id~~~l~~~l~~~~~--~~v~~~~~~-~~-~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~ 229 (358)
+++++.+ .+|.+|..+|+++.+++.- .++++..|+ +| ....+++++++.|+||--|..|.|.--.-++ +.
T Consensus 654 --vvpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG---lc 727 (1001)
T KOG2040|consen 654 --VVPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG---LC 727 (1001)
T ss_pred --EEEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceec---cc
Confidence 4555555 4799999999999987653 345555544 55 4557999999999999999999985321111 12
Q ss_pred CCCC-cccEEEecCCccCCC------CCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCCh-hHHHHHHH
Q 018318 230 NPFE-YCHIVTTTTHKSLRG------PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHN-HQIGALAV 301 (358)
Q Consensus 230 ~~~~-~~d~~~~s~~K~l~g------~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~al~~ 301 (358)
.|-+ |+|++-..+||+|.- |.+|-|.+++-+...-++-+.+. .. ..-+........+.|.. ..+....-
T Consensus 728 ~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs--~~-~~~~~~~~gsVsaaP~Gsa~ILpISw 804 (1001)
T KOG2040|consen 728 RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS--PG-RPEDTSPVGSVSAAPWGSALILPISW 804 (1001)
T ss_pred CCccccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccC--CC-CCCCCCCccceeccCCCcceeehhHH
Confidence 3334 899999999999843 33355655553221111111111 00 00000000000111111 11211122
Q ss_pred H-HHHhccHHHHHHHHHHHHHHHHHHHHHhhCCceeeeC--CCcceEEEEEcCCC
Q 018318 302 A-LKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG--GTENHLVLWDLRPL 353 (358)
Q Consensus 302 a-l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~--~~~~~~~~v~~~~~ 353 (358)
| ++.+...++.+-.+-..-|+.|..++|+.+-=-++.+ .-..|-..+|+++.
T Consensus 805 aYikmMG~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~f 859 (1001)
T KOG2040|consen 805 AYIKMMGSGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPF 859 (1001)
T ss_pred HHHHHhcccccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhh
Confidence 2 2333334555555566778999999999873223332 24667788999864
No 356
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.82 E-value=3.6e-07 Score=81.63 Aligned_cols=244 Identities=18% Similarity=0.161 Sum_probs=129.9
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc----
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~---- 118 (358)
.+|.+++++.+....-+ ..+..+|. ....+++ +.+.++||.+- .+...+|.+|.+.++....
T Consensus 76 chpki~~aLqeq~~kLt---lssrafYn--d~~~~f~----~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wgy 141 (427)
T KOG1402|consen 76 CHPKIIKALQEQADKLT---LSSRAFYN--DVLGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWGY 141 (427)
T ss_pred CCHHHHHHHHHHHhHhh---hhhHHHhh--hhHHHHH----HHHHHhcCcce-----eeecccchhHHHHHHHHHHHHHH
Confidence 47999999887765221 11111221 2233455 77899999886 3566789999999886542
Q ss_pred --C--CCCe-EEE-ecCCCCccccccccccCCccccccc-----ceeE-EeecccCCCCCCCCHHHHHHHHhhcCCcEEE
Q 018318 119 --E--PHDR-IMG-LDLPSGGHLTHGYYTSGGKKISATS-----IYFE-SLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186 (358)
Q Consensus 119 --~--~gd~-Vl~-~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~-~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~ 186 (358)
+ |.|+ +++ ....+.|-- . ..+.+.+ .++. +.|..++ .-..-|.++|+.++++.+.+.++
T Consensus 142 ~~K~ip~nka~il~~~~nFhGrT-~-------~ais~s~d~ds~~~fgp~~P~~~~-~v~Y~d~eale~~l~~~~vaaFi 212 (427)
T KOG1402|consen 142 RKKNIPKNKAKILSAENNFHGRT-L-------GAISLSTDPDSWDGFGPFLPGVVD-KVPYGDAEALEVALKSPNVAAFI 212 (427)
T ss_pred hhccCCccceeEEEecccccCce-e-------eeEEecCCcchhhccCCCCCCcce-eeccCCHHHHHHHhcCCCeeEEE
Confidence 2 4343 333 222221110 0 0111110 0000 1111010 00135789999999875566666
Q ss_pred EcCC--CCCCcc----chHHHHHHHHHhCCEEEEechhhhhhhhccccC-CCCC--cccEEEecCCccCCCC--CeeEEE
Q 018318 187 CGGS--AYPRDW----DYARFRAVADKCGALLLCDMAHISGLVAAQEAA-NPFE--YCHIVTTTTHKSLRGP--RAGMIF 255 (358)
Q Consensus 187 ~~~~--~~~~~~----~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~-~~~~--~~d~~~~s~~K~l~g~--~gG~i~ 255 (358)
+..- ..|.+. =+++..++|++|++++|.|+.|. |+...|.+. -..+ ..|+++. .|+|.|. +-..++
T Consensus 213 vEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env~PDivil--gKalSGG~~Pvsavl 289 (427)
T KOG1402|consen 213 VEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENVRPDIVIL--GKALSGGVYPVSAVL 289 (427)
T ss_pred eeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhcCCCeEEE--eccccCCeeeeEEEE
Confidence 6532 233322 28899999999999999999985 655544321 1122 5687765 4777542 223444
Q ss_pred EeCCCCCCCCCCCCCccccHHHHhhhhcCCC-CcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+.++ +.-.+....... ..++| ...+...+|++.+.+ +...+|...+-..|+.+|.+.
T Consensus 290 ~~~~---------------im~~~~pgeHgsTyggNp--Lg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l 347 (427)
T KOG1402|consen 290 ADDD---------------IMLNIKPGEHGSTYGGNP--LGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKL 347 (427)
T ss_pred ecHH---------------HHhccCCCccccccCCCh--HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhc
Confidence 4443 222232211111 12222 222333455665543 355667777788888888876
No 357
>PRK05965 hypothetical protein; Provisional
Probab=98.82 E-value=5.2e-07 Score=87.91 Aligned_cols=268 Identities=12% Similarity=0.029 Sum_probs=134.0
Q ss_pred cceeEecc--CCCC---CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENFT---SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~~---~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+.++ ...+ +|+|.+|+.+.+..-. +....+....+...+ ..++|.+++....+ ..++++||
T Consensus 47 ~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~---~~~~~~~~~~~~~~~----lae~L~~~~p~~~~---~v~f~~sG 116 (459)
T PRK05965 47 QLLDAFAGLWCVNVGYGQESIVEAAAEQMRELP---YATGYFHFGSEPAIR----LAAKLAERAPGSLN---HVYFTLGG 116 (459)
T ss_pred EEEECcccHHhccCCCCCHHHHHHHHHHHHhcC---CcccccccCCHHHHH----HHHHHHhhCCCCcC---EEEEeCCh
Confidence 45666554 2222 7999999998875421 111110011222222 33667776632221 23555789
Q ss_pred hHHHHHHHHhhcC-------C-CCeEEEecCCCCcccccc-ccccCCcccc-ccc---ceeEEeecccCCCC-CCCC---
Q 018318 107 SPANFAAYTAVLE-------P-HDRIMGLDLPSGGHLTHG-YYTSGGKKIS-ATS---IYFESLPYKVNSST-GYID--- 169 (358)
Q Consensus 107 t~a~~~~l~a~~~-------~-gd~Vl~~~~~~~~~~~~~-~~~~~~~~~~-~~g---~~~~~~~~~~~~~~-~~id--- 169 (358)
++|+..++..... + ..+|+.....|.|.-... ..+.. .... ..+ .....++.+..... ...|
T Consensus 117 SEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (459)
T PRK05965 117 SDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTAL-PAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQA 195 (459)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCC-chhhcccCCCCCCCEEcCCCcccccccCCChHH
Confidence 9999999876521 2 357888776655542100 00000 0000 001 00111221110000 0123
Q ss_pred -----HHHHHHHHhhc---CCcEEEEcCCC--CCCcc-c---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC
Q 018318 170 -----YDKLEEKALDF---RPKLIICGGSA--YPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE 233 (358)
Q Consensus 170 -----~~~l~~~l~~~---~~~~v~~~~~~--~~~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~ 233 (358)
++++++.++.+ +..+|++.... .|... | +++|.++|++||+++|+||.+. |+...+... ..++
T Consensus 196 ~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~g 274 (459)
T PRK05965 196 IIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT-GFGRTGPLFACEAEG 274 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-cCccCchhhhHhhcC
Confidence 35778888642 34667776422 23222 2 7899999999999999999964 442222111 1122
Q ss_pred -cccEEEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-------cCCCCcCCCChhHHHHHHHHH
Q 018318 234 -YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQIGALAVAL 303 (358)
Q Consensus 234 -~~d~~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~al~~al 303 (358)
..|++++ .|.|+|. +-|.++++++ +.+.+... ....+.+ .++...++..+++
T Consensus 275 v~PDiv~~--gKgl~gG~~Pi~av~~~~~---------------i~~~~~~~~~~~~~~~h~~T~~-gnpl~~Aaa~a~L 336 (459)
T PRK05965 275 VVPDLMTV--AKGLTSGYVPMGAVLMSDH---------------VYQGIADGAGAAAPVGHGYTYS-AHPVSAAVGLEVL 336 (459)
T ss_pred CCCCeEEe--chhhccCCcceeEEEEcHH---------------HHHHHhccccccccccccCCCC-CCHHHHHHHHHHH
Confidence 5688776 6888543 4566667663 33333211 0111111 2333344444455
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 304 KQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+.+.+ +...++..+..++|.+.|++.
T Consensus 337 ~~l~~---~~l~~~~~~~g~~l~~~l~~l 362 (459)
T PRK05965 337 RLYHE---GGLLANGQKAGPRFAAGLDAL 362 (459)
T ss_pred HHHHh---ccHHHHHHHHHHHHHHHHHhh
Confidence 55433 245666777788888888763
No 358
>PRK07482 hypothetical protein; Provisional
Probab=98.81 E-value=6.6e-07 Score=87.22 Aligned_cols=267 Identities=15% Similarity=-0.019 Sum_probs=131.3
Q ss_pred cceeEeccC--CC---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIASE--NF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~~--~~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+.++- .. -+|+|.+|+.+.+.... .......+ ..+...+ ..++|.+++....+ ...+++||
T Consensus 51 ~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~-~~~~~~~~--~~~~~~~----lAe~L~~~~p~~~~---~v~f~~sG 120 (461)
T PRK07482 51 RYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELA-YYHTYVGH--GTEASIT----LSKRIIDRAPAGMS---KVYYGLSG 120 (461)
T ss_pred EEEEcccchhhhcCCCCCHHHHHHHHHHHHhcC-cccccccc--CCHHHHH----HHHHHHHhCCCCcC---EEEEeCch
Confidence 456665542 22 27999999988875421 00111011 1122222 33667776642222 23566899
Q ss_pred hHHHHHHHHhhc------C-C-CCeEEEecCCCCccccccccccCCccc--cccc---ceeEEeecccCCC----C----
Q 018318 107 SPANFAAYTAVL------E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKI--SATS---IYFESLPYKVNSS----T---- 165 (358)
Q Consensus 107 t~a~~~~l~a~~------~-~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~--~~~g---~~~~~~~~~~~~~----~---- 165 (358)
++|+..++.... . + ..+|+.....|.|.- .+.....+... ...+ ..+..++++.... .
T Consensus 121 SEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t-~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 199 (461)
T PRK07482 121 SDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSG-VVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEE 199 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCcc-HhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHH
Confidence 999999987663 1 2 356887776555431 00000000000 0000 0011111110000 0
Q ss_pred --CCCCHHHHHHHHhh---cCCcEEEEcCCC--CCCc-cc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCC
Q 018318 166 --GYIDYDKLEEKALD---FRPKLIICGGSA--YPRD-WD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPF 232 (358)
Q Consensus 166 --~~id~~~l~~~l~~---~~~~~v~~~~~~--~~~~-~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~ 232 (358)
..-+++.+++.+.+ .++.+|++.... .|.. .| +++|.++|++||+++|+||.+. |+...+... ..+
T Consensus 200 ~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~~~~ 278 (461)
T PRK07482 200 QFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVT-GFGRLGSMFGSDHY 278 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCcchhhHHhc
Confidence 01146778888853 235667776422 2322 12 7899999999999999999964 542222110 112
Q ss_pred C-cccEEEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-------cCCCCcCCCChhHHHHHHHH
Q 018318 233 E-YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQIGALAVA 302 (358)
Q Consensus 233 ~-~~d~~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~al~~a 302 (358)
+ ..|++++ .|.|+|. +-|.++++++ +.+.+... ....+. +.++...++..++
T Consensus 279 gv~PDiv~~--gKgl~gG~~Pi~av~~~~~---------------i~~~~~~~~~~~~~~~h~~T~-~gnpl~~Aaa~a~ 340 (461)
T PRK07482 279 GIEPDLITV--AKGLTSAYAPLSGSIVGEK---------------VWDVLEQGSDEHGAIGHGWTY-SGHPICAAAALAN 340 (461)
T ss_pred CCCCCEEEE--ccccccCccccceeeecHH---------------HHHHHhcccccCCccccCCCC-CcCHHHHHHHHHH
Confidence 2 5688875 7988542 4455555553 33333211 011111 1233334444455
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 303 LKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
++.+.++ ...++..+..++|.+.|++
T Consensus 341 L~~~~~~---~l~~~~~~~g~~l~~~L~~ 366 (461)
T PRK07482 341 LDILERE---NLVGNAAEVGAYFRARLRA 366 (461)
T ss_pred HHHHHhC---CHHHHHHHHHHHHHHHHHH
Confidence 5555432 3455666777777777754
No 359
>PRK06917 hypothetical protein; Provisional
Probab=98.81 E-value=5e-07 Score=87.73 Aligned_cols=260 Identities=12% Similarity=0.023 Sum_probs=135.5
Q ss_pred cceeEecc--CC---CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--EN---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.++.+ .. .-+|+|.+|+.+.+... ...+. ..+ ..+... +..++|.+++....+ ..++++||
T Consensus 32 ~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~-~~~~~-~~~--~~~~~~----~lae~L~~~~p~~~~---~v~f~~sG 100 (447)
T PRK06917 32 KYFDGSSGAVTAGIGHGVKEIADAIKEQAEEV-SFVYR-SQF--TSEPAE----KLAKKLSDLSPGDLN---WSFFVNSG 100 (447)
T ss_pred EEEECchhHHhccCCCCCHHHHHHHHHHHhhC-cCccc-ccc--CCHHHH----HHHHHHHHhCCCCCC---EEEEeCCh
Confidence 45666544 22 23899999998887542 11111 111 122222 234677777643221 23566899
Q ss_pred hHHHHHHHHhhc-------CCC-CeEEEecCCCCccccccccccCCcccccccc------------eeEEeecccCC---
Q 018318 107 SPANFAAYTAVL-------EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNS--- 163 (358)
Q Consensus 107 t~a~~~~l~a~~-------~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~--- 163 (358)
++|+..++.... .+| .+|+.....|.|..... +...+. .+..++.+...
T Consensus 101 sEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~a--------ls~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 172 (447)
T PRK06917 101 SEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGA--------LSMSGHPLRRQRFVSLLEDYPTISAPYCYRCP 172 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHH--------HHhcCCccccccCCCCCCCCeEeCCCcccccc
Confidence 999999987652 133 57887776555432110 011110 01111111000
Q ss_pred --CC----CCCCHHHHHHHHhhc---CCcEEEEcCCC--CC-Ccc-c---hHHHHHHHHHhCCEEEEechhhhhhhhccc
Q 018318 164 --ST----GYIDYDKLEEKALDF---RPKLIICGGSA--YP-RDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQE 227 (358)
Q Consensus 164 --~~----~~id~~~l~~~l~~~---~~~~v~~~~~~--~~-~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~ 227 (358)
++ ..-|++.++++++++ +..+|++.... .+ ... | +++|.++|++||+++|+|++|. |+...+.
T Consensus 173 ~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~ 251 (447)
T PRK06917 173 VQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGA 251 (447)
T ss_pred cCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccc
Confidence 00 011346778877643 35677776422 22 222 2 7899999999999999999985 5422222
Q ss_pred cC--CCCC-cccEEEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhc---C-CCCcCCCChhHHHH
Q 018318 228 AA--NPFE-YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV---F-PSLQGGPHNHQIGA 298 (358)
Q Consensus 228 ~~--~~~~-~~d~~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~a 298 (358)
.. ..++ ..|+++ +.|.++|. +.|+++++++ +.+.+.... + ..+. +.++..+++
T Consensus 252 ~~a~~~~gv~PDi~~--~gK~l~~G~~Pi~a~~~~~~---------------i~~~~~~~~~~~~~~~T~-~gnpl~~aa 313 (447)
T PRK06917 252 MFAMEHWGVEPDIMT--LGKGLGAGYTPIAATVVSDR---------------VMEPILRGSRSIMSGHTL-SANPLSAAT 313 (447)
T ss_pred hhhHHhcCCCCCEEE--eeehhccCCcceEEEEEcHH---------------HHHHHhccCcccccccCC-CCCHHHHHH
Confidence 11 1122 568764 48988642 5667777663 444332211 1 1111 123344444
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 299 LAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 299 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
..++++.+.+ +...+++.++.++|++.|++.
T Consensus 314 a~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l 344 (447)
T PRK06917 314 ALAVLEYMEK---HNLPEKAAEKGEYLIKGLQKV 344 (447)
T ss_pred HHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHH
Confidence 4555655532 245667777778888877663
No 360
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.80 E-value=1.5e-06 Score=84.59 Aligned_cols=260 Identities=13% Similarity=0.058 Sum_probs=134.5
Q ss_pred cceeEecc--CCC---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+..+ ... -+|+|.+|+.+.+..- ..... ..+ ..+...+ ..+++.++++.... ...+++||
T Consensus 55 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~-~~~~~-~~~--~~~~~~~----lAe~L~~~~p~~~~---~v~f~~sG 123 (453)
T PRK06943 55 RYLDAISSWWVNLFGHANPRINAALKDQLDTL-EHAML-AGC--THEPAIE----LAERLAALTGGTLG---HAFFASDG 123 (453)
T ss_pred EEEEcchHHHHhcCCCCCHHHHHHHHHHHHhc-CCccc-ccc--CCHHHHH----HHHHHHHhCCCCCC---EEEEeCCC
Confidence 45555543 222 3799999998877532 11111 011 1122222 34677777654321 23556789
Q ss_pred hHHHHHHHHhhc-------CC-CCeEEEecCCCCccccccccccCCcccccccc------------eeEEeecccCCCC-
Q 018318 107 SPANFAAYTAVL-------EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSST- 165 (358)
Q Consensus 107 t~a~~~~l~a~~-------~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~~- 165 (358)
++|+..++.... .+ ..+|+.....|.|.... .+...+. .+..++.+.....
T Consensus 124 seAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~g--------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (453)
T PRK06943 124 ASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIG--------ALGVTDVALFKDAYDPLIRHAHVVASPDARGAR 195 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHH--------hhcccCChhhhcccccCCCCCEEECCCCccccc
Confidence 999999987652 12 35788877665543210 0111110 0111222110000
Q ss_pred -C-------CCCHHHHHHHHhhc--CCcEEEEcCC---CCCCcc-c---hHHHHHHHHHhCCEEEEechhhhhhhhcccc
Q 018318 166 -G-------YIDYDKLEEKALDF--RPKLIICGGS---AYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (358)
Q Consensus 166 -~-------~id~~~l~~~l~~~--~~~~v~~~~~---~~~~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~ 228 (358)
. .-|++++++.++++ +..+|++... +.|... | ++++.++|++||+++|+||.|. |+...+..
T Consensus 196 ~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-G~GRtG~~ 274 (453)
T PRK06943 196 PGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAV-GCGRTGTF 274 (453)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCCCcch
Confidence 0 12357778887642 3566777641 123221 2 7899999999999999999974 44222211
Q ss_pred C--CCCC-cccEEEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh------cCCCCcCCCChhHHH
Q 018318 229 A--NPFE-YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------VFPSLQGGPHNHQIG 297 (358)
Q Consensus 229 ~--~~~~-~~d~~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 297 (358)
. ..++ ..|++++ .|.++|. +.|.++++++ +.+.+... ....+.+ .+...++
T Consensus 275 fa~~~~gv~PDivt~--gKgl~gG~~Pi~av~~~~e---------------i~~~~~~~~~~~~~~~~~T~~-gnpl~~a 336 (453)
T PRK06943 275 FACEQAGVWPDFLCL--SKGISGGYLPLSLVLSRDA---------------IFAAFYDDDVTRGFLHSHSYT-GNPLACR 336 (453)
T ss_pred hHHHhCCCCCCeEee--ehhhccCcccceEEEEcHH---------------HHHhhcccCccCCccCCCCCC-CCHHHHH
Confidence 1 1122 5688876 6887543 4567777663 33333210 0111111 2333444
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 298 ALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 298 al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+..++++.+.+ +...++..+..++|.+.|++.
T Consensus 337 aa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l 368 (453)
T PRK06943 337 AALATLDLFAE---DDVLARNARKSARLRAALAPL 368 (453)
T ss_pred HHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 44455555543 244566677777787777664
No 361
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.78 E-value=4.9e-07 Score=88.11 Aligned_cols=248 Identities=15% Similarity=0.066 Sum_probs=129.7
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc-----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~----- 118 (358)
+|+|.+|+.+.+..-. .+.. ..+ ..+...+ ..++|++++....+ ...+++||++|+..++....
T Consensus 74 ~p~v~~Ai~~ql~~l~-~~~~--~~~-~~~~~~~----lae~L~~~~p~~~~---~v~f~~SGseAve~AlklAr~~~~~ 142 (460)
T PRK06916 74 VPELDEAIREQLNKIA-HSTL--LGL-ANVPSIL----LAEKLIEVVPEGLK---KVFYSDSGATAVEIAIKMAFQYWQN 142 (460)
T ss_pred CHHHHHHHHHHHHhCC-Cccc--ccc-CCHHHHH----HHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 7999999988875421 1111 001 1222222 33677777653222 24667899999999987653
Q ss_pred --CCC-CeEEEecCCCCccccccccccCCcccccccc------------eeEEeecccCCC---CC------CCCHHHHH
Q 018318 119 --EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSS---TG------YIDYDKLE 174 (358)
Q Consensus 119 --~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~---~~------~id~~~l~ 174 (358)
.+| .+|+.....|.|... + .+.+.+. .+..++++.... .. .-+++.++
T Consensus 143 ~g~tgr~~ii~~~~~YHG~t~-~-------als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~ 214 (460)
T PRK06916 143 KGKPKKQRFVTLKNAYHGDTI-G-------AVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELE 214 (460)
T ss_pred cCCCCCcEEEEECCcCCcccH-H-------hHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHH
Confidence 233 578877766554321 0 0111110 011122110000 00 12456677
Q ss_pred HHHhhc--CCcEEEEcC-C--CCCCcc-c---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecC
Q 018318 175 EKALDF--RPKLIICGG-S--AYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTT 242 (358)
Q Consensus 175 ~~l~~~--~~~~v~~~~-~--~~~~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~ 242 (358)
+.++.+ +..+|++.. . ..|... | +++|.++|++||+++|+|++| .|+...+... ..++ ..|+++ +
T Consensus 215 ~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-TG~GRtG~~~a~~~~gv~PDiv~--~ 291 (460)
T PRK06916 215 ELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVA-TGFGRTGKMFACEHENVTPDIMT--A 291 (460)
T ss_pred HHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCcCchhhHHHhcCCCCCeee--e
Confidence 777532 356677764 1 223221 2 789999999999999999997 4542222110 1122 568875 4
Q ss_pred CccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhh-------hcCCCCcCCCChhHHHHHHHHHHHhccHHHHH
Q 018318 243 HKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF-------AVFPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (358)
Q Consensus 243 ~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~ 313 (358)
.|.|+|. +.|.++++++ +.+.+.. .....+.++ ++..+++..++++.+.+ +.
T Consensus 292 gK~l~gG~~Pi~av~~~~e---------------i~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~l~~l~~---~~ 352 (460)
T PRK06916 292 GKGLTGGYLPIAITVTTDE---------------IYNAFYGDYEEQKTFFHGHSYTG-NPLGCAVALANLELYEK---TN 352 (460)
T ss_pred ehhhhcCccccceeeecHH---------------HHHHhhccccccCccccCCCCCC-CHHHHHHHHHHHHHHHh---cc
Confidence 7988532 4566666663 3332221 001112221 33334444455555433 24
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 018318 314 YAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 314 ~~~~~~~~~~~l~~~L~~~ 332 (358)
..++.+++.++|++.|++.
T Consensus 353 l~~~~~~~g~~l~~~l~~l 371 (460)
T PRK06916 353 LIEQVARKTEYVATQLEDL 371 (460)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 5677778888888888763
No 362
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.78 E-value=1.2e-06 Score=85.28 Aligned_cols=201 Identities=14% Similarity=0.051 Sum_probs=101.2
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|.|.+|+.+.+.... +.+...+ ..+...+ ..++|.+++.....+ ...+++||++|+..++.... ...
T Consensus 72 ~p~v~~ai~~q~~~~~---~~~~~~~-~~~~~~~----la~~L~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tgr 141 (451)
T PRK06918 72 HPKVKEALHKQVDQYI---HTGFNVM-MYEPYIE----LAEKLAALAPGSFDK--KVLFLNSGAEAVENAVKIARKYTKR 141 (451)
T ss_pred CHHHHHHHHHHHHhcc---Ccccccc-ccHHHHH----HHHHHHHhCCCCCCC--EEEEcCCcHHHHHHHHHHHHHHhCC
Confidence 7999999988775421 1111001 1122222 346777777533211 24667899999999987652 234
Q ss_pred CeEEEecCCCCccccccccccCCcc--ccc-cc---ceeEEeecccCC--CCCCCC-------HHHHHHHHh----hcCC
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKK--ISA-TS---IYFESLPYKVNS--STGYID-------YDKLEEKAL----DFRP 182 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~--~~~-~g---~~~~~~~~~~~~--~~~~id-------~~~l~~~l~----~~~~ 182 (358)
.+|+.....|.|...... ...+.. ... .+ ..+..++++... ..+..+ ++.+++.+. ..+.
T Consensus 142 ~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (451)
T PRK06918 142 QGIISFSRGFHGRTLMTM-TMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETI 220 (451)
T ss_pred CcEEEECCCcCccchhhh-hhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCce
Confidence 467777765554321110 000000 000 00 001111221000 001000 223444442 1235
Q ss_pred cEEEEcCC--CCCCc---cc-hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC---C-cccEEEecCCccCC-CCCe
Q 018318 183 KLIICGGS--AYPRD---WD-YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YCHIVTTTTHKSLR-GPRA 251 (358)
Q Consensus 183 ~~v~~~~~--~~~~~---~~-l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~---~-~~d~~~~s~~K~l~-g~~g 251 (358)
.+|++... +.|.. .+ +++|.++|++||+++|+|+.+ .|+...+.. ..+ + ..|++ +++|.++ |.+.
T Consensus 221 Aavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~-tg~gr~g~~-~a~~~~~v~pDi~--t~sK~l~~G~pi 296 (451)
T PRK06918 221 AAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ-TGFARTGKY-FAIEHFDVVPDLI--TVSKSLGAGVPI 296 (451)
T ss_pred EEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCcCccCce-ehhHhcCCCCCEE--eeehhhcCCCcc
Confidence 56666532 12221 22 889999999999999999995 355333321 122 2 35744 6899884 5667
Q ss_pred eEEEEeCC
Q 018318 252 GMIFYRKG 259 (358)
Q Consensus 252 G~i~~~~~ 259 (358)
|+++++++
T Consensus 297 g~v~~~~~ 304 (451)
T PRK06918 297 SGVIGRKE 304 (451)
T ss_pred EEEEEcHH
Confidence 88888763
No 363
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.76 E-value=6.2e-07 Score=83.97 Aligned_cols=246 Identities=15% Similarity=0.061 Sum_probs=123.1
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc-----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~----- 118 (358)
+|.+.+++.+.+.... ..... .+ ..+...++ .++|.+.++-..+ ...+++||++|+..++....
T Consensus 34 ~p~i~~ai~~~~~~~~-~~~~~-~~--~~~~~~~l----a~~L~~~~p~~~~---~v~f~~sGseAve~Alkla~~~~~~ 102 (339)
T PF00202_consen 34 HPEIAEAIAEQANKLN-YVSFS-GF--THPEAAEL----AEKLAELFPGGLD---RVFFANSGSEAVEAALKLARQYHNK 102 (339)
T ss_dssp -HHHHHHHHHHHHHCS-SCSTT-TS--EEHHHHHH----HHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHhhhcc-ccccc-ce--eccchhhh----hhhhhhccccccc---eeeeccCchHHHHHHHHHhhccccc
Confidence 7899999887765421 11111 11 12333333 3778888832222 23556889999999987665
Q ss_pred -C--CCCeEEEecCCCCcccccccc-ccCCcccc-ccc---ceeEEeecccCCCCCCCCHHH----------HHHHHh--
Q 018318 119 -E--PHDRIMGLDLPSGGHLTHGYY-TSGGKKIS-ATS---IYFESLPYKVNSSTGYIDYDK----------LEEKAL-- 178 (358)
Q Consensus 119 -~--~gd~Vl~~~~~~~~~~~~~~~-~~~~~~~~-~~g---~~~~~~~~~~~~~~~~id~~~----------l~~~l~-- 178 (358)
. ...+|+.....|.|....... +.. ...+ ..+ ..+..+++ .|+.. +++.+.
T Consensus 103 ~~~~~r~~il~~~~~yHG~t~~~~s~~~~-~~~~~~~~~~~~~~~~~p~--------~~~~~~~~~~~~~~~~~~~~~~~ 173 (339)
T PF00202_consen 103 RAYTGRRKILAFEGSYHGRTLGALSLTGN-PPYRKGFGPLYPGVVFVPF--------PDPAADEEEQACLNALEELIAAL 173 (339)
T ss_dssp THHHTTTEEEEETTTB-TSSHHHHHHSSS-THHHTTTCSSSTTEEEEET--------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCceEEEeeeeeeccCcccccccCC-ccccccccccccccccccC--------CccchhhhHHHHHHHHHHHHHhh
Confidence 1 345888887666543210000 000 0000 000 01112222 22222 333332
Q ss_pred -hcCCcEEEEcCC--CCCCcc----chHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCC-
Q 018318 179 -DFRPKLIICGGS--AYPRDW----DYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR- 247 (358)
Q Consensus 179 -~~~~~~v~~~~~--~~~~~~----~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~- 247 (358)
..+..+|+++.. ..+... =+++|.++|++||+++|+||.|. |+...+... .... ..|+++++ |.++
T Consensus 174 ~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-G~gRtG~~~a~~~~gv~PDiv~~g--K~l~g 250 (339)
T PF00202_consen 174 NADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQT-GFGRTGKFFASEHYGVDPDIVTFG--KGLGG 250 (339)
T ss_dssp HGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTT-TTTTTSSSSGHHHHTSSSSEEEEE--GGGGT
T ss_pred cCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccc-cccccCCccceecccccCcccccc--cchhh
Confidence 223456777642 223221 17899999999999999999974 543222211 0012 56998886 9884
Q ss_pred CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 018318 248 GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (358)
Q Consensus 248 g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~ 327 (358)
|.+.|.++++++ +.+.+.......+.+ .++..+++..+.++.+.. +...++..+..++|++
T Consensus 251 G~p~sav~~~~~---------------i~~~~~~~~~~~T~~-g~p~~~aaa~~~l~~~~~---~~~~~~~~~~g~~l~~ 311 (339)
T PF00202_consen 251 GLPISAVLGSEE---------------IMEAFQPGSHGSTFG-GNPLSCAAALATLEILEE---EDLLERVRELGERLRE 311 (339)
T ss_dssp TSSEEEEEEEHH---------------HHTTSCTTSSTCTTT-T-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred hhhcccccccch---------------hhccccccccccccc-cchHhhhhhhhHHHhhcc---HHHHHHHHHHHHHHHH
Confidence 456678888773 444332221111111 122333333444555432 2345566666777777
Q ss_pred HHhh
Q 018318 328 YLTG 331 (358)
Q Consensus 328 ~L~~ 331 (358)
.|++
T Consensus 312 ~L~~ 315 (339)
T PF00202_consen 312 GLRE 315 (339)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6664
No 364
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.76 E-value=1.2e-06 Score=85.30 Aligned_cols=253 Identities=13% Similarity=0.050 Sum_probs=127.5
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|+|.+|+.+.+.... +....+. ..+...+ ..++|.+++....+ ...+++||++|+..++.... ...
T Consensus 71 ~p~i~~Ai~~ql~~~~---~~~~~~~-~~~~~~~----lae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tgr 139 (457)
T PRK05639 71 HPKLVKAVQEQVALIQ---HSMIGYT-HSERAIR----VAEKLAEISPIENP---KVLFGLSGSDAVDMAIKVSKFSTRR 139 (457)
T ss_pred CHHHHHHHHHHHHhcc---ccccCcc-CCHHHHH----HHHHHHhhCCCCcC---EEEEeCchHHHHHHHHHHHHHhcCC
Confidence 7999999988875321 1111111 1122222 33667777654322 23567889999999987662 234
Q ss_pred CeEEEecCCCCccccccc-ccc----CCccc-ccccceeEEeecccCCC-----CCCCCH--------HHHHHHHh----
Q 018318 122 DRIMGLDLPSGGHLTHGY-YTS----GGKKI-SATSIYFESLPYKVNSS-----TGYIDY--------DKLEEKAL---- 178 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~-~~~----~~~~~-~~~g~~~~~~~~~~~~~-----~~~id~--------~~l~~~l~---- 178 (358)
.+|+.....|.|...... .+. ..... ... .++..++++.... +..-|+ +.+++++.
T Consensus 140 ~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 218 (457)
T PRK05639 140 PWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM-PNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVV 218 (457)
T ss_pred CeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC-CCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 567777655544321000 000 00000 000 0112222211000 000122 23455442
Q ss_pred -hcCCcEEEEcCC--CCCCcc-c---hHHHHHHHHHhCCEEEEechhhhhhhhcccc--CCCCC-cccEEEecCCccCC-
Q 018318 179 -DFRPKLIICGGS--AYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLR- 247 (358)
Q Consensus 179 -~~~~~~v~~~~~--~~~~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~--~~~~~-~~d~~~~s~~K~l~- 247 (358)
..+..+|++... ..+... | +++|.++|++||+++|+|++|. |+...+.. ...++ ..|+++ +.|.++
T Consensus 219 ~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~--~gK~l~g 295 (457)
T PRK05639 219 PPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLII--FGKGVAS 295 (457)
T ss_pred CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEE--echhhcC
Confidence 124567777632 223222 2 7899999999999999999986 64322321 01123 578887 689986
Q ss_pred CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 018318 248 GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (358)
Q Consensus 248 g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~ 327 (358)
|.+.|+++++++ +.+..... ...+.+ .++...++..++++.+.. +...++..++.++|++
T Consensus 296 G~pi~av~~~~~---------------i~~~~~~~-~~~T~~-g~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~ 355 (457)
T PRK05639 296 GMGLSGVIGRKE---------------LMDLTSGS-ALLTPA-ANPVISAAAEATLEIIEE---ENLLKNALKVGEFIKK 355 (457)
T ss_pred CCcceeEEehHH---------------HHhhcCCC-cccCCC-cCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHH
Confidence 434477777764 33321111 111112 233334444455655543 2445667777888888
Q ss_pred HHhh
Q 018318 328 YLTG 331 (358)
Q Consensus 328 ~L~~ 331 (358)
.|++
T Consensus 356 ~L~~ 359 (457)
T PRK05639 356 RLLE 359 (457)
T ss_pred HHHH
Confidence 8876
No 365
>PRK07483 hypothetical protein; Provisional
Probab=98.75 E-value=9.8e-07 Score=85.59 Aligned_cols=266 Identities=16% Similarity=0.101 Sum_probs=131.8
Q ss_pred cceeEecc--CCC---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+.+.+..+ ... -+|.|.+++.+.+.... +.....+ ..+...++ .++|.+++.-..+ ...+++||
T Consensus 31 ~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~---~~~~~~~-~~~~~~~l----ae~L~~~~p~~~~---~v~f~~sG 99 (443)
T PRK07483 31 RYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLA---YAHTSFF-TTEPAEAL----ADRLVAAAPAGLE---HVYFVSGG 99 (443)
T ss_pred EEEEcCccHhhhccCCCCHHHHHHHHHHHHhcc---Ccccccc-CCHHHHHH----HHHHHHhCCCCCC---EEEEcCCc
Confidence 45666543 222 37999999988875421 1110111 12323233 3667776642212 23567889
Q ss_pred hHHHHHHHHhhcC-------CC-CeEEEecCCCCccccccccccCCcc-cc-ccc---ceeEEeecccCCCCC--CC---
Q 018318 107 SPANFAAYTAVLE-------PH-DRIMGLDLPSGGHLTHGYYTSGGKK-IS-ATS---IYFESLPYKVNSSTG--YI--- 168 (358)
Q Consensus 107 t~a~~~~l~a~~~-------~g-d~Vl~~~~~~~~~~~~~~~~~~~~~-~~-~~g---~~~~~~~~~~~~~~~--~i--- 168 (358)
++|+..++..... +| .+|+.....|.|...... ...+.. .. ..+ ..+..++.+....+. ..
T Consensus 100 sEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~-s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK07483 100 SEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGAL-AIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDE 178 (443)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHh-hhcCCcccccccCCCCCCCEEeCCCccccccccCCCHH
Confidence 9999999875521 33 468877766554321000 000000 00 000 001111111000000 00
Q ss_pred -----CHHHHHHHHhh---cCCcEEEEcCCC---CCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CC
Q 018318 169 -----DYDKLEEKALD---FRPKLIICGGSA---YPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NP 231 (358)
Q Consensus 169 -----d~~~l~~~l~~---~~~~~v~~~~~~---~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~ 231 (358)
.++++++++.+ .++.+|++.... .+...+ ++.|.++|++||+++|+||.|. |+...+... ..
T Consensus 179 ~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~ 257 (443)
T PRK07483 179 AYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEE 257 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhh
Confidence 13567766642 234577776432 132222 8899999999999999999975 442222111 11
Q ss_pred CC-cccEEEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhc----CCCCcCCCChhHHHHHHHHHH
Q 018318 232 FE-YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV----FPSLQGGPHNHQIGALAVALK 304 (358)
Q Consensus 232 ~~-~~d~~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~al~~al~ 304 (358)
++ ..|++++ .|.++|. +.|.++++++ +.+.+.... ...+.+ .++...++..+.++
T Consensus 258 ~gv~PDiv~~--gK~l~gG~~Pi~av~~~~~---------------i~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~l~ 319 (443)
T PRK07483 258 DGVAPDLVTI--AKGLGAGYQPIGAVLASDR---------------IYDAIADGSGFFQHGHTYL-GHATACAAALAVQR 319 (443)
T ss_pred cCCCCCeeee--hhhhccCccccEEEEEcHH---------------HHHHHhcCCCccccCCCCC-CCHHHHHHHHHHHH
Confidence 22 5687776 7888543 4566667663 434333211 111111 23333444445555
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 305 QASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
.+.+ +...++..+..++|++.|++
T Consensus 320 ~i~~---~~l~~~~~~~g~~l~~~L~~ 343 (443)
T PRK07483 320 VIAE---DGLLANVRARGEQLRARLRE 343 (443)
T ss_pred HHHh---cCHHHHHHHHHHHHHHHHHH
Confidence 5433 24566677777777777764
No 366
>PRK07481 hypothetical protein; Provisional
Probab=98.75 E-value=2.4e-06 Score=83.02 Aligned_cols=269 Identities=13% Similarity=0.010 Sum_probs=130.3
Q ss_pred cceeEecc--CCC---CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--ENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~~---~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+.++ ... -+|+|.+|+.+.+.... +.........+...+ ..++|.++++-..-+ ...+++||
T Consensus 43 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~---~~~~~~~~~~~~~~~----lae~L~~~~~~~~~~--~v~f~~sG 113 (449)
T PRK07481 43 KLLDGVGGLWNVNVGHNREEVKEAIVRQLDELE---YYSTFDGTTHPRAIE----LSYELIDMFAPEGMR--RVFFSSGG 113 (449)
T ss_pred EEEECchhHHhhcCCCCCHHHHHHHHHHHHhcc---ceecccccCCHHHHH----HHHHHHHhcCCCCCC--EEEEcCch
Confidence 45666543 222 27999999988775321 110000001122222 336777776311101 23556789
Q ss_pred hHHHHHHHHhhcC-------CC-CeEEEecCCCCccccccccccCCcc-cc--c--ccceeEEeecccCCC-CCC-CCHH
Q 018318 107 SPANFAAYTAVLE-------PH-DRIMGLDLPSGGHLTHGYYTSGGKK-IS--A--TSIYFESLPYKVNSS-TGY-IDYD 171 (358)
Q Consensus 107 t~a~~~~l~a~~~-------~g-d~Vl~~~~~~~~~~~~~~~~~~~~~-~~--~--~g~~~~~~~~~~~~~-~~~-id~~ 171 (358)
++|+..++..... +| .+|+.....|.|...... ...+.. .+ . ...++..++.+.... .+. .|++
T Consensus 114 sEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~-s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 192 (449)
T PRK07481 114 SDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGA-SVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPE 192 (449)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhh-ccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHH
Confidence 9999999876531 23 478877766554321000 000000 00 0 000111111110000 001 1444
Q ss_pred H--------HHHHHhh---cCCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCC
Q 018318 172 K--------LEEKALD---FRPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPF 232 (358)
Q Consensus 172 ~--------l~~~l~~---~~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~ 232 (358)
. +++++.. .++.+|++... +.|...+ +++|.++|++||+++|.||.|. |+...+... ..+
T Consensus 193 ~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~ 271 (449)
T PRK07481 193 ELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVT-GFGRTGSWFGSRGW 271 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCcCchhhHhhhc
Confidence 4 3444431 23567777642 2233222 8899999999999999999974 542222110 112
Q ss_pred C-cccEEEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-------cCCCCcCCCChhHHHHHHHH
Q 018318 233 E-YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQIGALAVA 302 (358)
Q Consensus 233 ~-~~d~~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~al~~a 302 (358)
+ ..|+++. .|.++|. +.|.++++++ +.+.+... ....+.+ .++..+++..++
T Consensus 272 gv~PDiv~~--gKgl~gG~~Pi~av~~~~~---------------i~~~~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~ 333 (449)
T PRK07481 272 GVKPDIMCL--AKGITSGYVPLGATMVNAR---------------IADAFEANADFGGAIMHGYTYS-GHPVACAAALAT 333 (449)
T ss_pred CCCCCEEEE--eecccCCCcCceEEEEcHH---------------HHHHHhccCccccccccCCCCC-CCHHHHHHHHHH
Confidence 2 5688766 7888642 4566667663 43333221 0111111 133334444455
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 303 LKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++.+.+ +...++..+..++|++.|++.
T Consensus 334 L~~l~~---~~l~~~~~~~g~~l~~~L~~l 360 (449)
T PRK07481 334 LDIVVR---EDLPANAAKRGAYLLEGLQPL 360 (449)
T ss_pred HHHHHh---hhHHHHHHHHHHHHHHHHHHH
Confidence 555533 244566777777777777653
No 367
>PRK07036 hypothetical protein; Provisional
Probab=98.74 E-value=1.8e-06 Score=84.23 Aligned_cols=255 Identities=16% Similarity=0.059 Sum_probs=125.4
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc-----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~----- 118 (358)
+|+|.+|+.+.+.. ....... .. ...+...+ ..++|.+++....+ ...+++||++|+..++....
T Consensus 69 ~p~v~~Ai~~q~~~-~~~~~~~-~~-~~~~~~~~----lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~~ 138 (466)
T PRK07036 69 REEMADAIADQARR-LPYYTPF-GD-MTNAPAAE----LAAKLAELAPGDLN---HVFLTTGGSTAVDSALRFVHYYFNV 138 (466)
T ss_pred CHHHHHHHHHHHHh-Ccccccc-cc-cCCHHHHH----HHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHHh
Confidence 79999999887753 2111110 00 11222222 33667776543221 23556789999999887642
Q ss_pred -C-C-CCeEEEecCCCCccccccccccCCcccccc-----cceeEEeecccCCC-CCCC--------CHHHHHHHHhh--
Q 018318 119 -E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKISAT-----SIYFESLPYKVNSS-TGYI--------DYDKLEEKALD-- 179 (358)
Q Consensus 119 -~-~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~-~~~i--------d~~~l~~~l~~-- 179 (358)
. + ..+|+.....|.|...... ...+...... ...+..++.+.... .... ..+.+++.+..
T Consensus 139 ~g~t~r~~Ii~~~~~YHG~t~~a~-s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 217 (466)
T PRK07036 139 RGRPAKKHIITRGDAYHGSTYLTA-SLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLG 217 (466)
T ss_pred cCCCCccEEEEEcCccCCccHhhh-cccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcC
Confidence 1 2 2578877765544321000 0000000000 00011111110000 0011 13445666643
Q ss_pred -cCCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhcccc-C-C-CCC-cccEEEecCCccCCC
Q 018318 180 -FRPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-N-PFE-YCHIVTTTTHKSLRG 248 (358)
Q Consensus 180 -~~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~-~-~-~~~-~~d~~~~s~~K~l~g 248 (358)
.++.+|++... +.|...+ +++|.++|++||+++|+||.|. |+...+.. . . .++ ..|++++ .|.++|
T Consensus 218 ~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~~~~~~~gv~PDivt~--gK~l~g 294 (466)
T PRK07036 218 ADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVT-GFGRLGHFFASEAVFGIQPDIITF--AKGLTS 294 (466)
T ss_pred CCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCcCchhhhhhhhcCCCCCEEEE--cccccc
Confidence 23567777643 2333333 8899999999999999999973 33222211 0 1 123 5687654 798865
Q ss_pred C--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-------cCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHH
Q 018318 249 P--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVK 319 (358)
Q Consensus 249 ~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~ 319 (358)
. +.|.++++++ +.+.+... ....+.+ .++..+++..++++.+.+ +...++..
T Consensus 295 G~~Pi~av~~~~~---------------i~~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~Le~i~~---~~l~~~~~ 355 (466)
T PRK07036 295 GYQPLGAVIISER---------------LLDVISGPNAKGNVFTHGFTYS-GHPVACAAALKNIEIMER---EGLCEHVR 355 (466)
T ss_pred CccccEEEEEcHH---------------HHHHHhcccCcCcccccCCCCC-CCHHHHHHHHHHHHHHHh---CCHHHHHH
Confidence 2 4566667663 44433211 0111111 233444444455555432 24566777
Q ss_pred HHHHHHHHHHhh
Q 018318 320 ANAVALGNYLTG 331 (358)
Q Consensus 320 ~~~~~l~~~L~~ 331 (358)
+..++|++.|+.
T Consensus 356 ~~g~~l~~~L~~ 367 (466)
T PRK07036 356 EVGPYFEERLAS 367 (466)
T ss_pred HHHHHHHHHHHH
Confidence 778888888765
No 368
>PRK06148 hypothetical protein; Provisional
Probab=98.74 E-value=1.6e-06 Score=92.01 Aligned_cols=253 Identities=16% Similarity=0.085 Sum_probs=127.3
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhc--CCC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPH 121 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~--~~g 121 (358)
+|+|.+|+.+.+..- . .+ ..+. .+...+ ..++|.+++....+ ...+++||++|+..++.... ...
T Consensus 640 hp~v~~Ai~~q~~~l-~-~~--~~~~--~~~~~~----lAe~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tGr 706 (1013)
T PRK06148 640 HPRVVAAAARQAARL-N-TN--TRYL--HDAIVA----YAERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTGQ 706 (1013)
T ss_pred CHHHHHHHHHHHhhc-C-Cc--CCcC--CHHHHH----HHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcCC
Confidence 799999998877532 1 11 1221 122222 34677777643222 23567899999999987663 234
Q ss_pred CeEEEecCCCCccccccccccCCccccc-cc----ceeEEeecccCCC-CCC-CC-------HHHHHHHHhh-----cCC
Q 018318 122 DRIMGLDLPSGGHLTHGYYTSGGKKISA-TS----IYFESLPYKVNSS-TGY-ID-------YDKLEEKALD-----FRP 182 (358)
Q Consensus 122 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~-~g----~~~~~~~~~~~~~-~~~-id-------~~~l~~~l~~-----~~~ 182 (358)
.+|++....|.|..... ....+..... .+ ..+...+.+.... .+. .| .+.++++++. ..+
T Consensus 707 ~~ii~~~~~YHG~t~~a-~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~i 785 (1013)
T PRK06148 707 RDAIVLDHAYHGTTTEL-IDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGP 785 (1013)
T ss_pred CeEEEEcCCccCCCcch-hhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCce
Confidence 57887776554432100 0000000000 00 0011111110000 000 11 2446665542 235
Q ss_pred cEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccc--cC-CCCC-cccEEEecCCccCC-CCCe
Q 018318 183 KLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQE--AA-NPFE-YCHIVTTTTHKSLR-GPRA 251 (358)
Q Consensus 183 ~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~--~~-~~~~-~~d~~~~s~~K~l~-g~~g 251 (358)
.+|++... +.|.+.+ ++++.++|++||+++|+||+|. |+...+. .. ...+ ..|++++ .|.|+ |.+.
T Consensus 786 AAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqt-GfGRtG~~~~a~e~~gv~PDivt~--gK~lggG~Pl 862 (1013)
T PRK06148 786 AFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQV-GFGRVGSHWWAFETQGVVPDIVTM--GKPIGNGHPM 862 (1013)
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEeccc-CCCCCCCcchhhhhcCCCcceeee--cccccCCcce
Confidence 66776632 2333333 8899999999999999999974 3322221 00 1112 5688665 79885 4455
Q ss_pred eEEEEeCCCCCCCCCCCCCccccHHHHhhhhc-CCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Q 018318 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (358)
Q Consensus 252 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (358)
|.+++++ ++.+.+.... +..+.+ .++...++..++++.+.++ ...++..+..++|++.|+
T Consensus 863 gav~~~~---------------ei~~~~~~g~~~~~Tf~-gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~ 923 (1013)
T PRK06148 863 GAVVTTR---------------EIADSFDNGMEYFNTFG-GNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLR 923 (1013)
T ss_pred EEEEEcH---------------HHHhhccCCCccccCCC-CCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHH
Confidence 7777766 3444433211 112222 2333344444556555432 445667777778877776
Q ss_pred hC
Q 018318 331 GK 332 (358)
Q Consensus 331 ~~ 332 (358)
+.
T Consensus 924 ~l 925 (1013)
T PRK06148 924 EL 925 (1013)
T ss_pred HH
Confidence 53
No 369
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.73 E-value=1.2e-06 Score=80.04 Aligned_cols=196 Identities=15% Similarity=0.139 Sum_probs=117.7
Q ss_pred CCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhc-CC
Q 018318 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVL-EP 120 (358)
Q Consensus 43 ~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~-~~ 120 (358)
.|..+++.....+.... |..|. |..+..+.-+.+.+.+.+.+.=| .+.++ -.|+.|+|. .|+..++..++ .+
T Consensus 87 fp~Dai~RA~~~L~~~g--Gs~Ga--YS~SqGv~~vR~~VA~~I~rRDG-~p~~p-~dI~LT~GAS~ai~~il~l~~~~~ 160 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCG--GSLGA--YSDSQGVPGVRKHVAEFIERRDG-IPADP-EDIFLTTGASPAIRSILSLLIAGK 160 (475)
T ss_pred CCHHHHHHHHHHHHhcC--Ccccc--cccccCChhHHHHHHHHHHhccC-CCCCH-HHeeecCCCcHHHHHHHHHHhcCC
Confidence 45566665555565443 22221 22333344444555566666667 33233 246667775 58888888774 57
Q ss_pred CCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCC-CCCCCHHHHHHHHhhc----CCcEEEEcCCCCCC-
Q 018318 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDF----RPKLIICGGSAYPR- 194 (358)
Q Consensus 121 gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~id~~~l~~~l~~~----~~~~v~~~~~~~~~- 194 (358)
.+-|+++.|.|+=+ + ..+...|.. .+++-+|++ +|.+|.++|++.+++. +|+++++-+|.||+
T Consensus 161 ~~GvliPiPQYPLY------s---Ati~l~~~~--~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTG 229 (475)
T KOG0258|consen 161 KTGVLIPIPQYPLY------S---ATISLLGGT--QVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTG 229 (475)
T ss_pred CCceEeecCCCchh------H---HHHHHhCCc--ccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccc
Confidence 88899999887622 1 234455543 344333433 6899999999887653 46766655566662
Q ss_pred ----ccchHHHHHHHHHhCCEEEEechhhhhhhhccc-cCCCC-------C--cc---c-EEEecCCccC---CCCCeeE
Q 018318 195 ----DWDYARFRAVADKCGALLLCDMAHISGLVAAQE-AANPF-------E--YC---H-IVTTTTHKSL---RGPRAGM 253 (358)
Q Consensus 195 ----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~-~~~~~-------~--~~---d-~~~~s~~K~l---~g~~gG~ 253 (358)
...+++|..+|+++++.++.|+. +-.-++.+. ....+ . +. - +.+.|.||.. .|.+||+
T Consensus 230 qvls~e~ie~i~~fa~~~~l~llaDEV-YQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGY 308 (475)
T KOG0258|consen 230 QVLSEENIEGIICFAAEEGLVLLADEV-YQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGY 308 (475)
T ss_pred hhhcHHHHHHHHHHHHHcCeEEechHH-HHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCe
Confidence 34699999999999999999998 333333321 00111 1 22 2 3455778875 3678888
Q ss_pred EEE
Q 018318 254 IFY 256 (358)
Q Consensus 254 i~~ 256 (358)
+=.
T Consensus 309 mEv 311 (475)
T KOG0258|consen 309 MES 311 (475)
T ss_pred eec
Confidence 654
No 370
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.70 E-value=2.5e-06 Score=83.24 Aligned_cols=267 Identities=12% Similarity=0.085 Sum_probs=133.7
Q ss_pred cceeEecc--CC---CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCC
Q 018318 32 RGIELIAS--EN---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (358)
Q Consensus 32 ~~~~l~a~--~~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sG 106 (358)
+++.+.++ .. .-+|+|.+|+.+.+..- ..... ..+. .+...++ .+++.+++....+ ...+++||
T Consensus 48 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l-~~~~~-~~~~--~~~~~~l----ae~L~~~~p~~~~---~v~f~~sG 116 (466)
T PRK07030 48 RYLDAVSSWWVNVFGHANPRINQRIKDQVDQL-EHVIL-AGFS--HEPVIEL----SERLVKITPPGLS---RCFYADNG 116 (466)
T ss_pred EEEEcchhHHhhcCCCCCHHHHHHHHHHHHhc-CCccc-cccC--CHHHHHH----HHHHHHhCCCCcC---EEEEeCCc
Confidence 45555544 22 23799999998877532 11111 0111 1222223 3667776642222 23556889
Q ss_pred hHHHHHHHHhhc-------CC-CCeEEEecCCCCccccccccccCCcccccc--c---ceeEEeecccCC--CCC-----
Q 018318 107 SPANFAAYTAVL-------EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISAT--S---IYFESLPYKVNS--STG----- 166 (358)
Q Consensus 107 t~a~~~~l~a~~-------~~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~--g---~~~~~~~~~~~~--~~~----- 166 (358)
++|+..++.... ++ ..+|+.....|.|...... ...+...... + ..+..++.+... ..+
T Consensus 117 sEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~-s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~ 195 (466)
T PRK07030 117 SSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAM-SVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEE 195 (466)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHH-hccCCccccccCCccCCCCEEcCCCCccccccCCCHHH
Confidence 999999987652 12 3468777765544311000 0000000000 0 001112211000 000
Q ss_pred --CCCHHHHHHHHhhc--CCcEEEEcC-C--CCCCcc-c---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC
Q 018318 167 --YIDYDKLEEKALDF--RPKLIICGG-S--AYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE 233 (358)
Q Consensus 167 --~id~~~l~~~l~~~--~~~~v~~~~-~--~~~~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~ 233 (358)
.-+++.+++.++++ +..+|++.. . ..+... | +++|.++|++||+++|+||.|. |+...+... ..++
T Consensus 196 ~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~T-GfGRtG~~~a~~~~g 274 (466)
T PRK07030 196 HSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAV-GFGRTGTMFACEQAG 274 (466)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCccccchHHHhcC
Confidence 11356678877632 356677764 1 223222 2 7899999999999999999964 442222110 1122
Q ss_pred -cccEEEecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-------cCCCCcCCCChhHHHHHHHHH
Q 018318 234 -YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQIGALAVAL 303 (358)
Q Consensus 234 -~~d~~~~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~al~~al 303 (358)
..|++++ .|.|+|. +.|.++++++ +.+.+... ....+.+ .++..+++..+++
T Consensus 275 v~PDiv~~--gKgl~gG~~Pi~av~~~~e---------------i~~~~~~~~~~~~~~~h~~T~~-gnpla~aaa~a~L 336 (466)
T PRK07030 275 IRPDFLCL--SKALTGGYLPLAAVLTTDT---------------VYQAFYDDYPTLRAFLHSHSYT-GNPLACAAALATL 336 (466)
T ss_pred CCCCEEee--ehhccCCcccceEEEecHH---------------HHHHHhcccccccccccCCCCC-CCHHHHHHHHHHH
Confidence 5688876 6888543 5667777663 43333210 1111111 2333444444556
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 304 KQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
+.+.+ +...++..+..++|++.|++.
T Consensus 337 ~~i~~---~~l~~~~~~~G~~l~~~L~~l 362 (466)
T PRK07030 337 DIFEQ---DNVIENNRALARRMAEATAHL 362 (466)
T ss_pred HHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 55543 245667777778888877654
No 371
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.68 E-value=2.9e-06 Score=82.75 Aligned_cols=256 Identities=15% Similarity=0.080 Sum_probs=124.4
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccc-cCChHHHHHHHHhhc--CC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQP-YSGSPANFAAYTAVL--EP 120 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~-~sGt~a~~~~l~a~~--~~ 120 (358)
+|.|.+|+.+.+..... +.... + ..+...++ .+++.+++..........+++ +||++|+..++.... ..
T Consensus 81 ~p~v~~Ai~~ql~~~~~--~~~~~-~-~~~~~~~l----a~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tg 152 (464)
T PRK06938 81 HPVVIEAIQQVLADELP--LHTLD-L-TTPVKDQF----VQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATG 152 (464)
T ss_pred CHHHHHHHHHHHHhhhc--ccccc-c-CCHHHHHH----HHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhC
Confidence 79999999887753221 11111 1 12222223 245555543211000012344 599999999987652 23
Q ss_pred CCeEEEecCCCCccccccccccCCcc-c--cccc--ceeEEeecccCCCC---------CCCCHHHHHHHHhhc-----C
Q 018318 121 HDRIMGLDLPSGGHLTHGYYTSGGKK-I--SATS--IYFESLPYKVNSST---------GYIDYDKLEEKALDF-----R 181 (358)
Q Consensus 121 gd~Vl~~~~~~~~~~~~~~~~~~~~~-~--~~~g--~~~~~~~~~~~~~~---------~~id~~~l~~~l~~~-----~ 181 (358)
..+|+.....|.|...... ...+.. . ...+ .++..++++..... ...+++.+++.+++. +
T Consensus 153 r~~ii~~~~~yHG~t~~al-s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 231 (464)
T PRK06938 153 RSTVLSFQGGYHGMSQGAL-SLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVL 231 (464)
T ss_pred CCeEEEECCccCCccHHHH-hhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCc
Confidence 4577777755544321000 000000 0 0000 01122222211000 012367788888642 3
Q ss_pred CcEEEEcCC--CCCCcc-c---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCCC-CCe
Q 018318 182 PKLIICGGS--AYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRG-PRA 251 (358)
Q Consensus 182 ~~~v~~~~~--~~~~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~g-~~g 251 (358)
+.+|++... ..|... | ++++.++|++||+++|+|+.|. |+...+... ..++ ..|++++ .|.++| .+-
T Consensus 232 iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~~--gKglggG~Pl 308 (464)
T PRK06938 232 PAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS-GFGRTGKMFAFEHAGIIPDVVVL--SKAIGGSLPL 308 (464)
T ss_pred eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcHHHHHHhcCCCCCEEEe--eccccCCCce
Confidence 566777632 122222 2 7899999999999999999974 442222111 1123 5688776 688753 345
Q ss_pred eEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 252 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
|.++++++ + +.+.......+.+ .++..+++..+.++.+.++ ...++.++..++|++.|++
T Consensus 309 sAv~~~~~---------------~-~~~~~~~~~~T~~-gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~ 368 (464)
T PRK06938 309 AVVVYREW---------------L-DTWQPGAHAGTFR-GNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQ 368 (464)
T ss_pred EEEeehhH---------------h-hccCCCCCCCCCC-cCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHH
Confidence 66666653 2 2121111111111 2333344444555555332 4456666667777777765
No 372
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.68 E-value=1.7e-06 Score=82.00 Aligned_cols=248 Identities=17% Similarity=0.102 Sum_probs=124.6
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCC-CCCCCccccccCChHHHHHHHHhhc----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYSGSPANFAAYTAVL---- 118 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~v~~~sGt~a~~~~l~a~~---- 118 (358)
.|++.+|+.+.+..-. +....+..+.+ ..+| .++|+++..-. -+ .++++.||++|+..++...+
T Consensus 62 ~~~i~~Ai~~Q~~~l~---~~~~~~~t~~P-a~~L----A~~L~~~aP~~~l~---~vFf~~sGSeAvEtAlKma~qY~~ 130 (449)
T COG0161 62 RPEIAEAIKKQLDKLP---HVMFGGFTHEP-AIEL----AEKLAELAPEGGLD---HVFFTDSGSEAVETALKMALQYWR 130 (449)
T ss_pred CHHHHHHHHHHHHhCC---chhhcccCCch-HHHH----HHHHHHhCCCCCcc---EEEEeCCchHHHHHHHHHHHHHHH
Confidence 6889888888765421 11111223334 3333 36788877622 11 23556789999999987653
Q ss_pred ---CCCC-eEEEecCCCCccccccccccCCcccccccce-------------eEEeeccc--C-CC--CCC----CCHHH
Q 018318 119 ---EPHD-RIMGLDLPSGGHLTHGYYTSGGKKISATSIY-------------FESLPYKV--N-SS--TGY----IDYDK 172 (358)
Q Consensus 119 ---~~gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~--~-~~--~~~----id~~~ 172 (358)
+|+. +++.....|.|.- .+ .++..|.. ...++.+. . .. .+. -+.++
T Consensus 131 ~~G~p~r~~~Isr~~gYHG~T-~g-------a~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~ 202 (449)
T COG0161 131 ARGQPQRKKFISRRNGYHGDT-LG-------AMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADE 202 (449)
T ss_pred hcCCCcceEEEEeccCcCccc-ch-------heeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHH
Confidence 3443 3666655443321 01 11111100 00111111 0 00 011 23677
Q ss_pred HHHHHhhcCC---cEEEEcCCC---CCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEE
Q 018318 173 LEEKALDFRP---KLIICGGSA---YPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVT 239 (358)
Q Consensus 173 l~~~l~~~~~---~~v~~~~~~---~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~ 239 (358)
|+++|.++.| .++++.... .|...+ ++++.++|++||+++|+||. ..|+...|... ...+ ..|+++
T Consensus 203 le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~~FA~e~~gi~PDi~~ 281 (449)
T COG0161 203 LEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTGKMFACEHAGIVPDILC 281 (449)
T ss_pred HHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCchhhhhhhcCCCCCeee
Confidence 8888887664 355555322 222222 89999999999999999998 66765443221 0111 357766
Q ss_pred ecCCccCCCC--CeeEEEEeCCCCCCCCCCCCCccccHHHHhhhh-cCCCCcC---CCChhHHHHHHHHHHHhccHHHHH
Q 018318 240 TTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-VFPSLQG---GPHNHQIGALAVALKQASTPAFKA 313 (358)
Q Consensus 240 ~s~~K~l~g~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~al~~al~~~~~~~~~~ 313 (358)
. .|.+.|. +-|.++++++ +.+.+... .-....| +.++..-++..+.|+.+.+ +.
T Consensus 282 ~--aKGLT~GY~Pl~a~l~~~~---------------I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~---e~ 341 (449)
T COG0161 282 L--AKGLTGGYLPLSAVLTSDR---------------IYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEE---ED 341 (449)
T ss_pred e--cccccccchhhHhHhhhHH---------------HHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHh---cC
Confidence 4 5877442 3344444442 22222211 0000011 1122222222233443332 45
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 018318 314 YAKQVKANAVALGNYLTG 331 (358)
Q Consensus 314 ~~~~~~~~~~~l~~~L~~ 331 (358)
.+++..+...+|.+.|++
T Consensus 342 l~~~~~~~~~~l~~~L~~ 359 (449)
T COG0161 342 LLERVAEIGAYLQAGLQA 359 (449)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 677788888999999987
No 373
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.68 E-value=3.7e-06 Score=81.67 Aligned_cols=267 Identities=13% Similarity=0.060 Sum_probs=128.5
Q ss_pred cceeEeccC--C---CCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccc-cC
Q 018318 32 RGIELIASE--N---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQP-YS 105 (358)
Q Consensus 32 ~~~~l~a~~--~---~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~-~s 105 (358)
+.+.+..+- . .-+|.|.+|+.+.+.... +....++ ..+...+ ..++|.+++....... ..+++ +|
T Consensus 40 ~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~---~~~~~~~-~~~~~~~----lae~L~~~~p~~~~~~-~~~f~~~s 110 (442)
T TIGR00709 40 EYLDFLAGAGTLALGHNHPNMKQKILDYLQSGL---PLHTLDL-TTPLKDA----FIEALLNIIPKRKMDY-KLQFPGPS 110 (442)
T ss_pred EEEEccccHhhhcCCCCCHHHHHHHHHHHHhcc---Ccccccc-CcHHHHH----HHHHHHHhCCCcCCCc-cEEEeCCC
Confidence 456665542 2 237999999988775421 1111111 1222222 3367777764321000 12333 79
Q ss_pred ChHHHHHHHHhhc--CCCCeEEEecCCCCccccccccccCCccccccc-----ceeEEeecccCCC-----CCCCCHH--
Q 018318 106 GSPANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS-----IYFESLPYKVNSS-----TGYIDYD-- 171 (358)
Q Consensus 106 Gt~a~~~~l~a~~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~-----~~~id~~-- 171 (358)
|++|+..++.... ....+|++....|.|...... ...+......+ ..+..++++.... ....+.+
T Consensus 111 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~-s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (442)
T TIGR00709 111 GADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGAL-AVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNAS 189 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHH-hhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHH
Confidence 9999999987652 234578877765554421100 00000000000 0111122210000 0001112
Q ss_pred --HHHHHHhh-----cCCcEEEEcCC-CCC-Cc-c---chHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cc
Q 018318 172 --KLEEKALD-----FRPKLIICGGS-AYP-RD-W---DYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YC 235 (358)
Q Consensus 172 --~l~~~l~~-----~~~~~v~~~~~-~~~-~~-~---~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~ 235 (358)
.+++.+++ .+..+|++... .++ .. . =+++|.++|++||+++|.|++|. |+...+... ..++ ..
T Consensus 190 ~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~P 268 (442)
T TIGR00709 190 IEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA-GFGRSGTMFAFEHAGIEP 268 (442)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCchhHHHHcCCCC
Confidence 23444431 23456666542 222 22 2 28899999999999999999964 543333211 1122 46
Q ss_pred cEEEecCCccCC-CCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHH
Q 018318 236 HIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAY 314 (358)
Q Consensus 236 d~~~~s~~K~l~-g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~ 314 (358)
|+++ +.|.++ |.+-|+++++++ + +.+.......+. +.++...++..++++.+.++ ..
T Consensus 269 Div~--~gK~l~~G~Pigav~~~~~---------------~-~~~~~~~~~~T~-~gnpla~aaa~a~L~~i~~~---~l 326 (442)
T TIGR00709 269 DFVV--MSKAVGGGLPLAVLLIAPE---------------F-DAWQPAGHTGTF-RGNQLAMVTGTEALNYWKDD---NL 326 (442)
T ss_pred cEEE--EcccccCCcccEEEEEchH---------------H-hccCCCcCCCCC-CcCHHHHHHHHHHHHHHHhc---CH
Confidence 8877 689884 445577777663 1 111111111111 12333444445556554332 34
Q ss_pred HHHHHHHHHHHHHHHhh
Q 018318 315 AKQVKANAVALGNYLTG 331 (358)
Q Consensus 315 ~~~~~~~~~~l~~~L~~ 331 (358)
.++..++.++|++.|++
T Consensus 327 ~~~~~~~g~~l~~~L~~ 343 (442)
T TIGR00709 327 AQNAQERGERITSFLDD 343 (442)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55667777777777765
No 374
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.58 E-value=7.4e-07 Score=81.14 Aligned_cols=270 Identities=12% Similarity=0.097 Sum_probs=144.0
Q ss_pred cceeEeccCCCCCHHHHHHHhcccccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCcccccc-CChH
Q 018318 32 RGIELIASENFTSFAVIEALGSALTNKYSEGMP--GNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPY-SGSP 108 (358)
Q Consensus 32 ~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~--~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~-sGt~ 108 (358)
+..++.+++..+|++|++...+.+..-.+.|.. ...|+ +.++...++ ++++.++++++++.+.- +++.. ++|.
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHR-sk~~~~v~~-~a~~~lreLl~iPd~Y~--VlflqGGat~ 80 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHR-SKEFKNVLE-EAEKDLRELLNIPDDYK--VLFLQGGATG 80 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccc-cHHHHHHHH-HHHHHHHHHhCCCCCce--EEEEcCccHH
Confidence 456778899999999999988777655443432 12222 234444454 56788999999998532 23333 3456
Q ss_pred HHHHHHHhhcCCCCe--EEEecCCCCccccccccccCCcccccccceeEEeecc-cCCC-CCCCCHHHHHHHHhhcCCcE
Q 018318 109 ANFAAYTAVLEPHDR--IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK-VNSS-TGYIDYDKLEEKALDFRPKL 184 (358)
Q Consensus 109 a~~~~l~a~~~~gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-~~~id~~~l~~~l~~~~~~~ 184 (358)
...++..+++.++.. |..... +. ++. +.++..+....+.... ...+ ...++++..+ +.+ +...
T Consensus 81 qf~~~p~nLl~~~~~~yv~~g~W--s~-~a~-------~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ay 147 (365)
T COG1932 81 QFAMAPMNLLGKRGTDYVDTGAW--SE-FAI-------KEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAY 147 (365)
T ss_pred HHHHHHHhhhcccCceeEeeeeh--hH-hHH-------HHHHHhcccccccccceeccCccCCCChhhcc--cCC-CccE
Confidence 777788888654432 333221 11 001 0111111101111111 1111 1234554433 322 2344
Q ss_pred EEEcCCC--CCCcc-chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeCCC
Q 018318 185 IICGGSA--YPRDW-DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGP 260 (358)
Q Consensus 185 v~~~~~~--~~~~~-~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~~~ 260 (358)
|..+..+ .|... +...+. . +.++++|.+.. +.. .+.++...|++.++.+|.+ ||.| ++++.+++.
T Consensus 148 v~~~~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~--ils---r~iDvsk~dviyagaQKnl-GpaGltvvIvr~~~ 216 (365)
T COG1932 148 VHFCWNETISGVEVPELPDIG---S--DGLLVADASSA--ILS---RPIDVSKYDVIYAGAQKNL-GPAGLTVVIVRPDL 216 (365)
T ss_pred EEEecCCcccceEccCCCCCC---C--CceEEEecccH--Hhc---CCCChhHcceEEEehhhcc-CccceEEEEEcHHH
Confidence 6555443 34322 223322 1 28999999743 221 1234458899999999997 6777 777777753
Q ss_pred CC-CCCC-CCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHhhCCc
Q 018318 261 KP-PKKG-QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKGY 334 (358)
Q Consensus 261 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~G~ 334 (358)
.. .... -+.+. ++..... ...+..+|....+.-+...++.+... +++...+|-.++++.|.+.+.+.+|
T Consensus 217 l~r~~~~~~P~if--~y~~~~~---~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~f 288 (365)
T COG1932 217 LERAESYTLPSIF--DYLTHAD---NGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDF 288 (365)
T ss_pred HhcccccCCchHh--hchhhhc---cCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 22 1111 11111 1111111 11122345544454455666665543 4588899999999999999999875
No 375
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.58 E-value=3.4e-06 Score=86.77 Aligned_cols=227 Identities=16% Similarity=0.055 Sum_probs=122.0
Q ss_pred HHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cC--CCCeEEEecCCCCccccccccccCCcccccccceeEEeec
Q 018318 83 RSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY 159 (358)
Q Consensus 83 ~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (358)
...++++.|.+-.. +.+ .-.+|.+-++++.+. .. +..+|++....|+....... -...+.+++++
T Consensus 130 Qtmi~~LtGm~vaN--ASl-~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~-------t~~~~~g~~i~-- 197 (954)
T PRK12566 130 QQMTIDLTGLDLAN--ASL-LDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLR-------TRAEGFGFELV-- 197 (954)
T ss_pred HHHHHHHhCchhhh--hhh-ccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHH-------HhhhcCCcEEE--
Confidence 47899999998521 111 123343333333333 22 24678887766643221000 00112222222
Q ss_pred ccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC-CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccE
Q 018318 160 KVNSSTGYIDYDKLEEKALDFRPKLIICGGSA-YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHI 237 (358)
Q Consensus 160 ~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~-~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~ 237 (358)
.+++++++.+ .+..|++..|+ +|.+.|+++|.+++|++|+++++ ++--+.+. .+..|-+ |+||
T Consensus 198 ----------~~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~-~~d~laL~---ll~~Pge~GADI 262 (954)
T PRK12566 198 ----------VDAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACV-AADLLSLL---VLTPPGELGADV 262 (954)
T ss_pred ----------EcchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEE-EeCHHHHh---CCCChhhcCCcE
Confidence 1334444433 45667776666 56777999999999999998664 33222211 1223445 9999
Q ss_pred EEecCCc-----cCCCCCeeEEEEeCCCCCCC----------CCCCCCccccH---HHHhhhhcCCCCcCCCChhHHHHH
Q 018318 238 VTTTTHK-----SLRGPRAGMIFYRKGPKPPK----------KGQPEGAVYDF---EDKINFAVFPSLQGGPHNHQIGAL 299 (358)
Q Consensus 238 ~~~s~~K-----~l~g~~gG~i~~~~~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~al 299 (358)
++++.+- .++||..||+.+++++.+.. ..|+.-+...+ ...|+...- ++.-.....+.++
T Consensus 263 ~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKA--tSNICT~qaL~A~ 340 (954)
T PRK12566 263 VLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKA--NSNICTAQVLLAN 340 (954)
T ss_pred EeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccc--cchhhHHHHHHHH
Confidence 9987774 35788889999988764321 22332210011 122332111 0000111222222
Q ss_pred HHH-HHHh-ccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 300 AVA-LKQA-STPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 300 ~~a-l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
.++ +..+ ..+++.++.++..+++.+|++.|.+.|+++..
T Consensus 341 ~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~ 381 (954)
T PRK12566 341 IAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLN 381 (954)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 222 2222 33567888888999999999999999998754
No 376
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.56 E-value=1.4e-05 Score=78.03 Aligned_cols=197 Identities=14% Similarity=0.071 Sum_probs=101.5
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCC--CCCCccccccCChHHHHHHHHhhcC--
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDP--TQWGVNVQPYSGSPANFAAYTAVLE-- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~--~~~~~~v~~~sGt~a~~~~l~a~~~-- 119 (358)
+|+|.+|+.+.+.. ....... .+ ..+...++ .+++.+++.... .......+++||++|+..++.....
T Consensus 82 ~p~i~~Ai~~q~~~-l~~~~~~-~~--~~~~~~~l----ae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~ 153 (472)
T PRK08742 82 EPRIGAAIAAQAGE-LEQVMLA-GF--THEPAVQL----AEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYF 153 (472)
T ss_pred CHHHHHHHHHHHHh-CCCcccc-cc--CCHHHHHH----HHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHH
Confidence 79999998877642 1111110 11 12222233 366777664210 0000235668899999999876521
Q ss_pred -----C-CCeEEEecCCCCccccccccccCCcccccccc------------eeEEeecccCCC-C-C-------CCCHHH
Q 018318 120 -----P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSS-T-G-------YIDYDK 172 (358)
Q Consensus 120 -----~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~-~-~-------~id~~~ 172 (358)
+ ..+|+.....|.|.... .+...+. .+..++.+.... . + ..+++.
T Consensus 154 ~~~g~~~r~~ii~~~~syHG~t~g--------als~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 225 (472)
T PRK08742 154 HNRGEHRRTRFIALENGYHGETIG--------ALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADA 225 (472)
T ss_pred HhcCCCCCcEEEEECCCcCCCchh--------hhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHH
Confidence 2 35788877665443210 0111110 011111110000 0 0 113567
Q ss_pred HHHHHhh--cCCcEEEEcCC---CCCCcc-c---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEe
Q 018318 173 LEEKALD--FRPKLIICGGS---AYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTT 240 (358)
Q Consensus 173 l~~~l~~--~~~~~v~~~~~---~~~~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~ 240 (358)
+++.+++ .++.+|++... ..|... | ++++.++|++||+++|+||.|. |+...+... ..++ ..|++++
T Consensus 226 l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~T-GfGRtG~~~a~e~~gv~PDiv~~ 304 (472)
T PRK08742 226 LQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIAT-GFGRTGTLFACEQAGVMPDLLCL 304 (472)
T ss_pred HHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchHHHhcCCCCCEEEE
Confidence 7777753 23566777641 223222 2 7899999999999999999974 442222111 1112 5688776
Q ss_pred cCCccCCCC--CeeEEEEeCC
Q 018318 241 TTHKSLRGP--RAGMIFYRKG 259 (358)
Q Consensus 241 s~~K~l~g~--~gG~i~~~~~ 259 (358)
.|.|+|. +-|.++++++
T Consensus 305 --gKgl~gG~~Plaav~~~~e 323 (472)
T PRK08742 305 --SKGLTGGFLPLSAVLATQQ 323 (472)
T ss_pred --cccccCCCCCcceeeccHH
Confidence 6888543 4566666663
No 377
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.56 E-value=4.4e-06 Score=80.87 Aligned_cols=83 Identities=18% Similarity=0.101 Sum_probs=50.8
Q ss_pred HHHHHHHHhh--cCCcEEEEcCC--CCCC----ccchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEE
Q 018318 170 YDKLEEKALD--FRPKLIICGGS--AYPR----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIV 238 (358)
Q Consensus 170 ~~~l~~~l~~--~~~~~v~~~~~--~~~~----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~ 238 (358)
++++++.+.. .++.+|++... +.|. ..-+++|.++|++||+++|+|++|. |+...+... ..++ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence 4556666653 24567777632 2232 2348899999999999999999986 443222110 1123 57888
Q ss_pred EecCCccCCCCCeeEEEEe
Q 018318 239 TTTTHKSLRGPRAGMIFYR 257 (358)
Q Consensus 239 ~~s~~K~l~g~~gG~i~~~ 257 (358)
++ .|.+ |.+|++...
T Consensus 284 ~~--gK~~--~~~g~~~~~ 298 (431)
T TIGR03251 284 AF--GKKT--QVCGIMAGR 298 (431)
T ss_pred Ee--cccC--ccceEEecc
Confidence 64 6765 455666544
No 378
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.53 E-value=1.2e-05 Score=78.36 Aligned_cols=256 Identities=15% Similarity=0.110 Sum_probs=119.8
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccc-cCChHHHHHHHHhhc--CC
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQP-YSGSPANFAAYTAVL--EP 120 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~-~sGt~a~~~~l~a~~--~~ 120 (358)
+|+|.+|+.+.+..... .....+ ..+...+ ..+++.+++....... ..+++ +||++|+..++.... ..
T Consensus 76 ~p~v~~Ai~~q~~~~~~--~~~~~~--~~~~~~~----lAe~L~~~~p~~~~~~-~~~f~~~SGsEAve~AlklAr~~tg 146 (459)
T PRK06931 76 HPDVLQSIQDVLTSGLP--LHTLDL--TTPLKDA----FSEYLLSLLPGQGKEY-CLQFTGPSGADAVEAAIKLAKTYTG 146 (459)
T ss_pred CHHHHHHHHHHHhhhcc--cccccc--CCHHHHH----HHHHHHHhCCCccccc-eEEEeCCCcHHHHHHHHHHHHHhcC
Confidence 79999999887753211 001011 1122222 3366777764321000 12344 699999999987652 33
Q ss_pred CCeEEEecCCCCccccccc-cccC--C-cccccccceeEEeecccCCC---C--CCCCHHHH----HHHHhh-----cCC
Q 018318 121 HDRIMGLDLPSGGHLTHGY-YTSG--G-KKISATSIYFESLPYKVNSS---T--GYIDYDKL----EEKALD-----FRP 182 (358)
Q Consensus 121 gd~Vl~~~~~~~~~~~~~~-~~~~--~-~~~~~~g~~~~~~~~~~~~~---~--~~id~~~l----~~~l~~-----~~~ 182 (358)
.++|+.....|.|...... .+.. . ....-...++..++++.... + ..-+.+.+ ++.+++ .+.
T Consensus 147 r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (459)
T PRK06931 147 RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKP 226 (459)
T ss_pred CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCce
Confidence 4578877766555421110 0000 0 00000001112222210000 0 01123333 333321 124
Q ss_pred cEEEEcCC--CCCCc-cc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCCC-CCee
Q 018318 183 KLIICGGS--AYPRD-WD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRG-PRAG 252 (358)
Q Consensus 183 ~~v~~~~~--~~~~~-~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~g-~~gG 252 (358)
.+|++... +.|.. .| ++++.++|++||+++|+||.|. |+...+... ..++ ..|++++ .|.++| .+.|
T Consensus 227 AAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~t-GfGRtG~~~a~~~~gv~PDivt~--gK~l~gG~Pi~ 303 (459)
T PRK06931 227 AAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQA-GFARTGKMFAFEHAGIEPDIIVM--SKAVGGGLPLA 303 (459)
T ss_pred EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-cCCcCchHHHhhhcCCCCCEEEe--cccccCCccee
Confidence 56776532 22322 22 7899999999999999999974 442222110 1122 5688766 688853 3445
Q ss_pred EEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
.++.+++ + +.+.......+.+ .++..+++..+.++.+.++ ...++..+..++|++.|++
T Consensus 304 av~~~~~---------------~-~~~~~~~~~~T~~-gnpla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~ 362 (459)
T PRK06931 304 VLGIKKE---------------F-DAWQPGGHTGTFR-GNQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAE 362 (459)
T ss_pred eeeeHHH---------------H-hhccCCCCCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHH
Confidence 5665542 2 2221111111111 2333344444555554332 3455566666777776654
No 379
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.50 E-value=2.8e-06 Score=78.86 Aligned_cols=177 Identities=12% Similarity=0.061 Sum_probs=93.0
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChH-HHHHHHHhhc--CCCCeEEEecCCCCccccccccccCCccc
Q 018318 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP-ANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKKI 147 (358)
Q Consensus 71 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~-a~~~~l~a~~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 147 (358)
|......|-+....-+-+..|+.... .++.+.-.|. .+.+.+.++. ..++.|+.+...|-+-+ +.+
T Consensus 50 Gss~~~~ltn~l~~d~~~~~G~~~~~--~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~---------kai 118 (389)
T PF05889_consen 50 GSSLLAKLTNSLVLDALRLAGLRSVK--SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCF---------KAI 118 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHTTHC--EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHH---------HHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCcccc--ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchH---------HHH
Confidence 33333333333333344567876421 1122222232 4555566653 45677877776554322 345
Q ss_pred ccccceeEEeecccCCCCCCCCHHHHHHHHhhcCCc--EEEEcCCC--CCCcc-chHHHHHHHHHhCCEEEEechhhhhh
Q 018318 148 SATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPK--LIICGGSA--YPRDW-DYARFRAVADKCGALLLCDMAHISGL 222 (358)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~--~v~~~~~~--~~~~~-~l~~i~~la~~~g~~lvvD~a~~~g~ 222 (358)
..+|.+..+++.....+.-..|.+.+++++++.... +.++++++ .|... ++++|+++|++||++.++..|.+.-.
T Consensus 119 ~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~ 198 (389)
T PF05889_consen 119 ERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQS 198 (389)
T ss_dssp HHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-
T ss_pred HhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhH
Confidence 567765555553222223357889999999765433 33444433 45444 49999999999999999999854310
Q ss_pred hhc-cccC--CCCCcccEEEecCCccCCCCCeeEEEEeC
Q 018318 223 VAA-QEAA--NPFEYCHIVTTTTHKSLRGPRAGMIFYRK 258 (358)
Q Consensus 223 ~~~-~~~~--~~~~~~d~~~~s~~K~l~g~~gG~i~~~~ 258 (358)
... ..+. .....+|+++-|+-|.|.-|-||.+++..
T Consensus 199 ~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~ 237 (389)
T PF05889_consen 199 SKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASF 237 (389)
T ss_dssp HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEES
T ss_pred HHHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEec
Confidence 000 0000 00125799999999998778776555544
No 380
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.46 E-value=2e-05 Score=72.77 Aligned_cols=193 Identities=22% Similarity=0.207 Sum_probs=104.3
Q ss_pred CHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcC----
Q 018318 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (358)
Q Consensus 44 ~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~---- 119 (358)
.|+|.+++...+.. .+ .....++ ..+ ..+++ +.+.+..+-...+ -+.++.|||+|+..++....+
T Consensus 74 npev~ral~~q~~k-~~--hs~~~~~-t~e-av~l~----~~l~~~~~~~~~~--rvff~nsGTeAne~ALK~Ark~~~~ 142 (433)
T KOG1401|consen 74 NPEVARALAEQAKK-LG--HSSNGYF-TLE-AVELE----EVLSAVLGKGSAE--RVFFCNSGTEANETALKFARKFTGK 142 (433)
T ss_pred CHHHHHHHHHHHhh-he--eccCccc-cHH-HHHHH----HHHHhcccCCCcc--EEEEecCCcHHHHHHHHHHHHhhcc
Confidence 79999999876643 21 1111111 112 22333 5566666322221 235567899999999876532
Q ss_pred --CCC--eEEEecCCCCccccccccccCCccccccc-----ceeEEeecccCCCCCCCCHHHHHHHHhhcC--CcEEEEc
Q 018318 120 --PHD--RIMGLDLPSGGHLTHGYYTSGGKKISATS-----IYFESLPYKVNSSTGYIDYDKLEEKALDFR--PKLIICG 188 (358)
Q Consensus 120 --~gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~id~~~l~~~l~~~~--~~~v~~~ 188 (358)
|-+ +++.....|.|.. .+ .+...+ ...+..--++- .--..|..+++++++.++ ..+||+.
T Consensus 143 ~~~~~~t~~Iaf~nsyHG~t-lg-------als~~~~s~y~~~~~p~~p~v~-~~~ynd~t~l~k~~~~h~~~IaAVIvE 213 (433)
T KOG1401|consen 143 KHPEKKTKFIAFENSYHGRT-LG-------ALSVTGNSKYGLPFDPIAPDVV-TAEYNDSTALEKLFESHKGEIAAVIVE 213 (433)
T ss_pred cCCccceeEEEEecCcCCcc-hh-------HHHhhcccccCCCCCCCCCcee-ecccCCHHHHHHHHHhCCCceEEEEEe
Confidence 222 3787776665542 11 111111 10111000000 001357899999998765 4567776
Q ss_pred CCC-CCC--ccc---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccEEEecCCccCC-CCCeeEEEEeC
Q 018318 189 GSA-YPR--DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GPRAGMIFYRK 258 (358)
Q Consensus 189 ~~~-~~~--~~~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~~~~s~~K~l~-g~~gG~i~~~~ 258 (358)
.-. .|. +.+ +..|.++|+++|++||.|+.|. |+...+... ..+. ..|+.+ .-|.|+ |.+-|+..+++
T Consensus 214 PiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t-G~gR~g~~~a~e~~~~~PDI~t--~aK~L~gGlPigA~~v~~ 290 (433)
T KOG1401|consen 214 PIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT-GLGRLGYGWAQEYFGVTPDITT--VAKPLGGGLPIGATGVRD 290 (433)
T ss_pred cccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh-CccccchHHHHHHhCcCCccee--ehhhccCCceeEEEeehH
Confidence 322 222 222 5688899999999999999964 443222110 1112 347654 458774 45667777777
Q ss_pred C
Q 018318 259 G 259 (358)
Q Consensus 259 ~ 259 (358)
+
T Consensus 291 k 291 (433)
T KOG1401|consen 291 K 291 (433)
T ss_pred H
Confidence 4
No 381
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.42 E-value=9.8e-06 Score=78.66 Aligned_cols=142 Identities=15% Similarity=0.069 Sum_probs=75.3
Q ss_pred CHHHHHHHHhhc--CCcEEEEcCC--CCCC----ccchHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-cccE
Q 018318 169 DYDKLEEKALDF--RPKLIICGGS--AYPR----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHI 237 (358)
Q Consensus 169 d~~~l~~~l~~~--~~~~v~~~~~--~~~~----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~-~~d~ 237 (358)
|++++++.+.++ ++.+|++... +.|. ..-+++|.++|++||+++|+||+|. |+...+... ..++ ..|+
T Consensus 211 ~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDi 289 (443)
T PRK08297 211 ALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDI 289 (443)
T ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCE
Confidence 346667777542 4567777632 2232 2348899999999999999999974 432222110 1122 5688
Q ss_pred EEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHH-Hhh-hhcCCCCcCCCChhHHHHHHHHHHHhccHHHHHHH
Q 018318 238 VTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFED-KIN-FAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (358)
Q Consensus 238 ~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~ 315 (358)
++ +.|.+ |.+|++..++ +. ++.. .+. ......+.+ .+...+++..++++.+.+ +...
T Consensus 290 v~--~gK~l--~~~a~l~~~~-i~------------~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~---~~l~ 348 (443)
T PRK08297 290 VA--FGKKT--QVCGIMAGRR-VD------------EVEDNVFAVSSRINSTWG-GNLVDMVRARRILEVIEE---DGLV 348 (443)
T ss_pred EE--ecccc--cccceecchH-HH------------HhhhhhccCccccCCCCC-ccHHHHHHHHHHHHHHHh---cCHH
Confidence 86 57876 3456655433 00 1110 111 000111111 233334443445554432 2456
Q ss_pred HHHHHHHHHHHHHHhhC
Q 018318 316 KQVKANAVALGNYLTGK 332 (358)
Q Consensus 316 ~~~~~~~~~l~~~L~~~ 332 (358)
++..+..++|++.|++.
T Consensus 349 ~~~~~~g~~l~~~L~~l 365 (443)
T PRK08297 349 ENAARQGEYLLARLEEL 365 (443)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66777778887777653
No 382
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.41 E-value=1.4e-05 Score=77.63 Aligned_cols=76 Identities=14% Similarity=0.204 Sum_probs=48.7
Q ss_pred CHHHHHHHHhhc--CCcEEEEcCC--CCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccC--C--CCC-cc
Q 018318 169 DYDKLEEKALDF--RPKLIICGGS--AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--N--PFE-YC 235 (358)
Q Consensus 169 d~~~l~~~l~~~--~~~~v~~~~~--~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~--~~~-~~ 235 (358)
+++.++++++++ +..+|+++.. +.|...+ +++|.++|++||+++|+|++| .|+...+... . .+. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCC
Confidence 466788888643 3566777632 2344444 899999999999999999998 5553322210 0 111 37
Q ss_pred cEEEecCCccCC
Q 018318 236 HIVTTTTHKSLR 247 (358)
Q Consensus 236 d~~~~s~~K~l~ 247 (358)
|++++ .|.++
T Consensus 316 Di~t~--gK~lg 325 (464)
T TIGR00699 316 DMVTF--SKKFQ 325 (464)
T ss_pred CEEEe--hhhhc
Confidence 88554 79874
No 383
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.39 E-value=0.00011 Score=67.76 Aligned_cols=281 Identities=17% Similarity=0.158 Sum_probs=127.8
Q ss_pred hcceeEeccCCCCCHHHHHHHhcccccCCCCC-----CCCCCCC-CCchhHHHHHHHHHHHHHHhcCCCCCCCCcccccc
Q 018318 31 CRGIELIASENFTSFAVIEALGSALTNKYSEG-----MPGNRYY-GGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPY 104 (358)
Q Consensus 31 ~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g-----~~~~~~~-~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~ 104 (358)
.+.+.|..+-.-++++=++ +...+..-.+.. -...|.| ++.....+ +|+.+++++|++.++ |+..
T Consensus 22 a~~L~LdmtRGKPs~eQLd-LS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe----~r~l~a~llgv~~~~----viv~ 92 (425)
T PF12897_consen 22 AKGLKLDMTRGKPSPEQLD-LSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPE----ARELFAELLGVPPEN----VIVG 92 (425)
T ss_dssp HTT--EES---S--HHHHH-GGGGGGGSSTTCCBECTTEBTTSS-S-SS--HH----HHHHHHHHHTS-GGG----EEE-
T ss_pred HcCCCcccCCCCCCHHHHh-hhHHHhcCCCCccccCCCccccCCCCccCChHH----HHHHHHHHhCCCHHH----EEEe
Confidence 4678888776666665554 233333322211 1234667 66666644 458899999999853 3333
Q ss_pred -CCh-HHHHHHH-Hhhc----------CCCC--eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCC
Q 018318 105 -SGS-PANFAAY-TAVL----------EPHD--RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYID 169 (358)
Q Consensus 105 -sGt-~a~~~~l-~a~~----------~~gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id 169 (358)
+.+ ..++-++ .+++ ...+ +.+|+.|-|--||+ ..+..|.+...++. + ...+|
T Consensus 93 gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa---------i~E~~Giemi~VpM--~--~dGPD 159 (425)
T PF12897_consen 93 GNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA---------ITEHFGIEMIPVPM--T--EDGPD 159 (425)
T ss_dssp SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH---------HHHHCT-EEEEEEE--E--TTEE-
T ss_pred ccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH---------HHHhhCcEEEecCC--C--CCCCC
Confidence 333 2222222 2221 1122 56899988776663 34567765444444 3 34799
Q ss_pred HHHHHHHHhh-cCCcEEEEcC-CCCC--Cccc---hHHHHHH-HHHhCCEEEEechhhhhhhhccc-cCC--C-CC----
Q 018318 170 YDKLEEKALD-FRPKLIICGG-SAYP--RDWD---YARFRAV-ADKCGALLLCDMAHISGLVAAQE-AAN--P-FE---- 233 (358)
Q Consensus 170 ~~~l~~~l~~-~~~~~v~~~~-~~~~--~~~~---l~~i~~l-a~~~g~~lvvD~a~~~g~~~~~~-~~~--~-~~---- 233 (358)
.|.++++..+ ...|.+++.. -+|| ...+ +++|+.+ +...+..+++|.|.+....+... ... + ++
T Consensus 160 mD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~ 239 (425)
T PF12897_consen 160 MDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAK 239 (425)
T ss_dssp HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHH
T ss_pred HHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHH
Confidence 9999999854 3356676432 2344 2222 5566655 34579999999998777664321 111 1 11
Q ss_pred --ccc--EEEecCCcc-CCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhcc
Q 018318 234 --YCH--IVTTTTHKS-LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAST 308 (358)
Q Consensus 234 --~~d--~~~~s~~K~-l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~ 308 (358)
..| +.++|++|. |+|..-+++.++.+ ++....+......+ ++. .+--+. -.+.+..
T Consensus 240 AGnpdrv~~F~STSKITf~GaGva~~aaS~~--------------Nl~~~~~~~~~~tI--gpd--KvNQLR-Hvrff~d 300 (425)
T PF12897_consen 240 AGNPDRVYVFASTSKITFPGAGVAFFAASEA--------------NLAWIKKHLSVQTI--GPD--KVNQLR-HVRFFKD 300 (425)
T ss_dssp TT-TTSEEEEEESTTTS-TTSS-EEEEE-HH--------------HHHHHHHHHHHH-S-------HHHHHH-HHHHHHS
T ss_pred cCCCCeEEEEecccccccCCcceeeeecCHH--------------HHHHHHHHhcCcee--Ccc--HHHHHH-HHHHhcC
Confidence 233 778899994 56655588888774 33322221111111 111 111111 1111111
Q ss_pred -H-HHHHHHHHHH--------HHHHHHHHHHh-hCCceeeeCCCcceEEEEEcCC
Q 018318 309 -P-AFKAYAKQVK--------ANAVALGNYLT-GKGYSLVTGGTENHLVLWDLRP 352 (358)
Q Consensus 309 -~-~~~~~~~~~~--------~~~~~l~~~L~-~~G~~~~~~~~~~~~~~v~~~~ 352 (358)
+ ++.++++++. ...+.|.+.|. ..|+--+..+..++.+++++-+
T Consensus 301 ~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~ 355 (425)
T PF12897_consen 301 AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD 355 (425)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST
T ss_pred hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC
Confidence 2 2333333322 22345666776 5677667767889999998753
No 384
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.38 E-value=1.9e-05 Score=72.40 Aligned_cols=112 Identities=20% Similarity=0.152 Sum_probs=64.6
Q ss_pred hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC--c--ccEEEecCCccCC-CCCeeEEEEeCCCCCCCCCCCCCcc
Q 018318 198 YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--Y--CHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKGQPEGAV 272 (358)
Q Consensus 198 l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~--~--~d~~~~s~~K~l~-g~~gG~i~~~~~~~~~~~~~~~~~~ 272 (358)
+++..++|+++|.++|.|++|. |+...| .-+-++ + .||+ |..|.++ |.+-|.+++..
T Consensus 235 lka~~~~v~k~Ggl~IaDEVqt-GfGRtG-~~wgfe~h~v~PDIv--TmAKgiGnG~Pl~AVvtt~-------------- 296 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQT-GFGRTG-HMWGFESHGVVPDIV--TMAKGIGNGFPLGAVVTTP-------------- 296 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhhh-cccccc-ccccccccCCCccHH--HHHhhccCCCcceeeecCH--------------
Confidence 8899999999999999999985 544333 112233 2 3554 5678884 44456666666
Q ss_pred ccHHHHhhhhc-CCCCcCCCChhHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 018318 273 YDFEDKINFAV-FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 273 ~~~~~~~~~~~-~~~~~~~~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (358)
++.+-+.+.. +..+.++-... -+.-.+.|+.+.+ +...++..+...+|.+.|.+.
T Consensus 297 -EIa~v~~~~~~~fnTyggnP~a-~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l 352 (442)
T KOG1404|consen 297 -EIADVLNQKSSHFNTYGGNPVA-CAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAAL 352 (442)
T ss_pred -HHHHHHHhccccccccCCCchh-HHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHH
Confidence 4555555443 22222322212 1221234444433 344555666677888777653
No 385
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.19 E-value=0.00025 Score=73.33 Aligned_cols=86 Identities=13% Similarity=0.009 Sum_probs=52.8
Q ss_pred HHHHHHHhh-------cCCcEEEEcCC--C-CCCcc-c---hHHHHHHHHHhCCEEEEechhhhhhhhccccC--CCCC-
Q 018318 171 DKLEEKALD-------FRPKLIICGGS--A-YPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE- 233 (358)
Q Consensus 171 ~~l~~~l~~-------~~~~~v~~~~~--~-~~~~~-~---l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~--~~~~- 233 (358)
+.+++.|++ .+..+|++... . .|... | +++|.++|++||+++|+||.+ .|+...|... ..++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~-TGfGRtG~~fa~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVF-TGLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecc-cCCCcccchhhHHhcCC
Confidence 557777753 23456776642 1 23322 2 789999999999999999995 4653333211 1112
Q ss_pred cccEEEecCCccCCCC--CeeEEEEeCC
Q 018318 234 YCHIVTTTTHKSLRGP--RAGMIFYRKG 259 (358)
Q Consensus 234 ~~d~~~~s~~K~l~g~--~gG~i~~~~~ 259 (358)
..|++++ .|.|+|. +.|.++++++
T Consensus 646 ~PDIi~~--gKgLtgG~~Plaa~l~~~~ 671 (817)
T PLN02974 646 KPDIACY--AKLLTGGLVPLAATLATEE 671 (817)
T ss_pred CCCEEee--cccccCCCCccEEEEEcHH
Confidence 4688765 5887543 5566667663
No 386
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.02 E-value=7.9e-05 Score=66.34 Aligned_cols=235 Identities=13% Similarity=0.070 Sum_probs=130.0
Q ss_pred HHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhhcCCCC---eEEEecCCCCccccccccccCCcccccccceeE--E
Q 018318 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHD---RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFE--S 156 (358)
Q Consensus 82 ~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~~~~gd---~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~ 156 (358)
+-..++.+.|+...|+ .| .++=|.-++.++.++.+|-. +|+.-...+++ -.|.-. +.+++.|+..+ .
T Consensus 116 il~l~~~iVGA~e~Ev--av-mNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPS---DhYAie--sQ~~lhG~~~e~sm 187 (465)
T KOG3846|consen 116 ILPLLAPIVGAQENEV--AV-MNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPS---DHYAIE--SQCKLHGISPENSM 187 (465)
T ss_pred hhhhhhhhccCCchhh--hh-HhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCc---hHHHHH--hhhhhcCCChHHhe
Confidence 3467889999988653 22 24445556666777766643 46654433332 222111 23445554332 1
Q ss_pred eecccCCCCCCCCHHHHHHHHhhcCCc--EEEEcCCC--CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC
Q 018318 157 LPYKVNSSTGYIDYDKLEEKALDFRPK--LIICGGSA--YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 232 (358)
Q Consensus 157 ~~~~~~~~~~~id~~~l~~~l~~~~~~--~v~~~~~~--~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~ 232 (358)
+.++-.+....+..+++.+.|+++.-. +|+++... +|.-.|+.+|...-+..|++|=.|-||+.|-+. .-+
T Consensus 188 ~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVp-----L~L 262 (465)
T KOG3846|consen 188 IQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVP-----LQL 262 (465)
T ss_pred EEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCc-----eEE
Confidence 222212223468889999999886643 44444433 456779999996667779999999999987432 112
Q ss_pred -C-cccEEEecCCccC-CCCCe-eEEEEeCCCC-CCC-C-CCCCCccccHHHHhh--------hhcCCCCcCCCChhHHH
Q 018318 233 -E-YCHIVTTTTHKSL-RGPRA-GMIFYRKGPK-PPK-K-GQPEGAVYDFEDKIN--------FAVFPSLQGGPHNHQIG 297 (358)
Q Consensus 233 -~-~~d~~~~s~~K~l-~g~~g-G~i~~~~~~~-~~~-~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 297 (358)
+ ++|+.+-...|.+ +|+.| |.++...... ... + .|=+-. +...++. .....+-.++|.+..++
T Consensus 263 HdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh--~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~ 340 (465)
T KOG3846|consen 263 HDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGH--DPSKRFQMDNVLELIPGALGFRISNPPIIDVV 340 (465)
T ss_pred eecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccC--CcchhhhhccccccCccccccccCCCcHhHHH
Confidence 3 8999998889987 45544 4344433221 110 0 000000 1111110 11111224567778888
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 018318 298 ALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (358)
Q Consensus 298 al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (358)
++..+|+...+-.+.+.++|..-...|+...++.
T Consensus 341 al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~ 374 (465)
T KOG3846|consen 341 ALRSSLELFAQFNINELRKRSLLLTGYLEYLLKA 374 (465)
T ss_pred HHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHH
Confidence 8888888765434456666656566666655544
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.59 E-value=0.0034 Score=61.49 Aligned_cols=223 Identities=13% Similarity=0.064 Sum_probs=121.6
Q ss_pred HHHHHhcCCCCCCCCccccccCChHHHHHHHHhh-cCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccC
Q 018318 84 SRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN 162 (358)
Q Consensus 84 ~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 162 (358)
..++++.|.+-.. + -..-.||.|-++...+. ..++.+.++....|+-..+..- -+..+.++.++
T Consensus 170 Tmi~dlTGL~~aN--A-SLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~-------TRa~~~~i~v~----- 234 (1001)
T KOG2040|consen 170 TMITDLTGLPMAN--A-SLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVK-------TRAKGFGIKVV----- 234 (1001)
T ss_pred HhhhhccCCcccc--h-hhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhh-------ccccccceeEE-----
Confidence 5577888887532 1 12345777555554444 5567788888877764332110 01112111111
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCC-CCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEe
Q 018318 163 SSTGYIDYDKLEEKALDFRPKLIICGGSA-YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTT 240 (358)
Q Consensus 163 ~~~~~id~~~l~~~l~~~~~~~v~~~~~~-~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~ 240 (358)
..|+++...-. + ....|.+..+. .|.+.|.+++.+.++..|.++++-.- .+.+. .+..|-+ |+||+++
T Consensus 235 ----~~~~~~~~~s~-~-~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~atD-LLaLt---iLrpPgefGaDIavG 304 (1001)
T KOG2040|consen 235 ----VSDIKEADYSS-K-DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMATD-LLALT---ILRPPGEFGADIAVG 304 (1001)
T ss_pred ----ecCHHHhhccc-c-ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEeeh-hhHHH---ccCChhhcCceeeec
Confidence 23333322211 1 23345555554 45678999999999999988766321 22222 1223334 9999999
Q ss_pred cCCcc-----CCCCCeeEEEEeCCCCCCCC----------CCCCCccccHH-----HHhhhhcCCCCcCCCCh----hHH
Q 018318 241 TTHKS-----LRGPRAGMIFYRKGPKPPKK----------GQPEGAVYDFE-----DKINFAVFPSLQGGPHN----HQI 296 (358)
Q Consensus 241 s~~K~-----l~g~~gG~i~~~~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~~ 296 (358)
|.+.. .+||..||+.+.+.+.++.+ .|+..+ .+. ..++.-. .+.++ ..+
T Consensus 305 SsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~--RLALQTREQHIrRDK-----ATSNICTAQALL 377 (1001)
T KOG2040|consen 305 SSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAY--RLALQTREQHIRRDK-----ATSNICTAQALL 377 (1001)
T ss_pred cccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHH--HHHHHHHHHHhhhhc-----cchhhhHHHHHH
Confidence 99984 25778888888776544332 222211 111 1121110 11111 112
Q ss_pred HHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHhhCCceeee
Q 018318 297 GALAVALKQA-STPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (358)
Q Consensus 297 ~al~~al~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 338 (358)
|.+++.+..+ .-++++++.+|+...+..|...|++.|-++..
T Consensus 378 ANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~ 420 (1001)
T KOG2040|consen 378 ANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQH 420 (1001)
T ss_pred HHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhcc
Confidence 2233333333 23567888999999999999999988866643
No 388
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.45 E-value=0.0018 Score=58.88 Aligned_cols=206 Identities=20% Similarity=0.238 Sum_probs=114.9
Q ss_pred cccccCChHHHHH--HHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHH
Q 018318 100 NVQPYSGSPANFA--AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKA 177 (358)
Q Consensus 100 ~v~~~sGt~a~~~--~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l 177 (358)
.+.+-|||.|+-. .+.+..-|+..|+++.|+.+.|.. ....+|..+...++- ++.+..+|.+.+-+.+
T Consensus 123 tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~---------if~~ag~~~~~yrYy-d~~t~gld~~g~ledl 192 (427)
T KOG1411|consen 123 TVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN---------IFKDAGLPVKFYRYY-DPKTRGLDFKGMLEDL 192 (427)
T ss_pred EEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc---------cccccCcceeeeeec-cccccccchHHHHHHH
Confidence 3555678876544 345555678899999999876542 123455544333321 4457789998877777
Q ss_pred hhcCCcEEEEcC--CCCC-----CccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC--------Cccc-EEEec
Q 018318 178 LDFRPKLIICGG--SAYP-----RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF--------EYCH-IVTTT 241 (358)
Q Consensus 178 ~~~~~~~v~~~~--~~~~-----~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~--------~~~d-~~~~s 241 (358)
.+-...-+++.+ .+|| +....++|.++.++.+.+-+.|.| +.|+...+ ...+. ++.+ +++.|
T Consensus 193 ~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA-YQGfaSG~-~d~DA~avR~F~~~g~~~~laQS 270 (427)
T KOG1411|consen 193 GEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA-YQGFASGD-LDKDAQAVRLFVEDGHEILLAQS 270 (427)
T ss_pred hcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh-hcccccCC-chhhHHHHHHHHHcCCceEeehh
Confidence 653333333221 2344 233478999999999999999998 56654322 21111 1334 56779
Q ss_pred CCccC--CCCCeeEE--EEeCCCCCCCCCCCCCccccHHHHh----hhhcCCCCcCCCChh--HHHHHHHH---HH-Hhc
Q 018318 242 THKSL--RGPRAGMI--FYRKGPKPPKKGQPEGAVYDFEDKI----NFAVFPSLQGGPHNH--QIGALAVA---LK-QAS 307 (358)
Q Consensus 242 ~~K~l--~g~~gG~i--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~al~~a---l~-~~~ 307 (358)
+.|.| .|-+.|.+ +|++. +...++ +....|- .++|..+ .+++.... +. ++.
T Consensus 271 yAKNMGLYgERvGa~svvc~~a--------------d~A~rV~SQlk~liRpm-YSnPP~hGArIv~~Il~d~~l~~~W~ 335 (427)
T KOG1411|consen 271 YAKNMGLYGERVGALSVVCKDA--------------DEAKRVESQLKILIRPM-YSNPPLHGARIVATILSDPDLKNQWL 335 (427)
T ss_pred hhhhcchhhhccceeEEEecCH--------------HHHHHHHHHHHHHhccc-ccCCCccchhhhhhccCChHHHHHHH
Confidence 99987 46665533 45553 222222 2222222 2233322 23222111 11 111
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhCC
Q 018318 308 TPAFKAYAKQVKANAVALGNYLTGKG 333 (358)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l~~~L~~~G 333 (358)
.+...+.+|+...++.+.+.|...|
T Consensus 336 -~evk~MadRi~~mR~~L~d~L~~~g 360 (427)
T KOG1411|consen 336 -GEVKGMADRIISMRQQLFDALEKEG 360 (427)
T ss_pred -HHHHHHHHhhhhhHHHHhHHhhcCC
Confidence 2345667778888888888888765
No 389
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.37 E-value=0.0031 Score=56.30 Aligned_cols=200 Identities=20% Similarity=0.177 Sum_probs=98.4
Q ss_pred ccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHHHHHHHHhh
Q 018318 38 ASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV 117 (358)
Q Consensus 38 a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a~~~~l~a~ 117 (358)
+.-.-.+|+|.+|....+... .+..|+ ..+++-+-++...+.+=+.+ ++++++||++||.+++...
T Consensus 57 aHvghchp~VV~A~~kQmat~----~tN~RF-----lhd~lv~cA~~l~stlPeLs-----vc~F~NSGSEANDLALRLA 122 (452)
T KOG1403|consen 57 AHVGHCHPEVVRAGAKQMATI----STNNRF-----LHDELVQCARTLTSTLPELS-----VCFFVNSGSEANDLALRLA 122 (452)
T ss_pred hhcccCCHHHHHHHHHHHhHh----cccchh-----hHHHHHHHHHHHhhcCCCce-----EEEEecCCchhhHHHHHHH
Confidence 333445788988887665321 222232 22344433333333333322 5677889999999998765
Q ss_pred ---cCCCCeEEEecCCCCccccccccccCCccccc-ccce---eEEe---ecc------cCC------CCCCCCHHHHHH
Q 018318 118 ---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISA-TSIY---FESL---PYK------VNS------STGYIDYDKLEE 175 (358)
Q Consensus 118 ---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~-~g~~---~~~~---~~~------~~~------~~~~id~~~l~~ 175 (358)
.+..| |++.+-.|.+|++..+-. ++..+ .|.. .+.+ |.+ +.. +.+..=.|.+++
T Consensus 123 R~ftkhqD-vItldHAYHGHl~s~mE~---SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~ 198 (452)
T KOG1403|consen 123 RNFTKHQD-VITLDHAYHGHLQSVMEV---SPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKE 198 (452)
T ss_pred HhhcccCc-eEEEechhccceeeeeec---cceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHH
Confidence 34444 445555666665421100 00111 0100 0111 110 000 001122355666
Q ss_pred HHhhc--C-Cc--EEEEc--CCCCCCccc----hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC----cccEEEe
Q 018318 176 KALDF--R-PK--LIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCHIVTT 240 (358)
Q Consensus 176 ~l~~~--~-~~--~v~~~--~~~~~~~~~----l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~----~~d~~~~ 240 (358)
.+++. + .+ +.+.. .|-.|.+.| .+++++-.+.+|-+.|.|+.|. |+..-+...+.+. -.||++
T Consensus 199 I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fiPDIVt- 276 (452)
T KOG1403|consen 199 ICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFIPDIVT- 276 (452)
T ss_pred HHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhccccchhe-
Confidence 66542 1 11 12211 122333332 5678888899999999999984 5443343334443 246654
Q ss_pred cCCccCC-CCCeeEEEEeC
Q 018318 241 TTHKSLR-GPRAGMIFYRK 258 (358)
Q Consensus 241 s~~K~l~-g~~gG~i~~~~ 258 (358)
..|.|+ |.+-+.+++.+
T Consensus 277 -mgKpmGNGhPVa~Vattk 294 (452)
T KOG1403|consen 277 -MGKPMGNGHPVAAVATTK 294 (452)
T ss_pred -ecccCCCCCeeeEEeccH
Confidence 346664 44557777776
No 390
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.36 E-value=0.004 Score=55.86 Aligned_cols=142 Identities=15% Similarity=0.162 Sum_probs=85.9
Q ss_pred ccccCChHHHHHHHHhh--cCCCCeEEEecCCCCccccccccccCCcccccccc-eeEE-eecccCCCCCCCCHHHHHHH
Q 018318 101 VQPYSGSPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI-YFES-LPYKVNSSTGYIDYDKLEEK 176 (358)
Q Consensus 101 v~~~sGt~a~~~~l~a~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~~~~~~~id~~~l~~~ 176 (358)
|...|||.|+..+..-+ +-+...|.+..|+...|... ....|. .+.. ..+ +.++..+|++.+...
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~i---------f~~aGf~tv~~Y~yW--d~~~k~~d~e~~Lsd 171 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAI---------FEKAGFTTVATYPYW--DAENKCVDLEGFLSD 171 (410)
T ss_pred eeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHH---------HHHcCCceeeeeeee--cCCCceecHHHHHHH
Confidence 66778998888764333 44566788888887765421 123441 1222 223 335678999999988
Q ss_pred HhhcCCcEEEE-cC-CCCCC-----ccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCC------C-ccc-EEEec
Q 018318 177 ALDFRPKLIIC-GG-SAYPR-----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF------E-YCH-IVTTT 241 (358)
Q Consensus 177 l~~~~~~~v~~-~~-~~~~~-----~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~------~-~~d-~~~~s 241 (358)
|+....+.|++ +. .+||+ ......|++..++.+...+.|.| +-|+..++.-.... + +.. +++.|
T Consensus 172 l~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~DawAiR~fV~~g~e~fv~QS 250 (410)
T KOG1412|consen 172 LESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDADAWAIRYFVEQGFELFVCQS 250 (410)
T ss_pred HhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh-hcccccCCccccHHHHHHHHhcCCeEEEEhh
Confidence 87644444433 21 23442 22356888889999999999998 66765432111111 1 332 67889
Q ss_pred CCccC--CCCCeeEE
Q 018318 242 THKSL--RGPRAGMI 254 (358)
Q Consensus 242 ~~K~l--~g~~gG~i 254 (358)
+.|.| .+.|-|-+
T Consensus 251 FaKNfGlYneRvGnl 265 (410)
T KOG1412|consen 251 FAKNFGLYNERVGNL 265 (410)
T ss_pred hhhhcccccccccce
Confidence 99986 46775533
No 391
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.96 E-value=0.0032 Score=55.21 Aligned_cols=89 Identities=16% Similarity=0.179 Sum_probs=61.6
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCC---C-C-CccchHHHHHHHHHhCCEEEEechhhhhhhhccccC-----CCCCcc
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSA---Y-P-RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA-----NPFEYC 235 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~---~-~-~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~-----~~~~~~ 235 (358)
-.-|++.+++.+++..+..+.+-++. + | .+..+++|+.+|..|+++-+|..+. |+-...... .....+
T Consensus 139 l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnay--glqsee~i~~iaa~~~~gri 216 (432)
T KOG3843|consen 139 LITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY--GLQSEECIHKIAAAAECGRI 216 (432)
T ss_pred HHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccc--ccchHHHHHHHHHHhhhccH
Confidence 35689999999988777755332222 2 2 3567999999999999999999873 332211110 011267
Q ss_pred cEEEecCCccCCCCCeeEEEE
Q 018318 236 HIVTTTTHKSLRGPRAGMIFY 256 (358)
Q Consensus 236 d~~~~s~~K~l~g~~gG~i~~ 256 (358)
|.++.|+.|.|.-|-||.++.
T Consensus 217 da~vqsldknf~vpvggaiia 237 (432)
T KOG3843|consen 217 DAFVQSLDKNFMVPVGGAIIA 237 (432)
T ss_pred HHHHHHhhhcceeecchhHhh
Confidence 999999999998888876654
No 392
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.95 E-value=0.013 Score=51.98 Aligned_cols=273 Identities=15% Similarity=0.112 Sum_probs=140.4
Q ss_pred cceeEeccCCCCCHHHHHHHhcccccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHHhcCCCCCCCCccccccCChHH
Q 018318 32 RGIELIASENFTSFAVIEALGSALTNKYSEGMP--GNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA 109 (358)
Q Consensus 32 ~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~--~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt~a 109 (358)
+.+++-|++..+|..|+..+.+.+.+..+.|.. ...++ +.++...++ .+...+.+++++++..- +.+...+||.-
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHR-sk~f~kii~-~tes~lreLlniPdn~~-vlf~QGGGt~q 83 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHR-SKDFAKIIN-DTESLLRELLNIPDNYK-VLFLQGGGTGQ 83 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEeccc-chhHHHHHH-HHHHHHHHHHcCCCcee-EEEEeCCCccc
Confidence 467777899999999999998888765544421 11122 234554554 56678999999987421 22233455643
Q ss_pred HHHHHHhh--cCCCC---eEEEecCCCCccccccccccCCcccccccceeEEeecccCCCC--CCCCHHHHHHHHhhcCC
Q 018318 110 NFAAYTAV--LEPHD---RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSST--GYIDYDKLEEKALDFRP 182 (358)
Q Consensus 110 ~~~~l~a~--~~~gd---~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~id~~~l~~~l~~~~~ 182 (358)
..++...+ ++.|+ -|++-+ . +.-.+ ..+...|. ...+..+..+-+ ..+|.+.++... +.
T Consensus 84 FaAv~lNL~glK~g~~AdYiVTGs-----W-S~KA~----~EAkk~~~-~~~V~~~~k~y~ygkvPd~~~w~~~~---da 149 (370)
T KOG2790|consen 84 FAAVPLNLIGLKHGRCADYVVTGS-----W-SAKAA----EEAKKYGT-PNIVIPKLKSYTYGKVPDPSTWELNP---DA 149 (370)
T ss_pred ccccchhhhccccCCccceEEecc-----c-cHHHH----HHHHhhCC-ceEEeccccccccCcCCChhhcccCC---Cc
Confidence 33333444 35564 333311 1 00000 00111221 112222221112 235655544321 23
Q ss_pred cEEEEcCCC--CCCccc-hHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCCccCCCCCe-eEEEEeC
Q 018318 183 KLIICGGSA--YPRDWD-YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRK 258 (358)
Q Consensus 183 ~~v~~~~~~--~~~~~~-l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g-G~i~~~~ 258 (358)
+.|..|... .|...+ +. +-.-+|+++|+|-+ +-+.. .+.++...++++...+|++ ||-| ..++.++
T Consensus 150 ~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDmS--SnflS---rpvDvsk~gvi~aGAQKN~-G~aG~Tvvivr~ 219 (370)
T KOG2790|consen 150 SYVYYCANETVHGVEFDFIP----VNDPKGAVLVADMS--SNFLS---RPVDVSKFGVIFAGAQKNV-GPAGVTVVIVRK 219 (370)
T ss_pred cEEEEecCceeeceecCCCC----CCCCCCceEEEecc--cchhc---CCccchhcceEEecccccc-CccccEEEEEeh
Confidence 567655433 232211 11 11236899999996 33332 1233446678889999986 6777 6666677
Q ss_pred CCCCC-CCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHhhC-Cce
Q 018318 259 GPKPP-KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGK-GYS 335 (358)
Q Consensus 259 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-G~~ 335 (358)
++... ....+.+. ++....+. ..+..+|....+..+...++.++..+ +.+..+...+.++.+.+.+.+. ||-
T Consensus 220 dllg~~~~~tP~v~--dyk~~~~N---nSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy 294 (370)
T KOG2790|consen 220 DLLGNALDITPSVL--DYKIMDKN---NSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFY 294 (370)
T ss_pred hhhcccccCCcccc--ceeeeccc---cccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeE
Confidence 54321 11122111 11111111 11123444444555666777666544 4666677778889999999876 763
Q ss_pred e
Q 018318 336 L 336 (358)
Q Consensus 336 ~ 336 (358)
.
T Consensus 295 ~ 295 (370)
T KOG2790|consen 295 R 295 (370)
T ss_pred E
Confidence 3
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.76 E-value=0.0036 Score=51.44 Aligned_cols=52 Identities=12% Similarity=0.066 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhcC--C--CCCCCCccccccCCh-HHHHHHHHhhcCCCCeEEEecCCCC
Q 018318 77 EIENLCRSRALQTFH--L--DPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSG 132 (358)
Q Consensus 77 ~le~~~~~~la~~~g--~--~~~~~~~~v~~~sGt-~a~~~~l~a~~~~gd~Vl~~~~~~~ 132 (358)
+|.+.+.+++.+.+| . +++ .|+.++|+ .|+..++.++++|||.|+++.|.|+
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~pd----~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFDAD----MIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccchh----heEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 455666788988877 3 333 35556664 6999999999999999999998765
No 394
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.17 E-value=0.042 Score=50.36 Aligned_cols=139 Identities=18% Similarity=0.225 Sum_probs=73.2
Q ss_pred CCHHHHHHHHhhcC----C-cEEEEcC--CCCC----CccchHHHHHHHHHhCCEEEEechhhhhhhhcccc----CCCC
Q 018318 168 IDYDKLEEKALDFR----P-KLIICGG--SAYP----RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA----ANPF 232 (358)
Q Consensus 168 id~~~l~~~l~~~~----~-~~v~~~~--~~~~----~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~----~~~~ 232 (358)
-.++++|++|.+.+ | ..+|+.. +..| .+.=...|.++|++||+.+++|+.|..| ...|.+ .+.+
T Consensus 253 ~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGg-GaTGk~WaHehw~l 331 (484)
T KOG1405|consen 253 GCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGG-GATGKFWAHEHWNL 331 (484)
T ss_pred hHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCC-CccCceeeehhcCC
Confidence 35677888887643 2 3445542 3333 2222789999999999999999998643 222322 1233
Q ss_pred C-cccEEEecCCccCCCCCeeEEEEeCCCCCCCCCCCCCccccHHHHhhhhcCCCCcCCCChhHHHHHHHHHHHhccHHH
Q 018318 233 E-YCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF 311 (358)
Q Consensus 233 ~-~~d~~~~s~~K~l~g~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~~~ 311 (358)
+ -.|+++|| |-|. .|||+.- .+ ++..-..+.|....|-|.-. .-+...+.++.++
T Consensus 332 ~~PpD~vTFS--KK~q--~gGffh~-~~---------------frpn~pYrifNTWmGdP~k~--lll~~vv~~I~~~-- 387 (484)
T KOG1405|consen 332 DSPPDVVTFS--KKFQ--TGGFFHD-EE---------------FRPNEPYRIFNTWMGDPSKN--LLLEEVVQEIKRE-- 387 (484)
T ss_pred CCCccceehh--hhhh--cCccccC-cc---------------cCCCchHHHhhhhcCChHHH--HHHHHHHHHHhHH--
Confidence 3 56877664 4342 3454332 22 11111122344444544322 2234445554432
Q ss_pred HHHHHHHHHHHHHHHHHHhhC
Q 018318 312 KAYAKQVKANAVALGNYLTGK 332 (358)
Q Consensus 312 ~~~~~~~~~~~~~l~~~L~~~ 332 (358)
...++..+.-+.|.+.|.++
T Consensus 388 -~Ll~n~~~vG~~l~~gL~~L 407 (484)
T KOG1405|consen 388 -DLLNNVAHVGKALLKGLLEL 407 (484)
T ss_pred -HHHHHHHHHHHHHHHHHHHH
Confidence 34555555666677666553
No 395
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=79.58 E-value=9 Score=32.43 Aligned_cols=71 Identities=14% Similarity=0.135 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCc
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHK 244 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K 244 (358)
++.+++++++++. ...+|.++.+.-+.+.+++++.+-.|+...+++-|.+-.-.... ..+ |+|++..+++=
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~------A~~~G~D~I~TTLsG 122 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAIN------AAELGFDIIGTTLSG 122 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHH------HHHTT-SEEE-TTTT
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHH------HHHcCCCEEEccccc
Confidence 5778999998864 78889898887766678999999999988999999974322111 012 89999988765
No 396
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=77.20 E-value=9.1 Score=32.79 Aligned_cols=71 Identities=18% Similarity=0.162 Sum_probs=51.2
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCcc-chHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-cccEEEecCCc
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDW-DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHK 244 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~-~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~-~~d~~~~s~~K 244 (358)
+..+++++++++. ...+|.++.+.-..+. +++++.+-.|..|.+++.|++..-... ...+ |+||+-++++-
T Consensus 85 TptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l------~a~~~G~D~IGTTLsG 157 (229)
T COG3010 85 TPTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGL------NAHKLGFDIIGTTLSG 157 (229)
T ss_pred cccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHHHH------HHHHcCCcEEeccccc
Confidence 3557888888764 7788888877766655 899999998888999999997332111 1112 88998887764
No 397
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=75.61 E-value=9.2 Score=36.24 Aligned_cols=63 Identities=17% Similarity=0.073 Sum_probs=41.2
Q ss_pred eEEeecccCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEec
Q 018318 154 FESLPYKVNSSTGYIDYDKLEEKALD--FRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 154 ~~~~~~~~~~~~~~id~~~l~~~l~~--~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~ 216 (358)
-+..++|+.+.....+...+-+.++. ...++|+++--.-|...+++.+.++|++.|+++++|-
T Consensus 114 QQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 114 QQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred ceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHcCCcEEECC
Confidence 35667765432223444455444443 1346777665555556679999999999999999997
No 398
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=69.32 E-value=21 Score=27.49 Aligned_cols=43 Identities=12% Similarity=-0.028 Sum_probs=32.6
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhC
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG 209 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g 209 (358)
.+.++++.+.+.+.+|.+|.++.+.......+.++.+.+++.+
T Consensus 36 ~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 36 DVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAG 78 (119)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcC
Confidence 4678888888888889998888665555566788888887763
No 399
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=67.96 E-value=83 Score=29.44 Aligned_cols=153 Identities=18% Similarity=0.115 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCccccccCCh-HHHHHHHHhhcC----CC--CeEEEecCCCCccccccccccCCcccc
Q 018318 76 DEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLE----PH--DRIMGLDLPSGGHLTHGYYTSGGKKIS 148 (358)
Q Consensus 76 ~~le~~~~~~la~~~g~~~~~~~~~v~~~sGt-~a~~~~l~a~~~----~g--d~Vl~~~~~~~~~~~~~~~~~~~~~~~ 148 (358)
.+||+.+| +|-++.|=...+ |-.|++.+|+ +.+++++.++.. .+ -+|+...|-|+.+... +.. .
T Consensus 46 ~eL~~~Ir-~LH~~VGNAvt~-gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~q---t~~---f- 116 (363)
T PF04864_consen 46 PELERQIR-RLHRVVGNAVTD-GRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQ---TDF---F- 116 (363)
T ss_dssp HHHHHHHH-HHHHHH-SB--T-TSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHH---CCC---T-
T ss_pred HHHHHHHH-HHHHHhcccccc-CcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHH---HHh---c-
Confidence 47886664 466667733211 1346677774 678888877732 12 2577777776654321 111 0
Q ss_pred cccceeEEeecccCCCCCCCCHHHHHHHHhhcCCcEE-EEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccc
Q 018318 149 ATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI-ICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQE 227 (358)
Q Consensus 149 ~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v-~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~ 227 (358)
....+ .+.-|...+. + .+.....| +++.||||- ..+.+ .+++..+..+|.|-|.+=.+
T Consensus 117 -~s~~y---~w~Gda~~~~-~--------~~~~~~~IElVTSPNNPD-G~lr~--~V~~g~~~k~I~D~AYYWPh----- 175 (363)
T PF04864_consen 117 -DSRLY---KWAGDASNFK-N--------SDNPSPYIELVTSPNNPD-GQLRE--AVLNGSSGKVIHDLAYYWPH----- 175 (363)
T ss_dssp --BTTE---EEEEECCCGT-T---------S-CCGEEEEEESS-TTT---------SSTTTEEEEEEE-TT-STT-----
T ss_pred -cccCc---cccccHHhhc-c--------CCCCCCeEEEEeCCCCCc-ccccc--hhcCCCCcceeeeeeeeccc-----
Confidence 11111 1111111111 1 01122344 567788883 11221 12355567789999844221
Q ss_pred cCCCCC---cccEEEecCCccC--CCCCeeEEEEeCC
Q 018318 228 AANPFE---YCHIVTTTTHKSL--RGPRAGMIFYRKG 259 (358)
Q Consensus 228 ~~~~~~---~~d~~~~s~~K~l--~g~~gG~i~~~~~ 259 (358)
+ .|.. +-|++.||++|.= +|.|-|+.+.+++
T Consensus 176 y-TpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~ 211 (363)
T PF04864_consen 176 Y-TPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDE 211 (363)
T ss_dssp T-S---S-B--SEEEEEHHHHCS-GGG-EEEEEES-H
T ss_pred c-cccCCCCCCceEEEEEecccCccccccceeeecCH
Confidence 1 1222 5589999999952 3566799999886
No 400
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=67.03 E-value=16 Score=27.83 Aligned_cols=49 Identities=18% Similarity=0.106 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEec
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~ 216 (358)
.++++++++.+++ +|..++++.-..|...-.++-.+++++.+|-+++--
T Consensus 48 kl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~p 96 (121)
T COG1504 48 KLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIELP 96 (121)
T ss_pred ccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEeC
Confidence 6999999999986 888888887666754445678889999997776643
No 401
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=65.21 E-value=92 Score=30.59 Aligned_cols=92 Identities=15% Similarity=0.155 Sum_probs=54.0
Q ss_pred CCCCHHHHHHHHhhc----C-CcEEE--EcCCCCCCccchHHHHHHHHHhC-CEEEEechhhhhhhhccccCCCC-C---
Q 018318 166 GYIDYDKLEEKALDF----R-PKLII--CGGSAYPRDWDYARFRAVADKCG-ALLLCDMAHISGLVAAQEAANPF-E--- 233 (358)
Q Consensus 166 ~~id~~~l~~~l~~~----~-~~~v~--~~~~~~~~~~~l~~i~~la~~~g-~~lvvD~a~~~g~~~~~~~~~~~-~--- 233 (358)
|.+|.--+++.|++. + |-+++ ++.+-.|...-+-+|.++|++|. .|++.-. |+....... .++.. .
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasG-haiAALt~a-epnnil~HV~ 349 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASG-HAIAALTCA-EPNNILGHVE 349 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeecc-chhhheeec-CcccchhHHH
Confidence 589988888888653 2 33333 24455666666889999999997 7887654 232211111 11211 1
Q ss_pred -cccEEEecCCccCCCCCeeEEEEeCC
Q 018318 234 -YCHIVTTTTHKSLRGPRAGMIFYRKG 259 (358)
Q Consensus 234 -~~d~~~~s~~K~l~g~~gG~i~~~~~ 259 (358)
..|.+.....-|++-|..-++...+.
T Consensus 350 eqldSMal~ialWLGiPSaPiV~LHRP 376 (838)
T KOG0630|consen 350 EQLDSMALNIALWLGIPSAPIVLLHRP 376 (838)
T ss_pred HHHhhccchhHHHhCCCCCceEEeecc
Confidence 45666666666776555555555554
No 402
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=63.38 E-value=12 Score=28.73 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHh--CCEEEEechhh
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKC--GALLLCDMAHI 219 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~--g~~lvvD~a~~ 219 (358)
..+.+++.+.+.+.+|++|.++.+..+......++++..|+. ++.+++=+.|.
T Consensus 37 ~~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 37 NVPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp SB-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 355688988888889999887754444444567777777776 78898877664
No 403
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=61.32 E-value=20 Score=33.70 Aligned_cols=56 Identities=18% Similarity=0.251 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHhhc----CCcEEEEcC------CCCC-CccchHHHHHHHHHhCCEEEEechhhhhh
Q 018318 167 YIDYDKLEEKALDF----RPKLIICGG------SAYP-RDWDYARFRAVADKCGALLLCDMAHISGL 222 (358)
Q Consensus 167 ~id~~~l~~~l~~~----~~~~v~~~~------~~~~-~~~~l~~i~~la~~~g~~lvvD~a~~~g~ 222 (358)
..+++++..+++.- +.+++++.- +.++ ...|+..|..+-+.+++++++|.+|+.|.
T Consensus 218 ~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 218 AATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 45888877766532 345555421 1233 45689999999878899999999999874
No 404
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=59.28 E-value=45 Score=26.68 Aligned_cols=51 Identities=16% Similarity=0.218 Sum_probs=35.8
Q ss_pred eEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhC
Q 018318 154 FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG 209 (358)
Q Consensus 154 ~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g 209 (358)
++++.+.. .+.++++.+++.+++|++|.++.........++++.+.+++.+
T Consensus 32 ~eVi~LG~-----~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~ 82 (137)
T PRK02261 32 FEVINLGV-----MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAG 82 (137)
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcC
Confidence 45555532 4778888888888889988887665555556777777777663
No 405
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=58.42 E-value=32 Score=30.70 Aligned_cols=58 Identities=17% Similarity=0.334 Sum_probs=40.6
Q ss_pred CC-CCCHHHHHHHHhhc----CCcEEEE--cCCCCCC----ccchHHHHHHHHHhCCEEEEechhhhhh
Q 018318 165 TG-YIDYDKLEEKALDF----RPKLIIC--GGSAYPR----DWDYARFRAVADKCGALLLCDMAHISGL 222 (358)
Q Consensus 165 ~~-~id~~~l~~~l~~~----~~~~v~~--~~~~~~~----~~~l~~i~~la~~~g~~lvvD~a~~~g~ 222 (358)
+| ..++++++.+++.. ..+++++ |.+.++. ..|+..|..+.+..+++|++|.+|+.|.
T Consensus 129 ~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 129 RGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 44 68888887766542 2456655 3344442 4578888888888999999999998763
No 406
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=58.17 E-value=39 Score=26.25 Aligned_cols=48 Identities=8% Similarity=-0.037 Sum_probs=33.7
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHh---CCEEEE
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKC---GALLLC 214 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~---g~~lvv 214 (358)
...++++-+.+.+.+|.+|+++.+.......++++.+..++. ++.+++
T Consensus 36 ~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~ 86 (122)
T cd02071 36 RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVG 86 (122)
T ss_pred CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 467788877777778999988866554555677877777776 344444
No 407
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=55.63 E-value=30 Score=32.72 Aligned_cols=57 Identities=18% Similarity=0.356 Sum_probs=41.4
Q ss_pred CCC-CCHHHHHHHHhhc----CCcEEEE--cCCCCCC----ccchHHHHHHHHHhCCEEEEechhhhh
Q 018318 165 TGY-IDYDKLEEKALDF----RPKLIIC--GGSAYPR----DWDYARFRAVADKCGALLLCDMAHISG 221 (358)
Q Consensus 165 ~~~-id~~~l~~~l~~~----~~~~v~~--~~~~~~~----~~~l~~i~~la~~~g~~lvvD~a~~~g 221 (358)
+|. .++++++.+++.. .++++++ |.+.++. ..++..|..+-+.+++++++|..|+.|
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 454 6888887776542 2466665 4455442 358999999988899999999999877
No 408
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=55.60 E-value=51 Score=25.57 Aligned_cols=50 Identities=16% Similarity=0.028 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
.+++++++++++. .|.+|+++.-..+....-+++.+.+++.|+-+.+-.+
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcCh
Confidence 5899999999975 7898888865554322235777788889988887554
No 409
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=54.91 E-value=44 Score=30.78 Aligned_cols=54 Identities=20% Similarity=0.241 Sum_probs=36.7
Q ss_pred CCCCCHHHHHHHHhhc-----CCcEEEEcCCCCC--CccchHHHHHHHHHhCCEEEEechh
Q 018318 165 TGYIDYDKLEEKALDF-----RPKLIICGGSAYP--RDWDYARFRAVADKCGALLLCDMAH 218 (358)
Q Consensus 165 ~~~id~~~l~~~l~~~-----~~~~v~~~~~~~~--~~~~l~~i~~la~~~g~~lvvD~a~ 218 (358)
...++.+++++.++.. .-.+|+++.|.-+ ......+|.++|++.|+.+++|.+.
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 4467777777765432 1245666654322 2335789999999999999999974
No 410
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=53.78 E-value=43 Score=29.23 Aligned_cols=48 Identities=8% Similarity=0.099 Sum_probs=30.8
Q ss_pred CCCHHHHHHHHhh----cCCcEEEEcCCCC---CC--ccc-------hHHHHHHHHHhCCEEEE
Q 018318 167 YIDYDKLEEKALD----FRPKLIICGGSAY---PR--DWD-------YARFRAVADKCGALLLC 214 (358)
Q Consensus 167 ~id~~~l~~~l~~----~~~~~v~~~~~~~---~~--~~~-------l~~i~~la~~~g~~lvv 214 (358)
.++++++++.++. +++++|+++.-.. +. ... +..|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 4677777766543 4688888774221 11 111 45788889999988776
No 411
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=53.22 E-value=42 Score=30.12 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=40.6
Q ss_pred CCC-CCHHHHHHHHhhc----CCcEEEE--cCCCC-CC---ccchHHHHHHHHHhCCEEEEechhhhh
Q 018318 165 TGY-IDYDKLEEKALDF----RPKLIIC--GGSAY-PR---DWDYARFRAVADKCGALLLCDMAHISG 221 (358)
Q Consensus 165 ~~~-id~~~l~~~l~~~----~~~~v~~--~~~~~-~~---~~~l~~i~~la~~~g~~lvvD~a~~~g 221 (358)
+|. .++++++.+++.. ..+++++ +.+.+ +. ..++..|..+.+.+++++++|..|+.|
T Consensus 139 ~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 139 RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 443 4888887776542 2355554 24455 52 568999999998899999999999876
No 412
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=50.84 E-value=53 Score=26.01 Aligned_cols=52 Identities=15% Similarity=0.224 Sum_probs=36.0
Q ss_pred eEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCC
Q 018318 154 FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGA 210 (358)
Q Consensus 154 ~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~ 210 (358)
++++.+.. ...++.+-++..++++.+|.++.-.......++++.+.+++.|.
T Consensus 28 feVidLG~-----~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 28 FNVVNLGV-----LSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCC
Confidence 45665543 46778887777777898887765544555567888888888753
No 413
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=49.04 E-value=24 Score=26.73 Aligned_cols=50 Identities=8% Similarity=0.003 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEec
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~ 216 (358)
..++.+++++++..-..++.+.....+......+++++|+++|+.+..=.
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~ 53 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHS 53 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecC
Confidence 46788899999865567777776666666678999999999999988766
No 414
>smart00642 Aamy Alpha-amylase domain.
Probab=47.42 E-value=19 Score=29.89 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=23.2
Q ss_pred CCCCccchHHHHHHHHHhCCEEEEech
Q 018318 191 AYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 191 ~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
.+|+..+++++.+-||++|+.+++|..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345567899999999999999999986
No 415
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=46.31 E-value=63 Score=25.79 Aligned_cols=52 Identities=15% Similarity=0.232 Sum_probs=35.7
Q ss_pred eEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCC
Q 018318 154 FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGA 210 (358)
Q Consensus 154 ~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~ 210 (358)
++++.+.. ...++++-++..++++.+|.++.-.......++++.+.+++.|.
T Consensus 30 feVi~LG~-----~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 30 FNVVNLGV-----LSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 45665543 47788887777777888887765444444567888888888763
No 416
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=45.45 E-value=81 Score=25.01 Aligned_cols=52 Identities=13% Similarity=0.012 Sum_probs=34.0
Q ss_pred eeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhC
Q 018318 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG 209 (358)
Q Consensus 153 ~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g 209 (358)
+++++... ...+++.+-++..++++.+|.+|.....+..-++++.+..++.+
T Consensus 30 GfeVi~lg-----~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 30 GFDVDVGP-----LFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG 81 (132)
T ss_pred CcEEEECC-----CCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC
Confidence 35555543 24677777666666788888888655444445778887777764
No 417
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=45.04 E-value=72 Score=27.25 Aligned_cols=58 Identities=9% Similarity=0.105 Sum_probs=40.5
Q ss_pred eEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhC----CEEEEec
Q 018318 154 FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG----ALLLCDM 216 (358)
Q Consensus 154 ~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g----~~lvvD~ 216 (358)
++++.+. -.+.++++.+.+.+++|.+|.++.+.......+.++.+..++.+ +.+++=+
T Consensus 111 ~~vi~lG-----~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG 172 (201)
T cd02070 111 FEVIDLG-----RDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGG 172 (201)
T ss_pred CEEEECC-----CCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEEC
Confidence 4555543 25778999999988899998887666555556778777777764 4565533
No 418
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=42.87 E-value=93 Score=26.53 Aligned_cols=59 Identities=10% Similarity=0.107 Sum_probs=42.8
Q ss_pred eeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhC----CEEEEec
Q 018318 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG----ALLLCDM 216 (358)
Q Consensus 153 ~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g----~~lvvD~ 216 (358)
+++++.+. ..+.++++-+.+++.+|.+|.++.+.......++++.+.+++.+ +.+++=+
T Consensus 112 G~~vi~LG-----~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG 174 (197)
T TIGR02370 112 GFDVIDLG-----RDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGG 174 (197)
T ss_pred CcEEEECC-----CCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 35666653 25778999999988899999888776665566788888888774 4565543
No 419
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=42.43 E-value=1e+02 Score=20.67 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=31.1
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEE
Q 018318 165 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLC 214 (358)
Q Consensus 165 ~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvv 214 (358)
++...++++-+..++.+-+.+.++..++ .....++.+.++++|+.++.
T Consensus 12 ~~~~~~~~~~~~a~~~g~~~v~iTDh~~--~~~~~~~~~~~~~~gi~~i~ 59 (67)
T smart00481 12 DGALSPEELVKRAKELGLKAIAITDHGN--LFGAVEFYKAAKKAGIKPII 59 (67)
T ss_pred cccCCHHHHHHHHHHcCCCEEEEeeCCc--ccCHHHHHHHHHHcCCeEEE
Confidence 3567788887777766777775543322 23345777888888877653
No 420
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=42.20 E-value=81 Score=27.32 Aligned_cols=57 Identities=19% Similarity=0.234 Sum_probs=40.5
Q ss_pred eeEEeecccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhC--CEEEE
Q 018318 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG--ALLLC 214 (358)
Q Consensus 153 ~~~~~~~~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g--~~lvv 214 (358)
+++++.+.. .+.++++-+.+.+++|.+|.++.........++++.+..++.+ +.+++
T Consensus 116 G~~Vi~LG~-----~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~v 174 (213)
T cd02069 116 GYEVIDLGV-----MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLI 174 (213)
T ss_pred CCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEE
Confidence 356666543 5788999999988899999888666665566777777777664 44444
No 421
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=40.07 E-value=63 Score=28.80 Aligned_cols=22 Identities=23% Similarity=0.205 Sum_probs=17.0
Q ss_pred chHHHHHHHHHhCCEEEEechh
Q 018318 197 DYARFRAVADKCGALLLCDMAH 218 (358)
Q Consensus 197 ~l~~i~~la~~~g~~lvvD~a~ 218 (358)
+.+.+.++++++++-+|+|++|
T Consensus 53 ~~~~l~~~l~~~~i~~VIDATH 74 (248)
T PRK08057 53 GAEGLAAYLREEGIDLVIDATH 74 (248)
T ss_pred CHHHHHHHHHHCCCCEEEECCC
Confidence 5577788888888888888876
No 422
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=39.79 E-value=1.2e+02 Score=23.01 Aligned_cols=50 Identities=18% Similarity=0.085 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
.+++++++..+...+|.+|+++.-..... +-+++.+..+++|+-+-+-.+
T Consensus 38 ~l~~~~l~~~~~~~~peiliiGTG~~~~~-~~~~~~~~l~~~gI~vE~m~T 87 (109)
T cd00248 38 DLDPEALLPLLAEDRPDILLIGTGAEIAF-LPRALRAALRAAGIGVEVMST 87 (109)
T ss_pred cCCHHHHHHHHhhCCCCEEEEcCCCCCCc-CCHHHHHHHHHcCCeEEEeCc
Confidence 69999999988753388888886555533 346788888999987766554
No 423
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=38.99 E-value=1.4e+02 Score=22.78 Aligned_cols=49 Identities=14% Similarity=-0.025 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
.++.++++.++.. +|.+++++.-...... -+++.+.++++|+-+-+-.+
T Consensus 39 ~l~~e~l~~l~~~-~peiliiGTG~~~~~~-~~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 39 DLTAAHFEALLAL-QPEVILLGTGERQRFP-PPALLAPLLARGIGVEVMDT 87 (109)
T ss_pred cCCHHHHHHHHhc-CCCEEEEecCCCCCcC-CHHHHHHHHHcCCeEEEECH
Confidence 6899999998875 6898888765554332 36788888899987766554
No 424
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=38.65 E-value=21 Score=32.16 Aligned_cols=28 Identities=18% Similarity=0.268 Sum_probs=24.9
Q ss_pred CCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 190 SAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 190 ~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
+.+|+..+++++.+.||++|+.||+|-+
T Consensus 46 ~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 46 PRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccchhhhhhhhhhccccccceEEEeee
Confidence 5667677899999999999999999996
No 425
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=37.66 E-value=29 Score=30.94 Aligned_cols=42 Identities=19% Similarity=0.206 Sum_probs=30.4
Q ss_pred CCC-CHHHHHHHHhhcCCcEEEEcCCCCCCccchH-----HHHHHHHHhCCEEE
Q 018318 166 GYI-DYDKLEEKALDFRPKLIICGGSAYPRDWDYA-----RFRAVADKCGALLL 213 (358)
Q Consensus 166 ~~i-d~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~-----~i~~la~~~g~~lv 213 (358)
|.+ |.+.+++.|++++.++|+ +.+ .|.+ .+.+.|++.|+.++
T Consensus 50 G~lg~~~~l~~~l~~~~i~~vI-DAT-----HPfA~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGIDAVI-DAT-----HPFAAEISQNAIEACRELGIPYL 97 (249)
T ss_pred CCCCCHHHHHHHHHhCCCcEEE-ECC-----CchHHHHHHHHHHHHhhcCcceE
Confidence 456 889999999887777654 655 5865 45577787787665
No 426
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=37.14 E-value=29 Score=34.20 Aligned_cols=28 Identities=11% Similarity=0.136 Sum_probs=25.9
Q ss_pred CCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 190 SAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 190 ~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
+.+|+..++++|.+-||++|+.||+|.+
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 6788888999999999999999999997
No 427
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=37.12 E-value=47 Score=30.94 Aligned_cols=90 Identities=17% Similarity=0.229 Sum_probs=57.0
Q ss_pred CCCCCHHHHHHHHhh---cC-C--cEEEE-cCCCCCC---ccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCC-
Q 018318 165 TGYIDYDKLEEKALD---FR-P--KLIIC-GGSAYPR---DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE- 233 (358)
Q Consensus 165 ~~~id~~~l~~~l~~---~~-~--~~v~~-~~~~~~~---~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~- 233 (358)
+|.-++++++.+++. .. + +++++ |.+.+|. ..+|..|..+.+++++.+.. ..|..|....- ..+.
T Consensus 140 tGmatl~Ei~~Av~~i~~~G~~~~~i~llhC~s~YP~~~~~~nL~~I~~Lk~~f~~pVG~-SdHt~G~~~~~---aAval 215 (329)
T TIGR03569 140 TGMATLEEIEAAVGVLRDAGTPDSNITLLHCTTEYPAPFEDVNLNAMDTLKEAFDLPVGY-SDHTLGIEAPI---AAVAL 215 (329)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCcCcEEEEEECCCCCCCcccCCHHHHHHHHHHhCCCEEE-CCCCccHHHHH---HHHHc
Confidence 455688888776643 22 2 25443 7777774 45799999999999988876 46887743210 0112
Q ss_pred cccEE--EecCCccCCCCCeeEEEEeC
Q 018318 234 YCHIV--TTTTHKSLRGPRAGMIFYRK 258 (358)
Q Consensus 234 ~~d~~--~~s~~K~l~g~~gG~i~~~~ 258 (358)
|++++ -+++.|.+.||...+-+.++
T Consensus 216 GA~iIEkH~tldk~~~G~D~~~Sl~p~ 242 (329)
T TIGR03569 216 GATVIEKHFTLDKNLPGPDHKASLEPD 242 (329)
T ss_pred CCCEEEeCCChhhcCCCCChhhcCCHH
Confidence 78865 46788988887654444444
No 428
>TIGR03586 PseI pseudaminic acid synthase.
Probab=36.19 E-value=1.1e+02 Score=28.57 Aligned_cols=89 Identities=19% Similarity=0.291 Sum_probs=56.0
Q ss_pred CCCCCHHHHHHHHhhc----CCcEEEE-cCCCCCC---ccchHHHHHHHHHhCCEE-EEechhhhhhhhccccCCCCC-c
Q 018318 165 TGYIDYDKLEEKALDF----RPKLIIC-GGSAYPR---DWDYARFRAVADKCGALL-LCDMAHISGLVAAQEAANPFE-Y 234 (358)
Q Consensus 165 ~~~id~~~l~~~l~~~----~~~~v~~-~~~~~~~---~~~l~~i~~la~~~g~~l-vvD~a~~~g~~~~~~~~~~~~-~ 234 (358)
+|.-++++++.+++.. .++++++ |.+.+|. ..+|..|..+.+++++.+ ++| |..|....- -.+. |
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~~~~~---aAva~G 215 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGILAPV---AAVALG 215 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCchHHHH---HHHHcC
Confidence 4556888887766432 2355443 6677774 457899999999999999 888 887742210 0112 7
Q ss_pred ccEE--EecCCccCCCCCeeEEEEeC
Q 018318 235 CHIV--TTTTHKSLRGPRAGMIFYRK 258 (358)
Q Consensus 235 ~d~~--~~s~~K~l~g~~gG~i~~~~ 258 (358)
++++ -+++.|.+.||..-.-+.++
T Consensus 216 A~iIEkH~tld~~l~G~D~~~Sl~p~ 241 (327)
T TIGR03586 216 ACVIEKHFTLDRSDGGVDSAFSLEPD 241 (327)
T ss_pred CCEEEeCCChhhcCCCCChhccCCHH
Confidence 7765 46777888777654333333
No 429
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=36.09 E-value=84 Score=31.14 Aligned_cols=54 Identities=19% Similarity=0.202 Sum_probs=39.5
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHh--CCEEEEechhhh
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKC--GALLLCDMAHIS 220 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~--g~~lvvD~a~~~ 220 (358)
..++.+++.+.+.+.+|.+|.++.. ++......++++.+|+. ++.+|+=+.|+.
T Consensus 48 ~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 48 GPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred cCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 3567788888888778998877532 33334566888888887 899998877754
No 430
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=36.01 E-value=1.1e+02 Score=22.32 Aligned_cols=46 Identities=11% Similarity=0.096 Sum_probs=31.3
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHH-HHHHHHHhCCEEEEech
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYAR-FRAVADKCGALLLCDMA 217 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~-i~~la~~~g~~lvvD~a 217 (358)
..++.+.++..+.++|++.....+ ..... |..+|++++++++.=..
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~~--~~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCSP--DSIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSSS--GHHHHHHHHHHHHTTEEEEEESH
T ss_pred hHHHHHHHHcCCCcEEEEcCCCCh--hhhcccchhheeccceeEEEECC
Confidence 456777777666777777543222 34556 88899999998766554
No 431
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=35.90 E-value=38 Score=27.62 Aligned_cols=43 Identities=19% Similarity=0.331 Sum_probs=25.1
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhC
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG 209 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g 209 (358)
.-|.+.|.+.|.+++|.+|.++..+.....-.+.|.++.++..
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 4566778889999999999885432222222456666666654
No 432
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=35.79 E-value=86 Score=22.54 Aligned_cols=45 Identities=9% Similarity=-0.085 Sum_probs=30.3
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEec
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~ 216 (358)
.+...+++++.+.++|++... .+. .-.+.|..+|++++++++.=.
T Consensus 16 ~~~v~kai~~gkaklViiA~D-~~~-~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVAED-ADP-RLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHcCCeeEEEEECC-CCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 355667777667788876532 221 246788899999998876544
No 433
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=35.49 E-value=92 Score=23.74 Aligned_cols=53 Identities=9% Similarity=-0.012 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhC--CEEEEechhh
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG--ALLLCDMAHI 219 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g--~~lvvD~a~~ 219 (358)
....+.+.+.+.+.+|++|.++.........++.+.++.++++ +.+++=..|.
T Consensus 36 ~~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~ 90 (125)
T cd02065 36 DVPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHP 90 (125)
T ss_pred CCCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcC
Confidence 3556777777777789988877554433345667777777774 7777766543
No 434
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=35.15 E-value=96 Score=22.38 Aligned_cols=45 Identities=0% Similarity=-0.048 Sum_probs=30.8
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 171 DKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 171 ~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
+.+.+++++.+.++|++... .+ ..-.+.|.++|+.++++++...+
T Consensus 14 ~~vlkaIk~gkakLViiA~D-a~-~~~~k~i~~~c~~~~Vpv~~~~t 58 (82)
T PRK13601 14 KQTLKAITNCNVLQVYIAKD-AE-EHVTKKIKELCEEKSIKIVYIDT 58 (82)
T ss_pred HHHHHHHHcCCeeEEEEeCC-CC-HHHHHHHHHHHHhCCCCEEEeCC
Confidence 44566676667788876522 22 23467899999999999966554
No 435
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=34.80 E-value=62 Score=25.44 Aligned_cols=45 Identities=20% Similarity=0.102 Sum_probs=23.5
Q ss_pred CCCHHHH----HHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEec
Q 018318 167 YIDYDKL----EEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 167 ~id~~~l----~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~ 216 (358)
.++.+.- ++.+.. ++-+++++... .+-+++.++|++++++++.=.
T Consensus 64 ~l~~~~r~~~l~~l~~~-~~P~iIvt~~~----~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSY-NPPCIIVTRGL----EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp CS-HHHHCCHHHHHCTT-T-S-EEEETTT-------HHHHHHHHHCT--EEEES
T ss_pred HCCHHHHHHHHHHHhCC-CCCEEEEECcC----CCCHHHHHHHHHhCCcEEEcC
Confidence 4666554 444443 44456555331 356899999999999887643
No 436
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=34.75 E-value=92 Score=27.77 Aligned_cols=50 Identities=10% Similarity=-0.103 Sum_probs=40.4
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEe
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCD 215 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD 215 (358)
...++++++++++.....+|.+..+..|...+..+++++|+++|+.++.=
T Consensus 188 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~~~~A~~~gi~~~~~ 237 (265)
T cd03315 188 SAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRVLAVAEALGLPVMVG 237 (265)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHHHHHHHHcCCcEEec
Confidence 45788899998876567888777776777778899999999999888764
No 437
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=34.40 E-value=78 Score=29.10 Aligned_cols=49 Identities=10% Similarity=-0.145 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEe
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCD 215 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD 215 (358)
..++++++++++.....+|.+..+..|...+..+++++|+++|+.++.=
T Consensus 237 ~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~~~~~a~~~gi~~~~~ 285 (316)
T cd03319 237 CFSAADAARLAGGGAYDGINIKLMKTGGLTEALRIADLARAAGLKVMVG 285 (316)
T ss_pred CCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCCEEEE
Confidence 5677888888876556777777777776677889999999999887764
No 438
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=33.68 E-value=2.5e+02 Score=25.91 Aligned_cols=96 Identities=13% Similarity=0.099 Sum_probs=52.9
Q ss_pred ccccCChH--HHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHh
Q 018318 101 VQPYSGSP--ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKAL 178 (358)
Q Consensus 101 v~~~sGt~--a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~ 178 (358)
|.+++|+. +-++ ...+++.|-+|++.+.-..||.. .+ ......++. ....|-+.|++.++
T Consensus 3 iLVtGGAGYIGSHt-v~~Ll~~G~~vvV~DNL~~g~~~---------~v--~~~~~~f~~------gDi~D~~~L~~vf~ 64 (329)
T COG1087 3 VLVTGGAGYIGSHT-VRQLLKTGHEVVVLDNLSNGHKI---------AL--LKLQFKFYE------GDLLDRALLTAVFE 64 (329)
T ss_pred EEEecCcchhHHHH-HHHHHHCCCeEEEEecCCCCCHH---------Hh--hhccCceEE------eccccHHHHHHHHH
Confidence 34455543 4443 34566789899888765554431 11 111012222 22578889999999
Q ss_pred hcCCcEEEE--cCCCCC--Cccc----------hHHHHHHHHHhCCEEEE
Q 018318 179 DFRPKLIIC--GGSAYP--RDWD----------YARFRAVADKCGALLLC 214 (358)
Q Consensus 179 ~~~~~~v~~--~~~~~~--~~~~----------l~~i~~la~~~g~~lvv 214 (358)
++++..|+- .....| ...| .-.|.+.|+++|+.=++
T Consensus 65 ~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~v 114 (329)
T COG1087 65 ENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFI 114 (329)
T ss_pred hcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEE
Confidence 988887752 111111 1222 33677888888865443
No 439
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=33.29 E-value=1.1e+02 Score=27.75 Aligned_cols=48 Identities=21% Similarity=0.196 Sum_probs=33.2
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCC---C---------c--cchHHHHHHHHHhCCEEEE
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYP---R---------D--WDYARFRAVADKCGALLLC 214 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~---~---------~--~~l~~i~~la~~~g~~lvv 214 (358)
.-|++.+++.+++.+|.+||-+...+- . + .-...|+++|++.|+++|-
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 467899999999888998874422111 0 0 1145789999999998753
No 440
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=32.46 E-value=94 Score=29.94 Aligned_cols=48 Identities=10% Similarity=0.159 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCC--CC-----Cccc-------hHHHHHHHHHhCCEEEE
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSA--YP-----RDWD-------YARFRAVADKCGALLLC 214 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~--~~-----~~~~-------l~~i~~la~~~g~~lvv 214 (358)
..+++++.+.+++.+|++++++.-. +. .+.. ..+|.++||+.|+.++.
T Consensus 154 Et~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 154 ETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred hcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4688999999988899998876321 11 1111 34888999999987765
No 441
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=31.96 E-value=2.4e+02 Score=25.25 Aligned_cols=48 Identities=17% Similarity=0.190 Sum_probs=31.5
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCC-CCCccchHHHHHHHHHhCCEEEE
Q 018318 165 TGYIDYDKLEEKALDFRPKLIICGGSA-YPRDWDYARFRAVADKCGALLLC 214 (358)
Q Consensus 165 ~~~id~~~l~~~l~~~~~~~v~~~~~~-~~~~~~l~~i~~la~~~g~~lvv 214 (358)
.|..+.+.+.+.+++++.++|+ +.++ |-... -+-..+.|++.|++.+.
T Consensus 50 ~G~l~~e~l~~~l~e~~i~llI-DATHPyAa~i-S~Na~~aake~gipy~r 98 (257)
T COG2099 50 GGFLGAEGLAAFLREEGIDLLI-DATHPYAARI-SQNAARAAKETGIPYLR 98 (257)
T ss_pred cCcCCHHHHHHHHHHcCCCEEE-ECCChHHHHH-HHHHHHHHHHhCCcEEE
Confidence 5789999999999998888665 5442 21111 13456778877766553
No 442
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=31.18 E-value=61 Score=29.94 Aligned_cols=26 Identities=15% Similarity=0.336 Sum_probs=22.8
Q ss_pred CccchHHHHHHHHHhCCEEEEechhh
Q 018318 194 RDWDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 194 ~~~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
....++++..+|++-++++|.|-.|-
T Consensus 197 k~~sl~evL~lc~e~~iP~v~D~hHh 222 (312)
T TIGR00629 197 VTWTVEDLLPVCEELNIPFVLDFHHH 222 (312)
T ss_pred CcCCHHHHHHHHHhcCCCEEEEhHHh
Confidence 34789999999999999999998764
No 443
>PF13727 CoA_binding_3: CoA-binding domain; PDB: 3NKL_B.
Probab=31.00 E-value=61 Score=26.30 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=28.8
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEE
Q 018318 169 DYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLL 213 (358)
Q Consensus 169 d~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lv 213 (358)
+++++.+.++++..+-|++..+... ...++++.+.|+++++-+.
T Consensus 129 ~~~~l~~~~~~~~id~v~ial~~~~-~~~i~~ii~~~~~~~v~v~ 172 (175)
T PF13727_consen 129 DLDDLPELVREHDIDEVIIALPWSE-EEQIKRIIEELENHGVRVR 172 (175)
T ss_dssp -GGGHHHHHHHHT--EEEE--TTS--HHHHHHHHHHHHTTT-EEE
T ss_pred CHHHHHHHHHhCCCCEEEEEcCccC-HHHHHHHHHHHHhCCCEEE
Confidence 5678888888888887777655433 3468899999999998764
No 444
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=29.94 E-value=3.6e+02 Score=23.16 Aligned_cols=94 Identities=9% Similarity=0.081 Sum_probs=49.9
Q ss_pred hHHHHHHHHhhcCCCCeEEEecCCCCccccccccccCCcccccccceeEEeecccCCCCCCCCHHHHHHHHhhcC----C
Q 018318 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFR----P 182 (358)
Q Consensus 107 t~a~~~~l~a~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~l~~~~----~ 182 (358)
|+.+...+...-..|-+|++..|.....+..+. ..+..|...+.+.++ +..++-+.+.+.. +
T Consensus 18 T~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~------V~Sr~G~~~~A~~i~--------~~~~i~~~i~~~~~~~~~ 83 (201)
T COG1435 18 TEELLRRARRYKEAGMKVLVFKPAIDTRYGVGK------VSSRIGLSSEAVVIP--------SDTDIFDEIAALHEKPPV 83 (201)
T ss_pred hHHHHHHHHHHHHcCCeEEEEecccccccccce------eeeccCCcccceecC--------ChHHHHHHHHhcccCCCc
Confidence 444444444444457777776655433222211 122344433333331 2233333333221 4
Q ss_pred cEEEEcCCCCCCccchHHHHHHHHHhCCEEEE
Q 018318 183 KLIICGGSAYPRDWDYARFRAVADKCGALLLC 214 (358)
Q Consensus 183 ~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvv 214 (358)
..|.++...+-...-+..+.+++.+.|+.|++
T Consensus 84 ~~v~IDEaQF~~~~~v~~l~~lad~lgi~Vi~ 115 (201)
T COG1435 84 DCVLIDEAQFFDEELVYVLNELADRLGIPVIC 115 (201)
T ss_pred CEEEEehhHhCCHHHHHHHHHHHhhcCCEEEE
Confidence 67888877765444577888899888999987
No 445
>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis []. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents CobW-like proteins, including P47K (P31521 from SWISSPROT), a Pseudomonas chlororaphis protein needed for nitrile hydratase expression [], and urease accessory protein UreG, which acts as a chaperone in the activation of urease upon insertion of nickel into the active site [].; PDB: 2WSM_B 1NIJ_A 2HF9_A 2HF8_B.
Probab=29.83 E-value=1.2e+02 Score=25.12 Aligned_cols=102 Identities=15% Similarity=0.147 Sum_probs=48.9
Q ss_pred cCC-hHHHHHHHHhhcCCCCeEEEecCCCCcc-ccccccccCCcccccccceeEEeecccCCCCCCC------CH-HHHH
Q 018318 104 YSG-SPANFAAYTAVLEPHDRIMGLDLPSGGH-LTHGYYTSGGKKISATSIYFESLPYKVNSSTGYI------DY-DKLE 174 (358)
Q Consensus 104 ~sG-t~a~~~~l~a~~~~gd~Vl~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i------d~-~~l~ 174 (358)
.|| |..+..++. ....|.++.+...+++.. +.. ..++..| ..++.+ . +|.+ |+ +.++
T Consensus 10 GsGKTTli~~ll~-~~~~~~~~~vI~ne~g~~~iD~-------~~l~~~~--~~v~~l--~--~gcicc~~~~~~~~~l~ 75 (178)
T PF02492_consen 10 GSGKTTLINHLLK-RNRQGERVAVIVNEFGEVNIDA-------ELLQEDG--VPVVEL--N--NGCICCTLRDDLVEALR 75 (178)
T ss_dssp TSSHHHHHHHHHH-HHTTTS-EEEEECSTTSTHHHH-------HHHHTTT---EEEEE--C--TTTESS-TTS-HHHHHH
T ss_pred CCCHHHHHHHHHH-HhcCCceeEEEEccccccccch-------hhhcccc--eEEEEe--c--CCCcccccHHHHHHHHH
Confidence 456 555555554 445677887777666521 100 0111122 223333 1 3332 22 4455
Q ss_pred HHHhhc--CCcEEEEcCCCCCCccch----HHHHHHHHHhCCEEEEechhh
Q 018318 175 EKALDF--RPKLIICGGSAYPRDWDY----ARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 175 ~~l~~~--~~~~v~~~~~~~~~~~~l----~~i~~la~~~g~~lvvD~a~~ 219 (358)
++++.+ +|..|++..+....+.++ ..+.+.++-..++.++|+.+.
T Consensus 76 ~l~~~~~~~~d~IiIE~sG~a~p~~l~~~~~~~~~~~~~~~iI~vVDa~~~ 126 (178)
T PF02492_consen 76 RLLREYEERPDRIIIETSGLADPAPLILQDPPLKEDFRLDSIITVVDATNF 126 (178)
T ss_dssp HHCCCCHGC-SEEEEEEECSSGGGGHHHHSHHHHHHESESEEEEEEEGTTH
T ss_pred HHHHhcCCCcCEEEECCccccccchhhhccccccccccccceeEEeccccc
Confidence 555555 678888875543334444 222233333468889999754
No 446
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=29.27 E-value=1.1e+02 Score=27.19 Aligned_cols=24 Identities=25% Similarity=0.189 Sum_probs=21.7
Q ss_pred cchHHHHHHHHHhCCEEEEechhh
Q 018318 196 WDYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 196 ~~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
.+.+.+.++.+++++-+++|++|=
T Consensus 53 l~~e~l~~~l~e~~i~llIDATHP 76 (257)
T COG2099 53 LGAEGLAAFLREEGIDLLIDATHP 76 (257)
T ss_pred CCHHHHHHHHHHcCCCEEEECCCh
Confidence 467899999999999999999983
No 447
>PRK02308 uvsE putative UV damage endonuclease; Provisional
Probab=28.79 E-value=1.1e+02 Score=28.04 Aligned_cols=34 Identities=12% Similarity=0.196 Sum_probs=26.0
Q ss_pred EEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhh
Q 018318 185 IICGGSAYPRDWDYARFRAVADKCGALLLCDMAHIS 220 (358)
Q Consensus 185 v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~ 220 (358)
+++.+... ...++++.++|++.++.++.|.+|..
T Consensus 183 L~LEN~~~--~~t~~ell~I~e~~~ipv~~D~hH~~ 216 (303)
T PRK02308 183 LTLENDDK--TYTVEELLYICEKLGIPVVFDYHHHM 216 (303)
T ss_pred EEEeeCCC--CCCHHHHHHHHHHcCCCEEEeHHhhh
Confidence 44554322 27889999999999999999988854
No 448
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=28.62 E-value=1.3e+02 Score=27.64 Aligned_cols=47 Identities=13% Similarity=0.072 Sum_probs=30.6
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
++.+++..++ ..+.+++-.+.++...-.+.+.++|+++|+.++==.|
T Consensus 83 ~~al~e~~~~-Gvk~~vIisaGf~e~g~~~~~~~~ar~~girviGPNc 129 (300)
T PLN00125 83 AAAILEAMEA-ELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNC 129 (300)
T ss_pred HHHHHHHHHc-CCCEEEEECCCCCcccHHHHHHHHHhhcCCEEECCCC
Confidence 5677777764 6776665555565433245666779999988775554
No 449
>PRK11823 DNA repair protein RadA; Provisional
Probab=28.02 E-value=1e+02 Score=30.13 Aligned_cols=47 Identities=11% Similarity=0.133 Sum_probs=31.5
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCCC-------ccc-------hHHHHHHHHHhCCEEEE
Q 018318 168 IDYDKLEEKALDFRPKLIICGGSAYPR-------DWD-------YARFRAVADKCGALLLC 214 (358)
Q Consensus 168 id~~~l~~~l~~~~~~~v~~~~~~~~~-------~~~-------l~~i~~la~~~g~~lvv 214 (358)
-+++.+.+.+++.++++|+++.-.+.. ... +..|.++|+++|+.+++
T Consensus 143 ~~l~~i~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 143 TNLEAILATIEEEKPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred CCHHHHHHHHHhhCCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 467888888877789988887532111 111 23578889999986555
No 450
>cd05564 PTS_IIB_chitobiose_lichenan PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB d
Probab=27.62 E-value=1.1e+02 Score=22.55 Aligned_cols=54 Identities=11% Similarity=0.105 Sum_probs=33.7
Q ss_pred EEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCC
Q 018318 184 LIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH 243 (358)
Q Consensus 184 ~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~ 243 (358)
++++|.+..++-.=++++.+.++++|.-+-++++....+. ......|+++.+++
T Consensus 2 Il~~Cg~G~sTS~~~~ki~~~~~~~~~~~~v~~~~~~~~~------~~~~~~Diil~~Pq 55 (96)
T cd05564 2 ILLVCSAGMSTSILVKKMKKAAEKRGIDAEIEAVPESELE------EYIDDADVVLLGPQ 55 (96)
T ss_pred EEEEcCCCchHHHHHHHHHHHHHHCCCceEEEEecHHHHH------HhcCCCCEEEEChh
Confidence 4555655433222267999999999999888876332221 11236788877766
No 451
>PRK09375 quinolinate synthetase; Provisional
Probab=27.41 E-value=3.6e+02 Score=25.09 Aligned_cols=23 Identities=4% Similarity=-0.009 Sum_probs=14.7
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCC
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGS 190 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~ 190 (358)
.++.++++++.++ .|.++++.+.
T Consensus 106 ~~~~~~i~~lk~~-~p~a~vVaYv 128 (319)
T PRK09375 106 MCPAEEFRAFKEA-HPDATVVTYV 128 (319)
T ss_pred cCCHHHHHHHHHH-CCCCEEEEEe
Confidence 4778888887665 4565555533
No 452
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=27.27 E-value=1.1e+02 Score=27.54 Aligned_cols=57 Identities=16% Similarity=0.280 Sum_probs=37.1
Q ss_pred CC-CCCHHHHHHHHhhc----CCcEEEE-c----CCCCC-CccchHHHHHHHHHhCCEEEEechhhhh
Q 018318 165 TG-YIDYDKLEEKALDF----RPKLIIC-G----GSAYP-RDWDYARFRAVADKCGALLLCDMAHISG 221 (358)
Q Consensus 165 ~~-~id~~~l~~~l~~~----~~~~v~~-~----~~~~~-~~~~l~~i~~la~~~g~~lvvD~a~~~g 221 (358)
+| ..+++++..+.+.. ++.++++ + .++++ ...++..|..+-+.++.++++|..|+.|
T Consensus 141 ~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 141 RGMSATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 44 34787777666432 2455443 2 23343 2346788887777789999999999876
No 453
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=27.01 E-value=1.5e+02 Score=25.68 Aligned_cols=49 Identities=10% Similarity=-0.051 Sum_probs=32.6
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEe
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCD 215 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD 215 (358)
..+++++.+.++.....++.+..+..|...+..+++++|+++|+.+..=
T Consensus 154 ~~~~~~~~~~~~~~~~d~~~~k~~~~GGi~~~~~i~~~a~~~gi~~~~~ 202 (229)
T cd00308 154 VTTVDDALEALELGAVDILQIKPTRVGGLTESRRAADLAEAFGIRVMVH 202 (229)
T ss_pred CCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 3456666666654345666666555666667778888888888877764
No 454
>PRK15452 putative protease; Provisional
Probab=26.96 E-value=1.4e+02 Score=29.14 Aligned_cols=50 Identities=14% Similarity=0.135 Sum_probs=27.1
Q ss_pred CCCHHHHHHHHhh---cCCcEEEEcCCCCCCccchHHHHHHHH---Hh--CCEEEEech
Q 018318 167 YIDYDKLEEKALD---FRPKLIICGGSAYPRDWDYARFRAVAD---KC--GALLLCDMA 217 (358)
Q Consensus 167 ~id~~~l~~~l~~---~~~~~v~~~~~~~~~~~~l~~i~~la~---~~--g~~lvvD~a 217 (358)
.++.++++++++. ...++ .+..+..+...+++.+.+..+ +. +++++-|-.
T Consensus 42 ~f~~edl~eav~~ah~~g~kv-yvt~n~i~~e~el~~~~~~l~~l~~~gvDgvIV~d~G 99 (443)
T PRK15452 42 EFNHENLALGINEAHALGKKF-YVVVNIAPHNAKLKTFIRDLEPVIAMKPDALIMSDPG 99 (443)
T ss_pred CCCHHHHHHHHHHHHHcCCEE-EEEecCcCCHHHHHHHHHHHHHHHhCCCCEEEEcCHH
Confidence 4567788877642 23444 334343444445555554444 33 667887763
No 455
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=26.86 E-value=1.7e+02 Score=27.86 Aligned_cols=46 Identities=22% Similarity=0.156 Sum_probs=28.9
Q ss_pred CCCHHHHHHHHhhcCC-cEEEEcCCCCCCcc-chHHHHHHHHHhCCEEEEec
Q 018318 167 YIDYDKLEEKALDFRP-KLIICGGSAYPRDW-DYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~-~~v~~~~~~~~~~~-~l~~i~~la~~~g~~lvvD~ 216 (358)
.-|++.+++.++...- |.++-+.+ .. +.++++++|++||+.+++=+
T Consensus 200 ~kD~eVLeaaLe~~~G~kpLL~SAt----~e~Ny~~ia~lAk~yg~~Vvv~s 247 (389)
T TIGR00381 200 EKDPLVLEKAAEVAEGERCLLASAN----LDLDYEKIANAAKKYGHVVLSWT 247 (389)
T ss_pred cCCHHHHHHHHHHhCCCCcEEEecC----chhhHHHHHHHHHHhCCeEEEEc
Confidence 4567777666654322 33332222 12 68899999999999887744
No 456
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=26.76 E-value=1.4e+02 Score=22.47 Aligned_cols=54 Identities=7% Similarity=0.001 Sum_probs=33.2
Q ss_pred EEEEcCCCCCCccchHHHHHHHHHhCCEEEEechhhhhhhhccccCCCCCcccEEEecCC
Q 018318 184 LIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH 243 (358)
Q Consensus 184 ~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a~~~g~~~~~~~~~~~~~~d~~~~s~~ 243 (358)
++++|....++..=.+++.+.|+++|+-+-+.++-..- .....+++|++..+++
T Consensus 3 Ill~C~~GaSSs~la~km~~~a~~~gi~~~i~a~~~~e------~~~~~~~~Dvill~PQ 56 (99)
T cd05565 3 VLVLCAGGGTSGLLANALNKGAKERGVPLEAAAGAYGS------HYDMIPDYDLVILAPQ 56 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeeHHH------HHHhccCCCEEEEcCh
Confidence 45556443333233689999999999988777652221 1122347788777665
No 457
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=26.72 E-value=1.9e+02 Score=27.94 Aligned_cols=106 Identities=13% Similarity=0.096 Sum_probs=0.0
Q ss_pred ccccccCChHHHHHHHHhhcC---------CCCeEEEecCCCCccc-cccccccCCcccc--cccceeEEee-cccCCCC
Q 018318 99 VNVQPYSGSPANFAAYTAVLE---------PHDRIMGLDLPSGGHL-THGYYTSGGKKIS--ATSIYFESLP-YKVNSST 165 (358)
Q Consensus 99 ~~v~~~sGt~a~~~~l~a~~~---------~gd~Vl~~~~~~~~~~-~~~~~~~~~~~~~--~~g~~~~~~~-~~~~~~~ 165 (358)
..++++++.......+.-+.. +||.|+...+.-+|.. .... ..+. +...++++.. +.+ .
T Consensus 288 ~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~~h~---S 359 (422)
T TIGR00649 288 YLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVS-----ILLDIRLNEVGARVIKRIHV---S 359 (422)
T ss_pred EEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHH-----HHHHHHHHhcCCEEEeceEe---c
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCC----EEEEe
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGA----LLLCD 215 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~----~lvvD 215 (358)
++-+.++++.+++.-+|+.++ |..|....+...++++++.|+ .++.+
T Consensus 360 gHa~~~dl~~~i~~~~Pk~~i---pvHge~~~~~~~~~~a~~~g~~~~~~~~~~ 410 (422)
T TIGR00649 360 GHASQEDHKLLLRLLKPKYII---PVHGEYRMLINHTKLAEEEGYPGENIFILR 410 (422)
T ss_pred CCCCHHHHHHHHHHhCCCEEE---ecCCcHHHHHHHHHHHHHcCCCcccEEEec
No 458
>PRK06683 hypothetical protein; Provisional
Probab=26.47 E-value=1.3e+02 Score=21.56 Aligned_cols=45 Identities=7% Similarity=-0.215 Sum_probs=29.9
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 171 DKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 171 ~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
+...+.+++.+.++|++... .+ ..-.+.|.++|+.++++++.-.+
T Consensus 17 ~~v~kaik~gkaklViiA~D-a~-~~~~~~i~~~~~~~~Vpv~~~~t 61 (82)
T PRK06683 17 KRTLEAIKNGIVKEVVIAED-AD-MRLTHVIIRTALQHNIPITKVES 61 (82)
T ss_pred HHHHHHHHcCCeeEEEEECC-CC-HHHHHHHHHHHHhcCCCEEEECC
Confidence 44566676667788877522 11 12357889999999998866553
No 459
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=26.43 E-value=69 Score=32.63 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=25.0
Q ss_pred CCCCCccchHHHHHHHHHhCCEEEEechh
Q 018318 190 SAYPRDWDYARFRAVADKCGALLLCDMAH 218 (358)
Q Consensus 190 ~~~~~~~~l~~i~~la~~~g~~lvvD~a~ 218 (358)
+.+|++.+++++.+-||++|+-||+|-..
T Consensus 208 sryGtPedfk~fVD~aH~~GIgViLD~V~ 236 (628)
T COG0296 208 SRYGTPEDFKALVDAAHQAGIGVILDWVP 236 (628)
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEecC
Confidence 34666778999999999999999999973
No 460
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=25.80 E-value=1.2e+02 Score=27.42 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCcc---chHHHHHHHHHhCCEE
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDW---DYARFRAVADKCGALL 212 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~---~l~~i~~la~~~g~~l 212 (358)
.-|++.+.++++. ...-|+++.|..+... -.+++.++||.+|+.|
T Consensus 79 ~~~~~~i~~ai~~-GftSVMiD~S~l~~eeNi~~t~~vv~~ah~~gv~V 126 (276)
T cd00947 79 GSSFELIKRAIRA-GFSSVMIDGSHLPFEENVAKTKEVVELAHAYGVSV 126 (276)
T ss_pred CCCHHHHHHHHHh-CCCEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 3588999999975 6666788988877433 3468999999999765
No 461
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=25.62 E-value=47 Score=30.44 Aligned_cols=26 Identities=8% Similarity=0.142 Sum_probs=21.2
Q ss_pred cchHHHHHHH-HHhCCEEEEechhhhh
Q 018318 196 WDYARFRAVA-DKCGALLLCDMAHISG 221 (358)
Q Consensus 196 ~~l~~i~~la-~~~g~~lvvD~a~~~g 221 (358)
.-++.|.+.| +.++.++|.||||.+.
T Consensus 159 sRl~ql~~W~g~dfdgvivfDEcH~ak 185 (303)
T PF13872_consen 159 SRLDQLVDWCGEDFDGVIVFDECHKAK 185 (303)
T ss_pred chHHHHHHHHhcCCCceEEeccchhcC
Confidence 3478888888 5578899999999764
No 462
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=25.44 E-value=1.4e+02 Score=27.13 Aligned_cols=52 Identities=15% Similarity=0.250 Sum_probs=39.5
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCcc---chHHHHHHHHHhCCEEEEechhh
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDW---DYARFRAVADKCGALLLCDMAHI 219 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~---~l~~i~~la~~~g~~lvvD~a~~ 219 (358)
.-|++.++++++. ....|.+..++.+... -.+++.++||++|+.+=.|.-|.
T Consensus 84 ~~~~e~i~~Al~~-G~tsVm~d~s~~~~~eni~~t~~v~~~a~~~gv~veaE~ghl 138 (281)
T PRK06806 84 GMTFEKIKEALEI-GFTSVMFDGSHLPLEENIQKTKEIVELAKQYGATVEAEIGRV 138 (281)
T ss_pred CCCHHHHHHHHHc-CCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeE
Confidence 3588999999975 7788888888766322 34689999999999986666553
No 463
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=25.32 E-value=1.8e+02 Score=21.87 Aligned_cols=43 Identities=7% Similarity=-0.021 Sum_probs=28.7
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEE
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLC 214 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvv 214 (358)
.+-++.+++. + +-|++.-|......+.++|.++|+++|..+.+
T Consensus 76 ~~~~~~~l~~-g-~~v~~EKP~~~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 76 AEIAKKALEA-G-KHVLVEKPLALTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp HHHHHHHHHT-T-SEEEEESSSSSSHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHc-C-CEEEEEcCCcCCHHHHHHHHHHHHHhCCEEEE
Confidence 4455666653 3 24566666555566788888888888887766
No 464
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=25.30 E-value=1.3e+02 Score=28.62 Aligned_cols=47 Identities=11% Similarity=0.121 Sum_probs=31.9
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCC-------Ccc-------chHHHHHHHHHhCCEEEE
Q 018318 168 IDYDKLEEKALDFRPKLIICGGSAYP-------RDW-------DYARFRAVADKCGALLLC 214 (358)
Q Consensus 168 id~~~l~~~l~~~~~~~v~~~~~~~~-------~~~-------~l~~i~~la~~~g~~lvv 214 (358)
.+++.+.+.+++.++++|+++.-.+- ... -+..|.++++++|+.+++
T Consensus 145 ~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 145 TNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred CcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 56888888888778999888742211 011 134577899999987655
No 465
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=25.19 E-value=62 Score=23.38 Aligned_cols=20 Identities=25% Similarity=0.270 Sum_probs=18.2
Q ss_pred hHHHHHHHHHhCCEEEEech
Q 018318 198 YARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 198 l~~i~~la~~~g~~lvvD~a 217 (358)
-++|.++|+++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 46999999999999999985
No 466
>PLN00196 alpha-amylase; Provisional
Probab=25.17 E-value=60 Score=31.53 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=24.2
Q ss_pred CCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 190 SAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 190 ~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
+.+|+..+++++.+-||++|+.||+|.+
T Consensus 86 ~~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 86 SKYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4566667899999999999999999986
No 467
>PRK04296 thymidine kinase; Provisional
Probab=25.02 E-value=4.1e+02 Score=22.23 Aligned_cols=36 Identities=11% Similarity=0.231 Sum_probs=24.6
Q ss_pred CCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEec
Q 018318 181 RPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 181 ~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~ 216 (358)
++.+|+++...+-....+.++.+.++..|+.+++=+
T Consensus 78 ~~dvviIDEaq~l~~~~v~~l~~~l~~~g~~vi~tg 113 (190)
T PRK04296 78 KIDCVLIDEAQFLDKEQVVQLAEVLDDLGIPVICYG 113 (190)
T ss_pred CCCEEEEEccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 567888886655333336677788788898887744
No 468
>PRK04452 acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional
Probab=24.99 E-value=1.5e+02 Score=27.45 Aligned_cols=46 Identities=17% Similarity=0.160 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHhhcCC-cEEEEcCCCCCCccchHHHHHHHHHhCCEEEEec
Q 018318 167 YIDYDKLEEKALDFRP-KLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~-~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~ 216 (358)
..|++.+++.++..+- +.++-+.+ ...++++.++|++||+.+++=.
T Consensus 136 ~kD~evleaale~~~g~~pLInSat----~en~~~i~~lA~~y~~~Vva~s 182 (319)
T PRK04452 136 EKDAEVLEKVAEAAEGERCLLGSAE----EDNYKKIAAAAMAYGHAVIAWS 182 (319)
T ss_pred CCCHHHHHHHHHHhCCCCCEEEECC----HHHHHHHHHHHHHhCCeEEEEc
Confidence 5688888888865432 33443322 2258899999999998877643
No 469
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=24.53 E-value=1.6e+02 Score=26.91 Aligned_cols=46 Identities=20% Similarity=0.273 Sum_probs=30.5
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
++.+++..++ ..+.+++-.+.++.. +-++|.++|+++|+.++==.|
T Consensus 77 ~~~l~e~~~~-Gvk~avIis~Gf~e~-~~~~l~~~a~~~girilGPNc 122 (286)
T TIGR01019 77 ADAIFEAIDA-GIELIVCITEGIPVH-DMLKVKRYMEESGTRLIGPNC 122 (286)
T ss_pred HHHHHHHHHC-CCCEEEEECCCCCHH-HHHHHHHHHHHcCCEEECCCC
Confidence 5666776654 666665544545432 347999999999988875554
No 470
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=24.51 E-value=97 Score=25.76 Aligned_cols=45 Identities=13% Similarity=0.279 Sum_probs=24.2
Q ss_pred HHHHHHHHhh-cCCcEEEEcCCC---CCCc-------cchHHHHHHHHHhCCEEEE
Q 018318 170 YDKLEEKALD-FRPKLIICGGSA---YPRD-------WDYARFRAVADKCGALLLC 214 (358)
Q Consensus 170 ~~~l~~~l~~-~~~~~v~~~~~~---~~~~-------~~l~~i~~la~~~g~~lvv 214 (358)
++.+++.+++ +++++|++++-. .+.. .-+..+.++|+++|+.+++
T Consensus 129 ~~~l~~~~~~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKELYGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhcCCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4667777776 568888887321 1111 1245778888999877654
No 471
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=24.32 E-value=1.2e+02 Score=26.76 Aligned_cols=39 Identities=23% Similarity=0.457 Sum_probs=26.8
Q ss_pred CCcEEEEc-CCCCCC---ccchHHHHHHHHHhCCEEEEechhhh
Q 018318 181 RPKLIICG-GSAYPR---DWDYARFRAVADKCGALLLCDMAHIS 220 (358)
Q Consensus 181 ~~~~v~~~-~~~~~~---~~~l~~i~~la~~~g~~lvvD~a~~~ 220 (358)
+++++.+. .+++|+ +.|+..+. +-++.|+++|.|++|+.
T Consensus 159 n~~v~lcERG~sFGYnnLV~DMrsl~-iM~~~~~PViFDaTHSv 201 (279)
T COG2877 159 NNKVILCERGASFGYNNLVVDMRSLP-IMKEFGAPVIFDATHSV 201 (279)
T ss_pred CCcEEEEeccCccCcchhHHHhhhhH-HHHHcCCCeEEecccce
Confidence 45655553 356774 34666654 56788999999999985
No 472
>PRK04169 geranylgeranylglyceryl phosphate synthase-like protein; Reviewed
Probab=24.28 E-value=2.1e+02 Score=25.19 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=35.3
Q ss_pred ccCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEE
Q 018318 160 KVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLC 214 (358)
Q Consensus 160 ~~~~~~~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvv 214 (358)
.+|+ +...+-+.++..++ ..+.+++++.|..-+...+.++.+.+|+++++++.
T Consensus 13 liDP-~k~~~~~~~~~~~~-~gtdai~vGGS~~vt~~~~~~~v~~ik~~~lPvil 65 (232)
T PRK04169 13 LLDP-DKPLPDEALEAICE-SGTDAIIVGGSDGVTEENVDELVKAIKEYDLPVIL 65 (232)
T ss_pred EECC-CCCCCHHHHHHHHh-cCCCEEEEcCCCccchHHHHHHHHHHhcCCCCEEE
Confidence 3453 33444566655544 47888988877654545678888888888888776
No 473
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=24.15 E-value=1.4e+02 Score=26.72 Aligned_cols=45 Identities=16% Similarity=0.125 Sum_probs=30.6
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
.+.+++.+. +..+++++.+ .+...++.++.+.+++++..+++|..
T Consensus 83 ~~~~~~~~~--~~davvig~G-l~~~~~~~~l~~~~~~~~~pvVlDa~ 127 (272)
T TIGR00196 83 VDEDEELLE--RYDVVVIGPG-LGQDPSFKKAVEEVLELDKPVVLDAD 127 (272)
T ss_pred HHHHHhhhc--cCCEEEEcCC-CCCCHHHHHHHHHHHhcCCCEEEEhH
Confidence 455555553 3467776643 33333478889999999999999975
No 474
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=24.06 E-value=1.4e+02 Score=26.80 Aligned_cols=46 Identities=17% Similarity=0.146 Sum_probs=31.9
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCC---c-cchHHHHHHHHHhCCEEEEech
Q 018318 169 DYDKLEEKALDFRPKLIICGGSAYPR---D-WDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 169 d~~~l~~~l~~~~~~~v~~~~~~~~~---~-~~l~~i~~la~~~g~~lvvD~a 217 (358)
+.+.+++++. |-.+|+++ |.-|. . -.+++|.+.+++.++++|+|+-
T Consensus 91 av~~i~k~L~--RlhavVIG-PGLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLLQ--RLHAVVIG-PGLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHHh--heeEEEEC-CCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 4566666665 44566666 44442 1 2477888999999999999985
No 475
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=23.84 E-value=1.8e+02 Score=21.66 Aligned_cols=42 Identities=14% Similarity=0.056 Sum_probs=28.5
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEE
Q 018318 171 DKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLC 214 (358)
Q Consensus 171 ~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvv 214 (358)
+.+.+.+++.+.++|++... .+. .-.+.+..+|++++++++.
T Consensus 22 ~~v~kai~~gkaklViiA~D-~~~-~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 22 KRTIKAIKLGKAKLVIVASN-CPK-DIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHcCCceEEEEeCC-CCH-HHHHHHHHHHHHcCCCEEE
Confidence 45666676656788877532 332 2357888999999999755
No 476
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=23.75 E-value=1.5e+02 Score=28.83 Aligned_cols=42 Identities=14% Similarity=-0.069 Sum_probs=17.7
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCE
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGAL 211 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~ 211 (358)
++.+++.++..-..+|.+..+..|...+..+++++|+++|+.
T Consensus 318 ~~~~~~~i~~~a~d~v~ik~~~iGGItea~~ia~lA~~~Gi~ 359 (425)
T TIGR01060 318 TEILREGIEMGVANSILIKPNQIGTLTETLDAVELAKKAGYT 359 (425)
T ss_pred HHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCc
Confidence 334444433322233333333333334444555555555554
No 477
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=23.48 E-value=2.5e+02 Score=21.50 Aligned_cols=41 Identities=12% Similarity=0.061 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 171 DKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 171 ~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
+.+++..+. .++.+++... ..-+++.++|+++|+.++-..|
T Consensus 70 ~~v~~~~~~-g~~~v~~~~g-----~~~~~~~~~a~~~gi~vigp~C 110 (116)
T PF13380_consen 70 EIVDEAAAL-GVKAVWLQPG-----AESEELIEAAREAGIRVIGPNC 110 (116)
T ss_dssp HHHHHHHHH-T-SEEEE-TT-----S--HHHHHHHHHTT-EEEESS-
T ss_pred HHHHHHHHc-CCCEEEEEcc-----hHHHHHHHHHHHcCCEEEeCCc
Confidence 445555443 6777776544 3457999999999999887775
No 478
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=23.47 E-value=1.7e+02 Score=27.22 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=26.5
Q ss_pred HHHHHHHHhhcCCcEEEEcCCC--CCC---c----------------cchHHHHHHHHHhCCEEEE
Q 018318 170 YDKLEEKALDFRPKLIICGGSA--YPR---D----------------WDYARFRAVADKCGALLLC 214 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~--~~~---~----------------~~l~~i~~la~~~g~~lvv 214 (358)
++.++.+++...+++|+++... .+. . .-+..|..+++++|+.+++
T Consensus 122 l~~~~~li~~~~~~lIVIDSv~al~~~~E~e~~~g~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi~ 187 (321)
T TIGR02012 122 LEIAETLVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSKSNTTAIF 187 (321)
T ss_pred HHHHHHHhhccCCcEEEEcchhhhccchhhcccccccchhHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 3445555555568888876432 211 0 1234577778899988776
No 479
>PRK08185 hypothetical protein; Provisional
Probab=23.32 E-value=1.4e+02 Score=27.19 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCcc---chHHHHHHHHHhCCEE
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDW---DYARFRAVADKCGALL 212 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~---~l~~i~~la~~~g~~l 212 (358)
..|++.++++++. ...-|+++.+..+... -..++.++||.+|+.|
T Consensus 78 g~~~e~i~~ai~~-Gf~SVM~D~S~l~~eeNi~~t~~vv~~a~~~gv~v 125 (283)
T PRK08185 78 GATIEDVMRAIRC-GFTSVMIDGSLLPYEENVALTKEVVELAHKVGVSV 125 (283)
T ss_pred CCCHHHHHHHHHc-CCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 4589999999975 6667888888777432 2458899999999888
No 480
>COG0163 UbiX 3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme metabolism]
Probab=23.24 E-value=2.3e+02 Score=24.05 Aligned_cols=64 Identities=16% Similarity=0.173 Sum_probs=45.5
Q ss_pred hcceeEeccCCCCCHHHHHHHhcccccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCC
Q 018318 31 CRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDP 94 (358)
Q Consensus 31 ~~~~~l~a~~~~~~~~V~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~le~~~~~~la~~~g~~~ 94 (358)
++.+.+.+=|++++.--++.|.+.......--.+...||..++.++++...+..++-..||.+.
T Consensus 117 rR~LVLv~REtPl~~ihLeNMlkl~~~GaiI~Pp~PaFY~~P~sieDlvd~~v~rvLD~lgI~~ 180 (191)
T COG0163 117 RRPLVLVPRETPLSLIHLENMLKLAEMGAIIMPPMPAFYHKPQSIEDLVDFVVGRVLDLLGIEH 180 (191)
T ss_pred CCceEEEeccCCccHHHHHHHHHHHHCCCEecCCChhhhcCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 4678888899999988888776543222111122334677888888888888888999999976
No 481
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase. This model represents geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The active enzyme is reported to be a homopentamer in Methanobacterium thermoautotrophicum but is reported to be a homodimer in Thermoplasma acidophilum.
Probab=23.22 E-value=1.7e+02 Score=25.28 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=26.9
Q ss_pred HHhhcCCcEEEEcCCCCCCccchHHHHHHHHH-hCCEEEE
Q 018318 176 KALDFRPKLIICGGSAYPRDWDYARFRAVADK-CGALLLC 214 (358)
Q Consensus 176 ~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~-~g~~lvv 214 (358)
.+.+..+.+++++.|..-....+.++.+.+|+ +++++++
T Consensus 19 ~v~~~gtDaI~VGGS~gvt~~~~~~~v~~ik~~~~lPvil 58 (205)
T TIGR01769 19 NAKDAGTDAIMVGGSLGIVESNLDQTVKKIKKITNLPVIL 58 (205)
T ss_pred HHHhcCCCEEEEcCcCCCCHHHHHHHHHHHHhhcCCCEEE
Confidence 44444578888886643344567888888888 5788876
No 482
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=23.17 E-value=1.6e+02 Score=27.57 Aligned_cols=51 Identities=8% Similarity=-0.102 Sum_probs=37.1
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEec
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~ 216 (358)
...++++++++++.....+|.+.....|...+..+++++|+++|+.+++=+
T Consensus 248 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~i~~~a~~~g~~~~~~~ 298 (357)
T cd03316 248 NLYTRWEFRDLLEAGAVDIIQPDVTKVGGITEAKKIAALAEAHGVRVAPHG 298 (357)
T ss_pred ccccHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeccC
Confidence 356788888888754456666665556656677899999999998876543
No 483
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial. A deep split separates two families of GMP reductase. The other (TIGR01305) is found in eukaryotic and some proteobacterial lineages, including E. coli, while this family is found in a variety of bacterial lineages.
Probab=23.07 E-value=1.3e+02 Score=28.02 Aligned_cols=41 Identities=10% Similarity=0.050 Sum_probs=17.5
Q ss_pred HHHHHHHHhhcC--CcEEEEcCCCCCCccchHHHHHHHHHhCCE
Q 018318 170 YDKLEEKALDFR--PKLIICGGSAYPRDWDYARFRAVADKCGAL 211 (358)
Q Consensus 170 ~~~l~~~l~~~~--~~~v~~~~~~~~~~~~l~~i~~la~~~g~~ 211 (358)
.+.+..+++. . +.+|+++.++.-...=++.|..+.+.+..+
T Consensus 96 ~~r~~~lv~a-~~~~d~i~~D~ahg~s~~~~~~i~~i~~~~p~~ 138 (321)
T TIGR01306 96 YEFVTQLAEE-ALTPEYITIDIAHGHSNSVINMIKHIKTHLPDS 138 (321)
T ss_pred HHHHHHHHhc-CCCCCEEEEeCccCchHHHHHHHHHHHHhCCCC
Confidence 3444444432 2 345555543322222244455555555433
No 484
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=22.73 E-value=3.7e+02 Score=23.89 Aligned_cols=46 Identities=20% Similarity=0.146 Sum_probs=30.6
Q ss_pred CCC-CHHHHHHHHhhcCCcEEEEcCCCCCCccch-HHHHHHHHHhCCEEE
Q 018318 166 GYI-DYDKLEEKALDFRPKLIICGGSAYPRDWDY-ARFRAVADKCGALLL 213 (358)
Q Consensus 166 ~~i-d~~~l~~~l~~~~~~~v~~~~~~~~~~~~l-~~i~~la~~~g~~lv 213 (358)
|.+ |.+.+++.+++++.++|+ +.++ |....+ +.+.+.|++.|+..+
T Consensus 49 G~l~~~~~l~~~l~~~~i~~VI-DATH-PfA~~is~~a~~ac~~~~ipyi 96 (248)
T PRK08057 49 GGFGGAEGLAAYLREEGIDLVI-DATH-PYAAQISANAAAACRALGIPYL 96 (248)
T ss_pred CCCCCHHHHHHHHHHCCCCEEE-ECCC-ccHHHHHHHHHHHHHHhCCcEE
Confidence 567 999999999988888765 6442 221122 456677887765543
No 485
>TIGR03677 rpl7ae 50S ribosomal protein L7Ae. Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs. Interacts with protein L15e.
Probab=22.66 E-value=2e+02 Score=22.20 Aligned_cols=46 Identities=13% Similarity=0.131 Sum_probs=30.4
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccc-hHHHHHHHHHhCCEEEEech
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWD-YARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~-l~~i~~la~~~g~~lvvD~a 217 (358)
.+.+.+++++.+.++|++.....+ .+ .+.+..+|++++++++.-..
T Consensus 31 ~~~v~kaikkgka~LVilA~D~s~--~~~~~~i~~lc~~~~Ip~~~~~s 77 (117)
T TIGR03677 31 TNEVTKAVERGIAKLVVIAEDVEP--PEIVAHLPALCEEKGIPYVYVKK 77 (117)
T ss_pred HHHHHHHHHcCCccEEEEeCCCCc--HHHHHHHHHHHHHcCCCEEEeCC
Confidence 456677777666788877533222 22 47888899999988665543
No 486
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=22.65 E-value=1.5e+02 Score=27.01 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCcc---chHHHHHHHHHhCCEE
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDW---DYARFRAVADKCGALL 212 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~---~l~~i~~la~~~g~~l 212 (358)
..|++.++++++. ...-|+++.|..+... -.+++.++||.+|+.|
T Consensus 84 ~~~~e~i~~Ai~~-GftSVM~DgS~l~~eeNi~~T~~vve~Ah~~gv~V 131 (283)
T PRK07998 84 GKTFEDVKQAVRA-GFTSVMIDGAALPFEENIAFTKEAVDFAKSYGVPV 131 (283)
T ss_pred CCCHHHHHHHHHc-CCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 3588999999865 5556777888777432 3569999999999875
No 487
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=22.45 E-value=2.2e+02 Score=21.75 Aligned_cols=45 Identities=16% Similarity=0.285 Sum_probs=30.1
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEE
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLL 213 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lv 213 (358)
..+|.+.+-+.+++.....+ ++.++....-.++++.|.++|+.++
T Consensus 59 ~yl~~e~I~~ia~~~g~~~i---~pGyg~lse~~~fa~~~~~~gi~fi 103 (110)
T PF00289_consen 59 SYLNIEAIIDIARKEGADAI---HPGYGFLSENAEFAEACEDAGIIFI 103 (110)
T ss_dssp TTTSHHHHHHHHHHTTESEE---ESTSSTTTTHHHHHHHHHHTT-EES
T ss_pred hhccHHHHhhHhhhhcCccc---ccccchhHHHHHHHHHHHHCCCEEE
Confidence 35899999998877543332 3556544445788888888887664
No 488
>PRK09354 recA recombinase A; Provisional
Probab=22.40 E-value=1.9e+02 Score=27.31 Aligned_cols=44 Identities=11% Similarity=0.167 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCcEEEEcCCC--CCC---c----------------cchHHHHHHHHHhCCEEEE
Q 018318 171 DKLEEKALDFRPKLIICGGSA--YPR---D----------------WDYARFRAVADKCGALLLC 214 (358)
Q Consensus 171 ~~l~~~l~~~~~~~v~~~~~~--~~~---~----------------~~l~~i~~la~~~g~~lvv 214 (358)
+.++.++++..+++|+++... .+. . .-+..|..+++++|+.+++
T Consensus 128 ~i~~~li~s~~~~lIVIDSvaaL~~~~E~eg~~gd~~~~~qar~ms~~Lr~L~~~l~k~~itvI~ 192 (349)
T PRK09354 128 EIADTLVRSGAVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNISKSNTTVIF 192 (349)
T ss_pred HHHHHHhhcCCCCEEEEeChhhhcchhhhcCCccccchhHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 445555555568888887432 221 0 0145677788999988776
No 489
>TIGR01502 B_methylAsp_ase methylaspartate ammonia-lyase. This model describes methylaspartate ammonia-lyase, also called beta-methylaspartase (EC 4.3.1.2). It follows methylaspartate mutase (composed of S and E subunits) in one of several possible pathways of glutamate fermentation.
Probab=22.37 E-value=2.3e+02 Score=27.35 Aligned_cols=51 Identities=6% Similarity=-0.190 Sum_probs=40.3
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEec
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~ 216 (358)
...++++++++++..-..+|-+..+..|.+.+..++.++|+.+|+.+.+-+
T Consensus 305 s~~t~~d~~~~i~~~a~d~v~iK~~k~GGIt~a~kia~lA~~~Gi~~~~g~ 355 (408)
T TIGR01502 305 WCNTVEDVKFFTDAKAGHMVQIKTPDVGGVNNIARAIMYCKANGMGAYVGG 355 (408)
T ss_pred CCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 466789999988764567777777777777788999999999999888753
No 490
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=22.36 E-value=1.5e+02 Score=27.03 Aligned_cols=45 Identities=11% Similarity=0.031 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccc---hHHHHHHHHHhCCEE
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWD---YARFRAVADKCGALL 212 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~---l~~i~~la~~~g~~l 212 (358)
.-|++.+.++++. ...-|+++.|..+.... .+++.++||.+|+.|
T Consensus 87 g~~~e~i~~ai~~-GftSVM~DgS~lp~eeNi~~Trevv~~Ah~~gv~V 134 (285)
T PRK07709 87 GSSFEKCKEAIDA-GFTSVMIDASHHPFEENVETTKKVVEYAHARNVSV 134 (285)
T ss_pred CCCHHHHHHHHHc-CCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 3589999999975 55567789888774333 469999999999765
No 491
>PRK00077 eno enolase; Provisional
Probab=22.34 E-value=1.8e+02 Score=28.24 Aligned_cols=44 Identities=9% Similarity=-0.036 Sum_probs=21.5
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEE
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLL 213 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lv 213 (358)
++.+++.++..-...|.+.....|...+..+++++|+.+|..++
T Consensus 317 ~~~~~~~i~~~a~d~v~ik~~~~GGitea~~ia~lA~~~gi~~~ 360 (425)
T PRK00077 317 TKRLKKGIEKGAANSILIKVNQIGTLTETLDAIELAKRAGYTAV 360 (425)
T ss_pred HHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEE
Confidence 44444444432334444444444444455566666666665444
No 492
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=22.31 E-value=2.2e+02 Score=25.39 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=17.7
Q ss_pred chHHHHHHHHHhCCEEEEechh
Q 018318 197 DYARFRAVADKCGALLLCDMAH 218 (358)
Q Consensus 197 ~l~~i~~la~~~g~~lvvD~a~ 218 (358)
+.+.+.++++++++-.|+|++|
T Consensus 54 ~~~~l~~~l~~~~i~~vIDATH 75 (249)
T PF02571_consen 54 DEEGLAEFLRENGIDAVIDATH 75 (249)
T ss_pred CHHHHHHHHHhCCCcEEEECCC
Confidence 6678888888888888888877
No 493
>PRK07315 fructose-bisphosphate aldolase; Provisional
Probab=22.24 E-value=1.5e+02 Score=27.08 Aligned_cols=43 Identities=19% Similarity=0.070 Sum_probs=34.5
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCcc---chHHHHHHHHHhCCEE
Q 018318 169 DYDKLEEKALDFRPKLIICGGSAYPRDW---DYARFRAVADKCGALL 212 (358)
Q Consensus 169 d~~~l~~~l~~~~~~~v~~~~~~~~~~~---~l~~i~~la~~~g~~l 212 (358)
|++.++++++. ....|.+..++.+... -.+++.++|+.+|+.|
T Consensus 88 ~~~~i~~ai~~-GftSVm~d~S~l~~eEni~~t~~v~~~a~~~gv~v 133 (293)
T PRK07315 88 HYEDALECIEV-GYTSIMFDGSHLPVEENLKLAKEVVEKAHAKGISV 133 (293)
T ss_pred CHHHHHHHHHc-CCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 88999999974 7778888888777432 3468999999999988
No 494
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=22.19 E-value=3.7e+02 Score=24.00 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=27.9
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccch-HHHHHHHHHhCCEE
Q 018318 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDY-ARFRAVADKCGALL 212 (358)
Q Consensus 166 ~~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~l-~~i~~la~~~g~~l 212 (358)
+.+|.+.+++.+.++++++|+ +.++ |....+ +-+.+.|++.|+..
T Consensus 50 g~l~~~~l~~~l~~~~i~~VI-DAtH-PfA~~is~~a~~a~~~~~ipy 95 (256)
T TIGR00715 50 GALDPQELREFLKRHSIDILV-DATH-PFAAQITTNATAVCKELGIPY 95 (256)
T ss_pred CCCCHHHHHHHHHhcCCCEEE-EcCC-HHHHHHHHHHHHHHHHhCCcE
Confidence 468889999999888888765 4332 111111 35566777766543
No 495
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=22.13 E-value=1.9e+02 Score=26.49 Aligned_cols=46 Identities=20% Similarity=0.204 Sum_probs=30.2
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEech
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD~a 217 (358)
++.+++..++ ..|.+++-.+.++. .+-++|.++|+++|+.++==.|
T Consensus 79 ~~~l~e~~~~-gvk~avI~s~Gf~~-~~~~~l~~~a~~~girvlGPNc 124 (291)
T PRK05678 79 ADAILEAIDA-GIDLIVCITEGIPV-LDMLEVKAYLERKKTRLIGPNC 124 (291)
T ss_pred HHHHHHHHHC-CCCEEEEECCCCCH-HHHHHHHHHHHHcCCEEECCCC
Confidence 5667776654 67765554444542 2234899999999988875554
No 496
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=22.08 E-value=1.5e+02 Score=27.00 Aligned_cols=45 Identities=13% Similarity=0.086 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccc---hHHHHHHHHHhCCEE
Q 018318 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWD---YARFRAVADKCGALL 212 (358)
Q Consensus 167 ~id~~~l~~~l~~~~~~~v~~~~~~~~~~~~---l~~i~~la~~~g~~l 212 (358)
.-|++.++++++. .-.-|+++.|..+.... .+++.++||.+|+.|
T Consensus 87 g~~~e~i~~ai~~-GftSVM~DgS~l~~eeNi~~T~~vve~Ah~~gv~V 134 (286)
T PRK08610 87 GSSFEKCKEAIDA-GFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSV 134 (286)
T ss_pred CCCHHHHHHHHHc-CCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 3489999999875 55567788888775333 458999999999765
No 497
>PRK04175 rpl7ae 50S ribosomal protein L7Ae; Validated
Probab=21.94 E-value=2.1e+02 Score=22.38 Aligned_cols=46 Identities=9% Similarity=0.035 Sum_probs=30.7
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccc-hHHHHHHHHHhCCEEEEech
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWD-YARFRAVADKCGALLLCDMA 217 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~-l~~i~~la~~~g~~lvvD~a 217 (358)
.+.+.+++++.+.++|++.....+ .+ .+.+..+|+++++.++.-..
T Consensus 35 ~~~v~kaikkgkakLVilA~D~s~--~~i~~~~~~lc~~~~Vp~~~~~t 81 (122)
T PRK04175 35 TNETTKAVERGIAKLVVIAEDVDP--EEIVAHLPLLCEEKKIPYVYVPS 81 (122)
T ss_pred HHHHHHHHHcCCccEEEEeCCCCh--HHHHHHHHHHHHHcCCCEEEECC
Confidence 355667777656788877533222 23 36889999999988766554
No 498
>PLN00191 enolase
Probab=21.87 E-value=1.9e+02 Score=28.38 Aligned_cols=45 Identities=2% Similarity=-0.080 Sum_probs=21.4
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEE
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLC 214 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvv 214 (358)
++++++.+++.-...|.+.....|...+..+++++|+++|..+++
T Consensus 349 ~~~l~~~I~~~aad~i~iKl~qiGGITea~~~a~lA~~~G~~~~i 393 (457)
T PLN00191 349 PKRVAKAIQEKACNALLLKVNQIGTVTESIEAVKMSKAAGWGVMT 393 (457)
T ss_pred HHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHCCCEEEe
Confidence 444444443322333434433344444455566666666665554
No 499
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=21.78 E-value=3.6e+02 Score=21.33 Aligned_cols=46 Identities=11% Similarity=0.067 Sum_probs=27.9
Q ss_pred CHHHHHHHHhhcCCcEEEE---cCC---CCC----------CccchHHHHHHHHHhCCEEEE
Q 018318 169 DYDKLEEKALDFRPKLIIC---GGS---AYP----------RDWDYARFRAVADKCGALLLC 214 (358)
Q Consensus 169 d~~~l~~~l~~~~~~~v~~---~~~---~~~----------~~~~l~~i~~la~~~g~~lvv 214 (358)
|++.+.+.+++-+...+++ ++. .+| ...-+.++.+.||+.|+-+++
T Consensus 1 D~~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~~Dllge~v~a~h~~Girv~a 62 (132)
T PF14871_consen 1 DPEQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLKRDLLGEQVEACHERGIRVPA 62 (132)
T ss_pred CHHHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCCcCHHHHHHHHHHHCCCEEEE
Confidence 5666767776655554443 110 111 122368999999999988765
No 500
>PTZ00106 60S ribosomal protein L30; Provisional
Probab=21.56 E-value=1.9e+02 Score=22.12 Aligned_cols=44 Identities=11% Similarity=-0.018 Sum_probs=29.4
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccchHHHHHHHHHhCCEEEEe
Q 018318 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCD 215 (358)
Q Consensus 170 ~~~l~~~l~~~~~~~v~~~~~~~~~~~~l~~i~~la~~~g~~lvvD 215 (358)
.+.+.+++++.+.++|++... .+ ..-.+.|...|+.++++++..
T Consensus 30 ~~~vlkalk~gkaklViiA~D-~~-~~~kkki~~~~~~~~Vpv~~~ 73 (108)
T PTZ00106 30 TKSTLKALRNGKAKLVIISNN-CP-PIRRSEIEYYAMLSKTGVHHY 73 (108)
T ss_pred HHHHHHHHHcCCeeEEEEeCC-CC-HHHHHHHHHHHhhcCCCEEEe
Confidence 355666676656788876522 22 123578889999999998753
Done!